The Human BioMolecular Atlas Program (HuBMAP)
The Human BioMolecular Atlas Program (HuBMAP)
Funded Research
| PI Name | Institution Name | Title |
|---|---|---|
| GUPTA, RAJAT M (contact) SEGRE, AYELLET VERED | BRIGHAM AND WOMEN'S HOSPITAL | Identifying the organotypic and disease-specific vascular cell populations by integrating single cell data with polygenic risk |
| LARONDA, MONICA M | LURIE CHILDREN'S HOSPITAL OF CHICAGO | Reverse Engineering the Extracellular Neighborhood to Support the Functional Tissue Unit: A Use Case to Restore Ovarian Function |
| NABA, ALEXANDRA (contact) GAO, YU | UNIVERSITY OF ILLINOIS AT CHICAGO | Thinking outside the cell: Leveraging HuBMAP data to build the human ECM atlas |
| PEI, LIMING (contact) WALLACE, DOUGLAS C XING, YI | CHILDREN'S HOSP OF PHILADELPHIA | Novel biological insights by utilizing mitochondrial genome information from HuBMAP resources |
| PI Name | Institution Name | Title |
|---|---|---|
| FAN, RONG | YALE UNIVERSITY | High-spatial-resolution ECM-inclusive multi-omics sequencing of human PFA and FFPE tissue slides |
| PASA-TOLIC, LJILJANA | BATTELLE PACIFIC NORTHWEST LABORATORIES | Spatially resolved characterization of proteoforms for functional proteomics |
| SHI, TUJIN (contact) | BATTELLE PACIFIC NORTHWEST LABORATORIES | A streamlined platform for phosphoproteome mapping of human tissues |
| STOCKWELL, BRENT R (contact), TIAN, HUA | COLUMBIA UNIV NEW YORK MORNINGSIDE | Multimodal mass spectrometry imaging of mouse and human liver |
| ZHONG, SHENG | UNIVERSITY OF CALIFORNIA, SAN DIEGO | Spatial in situ mapping of RNA-chromatin interactions at transcriptome-and-genome scale in human tissues |
| PI Name | Institution Name | Title |
|---|---|---|
| GINTY, FIONA | GENERAL ELECTRIC GLOBAL RESEARCH CTR | Multi-Scale 3-D Image Analytics for High Dimensional Spatial Mapping of Normal Tissues |
| ANGELO, ROBERT MICHAEL (contact) BENDALL, SEAN CURTIS | STANFORD UNIVERSITY | A robust platform for multiplexed, subcellular proteomic imaging in human tissue |
| KELLEHER, NEIL L | NORTHWESTERN UNIVERSITY | Renewable and Specific Affinity Reagents for Mapping Proteoforms in Human Tissues |
| MACOSKO, EVAN Z | BROAD INSTITUTE, INC. | Implementation of Slide-seq for high-resolution, whole-transcriptome human tissue maps. |
| PI Name | Institution Name | Title |
|---|---|---|
| CAI, LONG (contact) YUAN, GUO-CHENG | CALIFORNIA INSTITUTE OF TECHNOLOGY | In situ transcriptome profiling in single cells |
| HARBURY, PEHR A (contact) DESAI, TUSHAR JASUBHAI | STANFORD UNIVERSITY | Next-Generation Genomic Imaging Technology |
| LASKIN, JULIA | PURDUE UNIVERSITY | Novel Platform for Quantitative Subcellular Resolution Imaging of Human Tissues Using Mass Spectrometry |
| YIN, PENG | HARVARD UNIVERSITY | High-Throughput, Highly Multiplexed In Situ Proteomic Imaging of Human Tissues |
| PI Name | Institution Name | Title |
|---|---|---|
| ATKINSON, MARK A. (contact) BODENMILLER, BERND NICK, HARRY S | UNIVERSITY OF FLORIDA | A 3D Tissue Map of the Human Lymphatic System |
| CAI, LONG (contact) SHENDURE, JAY ASHOK TRAPNELL, BRUCE COLSTON | CALIFORNIA INSTITUTE OF TECHNOLOGY | A Spatially Resolved Molecular Atlas of Human Endothelium |
| CAPRIOLI, RICHARD M (contact) SPRAGGINS, JEFFREY M | VANDERBILT UNIVERSITY | Vanderbilt University Biomolecular Multimodal Imaging Center for 3-Dimensional Tissue Mapping |
| SNYDER, MICHAEL P. (contact) NOLAN, GARRY P | STANFORD UNIVERSITY | Stanford Tissue Mapping Center |
| ZHANG, KUN (contact) HAGOOD, JAMES S. JAIN, SANJAY KHARCHENKO, PETER V SUN, XIN | UNIVERSITY OF CALIFORNIA, SAN DIEGO | KULMAP: Human Kidney, urinary tract and lung mapping center |
| PI Name | Institution Name | Title |
|---|---|---|
| BAR-JOSEPH, ZIV (contact) PATEN, BENEDICT TEICHMANN, SARAH | CARNEGIE-MELLON UNIVERSITY | COMPREHENSIVE, FLEXIBLE AND FAIR TOOLS FOR THE HUBMAP HIVE |
| BORNER, KATY | INDIANA UNIVERSITY BLOOMINGTON | The Human Body Atlas: High-Resolution, Functional Mapping of Voxel, Vector, and Meta Datasets |
| GEHLENBORG, NILS | HARVARD MEDICAL SCHOOL | HuBMAP HIVE Tools Component |
| BLOOD, PHILIP (contact) SILVERSTEIN, JONATHAN C. | CARNEGIE-MELLON UNIVERSITY | Flexible Hybrid Cloud Infrastructure for Seamless Management of HuBMAP Resources |
| SATIJA, RAHUL (contact) MARIONI, JOHN CARLO | NEW YORK GENOME CENTER | Comprehensive reference map construction, geolocation and data integration for HuBMAP HIVE |
