Funded Research

Archived Content

Please note this webpage is being maintained as an archive and will not be updated on a regular basis.

**Big Data to Knowledge (BD2K) Community-Based Data and Metadata Standards Efforts (R24) RFA-ES-16-010**
PI Name	Institution Name	Title
DEUTSCH, ERIC	INSTITUTE FOR SYSTEMS BIOLOGY	Advancing data and metadata standards for proteomics mass spectra
PETERS, BJOERN (contact) MUNGALL, CHRISTOPHER J	LA JOLLA INST FOR ALLERGY & IMMUNOLGY	Services to support the OBO foundry standards
SIM, IDA	UNIVERSITY OF CALIFORNIA, SAN FRANCISCO	Open mHealth: Community-Based Data and Metadata Standards for Mobile Health

BD2K Support for Meetings of Data Science Related Organizations (U13) RFA-CA-16-020
PI Name	Institution Name	Title
HAENDEL, MELISSA A (contact) ROBINSON, PETER NICHOLAS	OREGON HEALTH & SCIENCE UNIVERSITY	Forums for Integrative Phenomics

BD2K Research Education Curriculum Development: Data Science Overview for Biomedical Scientists (R25) RFA-ES-16-011
PI Name	Institution Name	Title
SARKAR, INDRA NEIL (contact) BROCK, JEFFREY GATSONIS, CONSTANTINE A ISTRAIL, SORIN C. SANDSTEDE, BJORN	BROWN UNIVERSITY	Training and Teaching for Transforming Big Data to Knowledge

BD2K Enhancing Diversity in Biomedical Data Science (R25) RFA-MD-16-002
PI Name	Institution Name	Title
BAI, YONGSHENG (contact) COOMBES, KEVIN ROBERT HUANG, KUN	INDIANA STATE UNIVERSITY	BD4ISU: Big Data for Indiana State University
GIANNOPOULOU, EVGENIA (contact) PATHAK, JYOTISHMAN	NEW YORK CITY COLLEGE OF TECHNOLOGY	City Tech-WCM Big Data Training Program in Biomedical Informatics
MARQUEZ-MAGANA, LETICIA MARIA (contact) AKOM, ANTWI AARON	SAN FRANCISCO STATE UNIVERSITY	HEART & SOUL: Enabling full representation in biomedical Big Data science

Big Data to Knowledge (BD2K) Enhancing the Efficiency and Effectiveness of Digital Data Curation for Biomedical Big Data (U01) RFA-LM-17-001
PI Name	Institution Name	Title
HADLEY, DEXTER D	UNIVERSITY OF CALIFORNIA, SAN FRANCISCO	Crowd-Assisted Deep Learning (CrADLe) Digital Curation to Translate Big Data into Precision Medicine
SCHÜRER, STEPHAN C (contact) BUNIN, BARRY A MUSEN, MARK A	UNIVERSITY OF MIAMI SCHOOL OF MEDICINE	Unifying Templates, Ontologies and Tools to Achieve Effective Annotation of Bioassay Protocols
STERNBERG, PAUL WARREN (contact) SCHEDL, TIM	CALIFORNIA INSTITUTE OF TECHNOLOGY	Streamlined capture and curation of unpublished data

BD2K Mentored Career Development Award in Biomedical Big Data Science for Clinicians and Doctorally Prepared Scientists (K01) RFA-ES-16-002
PI Name	Institution Name	Title
CHEN, BIN	UNIVERSITY OF CALIFORNIA, SAN FRANCISCO	Integrating transcriptomic, proteomic and pharmacogenomic data to inform individualized therapy in cancers
MELAMED, RACHEL DANIA	UNIVERSITY OF CHICAGO	Using clinical data to identify FDA-approved drugs for cancer prevention and therapeutic repurposing
SUL, JAE HOON	UNIVERSITY OF CALIFORNIA LOS ANGELES	A computational genomics approach to identify roles of rare genetic variants in psychiatric disorders and gene expression

BD2K Open Educational Resources for Skills Development in Biomedical Big Data Science (R25) RFA-HG-16-016
PI Name	Institution Name	Title
COOK, DIANE JOYCE	WASHINGTON STATE UNIVERSITY	Development of an Online Course Suite in Tools for Analysis of Sensor-Based Behavioral Health Data (AHA!)

Big Data to Knowledge (BD2K) Development of Software Tools and Methods for Biomedical Big Data in Targeted Areas of High Need (U01) RFA-CA-15-017
PI Name	Institution Name	Title
CAMPBELL, WALTER SCOTT	UNIVERSITY OF NEBRASKA MEDICAL CENTER	Deploying ONC national Standards in Support of Metadata for Big Data Research Warehouse Management of Repurposed Laboratory, Pathology & Patient Findings Data From the EHR.
CLARK, TIMOTHY W	MASSACHUSETTS GENERAL HOSPITAL	Argumentation and linked-metadata services for reproducible target validation
JIANG, GUOQIAN	MAYO CLINIC ROCHESTER	Tools for standardizing clinical research metadata using HL7 FHIR
GERSTEIN, MARK BENDER	YALE UNIVERSITY	Methods and Software to Enhance Genomic Privacy and Sharing of RNA-Seq Data
MUNGALL, CHRISTOPHER J	UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB	An Intelligent Concept Agent for Assisting with the Application of Metadata
STELLING, JOHN	BRIGHAM AND WOMEN'S HOSPITAL	Integrating the worlds microbiology laboratories into a global microbial surveillance system
TANG, HAIXU T. (contact) WANG, XIAOFENG	INDIANA UNIVERSITY BLOOMINGTON	Encryption methods and software for privacy-preserving analysis of biomedical data
TAO, CUI	UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON	Metadata applications on informed content to facilitate biorepository data regulation and sharing
TOH, DARREN	HARVARD PILGRIM HEALTH CARE, INC.	Privacy-protecting distributed analysis of biomedical big data
TROPSHA, ALEXANDER	UNIV OF NORTH CAROLINA CHAPEL HILL	Drug Repurposing for Cancer Therapy: From Man to Molecules to Man

Big Data to Knowledge (BD2K) Advancing Biomedical Science Using Crowdsourcing and Interactive Digital Media (UH2) RFA-CA-15-006
PI Name	Institution Name	Title
ANDERSON, ALEXANDER ROBERTSON ALLAN	H. LEE MOFFITT CANCER CTR & RES INST	Crowdsourcing optimal cancer treatment strategies that maximize efficacy and minimize toxicity
COOPER, SETH EVERETT (contact) KHATIB, FIRAS	NORTHEASTERN UNIVERSITY	Applying Protein Databases to Crowdsourcing Structural Protein Design
FABBRI, DANIEL	VANDERBILT UNIVERSITY	Crowd Sourcing Labels From Electronic Medical Records to Enable Biomedical Research
HADLEY, DEXTER D	UNIVERSITY OF CALIFORNIA, SAN FRANCISCO	Crowd-sourcing A STAR Functional Genomic Characterization of Cancer with Open Big Data
INTILLE, STEPHEN S	NORTHEASTERN UNIVERSITY	Crowd-Sourced Annotation of Longitudinal Sensor Data to Enhance Data-Driven Precision Medicine for Behavioral Health
IWASA, JANET	UNIVERSITY OF UTAH	Quorum: An Open Platform for Crowdsourcing Visual Data Analysis
MURALI, T. M. (contact) LUTHER, KURT	VIRGINIA POLYTECHNIC INST AND ST UNIV	GraphCrowd: Using Crowdsourced Design to Visualize Effects of Environmental Chemicals on Signaling Networks
SEUNG, HYUNJUNE SEBASTIAN (contact) ROBINSON, AMY	PRINCETON UNIVERSITY	Retinal connectome: mobile game and crowdsourcing algorithms for EyeWire II
WALLACE, BYRON CASEY (contact) IVES, ZACHARY NENKOVA, ANI	UNIVERSITY OF TEXAS, AUSTIN	Crowdsourcing Mark-up of the Medical Literature to Support Evidence-Based Medicine and Develop Automated Annotation Capabilities
YOSHIDA, HIROYUKI	MASSACHUSETTS GENERAL HOSPITAL	Crowdsourcing-aided machine learning for colon cancer prevention

Courses for Skills Development in Biomedical Big Data Science (R25) RFA-HG-14-008
PI Name	Institution Name	Title
CHUANG, JEFFREY HSU-MIN	THE JACKSON LABORATORY	Big Genomic Data Skills Training for Professors
FOWLKES, CHARLESS (contact) DIGMAN, MICHELLE	UNIVERSITY OF CALIFORNIA-IRVINE	The Big DIPA: Data Image Processing and Analysis
HOFFMANN, ALEXANDER (contact) PAPP, JEANETTE CHRISTINE	UNIVERSITY OF CALIFORNIA LOS ANGELES	NGS Data Analysis Skills for the Biosciences Pipeline
KOVATCH, PATRICIA (contact) DUDLEY, JOEL THOMAS HANSS, BASIL G	ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI	Community Research Education and Engagement for Data Science (CREEDS)
MUKHERJEE, BHRAMAR (contact) JOHNSON, TIMOTHY D MOZAFARI, BARZAN NGUYEN, LONG	UNIVERSITY OF MICHIGAN	Transforming Analytical Learning in the Era of Big Data
OWZAR, KOUROS (contact) CHAN, CLIBURN C	DUKE UNIVERSITY	A Hands-on, Integrative Next-Generation Sequencing Course: Design, Experiment, and Analysis
RECHT, MICHAEL P (contact) BRAITHWAITE, RONALD SCOTT	NEW YORK UNIVERSITY SCHOOL OF MEDICINE	Discovering the Value of Imaging: A Collaborative Training Program in Comparative Effectiveness for the Field of Radiology
SAMORE, MATTHEW H	UNIVERSITY OF UTAH	Curriculum in Biomedical Big Data: Skill Development and Hands-On Training
SHAW, JOSEPH R.	MOUNT DESERT ISLAND BIOLOGICAL LAB	Establishing a Network of Skilled BD2K Practitioners: The Summer Workshop on Population-Scale Genomic Studies of Environmental Stress
VITEK, OLGA	NORTHEASTERN UNIVERSITY	Summer School: Big Data and Statistics for Bench Scientists
ZHANG, MIN	PURDUE UNIVERSITY	Big Data Training for Translational Omics Research

Biomedical Data Science Training Coordination Center (U24) RFA-ES-15-004
PI Name	Institution Name	Title
VAN HORN, JOHN DARRELL	UNIVERSITY OF SOUTHERN CALIFORNIA	Big Data U: Empowering Modern Biomedicine via Personalized Training

NIH Big Data to Knowledge (BD2K) Initiative Research Education: Massive Open Online Course (MOOC) on Data Management for Biomedical Big Data (R25) RFA-LM-15-001
PI Name	Institution Name	Title
HADDAD, BASSEM R (contact) GUSEV, YURIY MCGARVEY, PETER	GEORGETOWN UNIVERSITY	Demystifying Biomedical Big Data: A User’s Guide
MARTIN, ELAINE R	UNIV OF MASSACHUSETTS MED SCH WORCESTER	Development of a Best Practices in Research Data Management Massive Open Online Course (MOOC)

NIH Big Data to Knowledge (BD2K) Enhancing Diversity in Biomedical Data Science (R25) RFA-MD-15-005
PI Name	Institution Name	Title
CANNER, JUDITH ELENA	UNIVERSITY CORPORATION AT MONTEREY BAY	Innovative Research Education and Articulation in the Preparation of Under-represented and First Generation Students for Careers in Biomedical Big Data Science
GARCIA-ARRARAS, JOSE E (contact) ORDONEZ-FRANCO, PATRICIA PÉREZ, MARIA-EGLEE	UNIVERSITY OF PUERTO RICO RIO PIEDRAS	Increasing Diversity in Interdisciplinary BD2K (IDI-BD2K)
MCELIGOT, ARCHANA J	CSU FULLERTON AUXILIARY SERVICES CORPORATION	Big Data Discovery and Diversity through Research Education Advancement and Partnerships (BD3-REAP)
QIAN, LEI	FISK UNIVERSITY	Fisk University/UIUC-Mayo KnowENG BD2K Center R25 Partnership

NIH Big Data to Knowledge (BD2K) Initiative Research Education: Open Educational Resources for Sharing, Annotating and Curating Biomedical Big Data (R25) RFA-LM-15-002
PI Name	Institution Name	Title
LAWSON, CATHERINE L	RUTGERS, THE STATE UNIV OF N.J.	Enabling Data Science in Biology
SEYMOUR, ANNE (contact) LEHMANN, HAROLD P	JOHNS HOPKINS UNIVERSITY	Training & Tools for Informationists to Facilitate Sharing of Next Generation Sequencing Data
SURKIS, ALISA (contact) READ, KEVIN	NEW YORK UNIVERSITY SCHOOL OF MEDICINE	Preparing Medical Librarians to Understand and Teach Research Data Management

Development of Software and Analysis Methods for Biomedical Big Data in Targeted Areas of High Need (U01) RFA-HG-14-020
PI Name	Institution Name	Title
BILGIN, ALI	UNIVERSITY OF ARIZONA	Task-Specific Compression for Biomedical Big Data
DONG, HONG-WEI	UNIVERSITY OF SOUTHERN CALIFORNIA	From Terabytes of Pixels to Intuitive Brain Networks
HUANG, ERICH S.	DUKE UNIVERSITY	Flexible & Executable Provenance in Data-Intensive Biomedical Research: A Flexible Research Data Service
IVES, ZACHARY(contact) KIM, JUNHYONG	UNIVERSITY OF PENNSYLVANIA	Approximating and Reasoning about Data Provenance
KOYUTURK, MEHMET	CASE WESTERN RESERVE UNIVERSITY	Theoretical Foundations and Software Infrastructure for Biological Network Databases
MADHAVAN, SUBHA	GEORGETOWN UNIVERSITY	MACE2K - Molecular And Clinical Extraction: A Natural Language Processing Tool for Personalized Medicine
MILENKOVIC, OLGICA (contact) WEISSMAN, TSACHY	UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN	Genomic Compression: From Information Theory to Parallel Algorithms
MINOR, WLADEK	UNIVERSITY OF VIRGINIA	Integrated resource for reproducibility in macromolecular crystallography
NOVEMBRE, JOHN	THE UNIVERSITY OF CHICAGO	Tools for Visualization of Geographic Structure in Population Genomic Data
PARK, PETER J	PRESIDENT & FELLOWS OF HARVARD COLLEGE	Visual Analysis of Genomic and Clinical Data from Large Patient Cohorts
PICONE, JOSEPH (contact) HARABAGIU, SANDA MARIA OBEID, IYAD	TEMPLE UNIV OF THE COMMONWEALTH	Automatic discovery and processing of EEG cohorts from clinical records
ROSE, PETER W	UNIVERSITY OF CALIFORNIA SAN DIEGO	Compressive Structural BioInformatics: High Efficiency 3D Structure Compression
SAHOO, SATYA SANKET	CASE WESTERN RESERVE UNIVERSITY	A PROV standard-based data source agnostic provenance engine for Big Data analytics
SCHLIEP, ALEXANDER	RUTGERS, THE STATE UNIVERSITY OF NEW JERSEY	Meaningful Data Compression and Reduction of High-Throughput Sequencing Data
WANG, WEI (contact) CONDIE, TYSON YOUNG, SEAN	UNIVERSITY OF CALIFORNIA LOS ANGELES	Mining the Social Web to Monitor Public Health and HIV Risk Behaviors
WEBER, GRIFFIN M	PRESIDENT & FELLOWS OF HARVARD COLLEGE	Visualizing healthcare system dynamics in biomedical Big Data
WU, CHUNLEI	THE SCRIPPS RESEARCH INSTITUTE	Community Platform for Data Wrangling of Gene and Genetic Variant Annotations
ZHU, JUN	ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI	Developing methods for curating multi-omics data

Revisions to Add Biomedical Big Data Training to Active NLM Institutional Training Grants in Biomedical Informatics (T15) RFA-HG-14-006
PI Name	Institution Name	Title
HRIPCSAK, GEORGE M.	COLUMBIA UNIVERSITY	Training in Biomedical Informatics at Columbia University
PAYNE, PHILIP R.O. (contact) CATALYUREK, UMIT V.	OHIO STATE UNIVERSITY	MIDAs: Multi-modeling and Integrative Data Analytics Training Program

Predoctoral Training in Biomedical Big Data Science (T32) RFA-HG-14-004
PI Name	Institution Name	Title
ALTMAN, RUSS BIAGIO	STANFORD UNIVERSITY	Biomedical Data Science Graduate Training at Stanford
AMOS, CHRISTOPHER I	DARTMOUTH COLLEGE	Quantitative Biomedical Sciences at Dartmouth
DANIELS, MICHAEL J (contact) DHILLON, INDERJIT MEYERS, LAUREN ANCEL	UNIVERSITY OF TEXAS, AUSTIN	PREDOCTORAL TRAINING IN BIOMEDICAL BIG DATA SCIENCE
KOSOROK, MICHAEL R (contact) FOREST, MARK GREGORY	UNIV OF NORTH CAROLINA CHAPEL HILL	Big Data to Knowledge Training Program
MALIN, BRADLEY A. (contact) BLUME, JEFFREY GADD, CYNTHIA S	VANDERBILT UNIVERSITY	BIDS: Vanderbilt Training Program in BIg Biomedical Data Science
NEWTON, MICHAEL A (contact) DEWEY, COLIN NOEL GOULD, MICHAEL N	UNIVERSITY OF WISCONSIN-MADISON	Bio-Data Science Training Program
NOBLE, WILLIAM STAFFORD (contact) DANIEL, THOMAS L. FAIRHALL, ADRIENNE L WITTEN, DANIELA	UNIVERSITY OF WASHINGTON	University of Washington PhD Training in Big Data for Genomics and Neuroscience
PAPIN, JASON (contact) BROWN, DONALD E LOUGHRAN, THOMAS PATRICK SKADRON, KEVIN	UNIVERSITY OF VIRGINIA	Transdisciplinary Big Data Science Training at UVA
PELLEGRINI, MATTEO	UNIVERSITY OF CALIFORNIA LOS ANGELES	Biomedical Big Data Training Grant
QUACKENBUSH, JOHN	HARVARD SCHOOL OF PUBLIC HEALTH	Statistical and Quantitative Training in Big Data Health Science
RITCHIE, MARYLYN D. (contact) HONAVAR, VASANT G. LI, RUNZE	PENNSYLVANIA STATE UNIVERSITY-UNIV PARK	Penn State Biomedical Big Data to Knowledge (B2D2K) Training Program
SHYU, CHI-REN	UNIVERSITY OF MISSOURI-COLUMBIA	Massive and Complex Data Analytics Pre-Doctoral Training in One Health
STARREN, JUSTIN B. (contact) KLABJAN, DIEGO	NORTHWESTERN UNIVERSITY	Predoctoral Training Program in Biomedical Data Driven Discovery (BD3)
VANDERLAAN, MARK J (contact) JORDAN, MICHAEL NIELSEN, RASMUS	UNIVERSITY OF CALIFORNIA BERKELEY	Biomedical Big Data Training Program at UC Berkeley

Open Educational Resources for Biomedical Big Data (R25) RFA-HG-14-009
PI Name	Institution Name	Title
AMARO, ROMMIE E (contact) ALTINTAS DE CALLAFON, ILKAY	UNIVERSITY OF CALIFORNIA SAN DIEGO	AN OPEN RESOURCE FOR COLLABORATIVE BIOMEDICAL BIG DATA TRAINING
BOHLAND, JASON W (contact) EDEN, URI TZVI KRAMER, MARK ALAN	BOSTON UNIVERSITY	An open, online course in neuronal data analysis for the practicing neuroscientist
CAFFO, BRIAN SCOTT	JOHNS HOPKINS UNIVERSITY	Big Data education for the masses: MOOCs, modules, & intelligent tutoring systems
CHURCHILL, GARY A	JACKSON LABORATORY	Curriculum Development and Training for Systems Genetics
ELGIN, SARAH C.R.	GEORGE WASHINGTON UNIVERSITY	A Genome Browser On-Ramp to Engage Biologists with Big Data
HERSH, WILLIAM R (contact) HAENDEL, MELISSA A MCWEENEY, SHANNON K.	OREGON HEALTH & SCIENCE UNIVERSITY	Adding Big Data Open Educational Resources to the ONC Health IT Curriculum
IRIZARRY, RAFAEL ANGEL	HARVARD SCHOOL OF PUBLIC HEALTH	Biomedical Data Science Online Curriculum on HarvardX
LEE, CHRISTOPHER	UNIVERSITY OF CALIFORNIA LOS ANGELES	The BD2K Concept Network: open sharing of active-learning and tools online
PEVZNER, PAVEL A	UNIVERSITY OF CALIFORNIA SAN DIEGO	Integrated Active Learning Framework for Biomedical BD2K

Courses for Skills Development in Biomedical Big Data Science (R25) RFA-HG-14-008
PI Name	Institution Name	Title
CHUANG, JEFFREY HSU-MIN	THE JACKSON LABORATORY	Big Genomic Data Skills Training for Professors
DORR, DAVID A. (contact) HAENDEL, MELISSA A MCWEENEY, SHANNON K.	OREGON HEALTH & SCIENCE UNIVERSITY	OHSU Informatics Analytics BD2K Skill Course
FOWLKES, CHARLESS (contact) DIGMAN, MICHELLE	UNIVERSITY OF CALIFORNIA-IRVINE	The Big DIPA: Data Image Processing and Analysis
HOFFMANN, ALEXANDER (contact) PAPP, JEANETTE CHRISTINE	UNIVERSITY OF CALIFORNIA LOS ANGELES	NGS Data Analysis Skills for the Biosciences Pipeline
KOVATCH, PATRICIA (contact) DUDLEY, JOEL THOMAS HANSS, BASIL G	ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI	Community Research Education and Engagement for Data Science (CREEDS)
MUKHERJEE, BHRAMAR (contact) JOHNSON, TIMOTHY D MOZAFARI, BARZAN NGUYEN, LONG	UNIVERSITY OF MICHIGAN	Transforming Analytical Learning in the Era of Big Data
PATHAK, JYOTISHMAN (contact) CHUTE, CHRISTOPHER G NEUHAUSER, CLAUDIA M.	MAYO CLINIC ROCHESTER	Big Data Coursework for Computational Medicine
RECHT, MICHAEL P (contact) BRAITHWAITE, RONALD SCOTT	NEW YORK UNIVERSITY SCHOOL OF MEDICINE	Discovering the Value of Imaging: A Collaborative Training Program in Comparative Effectiveness for the Field of Radiology
SHAW, JOSEPH R.	MOUNT DESERT ISLAND BIOLOGICAL LAB	Establishing a Network of Skilled BD2K Practitioners: The Summer Workshop on Population-Scale Genomic Studies of Environmental Stress
SHOJAIE, ALI (contact) WITTEN, DANIELA	UNIVERSITY OF WASHINGTON	Summer Institute for Statistics of Big Data
ZHANG, MIN	PURDUE UNIVERSITY	Big Data Training for Translational Omics Research

Mentored Career Development Award in Biomedical Big Data Science for Clinicians and Doctorally Prepared Scientists (K01) RFA-HG-14-007
PI Name	Institution Name	Title
AVANTS, BRIAN	UNIVERSITY OF PENNSYLVANIA	Imaging genomics bases of pediatric executive functioning
CALLCUT, RACHAEL A	UNIVERSITY OF CALIFORNIA, SAN FRANCISCO	Advancing Outcome Metrics in Trauma Surgery Through Utilization of Big Data
CHEN, JONATHAN HAILIN	STANFORD UNIVERSITY	Data-Mining Clinical Decision Support from Electronic Health Records
COFFMAN, DONNA LYN	PENNSYLVANIA STATE UNIVERSITY-UNIV PARK	Novel Methods to Identify Momentary Risk States for Stress & Physical Inactivity
FARHAT, MAHA	MASSACHUSETTS GENERAL HOSPITAL	New Tools for the interpretation of Pathogen Genomic Data with a focus on Mycobacterium
GARMIRE, LANA X	UNIVERSITY OF HAWAII AT MANOA	An Integrative Bioinformatics Approach to Study Single Cancer Cell Heterogeneity
GLISKE, STEPHEN V	UNIVERSITY OF MICHIGAN	Epileptic biomarkers and big data: identifying brain regions to resect in patients with refractory epilepsy
ITAKURA, HARUKA	STANFORD UNIVERSITY	Multi-scale data integration frameworks to improve cancer outcomes
JOHNSON, MICHAEL HIROSHI	JOHNS HOPKINS UNIVERSITY	Molecular Analysis and Precision Medicine in Renal Cell Carcinoma
LANDAU, DAN	DANA-FARBER CANCER INST	The role of epigenetic heterogeneity in CLL evolution
NEMATI, SHAMIM	EMORY UNIVERSITY	Deep Learning and Streaming Analytics for Prediction of Adverse Events in the ICU
LEE, GEORGE	CASE WESTERN RESERVE UNIVERSITY	Big data convergence of pathology and omics for disease prognosis
NGUYEN, QUYNH	UNIVERSITY OF UTAH	HashtagHealth: A Social Media Big Data Resource for Neighborhood Effects Research
NSOESIE, ELAINE O.	CHILDREN'S HOSPITAL CORPORATION	A Framework for Integrating Multiple Data Sources for Modeling and Forecasting of Infectious Diseases
PAGUIRIGAN, AMY	FRED HUTCHINSON CANCER RESEARCH CENTER	Connecting Single Cell Heterogeneity to Clinical Descriptors of Clonal Evolution in Acute Myeloid Leukemia
PARK, SOOJIN	COLUMBIA UNIVERSITY HEALTH SCIENCES	Multiparametric Prediction of Vasospasm after Subarachnoid Hemorrhage
PEARSON, JOHN	DUKE UNIVERSITY	Nonparametric Bayes Methods for Big Data in Neuroscience
PROKOP, JEREMY	HUDSON-ALPHA INSTITUTE FOR BIOTECHNOLOGY	Using a Sequence-to-Structure-to-Function Approach to Functionally Characterize Protein Coding Missense Mutations in the Human and Rat Genomes
SCHMITT, JAMES E	UNIVERSITY OF PENNSYLVANIA	INGOT: a family of statistical computing algorithms for hypothesis-driven imaging genomic and longitudinal neuroimaging analysis
VAN PANHUIS, WILLEM GIJSBERT	UNIVERSITY OF PITTSBURGH	Data integration for global population health through dynamic models
WAGENAAR, JOOST B	UNIVERSITY OF PENNSYLVANIA	Developing Cloud-based tools for Big Neural Data

BD2K-LINCS-Perturbation Data Coordination and Integration Center (DCIC) (U54) RFA-HG-14-001
PI Name	Institution Name	Title
GOLUB, TODD R. (contact) SUBRAMANIAN, ARAVIND	THE BROAD INSTITUTE, INC.	LINCS Data Coordination and Integration Center
MA'AYAN, AVI (contact) MEDVEDOVIC, MARIO SCHURER, STEPHAN C	ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI	Data Coordination and Integration Center for LINCS-BD2K

Development of an NIH Data Discovery Index Coordination Consortium (U24) RFA-HL-14-031
PI Name	Institution Name	Title
OHNO-MACHADO, LUCILA	UNIVERSITY OF CALIFORNIA SAN DIEGO	BioCADDIE: Biomedical and healthCAre Data Discovery and Indexing Engine center

Centers of Excellence for Big Data Computing in the Biomedical Sciences (U54) RFA-HG-13-009
PI Name	Institution Name	Title
COOPER, GREGORY F. (contact) BAHAR, IVET BERG, JEREMY M	UNIVERSITY OF PITTSBURGH AT PITTSBURGH	Center for causal Modeling and discovery of Biomedical Knowledge from Big Data
CRAVEN, MARK W	UNIVERSITY OF WISCONSIN-MADISON	The Center for Predictive Computational Phenotyping-1 Overall
DELP, SCOTT L	STANFORD UNIVERSITY	Mobility Data Integration to Insight
HAN, JIAWEI (contact) SINHA, SAURABH SONG, JUN S WEINSHILBOUM, RICHARD M.	UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN	KnowEng, a Scalable Knowledge Engine for Large-Scale Genomic Data-OVERALL
HAUSSLER, DAVID H (contact) PATTERSON, DAVID VAN 'T VEER, LAURA J.	UNIVERSITY OF CALIFORNIA SANTA CRUZ	Center for Big Data in Translational Genomics
KOHANE, ISAAC S	HARVARD MEDICAL SCHOOL	Patient-Centered Information Commons
KUMAR, SANTOSH	UNIVERSITY OF MEMPHIS	Center of Excellence for Mobile Sensor Data-to-Knowledge (MD2K) - OVERALL
MUSEN, MARK A	STANFORD UNIVERSITY	Center for Expanded Data Annotation and Retrieval (CEDAR) - Overall
PING, PEIPEI (contact) LINDSEY, MERRY L SU, ANDREW I WATSON, KAROL E	UNIVERSITY OF CALIFORNIA LOS ANGELES	A Community Effort to Translate Protein Data to Knowledge: An Integrated Platform
THOMPSON, PAUL M	UNIVERSITY OF SOUTHERN CALIFORNIA	ENIGMA Center for Worldwide Medicine, Imaging & Genomics
TOGA, ARTHUR W	UNIVERSITY OF SOUTHERN CALIFORNIA	Big Data for Discovery Science

Archived Content

Big Data to Knowledge (BD2K)

Big Data to Knowledge (BD2K)

Funded Research