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The search results on this publication page are automated on a monthly schedule based on acknowledgement of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.
| Title | Authors | Journal | PubMedID | Publication Date |
|---|---|---|---|---|
| Rapid and precise genome engineering in a naturally short-lived vertebrate. | Bedbrook, Claire N; Nath, Ravi D; Nagvekar, Rahul; Deisseroth, Karl; Brunet, Anne | eLife | 37191291 | 2023 May 09 |
| Accelerated transcriptional elongation during aging impairs longevity. | Tyshkovskiy, Alexander; Zhang, Sirui; Gladyshev, Vadim N | Cell research | 37253838 | 2023 May 30 |
| Extraction and Purification of Single Nuclei from Frozen Human Brain Tissue. | Palmer, Carter R; Chun, Jerold | Methods in molecular biology (Clifton, N.J.) | 36399263 | 2023 |
| Hepatic stellate cells maintain liver homeostasis through paracrine neurotrophin-3 signaling that induces hepatocyte proliferation. | Trinh, Vincent Quoc-Huy; Lee, Ting-Fang; Lemoinne, Sara; Ray, Kevin C; Ybanez, Maria D; Tsuchida, Takuma; Carter, James K; Agudo, Judith; Brown, Brian D; Akat, Kemal M; Friedman, Scott L; Lee, Youngmin A | Science signaling | 37253090 | 2023 May 30 |
| Engineered Escherichia coli for the in situ secretion of therapeutic nanobodies in the gut. | Lynch, Jason P; González-Prieto, Coral; Reeves, Analise Z; Bae, Sena; Powale, Urmila; Godbole, Neha P; Tremblay, Jacqueline M; Schmidt, Florian I; Ploegh, Hidde L; Kansra, Vikram; Glickman, Jonathan N; Leong, John M; Shoemaker, Charles B; Garrett, Wendy S; Lesser, Cammie F | Cell host & microbe | 37003258 | 2023 Apr 12 |
| Rapid thalamocortical network switching mediated by cortical synchronization underlies propofol-induced EEG signatures: a biophysical model. | Soplata, Austin E; Adam, Elie; Brown, Emery N; Purdon, Patrick L; McCarthy, Michelle M; Kopell, Nancy | Journal of neurophysiology | 37314079 | 2023 Jul 01 |
| A modified Michaelis-Menten equation estimates growth from birth to 3 years in healthy babies in the US. | Walters, William; Ley, Catherine; Hastie, Trevor; Ley, Ruth; Parsonnet, Julie | Research square | 36711501 | 2023 Jun 22 |
| High central venous pressure amplitude predicts successful defibrillation in a porcine model of cardiac arrest. | Balzer, Claudius; Eagle, Susan S; Yannopoulos, Demetris; Aufderheide, Tom P; Riess, Matthias L | Resuscitation | 36736947 | 2023 Apr |
| Mechanisms That Underlie Expression of Estradiol-Induced Excitatory Synaptic Potentiation in the Hippocampus Differ between Males and Females. | Jain, Anant; Woolley, Catherine S | The Journal of neuroscience : the official journal of the Society for Neuroscience | 36650060 | 2023 Feb 22 |
| oFlowSeq: a quantitative approach to identify protein coding mutations affecting cell type enrichment using mosaic CRISPR-Cas9 edited cerebral organoids. | Dawes, Pepper; Murray, Liam F; Olson, Meagan N; Barton, Nathaniel J; Smullen, Molly; Suresh, Madhusoodhanan; Yan, Guang; Zhang, Yucheng; Fernandez-Fontaine, Aria; English, Jay; Uddin, Mohammed; Pak, ChangHui; Church, George M; Chan, Yingleong; Lim, Elaine T | Human genetics | 36877372 | 2023 Mar 06 |
| Nondestructive 3D Pathology with Light-Sheet Fluorescence Microscopy for Translational Research and Clinical Assays. | Liu, Jonathan T C; Glaser, Adam K; Poudel, Chetan; Vaughan, Joshua C | Annual review of analytical chemistry (Palo Alto, Calif.) | 36854208 | 2023 Jun 14 |
| Single-nucleus multiregion transcriptomic analysis of brain vasculature in Alzheimer's disease. | Sun, Na; Akay, Leyla Anne; Murdock, Mitchell H; Park, Yongjin; Galiana-Melendez, Fabiola; Bubnys, Adele; Galani, Kyriaki; Mathys, Hansruedi; Jiang, Xueqiao; Ng, Ayesha P; Bennett, David A; Tsai, Li-Huei; Kellis, Manolis | Nature neuroscience | 37264161 | 2023 Jun |
| Four anti-aging drugs and calorie-restricted diet produce parallel effects in fat, brain, muscle, macrophages, and plasma of young mice. | Li, Xinna; McPherson, Madaline; Hager, Mary; Lee, Michael; Chang, Peter; Miller, Richard A | GeroScience | 36920743 | 2023 Mar 15 |
| Conserved transcription factors promote cell fate stability and restrict reprogramming potential in differentiated cells. | Missinato, Maria A; Murphy, Sean; Lynott, Michaela; Yu, Michael S; Kervadec, Anaïs; Chang, Yu-Ling; Kannan, Suraj; Loreti, Mafalda; Lee, Christopher; Amatya, Prashila; Tanaka, Hiroshi; Huang, Chun-Teng; Puri, Pier Lorenzo; Kwon, Chulan; Adams, Peter D; Qian, Li; Sacco, Alessandra; Andersen, Peter; Colas, Alexandre R | Nature communications | 36973293 | 2023 Mar 27 |
| Babesia duncani multi-omics identifies virulence factors and drug targets. | Singh, Pallavi; Lonardi, Stefano; Liang, Qihua; Vydyam, Pratap; Khabirova, Eleonora; Fang, Tiffany; Gihaz, Shalev; Thekkiniath, Jose; Munshi, Muhammad; Abel, Steven; Ciampossin, Loic; Batugedara, Gayani; Gupta, Mohit; Lu, Xueqing Maggie; Lenz, Todd; Chakravarty, Sakshar; Cornillot, Emmanuel; Hu, Yangyang; Ma, Wenxiu; Gonzalez, Luis Miguel; Sánchez, Sergio; Estrada, Karel; Sánchez-Flores, Alejandro; Montero, Estrella; Harb, Omar S; Le Roch, Karine G; Mamoun, Choukri Ben | Nature microbiology | 37055610 | 2023 May |
| Stabilizing the return to normal behavior in an epidemic. | Berry, Tyrus; Ferrari, Matthew; Sauer, Timothy; Greybush, Steven J; Ebeigbe, Donald; Whalen, Andrew J; Schiff, Steven J | medRxiv : the preprint server for health sciences | 36993470 | 2023 May 22 |
| Targeting lipid-protein interaction to treat Syk-mediated acute myeloid leukemia. | Singaram, Indira; Sharma, Ashutosh; Pant, Shashank; Lihan, Muyun; Park, Mi-Jeong; Pergande, Melissa; Buwaneka, Pawanthi; Hu, Yusi; Mahmud, Nadim; Kim, You-Me; Cologna, Stephanie; Gevorgyan, Vladimir; Khan, Irum; Tajkhorshid, Emad; Cho, Wonhwa | Nature chemical biology | 36229686 | 2023 Feb |
| Cryo-EM structures of human ABCA7 provide insights into its phospholipid translocation mechanisms. | Le, Le Thi My; Thompson, James Robert; Dehghani-Ghahnaviyeh, Sepehr; Pant, Shashank; Dang, Phuoc Xuan; French, Jarrod Bradley; Kanikeyo, Takahisa; Tajkhorshid, Emad; Alam, Amer | The EMBO journal | 36484366 | 2023 Feb 01 |
| Receptor Elimination by E3 Ubiquitin Ligase Recruitment (REULR): A Targeted Protein Degradation Toolbox. | Siepe, Dirk H; Picton, Lora K; Garcia, K Christopher | ACS synthetic biology | 37011906 | 2023 Apr 21 |
| Deep ensemble learning enables highly accurate classification of stored red blood cell morphology. | Routt, Austin H; Yang, Natalia; Piety, Nathaniel Z; Lu, Madeleine; Shevkoplyas, Sergey S | Scientific reports | 36823298 | 2023 Feb 23 |
| Proximal tubule responses to injury: interrogation by single-cell transcriptomics. | Cippà, Pietro E; McMahon, Andrew P | Current opinion in nephrology and hypertension | 37074682 | 2023 Jul 01 |
| Weapons of stress reduction: (R,S)-ketamine and its metabolites as prophylactics for the prevention of stress-induced psychiatric disorders. | Chen, Briana K; Denny, Christine A | Neuropharmacology | 36427554 | 2023 Feb 15 |
| Epigenetic dosage identifies two major and functionally distinct β cell subtypes. | Dror, Erez; Fagnocchi, Luca; Wegert, Vanessa; Apostle, Stefanos; Grimaldi, Brooke; Gruber, Tim; Panzeri, Ilaria; Heyne, Steffen; Höffler, Kira Daniela; Kreiner, Victor; Ching, Reagan; Tsai-Hsiu Lu, Tess; Semwal, Ayush; Johnson, Ben; Senapati, Parijat; Lempradl, Adelheid; Schones, Dustin; Imhof, Axel; Shen, Hui; Pospisilik, John Andrew | Cell metabolism | 36948185 | 2023 May 02 |
| Disulfide bond in SUN2 regulates dynamic remodeling of LINC complexes at the nuclear envelope. | Sharma, Rahul; Hetzer, Martin W | Life science alliance | 37188462 | 2023 Aug |
| Hematopoietic Somatic Mosaicism Is Associated With an Increased Risk of Postoperative Atrial Fibrillation. | Ninni, Sandro; Dombrowicz, David; Kuznetsova, Tanya; Vicario, Rocio; Gao, Vance; Molendi-Coste, Olivier; Haas, Joel; Woitrain, Eloise; Coisne, Augustin; Neele, Annette E; Prange, Koen; Willemsen, Lisa; Aghezzaf, Samy; Fragkogianni, Stamatina; Tazibet, Amine; Pineau, Laurent; White, James Robert; Eeckhoute, Jérôme; Koussa, Mohamed; Dubrulle, Henri; Juthier, Francis; Soquet, Jérôme; Vincentelli, André; Edme, Jean-Louis; de Winther, Menno; Geissmann, Frederic; Staels, Bart; Montaigne, David | Journal of the American College of Cardiology | 36990546 | 2023 Apr 04 |
| Specialized Pro-Resolving Mediators as Resolution Pharmacology for the Control of Pain and Itch. | Ji, Ru-Rong | Annual review of pharmacology and toxicology | 36100219 | 2023 Jan 20 |
| How it feels in a cell. | Bonucci, Martina; Shu, Tong; Holt, Liam J | Trends in cell biology | 37286396 | 2023 Jun 05 |
| Occupational history associates with ALS survival and onset segment. | Goutman, Stephen A; Boss, Jonathan; Godwin, Christopher; Mukherjee, Bhramar; Feldman, Eva L; Batterman, Stuart A | Amyotrophic lateral sclerosis & frontotemporal degeneration | 36193557 | 2023 May |
| Autophagy at the synapse, an early site of dysfunction in neurodegeneration. | Jasutkar, Hilary Grosso; Yamamoto, Ai | Current opinion in physiology | 36968133 | 2023 Apr |
| miRNA analysis reveals novel dysregulated pathways in amyotrophic lateral sclerosis. | Hur, Junguk; Paez-Colasante, Ximena; Figueroa-Romero, Claudia; Lo, Ting-Wen; Barmada, Sami J; Paulsen, Michelle T; Ljungman, Mats; Alakwaa, Fadhl M; Savelieff, Masha G; Goutman, Stephen A; Feldman, Eva L | Human molecular genetics | 36219176 | 2023 Mar 06 |
| A rapid microglial metabolic response controls metabolism and improves memory. | Drougard, Anne; Ma, Eric H; Wegert, Vanessa; Sheldon, Ryan; Panzeri, Ilaria; Vatsa, Naman; Apostle, Stefanos; Fagnocchi, Luca; Schaf, Judith; Gossens, Klaus; Völker, Josephine; Pang, Shengru; Bremser, Anna; Dror, Erez; Giacona, Francesca; Sagar; Henderson, Michael X; Prinz, Marco; Jones, Russell G; Pospisilik, J Andrew | bioRxiv : the preprint server for biology | 37066282 | 2023 Apr 04 |
| High-Temporal-Resolution Lung Kinetic Modeling Using Total-Body Dynamic PET with Time-Delay and Dispersion Corrections. | Wang, Yiran; Spencer, Benjamin A; Schmall, Jeffrey; Li, Elizabeth; Badawi, Ramsey D; Jones, Terry; Cherry, Simon R; Wang, Guobao | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 37116916 | 2023 Jul |
| Innate immune pathway modulator screen identifies STING pathway activation as a strategy to inhibit multiple families of arbo and respiratory viruses. | Garcia Jr, Gustavo; Irudayam, Joseph Ignatius; Jeyachandran, Arjit Vijey; Dubey, Swati; Chang, Christina; Castillo Cario, Sebastian; Price, Nate; Arumugam, Sathya; Marquez, Angelica L; Shah, Aayushi; Fanaei, Amir; Chakravarty, Nikhil; Joshi, Shantanu; Sinha, Sanjeev; French, Samuel W; Parcells, Mark S; Ramaiah, Arunachalam; Arumugaswami, Vaithilingaraja | Cell reports. Medicine | 37119814 | 2023 May 16 |
| Exercise reprograms the inflammatory landscape of multiple stem cell compartments during mammalian aging. | Liu, Ling; Kim, Soochi; Buckley, Matthew T; Reyes, Jaime M; Kang, Jengmin; Tian, Lei; Wang, Mingqiang; Lieu, Alexander; Mao, Michelle; Rodriguez-Mateo, Cristina; Ishak, Heather D; Jeong, Mira; Wu, Joseph C; Goodell, Margaret A; Brunet, Anne; Rando, Thomas A | Cell stem cell | 37080206 | 2023 May 04 |
| Germline-encoded amino acid-binding motifs drive immunodominant public antibody responses. | Shrock, Ellen L; Timms, Richard T; Kula, Tomasz; Mena, Elijah L; West Jr, Anthony P; Guo, Rui; Lee, I-Hsiu; Cohen, Alexander A; McKay, Lindsay G A; Bi, Caihong; Leng, Yumei; Fujimura, Eric; Horns, Felix; Li, Mamie; Wesemann, Duane R; Griffiths, Anthony; Gewurz, Benjamin E; Bjorkman, Pamela J; Elledge, Stephen J | Science (New York, N.Y.) | 37023193 | 2023 Apr 07 |
| Identification of White Matter Hyperintensities in Routine Emergency Department Visits Using Portable Bedside Magnetic Resonance Imaging. | de Havenon, Adam; Parasuram, Nethra R; Crawford, Anna L; Mazurek, Mercy H; Chavva, Isha R; Yadlapalli, Vineetha; Iglesias, Juan E; Rosen, Matthew S; Falcone, Guido J; Payabvash, Seyedmehdi; Sze, Gordon; Sharma, Richa; Schiff, Steven J; Safdar, Basmah; Wira, Charles; Kimberly, William T; Sheth, Kevin N | Journal of the American Heart Association | 37218590 | 2023 Jun 06 |
| Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. | Kim, Tae-Wuk; Park, Chan Ho; Hsu, Chuan-Chih; Kim, Yeong-Woo; Ko, Yeong-Woo; Zhang, Zhenzhen; Zhu, Jia-Ying; Hsiao, Yu-Chun; Branon, Tess; Kaasik, Krista; Saldivar, Evan; Li, Kevin; Pasha, Asher; Provart, Nicholas J; Burlingame, Alma L; Xu, Shou-Ling; Ting, Alice Y; Wang, Zhi-Yong | The Plant cell | 36660928 | 2023 Mar 15 |
| Spatially resolved epigenomic profiling of single cells in complex tissues. | Lu, Tian; Ang, Cheen Euong; Zhuang, Xiaowei | Cell | 37172568 | 2023 May 11 |
| Error-Correction Method for High-Throughput Sizing of Nanoscale Vesicles with Single-Molecule Localization Microscopy. | Jung, Seung-Ryoung; Kim, James; Vojtech, Lucia; Vaughan, Joshua C; Chiu, Daniel T | The journal of physical chemistry. B | 36944080 | 2023 Mar 30 |
| The computational capabilities of many-to-many protein interaction networks. | Klumpe, Heidi E; Garcia-Ojalvo, Jordi; Elowitz, Michael B; Antebi, Yaron E | Cell systems | 37348461 | 2023 Jun 21 |
| Phase Separation in Biology and Disease; Current Perspectives and Open Questions. | Boeynaems, Steven; Chong, Shasha; Gsponer, Jörg; Holt, Liam; Milovanovic, Dragomir; Mitrea, Diana M; Mueller-Cajar, Oliver; Portz, Bede; Reilly, John F; Reinkemeier, Christopher D; Sabari, Benjamin R; Sanulli, Serena; Shorter, James; Sontag, Emily; Strader, Lucia; Stachowiak, Jeanne; Weber, Stephanie C; White, Michael; Zhang, Huaiying; Zweckstetter, Markus; Elbaum-Garfinkle, Shana; Kriwacki, Richard | Journal of molecular biology | 36690068 | 2023 Mar 01 |
| Acceptability and Feasibility of eSCCIP: Results From a Pilot Study of the Electronic Surviving Cancer Competently Intervention Program. | Canter, Kimberly S; Vega, Gabriela; Perez Ramirez, Alejandra; Munoz Osorio, Angel; Thomas, Courtney; Lewis, Amanda M; Arasteh, Kamyar; Kazak, Anne | Journal of pediatric psychology | 36303445 | 2023 Mar 20 |
| Differential dynamics and direct interaction of bound ligands with lipids in multidrug transporter ABCG2. | Rasouli, Ali; Yu, Qin; Dehghani-Ghahnaviyeh, Sepehr; Wen, Po-Chao; Kowal, Julia; Locher, Kaspar P; Tajkhorshid, Emad | Proceedings of the National Academy of Sciences of the United States of America | 36580587 | 2023 Jan 03 |
| Contextual modifiers of healthspan, lifespan, and epigenome in mice under chronic social stress. | Razzoli, Maria; Nyuyki-Dufe, Kewir; Chen, Brian H; Bartolomucci, Alessandro | Proceedings of the National Academy of Sciences of the United States of America | 37043532 | 2023 Apr 18 |
| Metabolism, homeostasis, and aging. | Moldakozhayev, Alibek; Gladyshev, Vadim N | Trends in endocrinology and metabolism: TEM | 36681595 | 2023 Mar |
| An Atlas of Variant Effects to understand the genome at nucleotide resolution. | Fowler, Douglas M; Adams, David J; Gloyn, Anna L; Hahn, William C; Marks, Debora S; Muffley, Lara A; Neal, James T; Roth, Frederick P; Rubin, Alan F; Starita, Lea M; Hurles, Matthew E | Genome biology | 37394429 | 2023 Jul 03 |
| Fast light-field 3D microscopy with out-of-distribution detection and adaptation through Conditional Normalizing Flows. | Vizcaíno, Josué Page; Symvoulidis, Panagiotis; Wang, Zeguan; Jelten, Jonas; Favaro, Paolo; Boyden, Edward S; Lasser, Tobias | ArXiv | 37396615 | 2023 Jun 14 |
| Route-dependent spatial engram tagging in mouse dentate gyrus. | Wilmerding, Lucius K; Kondratyev, Ivan; Ramirez, Steve; Hasselmo, Michael E | Neurobiology of learning and memory | 36822466 | 2023 Apr |
| Single-cell transcriptomics of a dynamic cell behavior in murine airways. | Kwok, Sheldon J J; Montoro, Daniel T; Haber, Adam L; Yun, Seok-Hyun; Vinarsky, Vladimir | eLife | 37083555 | 2023 Apr 21 |
| PNMA2 forms non-enveloped virus-like capsids that trigger paraneoplastic neurological syndrome. | Xu, Junjie; Erlendsson, Simon; Singh, Manvendra; Regier, Matthew; Ibiricu, Iosune; Day, Gregory S; Piquet, Amanda L; Clardy, Stacey L; Feschotte, Cedric; Briggs, John A G; Shepherd, Jason D | bioRxiv : the preprint server for biology | 36798413 | 2023 Feb 09 |
| SYF2 suppression mitigates neurodegeneration in models of diverse forms of ALS. | Linares, Gabriel R; Li, Yichen; Chang, Wen-Hsuan; Rubin-Sigler, Jasper; Mendonca, Stacee; Hong, Sarah; Eoh, Yunsun; Guo, Wenxuan; Huang, Yi-Hsuan; Chang, Jonathan; Tu, Sharon; Dorjsuren, Nomongo; Santana, Manuel; Hung, Shu-Ting; Yu, Johnny; Perez, Joscany; Chickering, Michael; Cheng, Tze-Yuan; Huang, Chi-Chou; Lee, Shih-Jong James; Deng, Hao-Jen; Bach, Kieu-Tram; Gray, Kamden; Subramanyam, Vishvak; Rosenfeld, Jeffrey; Alworth, Samuel V; Goodarzi, Hani; Ichida, Justin K | Cell stem cell | 36736291 | 2023 Feb 02 |
| Foreign RNA spike-ins enable accurate allele-specific expression analysis at scale. | Mendelevich, Asia; Gupta, Saumya; Pakharev, Aleksei; Teodosiadis, Athanasios; Mironov, Andrey A; Gimelbrant, Alexander A | Bioinformatics (Oxford, England) | 37387154 | 2023 Jun 30 |
| Tuning phenylalanine fluorination to assess aromatic contributions to protein function and stability in cells. | Galles, Grace D; Infield, Daniel T; Clark, Colin J; Hemshorn, Marcus L; Manikandan, Shivani; Fazan, Frederico; Rasouli, Ali; Tajkhorshid, Emad; Galpin, Jason D; Cooley, Richard B; Mehl, Ryan A; Ahern, Christopher A | Nature communications | 36599844 | 2023 Jan 04 |
| Under the magnifying glass: The ups and downs of rDNA copy number. | Kindelay, Selina M; Maggert, Keith A | Seminars in cell & developmental biology | 35595601 | 2023 Feb 28 |
| Increased mesoscale diffusivity in response to acute glucose starvation. | Xie, Ying; Gresham, David; Holt, Liam J | microPublication biology | 36908311 | 2023 |
| Body mass index associates with amyotrophic lateral sclerosis survival and metabolomic profiles. | Goutman, Stephen A; Boss, Jonathan; Iyer, Gayatri; Habra, Hani; Savelieff, Masha G; Karnovsky, Alla; Mukherjee, Bhramar; Feldman, Eva L | Muscle & nerve | 36321729 | 2023 Mar |
| Label-free intraoperative histology of bone tissue via deep-learning-assisted ultraviolet photoacoustic microscopy. | Cao, Rui; Nelson, Scott D; Davis, Samuel; Liang, Yu; Luo, Yilin; Zhang, Yide; Crawford, Brooke; Wang, Lihong V | Nature biomedical engineering | 36123403 | 2023 Feb |
| Single-shot photoacoustic imaging with single-element transducer through a spatiotemporal encoder. | Zhao, Yanyu; Wang, Lihong V | Journal of biomedical optics | 37065647 | 2023 Apr |
| Exploring Vessel Wall Biology In Vivo by Ultrasensitive Total-Body PET. | Derlin, Thorsten; Spencer, Benjamin A; Mamach, Martin; Abdelhafez, Yasser; Nardo, Lorenzo; Badawi, Ramsey D; Cherry, Simon R; Bengel, Frank M | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 36175139 | 2023 Mar |
| Total-Body Multiparametric PET Quantification of 18 F-FDG Delivery and Metabolism in the Study of COVID-19 Recovery. | Wang, Yiran; Nardo, Lorenzo; Spencer, Benjamin A; Abdelhafez, Yasser G; Li, Elizabeth J; Omidvari, Negar; Chaudhari, Abhijit J; Badawi, Ramsey D; Jones, Terry; Cherry, Simon R; Wang, Guobao | medRxiv : the preprint server for health sciences | 37034643 | 2023 Mar 30 |
| Longitudinal Evaluation of Antibody Persistence in Mother-Infant Dyads After Severe Acute Respiratory Syndrome Coronavirus 2 Infection in Pregnancy. | Cambou, Mary C; Liu, Christine M; Mok, Thalia; Fajardo-Martinez, Viviana; Paiola, Sophia G; Ibarrondo, Francisco J; Kerin, Tara; Fuller, Trevon; Tobin, Nicole H; Garcia, Gustavo; Bhattacharya, Debika; Aldrovandi, Grace M; Arumugaswami, Vaithilingaraja; Foo, Suan-Sin; Jung, Jae U; Vasconcelos, Zilton; Brasil, Patricia; Brendolin, Michelle; Yang, Otto O; Rao, Rashmi; Nielsen-Saines, Karin | The Journal of infectious diseases | 36082433 | 2023 Jan 11 |
| Broad-spectrum antiviral inhibitors targeting pandemic potential RNA viruses. | Garcia Jr, Gustavo; Irudayam, Joseph Ignatius; Jeyachandran, Arjit Vijay; Dubey, Swati; Chang, Christina; Cario, Sebastian Castillo; Price, Nate; Arumugam, Sathya; Marquez, Angelica L; Shah, Aayushi; Fanaei, Amir; Chakravarty, Nikhil; Joshi, Shantanu; Sinha, Sanjeev; French, Samuel W; Parcells, Mark; Ramaiah, Arunachalam; Arumugaswami, Vaithilingaraja | bioRxiv : the preprint server for biology | 36711787 | 2023 Jan 20 |
| Foreign RNA spike-ins enable accurate allele-specific expression analysis at scale. | Mendelevich, Asia; Gupta, Saumya; Pakharev, Aleksei; Teodosiadis, Athanasios; Mironov, Andrey A; Gimelbrant, Alexander A | bioRxiv : the preprint server for biology | 36798258 | 2023 Feb 12 |
| Selective Serotonin Reuptake Inhibitors within Cells: Temporal Resolution in Cytoplasm, Endoplasmic Reticulum, and Membrane. | Nichols, Aaron L; Blumenfeld, Zack; Luebbert, Laura; Knox, Hailey J; Muthusamy, Anand K; Marvin, Jonathan S; Kim, Charlene H; Grant, Stephen N; Walton, David P; Cohen, Bruce N; Hammar, Rebekkah; Looger, Loren; Artursson, Per; Dougherty, Dennis A; Lester, Henry A | The Journal of neuroscience : the official journal of the Society for Neuroscience | 36868853 | 2023 Mar 29 |
| Lineage motifs: developmental modules for control of cell type proportions. | Tran, Martin; Askary, Amjad; Elowitz, Michael B | bioRxiv : the preprint server for biology | 37333085 | 2023 Jun 07 |
| Venous waveform analysis detects acute right ventricular failure in a rat respiratory arrest model. | Lefevre, Ryan J; Barajas, Matthew B; Balzer, Claudius; Baudenbacher, Franz J; Riess, Matthias L; Staudt, Genevieve; Hernandez, Antonio; Eagle, Susan S | Pediatric research | 36042330 | 2023 May |
| Condensation of LINE-1 is critical for retrotransposition. | Sil, Srinjoy; Keegan, Sarah; Ettefa, Farida; Denes, Lance T; Boeke, Jef D; Holt, Liam J | eLife | 37114770 | 2023 Apr 28 |
| The environmental stress response regulates ribosome content in cell cycle-arrested S. cerevisiae. | Terhorst, Allegra; Sandikci, Arzu; Whittaker, Charles A; Szórádi, Tamás; Holt, Liam J; Neurohr, Gabriel E; Amon, Angelika | Frontiers in cell and developmental biology | 37123399 | 2023 |
| Epithelial tissue confinement inhibits cell growth and leads to volume-reducing divisions. | Devany, John; Falk, Martin J; Holt, Liam J; Murugan, Arvind; Gardel, Margaret L | Developmental cell | 37339629 | 2023 Jun 14 |
| Disrupting pathologic phase transitions in neurodegeneration. | Hurtle, Bryan T; Xie, Longxin; Donnelly, Christopher J | The Journal of clinical investigation | 37395272 | 2023 Jul 03 |
| PIKFYVE inhibition mitigates disease in models of diverse forms of ALS. | Hung, Shu-Ting; Linares, Gabriel R; Chang, Wen-Hsuan; Eoh, Yunsun; Krishnan, Gopinath; Mendonca, Stacee; Hong, Sarah; Shi, Yingxiao; Santana, Manuel; Kueth, Chuol; Macklin-Isquierdo, Samantha; Perry, Sarah; Duhaime, Sarah; Maios, Claudia; Chang, Jonathan; Perez, Joscany; Couto, Alexander; Lai, Jesse; Li, Yichen; Alworth, Samuel V; Hendricks, Eric; Wang, Yaoming; Zlokovic, Berislav V; Dickman, Dion K; Parker, J Alex; Zarnescu, Daniela C; Gao, Fen-Biao; Ichida, Justin K | Cell | 36754049 | 2023 Feb 16 |
| Ancestral protein reconstruction reveals evolutionary events governing variation in Dicer helicase function. | Aderounmu, Adedeji M; Aruscavage, P Joseph; Kolaczkowski, Bryan; Bass, Brenda L | eLife | 37068011 | 2023 Apr 17 |
| Discovery of VH domains that allosterically inhibit ENPP1. | Solomon, Paige E; Bracken, Colton J; Carozza, Jacqueline A; Wang, Haoqing; Young, Elizabeth P; Wellner, Alon; Liu, Chang C; Sweet-Cordero, E Alejandro; Li, Lingyin; Wells, James A | Nature chemical biology | 37400538 | 2023 Jul 03 |
| Recording of cellular physiological histories along optically readable self-assembling protein chains. | Linghu, Changyang; An, Bobae; Shpokayte, Monika; Celiker, Orhan T; Shmoel, Nava; Zhang, Ruihan; Zhang, Chi; Park, Demian; Park, Won Min; Ramirez, Steve; Boyden, Edward S | Nature biotechnology | 36593405 | 2023 May |
| SPIDR: a highly multiplexed method for mapping RNA-protein interactions uncovers a potential mechanism for selective translational suppression upon cellular stress. | Wolin, Erica; Guo, Jimmy K; Blanco, Mario R; Perez, Andrew A; Goronzy, Isabel N; Abdou, Ahmed A; Gorhe, Darvesh; Guttman, Mitchell; Jovanovic, Marko | bioRxiv : the preprint server for biology | 37333139 | 2023 Jun 07 |
| Helicobacter pylori Chronic Infection Selects for Effective Colonizers of Metaplastic Glands. | O'Brien, V P; Jackson, L K; Frick, J P; Rodriguez Martinez, A E; Jones, D S; Johnston, C D; Salama, N R | mBio | 36598261 | 2023 Feb 28 |
| Partial convergence of the human vaginal and rectal maternal microbiota in late gestation and early post-partum. | Shin, Hakdong; Martinez 2nd, Keith A; Henderson, Nora; Jay, Melanie; Schweizer, William; Bogaert, Debby; Park, Gwoncheol; Bokulich, Nicholas A; Blaser, Martin J; Dominguez-Bello, Maria Gloria | NPJ biofilms and microbiomes | 37311781 | 2023 Jun 13 |
| Negative Data, Oh No What Should I Do? How Publication of Negative Data Removes Roadblocks to Productive Research from the Perspective of Scientists Who Perform the Experiments. | Beltrame, Angela K; Caldon, Johnathon J; Gurski, Cody J; Hajiyeva, Zivar; Meinhardt, Nathan J; Sommers, Kelli C; Neu, Savannah D; Dittel, Bonnie N | ImmunoHorizons | 37252801 | 2023 May 01 |
| CeLab, a microfluidic platform for the study of life history traits, reveals metformin and SGK-1 regulation of longevity and reproductive span. | Sohrabi, Salman; Cota, Vanessa; Murphy, Coleen T | Lab on a chip | 37221962 | 2023 Jun 13 |
| The effect of a pharmaceutical ghrelin agonist on lifespan in C57BL/6J male mice: A controlled experiment. | Kaiser, Kathryn A; Kadish, Inga; van Groen, Thomas; Smith Jr, Daniel L; Dickinson, Stephanie; Henschel, Beate; Parker, Erik S; Brown, Andrew W; Allison, David B | Aging cell | 36734122 | 2023 Apr |
| Central memory T cells are the most effective precursors of resident memory T cells in human skin. | Matos, Tiago R; Gehad, Ahmed; Teague, Jessica E; Dyring-Andersen, Beatrice; Benezeder, Theresa; Dowlatshahi, Mitra; Crouch, Jack; Watanabe, Yoshinori; O'Malley, John T; Kupper, Thomas S; Yang, Chao; Watanabe, Rei; Clark, Rachael A | Science immunology | 35452256 | 2022 Apr 22 |
| Omicron's message on vaccines: Boosting begets breadth. | Wesemann, Duane R | Cell | 35065712 | 2022 Feb 03 |
| Differential richness inference for 16S rRNA marker gene surveys. | Kumar, M Senthil; Slud, Eric V; Hehnly, Christine; Zhang, Lijun; Broach, James; Irizarry, Rafael A; Schiff, Steven J; Paulson, Joseph N | Genome biology | 35915508 | 2022 Aug 01 |
| Myeloperoxidase as a Marker to Differentiate Mouse Monocyte/Macrophage Subsets. | Gurski, Cody J; Dittel, Bonnie N | International journal of molecular sciences | 35897821 | 2022 Jul 26 |
| An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning. | McKay, Andrew; Costa, Emma K; Chen, Jingxun; Hu, Chi-Kuo; Chen, Xiaoshan; Bedbrook, Claire N; Khondker, Rishad C; Thielvoldt, Mike; Priya Singh, Param; Wyss-Coray, Tony; Brunet, Anne | eLife | 36354233 | 2022 Nov 10 |
| Rapid directed molecular evolution of fluorescent proteins in mammalian cells. | Babakhanova, Siranush; Jung, Erica E; Namikawa, Kazuhiko; Zhang, Hanbin; Wang, Yangdong; Subach, Oksana M; Korzhenevskiy, Dmitry A; Rakitina, Tatiana V; Xiao, Xian; Wang, Wenjing; Shi, Jing; Drobizhev, Mikhail; Park, Demian; Eisenhard, Lea; Tang, Hongyun; Köster, Reinhard W; Subach, Fedor V; Boyden, Edward S; Piatkevich, Kiryl D | Protein science : a publication of the Protein Society | 34913537 | 2022 Mar |
| Xist spatially amplifies SHARP/SPEN recruitment to balance chromosome-wide silencing and specificity to the X chromosome. | Jachowicz, Joanna W; Strehle, Mackenzie; Banerjee, Abhik K; Blanco, Mario R; Thai, Jasmine; Guttman, Mitchell | Nature structural & molecular biology | 35301492 | 2022 Mar |
| High-throughput sequencing of single neuron projections reveals spatial organization in the olfactory cortex. | Chen, Yushu; Chen, Xiaoyin; Baserdem, Batuhan; Zhan, Huiqing; Li, Yan; Davis, Martin B; Kebschull, Justus M; Zador, Anthony M; Koulakov, Alexei A; Albeanu, Dinu F | Cell | 36306734 | 2022 Oct 27 |
| Emerging strategies for engineering Escherichia coli Nissle 1917-based therapeutics. | Lynch, Jason P; Goers, Lisa; Lesser, Cammie F | Trends in pharmacological sciences | 35232591 | 2022 Sep |
| Single domain antibodies against enteric pathogen virulence factors are active as curli fiber fusions on probiotic E. coli Nissle 1917. | Gelfat, Ilia; Aqeel, Yousuf; Tremblay, Jacqueline M; Jaskiewicz, Justyna J; Shrestha, Anishma; Lee, James N; Hu, Shenglan; Qian, Xi; Magoun, Loranne; Sheoran, Abhineet; Bedenice, Daniela; Giem, Colter; Manjula-Basavanna, Avinash; Pulsifer, Amanda R; Tu, Hann X; Li, Xiaoli; Minus, Marilyn L; Osburne, Marcia S; Tzipori, Saul; Shoemaker, Charles B; Leong, John M; Joshi, Neel S | PLoS pathogens | 36107831 | 2022 Sep |
| A conserved Bacteroidetes antigen induces anti-inflammatory intestinal T lymphocytes. | Bousbaine, Djenet; Fisch, Laura I; London, Mariya; Bhagchandani, Preksha; Rezende de Castro, Tiago B; Mimee, Mark; Olesen, Scott; Reis, Bernardo S; VanInsberghe, David; Bortolatto, Juliana; Poyet, Mathilde; Cheloha, Ross W; Sidney, John; Ling, Jingjing; Gupta, Aaron; Lu, Timothy K; Sette, Alessandro; Alm, Eric J; Moon, James J; Victora, Gabriel D; Mucida, Daniel; Ploegh, Hidde L; Bilate, Angelina M | Science (New York, N.Y.) | 35926021 | 2022 Aug 05 |
| Repairing the blood-brain barrier. | McMahon, Andrew P; Ichida, Justin K | Science (New York, N.Y.) | 35175806 | 2022 Feb 18 |
| Transcription factor Acj6 controls dendrite targeting via a combinatorial cell-surface code. | Xie, Qijing; Li, Jiefu; Li, Hongjie; Udeshi, Namrata D; Svinkina, Tanya; Orlin, Daniel; Kohani, Sayeh; Guajardo, Ricardo; Mani, D R; Xu, Chuanyun; Li, Tongchao; Han, Shuo; Wei, Wei; Shuster, S Andrew; Luginbuhl, David J; Quake, Stephen R; Murthy, Swetha E; Ting, Alice Y; Carr, Steven A; Luo, Liqun | Neuron | 35613619 | 2022 Jul 20 |
| A genetic model for in vivo proximity labelling of the mammalian secretome. | Yang, Rui; Meyer, Amanda S; Droujinine, Ilia A; Udeshi, Namrata D; Hu, Yanhui; Guo, Jinjin; McMahon, Jill A; Carey, Dominique K; Xu, Charles; Fang, Qiao; Sha, Jihui; Qin, Shishang; Rocco, David; Wohlschlegel, James; Ting, Alice Y; Carr, Steven A; Perrimon, Norbert; McMahon, Andrew P | Open biology | 35946312 | 2022 Aug |
| Identifying Common Molecular Mechanisms in Experimental and Human Acute Kidney Injury. | Gerhardt, Louisa M S; McMahon, Andrew P | Seminars in nephrology | 36402654 | 2022 May |
| Cardiomyocytes disrupt pyrimidine biosynthesis in nonmyocytes to regulate heart repair. | Li, Shen; Yokota, Tomohiro; Wang, Ping; Ten Hoeve, Johanna; Ma, Feiyang; Le, Thuc M; Abt, Evan R; Zhou, Yonggang; Wu, Rimao; Nanthavongdouangsy, Maxine; Rodriguez, Abraham; Wang, Yijie; Lin, Yen-Ju; Muranaka, Hayato; Sharpley, Mark; Braddock, Demetrios T; MacRae, Vicky E; Banerjee, Utpal; Chiou, Pei-Yu; Seldin, Marcus; Huang, Dian; Teitell, Michael; Gertsman, Ilya; Jung, Michael; Bensinger, Steven J; Damoiseaux, Robert; Faull, Kym; Pellegrini, Matteo; Lusis, Aldons J; Graeber, Thomas G; Radu, Caius G; Deb, Arjun | The Journal of clinical investigation | 34813507 | 2022 Jan 18 |
| Hippo Signaling Pathway Activation during SARS-CoV-2 Infection Contributes to Host Antiviral Response. | Garcia Jr, Gustavo; Wang, Yijie; Ignatius Irudayam, Joseph; Jeyachandran, Arjit Vijey; Cario, Sebastian Castillo; Sen, Chandani; Li, Shen; Li, Yunfeng; Kumar, Ashok; Nielsen-Saines, Karin; French, Samuel W; Shah, Priya S; Morizono, Kouki; Gomperts, Brigitte; Deb, Arjun; Ramaiah, Arunachalam; Arumugaswami, Vaithilingaraja | bioRxiv : the preprint server for biology | 35441167 | 2022 Apr 08 |
| High-dose rifampin improves bactericidal activity without increased intracerebral inflammation in animal models of tuberculous meningitis. | Ruiz-Bedoya, Camilo A; Mota, Filipa; Tucker, Elizabeth W; Mahmud, Farina J; Reyes-Mantilla, Maria I; Erice, Clara; Bahr, Melissa; Flavahan, Kelly; de Jesus, Patricia; Kim, John; Foss, Catherine A; Peloquin, Charles A; Hammoud, Dima A; Ordonez, Alvaro A; Pardo, Carlos A; Jain, Sanjay K | The Journal of clinical investigation | 35085105 | 2022 Mar 15 |
| Membrane Mixer: A Toolkit for Efficient Shuffling of Lipids in Heterogeneous Biological Membranes. | Licari, Giuseppe; Dehghani-Ghahnaviyeh, Sepehr; Tajkhorshid, Emad | Journal of chemical information and modeling | 35104125 | 2022 Feb 28 |
| Identification of structural transitions in bacterial fatty acid binding proteins that permit ligand entry and exit at membranes. | Gullett, Jessica M; Cuypers, Maxime G; Grace, Christy R; Pant, Shashank; Subramanian, Chitra; Tajkhorshid, Emad; Rock, Charles O; White, Stephen W | The Journal of biological chemistry | 35122790 | 2022 Mar |
| Electrophysiological signatures of inhibitory control in children with Tourette syndrome and attention-deficit/hyperactivity disorder. | Morand-Beaulieu, Simon; Smith, Stephanie D; Ibrahim, Karim; Wu, Jia; Leckman, James F; Crowley, Michael J; Sukhodolsky, Denis G | Cortex; a journal devoted to the study of the nervous system and behavior | 35042055 | 2022 Feb |
| Neuroligin-3 confines AMPA receptors into nanoclusters, thereby controlling synaptic strength at the calyx of Held synapses. | Han, Ying; Cao, Ran; Qin, Liming; Chen, Lulu Y; Tang, Ai-Hui; Südhof, Thomas C; Zhang, Bo | Science advances | 35704570 | 2022 Jun 17 |
| Analyses of the autism-associated neuroligin-3 R451C mutation in human neurons reveal a gain-of-function synaptic mechanism. | Wang, Le; Mirabella, Vincent R; Dai, Rujia; Su, Xiao; Xu, Ranjie; Jadali, Azadeh; Bernabucci, Matteo; Singh, Ishnoor; Chen, Yu; Tian, Jianghua; Jiang, Peng; Kwan, Kevin Y; Pak, ChangHui; Liu, Chunyu; Comoletti, Davide; Hart, Ronald P; Chen, Chao; Südhof, Thomas C; Pang, Zhiping P | Molecular psychiatry | 36280753 | 2022 Oct 24 |
| Controlling the crowd with a WNK. | Holt, Liam Joseph; Denes, Lance T | Cell | 36423576 | 2022 Nov 23 |
| Macromolecular crowding limits growth under pressure. | Alric, Baptiste; Formosa-Dague, Cécile; Dague, Etienne; Holt, Liam J; Delarue, Morgan | Nature physics | 37152719 | 2022 Apr |
| Stem cell therapy for central nervous system disorders: Metabolic interactions between transplanted cells and local microenvironments. | Sakowski, Stacey A; Chen, Kevin S | Neurobiology of disease | 35988874 | 2022 Oct 15 |
| Systems Biology Analysis of Temporal Dynamics That Govern Endothelial Response to Cyclic Stretch. | Lai, Michael W; Chow, Nathan; Checco, Antonio; Kunar, Balvir; Redmond, David; Rafii, Shahin; Rabbany, Sina Y | Biomolecules | 36551265 | 2022 Dec 08 |
| ExCel: Super-Resolution Imaging of C. elegans with Expansion Microscopy. | Yu, Chih-Chieh Jay; Orozco Cosio, Danielle M; Boyden, Edward S | Methods in molecular biology (Clifton, N.J.) | 35320565 | 2022 |
| Sharing Begins at Home: How Continuous and Ubiquitous FAIRness Can Enhance Research Productivity and Data Reuse. | Dempsey, William; Foster, Ian; Fraser, Scott; Kesselman, Carl | Harvard data science review | 36035065 | 2022 |
| Structure and engineering of the minimal type VI CRISPR-Cas13bt3. | Nakagawa, Ryoya; Kannan, Soumya; Altae-Tran, Han; Takeda, Satoru N; Tomita, Atsuhiro; Hirano, Hisato; Kusakizako, Tsukasa; Nishizawa, Tomohiro; Yamashita, Keitaro; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu | Molecular cell | 36027912 | 2022 Sep 01 |
| Telemedicine and visit completion among people with HIV during the coronavirus disease 2019 pandemic compared with prepandemic. | El-Nahal, Walid G; Shen, Nicola M; Keruly, Jeanne C; Jones, Joyce L; Fojo, Anthony T; Lau, Bryan; Manabe, Yukari C; Moore, Richard D; Gebo, Kelly A; Lesko, Catherine R; Chander, Geetanjali | AIDS (London, England) | 34711737 | 2022 Mar 01 |
| Spatially resolved epigenomic profiling of single cells in complex tissues. | Lu, Tian; Ang, Cheen Euong; Zhuang, Xiaowei | Cell | 36272405 | 2022 Nov 10 |
| The adaptive aging brain. | Aron, Liviu; Zullo, Joseph; Yankner, Bruce A | Current opinion in neurobiology | 34689041 | 2022 02 |
| Orgo-Seq integrates single-cell and bulk transcriptomic data to identify cell type specific-driver genes associated with autism spectrum disorder. | Lim, Elaine T; Chan, Yingleong; Dawes, Pepper; Guo, Xiaoge; Erdin, Serkan; Tai, Derek J C; Liu, Songlei; Reichert, Julia M; Burns, Mannix J; Chan, Ying Kai; Chiang, Jessica J; Meyer, Katharina; Zhang, Xiaochang; Walsh, Christopher A; Yankner, Bruce A; Raychaudhuri, Soumya; Hirschhorn, Joel N; Gusella, James F; Talkowski, Michael E; Church, George M | Nature communications | 35688811 | 2022 Jun 10 |
| Fluorescent labeling of abundant reactive entities (FLARE) for cleared-tissue and super-resolution microscopy. | Lee, Min Yen; Mao, Chenyi; Glaser, Adam K; Woodworth, Marcus A; Halpern, Aaron R; Ali, Adilijiang; Liu, Jonathan T C; Vaughan, Joshua C | Nature protocols | 35110740 | 2022 Mar |
| Embryo model completes gastrulation to neurulation and organogenesis. | Amadei, Gianluca; Handford, Charlotte E; Qiu, Chengxiang; De Jonghe, Joachim; Greenfeld, Hannah; Tran, Martin; Martin, Beth K; Chen, Dong-Yuan; Aguilera-Castrejon, Alejandro; Hanna, Jacob H; Elowitz, Michael B; Hollfelder, Florian; Shendure, Jay; Glover, David M; Zernicka-Goetz, Magdalena | Nature | 36007540 | 2022 Oct |
| Transcription-wide mapping of dihydrouridine reveals that mRNA dihydrouridylation is required for meiotic chromosome segregation. | Finet, Olivier; Yague-Sanz, Carlo; Krüger, Lara Katharina; Tran, Phong; Migeot, Valérie; Louski, Max; Nevers, Alicia; Rougemaille, Mathieu; Sun, Jingjing; Ernst, Felix G M; Wacheul, Ludivine; Wery, Maxime; Morillon, Antonin; Dedon, Peter; Lafontaine, Denis L J; Hermand, Damien | Molecular cell | 34798057 | 2022 Jan 20 |
| A Bcl6 Intronic Element Regulates T Follicular Helper Cell Differentiation. | Lai, Chen-Yen; Marcel, Nimi; Yaldiko, Allen W; Delpoux, Arnaud; Hedrick, Stephen M | Journal of immunology (Baltimore, Md. : 1950) | 35948398 | 2022 Sep 15 |
| Circadian disruption of hippocampus in an early senescence male mouse model. | Davis, Jennifer A; Paul, Jodi R; Mokashi, Mugdha V; Yates, Stefani A; Mount, Daniel J; Munir, Hira A; Goode, Lacy K; Young, Martin E; Allison, David B; Gamble, Karen L | Pharmacology, biochemistry, and behavior | 35447158 | 2022 Jun |
| Lutetium background radiation in total-body PET-A simulation study on opportunities and challenges in PET attenuation correction. | Omidvari, Negar; Cheng, Li; Leung, Edwin K; Abdelhafez, Yasser G; Badawi, Ramsey D; Ma, Tianyu; Qi, Jinyi; Cherry, Simon R | Frontiers in nuclear medicine (Lausanne, Switzerland) | 36172601 | 2022 |
| RNA sequencing-based screen for reactivation of silenced alleles of autosomal genes. | Gupta, Saumya; Lafontaine, Denis L; Vigneau, Sebastien; Mendelevich, Asia; Vinogradova, Svetlana; Igarashi, Kyomi J; Bortvin, Andrew; Alves-Pereira, Clara F; Nag, Anwesha; Gimelbrant, Alexander A | G3 (Bethesda, Md.) | 35100361 | 2022 Feb 04 |
| Ataxia-linked SLC1A3 mutations alter EAAT1 chloride channel activity and glial regulation of CNS function. | Wu, Qianyi; Akhter, Azman; Pant, Shashank; Cho, Eunjoo; Zhu, Jin Xin; Garner, Alastair; Ohyama, Tomoko; Tajkhorshid, Emad; van Meyel, Donald J; Ryan, Renae M | The Journal of clinical investigation | 35167492 | 2022 Apr 01 |
| Posttranslational modifications optimize the ability of SARS-CoV-2 spike for effective interaction with host cell receptors. | Kapoor, Karan; Chen, Tianle; Tajkhorshid, Emad | Proceedings of the National Academy of Sciences of the United States of America | 35737823 | 2022 07 12 |
| Molecular View into Preferential Binding of the Factor VII Gla Domain to Phosphatidic Acid. | Muller, Melanie P; Morrissey, James H; Tajkhorshid, Emad | Biochemistry | 35853076 | 2022 Aug 16 |
| Live analysis of position-effect variegation in Drosophila reveals different modes of action for HP1a and Su(var)3-9. | Bughio, Farah J; Maggert, Keith A | Proceedings of the National Academy of Sciences of the United States of America | 35704756 | 2022 Jun 21 |
| FZD2 Regulates Murine Hair Follicle Function and Maintenance. | Brennan-Crispi, Donna M; Frankfurter, Maxwell; Murphy, Christina; Sheng, Emily; Xu, Mingang; Morrisey, Edward E; Millar, Sarah E; Leung, Thomas H | The Journal of investigative dermatology | 35051380 | 2022 Aug |
| Systematically quantifying morphological features reveals constraints on organoid phenotypes. | Beck, Lauren E; Lee, Jasmine; Coté, Christopher; Dunagin, Margaret C; Lukonin, Ilya; Salla, Nikkita; Chang, Marcello K; Hughes, Alex J; Mornin, Joseph D; Gartner, Zev J; Liberali, Prisca; Raj, Arjun | Cell systems | 35705097 | 2022 Jul 20 |
| Allelic correlation is a marker of trade-offs between barriers to transmission of expression variability and signal responsiveness in genetic networks. | Boe, Ryan H; Ayyappan, Vinay; Schuh, Lea; Raj, Arjun | Cell systems | 36450286 | 2022 Dec 21 |
| Nanoarchitecture and molecular interactions of epithelial cell junction proteins revealed by super-resolution microscopy. | Naser, Amna N; Guiler, William; Lu, Qun; Chen, Yan-Hua | Annals of the New York Academy of Sciences | 35819053 | 2022 Oct |
| Targeting BCL-XL in fibrolamellar hepatocellular carcinoma. | Shebl, Bassem; Ng, Denise; Lalazar, Gadi; Rosemore, Carly; Finkelstein, Tova M; Migler, Rachael D; Zheng, Guangrong; Zhang, Peiyi; Jiang, Caroline S; Qureshi, Adam; Vaughan, Roger; Yarchoan, Mark; de Jong, Ype P; Rice, Charles M; Coffino, Philip; Ortiz, Michael V; Zhou, Daohong; Simon, Sanford M | JCI insight | 36073545 | 2022 Sep 08 |
| Human hepatocyte PNPLA3-148M exacerbates rapid non-alcoholic fatty liver disease development in chimeric mice. | Kabbani, Mohammad; Michailidis, Eleftherios; Steensels, Sandra; Fulmer, Clifton G; Luna, Joseph M; Le Pen, Jérémie; Tardelli, Matteo; Razooky, Brandon; Ricardo-Lax, Inna; Zou, Chenhui; Zeck, Briana; Stenzel, Ansgar F; Quirk, Corrine; Foquet, Lander; Ashbrook, Alison W; Schneider, William M; Belkaya, Serkan; Lalazar, Gadi; Liang, Yupu; Pittman, Meredith; Devisscher, Lindsey; Suemizu, Hiroshi; Theise, Neil D; Chiriboga, Luis; Cohen, David E; Copenhaver, Robert; Grompe, Markus; Meuleman, Philip; Ersoy, Baran A; Rice, Charles M; de Jong, Ype P | Cell reports | 36103835 | 2022 Sep 13 |
| Emerging technologies and their impact on regulatory science. | Anklam, Elke; Bahl, Martin Iain; Ball, Robert; Beger, Richard D; Cohen, Jonathan; Fitzpatrick, Suzanne; Girard, Philippe; Halamoda-Kenzaoui, Blanka; Hinton, Denise; Hirose, Akihiko; Hoeveler, Arnd; Honma, Masamitsu; Hugas, Marta; Ishida, Seichi; Kass, George En; Kojima, Hajime; Krefting, Ira; Liachenko, Serguei; Liu, Yan; Masters, Shane; Marx, Uwe; McCarthy, Timothy; Mercer, Tim; Patri, Anil; Pelaez, Carmen; Pirmohamed, Munir; Platz, Stefan; Ribeiro, Alexandre Js; Rodricks, Joseph V; Rusyn, Ivan; Salek, Reza M; Schoonjans, Reinhilde; Silva, Primal; Svendsen, Clive N; Sumner, Susan; Sung, Kyung; Tagle, Danilo; Tong, Li; Tong, Weida; Eijnden-van-Raaij, Janny van den; Vary, Neil; Wang, Tao; Waterton, John; Wang, May; Wen, Hairuo; Wishart, David; Yuan, Yinyin; Slikker Jr, William | Experimental biology and medicine (Maywood, N.J.) | 34783606 | 2022 01 |
| Tissue-resident memory and circulating T cells are early responders to pre-surgical cancer immunotherapy. | Luoma, Adrienne M; Suo, Shengbao; Wang, Yifan; Gunasti, Lauren; Porter, Caroline B M; Nabilsi, Nancy; Tadros, Jenny; Ferretti, Andrew P; Liao, Sida; Gurer, Cagan; Chen, Yu-Hui; Criscitiello, Shana; Ricker, Cora A; Dionne, Danielle; Rozenblatt-Rosen, Orit; Uppaluri, Ravindra; Haddad, Robert I; Ashenberg, Orr; Regev, Aviv; Van Allen, Eliezer M; MacBeath, Gavin; Schoenfeld, Jonathan D; Wucherpfennig, Kai W | Cell | 35803260 | 2022 Aug 04 |
| Wearable aptamer-field-effect transistor sensing system for noninvasive cortisol monitoring. | Wang, Bo; Zhao, Chuanzhen; Wang, Zhaoqing; Yang, Kyung-Ae; Cheng, Xuanbing; Liu, Wenfei; Yu, Wenzhuo; Lin, Shuyu; Zhao, Yichao; Cheung, Kevin M; Lin, Haisong; Hojaiji, Hannaneh; Weiss, Paul S; Stojanović, Milan N; Tomiyama, A Janet; Andrews, Anne M; Emaminejad, Sam | Science advances | 34985954 | 2022 Jan 07 |
| Simultaneous mapping of 3D structure and nascent RNAs argues against nuclear compartments that preclude transcription. | Goronzy, Isabel N; Quinodoz, Sofia A; Jachowicz, Joanna W; Ollikainen, Noah; Bhat, Prashant; Guttman, Mitchell | Cell reports | 36450242 | 2022 Nov 29 |
| MiOS, an integrated imaging and computational strategy to model gene folding with nucleosome resolution. | Neguembor, Maria Victoria; Arcon, Juan Pablo; Buitrago, Diana; Lema, Rafael; Walther, Jürgen; Garate, Ximena; Martin, Laura; Romero, Pablo; AlHaj Abed, Jumana; Gut, Marta; Blanc, Julie; Lakadamyali, Melike; Wu, Chao-Ting; Brun Heath, Isabelle; Orozco, Modesto; Dans, Pablo D; Cosma, Maria Pia | Nature structural & molecular biology | 36220894 | 2022 Oct |
| Isolation and Processing of Murine White Adipocytes for Transcriptome and Epigenome Analyses. | Yang, Chih-Hsiang; Longinotto, John; Panzeri, Ilaria; Arrigoni, Laura; Wegert, Vanessa; Heyne, Steffen; Seifert, Gabriel; Lempradl, Adelheid; Bönisch, Ulrike; Pospisilik, John Andrew | Journal of visualized experiments : JoVE | 35786676 | 2022 Jun 16 |
| Mortality of Mechanically Ventilated COVID-19 Patients in Traditional versus Expanded Intensive Care Units in New York. | Nishikimi, Mitsuaki; Jafari, Daniel; Singh, Neha; Shinozaki, Koichiro; Sison, Cristina P; Shoaib, Muhammad; Gong, Jonathan; Rasul, Rehana; Li, Timmy; Hayashida, Kei; Rolston, Daniel M; Miyara, Santiago J; Hirsch, Jamie S; Gandomi, Amir; White, Maureen T; Jarrett, Mark P; Lesser, Martin L; Becker, Lance B; Northwell Health COVID-19 Research Consortium | Annals of the American Thoracic Society | 35213292 | 2022 Aug |
| Expanding Knowledge and Changing Attitudes About Poverty: An Interactive, Interprofessional Approach. | Marrast, Lyndonna M; Chim, Christine; Tocco, Jack; Coletti, Daniel J; Nouryan, Christian; Block, Lauren; Martinez, Johanna | Journal of primary care & community health | 35225052 | 2022 |
| Series of virtual light therapy interventions for fatigue: a feasibility pilot study protocol for a series of personalised (N-of-1) trials. | Butler, Mark; D'Angelo, Stefani; Lewis, Courtney; Miller, Danielle; Perrin, Alexandra; Suls, Jerry; Chandereng, Thevaa; Cheung, Ying Kuen; Davidson, Karina W | BMJ open | 36283748 | 2022 Oct 25 |
| The Family of Single-Case Experimental Designs. | Epstein, Leonard H; Dallery, Jesse | Harvard data science review | 36926648 | 2022 |
| Synthetic mammalian signaling circuits for robust cell population control. | Ma, Yitong; Budde, Mark W; Mayalu, Michaëlle N; Zhu, Junqin; Lu, Andrew C; Murray, Richard M; Elowitz, Michael B | Cell | 35235768 | 2022 Mar 17 |
| Ozone Disinfection for Elimination of Bacteria and Degradation of SARS-CoV2 RNA for Medical Environments. | Westover, Craig; Rahmatulloev, Savlatjon; Danko, David; Afshin, Evan E; O'Hara, Niamh B; Ounit, Rachid; Bezdan, Daniela; Mason, Christopher E | Genes | 36672826 | 2022 Dec 28 |
| Barriers to and Facilitators for Acceptance of Comprehensive Clinical Decision Support System-Driven Care Maps for Patients With Thoracic Trauma: Interview Study Among Health Care Providers and Nurses. | Jones, Emma K; Banks, Alyssa; Melton, Genevieve B; Porta, Carolyn M; Tignanelli, Christopher J | JMIR human factors | 35293873 | 2022 Mar 16 |
| Association of race/ethnicity with mortality in patients hospitalized with COVID-19. | Richardson, Safiya; Martinez, Johanna; Hirsch, Jamie S; Cerise, Jane; Lesser, Martin; Roswell, Robert O; Davidson, Karina W; Northwell Health COVID-19 Research Consortium | PloS one | 35925973 | 2022 |
| Assessing the Validity of the Ask Suicide-Screening Questions in Black Youth. | Horowitz, Lisa M; Mournet, Annabelle M; Sheftall, Arielle; He, Jian-Ping; Lowry, Nathan J; Aguinaldo, Laika D; Sullivant, Shayla A; Wharff, Elizabeth A; Merikangas, Kathleen R; Pao, Maryland; Bridge, Jeffrey A | Journal of the Academy of Consultation-Liaison Psychiatry | 36273745 | 2022 Oct 20 |
| CIC missense variants contribute to susceptibility for spina bifida. | Han, Xiao; Cao, Xuanye; Aguiar-Pulido, Vanessa; Yang, Wei; Karki, Menuka; Ramirez, Paula Andrea Pimienta; Cabrera, Robert M; Lin, Ying Linda; Wlodarczyk, Bogdan J; Shaw, Gary M; Ross, M Elizabeth; Zhang, Cuilian; Finnell, Richard H; Lei, Yunping | Human mutation | 36054333 | 2022 Dec |
| Macroautophagy in CNS health and disease. | Griffey, Christopher J; Yamamoto, Ai | Nature reviews. Neuroscience | 35505254 | 2022 Jul |
| Emerging insights into the complex genetics and pathophysiology of amyotrophic lateral sclerosis. | Goutman, Stephen A; Hardiman, Orla; Al-Chalabi, Ammar; Chió, Adriano; Savelieff, Masha G; Kiernan, Matthew C; Feldman, Eva L | The Lancet. Neurology | 35334234 | 2022 May |
| Amyotrophic lateral sclerosis. | Feldman, Eva L; Goutman, Stephen A; Petri, Susanne; Mazzini, Letizia; Savelieff, Masha G; Shaw, Pamela J; Sobue, Gen | Lancet (London, England) | 36116464 | 2022 Oct 15 |
| HDACs regulate the differentiation of endothelial cells from human iPSCs. | Li, Tao; Wu, Haopeng; Wang, Pingping; Kim, Amy M; Jia, Junjing; Nolta, Jan A; Zhou, Ping | Cell biochemistry and function | 35789099 | 2022 Aug |
| Total-body PET/CT - First Clinical Experiences and Future Perspectives. | Ng, Quinn Kwan-Tai; Triumbari, Elizabeth Katherine Anna; Omidvari, Negar; Cherry, Simon R; Badawi, Ramsey D; Nardo, Lorenzo | Seminars in nuclear medicine | 35272853 | 2022 May |
| Relating18F-FDG image signal-to-noise ratio to time-of-flight noise-equivalent count rate in total-body PET using the uEXPLORER scanner. | Leung, Edwin K; Abdelhafez, Yasser G; Berg, Eric; Xie, Zhaoheng; Zhang, Xuezhu; Bayerlein, Reimund; Spencer, Benjamin; Li, Elizabeth; Omidvari, Negar; Selfridge, Aaron; Cherry, Simon R; Qi, Jinyi; Badawi, Ramsey D | Physics in medicine and biology | 35609588 | 2022 Jun 10 |
| Water-Soluble Luminescent Silicon Nanocrystals by Plasma-Induced Acrylic Acid Grafting and PEGylation. | Li, Zhaohan; Mahajan, Advitiya; Andaraarachchi, Himashi P; Lee, Yeonjoo; Kortshagen, Uwe R | ACS applied bio materials | 35014827 | 2022 Jan 17 |
| Distance-dependent resonance energy transfer in alkyl-terminated Si nanocrystal solids. | Li, Zhaohan; Robinson, Zachary L; Elvati, Paolo; Violi, Angela; Kortshagen, Uwe R | The Journal of chemical physics | 35364875 | 2022 Mar 28 |
| Tuning the Sensitivity of Genetically Encoded Fluorescent Potassium Indicators through Structure-Guided and Genome Mining Strategies. | Torres Cabán, Cristina C; Yang, Minghan; Lai, Cuixin; Yang, Lina; Subach, Fedor V; Smith, Brian O; Piatkevich, Kiryl D; Boyden, Edward S | ACS sensors | 35427452 | 2022 May 27 |
| Optogenetic Stimulation of Midbrain Dopamine Neurons Produces Striatal Serotonin Release. | Dagher, Merel; Perrotta, Katie A; Erwin, Sara A; Hachisuka, Ayaka; Iyer, Rahul; Masmanidis, Sotiris C; Yang, Hongyan; Andrews, Anne M | ACS chemical neuroscience | 35312275 | 2022 Apr 06 |
| The tumour-associated microbiome. | Johnston, Christopher D; Bullman, Susan | Nature reviews. Gastroenterology & hepatology | 35361914 | 2022 Jun |
| A bacterial pan-genome makes gene essentiality strain-dependent and evolvable. | Rosconi, Federico; Rudmann, Emily; Li, Jien; Surujon, Defne; Anthony, Jon; Frank, Matthew; Jones, Dakota S; Rock, Charles; Rosch, Jason W; Johnston, Christopher D; van Opijnen, Tim | Nature microbiology | 36097170 | 2022 Oct |
| Joint modeling of zero-inflated longitudinal proportions and time-to-event data with application to a gut microbiome study. | Hu, Jiyuan; Wang, Chan; Blaser, Martin J; Li, Huilin | Biometrics | 34213763 | 2022 Dec |
| In Silico Genome Analysis Reveals the Evolution and Potential Impact of SARS-CoV-2 Omicron Structural Changes on Host Immune Evasion and Antiviral Therapeutics. | Chauhan, Dhruv; Chakravarty, Nikhil; Jeyachandran, Arjit Vijey; Jayakarunakaran, Akshaya; Sinha, Sanjeev; Mishra, Rakesh; Arumugaswami, Vaithilingaraja; Ramaiah, Arunachalam | Viruses | 36366559 | 2022 Nov 06 |
| Cytomegalovirus infections in infants in Uganda: Newborn-mother pairs, neonates with sepsis, and infants with hydrocephalus. | Hehnly, Christine; Ssentongo, Paddy; Bebell, Lisa M; Burgoine, Kathy; Bazira, Joel; Fronterre, Claudio; Kumbakumba, Elias; Mulondo, Ronald; Mbabazi-Kabachelor, Edith; Morton, Sarah U; Ngonzi, Joseph; Ochora, Moses; Olupot-Olupot, Peter; Mugamba, John; Onen, Justin; Roberts, Drucilla J; Sheldon, Kathryn; Sinnar, Shamim A; Smith, Jasmine; Ssenyonga, Peter; Kiwanuka, Julius; Paulson, Joseph N; Meier, Frederick A; Ericson, Jessica E; Broach, James R; Schiff, Steven J | International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases | 35150915 | 2022 May |
| mirTarRnaSeq: An R/Bioconductor Statistical Package for miRNA-mRNA Target Identification and Interaction Analysis. | Movassagh, Mercedeh; Morton, Sarah U; Hehnly, Christine; Smith, Jasmine; Doan, Trang T; Irizarry, Rafael; Broach, James R; Schiff, Steven J; Bailey, Jeffrey A; Paulson, Joseph N | BMC genomics | 35698050 | 2022 Jun 13 |
| IDENTIFIABILITY OF INFECTION MODEL PARAMETERS EARLY IN AN EPIDEMIC. | Sauer, Timothy; Berry, Tyrus; Ebeigbe, Donald; Norton, Michael M; Whalen, Andrew J; Schiff, Steven J | SIAM journal on control and optimization | 36338855 | 2022 |
| RASA2 ablation in T cells boosts antigen sensitivity and long-term function. | Carnevale, Julia; Shifrut, Eric; Kale, Nupura; Nyberg, William A; Blaeschke, Franziska; Chen, Yan Yi; Li, Zhongmei; Bapat, Sagar P; Diolaiti, Morgan E; O'Leary, Patrick; Vedova, Shane; Belk, Julia; Daniel, Bence; Roth, Theodore L; Bachl, Stefanie; Anido, Alejandro Allo; Prinzing, Brooke; Ibañez-Vega, Jorge; Lange, Shannon; Haydar, Dalia; Luetke-Eversloh, Marie; Born-Bony, Maelys; Hegde, Bindu; Kogan, Scott; Feuchtinger, Tobias; Okada, Hideho; Satpathy, Ansuman T; Shannon, Kevin; Gottschalk, Stephen; Eyquem, Justin; Krenciute, Giedre; Ashworth, Alan; Marson, Alexander | Nature | 36002574 | 2022 Sep |
| Mouse characteristics that affect establishing xenografts from hepatocellular carcinoma patient biopsies in the United States. | Zou, Chenhui; El Dika, Imane; Vercauteren, Koen O A; Capanu, Marinela; Chou, Joanne; Shia, Jinru; Pilet, Jill; Quirk, Corrine; Lalazar, Gadi; Andrus, Linda; Kabbani, Mohammad; Yaqubie, Amin; Khalil, Danny; Mergoub, Taha; Chiriboga, Luis; Rice, Charles M; Abou-Alfa, Ghassan K; de Jong, Ype P | Cancer medicine | 34951132 | 2022 Feb |
| A Proximal-to-Distal Survey of Healthy Adult Human Small Intestine and Colon Epithelium by Single-Cell Transcriptomics. | Burclaff, Joseph; Bliton, R Jarrett; Breau, Keith A; Ok, Meryem T; Gomez-Martinez, Ismael; Ranek, Jolene S; Bhatt, Aadra P; Purvis, Jeremy E; Woosley, John T; Magness, Scott T | Cellular and molecular gastroenterology and hepatology | 35176508 | 2022 |
| Rational Design of Silicon-Based Zinc Ionophores. | Yamada, Kei; Deb, Arghya; Shoba, Veronika M; Lim, Donghyun; Maji, Basudeb; Modell, Ashley E; Choudhary, Amit | Angewandte Chemie (International ed. in English) | 35385189 | 2022 Jun 07 |
| Shared and Distinctive Neighborhoods of Emerin and Lamin B Receptor Revealed by Proximity Labeling and Quantitative Proteomics. | Cheng, Li-Chun; Zhang, Xi; Abhinav, Kanishk; Nguyen, Julie A; Baboo, Sabyasachi; Martinez-Bartolomé, Salvador; Branon, Tess C; Ting, Alice Y; Loose, Esther; Yates 3rd, John R; Gerace, Larry | Journal of proteome research | 35972904 | 2022 Sep 02 |
| Bite-size introduction to canine hematologic malignancies. | Atherton, Matthew J; Mason, Nicola J | Blood advances | 35316831 | 2022 Jul 12 |
| Plasmonic Nanoparticle Conjugation for Nucleic Acid Biosensing. | Tadimety, Amogha; Zhang, Yichen; Molinski, John H; Palinski, Timothy J; Tsongalis, Gregory J; Zhang, John X J | Methods in molecular biology (Clifton, N.J.) | 34837175 | 2022 |
| Induction of synapse formation by de novo neurotransmitter synthesis. | Burlingham, Scott R; Wong, Nicole F; Peterkin, Lindsay; Lubow, Lily; Dos Santos Passos, Carolina; Benner, Orion; Ghebrial, Michael; Cast, Thomas P; Xu-Friedman, Matthew A; Südhof, Thomas C; Chanda, Soham | Nature communications | 35650274 | 2022 Jun 01 |
| Regional synapse gain and loss accompany memory formation in larval zebrafish. | Dempsey, William P; Du, Zhuowei; Nadtochiy, Anna; Smith, Colton D; Czajkowski, Karl; Andreev, Andrey; Robson, Drew N; Li, Jennifer M; Applebaum, Serina; Truong, Thai V; Kesselman, Carl; Fraser, Scott E; Arnold, Don B | Proceedings of the National Academy of Sciences of the United States of America | 35031564 | 2022 Jan 18 |
| Compact RNA editors with small Cas13 proteins. | Kannan, Soumya; Altae-Tran, Han; Jin, Xin; Madigan, Victoria J; Oshiro, Rachel; Makarova, Kira S; Koonin, Eugene V; Zhang, Feng | Nature biotechnology | 34462587 | 2022 02 |
| Ultrabright Pdots with a Large Absorbance Cross Section and High Quantum Yield. | Zhang, Jicheng; Yu, Jiangbo; Jiang, Yifei; Chiu, Daniel T | ACS applied materials & interfaces | 35258939 | 2022 Mar 23 |
| Condensed-phase signaling can expand kinase specificity and respond to macromolecular crowding. | Sang, Dajun; Shu, Tong; Pantoja, Christian F; Ibáñez de Opakua, Alain; Zweckstetter, Markus; Holt, Liam J | Molecular cell | 36108633 | 2022 Oct 06 |
| Applications and Limitations of Oxime-Linked "Split PROTACs". | Gui, Weijun; Kodadek, Thomas | Chembiochem : a European journal of chemical biology | 35802347 | 2022 Sep 16 |
| Three Mutations Convert the Selectivity of a Protein Sensor from Nicotinic Agonists to S-Methadone for Use in Cells, Organelles, and Biofluids. | Muthusamy, Anand K; Kim, Charlene H; Virgil, Scott C; Knox, Hailey J; Marvin, Jonathan S; Nichols, Aaron L; Cohen, Bruce N; Dougherty, Dennis A; Looger, Loren L; Lester, Henry A | Journal of the American Chemical Society | 35446570 | 2022 05 18 |
| Cell type determination for cardiac differentiation occurs soon after seeding of human-induced pluripotent stem cells. | Jiang, Connie L; Goyal, Yogesh; Jain, Naveen; Wang, Qiaohong; Truitt, Rachel E; Coté, Allison J; Emert, Benjamin; Mellis, Ian A; Kiani, Karun; Yang, Wenli; Jain, Rajan; Raj, Arjun | Genome biology | 35382863 | 2022 Apr 05 |
| Cap-independent translation of GPLD1 enhances markers of brain health in long-lived mutant and drug-treated mice. | Li, Xinna; Shi, Xiaofang; McPherson, Madaline; Hager, Mary; Garcia, Gonzalo G; Miller, Richard A | Aging cell | 35930768 | 2022 Sep |
| CAQK, a peptide associating with extracellular matrix components targets sites of demyelinating injuries. | Abi-Ghanem, Charly; Jonnalagadda, Deepa; Chun, Jerold; Kihara, Yasuyuki; Ranscht, Barbara | Frontiers in cellular neuroscience | 36072569 | 2022 |
| Somatic genomic mosaicism in the brain: Identified mutations provide challenges and opportunities for the clinic. | Chun, Jerold | Med (New York, N.Y.) | 36242998 | 2022 Oct 14 |
| A single-administration therapeutic interfering particle reduces SARS-CoV-2 viral shedding and pathogenesis in hamsters. | Chaturvedi, Sonali; Beutler, Nathan; Vasen, Gustavo; Pablo, Michael; Chen, Xinyue; Calia, Giuliana; Buie, Lauren; Rodick, Robert; Smith, Davey; Rogers, Thomas; Weinberger, Leor S | Proceedings of the National Academy of Sciences of the United States of America | 36074824 | 2022 Sep 27 |
| Type IV Pili Are a Critical Virulence Factor in Clinical Isolates of Paenibacillus thiaminolyticus. | Hehnly, Christine; Shi, Aiqin; Ssentongo, Paddy; Zhang, Lijun; Isaacs, Albert; Morton, Sarah U; Streck, Nicholas; Erdmann-Gilmore, Petra; Tolstoy, Igor; Townsend, R Reid; Limbrick, David D; Paulson, Joseph N; Ericson, Jessica E; Galperin, Michael Y; Schiff, Steven J; Broach, James R | mBio | 36374038 | 2022 Dec 20 |
| Ingested (Oral) Adrenocorticotropic Hormone Inhibits IL-17 in the Central Nervous System in the Mouse Model of Multiple Sclerosis and Experimental Autoimmune Encephalomyelitis. | Dittel, Landon J; Dittel, Bonnie N; Brod, Staley A | ImmunoHorizons | 35868840 | 2022 Jul 22 |
| Flexible and Implantable Polyimide Aptamer-Field-Effect Transistor Biosensors. | Zhao, Chuanzhen; Man, Tianxing; Cao, Yan; Weiss, Paul S; Monbouquette, Harold G; Andrews, Anne M | ACS sensors | 36399772 | 2022 Dec 23 |
| Complete Genome Sequence of Clostridium cadaveris IFB3C5, Isolated from a Human Colonic Adenocarcinoma. | McGlinchey, Adam S; Zepeda-Rivera, Martha A; Stepanovica, Marija; Baryiames, Alexander A; Jones, Dakota S; LaCourse, Kaitlyn D; Bullman, Susan; Johnston, Christopher D | Microbiology resource announcements | 35234492 | 2022 Mar 17 |
| Synthesis and Screening of a DNA-Encoded Library of Non-Peptidic Macrocycles. | Koesema, Eric; Roy, Animesh; Paciaroni, Nicholas G; Coito, Carlos; Tokmina-Roszyk, Michal; Kodadek, Thomas | Angewandte Chemie (International ed. in English) | 35192245 | 2022 Apr 25 |
| Fluorescence Screens for Identifying Central Nervous System-Acting Drug-Biosensor Pairs for Subcellular and Supracellular Pharmacokinetics. | Beatty, Zoe G; Muthusamy, Anand K; Unger, Elizabeth K; Dougherty, Dennis A; Tian, Lin; Looger, Loren L; Shivange, Amol V; Bera, Kallol; Lester, Henry A; Nichols, Aaron L | Bio-protocol | 36532688 | 2022 Nov 20 |
| ClampFISH 2.0 enables rapid, scalable amplified RNA detection in situ. | Dardani, Ian; Emert, Benjamin L; Goyal, Yogesh; Jiang, Connie L; Kaur, Amanpreet; Lee, Jasmine; Rouhanifard, Sara H; Alicea, Gretchen M; Fane, Mitchell E; Xiao, Min; Herlyn, Meenhard; Weeraratna, Ashani T; Raj, Arjun | Nature methods | 36280724 | 2022 Nov |
| TRPV4: En RhoA To a Cure? | Lu, Qun; Chen, Yan-Hua | BioEssays : news and reviews in molecular, cellular and developmental biology | 35441721 | 2022 Jun |
| Social reactivation of fear engrams enhances memory recall. | Finkelstein, Abby Basya; Leblanc, Héloïse; Cole, Rebecca H; Gallerani, Troy; Vieira, Anahita; Zaki, Yosif; Ramirez, Steve | Proceedings of the National Academy of Sciences of the United States of America | 35286206 | 2022 Mar 22 |
| Functional genetic screen identifies ITPR3/calcium/RELB axis as a driver of colorectal cancer metastatic liver colonization. | Moy, Ryan H; Nguyen, Alexander; Loo, Jia Min; Yamaguchi, Norihiro; Kajba, Christina M; Santhanam, Balaji; Ostendorf, Benjamin N; Wu, Y Gloria; Tavazoie, Saeed; Tavazoie, Sohail F | Developmental cell | 35487218 | 2022 May 09 |
| 11C-Para-aminobenzoic acid PET imaging of S. aureus and MRSA infection in preclinical models and humans. | Ordonez, Alvaro A; Parker, Matthew Fl; Miller, Robert J; Plyku, Donika; Ruiz-Bedoya, Camilo A; Tucker, Elizabeth W; Luu, Justin M; Dikeman, Dustin A; Lesniak, Wojciech G; Holt, Daniel P; Dannals, Robert F; Miller, Lloyd S; Rowe, Steven P; Wilson, David M; Jain, Sanjay K | JCI insight | 35014627 | 2022 Jan 11 |
| Laser particle activated cell sorting in microfluidics. | Dannenberg, Paul H; Kang, Jisoo; Martino, Nicola; Kashiparekh, Anokhi; Forward, Sarah; Wu, Jiamin; Liapis, Andreas C; Wang, Jie; Yun, Seok-Hyun | Lab on a chip | 35621381 | 2022 Jun 14 |
| Now is the time to assess the effects of open science practiceswith randomized control trials. | Suls, Jerry; Rothman, Alexander J; Davidson, Karina W | The American psychologist | 34807632 | 2022 Apr |
| Scientific opportunities in resilience research for cardiovascular health and wellness. Report from a National Heart, Lung, and Blood Institute workshop. | Taylor, Herman A; Finkel, Toren; Gao, Yunling; Ballinger, Scott W; Campo, Rebecca; Chen, Rong; Chen, Shu Hui; Davidson, Karina; Iruela-Arispe, M Luisa; Jaquish, Cashell; LeBrasseur, Nathan K; Odden, Michelle C; Papanicolaou, George J; Picard, Martin; Srinivas, Pothur; Tjurmina, Olga; Wolz, Michael; Galis, Zorina S | FASEB journal : official publication of the Federation of American Societies for Experimental Biology | 36322029 | 2022 Dec |
| Cortical basis for skilled vocalization. | Cerkevich, Christina M; Rathelot, Jean-Alban; Strick, Peter L | Proceedings of the National Academy of Sciences of the United States of America | 35507879 | 2022 May 10 |
| Spatial CRISPR genomics identifies regulators of the tumor microenvironment. | Dhainaut, Maxime; Rose, Samuel A; Akturk, Guray; Wroblewska, Aleksandra; Nielsen, Sebastian R; Park, Eun Sook; Buckup, Mark; Roudko, Vladimir; Pia, Luisanna; Sweeney, Robert; Le Berichel, Jessica; Wilk, C Matthias; Bektesevic, Anela; Lee, Brian H; Bhardwaj, Nina; Rahman, Adeeb H; Baccarini, Alessia; Gnjatic, Sacha; Pe'er, Dana; Merad, Miriam; Brown, Brian D | Cell | 35290801 | 2022 Mar 31 |
| In Silico Identification and Experimental Validation of Peptide-Based Inhibitors Targeting Clostridium difficile Toxin A. | Xiao, Xingqing; Sarma, Sudeep; Menegatti, Stefano; Crook, Nathan; Magness, Scott T; Hall, Carol K | ACS chemical biology | 34965093 | 2022 Jan 21 |
| "Fix and Click" for Assay of Sphingolipid Signaling in Single Primary Human Intestinal Epithelial Cells. | Gallion, Luke A; Wang, Yuli; Massaro, Angelo; Yao, Ming; Petersen, Brae V; Zhang, Quanzheng; Huang, Weigang; Carr, Adam J; Zhang, Qisheng; Allbritton, Nancy L | Analytical chemistry | 35020354 | 2022 Jan 25 |
| A Planar Culture Model of Human Absorptive Enterocytes Reveals Metformin Increases Fatty Acid Oxidation and Export. | Gomez-Martinez, Ismael; Bliton, R Jarrett; Breau, Keith A; Czerwinski, Michael J; Williamson, Ian A; Wen, Jia; Rawls, John F; Magness, Scott T | Cellular and molecular gastroenterology and hepatology | 35489715 | 2022 |
| Efficient transgenesis and homology-directed gene targeting in monolayers of primary human small intestinal and colonic epithelial stem cells. | Breau, Keith A; Ok, Meryem T; Gomez-Martinez, Ismael; Burclaff, Joseph; Kohn, Nathan P; Magness, Scott T | Stem cell reports | 35523179 | 2022 Jun 14 |
| Citrobacter rodentium(ϕStx2dact), a murine infection model for enterohemorrhagic Escherichia coli. | Thorpe, Cheleste M; Pulsifer, Amanda R; Osburne, Marcia S; Vanaja, Sivapriya Kailasan; Leong, John M | Current opinion in microbiology | 34929548 | 2022 Feb |
| In situ cell-type-specific cell-surface proteomic profiling in mice. | Shuster, S Andrew; Li, Jiefu; Chon, URee; Sinantha-Hu, Miley C; Luginbuhl, David J; Udeshi, Namrata D; Carey, Dominique Kiki; Takeo, Yukari H; Xie, Qijing; Xu, Chuanyun; Mani, D R; Han, Shuo; Ting, Alice Y; Carr, Steven A; Luo, Liqun | Neuron | 36220098 | 2022 Dec 07 |
| ORAI1 Limits SARS-CoV-2 Infection by Regulating Tonic Type I IFN Signaling. | Wu, Beibei; Ramaiah, Arunachalam; Garcia Jr, Gustavo; Hasiakos, Spyridon; Arumugaswami, Vaithilingaraja; Srikanth, Sonal | Journal of immunology (Baltimore, Md. : 1950) | 34819389 | 2022 Jan 01 |
| Stoichiometric analysis reveals a unique phosphatidylserine binding site in coagulation factor X. | Paul, Divyani; Morrissey, James H | Journal of thrombosis and haemostasis : JTH | 34894064 | 2022 Mar |
| Structures of the TMC-1 complex illuminate mechanosensory transduction. | Jeong, Hanbin; Clark, Sarah; Goehring, April; Dehghani-Ghahnaviyeh, Sepehr; Rasouli, Ali; Tajkhorshid, Emad; Gouaux, Eric | Nature | 36224384 | 2022 Oct |
| Independent phenotypic plasticity axes define distinct obesity sub-types. | Yang, Chih-Hsiang; Fagnocchi, Luca; Apostle, Stefanos; Wegert, Vanessa; Casaní-Galdón, Salvador; Landgraf, Kathrin; Panzeri, Ilaria; Dror, Erez; Heyne, Steffen; Wörpel, Till; Chandler, Darrell P; Lu, Di; Yang, Tao; Gibbons, Elizabeth; Guerreiro, Rita; Bras, Jose; Thomasen, Martin; Grunnet, Louise G; Vaag, Allan A; Gillberg, Linn; Grundberg, Elin; Conesa, Ana; Körner, Antje; PERMUTE; Pospisilik, J Andrew | Nature metabolism | 36097183 | 2022 Sep |
| Buffer glucose adjustment affects myocardial function after ischemia-reperfusion in long-term diabetic rat isolated hearts. | Balzer, Claudius; Cleveland, William J; Li, Zhu; Riess, Matthias L | Physiological reports | 36324287 | 2022 Nov |
| Recent advances in the diagnosis and prognosis of amyotrophic lateral sclerosis. | Goutman, Stephen A; Hardiman, Orla; Al-Chalabi, Ammar; Chió, Adriano; Savelieff, Masha G; Kiernan, Matthew C; Feldman, Eva L | The Lancet. Neurology | 35334233 | 2022 May |
| Total-Body 18F-FDG PET/CT in Autoimmune Inflammatory Arthritis at Ultra-Low Dose: Initial Observations. | Abdelhafez, Yasser; Raychaudhuri, Siba P; Mazza, Dario; Sarkar, Soumajyoti; Hunt, Heather L; McBride, Kristin; Nguyen, Mike; Caudle, Denise T; Spencer, Benjamin A; Omidvari, Negar; Bang, Heejung; Cherry, Simon R; Nardo, Lorenzo; Badawi, Ramsey D; Chaudhari, Abhijit J | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 35589405 | 2022 Oct |
| Accumulation of endosymbiont genomes in an insect autosome followed by endosymbiont replacement. | Tvedte, Eric S; Gasser, Mark; Zhao, Xuechu; Tallon, Luke J; Sadzewicz, Lisa; Bromley, Robin E; Chung, Matthew; Mattick, John; Sparklin, Benjamin C; Dunning Hotopp, Julie C | Current biology : CB | 35671755 | 2022 Jun 20 |
| SARS-CoV-2 and its beta variant of concern infect human conjunctival epithelial cells and induce differential antiviral innate immune response. | Singh, Sneha; Garcia Jr, Gustavo; Shah, Ruchi; Kramerov, Andrei A; Wright 3rd, Robert Emery; Spektor, Tanya M; Ljubimov, Alexander V; Arumugaswami, Vaithilingaraja; Kumar, Ashok | The ocular surface | 34583089 | 2022 Jan |
| Replication-Deficient Zika Vector-Based Vaccine Provides Maternal and Fetal Protection in Mouse Model. | Garcia Jr, Gustavo; Chakravarty, Nikhil; Abu, Angel Elma; Jeyachandran, Arjit Vijey; Takano, Kari-Ann; Brown, Rebecca; Morizono, Kouki; Arumugaswami, Vaithilingaraja | Microbiology spectrum | 36169338 | 2022 Oct 26 |
| Hippo signaling pathway activation during SARS-CoV-2 infection contributes to host antiviral response. | Garcia Jr, Gustavo; Jeyachandran, Arjit Vijey; Wang, Yijie; Irudayam, Joseph Ignatius; Cario, Sebastian Castillo; Sen, Chandani; Li, Shen; Li, Yunfeng; Kumar, Ashok; Nielsen-Saines, Karin; French, Samuel W; Shah, Priya S; Morizono, Kouki; Gomperts, Brigitte N; Deb, Arjun; Ramaiah, Arunachalam; Arumugaswami, Vaithilingaraja | PLoS biology | 36346780 | 2022 Nov |
| A Novel EGFRvIII T-Cell Bispecific Antibody for the Treatment of Glioblastoma. | Iurlaro, Raffaella; Waldhauer, Inja; Planas-Rigol, Ester; Bonfill-Teixidor, Ester; Arias, Alexandra; Nicolini, Valeria; Freimoser-Grundschober, Anne; Cuartas, Isabel; Martínez-Moreno, Alba; Martínez-Ricarte, Francisco; Cordero, Esteban; Cicuendez, Marta; Casalino, Simona; Guardia-Reyes, Xavier; Fahrni, Linda; Pöschinger, Thomas; Steinhart, Virginie; Richard, Marine; Briner, Stefanie; Mueller, Joerg; Osl, Franz; Sam, Johannes; Colombetti, Sara; Bacac, Marina; Klein, Christian; Pineda, Estela; Reyes-Figueroa, Luis; Di Somma, Alberto; González, Josep; Nuciforo, Paolo; Carles, Joan; Vieito, Maria; Tabernero, Josep; Umaña, Pablo; Seoane, Joan | Molecular cancer therapeutics | 35915983 | 2022 Oct 07 |
| Changes in chromatin accessibility are not concordant with transcriptional changes for single-factor perturbations. | Kiani, Karun; Sanford, Eric M; Goyal, Yogesh; Raj, Arjun | Molecular systems biology | 36069349 | 2022 Sep |
| Identification of orphan ligand-receptor relationships using a cell-based CRISPRa enrichment screening platform. | Siepe, Dirk H; Henneberg, Lukas T; Wilson, Steven C; Hess, Gaelen T; Bassik, Michael C; Zinn, Kai; Garcia, K Christopher | eLife | 36178190 | 2022 Sep 30 |
| Prophylactic (R,S)-Ketamine Is Effective Against Stress-Induced Behaviors in Adolescent but Not Aged Mice. | Mastrodonato, Alessia; Pavlova, Ina; Kee, Noelle C; Pham, Van Anh; McGowan, Josephine C; Mann, J John; Denny, Christine A | The international journal of neuropsychopharmacology | 35229871 | 2022 Jun 21 |
| Conservation and divergence of cortical cell organization in human and mouse revealed by MERFISH. | Fang, Rongxin; Xia, Chenglong; Close, Jennie L; Zhang, Meng; He, Jiang; Huang, Zhengkai; Halpern, Aaron R; Long, Brian; Miller, Jeremy A; Lein, Ed S; Zhuang, Xiaowei | Science (New York, N.Y.) | 35771910 | 2022 Jul |
| Prostate Cancer Risk Stratification via Nondestructive 3D Pathology with Deep Learning-Assisted Gland Analysis. | Xie, Weisi; Reder, Nicholas P; Koyuncu, Can; Leo, Patrick; Hawley, Sarah; Huang, Hongyi; Mao, Chenyi; Postupna, Nadia; Kang, Soyoung; Serafin, Robert; Gao, Gan; Han, Qinghua; Bishop, Kevin W; Barner, Lindsey A; Fu, Pingfu; Wright, Jonathan L; Keene, C Dirk; Vaughan, Joshua C; Janowczyk, Andrew; Glaser, Adam K; Madabhushi, Anant; True, Lawrence D; Liu, Jonathan T C | Cancer research | 34853071 | 2022 Jan 15 |
| The context-dependent, combinatorial logic of BMP signaling. | Klumpe, Heidi E; Langley, Matthew A; Linton, James M; Su, Christina J; Antebi, Yaron E; Elowitz, Michael B | Cell systems | 35421361 | 2022 May 18 |
| Ligand-receptor promiscuity enables cellular addressing. | Su, Christina J; Murugan, Arvind; Linton, James M; Yeluri, Akshay; Bois, Justin; Klumpe, Heidi; Langley, Matthew A; Antebi, Yaron E; Elowitz, Michael B | Cell systems | 35421362 | 2022 May 18 |
| Z-α1-antitrypsin polymers impose molecular filtration in the endoplasmic reticulum after undergoing phase transition to a solid state. | Chambers, Joseph E; Zubkov, Nikita; Kubánková, Markéta; Nixon-Abell, Jonathon; Mela, Ioanna; Abreu, Susana; Schwiening, Max; Lavarda, Giulia; López-Duarte, Ismael; Dickens, Jennifer A; Torres, Tomás; Kaminski, Clemens F; Holt, Liam J; Avezov, Edward; Huntington, James A; George-Hyslop, Peter St; Kuimova, Marina K; Marciniak, Stefan J | Science advances | 35394846 | 2022 Apr 08 |
| Oligodendroglial macroautophagy is essential for myelin sheath turnover to prevent neurodegeneration and death. | Aber, Etan R; Griffey, Christopher J; Davies, Tim; Li, Alice M; Yang, Young Joo; Croce, Katherine R; Goldman, James E; Grutzendler, Jaime; Canman, Julie C; Yamamoto, Ai | Cell reports | 36261002 | 2022 Oct 18 |
| A genome-wide CRISPR screen identifies WDFY3 as a regulator of macrophage efferocytosis. | Shi, Jianting; Wu, Xun; Wang, Ziyi; Li, Fang; Meng, Yujiao; Moore, Rebecca M; Cui, Jian; Xue, Chenyi; Croce, Katherine R; Yurdagul Jr, Arif; Doench, John G; Li, Wei; Zarbalis, Konstantinos S; Tabas, Ira; Yamamoto, Ai; Zhang, Hanrui | Nature communications | 36566259 | 2022 Dec 24 |
| Variable selection with multiply-imputed datasets: choosing between stacked and grouped methods. | Du, Jiacong; Boss, Jonathan; Han, Peisong; Beesley, Lauren J; Kleinsasser, Michael; Goutman, Stephen A; Batterman, Stuart; Feldman, Eva L; Mukherjee, Bhramar | Journal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America | 36644406 | 2022 |
| An in silico method to assess antibody fragment polyreactivity. | Harvey, Edward P; Shin, Jung-Eun; Skiba, Meredith A; Nemeth, Genevieve R; Hurley, Joseph D; Wellner, Alon; Shaw, Ada Y; Miranda, Victor G; Min, Joseph K; Liu, Chang C; Marks, Debora S; Kruse, Andrew C | Nature communications | 36477674 | 2022 Dec 07 |
| The cancer chemotherapeutic 5-fluorouracil is a potent Fusobacterium nucleatum inhibitor and its activity is modified by intratumoral microbiota. | LaCourse, Kaitlyn D; Zepeda-Rivera, Martha; Kempchinsky, Andrew G; Baryiames, Alexander; Minot, Samuel S; Johnston, Christopher D; Bullman, Susan | Cell reports | 36384132 | 2022 Nov 15 |
| Effect of the intratumoral microbiota on spatial and cellular heterogeneity in cancer. | Galeano Niño, Jorge Luis; Wu, Hanrui; LaCourse, Kaitlyn D; Kempchinsky, Andrew G; Baryiames, Alexander; Barber, Brittany; Futran, Neal; Houlton, Jeffrey; Sather, Cassie; Sicinska, Ewa; Taylor, Alison; Minot, Samuel S; Johnston, Christopher D; Bullman, Susan | Nature | 36385528 | 2022 Nov |
| Engineering Modular 3D Liver Culture Microenvironments In Vitro to Parse the Interplay between Biophysical and Biochemical Microenvironment Cues on Hepatic Phenotypes. | Wang, Alex J; Allen, Allysa; Sofman, Marianna; Sphabmixay, Pierre; Yildiz, Ece; Griffith, Linda G | Advanced nanobiomed research | 35872804 | 2022 Jan |
| Inorganic-Organic Interpenetrating Network Hydrogels as Tissue-Integrating Luminescent Implants: Physicochemical Characterization and Preclinical Evaluation. | Unruh, Rachel M; Bornhoeft, Lindsey R; Nichols, Scott P; Wisniewski, Natalie A; McShane, Michael J | Macromolecular bioscience | 34847287 | 2022 Mar |
| Immunization with Genetically Modified Trypanosomes Provides Protection against Transmissible Spongiform Encephalopathies. | Triller, Gianna; Garyfallos, Dimitrios A; Papavasiliou, F Nina; Sklaviadis, Theodoros; Stavropoulos, Pete; Xanthopoulos, Konstantinos | International journal of molecular sciences | 36142526 | 2022 Sep 13 |
| Active genetics comes alive: Exploring the broad applications of CRISPR-based selfish genetic elements (or gene-drives): Exploring the broad applications of CRISPR-based selfish genetic elements (or gene-drives). | Gantz, Valentino M; Bier, Ethan | BioEssays : news and reviews in molecular, cellular and developmental biology | 35686327 | 2022 Aug |
| Machine learning in postgenomic biology and personalized medicine. | Ray, Animesh | Wiley interdisciplinary reviews. Data mining and knowledge discovery | 35966173 | 2022 |
| Structure of the Human BK Ion Channel in Lipid Environment. | Tonggu, Lige; Wang, Liguo | Membranes | 36005673 | 2022 Jul 31 |
| A natural fusion of flavodiiron, rubredoxin, and rubredoxin oxidoreductase domains is a self-sufficient water-forming oxidase of Trichomonas vaginalis. | Abdulaziz, Evana N; Bell, Tristan A; Rashid, Bazlur; Heacock, Mina L; Begic, Tarik; Skinner, Owen S; Yaseen, Mohammad A; Chao, Luke H; Mootha, Vamsi K; Pierik, Antonio J; Cracan, Valentin | The Journal of biological chemistry | 35780837 | 2022 Aug |
| Emerging rejuvenation strategies-Reducing the biological age. | Zhang, Bohan; Trapp, Alexandre; Kerepesi, Csaba; Gladyshev, Vadim N | Aging cell | 34972247 | 2022 Jan |
| Genetic architecture of natural variation of cardiac performance from flies to humans. | Saha, Saswati; Spinelli, Lionel; Castro Mondragon, Jaime A; Kervadec, Anaïs; Lynott, Michaela; Kremmer, Laurent; Roder, Laurence; Krifa, Sallouha; Torres, Magali; Brun, Christine; Vogler, Georg; Bodmer, Rolf; Colas, Alexandre R; Ocorr, Karen; Perrin, Laurent | eLife | 36383075 | 2022 Nov 16 |
| ABCDs of the Relative Contributions of Pseudomonas aeruginosa Quorum Sensing Systems to Virulence in Diverse Nonvertebrate Hosts. | Vasquez-Rifo, Alejandro; Cook, Jamie; McEwan, Deborah L; Shikara, Dania; Ausubel, Frederick M; Di Cara, Francesca; Cheng, Zhenyu | mBio | 35311532 | 2022 Apr 26 |
| Targeting transmembrane-domain-less MOG expression to platelets prevents disease development in experimental autoimmune encephalomyelitis. | Cai, Yuanhua; Schroeder, Jocelyn A; Jing, Weiqing; Gurski, Cody; Williams, Calvin B; Wang, Shaoyuan; Dittel, Bonnie N; Shi, Qizhen | Frontiers in immunology | 36389708 | 2022 |
| Targeting microRNA-mediated gene repression limits adipogenic conversion of skeletal muscle mesenchymal stromal cells. | Wosczyna, Michael N; Perez Carbajal, Edgar E; Wagner, Mark W; Paredes, Silvana; Konishi, Colin T; Liu, Ling; Wang, Theodore T; Walsh, Rachel A; Gan, Qiang; Morrissey, Christapher S; Rando, Thomas A | Cell stem cell | 33945794 | 2021 07 01 |
| Hairless regulates heterochromatin maintenance and muscle stem cell function as a histone demethylase antagonist. | Liu, Ling; Rodriguez-Mateo, Cristina; Huang, Polly; Huang, Albin; Lieu, Alexander; Mao, Michelle; Chung, Mingyu; Yang, Sharon; Yu, Kevin; Charville, Gregory W; Gan, Qiang; Rando, Thomas A | Proceedings of the National Academy of Sciences of the United States of America | 34493660 | 2021 09 14 |
| Exercise plasma boosts memory and dampens brain inflammation via clusterin. | De Miguel, Zurine; Khoury, Nathalie; Betley, Michael J; Lehallier, Benoit; Willoughby, Drew; Olsson, Niclas; Yang, Andrew C; Hahn, Oliver; Lu, Nannan; Vest, Ryan T; Bonanno, Liana N; Yerra, Lakshmi; Zhang, Lichao; Saw, Nay Lui; Fairchild, J Kaci; Lee, Davis; Zhang, Hui; McAlpine, Patrick L; Contrepois, Kévin; Shamloo, Mehrdad; Elias, Joshua E; Rando, Thomas A; Wyss-Coray, Tony | Nature | 34880498 | 2021 Dec |
| Meiotic Cas9 expression mediates gene conversion in the male and female mouse germline. | Weitzel, Alexander J; Grunwald, Hannah A; Weber, Ceri; Levina, Rimma; Gantz, Valentino M; Hedrick, Stephen M; Bier, Ethan; Cooper, Kimberly L | PLoS biology | 34941868 | 2021 Dec |
| Prevalence and determinants of cervical cancer screening in five sub-Saharan African countries: A population-based study. | Ba, Djibril M; Ssentongo, Paddy; Musa, Jonah; Agbese, Edeanya; Diakite, Brehima; Traore, Cheick Bougadari; Wang, Steve; Maiga, Mamoudou | Cancer epidemiology | 33756434 | 2021 06 |
| Short-term and Long-term Rates of Postacute Sequelae of SARS-CoV-2 Infection: A Systematic Review. | Groff, Destin; Sun, Ashley; Ssentongo, Anna E; Ba, Djibril M; Parsons, Nicholas; Poudel, Govinda R; Lekoubou, Alain; Oh, John S; Ericson, Jessica E; Ssentongo, Paddy; Chinchilli, Vernon M | JAMA network open | 34643720 | 2021 10 01 |
| Increased tissue stiffness triggers contractile dysfunction and telomere shortening in dystrophic cardiomyocytes. | Chang, Alex C Y; Pardon, Gaspard; Chang, Andrew C H; Wu, Haodi; Ong, Sang-Ging; Eguchi, Asuka; Ancel, Sara; Holbrook, Colin; Ramunas, John; Ribeiro, Alexandre J S; LaGory, Edward L; Wang, Honghui; Koleckar, Kassie; Giaccia, Amato; Mack, David L; Childers, Martin K; Denning, Chris; Day, John W; Wu, Joseph C; Pruitt, Beth L; Blau, Helen M | Stem cell reports | 34019816 | 2021 Sep 14 |
| A prion accelerates proliferation at the expense of lifespan. | Garcia, David M; Campbell, Edgar A; Jakobson, Christopher M; Tsuchiya, Mitsuhiro; Shaw, Ethan A; DiNardo, Acadia L; Kaeberlein, Matt; Jarosz, Daniel F | eLife | 34545808 | 2021 Sep 15 |
| Epigenetic clocks reveal a rejuvenation event during embryogenesis followed by aging. | Kerepesi, Csaba; Zhang, Bohan; Lee, Sang-Goo; Trapp, Alexandre; Gladyshev, Vadim N | Science advances | 34172448 | 2021 Jun |
| MARCO+ lymphatic endothelial cells sequester arthritogenic alphaviruses to limit viremia and viral dissemination. | Carpentier, Kathryn S; Sheridan, Ryan M; Lucas, Cormac J; Davenport, Bennett J; Li, Frances S; Lucas, Erin D; McCarthy, Mary K; Reynoso, Glennys V; May, Nicholas A; Tamburini, Beth A J; Hesselberth, Jay R; Hickman, Heather D; Morrison, Thomas E | The EMBO journal | 34618370 | 2021 11 15 |
| Safety and Immunogenicity of an Anti-Zika Virus DNA Vaccine. | Tebas, Pablo; Roberts, Christine C; Muthumani, Kar; Reuschel, Emma L; Kudchodkar, Sagar B; Zaidi, Faraz I; White, Scott; Khan, Amir S; Racine, Trina; Choi, Hyeree; Boyer, Jean; Park, Young K; Trottier, Sylvie; Remigio, Celine; Krieger, Diane; Spruill, Susan E; Bagarazzi, Mark; Kobinger, Gary P; Weiner, David B; Maslow, Joel N | The New England journal of medicine | 34525286 | 2021 Sep 16 |
| A Statistical Perspective on the Challenges in Molecular Microbial Biology. | Jeganathan, Pratheepa; Holmes, Susan P | Journal of agricultural, biological, and environmental statistics | 36398283 | 2021 Jun |
| Tissue-resident macrophages provide a pro-tumorigenic niche to early NSCLC cells. | Casanova-Acebes, María; Dalla, Erica; Leader, Andrew M; LeBerichel, Jessica; Nikolic, Jovan; Morales, Blanca M; Brown, Markus; Chang, Christie; Troncoso, Leanna; Chen, Steven T; Sastre-Perona, Ana; Park, Matthew D; Tabachnikova, Alexandra; Dhainaut, Maxime; Hamon, Pauline; Maier, Barbara; Sawai, Catherine M; Agulló-Pascual, Esperanza; Schober, Markus; Brown, Brian D; Reizis, Boris; Marron, Thomas; Kenigsberg, Ephraim; Moussion, Christine; Benaroch, Philippe; Aguirre-Ghiso, Julio A; Merad, Miriam | Nature | 34135508 | 2021 07 |
| Expansion sequencing: Spatially precise in situ transcriptomics in intact biological systems. | Alon, Shahar; Goodwin, Daniel R; Sinha, Anubhav; Wassie, Asmamaw T; Chen, Fei; Daugharthy, Evan R; Bando, Yosuke; Kajita, Atsushi; Xue, Andrew G; Marrett, Karl; Prior, Robert; Cui, Yi; Payne, Andrew C; Yao, Chun-Chen; Suk, Ho-Jun; Wang, Ru; Yu, Chih-Chieh Jay; Tillberg, Paul; Reginato, Paul; Pak, Nikita; Liu, Songlei; Punthambaker, Sukanya; Iyer, Eswar P R; Kohman, Richie E; Miller, Jeremy A; Lein, Ed S; Lako, Ana; Cullen, Nicole; Rodig, Scott; Helvie, Karla; Abravanel, Daniel L; Wagle, Nikhil; Johnson, Bruce E; Klughammer, Johanna; Slyper, Michal; Waldman, Julia; Jané-Valbuena, Judit; Rozenblatt-Rosen, Orit; Regev, Aviv; IMAXT Consortium; Church, George M; Marblestone, Adam H; Boyden, Edward S | Science (New York, N.Y.) | 33509999 | 2021 Jan 29 |
| A highly homogeneous polymer composed of tetrahedron-like monomers for high-isotropy expansion microscopy. | Gao, Ruixuan; Yu, Chih-Chieh Jay; Gao, Linyi; Piatkevich, Kiryl D; Neve, Rachael L; Munro, James B; Upadhyayula, Srigokul; Boyden, Edward S | Nature nanotechnology | 33782587 | 2021 06 |
| Use of liquid lithography to form in vitro intestinal crypts with varying microcurvature surrounding the stem cell niche. | Logan Howard, R; Wang, Yuli; Allbritton, Nancy L | Journal of micromechanics and microengineering : structures, devices, and systems | 35241878 | 2021 Dec |
| T cell circuits that sense antigen density with an ultrasensitive threshold. | Hernandez-Lopez, Rogelio A; Yu, Wei; Cabral, Katelyn A; Creasey, Olivia A; Lopez Pazmino, Maria Del Pilar; Tonai, Yurie; De Guzman, Arsenia; Mäkelä, Anna; Saksela, Kalle; Gartner, Zev J; Lim, Wendell A | Science (New York, N.Y.) | 33632893 | 2021 03 12 |
| Total-Body Quantitative Parametric Imaging of Early Kinetics of 18F-FDG. | Feng, Tao; Zhao, Yizhang; Shi, Hongcheng; Li, Hongdi; Zhang, Xuezhu; Wang, Guobao; Price, Patricia M; Badawi, Ramsey D; Cherry, Simon R; Jones, Terry | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 32948679 | 2021 05 10 |
| Total-Body PET Kinetic Modeling and Potential Opportunities Using Deep Learning. | Wang, Yiran; Li, Elizabeth; Cherry, Simon R; Wang, Guobao | PET clinics | 34353745 | 2021 Oct |
| Structure of mitotic chromosomes. | Beel, Andrew J; Azubel, Maia; Matteï, Pierre-Jean; Kornberg, Roger D | Molecular cell | 34520722 | 2021 11 04 |
| Proximity-dependent labeling methods for proteomic profiling in living cells: An update. | Bosch, Justin A; Chen, Chiao-Lin; Perrimon, Norbert | Wiley interdisciplinary reviews. Developmental biology | 32909689 | 2021 01 |
| Development of a blocker of the universal phosphatidylserine- and phosphatidylethanolamine-dependent viral entry pathways. | Song, Da-Hoon; Garcia Jr, Gustavo; Situ, Kathy; Chua, Bernadette A; Hong, Madeline Lauren O; Do, Elyza A; Ramirez, Christina M; Harui, Airi; Arumugaswami, Vaithilingaraja; Morizono, Kouki | Virology | 34020328 | 2021 08 |
| Neurological pathophysiology of SARS-CoV-2 and pandemic potential RNA viruses: a comparative analysis. | Chakravarty, Nikhil; Senthilnathan, Thrisha; Paiola, Sophia; Gyani, Priya; Castillo Cario, Sebastian; Urena, Estrella; Jeysankar, Akash; Jeysankar, Prakash; Ignatius Irudayam, Joseph; Natesan Subramanian, Sumathi; Lavretsky, Helen; Joshi, Shantanu; Garcia Jr, Gustavo; Ramaiah, Arunachalam; Arumugaswami, Vaithilingaraja | FEBS letters | 34757622 | 2021 12 |
| High resolution stereolithography fabrication of perfusable scaffolds to enable long-term meso-scale hepatic culture for disease modeling. | Sphabmixay, Pierre; Raredon, Micha Sam Brickman; Wang, Alex J-S; Lee, Howon; Hammond, Paula T; Fang, Nicholas X; Griffith, Linda G | Biofabrication | 34479229 | 2021 09 21 |
| The emerging landscape of single-molecule protein sequencing technologies. | Alfaro, Javier Antonio; Bohländer, Peggy; Dai, Mingjie; Filius, Mike; Howard, Cecil J; van Kooten, Xander F; Ohayon, Shilo; Pomorski, Adam; Schmid, Sonja; Aksimentiev, Aleksei; Anslyn, Eric V; Bedran, Georges; Cao, Chan; Chinappi, Mauro; Coyaud, Etienne; Dekker, Cees; Dittmar, Gunnar; Drachman, Nicholas; Eelkema, Rienk; Goodlett, David; Hentz, Sébastien; Kalathiya, Umesh; Kelleher, Neil L; Kelly, Ryan T; Kelman, Zvi; Kim, Sung Hyun; Kuster, Bernhard; Rodriguez-Larrea, David; Lindsay, Stuart; Maglia, Giovanni; Marcotte, Edward M; Marino, John P; Masselon, Christophe; Mayer, Michael; Samaras, Patroklos; Sarthak, Kumar; Sepiashvili, Lusia; Stein, Derek; Wanunu, Meni; Wilhelm, Mathias; Yin, Peng; Meller, Amit; Joo, Chirlmin | Nature methods | 34099939 | 2021 Jun |
| The integrated stress response mediates necrosis in murine Mycobacterium tuberculosis granulomas. | Bhattacharya, Bidisha; Xiao, Shiqi; Chatterjee, Sujoy; Urbanowski, Michael; Ordonez, Alvaro; Ihms, Elizabeth A; Agrahari, Garima; Lun, Shichun; Berland, Robert; Pichugin, Alexander; Gao, Yuanwei; Connor, John; Ivanov, Alexander R; Yan, Bo-Shiun; Kobzik, Lester; Koo, Bang-Bon; Jain, Sanjay; Bishai, William; Kramnik, Igor | The Journal of clinical investigation | 33301427 | 2021 02 01 |
| Strategies to Avoid Artifacts in Mass Spectrometry-Based Epitranscriptome Analyses. | Kaiser, Steffen; Byrne, Shane R; Ammann, Gregor; Asadi Atoi, Paria; Borland, Kayla; Brecheisen, Roland; DeMott, Michael S; Gehrke, Tim; Hagelskamp, Felix; Heiss, Matthias; Yoluç, Yasemin; Liu, Lili; Zhang, Qinghua; Dedon, Peter C; Cao, Bo; Kellner, Stefanie | Angewandte Chemie (International ed. in English) | 34339593 | 2021 10 25 |
| Chronic activation of fear engrams induces extinction-like behavior in ethanol-exposed mice. | Cincotta, Christine; Murawski, Nathen J; Grella, Stephanie L; McKissick, Olivia; Doucette, Emily; Ramirez, Steve | Hippocampus | 32946184 | 2021 01 |
| Propranolol Decreases Fear Expression by Modulating Fear Memory Traces. | Leal Santos, Sofia; Stackmann, Michelle; Muñoz Zamora, Andrea; Mastrodonato, Alessia; De Landri, Allegra V; Vaughan, Nick; Chen, Briana K; Lanio, Marcos; Denny, Christine A | Biological psychiatry | 33766406 | 2021 06 15 |
| Fluoroethylnormemantine, a Novel NMDA Receptor Antagonist, for the Prevention and Treatment of Stress-Induced Maladaptive Behavior. | Chen, Briana K; Luna, Victor M; Shannon, Margaret E; Hunsberger, Holly C; Mastrodonato, Alessia; Stackmann, Michelle; McGowan, Josephine C; Rubinstenn, Gilles; Denny, Christine A | Biological psychiatry | 34274107 | 2021 10 01 |
| Expectations and blind spots for structural variation detection from long-read assemblies and short-read genome sequencing technologies. | Zhao, Xuefang; Collins, Ryan L; Lee, Wan-Ping; Weber, Alexandra M; Jun, Yukyung; Zhu, Qihui; Weisburd, Ben; Huang, Yongqing; Audano, Peter A; Wang, Harold; Walker, Mark; Lowther, Chelsea; Fu, Jack; Human Genome Structural Variation Consortium; Gerstein, Mark B; Devine, Scott E; Marschall, Tobias; Korbel, Jan O; Eichler, Evan E; Chaisson, Mark J P; Lee, Charles; Mills, Ryan E; Brand, Harrison; Talkowski, Michael E | American journal of human genetics | 33789087 | 2021 05 06 |
| A serine loop in tissue factor mediates substrate selectivity by the tissue factor-factor VIIa complex. | Birkle, Fabienne; Morrissey, James H | Journal of thrombosis and haemostasis : JTH | 32885882 | 2021 01 |
| Binding mode of SARS-CoV-2 fusion peptide to human cellular membrane. | Gorgun, Defne; Lihan, Muyun; Kapoor, Karan; Tajkhorshid, Emad | Biophysical journal | 33675757 | 2021 07 20 |
| Fungicidal amphotericin B sponges are assemblies of staggered asymmetric homodimers encasing large void volumes. | Lewandowska, Agnieszka; Soutar, Corinne P; Greenwood, Alexander I; Nimerovsky, Evgeny; De Lio, Ashley M; Holler, Jordan T; Hisao, Grant S; Khandelwal, Anuj; Zhang, Jiabao; SantaMaria, Anna M; Schwieters, Charles D; Pogorelov, Taras V; Burke, Martin D; Rienstra, Chad M | Nature structural & molecular biology | 34887566 | 2021 Dec |
| Genetic screening for single-cell variability modulators driving therapy resistance. | Torre, Eduardo A; Arai, Eri; Bayatpour, Sareh; Jiang, Connie L; Beck, Lauren E; Emert, Benjamin L; Shaffer, Sydney M; Mellis, Ian A; Fane, Mitchell E; Alicea, Gretchen M; Budinich, Krista A; Weeraratna, Ashani T; Shi, Junwei; Raj, Arjun | Nature genetics | 33398196 | 2021 Jan |
| Shared B cell memory to coronaviruses and other pathogens varies in human age groups and tissues. | Yang, Fan; Nielsen, Sandra C A; Hoh, Ramona A; Röltgen, Katharina; Wirz, Oliver Fabian; Haraguchi, Emily; Jean, Grace H; Lee, Ji-Yeun; Pham, Tho D; Jackson, Katherine J L; Roskin, Krishna M; Liu, Yi; Nguyen, Khoa; Ohgami, Robert S; Osborne, Eleanor M; Nadeau, Kari C; Niemann, Claus U; Parsonnet, Julie; Boyd, Scott D | Science (New York, N.Y.) | 33846272 | 2021 05 14 |
| Significance of Multiple Adverse Social Determinants of Health on the Diagnosis, Control, and Management of Diabetes. | Kim, Eun Ji; Abrahams, Sara; Marrast, Lyndonna; Martinez, Johanna; Hanchate, Amresh D; Conigliaro, Joseph | Journal of general internal medicine | 32495092 | 2021 07 |
| Usefulness of Elevated Troponin to Predict Death in Patients With COVID-19 and Myocardial Injury. | Majure, David T; Gruberg, Luis; Saba, Shahryar G; Kvasnovsky, Charlotte; Hirsch, Jamie S; Jauhar, Rajiv; Northwell Health COVID-19 Research Consortium | The American journal of cardiology | 33058800 | 2021 01 01 |
| Experimental Designs to Optimize Treatments for Individuals: Personalized N-of-1 Trials. | Davidson, Karina W; Silverstein, Michael; Cheung, Ken; Paluch, Rocco A; Epstein, Leonard H | JAMA pediatrics | 33587109 | 2021 04 01 |
| Sex-Based Differences in COVID-19 Outcomes. | Tejpal, Astha; Gianos, Eugenia; Cerise, Jane; Hirsch, Jamie S; Rosen, Stacey; Kohn, Nina; Lesser, Martin; Weinberg, Catherine; Majure, David; Satapathy, Sanjaya K; Bernstein, David; Barish, Matthew A; Spyropoulos, Alex C; Brown, Rachel-Maria | Journal of women's health (2002) | 33885345 | 2021 04 |
| In-Hospital 30-Day Survival Among Young Adults With Coronavirus Disease 2019: A Cohort Study. | Richardson, Safiya; Gitlin, Jordan; Kozel, Zachary; Levy, Sera; Rahman, Husneara; Hirsch, Jamie S; McGinn, Thomas; Diefenbach, Michael A | Open forum infectious diseases | 34183983 | 2021 Jun |
| Barriers to the Use of Clinical Decision Support for the Evaluation of Pulmonary Embolism: Qualitative Interview Study. | Richardson, Safiya; Dauber-Decker, Katherine L; McGinn, Thomas; Barnaby, Douglas P; Cattamanchi, Adithya; Pekmezaris, Renee | JMIR human factors | 34346901 | 2021 Aug 04 |
| Single case designs for early phase behavioral translational research in health psychology. | Epstein, Leonard H; Bickel, Warren K; Czajkowski, Susan M; Paluch, Rocco A; Moeyaert, Mariola; Davidson, Karina W | Health psychology : official journal of the Division of Health Psychology, American Psychological Association | 34370494 | 2021 Dec |
| Lineage barcoding in mice with homing CRISPR. | Leeper, Kathleen; Kalhor, Kian; Vernet, Andyna; Graveline, Amanda; Church, George M; Mali, Prashant; Kalhor, Reza | Nature protocols | 33692551 | 2021 04 |
| Genome-wide investigation identifies a rare copy-number variant burden associated with human spina bifida. | Wolujewicz, Paul; Aguiar-Pulido, Vanessa; AbdelAleem, Alice; Nair, Vidya; Thareja, Gaurav; Suhre, Karsten; Shaw, Gary M; Finnell, Richard H; Elemento, Olivier; Ross, M Elizabeth | Genetics in medicine : official journal of the American College of Medical Genetics | 33686259 | 2021 07 |
| Cellular anatomy of the mouse primary motor cortex. | Muñoz-Castañeda, Rodrigo; Zingg, Brian; Matho, Katherine S; Chen, Xiaoyin; Wang, Quanxin; Foster, Nicholas N; Li, Anan; Narasimhan, Arun; Hirokawa, Karla E; Huo, Bingxing; Bannerjee, Samik; Korobkova, Laura; Park, Chris Sin; Park, Young-Gyun; Bienkowski, Michael S; Chon, Uree; Wheeler, Diek W; Li, Xiangning; Wang, Yun; Naeemi, Maitham; Xie, Peng; Liu, Lijuan; Kelly, Kathleen; An, Xu; Attili, Sarojini M; Bowman, Ian; Bludova, Anastasiia; Cetin, Ali; Ding, Liya; Drewes, Rhonda; D'Orazi, Florence; Elowsky, Corey; Fischer, Stephan; Galbavy, William; Gao, Lei; Gillis, Jesse; Groblewski, Peter A; Gou, Lin; Hahn, Joel D; Hatfield, Joshua T; Hintiryan, Houri; Huang, Junxiang Jason; Kondo, Hideki; Kuang, Xiuli; Lesnar, Philip; Li, Xu; Li, Yaoyao; Lin, Mengkuan; Lo, Darrick; Mizrachi, Judith; Mok, Stephanie; Nicovich, Philip R; Palaniswamy, Ramesh; Palmer, Jason; Qi, Xiaoli; Shen, Elise; Sun, Yu-Chi; Tao, Huizhong W; Wakemen, Wayne; Wang, Yimin; Yao, Shenqin; Yuan, Jing; Zhan, Huiqing; Zhu, Muye; Ng, Lydia; Zhang, Li I; Lim, Byung Kook; Hawrylycz, Michael; Gong, Hui; Gee, James C; Kim, Yongsoo; Chung, Kwanghun; Yang, X William; Peng, Hanchuan; Luo, Qingming; Mitra, Partha P; Zador, Anthony M; Zeng, Hongkui; Ascoli, Giorgio A; Josh Huang, Z; Osten, Pavel; Harris, Julie A; Dong, Hong-Wei | Nature | 34616071 | 2021 Oct |
| In vitro and in cellula site-directed RNA editing using the λNDD-BoxB system. | Ojha, Namrata; Diaz Quiroz, Juan Felipe; Rosenthal, Joshua J C | Methods in enzymology | 34517953 | 2021 |
| Intercellular Communication in the Nervous System Goes Viral. | Hantak, Michael P; Einstein, Jenifer; Kearns, Rachel B; Shepherd, Jason D | Trends in neurosciences | 33485691 | 2021 04 |
| Imaging and optogenetic modulation of vascular mural cells in the live brain. | Tong, Lei; Hill, Robert A; Damisah, Eyiyemisi C; Murray, Katie N; Yuan, Peng; Bordey, Angelique; Grutzendler, Jaime | Nature protocols | 33299155 | 2021 01 |
| Intralipid Increases Nitric Oxide Release from Human Endothelial Cells During Oxidative Stress. | Weihrauch, Dorothee; Shumpert, Stephen D; Larson, Michael E; McVey, Natalie; Krolikowski, John G; Bamkole, Omoshalewa; Riess, Matthias L | JPEN. Journal of parenteral and enteral nutrition | 32291784 | 2021 02 |
| Morphological characterization of Etv2 vascular explants using fractal analysis and atomic force microscopy. | Adelson, Robert P; Palikuqi, Brisa; Weiss, Zachary; Checco, Antonio; Schreiner, Ryan; Rafii, Shahin; Rabbany, Sina Y | Microvascular research | 34146583 | 2021 11 |
| Flexible Electrostatic Transducer Array with Displacement Control for Haptic Sensing and Actuation. | Trase, Ian; Tan, Hong Z; Chen, Zi; Zhang, John X J | Sensors and actuators. A, Physical | 33380777 | 2021 Jan 01 |
| Microfluidic In Situ Patterning of Silver Nanoparticles for Surface-Enhanced Raman Spectroscopic Sensing of Biomolecules. | Nie, Yuan; Jin, Congran; Zhang, John X J | ACS sensors | 34148342 | 2021 07 23 |
| RNA timestamps identify the age of single molecules in RNA sequencing. | Rodriques, Samuel G; Chen, Linlin M; Liu, Sophia; Zhong, Ellen D; Scherrer, Joseph R; Boyden, Edward S; Chen, Fei | Nature biotechnology | 33077959 | 2021 03 |
| Pluripotent stem cell-derived models of neurological diseases reveal early transcriptional heterogeneity. | Sorek, Matan; Oweis, Walaa; Nissim-Rafinia, Malka; Maman, Moria; Simon, Shahar; Hession, Cynthia C; Adiconis, Xian; Simmons, Sean K; Sanjana, Neville E; Shi, Xi; Lu, Congyi; Pan, Jen Q; Xu, Xiaohong; Pouladi, Mahmoud A; Ellerby, Lisa M; Zhang, Feng; Levin, Joshua Z; Meshorer, Eran | Genome biology | 33663567 | 2021 Mar 04 |
| LAMP-Seq enables sensitive, multiplexed COVID-19 diagnostics using molecular barcoding. | Ludwig, Kerstin U; Schmithausen, Ricarda M; Li, David; Jacobs, Max L; Hollstein, Ronja; Blumenstock, Katja; Liebing, Jana; Słabicki, Mikołaj; Ben-Shmuel, Amir; Israeli, Ofir; Weiss, Shay; Ebert, Thomas S; Paran, Nir; Rüdiger, Wibke; Wilbring, Gero; Feldman, David; Lippke, Bärbel; Ishorst, Nina; Hochfeld, Lara M; Beins, Eva C; Kaltheuner, Ines H; Schmitz, Maximilian; Wöhler, Aliona; Döhla, Manuel; Sib, Esther; Jentzsch, Marius; Moench, Eva-Maria C; Borrajo, Jacob D; Strecker, Jonathan; Reinhardt, Julia; Cleary, Brian; Geyer, Matthias; Hölzel, Michael; Macrae, Rhiannon; Nöthen, Markus M; Hoffmann, Per; Exner, Martin; Regev, Aviv; Zhang, Feng; Schmid-Burgk, Jonathan L | Nature biotechnology | 34188222 | 2021 Dec |
| Integrating barcoded neuroanatomy with spatial transcriptional profiling enables identification of gene correlates of projections. | Sun, Yu-Chi; Chen, Xiaoyin; Fischer, Stephan; Lu, Shaina; Zhan, Huiqing; Gillis, Jesse; Zador, Anthony M | Nature neuroscience | 33972801 | 2021 Jun |
| Applying deductive reasoning and the principles of particle physics to aging research. | Moldakozhayev, Alibek; Tskhay, Albina; Gladyshev, Vadim N | Aging | 34543232 | 2021 09 20 |
| Profiling epigenetic age in single cells. | Trapp, Alexandre; Kerepesi, Csaba; Gladyshev, Vadim N | Nature aging | 36211119 | 2021 Dec |
| Molecular Damage in Aging. | Gladyshev, Vadim N; Kritchevsky, Stephen B; Clarke, Steven G; Cuervo, Ana Maria; Fiehn, Oliver; de Magalhães, João Pedro; Mau, Theresa; Maes, Michal; Moritz, Robert; Niedernhofer, Laura J; Van Schaftingen, Emile; Tranah, Gregory J; Walsh, Kenneth; Yura, Yoshimitsu; Zhang, Bohan; Cummings, Steven R | Nature aging | 36846190 | 2021 Dec |
| Altered cell and RNA isoform diversity in aging Down syndrome brains. | Palmer, Carter R; Liu, Christine S; Romanow, William J; Lee, Ming-Hsiang; Chun, Jerold | Proceedings of the National Academy of Sciences of the United States of America | 34795060 | 2021 11 23 |
| Skin-resident natural killer T cells participate in cutaneous allergic inflammation in atopic dermatitis. | Sun, ZhengWang; Kim, Ji Hye; Kim, Seo Hyeong; Kim, Hye Ran; Zhang, KeLun; Pan, Youdong; Ko, Min Kyung; Kim, Bo Mi; Chu, Howard; Lee, Hee Ra; Kim, Hye Li; Kim, Ji Hyung; Fu, Xiujun; Hyun, Young-Min; Yun, Ki Na; Kim, Jin Young; Lee, Dong Won; Song, Seung Yong; Lin, Charles P; Clark, Rachael A; Lee, Kwang Hoon; Kupper, Thomas S; Park, Chang Ook | The Journal of allergy and clinical immunology | 33516870 | 2021 05 |
| A Critical Role for Fas-Mediated Off-Target Tumor Killing in T-cell Immunotherapy. | Upadhyay, Ranjan; Boiarsky, Jonathan A; Pantsulaia, Gvantsa; Svensson-Arvelund, Judit; Lin, Matthew J; Wroblewska, Aleksandra; Bhalla, Sherry; Scholler, Nathalie; Bot, Adrian; Rossi, John M; Sadek, Norah; Parekh, Samir; Lagana, Alessandro; Baccarini, Alessia; Merad, Miriam; Brown, Brian D; Brody, Joshua D | Cancer discovery | 33334730 | 2021 03 |
| Oncologic Applications of Long Axial Field-of-View PET/Computed Tomography. | Nardo, Lorenzo; Pantel, Austin R | PET clinics | 33218605 | 2021 Jan |
| Quantitative accuracy in total-body imaging using the uEXPLORER PET/CT scanner. | Leung, Edwin K; Berg, Eric; Omidvari, Negar; Spencer, Benjamin A; Li, Elizabeth; Abdelhafez, Yasser G; Schmall, Jeffrey P; Liu, Weiping; He, Liuchun; Tang, Songsong; Liu, Yilin; Dong, Yun; Jones, Terry; Cherry, Simon R; Badawi, Ramsey D | Physics in medicine and biology | 34544074 | 2021 10 11 |
| Mechanism of gating and partial agonist action in the glycine receptor. | Yu, Jie; Zhu, Hongtao; Lape, Remigijus; Greiner, Timo; Du, Juan; Lü, Wei; Sivilotti, Lucia; Gouaux, Eric | Cell | 33567265 | 2021 Feb 18 |
| pH-Responsive Charge-Conversion Progelator Peptides. | Carlini, Andrea S; Choi, Wonmin; McCallum, Naneki C; Gianneschi, Nathan C | Advanced functional materials | 36530181 | 2021 Mar 24 |
| Identifying Novel Susceptibility Genes for Colorectal Cancer Risk From a Transcriptome-Wide Association Study of 125,478 Subjects. | Guo, Xingyi; Lin, Weiqiang; Wen, Wanqing; Huyghe, Jeroen; Bien, Stephanie; Cai, Qiuyin; Harrison, Tabitha; Chen, Zhishan; Qu, Conghui; Bao, Jiandong; Long, Jirong; Yuan, Yuan; Wang, Fangqin; Bai, Mengqiu; Abecasis, Goncalo R; Albanes, Demetrius; Berndt, Sonja I; Bézieau, Stéphane; Bishop, D Timothy; Brenner, Hermann; Buch, Stephan; Burnett-Hartman, Andrea; Campbell, Peter T; Castellví-Bel, Sergi; Chan, Andrew T; Chang-Claude, Jenny; Chanock, Stephen J; Cho, Sang Hee; Conti, David V; Chapelle, Albert de la; Feskens, Edith J M; Gallinger, Steven J; Giles, Graham G; Goodman, Phyllis J; Gsur, Andrea; Guinter, Mark; Gunter, Marc J; Hampe, Jochen; Hampel, Heather; Hayes, Richard B; Hoffmeister, Michael; Kampman, Ellen; Kang, Hyun Min; Keku, Temitope O; Kim, Hyeong Rok; Le Marchand, Loic; Lee, Soo Chin; Li, Christopher I; Li, Li; Lindblom, Annika; Lindor, Noralane; Milne, Roger L; Moreno, Victor; Murphy, Neil; Newcomb, Polly A; Nickerson, Deborah A; Offit, Kenneth; Pearlman, Rachel; Pharoah, Paul D P; Platz, Elizabeth A; Potter, John D; Rennert, Gad; Sakoda, Lori C; Schafmayer, Clemens; Schmit, Stephanie L; Schoen, Robert E; Schumacher, Fredrick R; Slattery, Martha L; Su, Yu-Ru; Tangen, Catherine M; Ulrich, Cornelia M; van Duijnhoven, Franzel J B; Van Guelpen, Bethany; Visvanathan, Kala; Vodicka, Pavel; Vodickova, Ludmila; Vymetalkova, Veronika; Wang, Xiaoliang; White, Emily; Wolk, Alicja; Woods, Michael O; Casey, Graham; Hsu, Li; Jenkins, Mark A; Gruber, Stephen B; Peters, Ulrike; Zheng, Wei | Gastroenterology | 33058866 | 2021 Mar |
| Loss of synergistic transcriptional feedback loops drives diverse B-cell cancers. | Andrews, Jared M; Pyfrom, Sarah C; Schmidt, Jennifer A; Koues, Olivia I; Kowalewski, Rodney A; Grams, Nicholas R; Sun, Jessica J; Berman, Leigh R; Duncavage, Eric J; Lee, Yi-Shan; Cashen, Amanda F; Oltz, Eugene M; Payton, Jacqueline E | EBioMedicine | 34461601 | 2021 Sep |
| Integration of Multitargeted Polymer-Based Contrast Agents with Photoacoustic Computed Tomography: An Imaging Technique to Visualize Breast Cancer Intratumor Heterogeneity. | Li, Lei; Patil, Deepanjali; Petruncio, Greg; Harnden, Kathleen K; Somasekharan, Jisha V; Paige, Mikell; Wang, Lihong V; Salvador-Morales, Carolina | ACS nano | 33464827 | 2021 02 23 |
| Snapshot photoacoustic topography through an ergodic relay of optical absorption in vivo. | Li, Lei; Li, Yang; Zhang, Yide; Wang, Lihong V | Nature protocols | 33846630 | 2021 May |
| Photoacoustic Computed Tomography of Breast Cancer in Response to Neoadjuvant Chemotherapy. | Lin, Li; Tong, Xin; Hu, Peng; Invernizzi, Marta; Lai, Lily; Wang, Lihong V | Advanced science (Weinheim, Baden-Wurttemberg, Germany) | 33854889 | 2021 04 |
| Multiscale Photoacoustic Tomography of a Genetically Encoded Near-Infrared FRET Biosensor. | Li, Lei; Hsu, Hsun-Chia; Verkhusha, Vladislav V; Wang, Lihong V; Shcherbakova, Daria M | Advanced science (Weinheim, Baden-Wurttemberg, Germany) | 34533889 | 2021 11 |
| Rapid generation of potent antibodies by autonomous hypermutation in yeast. | Wellner, Alon; McMahon, Conor; Gilman, Morgan S A; Clements, Jonathan R; Clark, Sarah; Nguyen, Kianna M; Ho, Ming H; Hu, Vincent J; Shin, Jung-Eun; Feldman, Jared; Hauser, Blake M; Caradonna, Timothy M; Wingler, Laura M; Schmidt, Aaron G; Marks, Debora S; Abraham, Jonathan; Kruse, Andrew C; Liu, Chang C | Nature chemical biology | 34168368 | 2021 10 |
| In vivo visualization of butterfly scale cell morphogenesis in Vanessa cardui. | McDougal, Anthony D; Kang, Sungsam; Yaqoob, Zahid; So, Peter T C; Kolle, Mathias | Proceedings of the National Academy of Sciences of the United States of America | 34845021 | 2021 Dec 07 |
| Integrative microphysiological tissue systems of cancer metastasis to the liver. | Clark, Amanda M; Allbritton, Nancy L; Wells, Alan | Seminars in cancer biology | 32580025 | 2021 06 |
| Spatiotemporally-resolved mapping of RNA binding proteins via functional proximity labeling reveals a mitochondrial mRNA anchor promoting stress recovery. | Qin, Wei; Myers, Samuel A; Carey, Dominique K; Carr, Steven A; Ting, Alice Y | Nature communications | 34404792 | 2021 08 17 |
| Coordination of tumor growth and host wasting by tumor-derived Upd3. | Ding, Guangming; Xiang, Xiaoxiang; Hu, Yanhui; Xiao, Gen; Chen, Yuchen; Binari, Richard; Comjean, Aram; Li, Jiaying; Rushworth, Elisabeth; Fu, Zhenming; Mohr, Stephanie E; Perrimon, Norbert; Song, Wei | Cell reports | 34407411 | 2021 08 17 |
| Proximity-Labeling Reveals Novel Host and Parasite Proteins at the Toxoplasma Parasitophorous Vacuole Membrane. | Cygan, Alicja M; Jean Beltran, Pierre M; Mendoza, Alma G; Branon, Tess C; Ting, Alice Y; Carr, Steven A; Boothroyd, John C | mBio | 34749525 | 2021 12 21 |
| Transcription-mediated supercoiling regulates genome folding and loop formation. | Neguembor, Maria Victoria; Martin, Laura; Castells-García, Álvaro; Gómez-García, Pablo Aurelio; Vicario, Chiara; Carnevali, Davide; AlHaj Abed, Jumana; Granados, Alba; Sebastian-Perez, Ruben; Sottile, Francesco; Solon, Jérôme; Wu, Chao-Ting; Lakadamyali, Melike; Cosma, Maria Pia | Molecular cell | 34297911 | 2021 08 05 |
| Racial and ethnic minority patient participation in N-of-1 trials: perspectives of healthcare providers and patients. | Marrast, Lyndonna; Conigliaro, Joseph; Chan, Camille; Kim, Eun Ji; Duer-Hefele, Joan; Diefenbach, Michael A; Davidson, Karina W | Personalized medicine | 34047197 | 2021 07 |
| Accomplishing breakthroughs in behavioural medicine research. | Davidson, Karina W; Bacon, Simon L; Bennett, Gary G; Brondolo, Elizabeth; Czajkowski, Susan M; Diefenbach, Michael A; Epel, Elissa S; Matthews, Karen; Revenson, Tracey A; Ruiz, John Manuel; Segerstrom, Suzanne C; Behavioral Medicine Research Council | Nature human behaviour | 34127817 | 2021 Jul |
| Recording Temporal Signals with Minutes Resolution Using Enzymatic DNA Synthesis. | Bhan, Namita; Callisto, Alec; Strutz, Jonathan; Glaser, Joshua; Kalhor, Reza; Boyden, Edward S; Church, George; Kording, Konrad; Tyo, Keith E J | Journal of the American Chemical Society | 34591459 | 2021 10 13 |
| Multiple signaling pathways are essential for synapse formation induced by synaptic adhesion molecules. | Jiang, Xian; Sando, Richard; Südhof, Thomas C | Proceedings of the National Academy of Sciences of the United States of America | 33431662 | 2021 01 19 |
| Altered Neuronal Support and Inflammatory Response in Bipolar Disorder Patient-Derived Astrocytes. | Vadodaria, Krishna C; Mendes, Ana P D; Mei, Arianna; Racha, Vipula; Erikson, Galina; Shokhirev, Maxim N; Oefner, Ruth; Heard, Kelly J; McCarthy, Michael J; Eyler, Lisa; Kelsoe, John R; Santos, Renata; Marchetto, Maria C; Gage, Fred H | Stem cell reports | 33667413 | 2021 04 13 |
| Integrated spatial genomics reveals global architecture of single nuclei. | Takei, Yodai; Yun, Jina; Zheng, Shiwei; Ollikainen, Noah; Pierson, Nico; White, Jonathan; Shah, Sheel; Thomassie, Julian; Suo, Shengbao; Eng, Chee-Huat Linus; Guttman, Mitchell; Yuan, Guo-Cheng; Cai, Long | Nature | 33505024 | 2021 02 |
| Basophils add fuel to the flame of eczema itch. | Mali, Sonali S; Bautista, Diana M | Cell | 33482094 | 2021 01 21 |
| Characterization of the public transit air microbiome and resistome reveals geographical specificity. | Leung, M H Y; Tong, X; Bøifot, K O; Bezdan, D; Butler, D J; Danko, D C; Gohli, J; Green, D C; Hernandez, M T; Kelly, F J; Levy, S; Mason-Buck, G; Nieto-Caballero, M; Syndercombe-Court, D; Udekwu, K; Young, B G; Mason, C E; Dybwad, M; Lee, P K H | Microbiome | 34039416 | 2021 05 26 |
| Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study. | Foox, Jonathan; Tighe, Scott W; Nicolet, Charles M; Zook, Justin M; Byrska-Bishop, Marta; Clarke, Wayne E; Khayat, Michael M; Mahmoud, Medhat; Laaguiby, Phoebe K; Herbert, Zachary T; Warner, Derek; Grills, George S; Jen, Jin; Levy, Shawn; Xiang, Jenny; Alonso, Alicia; Zhao, Xia; Zhang, Wenwei; Teng, Fei; Zhao, Yonggang; Lu, Haorong; Schroth, Gary P; Narzisi, Giuseppe; Farmerie, William; Sedlazeck, Fritz J; Baldwin, Don A; Mason, Christopher E | Nature biotechnology | 34504351 | 2021 Sep |
| BARcode DEmixing through Non-negative Spatial Regression (BarDensr). | Chen, Shuonan; Loper, Jackson; Chen, Xiaoyin; Vaughan, Alex; Zador, Anthony M; Paninski, Liam | PLoS computational biology | 33684106 | 2021 03 |
| Examination of patient characteristics and hydroxychloroquine use based on the US Food and Drug Administration's recommendation: a cross-sectional analysis in New York. | Kim, Eun Ji; Coppa, Kevin; Hirsch, Jamie S; Abrahams, Sara; Johnson, Jennifer; Lesser, Martin; Davidson, Karina W; Conigliaro, Joseph; Northwell Health COVID-19 Research Consortium; Northwell Health COVID-19 Research Consortium | BMJ open | 33558355 | 2021 02 08 |
| Intubated COVID-19 predictive (ICOP) score for early mortality after intubation in patients with COVID-19. | Nishikimi, Mitsuaki; Rasul, Rehana; Sison, Cristina P; Jafari, Daniel; Shoaib, Muhammad; Shinozaki, Koichiro; Li, Timmy; Hayashida, Kei; Rolston, Daniel M; Hirsch, Jamie S; Becker, Lance B; Northwell Health COVID-19 Research Consortium | Scientific reports | 34702896 | 2021 10 26 |
| FMRP regulates mRNAs encoding distinct functions in the cell body and dendrites of CA1 pyramidal neurons. | Hale, Caryn R; Sawicka, Kirsty; Mora, Kevin; Fak, John J; Kang, Jin Joo; Cutrim, Paula; Cialowicz, Katarzyna; Carroll, Thomas S; Darnell, Robert B | eLife | 34939924 | 2021 Dec 23 |
| Kernel k-Groups via Hartigan's Method. | Franca, Guilherme; Rizzo, Maria L; Vogelstein, Joshua T | IEEE transactions on pattern analysis and machine intelligence | 32750776 | 2021 Dec |
| Behavioral and neurobiological effects of GnRH agonist treatment in mice-potential implications for puberty suppression in transgender individuals. | Anacker, Christoph; Sydnor, Ezra; Chen, Briana K; LaGamma, Christina C; McGowan, Josephine C; Mastrodonato, Alessia; Hunsberger, Holly C; Shores, Ryan; Dixon, Rushell S; McEwen, Bruce S; Byne, William; Meyer-Bahlburg, Heino F L; Bockting, Walter; Ehrhardt, Anke A; Denny, Christine A | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | 32919399 | 2021 04 |
| Scanner Design Considerations for Long Axial Field-of-View PET Systems. | Daube-Witherspoon, Margaret E; Cherry, Simon R | PET clinics | 33160929 | 2021 Jan |
| 3D/4D Reconstruction and Quantitative Total Body Imaging. | Qi, Jinyi; Matej, Samuel; Wang, Guobao; Zhang, Xuezhu | PET clinics | 33218603 | 2021 Jan |
| Protein design and variant prediction using autoregressive generative models. | Shin, Jung-Eun; Riesselman, Adam J; Kollasch, Aaron W; McMahon, Conor; Simon, Elana; Sander, Chris; Manglik, Aashish; Kruse, Andrew C; Marks, Debora S | Nature communications | 33893299 | 2021 04 23 |
| In situ genome sequencing resolves DNA sequence and structure in intact biological samples. | Payne, Andrew C; Chiang, Zachary D; Reginato, Paul L; Mangiameli, Sarah M; Murray, Evan M; Yao, Chun-Chen; Markoulaki, Styliani; Earl, Andrew S; Labade, Ajay S; Jaenisch, Rudolf; Church, George M; Boyden, Edward S; Buenrostro, Jason D; Chen, Fei | Science (New York, N.Y.) | 33384301 | 2021 02 26 |
| Narrower Nanoribbon Biosensors Fabricated by Chemical Lift-off Lithography Show Higher Sensitivity. | Zhao, Chuanzhen; Liu, Qingzhou; Cheung, Kevin M; Liu, Wenfei; Yang, Qing; Xu, Xiaobin; Man, Tianxing; Weiss, Paul S; Zhou, Chongwu; Andrews, Anne M | ACS nano | 33337135 | 2021 01 26 |
| Implantable aptamer-field-effect transistor neuroprobes for in vivo neurotransmitter monitoring. | Zhao, Chuanzhen; Cheung, Kevin M; Huang, I-Wen; Yang, Hongyan; Nakatsuka, Nako; Liu, Wenfei; Cao, Yan; Man, Tianxing; Weiss, Paul S; Monbouquette, Harold G; Andrews, Anne M | Science advances | 34818033 | 2021 Nov 26 |
| Complete Genome Sequence of Arachnia rubra Strain DSM 100122T, a Cultured Member of the Human Oral Microbiome. | Ouellette, Matthew; Bejian, Andrew A; Chen, Tsute; Jones, Dakota S; Johnston, Christopher D; Dewhirst, Floyd E | Microbiology resource announcements | 34854708 | 2021 Dec 02 |
| Harnessing the microbiome to restore immunotherapy response. | Bullman, Susan; Eggermont, Alexander; Johnston, Christopher D; Zitvogel, Laurence | Nature cancer | 35121929 | 2021 Dec |
| Capsules for biomedical image segmentation. | LaLonde, Rodney; Xu, Ziyue; Irmakci, Ismail; Jain, Sanjay; Bagci, Ulas | Medical image analysis | 33246227 | 2021 02 |
| Kit-based synthesis of 2-deoxy-2-[18F]-fluoro-D-sorbitol for bacterial imaging. | Mota, Filipa; De Jesus, Patricia; Jain, Sanjay K | Nature protocols | 34686858 | 2021 Nov |
| Organophosphorus flame retardants are developmental neurotoxicants in a rat primary brainsphere in vitro model. | Hogberg, Helena T; de Cássia da Silveira E Sá, Rita; Kleensang, Andre; Bouhifd, Mounir; Cemiloglu Ulker, Ozge; Smirnova, Lena; Behl, Mamta; Maertens, Alexandra; Zhao, Liang; Hartung, Thomas | Archives of toxicology | 33078273 | 2021 01 |
| COVID-19 mortality rate in children is U-shaped. | Khera, Nina; Santesmasses, Didac; Kerepesi, Csaba; Gladyshev, Vadim N | Aging | 34411000 | 2021 08 18 |
| Identification of a therapeutic interfering particle-A single-dose SARS-CoV-2 antiviral intervention with a high barrier to resistance. | Chaturvedi, Sonali; Vasen, Gustavo; Pablo, Michael; Chen, Xinyue; Beutler, Nathan; Kumar, Arjun; Tanner, Elizabeth; Illouz, Sylvia; Rahgoshay, Donna; Burnett, John; Holguin, Leo; Chen, Pei-Yi; Ndjamen, Blaise; Ott, Melanie; Rodick, Robert; Rogers, Thomas; Smith, Davey M; Weinberger, Leor S | Cell | 34838159 | 2021 Dec 09 |
| Pan-African evolution of within- and between-country COVID-19 dynamics. | Ssentongo, Paddy; Fronterre, Claudio; Geronimo, Andrew; Greybush, Steven J; Mbabazi, Pamela K; Muvawala, Joseph; Nahalamba, Sarah B; Omadi, Philip O; Opar, Bernard T; Sinnar, Shamim A; Wang, Yan; Whalen, Andrew J; Held, Leonhard; Jewell, Christopher; Muwanguzi, Abraham J B; Greatrex, Helen; Norton, Michael M; Diggle, Peter J; Schiff, Steven J | Proceedings of the National Academy of Sciences of the United States of America | 34187879 | 2021 Jul 13 |
| Brain growth after surgical treatment for infant postinfectious hydrocephalus in Sub-Saharan Africa: 2-year results of a randomized trial. | Schiff, Steven J; Kulkarni, Abhaya V; Mbabazi-Kabachelor, Edith; Mugamba, John; Ssenyonga, Peter; Donnelly, Ruth; Levenbach, Jody; Monga, Vishal; Peterson, Mallory; Cherukuri, Venkateswararao; Warf, Benjamin C | Journal of neurosurgery. Pediatrics | 34243157 | 2021 Jul 09 |
| The Cortical Motor Areas and the Emergence of Motor Skills: A Neuroanatomical Perspective. | Strick, Peter L; Dum, Richard P; Rathelot, Jean-Alban | Annual review of neuroscience | 33863253 | 2021 07 08 |
| High-speed three-dimensional photoacoustic computed tomography for preclinical research and clinical translation. | Lin, Li; Hu, Peng; Tong, Xin; Na, Shuai; Cao, Rui; Yuan, Xiaoyun; Garrett, David C; Shi, Junhui; Maslov, Konstantin; Wang, Lihong V | Nature communications | 33563996 | 2021 Feb 09 |
| A host metabolite promotes Salmonella survival. | Lynch, Jason P; Lesser, Cammie F | Science (New York, N.Y.) | 33479138 | 2021 01 22 |
| Proteomics of protein trafficking by in vivo tissue-specific labeling. | Droujinine, Ilia A; Meyer, Amanda S; Wang, Dan; Udeshi, Namrata D; Hu, Yanhui; Rocco, David; McMahon, Jill A; Yang, Rui; Guo, JinJin; Mu, Luye; Carey, Dominique K; Svinkina, Tanya; Zeng, Rebecca; Branon, Tess; Tabatabai, Areya; Bosch, Justin A; Asara, John M; Ting, Alice Y; Carr, Steven A; McMahon, Andrew P; Perrimon, Norbert | Nature communications | 33888706 | 2021 Apr 22 |
| Proximity labeling reveals non-centrosomal microtubule-organizing center components required for microtubule growth and localization. | Sanchez, Ariana D; Branon, Tess C; Cote, Lauren E; Papagiannakis, Alexandros; Liang, Xing; Pickett, Melissa A; Shen, Kang; Jacobs-Wagner, Christine; Ting, Alice Y; Feldman, Jessica L | Current biology : CB | 34242576 | 2021 08 23 |
| Visualizing the dynamics of tuberculosis pathology using molecular imaging. | Ordonez, Alvaro A; Tucker, Elizabeth W; Anderson, Carolyn J; Carter, Claire L; Ganatra, Shashank; Kaushal, Deepak; Kramnik, Igor; Lin, Philana L; Madigan, Cressida A; Mendez, Susana; Rao, Jianghong; Savic, Rada M; Tobin, David M; Walzl, Gerhard; Wilkinson, Robert J; Lacourciere, Karen A; Via, Laura E; Jain, Sanjay K | The Journal of clinical investigation | 33645551 | 2021 03 01 |
| Imaging Enterobacterales infections in patients using pathogen-specific positron emission tomography. | Ordonez, Alvaro A; Wintaco, Luz M; Mota, Filipa; Restrepo, Andres F; Ruiz-Bedoya, Camilo A; Reyes, Carlos F; Uribe, Luis G; Abhishek, Sudhanshu; D'Alessio, Franco R; Holt, Daniel P; Dannals, Robert F; Rowe, Steven P; Castillo, Victor R; Pomper, Martin G; Granados, Ulises; Jain, Sanjay K | Science translational medicine | 33853931 | 2021 04 14 |
| Genetic re-direction of canine primary T cells for clinical trial use in pet dogs with spontaneous cancer. | Rotolo, Antonia; Atherton, Matthew J; Kasper, Brian T; Haran, Kumudhini P; Mason, Nicola J | STAR protocols | 34746864 | 2021 Dec 17 |
| Venous Waveform Analysis Correlates With Echocardiography in Detecting Hypovolemia in a Rat Hemorrhage Model. | Lefevre, Ryan J; Balzer, Claudius; Baudenbacher, Franz J; Riess, Matthias L; Hernandez, Antonio; Eagle, Susan S | Seminars in cardiothoracic and vascular anesthesia | 32957831 | 2021 Mar |
| To eat, or not to eat, that is the question: Neural stem cells escape phagocytosis in autism with macrocephaly. | Schafer, Simon T; Gage, Fred H | Proceedings of the National Academy of Sciences of the United States of America | 33883269 | 2021 05 11 |
| Giotto: a toolbox for integrative analysis and visualization of spatial expression data. | Dries, Ruben; Zhu, Qian; Dong, Rui; Eng, Chee-Huat Linus; Li, Huipeng; Liu, Kan; Fu, Yuntian; Zhao, Tianxiao; Sarkar, Arpan; Bao, Feng; George, Rani E; Pierson, Nico; Cai, Long; Yuan, Guo-Cheng | Genome biology | 33685491 | 2021 Mar 08 |
| Programmable protein circuit design. | Chen, Zibo; Elowitz, Michael B | Cell | 33848464 | 2021 04 29 |
| Assessing the replicability of spatial gene expression using atlas data from the adult mouse brain. | Lu, Shaina; Ortiz, Cantin; Fürth, Daniel; Fischer, Stephan; Meletis, Konstantinos; Zador, Anthony; Gillis, Jesse | PLoS biology | 34280183 | 2021 07 |
| Conformational changes in the nucleotide-binding domains of P-glycoprotein induced by ATP hydrolysis. | Dehghani-Ghahnaviyeh, Sepehr; Kapoor, Karan; Tajkhorshid, Emad | FEBS letters | 33159693 | 2021 03 |
| A cancer mutation promotes EphA4 oligomerization and signaling by altering the conformation of the SAM domain. | Light, Taylor P; Gomez-Soler, Maricel; Wang, Zichen; Karl, Kelly; Zapata-Mercado, Elmer; Gehring, Marina P; Lechtenberg, Bernhard C; Pogorelov, Taras V; Hristova, Kalina; Pasquale, Elena B | The Journal of biological chemistry | 34139238 | 2021 07 |
| PIP2-dependent coupling of voltage sensor and pore domains in Kv7.2 channel. | Pant, Shashank; Zhang, Jiaren; Kim, Eung Chang; Lam, Kin; Chung, Hee Jung; Tajkhorshid, Emad | Communications biology | 34650221 | 2021 10 14 |
| Fluoroethylnormemantine, A Novel Derivative of Memantine, Facilitates Extinction Learning Without Sensorimotor Deficits. | Chen, Briana K; Le Pen, Gwenaëlle; Eckmier, Adam; Rubinstenn, Gilles; Jay, Therese M; Denny, Christine A | The international journal of neuropsychopharmacology | 33631001 | 2021 07 14 |
| Phenoxy Radical Reactivity of Nucleic Acids: Practical Implications for Biotinylation. | Wilbanks, Brandon; Garcia, Brian; Byrne, Shane; Dedon, Peter; Maher 3rd, L James | Chembiochem : a European journal of chemical biology | 33368926 | 2021 04 16 |
| Ectopic cervical thymi and no thymic involution until midlife in naked mole rats. | Emmrich, Stephan; Tolibzoda Zakusilo, Frances; Trapp, Alexandre; Zhou, Xuming; Zhang, Quanwei; Irving, Ellen M; Drage, Michael G; Zhang, Zhengdong; Gladyshev, Vadim N; Seluanov, Andrei; Gorbunova, Vera | Aging cell | 34596321 | 2021 Oct |
| Genomic Mosaicism Formed by Somatic Variation in the Aging and Diseased Brain. | Costantino, Isabel; Nicodemus, Juliet; Chun, Jerold | Genes | 34356087 | 2021 07 14 |
| Characterization of Definitive Regulatory B Cell Subsets by Cell Surface Phenotype, Function and Context. | Neu, Savannah D; Dittel, Bonnie N | Frontiers in immunology | 34987513 | 2021 |
| Gun violence incidence during the COVID-19 pandemic is higher than before the pandemic in the United States. | Ssentongo, Paddy; Fronterre, Claudio; Ssentongo, Anna E; Advani, Shailesh; Heilbrunn, Emily S; Hazelton, Joshua P; Oh, John S; McCall-Hosenfeld, Jennifer S; Chinchilli, Vernon M | Scientific reports | 34675321 | 2021 10 21 |
| Conserved Gammaherpesvirus Protein Kinase Counters the Antiviral Effects of Myeloid Cell-Specific STAT1 Expression To Promote the Establishment of Splenic B Cell Latency. | Sylvester, P A; Jondle, C N; Stoltz, K P; Lanham, J; Dittel, B N; Tarakanova, V L | Journal of virology | 34132573 | 2021 08 10 |
| Pharmacological and genetic perturbation establish SIRT5 as a promising target in breast cancer. | Abril, Yashira L Negrón; Fernandez, Irma R; Hong, Jun Young; Chiang, Ying-Ling; Kutateladze, Dennis A; Zhao, Qingjie; Yang, Min; Hu, Jing; Sadhukhan, Sushabhan; Li, Bo; He, Bin; Remick, Brenna; Bai, Jessica Jingyi; Mullmann, James; Wang, Fangyu; Maymi, Viviana; Dhawan, Ravi; Auwerx, Johan; Southard, Teresa; Cerione, Richard A; Lin, Hening; Weiss, Robert S | Oncogene | 33479498 | 2021 03 |
| Clinical Implementation of Total-Body PET/CT at University of California, Davis. | Nardo, Lorenzo; Abdelhafez, Yasser G; Spencer, Benjamin A; Badawi, Ramsey D | PET clinics | 33218600 | 2021 Jan |
| Performance Characteristics of Long Axial Field-of-View PET Scanners with Axial Gaps. | Daube-Witherspoon, Margaret E; Viswanath, Varsha; Werner, Matthew E; Karp, Joel S | IEEE transactions on radiation and plasma medical sciences | 34179595 | 2021 May |
| Comparison of long-read sequencing technologies in interrogating bacteria and fly genomes. | Tvedte, Eric S; Gasser, Mark; Sparklin, Benjamin C; Michalski, Jane; Hjelmen, Carl E; Johnston, J Spencer; Zhao, Xuechu; Bromley, Robin; Tallon, Luke J; Sadzewicz, Lisa; Rasko, David A; Dunning Hotopp, Julie C | G3 (Bethesda, Md.) | 33768248 | 2021 Jun 17 |
| Pim kinase inhibitor co-treatment decreases alternative non-homologous end-joining DNA repair and genomic instability induced by topoisomerase 2 inhibitors in cells with FLT3 internal tandem duplication. | Scarpa, Mario; Kapoor, Shivani; Tvedte, Eric S; Doshi, Kshama A; Zou, Ying S; Singh, Prerna; Lee, Jonelle K; Chatterjee, Aditi; Ali, Moaath K Mustafa; Bromley, Robin E; Hotopp, Julie C Dunning; Rassool, Feyruz V; Baer, Maria R | Oncotarget | 34504649 | 2021 Aug 31 |
| Structures and topological defects in pressure-driven lyotropic chromonic liquid crystals. | Zhang, Qing; Zhang, Rui; Ge, Baoliang; Yaqoob, Zahid; So, Peter T C; Bischofberger, Irmgard | Proceedings of the National Academy of Sciences of the United States of America | 34446562 | 2021 08 31 |
| Simultaneous serotonin and dopamine monitoring across timescales by rapid pulse voltammetry with partial least squares regression. | Movassaghi, Cameron S; Perrotta, Katie A; Yang, Hongyan; Iyer, Rahul; Cheng, Xinyi; Dagher, Merel; Fillol, Miguel Alcañiz; Andrews, Anne M | Analytical and bioanalytical chemistry | 34686897 | 2021 Nov |
| The relationship between gastrointestinal cancers and the microbiota. | LaCourse, Kaitlyn D; Johnston, Christopher D; Bullman, Susan | The lancet. Gastroenterology & hepatology | 33743198 | 2021 06 |
| Genomic Stability and Genetic Defense Systems in Dolosigranulum pigrum, a Candidate Beneficial Bacterium from the Human Microbiome. | Flores Ramos, Stephany; Brugger, Silvio D; Escapa, Isabel Fernandez; Skeete, Chelsey A; Cotton, Sean L; Eslami, Sara M; Gao, Wei; Bomar, Lindsey; Tran, Tommy H; Jones, Dakota S; Minot, Samuel; Roberts, Richard J; Johnston, Christopher D; Lemon, Katherine P | mSystems | 34546072 | 2021 Oct 26 |
| Machine learning of EEG spectra classifies unconsciousness during GABAergic anesthesia. | Abel, John H; Badgeley, Marcus A; Meschede-Krasa, Benyamin; Schamberg, Gabriel; Garwood, Indie C; Lecamwasam, Kimaya; Chakravarty, Sourish; Zhou, David W; Keating, Matthew; Purdon, Patrick L; Brown, Emery N | PloS one | 33956800 | 2021 |
| Pathogenic LMNA variants disrupt cardiac lamina-chromatin interactions and de-repress alternative fate genes. | Shah, Parisha P; Lv, Wenjian; Rhoades, Joshua H; Poleshko, Andrey; Abbey, Deepti; Caporizzo, Matthew A; Linares-Saldana, Ricardo; Heffler, Julie G; Sayed, Nazish; Thomas, Dilip; Wang, Qiaohong; Stanton, Liam J; Bedi, Kenneth; Morley, Michael P; Cappola, Thomas P; Owens, Anjali T; Margulies, Kenneth B; Frank, David B; Wu, Joseph C; Rader, Daniel J; Yang, Wenli; Prosser, Benjamin L; Musunuru, Kiran; Jain, Rajan | Cell stem cell | 33529599 | 2021 05 06 |
| Selective axonal translation of the mRNA isoform encoding prenylated Cdc42 supports axon growth. | Lee, Seung Joon; Zdradzinski, Matthew D; Sahoo, Pabitra K; Kar, Amar N; Patel, Priyanka; Kawaguchi, Riki; Aguilar, Byron J; Lantz, Kelsey D; McCain, Caylee R; Coppola, Giovanni; Lu, Qun; Twiss, Jeffery L | Journal of cell science | 33674450 | 2021 04 01 |
| The cell biology of synapse formation. | Südhof, Thomas C | The Journal of cell biology | 34086051 | 2021 Jul 05 |
| Imaging cell lineage with a synthetic digital recording system. | Chow, Ke-Huan K; Budde, Mark W; Granados, Alejandro A; Cabrera, Maria; Yoon, Shinae; Cho, Soomin; Huang, Ting-Hao; Koulena, Noushin; Frieda, Kirsten L; Cai, Long; Lois, Carlos; Elowitz, Michael B | Science (New York, N.Y.) | 33833095 | 2021 04 09 |
| A Versatile Multichannel Instrument for Measurement of Ratiometric Fluorescence Intensity and Phosphorescence Lifetime. | Zavareh, Amir Tofighi; Ko, Brian; Roberts, Jason; Elahi, Sakib; McShane, Michael J | IEEE access : practical innovations, open solutions | 34858770 | 2021 |
| An early experience on the effect of solid organ transplant status on hospitalized COVID-19 patients. | Nair, Vinay; Jandovitz, Nicholas; Hirsch, Jamie S; Abate, Mersema; Satapathy, Sanjaya K; Roth, Nitzan; Miyara, Santiago J; Guevara, Sara; Kressel, Adam M; Xiang, Alec; Wu, Grace; Butensky, Samuel D; Lin, David; Williams, Stephanie; Bhaskaran, Madhu C; Majure, David T; Grodstein, Elliot; Lau, Lawrence; Nair, Gayatri; Fahmy, Ahmed E; Winnick, Aaron; Breslin, Nadine; Berlinrut, Ilan; Molmenti, Christine; Becker, Lance B; Malhotra, Prashant; Gautam-Goyal, Pranisha; Lima, Brian; Maybaum, Simon; Shah, Samit K; Takegawa, Ryosuke; Hayashida, Kei; Shinozaki, Koichiro; Teperman, Lewis W; Molmenti, Ernesto P; Northwell Health COVID-19 Research Consortium | American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons | 33443778 | 2021 Jul |
| A Machine Learning Prediction Model of Respiratory Failure Within 48 Hours of Patient Admission for COVID-19: Model Development and Validation. | Bolourani, Siavash; Brenner, Max; Wang, Ping; McGinn, Thomas; Hirsch, Jamie S; Barnaby, Douglas; Zanos, Theodoros P; Northwell COVID-19 Research Consortium | Journal of medical Internet research | 33476281 | 2021 02 10 |
| Effectiveness of SARS-CoV-2 Decontamination and Containment in a COVID-19 ICU. | Brune, Zarina; Kuschner, Cyrus E; Mootz, Joseph; Davidson, Karina W; Pena, Robert C F; Ghanem, Mustafa H; Fischer, Austin; Gitman, Michael; Teperman, Lewis; Mason, Christopher; Becker, Lance B | International journal of environmental research and public health | 33802332 | 2021 03 03 |
| Molecular self-avoidance in synaptic neurexin complexes. | Wang, Cosmos Yuqi; Trotter, Justin H; Liakath-Ali, Kif; Lee, Sung-Jin; Liu, Xinran; Südhof, Thomas C | Science advances | 34919427 | 2021 Dec 17 |
| CloudReg: automatic terabyte-scale cross-modal brain volume registration. | Chandrashekhar, Vikram; Tward, Daniel J; Crowley, Devin; Crow, Ailey K; Wright, Matthew A; Hsueh, Brian Y; Gore, Felicity; Machado, Timothy A; Branch, Audrey; Rosenblum, Jared S; Deisseroth, Karl; Vogelstein, Joshua T | Nature methods | 34253927 | 2021 08 |
| The evolution of red color vision is linked to coordinated rhodopsin tuning in lycaenid butterflies. | Liénard, Marjorie A; Bernard, Gary D; Allen, Andrew; Lassance, Jean-Marc; Song, Siliang; Childers, Richard Rabideau; Yu, Nanfang; Ye, Dajia; Stephenson, Adriana; Valencia-Montoya, Wendy A; Salzman, Shayla; Whitaker, Melissa R L; Calonje, Michael; Zhang, Feng; Pierce, Naomi E | Proceedings of the National Academy of Sciences of the United States of America | 33547236 | 2021 02 09 |
| Intercellular Arc Signaling Regulates Vasodilation. | de la Peña, June Bryan; Barragan-Iglesias, Paulino; Lou, Tzu-Fang; Kunder, Nikesh; Loerch, Sarah; Shukla, Tarjani; Basavarajappa, Lokesh; Song, Jane; James, Dominique N; Megat, Salim; Moy, Jamie K; Wanghzou, Andi; Ray, Pradipta R; Hoyt, Kenneth; Steward, Oswald; Price, Theodore J; Shepherd, Jason; Campbell, Zachary T | The Journal of neuroscience : the official journal of the Society for Neuroscience | 34326146 | 2021 09 15 |
| T cells selectively filter oscillatory signals on the minutes timescale. | O'Donoghue, Geoff P; Bugaj, Lukasz J; Anderson, Warren; Daniels, Kyle G; Rawlings, David J; Lim, Wendell A | Proceedings of the National Academy of Sciences of the United States of America | 33627405 | 2021 03 02 |
| SynNotch-CAR T cells overcome challenges of specificity, heterogeneity, and persistence in treating glioblastoma. | Choe, Joseph H; Watchmaker, Payal B; Simic, Milos S; Gilbert, Ryan D; Li, Aileen W; Krasnow, Nira A; Downey, Kira M; Yu, Wei; Carrera, Diego A; Celli, Anna; Cho, Juhyun; Briones, Jessica D; Duecker, Jason M; Goretsky, Yitzhar E; Dannenfelser, Ruth; Cardarelli, Lia; Troyanskaya, Olga; Sidhu, Sachdev S; Roybal, Kole T; Okada, Hideho; Lim, Wendell A | Science translational medicine | 33910979 | 2021 04 28 |
| Effect of antibiotic treatment on Oxalobacter formigenes colonization of the gut microbiome and urinary oxalate excretion. | Nazzal, Lama; Francois, Fritz; Henderson, Nora; Liu, Menghan; Li, Huilin; Koh, Hyunwook; Wang, Chan; Gao, Zhan; Perez, Guillermo Perez; Asplin, John R; Goldfarb, David S; Blaser, Martin J | Scientific reports | 34385560 | 2021 08 12 |
| Hyperglycemia minimally alters primary self-renewing human colonic epithelial cells while TNFα-promotes severe intestinal epithelial dysfunction. | Dutton, Johanna S; Hinman, Samuel S; Kim, Raehyun; Attayek, Peter J; Maurer, Mallory; Sims, Christopher S; Allbritton, Nancy L | Integrative biology : quantitative biosciences from nano to macro | 33989405 | 2021 06 15 |
| Magnetically-propelled fecal surrogates for modeling the impact of solid-induced shear forces on primary colonic epithelial cells. | Hinman, Samuel S; Huling, Jennifer; Wang, Yuli; Wang, Hao; Bretherton, Ross C; DeForest, Cole A; Allbritton, Nancy L | Biomaterials | 34412014 | 2021 09 |
| Enteric pathogens induce tissue tolerance and prevent neuronal loss from subsequent infections. | Ahrends, Tomasz; Aydin, Begüm; Matheis, Fanny; Classon, Cajsa H; Marchildon, François; Furtado, Gláucia C; Lira, Sérgio A; Mucida, Daniel | Cell | 34717799 | 2021 11 11 |
| Simple biochemical features underlie transcriptional activation domain diversity and dynamic, fuzzy binding to Mediator. | Sanborn, Adrian L; Yeh, Benjamin T; Feigerle, Jordan T; Hao, Cynthia V; Townshend, Raphael Jl; Lieberman Aiden, Erez; Dror, Ron O; Kornberg, Roger D | eLife | 33904398 | 2021 04 27 |
| Deciphering molecular interactions by proximity labeling. | Qin, Wei; Cho, Kelvin F; Cavanagh, Peter E; Ting, Alice Y | Nature methods | 33432242 | 2021 Feb |
| Relationship among egg quality traits in Japanese quails and prediction of egg weight and color using data mining algorithms. | Çelik, Şenol; Eyduran, Ecevit; Şengül, A Yusuf; Şengül, Turgay | Tropical animal health and production | 34195902 | 2021 Jul 01 |
| Roadmap on biology in time varying environments. | Murugan, Arvind; Husain, Kabir; Rust, Michael J; Hepler, Chelsea; Bass, Joseph; Pietsch, Julian M J; Swain, Peter S; Jena, Siddhartha G; Toettcher, Jared E; Chakraborty, Arup K; Sprenger, Kayla G; Mora, T; Walczak, A M; Rivoire, O; Wang, Shenshen; Wood, Kevin B; Skanata, Antun; Kussell, Edo; Ranganathan, Rama; Shih, Hong-Yan; Goldenfeld, Nigel | Physical biology | 33477124 | 2021 May 17 |
| Regulation of epithelial sodium channel activity by SARS-CoV-1 and SARS-CoV-2 proteins. | Grant, Stephen N; Lester, Henry A | Biophysical journal | 34197807 | 2021 07 20 |
| Microfluidic capillary networks are more sensitive than ektacytometry to the decline of red blood cell deformability induced by storage. | Piety, Nathaniel Z; Stutz, Julianne; Yilmaz, Nida; Xia, Hui; Yoshida, Tatsuro; Shevkoplyas, Sergey S | Scientific reports | 33436749 | 2021 01 12 |
| Potential Effects of Poloxamer 188 on Rat Isolated Brain Mitochondria after Oxidative Stress In Vivo and In Vitro. | Pille, Johannes A; Riess, Matthias L | Brain sciences | 33477541 | 2021 Jan 18 |
| A diagnostic host response biosignature for COVID-19 from RNA profiling of nasal swabs and blood. | Ng, Dianna L; Granados, Andrea C; Santos, Yale A; Servellita, Venice; Goldgof, Gregory M; Meydan, Cem; Sotomayor-Gonzalez, Alicia; Levine, Andrew G; Balcerek, Joanna; Han, Lucy M; Akagi, Naomi; Truong, Kent; Neumann, Neil M; Nguyen, David N; Bapat, Sagar P; Cheng, Jing; Martin, Claudia Sanchez-San; Federman, Scot; Foox, Jonathan; Gopez, Allan; Li, Tony; Chan, Ray; Chu, Cynthia S; Wabl, Chiara A; Gliwa, Amelia S; Reyes, Kevin; Pan, Chao-Yang; Guevara, Hugo; Wadford, Debra; Miller, Steve; Mason, Christopher E; Chiu, Charles Y | Science advances | 33536218 | 2021 02 |
| Systems biology analysis of human genomes points to key pathways conferring spina bifida risk. | Aguiar-Pulido, Vanessa; Wolujewicz, Paul; Martinez-Fundichely, Alexander; Elhaik, Eran; Thareja, Gaurav; Abdel Aleem, Alice; Chalhoub, Nader; Cuykendall, Tawny; Al-Zamer, Jamel; Lei, Yunping; El-Bashir, Haitham; Musser, James M; Al-Kaabi, Abdulla; Shaw, Gary M; Khurana, Ekta; Suhre, Karsten; Mason, Christopher E; Elemento, Olivier; Finnell, Richard H; Ross, M Elizabeth | Proceedings of the National Academy of Sciences of the United States of America | 34916285 | 2021 Dec 21 |
| Integrating multi-omics data by learning modality invariant representations for improved prediction of overall survival of cancer. | Tong, Li; Wu, Hang; Wang, May D | Methods (San Diego, Calif.) | 32763377 | 2021 05 |
| Deleting DNMT3A in CAR T cells prevents exhaustion and enhances antitumor activity. | Prinzing, Brooke; Zebley, Caitlin C; Petersen, Christopher T; Fan, Yiping; Anido, Alejandro Allo; Yi, Zhongzhen; Nguyen, Phuong; Houke, Haley; Bell, Matthew; Haydar, Dalia; Brown, Charmaine; Boi, Shannon K; Alli, Shanta; Crawford, Jeremy Chase; Riberdy, Janice M; Park, Jeoungeun J; Zhou, Sheng; Velasquez, Mireya Paulina; DeRenzo, Chris; Lazzarotto, Cicera R; Tsai, Shengdar Q; Vogel, Peter; Pruett-Miller, Shondra M; Langfitt, Deanna M; Gottschalk, Stephen; Youngblood, Ben; Krenciute, Giedre | Science translational medicine | 34788079 | 2021 Nov 17 |
| Performance Evaluation of the uEXPLORER Total-Body PET/CT Scanner Based on NEMA NU 2-2018 with Additional Tests to Characterize PET Scanners with a Long Axial Field of View. | Spencer, Benjamin A; Berg, Eric; Schmall, Jeffrey P; Omidvari, Negar; Leung, Edwin K; Abdelhafez, Yasser G; Tang, Songsong; Deng, Zilin; Dong, Yun; Lv, Yang; Bao, Jun; Liu, Weiping; Li, Hongdi; Jones, Terry; Badawi, Ramsey D; Cherry, Simon R | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 33008932 | 2021 Jun 01 |
| Analysis of Four-Dimensional Data for Total Body PET Imaging. | Viswanath, Varsha; Chitalia, Rhea; Pantel, Austin R; Karp, Joel S; Mankoff, David A | PET clinics | 33218604 | 2021 Jan |
| Quantitative PET in the 2020s: a roadmap. | Meikle, Steven R; Sossi, Vesna; Roncali, Emilie; Cherry, Simon R; Banati, Richard; Mankoff, David; Jones, Terry; James, Michelle; Sutcliffe, Julie; Ouyang, Jinsong; Petibon, Yoann; Ma, Chao; El Fakhri, Georges; Surti, Suleman; Karp, Joel S; Badawi, Ramsey D; Yamaya, Taiga; Akamatsu, Go; Schramm, Georg; Rezaei, Ahmadreza; Nuyts, Johan; Fulton, Roger; Kyme, André; Lois, Cristina; Sari, Hasan; Price, Julie; Boellaard, Ronald; Jeraj, Robert; Bailey, Dale L; Eslick, Enid; Willowson, Kathy P; Dutta, Joyita | Physics in medicine and biology | 33339012 | 2021 03 12 |
| Identification of Novel Therapeutic Targets for Fibrolamellar Carcinoma Using Patient-Derived Xenografts and Direct-from-Patient Screening. | Lalazar, Gadi; Requena, David; Ramos-Espiritu, Lavoisier; Ng, Denise; Bhola, Patrick D; de Jong, Ype P; Wang, Ruisi; Narayan, Nicole J C; Shebl, Bassem; Levin, Solomon; Michailidis, Eleftherios; Kabbani, Mohammad; Vercauteren, Koen O A; Hurley, Arlene M; Farber, Benjamin A; Hammond, William J; Saltsman 3rd, James A; Weinberg, Ethan M; Glickman, J Fraser; Lyons, Barbara A; Ellison, Jessica; Schadde, Erik; Hertl, Martin; Leiting, Jennifer L; Truty, Mark J; Smoot, Rory L; Tierney, Faith; Kato, Tomoaki; Wendel, Hans-Guido; LaQuaglia, Michael P; Rice, Charles M; Letai, Anthony; Coffino, Philip; Torbenson, Michael S; Ortiz, Michael V; Simon, Sanford M | Cancer discovery | 34127480 | 2021 10 |
| In vitro generation of self-renewing human intestinal epithelia over planar and shaped collagen hydrogels. | Hinman, Samuel S; Wang, Yuli; Kim, Raehyun; Allbritton, Nancy L | Nature protocols | 33299154 | 2021 01 |
| Stem/Proliferative and Differentiated Cells within Primary Murine Colonic Epithelium Display Distinct Intracellular Free Ca2+ Signal Codes. | Mestril, Sebastian; Kim, Raehyun; Hinman, Samuel S; Gomez, Shawn M; Allbritton, Nancy L | Advanced healthcare materials | 34510822 | 2021 11 |
| 3D genomics across the tree of life reveals condensin II as a determinant of architecture type. | Hoencamp, Claire; Dudchenko, Olga; Elbatsh, Ahmed M O; Brahmachari, Sumitabha; Raaijmakers, Jonne A; van Schaik, Tom; Sedeño Cacciatore, Ángela; Contessoto, Vinícius G; van Heesbeen, Roy G H P; van den Broek, Bram; Mhaskar, Aditya N; Teunissen, Hans; St Hilaire, Brian Glenn; Weisz, David; Omer, Arina D; Pham, Melanie; Colaric, Zane; Yang, Zhenzhen; Rao, Suhas S P; Mitra, Namita; Lui, Christopher; Yao, Weijie; Khan, Ruqayya; Moroz, Leonid L; Kohn, Andrea; St Leger, Judy; Mena, Alexandria; Holcroft, Karen; Gambetta, Maria Cristina; Lim, Fabian; Farley, Emma; Stein, Nils; Haddad, Alexander; Chauss, Daniel; Mutlu, Ayse Sena; Wang, Meng C; Young, Neil D; Hildebrandt, Evin; Cheng, Hans H; Knight, Christopher J; Burnham, Theresa L U; Hovel, Kevin A; Beel, Andrew J; Mattei, Pierre-Jean; Kornberg, Roger D; Warren, Wesley C; Cary, Gregory; Gómez-Skarmeta, José Luis; Hinman, Veronica; Lindblad-Toh, Kerstin; Di Palma, Federica; Maeshima, Kazuhiro; Multani, Asha S; Pathak, Sen; Nel-Themaat, Liesl; Behringer, Richard R; Kaur, Parwinder; Medema, René H; van Steensel, Bas; de Wit, Elzo; Onuchic, José N; Di Pierro, Michele; Lieberman Aiden, Erez; Rowland, Benjamin D | Science (New York, N.Y.) | 34045355 | 2021 05 28 |
| Gold nanoparticles and tilt pairs to assess protein flexibility by cryo-electron microscopy. | Jagota, Milind; Townshend, Raphael J L; Kang, Lin-Woo; Bushnell, David A; Dror, Ron O; Kornberg, Roger D; Azubel, Maia | Ultramicroscopy | 34062386 | 2021 08 |
| Targeting the coronavirus nucleocapsid protein through GSK-3 inhibition. | Liu, Xiaolei; Verma, Anurag; Garcia Jr, Gustavo; Ramage, Holly; Lucas, Anastasia; Myers, Rebecca L; Michaelson, Jacob J; Coryell, William; Kumar, Arvind; Charney, Alexander W; Kazanietz, Marcelo G; Rader, Daniel J; Ritchie, Marylyn D; Berrettini, Wade H; Schultz, David C; Cherry, Sara; Damoiseaux, Robert; Arumugaswami, Vaithilingaraja; Klein, Peter S | Proceedings of the National Academy of Sciences of the United States of America | 34593624 | 2021 10 19 |
| Dynamic PET-facilitated modeling and high-dose rifampin regimens for Staphylococcus aureus orthopedic implant-associated infections. | Gordon, Oren; Lee, Donald E; Liu, Bessie; Langevin, Brooke; Ordonez, Alvaro A; Dikeman, Dustin A; Shafiq, Babar; Thompson, John M; Sponseller, Paul D; Flavahan, Kelly; Lodge, Martin A; Rowe, Steven P; Dannals, Robert F; Ruiz-Bedoya, Camilo A; Read, Timothy D; Peloquin, Charles A; Archer, Nathan K; Miller, Lloyd S; Davis, Kimberly M; Gobburu, Jogarao V S; Jain, Sanjay K | Science translational medicine | 34851697 | 2021 Dec |
| Paradoxical whole genome DNA methylation dynamics of 5'aza-deoxycytidine in chronic low-dose exposure in mice. | Colwell, Mathia; Wanner, Nicole M; Drown, Chelsea; Drown, Melissa; Dolinoy, Dana C; Faulk, Christopher | Epigenetics | 32619143 | 2021 Jan-Feb |
| Replicate sequencing libraries are important for quantification of allelic imbalance. | Mendelevich, Asia; Vinogradova, Svetlana; Gupta, Saumya; Mironov, Andrey A; Sunyaev, Shamil R; Gimelbrant, Alexander A | Nature communications | 34099647 | 2021 06 07 |
| Molecular mechanism of prestin electromotive signal amplification. | Ge, Jingpeng; Elferich, Johannes; Dehghani-Ghahnaviyeh, Sepehr; Zhao, Zhiyu; Meadows, Marc; von Gersdorff, Henrique; Tajkhorshid, Emad; Gouaux, Eric | Cell | 34390643 | 2021 Sep 02 |
| Variability within rare cell states enables multiple paths toward drug resistance. | Emert, Benjamin L; Cote, Christopher J; Torre, Eduardo A; Dardani, Ian P; Jiang, Connie L; Jain, Naveen; Shaffer, Sydney M; Raj, Arjun | Nature biotechnology | 33619394 | 2021 07 |
| Split-TurboID enables contact-dependent proximity labeling in cells. | Cho, Kelvin F; Branon, Tess C; Rajeev, Sanjana; Svinkina, Tanya; Udeshi, Namrata D; Thoudam, Themis; Kwak, Chulhwan; Rhee, Hyun-Woo; Lee, In-Kyu; Carr, Steven A; Ting, Alice Y | Proceedings of the National Academy of Sciences of the United States of America | 32424107 | 2020 06 02 |
| Radiotracer Development for Bacterial Imaging. | Mota, Filipa; Ordonez, Alvaro A; Firth, George; Ruiz-Bedoya, Camilo A; Ma, Michelle T; Jain, Sanjay K | Journal of medicinal chemistry | 32048838 | 2020 03 12 |
| Cavitary tuberculosis: the gateway of disease transmission. | Urbanowski, Michael E; Ordonez, Alvaro A; Ruiz-Bedoya, Camilo A; Jain, Sanjay K; Bishai, William R | The Lancet. Infectious diseases | 32482293 | 2020 06 |
| Diurnal, metabolic and thermogenic alterations in a murine model of accelerated aging. | Allison, David B; Ren, Guang; Peliciari-Garcia, Rodrigo A; Mia, Sobuj; McGinnis, Graham R; Davis, Jennifer; Gamble, Karen L; Kim, Jeong-A; Young, Martin E | Chronobiology international | 32819176 | 2020 08 |
| Plant metabolism of nematode pheromones mediates plant-nematode interactions. | Manohar, Murli; Tenjo-Castano, Francisco; Chen, Shiyan; Zhang, Ying K; Kumari, Anshu; Williamson, Valerie M; Wang, Xiaohong; Klessig, Daniel F; Schroeder, Frank C | Nature communications | 31924834 | 2020 01 10 |
| Flexible Piezoelectric Nanogenerators Using Metal-doped ZnO-PVDF Films. | Jin, Congran; Hao, Nanjing; Xu, Zhe; Trase, Ian; Nie, Yuan; Dong, Lin; Closson, Andrew; Chen, Zi; Zhang, John X J | Sensors and actuators. A, Physical | 33380776 | 2020 Apr 15 |
| Genetically targeted chemical assembly of functional materials in living cells, tissues, and animals. | Liu, Jia; Kim, Yoon Seok; Richardson, Claire E; Tom, Ariane; Ramakrishnan, Charu; Birey, Fikri; Katsumata, Toru; Chen, Shucheng; Wang, Cheng; Wang, Xiao; Joubert, Lydia-Marie; Jiang, Yuanwen; Wang, Huiliang; Fenno, Lief E; Tok, Jeffrey B-H; Pașca, Sergiu P; Shen, Kang; Bao, Zhenan; Deisseroth, Karl | Science (New York, N.Y.) | 32193327 | 2020 03 20 |
| High-contrast, synchronous volumetric imaging with selective volume illumination microscopy. | Truong, Thai V; Holland, Daniel B; Madaan, Sara; Andreev, Andrey; Keomanee-Dizon, Kevin; Troll, Josh V; Koo, Daniel E S; McFall-Ngai, Margaret J; Fraser, Scott E | Communications biology | 32060411 | 2020 02 14 |
| Highly Parallel Profiling of Cas9 Variant Specificity. | Schmid-Burgk, Jonathan L; Gao, Linyi; Li, David; Gardner, Zachary; Strecker, Jonathan; Lash, Blake; Zhang, Feng | Molecular cell | 32187529 | 2020 05 21 |
| The Pseudomonas aeruginosa accessory genome elements influence virulence towards Caenorhabditis elegans. | Vasquez-Rifo, Alejandro; Veksler-Lublinsky, Isana; Cheng, Zhenyu; Ausubel, Frederick M; Ambros, Victor | Genome biology | 31823826 | 2019 12 10 |
| Latent variable modeling for the microbiome. | Sankaran, Kris; Holmes, Susan P | Biostatistics (Oxford, England) | 29868846 | 2019 10 01 |
| Precision health for breast cancer metastasis: biomaterial scaffolds as an engineered metastatic niche to define, study, and monitor metastatic progression. | Bushnell, Grace G; Wicha, Max S; Jeruss, Jacqueline S; Shea, Lonnie D | Oncoscience | 31984215 | 2019 Nov |
| First Human Imaging Studies with the EXPLORER Total-Body PET Scanner. | Badawi, Ramsey D; Shi, Hongcheng; Hu, Pengcheng; Chen, Shuguang; Xu, Tianyi; Price, Patricia M; Ding, Yu; Spencer, Benjamin A; Nardo, Lorenzo; Liu, Weiping; Bao, Jun; Jones, Terry; Li, Hongdi; Cherry, Simon R | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 30733314 | 2019 03 |
| Deconstructing Odorant Identity via Primacy in Dual Networks. | Kepple, Daniel R; Giaffar, Hamza; Rinberg, Dmitry; Koulakov, Alexei A | Neural computation | 30764743 | 2019 04 |
| The effects of trans-resveratrol on insulin resistance, inflammation, and microbiota in men with the metabolic syndrome: A pilot randomized, placebo-controlled clinical trial. | Walker, Jeanne M; Eckardt, Patricia; Aleman, Jose O; da Rosa, Joel Correa; Liang, Yupu; Iizumi, Tadasu; Etheve, Stephane; Blaser, Martin J; L Breslow, Jan; Holt, Peter R | Journal of clinical and translational research | 30873501 | 2019 Jan 10 |
| Longitudinal changes of microbiome composition and microbial metabolomics after surgical weight loss in individuals with obesity. | Shen, Nan; Caixàs, Assumpta; Ahlers, Michael; Patel, Kapila; Gao, Zhan; Dutia, Roxanne; Blaser, Martin J; Clemente, Jose C; Laferrère, Blandine | Surgery for obesity and related diseases : official journal of the American Society for Bariatric Surgery | 31296445 | 2019 Aug |
| Exploring new technologies in biomedical research. | Benam, Kambez H; Gilchrist, Siobhan; Kleensang, Andre; Satz, Ani B; Willett, Catherine; Zhang, Qiang | Drug discovery today | 30953865 | 2019 06 |
| Somatic expression of piRNA and associated machinery in the mouse identifies short, tissue-specific piRNA. | Perera, Bambarendage P U; Tsai, Zing Tsung-Yeh; Colwell, Mathia L; Jones, Tamara R; Goodrich, Jaclyn M; Wang, Kai; Sartor, Maureen A; Faulk, Christopher; Dolinoy, Dana C | Epigenetics | 30955436 | 2019 05 |
| Purification of cross-linked RNA-protein complexes by phenol-toluol extraction. | Urdaneta, Erika C; Vieira-Vieira, Carlos H; Hick, Timon; Wessels, Hans-Herrmann; Figini, Davide; Moschall, Rebecca; Medenbach, Jan; Ohler, Uwe; Granneman, Sander; Selbach, Matthias; Beckmann, Benedikt M | Nature communications | 30824702 | 2019 03 01 |
| Characterization of Lipid-Protein Interactions and Lipid-Mediated Modulation of Membrane Protein Function through Molecular Simulation. | Muller, Melanie P; Jiang, Tao; Sun, Chang; Lihan, Muyun; Pant, Shashank; Mahinthichaichan, Paween; Trifan, Anda; Tajkhorshid, Emad | Chemical reviews | 30978005 | 2019 May 08 |
| A network of phosphatidylinositol 4,5-bisphosphate binding sites regulates gating of the Ca2+-activated Cl- channel ANO1 (TMEM16A). | Yu, Kuai; Jiang, Tao; Cui, YuanYuan; Tajkhorshid, Emad; Hartzell, H Criss | Proceedings of the National Academy of Sciences of the United States of America | 31515451 | 2019 10 01 |
| Increased T Cell Differentiation and Cytolytic Function in Bangladeshi Compared to American Children. | Wagar, Lisa E; Bolen, Christopher R; Sigal, Natalia; Lopez Angel, Cesar J; Guan, Leying; Kirkpatrick, Beth D; Haque, Rashidul; Tibshirani, Robert J; Parsonnet, Julie; Petri Jr, William A; Davis, Mark M | Frontiers in immunology | 31620139 | 2019 |
| Development of a Synthetic 3-ketosteroid Δ1-dehydrogenase for the Generation of a Novel Catabolic Pathway Enabling Cholesterol Degradation in Human Cells. | D'Arcy, Brandon M; Swingle, Mark R; Schambeau, Lindsay; Pannell, Lewis; Prakash, Aishwarya; Honkanen, Richard E | Scientific reports | 30979909 | 2019 04 12 |
| Model-guided mechanism discovery and parameter selection for directed evolution. | Stainbrook, Sarah C; Tyo, Keith E J | Applied microbiology and biotechnology | 31686141 | 2019 Dec |
| Enteric hyperoxaluria: role of microbiota and antibiotics. | Liu, Menghan; Nazzal, Lama | Current opinion in nephrology and hypertension | 31145706 | 2019 07 |
| Spectral Tuning by a Single Nucleotide Controls the Fluorescence Properties of a Fluorogenic Aptamer. | Filonov, Grigory S; Song, Wenjiao; Jaffrey, Samie R | Biochemistry | 30838859 | 2019 03 26 |
| Continuous monitoring of interstitial tissue oxygen using subcutaneous oxygen microsensors: In vivo characterization in healthy volunteers. | Kanick, Stephen C; Schneider, Peter A; Klitzman, Bruce; Wisniewski, Natalie A; Rebrin, Kerstin | Microvascular research | 30742844 | 2019 07 |
| 124-Color Super-resolution Imaging by Engineering DNA-PAINT Blinking Kinetics. | Wade, Orsolya K; Woehrstein, Johannes B; Nickels, Philipp C; Strauss, Sebastian; Stehr, Florian; Stein, Johannes; Schueder, Florian; Strauss, Maximilian T; Ganji, Mahipal; Schnitzbauer, Joerg; Grabmayr, Heinrich; Yin, Peng; Schwille, Petra; Jungmann, Ralf | Nano letters | 30864449 | 2019 04 10 |
| Ten quick tips for effective dimensionality reduction. | Nguyen, Lan Huong; Holmes, Susan | PLoS computational biology | 31220072 | 2019 06 |
| Allosteric modulation of a human protein kinase with monobodies. | Zorba, Adelajda; Nguyen, Vy; Koide, Akiko; Hoemberger, Marc; Zheng, Yuejiao; Kutter, Steffen; Kim, Chansik; Koide, Shohei; Kern, Dorothee | Proceedings of the National Academy of Sciences of the United States of America | 31239342 | 2019 07 09 |
| Potential long-term treatment of hemophilia A by neonatal co-transplantation of cord blood-derived endothelial colony-forming cells and placental mesenchymal stromal cells. | Gao, Kewa; Kumar, Priyadarsini; Cortez-Toledo, Elizabeth; Hao, Dake; Reynaga, Lizette; Rose, Melanie; Wang, Chuwang; Farmer, Diana; Nolta, Jan; Zhou, Jianda; Zhou, Ping; Wang, Aijun | Stem cell research & therapy | 30670078 | 2019 01 22 |
| A Neurologic Examination for Anesthesiologists: Assessing Arousal Level during Induction, Maintenance, and Emergence. | Reshef, Edith R; Schiff, Nicholas D; Brown, Emery N | Anesthesiology | 30664547 | 2019 03 |
| Deciphering human ribonucleoprotein regulatory networks. | Mukherjee, Neelanjan; Wessels, Hans-Hermann; Lebedeva, Svetlana; Sajek, Marcin; Ghanbari, Mahsa; Garzia, Aitor; Munteanu, Alina; Yusuf, Dilmurat; Farazi, Thalia; Hoell, Jessica I; Akat, Kemal M; Akalin, Altuna; Tuschl, Thomas; Ohler, Uwe | Nucleic acids research | 30517751 | 2019 01 25 |
| Determining the pharmacokinetics of nicotinic drugs in the endoplasmic reticulum using biosensors. | Shivange, Amol V; Borden, Philip M; Muthusamy, Anand K; Nichols, Aaron L; Bera, Kallol; Bao, Huan; Bishara, Ishak; Jeon, Janice; Mulcahy, Matthew J; Cohen, Bruce; O'Riordan, Saidhbhe L; Kim, Charlene; Dougherty, Dennis A; Chapman, Edwin R; Marvin, Jonathan S; Looger, Loren L; Lester, Henry A | The Journal of general physiology | 30718376 | 2019 06 03 |
| Stress: An evolutionary mutagen. | Maggert, Keith A | Proceedings of the National Academy of Sciences of the United States of America | 31434787 | 2019 09 03 |
| Effects of Integrated Brain, Body, and Social (IBBS) intervention on ERP measures of attentional control in children with ADHD. | Smith, Stephanie D; Crowley, Michael J; Ferrey, Anne; Ramsey, Kathleen; Wexler, Bruce E; Leckman, James F; Sukhodolsky, Denis G | Psychiatry research | 31233935 | 2019 08 |
| Holographic Reconstruction of Axonal Pathways in the Human Brain. | Petersen, Mikkel V; Mlakar, Jeffrey; Haber, Suzanne N; Parent, Martin; Smith, Yoland; Strick, Peter L; Griswold, Mark A; McIntyre, Cameron C | Neuron | 31708306 | 2019 12 18 |
| Staged development of long-lived T-cell receptor αβ TH17 resident memory T-cell population to Candida albicans after skin infection. | Park, Chang Ook; Fu, Xiujun; Jiang, Xiaodong; Pan, Youdong; Teague, Jessica E; Collins, Nicholas; Tian, Tian; O'Malley, John T; Emerson, Ryan O; Kim, Ji Hye; Jung, Yookyung; Watanabe, Rei; Fuhlbrigge, Robert C; Carbone, Francis R; Gebhardt, Thomas; Clark, Rachael A; Lin, Charles P; Kupper, Thomas S | The Journal of allergy and clinical immunology | 29128674 | 2018 08 |
| The Imperative to Vaccinate. | Hedrick, Stephen M | The Journal of pediatrics | 30054163 | 2018 10 |
| Humanizing the mdx mouse model of DMD: the long and the short of it. | Yucel, Nora; Chang, Alex C; Day, John W; Rosenthal, Nadia; Blau, Helen M | NPJ Regenerative medicine | 29479480 | 2018 |
| Bioengineering strategies to accelerate stem cell therapeutics. | Madl, Christopher M; Heilshorn, Sarah C; Blau, Helen M | Nature | 29769665 | 2018 05 |
| Telomere shortening is a hallmark of genetic cardiomyopathies. | Chang, Alex C Y; Chang, Andrew C H; Kirillova, Anna; Sasagawa, Koki; Su, Willis; Weber, Gerhard; Lin, Jue; Termglinchan, Vittavat; Karakikes, Ioannis; Seeger, Timon; Dainis, Alexandra M; Hinson, John T; Seidman, Jonathan; Seidman, Christine E; Day, John W; Ashley, Euan; Wu, Joseph C; Blau, Helen M | Proceedings of the National Academy of Sciences of the United States of America | 30150400 | 2018 09 11 |
| Proximity labeling: spatially resolved proteomic mapping for neurobiology. | Han, Shuo; Li, Jiefu; Ting, Alice Y | Current opinion in neurobiology | 29125959 | 2018 06 |
| Total-Body PET: Maximizing Sensitivity to Create New Opportunities for Clinical Research and Patient Care. | Cherry, Simon R; Jones, Terry; Karp, Joel S; Qi, Jinyi; Moses, William W; Badawi, Ramsey D | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 28935835 | 2018 Jan |
| Aptamer Recognition of Multiplexed Small-Molecule-Functionalized Substrates. | Nakatsuka, Nako; Cao, Huan H; Deshayes, Stephanie; Melkonian, Arin L; Kasko, Andrea M; Weiss, Paul S; Andrews, Anne M | ACS applied materials & interfaces | 29851335 | 2018 Jul 18 |
| Large-Area, Ultrathin Metal-Oxide Semiconductor Nanoribbon Arrays Fabricated by Chemical Lift-Off Lithography. | Zhao, Chuanzhen; Xu, Xiaobin; Bae, Sang-Hoon; Yang, Qing; Liu, Wenfei; Belling, Jason N; Cheung, Kevin M; Rim, You Seung; Yang, Yang; Andrews, Anne M; Weiss, Paul S | Nano letters | 30060654 | 2018 09 12 |
| Co-Designing a Collaborative Chronic Care Network (C3N) for Inflammatory Bowel Disease: Development of Methods. | Seid, Michael; Dellal, George; Peterson, Laura E; Provost, Lloyd; Gloor, Peter A; Fore, David Livingstone; Margolis, Peter A | JMIR human factors | 29472173 | 2018 Feb 22 |
| Circulating microRNAs and treatment response in the Phase II SWOG S0925 study for patients with new metastatic hormone-sensitive prostate cancer. | Cheng, Heather H; Plets, Melissa; Li, Hongli; Higano, Celestia S; Tangen, Catherine M; Agarwal, Neeraj; Vogelzang, Nicholas J; Hussain, Maha; Thompson Jr, Ian M; Tewari, Muneesh; Yu, Evan Y | The Prostate | 29105802 | 2018 Feb |
| Peptide design by optimization on a data-parameterized protein interaction landscape. | Jenson, Justin M; Xue, Vincent; Stretz, Lindsey; Mandal, Tirtha; Reich, Lothar Luther; Keating, Amy E | Proceedings of the National Academy of Sciences of the United States of America | 30322927 | 2018 10 30 |
| State-space multitaper time-frequency analysis. | Kim, Seong-Eun; Behr, Michael K; Ba, Demba; Brown, Emery N | Proceedings of the National Academy of Sciences of the United States of America | 29255032 | 2018 Jan 02 |
| Using Anesthesia to Reveal the Elements of Consciousness. | Solt, Ken | Trends in cognitive sciences | 30104140 | 2018 11 |
| Multimodal General Anesthesia: Theory and Practice. | Brown, Emery N; Pavone, Kara J; Naranjo, Marusa | Anesthesia and analgesia | 30252709 | 2018 11 |
| A Multitaper Frequency-Domain Bootstrap Method. | Kim, Seong-Eun; Ba, Demba; Brown, Emery N | IEEE signal processing letters | 32002009 | 2018 Dec |
| The TIA1 RNA-Binding Protein Family Regulates EIF2AK2-Mediated Stress Response and Cell Cycle Progression. | Meyer, Cindy; Garzia, Aitor; Mazzola, Michael; Gerstberger, Stefanie; Molina, Henrik; Tuschl, Thomas | Molecular cell | 29429924 | 2018 Feb 15 |
| OligoMiner provides a rapid, flexible environment for the design of genome-scale oligonucleotide in situ hybridization probes. | Beliveau, Brian J; Kishi, Jocelyn Y; Nir, Guy; Sasaki, Hiroshi M; Saka, Sinem K; Nguyen, Son C; Wu, Chao-Ting; Yin, Peng | Proceedings of the National Academy of Sciences of the United States of America | 29463736 | 2018 Mar 06 |
| Development of novel metabolite-responsive transcription factors via transposon-mediated protein fusion. | Younger, Andrew K D; Su, Peter Y; Shepard, Andrea J; Udani, Shreya V; Cybulski, Thaddeus R; Tyo, Keith E J; Leonard, Joshua N | Protein engineering, design & selection : PEDS | 29385546 | 2018 Feb 01 |
| Prediction of response to drug therapy in psychiatric disorders. | Stern, Shani; Linker, Sara; Vadodaria, Krishna C; Marchetto, Maria C; Gage, Fred H | Open biology | 29794033 | 2018 05 |
| A novel environment-evoked transcriptional signature predicts reactivity in single dentate granule neurons. | Jaeger, Baptiste N; Linker, Sara B; Parylak, Sarah L; Barron, Jerika J; Gallina, Iryna S; Saavedra, Christian D; Fitzpatrick, Conor; Lim, Christina K; Schafer, Simon T; Lacar, Benjamin; Jessberger, Sebastian; Gage, Fred H | Nature communications | 30082781 | 2018 Aug 06 |
| Closed-loop feedback control for microfluidic systems through automated capacitive fluid height sensing. | Soenksen, L R; Kassis, T; Noh, M; Griffith, L G; Trumper, D L | Lab on a chip | 29437172 | 2018 03 13 |
| Responsiveness to perturbations is a hallmark of transcription factors that maintain cell identity in vitro. | Mellis, Ian A; Edelstein, Hailey I; Truitt, Rachel; Goyal, Yogesh; Beck, Lauren E; Symmons, Orsolya; Dunagin, Margaret C; Linares Saldana, Ricardo A; Shah, Parisha P; Pérez-Bermejo, Juan A; Padmanabhan, Arun; Yang, Wenli; Jain, Rajan; Raj, Arjun | Cell systems | 34352221 | 2021 09 22 |
| Three-dimensional genome organization via triplex-forming RNAs. | Farabella, Irene; Di Stefano, Marco; Soler-Vila, Paula; Marti-Marimon, Maria; Marti-Renom, Marc A | Nature structural & molecular biology | 34759378 | 2021 Nov |
| Efficient generation of dopaminergic induced neuronal cells with midbrain characteristics. | Ng, Yi Han; Chanda, Soham; Janas, Justyna A; Yang, Nan; Kokubu, Yuko; Südhof, Thomas C; Wernig, Marius | Stem cell reports | 34171286 | 2021 07 13 |
| Barcoded oligonucleotides ligated on RNA amplified for multiplexed and parallel in situ analyses. | Liu, Songlei; Punthambaker, Sukanya; Iyer, Eswar P R; Ferrante, Thomas; Goodwin, Daniel; Fürth, Daniel; Pawlowski, Andrew C; Jindal, Kunal; Tam, Jenny M; Mifflin, Lauren; Alon, Shahar; Sinha, Anubhav; Wassie, Asmamaw T; Chen, Fei; Cheng, Anne; Willocq, Valerie; Meyer, Katharina; Ling, King-Hwa; Camplisson, Conor K; Kohman, Richie E; Aach, John; Lee, Je Hyuk; Yankner, Bruce A; Boyden, Edward S; Church, George M | Nucleic acids research | 33693773 | 2021 06 04 |
| Haplotype diversity and sequence heterogeneity of human telomeres. | Grigorev, Kirill; Foox, Jonathan; Bezdan, Daniela; Butler, Daniel; Luxton, Jared J; Reed, Jake; McKenna, Miles J; Taylor, Lynn; George, Kerry A; Meydan, Cem; Bailey, Susan M; Mason, Christopher E | Genome research | 34162698 | 2021 Jun 23 |
| Origins, Biology, and Diseases of Tissue Macrophages. | Cox, Nehemiah; Pokrovskii, Maria; Vicario, Rocio; Geissmann, Frederic | Annual review of immunology | 33902313 | 2021 04 26 |
| Poloxamer 188 Exerts Direct Protective Effects on Mouse Brain Microvascular Endothelial Cells in an In Vitro Traumatic Brain Injury Model. | Lotze, Felicia P; Riess, Matthias L | Biomedicines | 34440247 | 2021 Aug 19 |
| Implantable Cardiac Kirigami-Inspired Lead-Based Energy Harvester Fabricated by Enhanced Piezoelectric Composite Film. | Xu, Zhe; Jin, Congran; Cabe, Andrew; Escobedo, Danny; Gruslova, Aleksandra; Jenney, Scott; Closson, Andrew B; Dong, Lin; Chen, Zi; Feldman, Marc D; Zhang, John X J | Advanced healthcare materials | 33434407 | 2021 04 |
| Method for Inkjet-printing PEDOT:PSS polymer electrode arrays on piezoelectric PVDF-TrFE fibers. | Closson, Andrew; Richards, Haley; Xu, Zhe; Jin, Congran; Dong, Lin; Zhang, John X J | IEEE sensors journal | 34899077 | 2021 Dec |
| BMI as a Risk Factor for Clinical Outcomes in Patients Hospitalized with COVID-19 in New York. | Kim, Tara S; Roslin, Mitchell; Wang, Jason J; Kane, Jamie; Hirsch, Jamie S; Kim, Eun Ji; Northwell Health COVID-19 Research Consortium | Obesity (Silver Spring, Md.) | 33128848 | 2021 02 |
| Estimating the predictive value of negative severe acute respiratory coronavirus virus 2 (SARS-CoV-2) results: A prospective study. | Hirschwerk, David; Foley, Mathew; Lesser, Martin; Farber, Bruce; Crawford, James M; Davidson, Karina W; Berry, Gregory J; Smith, Elizabeth; Kast, Charles; Volel, Vladimir; McGinn, Thomas | Infection control and hospital epidemiology | 33298203 | 2021 10 |
| Prevalence and Predictors of Venous Thromboembolism or Mortality in Hospitalized COVID-19 Patients. | Cohen, Stuart L; Gianos, Eugenia; Barish, Mathew A; Chatterjee, Saurav; Kohn, Nina; Lesser, Martin; Giannis, Dimitrios; Coppa, Kevin; Hirsch, Jamie S; McGinn, Thomas G; Goldin, Mark E; Spyropoulos, Alex C; Northwell Health COVID-19 Research Consortium | Thrombosis and haemostasis | 33472255 | 2021 08 |
| Risk factors and outcomes for acute-on-chronic liver failure in COVID-19: a large multi-center observational cohort study. | Satapathy, Sanjaya K; Roth, Nitzan C; Kvasnovsky, Charlotte; Hirsch, Jamie S; Trindade, Arvind J; Molmenti, Ernesto; Barish, Matthew; Hirschwerk, David; Da, Ben L; Bernstein, David; Northwell Health COVID-19 Research Consortium | Hepatology international | 33826042 | 2021 Jun |
| Identification of long-lived proteins in the mitochondria reveals increased stability of the electron transport chain. | Krishna, Shefali; Arrojo E Drigo, Rafael; Capitanio, Juliana S; Ramachandra, Ranjan; Ellisman, Mark; Hetzer, Martin W | Developmental cell | 34715012 | 2021 11 08 |
| Divalent Cation Dependence Enhances Dopamine Aptamer Biosensing. | Nakatsuka, Nako; Abendroth, John M; Yang, Kyung-Ae; Andrews, Anne M | ACS applied materials & interfaces | 33410656 | 2021 Mar 03 |
| Normal childhood brain growth and a universal sex and anthropomorphic relationship to cerebrospinal fluid. | Peterson, Mallory R; Cherukuri, Venkateswararao; Paulson, Joseph N; Ssentongo, Paddy; Kulkarni, Abhaya V; Warf, Benjamin C; Monga, Vishal; Schiff, Steven J | Journal of neurosurgery. Pediatrics | 34243147 | 2021 Jul 09 |
| Congenital Cytomegalovirus Infection Burden and Epidemiologic Risk Factors in Countries With Universal Screening: A Systematic Review and Meta-analysis. | Ssentongo, Paddy; Hehnly, Christine; Birungi, Patricia; Roach, Mikayla A; Spady, Jada; Fronterre, Claudio; Wang, Ming; Murray-Kolb, Laura E; Al-Shaar, Laila; Chinchilli, Vernon M; Broach, James R; Ericson, Jessica E; Schiff, Steven J | JAMA network open | 34424308 | 2021 08 02 |
| Vaginal microbiome topic modeling of laboring Ugandan women with and without fever. | Movassagh, Mercedeh; Bebell, Lisa M; Burgoine, Kathy; Hehnly, Christine; Zhang, Lijun; Moran, Kim; Sheldon, Kathryn; Sinnar, Shamim A; Mbabazi-Kabachelor, Edith; Kumbakumba, Elias; Bazira, Joel; Ochora, Moses; Mulondo, Ronnie; Nsubuga, Brian Kaaya; Weeks, Andrew D; Gladstone, Melissa; Olupot-Olupot, Peter; Ngonzi, Joseph; Roberts, Drucilla J; Meier, Frederick A; Irizarry, Rafael A; Broach, James R; Schiff, Steven J; Paulson, Joseph N | NPJ biofilms and microbiomes | 34508087 | 2021 09 10 |
| An integrated program of computer-presented and physical cognitive training exercises for children with attention-deficit/hyperactivity disorder. | Wexler, Bruce E; Vitulano, Lawrence A; Moore, Christina; Katsovich, Liliya; Smith, Stephanie D; Rush, Cindy; Grantz, Heidi; Dong, Jinxia; Leckman, James F | Psychological medicine | 32090720 | 2021 07 |
| Evolution of natural lifespan variation and molecular strategies of extended lifespan in yeast. | Kaya, Alaattin; Phua, Cheryl Zi Jin; Lee, Mitchell; Wang, Lu; Tyshkovskiy, Alexander; Ma, Siming; Barre, Benjamin; Liu, Weiqiang; Harrison, Benjamin R; Zhao, Xiaqing; Zhou, Xuming; Wasko, Brian M; Bammler, Theo K; Promislow, Daniel El; Kaeberlein, Matt; Gladyshev, Vadim N | eLife | 34751131 | 2021 11 09 |
| Plasmodium falciparum LipB mutants display altered redox and carbon metabolism in asexual stages and cannot complete sporogony in Anopheles mosquitoes. | Biddau, Marco; Santha Kumar, T R; Henrich, Philipp; Laine, Larissa M; Blackburn, Gavin J; Chokkathukalam, Achuthanunni; Li, Tao; Lee Sim, Kim; King, Lewis; Hoffman, Stephen L; Barrett, Michael P; Coombs, Graham H; McFadden, Geoffrey I; Fidock, David A; Müller, Sylke; Sheiner, Lilach | International journal for parasitology | 33713652 | 2021 05 |
| Myeloperoxidase Inhibition Ameliorates Plaque Psoriasis in Mice. | Neu, Savannah D; Strzepa, Anna; Martin, Dustin; Sorci-Thomas, Mary G; Pritchard Jr, Kirkwood A; Dittel, Bonnie N | Antioxidants (Basel, Switzerland) | 34572970 | 2021 Aug 25 |
| Transient non-integrative expression of nuclear reprogramming factors promotes multifaceted amelioration of aging in human cells. | Sarkar, Tapash Jay; Quarta, Marco; Mukherjee, Shravani; Colville, Alex; Paine, Patrick; Doan, Linda; Tran, Christopher M; Chu, Constance R; Horvath, Steve; Qi, Lei S; Bhutani, Nidhi; Rando, Thomas A; Sebastiano, Vittorio | Nature communications | 32210226 | 2020 Mar 24 |
| The Problem of Microbial Dark Matter in Neonatal Sepsis. | Sinnar, Shamim A; Schiff, Steven J | Emerging infectious diseases | 33080169 | 2020 Nov |
| Old and new models for the study of human ageing. | Brunet, Anne | Nature reviews. Molecular cell biology | 32572179 | 2020 09 |
| Tracking microbial evolution in the human gut using Hi-C reveals extensive horizontal gene transfer, persistence and adaptation. | Yaffe, Eitan; Relman, David A | Nature microbiology | 31873203 | 2020 Feb |
| BRAFV 600E or mutant MAP2K1 human CD34+ cells establish Langerhans cell-like histiocytosis in immune-deficient mice. | Rafiei, Anahita; Wilk, C Matthias; Helbling, Patrick M; Myburgh, Renier; Saito, Yasuyuki; Haralambieva, Eugenia; Soldini, Davide; Chakraborty, Rikhia; Merad, Miriam; Allen, Carl E; Nombela-Arrieta, Cesar; Manz, Markus G | Blood advances | 33035332 | 2020 10 13 |
| Precision Calcium Imaging of Dense Neural Populations via a Cell-Body-Targeted Calcium Indicator. | Shemesh, Or A; Linghu, Changyang; Piatkevich, Kiryl D; Goodwin, Daniel; Celiker, Orhan Tunc; Gritton, Howard J; Romano, Michael F; Gao, Ruixuan; Yu, Chih-Chieh Jay; Tseng, Hua-An; Bensussen, Seth; Narayan, Sujatha; Yang, Chao-Tsung; Freifeld, Limor; Siciliano, Cody A; Gupta, Ishan; Wang, Joyce; Pak, Nikita; Yoon, Young-Gyu; Ullmann, Jeremy F P; Guner-Ataman, Burcu; Noamany, Habiba; Sheinkopf, Zoe R; Park, Won Min; Asano, Shoh; Keating, Amy E; Trimmer, James S; Reimer, Jacob; Tolias, Andreas S; Bear, Mark F; Tye, Kay M; Han, Xue; Ahrens, Misha B; Boyden, Edward S | Neuron | 32592656 | 2020 08 05 |
| Scalable Fabrication of Quasi-One-Dimensional Gold Nanoribbons for Plasmonic Sensing. | Zhao, Chuanzhen; Xu, Xiaobin; Ferhan, Abdul Rahim; Chiang, Naihao; Jackman, Joshua A; Yang, Qing; Liu, Wenfei; Andrews, Anne M; Cho, Nam-Joon; Weiss, Paul S | Nano letters | 32027140 | 2020 03 11 |
| Chemical Lift-Off Lithography of Metal and Semiconductor Surfaces. | Cheung, Kevin M; Stemer, Dominik M; Zhao, Chuanzhen; Young, Thomas D; Belling, Jason N; Andrews, Anne M; Weiss, Paul S | ACS materials letters | 32405626 | 2020 Jan 06 |
| Photothermal Intracellular Delivery Using Gold Nanodisk Arrays. | Zhao, Chuanzhen; Man, Tianxing; Xu, Xiaobin; Yang, Qing; Liu, Wenfei; Jonas, Steven J; Teitell, Michael A; Chiou, Pei-Yu; Weiss, Paul S | ACS materials letters | 34708213 | 2020 Nov 02 |
| Multifocal photoacoustic microscopy using a single-element ultrasonic transducer through an ergodic relay. | Li, Yang; Wong, Terence T W; Shi, Junhui; Hsu, Hsun-Chia; Wang, Lihong V | Light, science & applications | 33828070 | 2020 Jul 31 |
| Single-shot time-reversed optical focusing into and through scattering media. | Cheng, Zhongtao; Yang, Jiamiao; Wang, Lihong V | ACS photonics | 34337103 | 2020 Oct 21 |
| Author Correction: Efficient proximity labeling in living cells and organisms with TurboID. | Branon, Tess C; Bosch, Justin A; Sanchez, Ariana D; Udeshi, Namrata D; Svinkina, Tanya; Carr, Steven A; Feldman, Jessica L; Perrimon, Norbert; Ting, Alice Y | Nature biotechnology | 31748691 | 2020 Jan |
| Cost effective, experimentally robust differential-expression analysis for human/mammalian, pathogen and dual-species transcriptomics. | Shetty, Amol C; Mattick, John; Chung, Matthew; McCracken, Carrie; Mahurkar, Anup; Filler, Scott G; Fraser, Claire M; Rasko, David A; Bruno, Vincent M; Dunning Hotopp, Julie C | Microbial genomics | 31851607 | 2020 01 |
| Best Practices for Successfully Writing and Publishing a Genome Announcement in Microbiology Resource Announcements. | Dunning Hotopp, Julie C; Baltrus, David A; Bruno, Vincent M; Dennehy, John J; Gill, Steven R; Maresca, Julia A; Matthijnssens, Jelle; Newton, Irene L G; Putonti, Catherine; Rasko, David A; Rokas, Antonis; Roux, Simon; Stajich, Jason E; Stedman, Kenneth M; Stewart, Frank J; Thrash, J Cameron | Microbiology resource announcements | 32883786 | 2020 Sep 03 |
| Expansion, in vivo-ex vivo cycling, and genetic manipulation of primary human hepatocytes. | Michailidis, Eleftherios; Vercauteren, Koen; Mancio-Silva, Liliana; Andrus, Linda; Jahan, Cyprien; Ricardo-Lax, Inna; Zou, Chenhui; Kabbani, Mohammad; Park, Paul; Quirk, Corrine; Pyrgaki, Christina; Razooky, Brandon; Verhoye, Lieven; Zoluthkin, Irene; Lu, Wei-Yu; Forbes, Stuart J; Chiriboga, Luis; Theise, Neil D; Herzog, Roland W; Suemizu, Hiroshi; Schneider, William M; Shlomai, Amir; Meuleman, Philip; Bhatia, Sangeeta N; Rice, Charles M; de Jong, Ype P | Proceedings of the National Academy of Sciences of the United States of America | 31915293 | 2020 01 21 |
| A Combination of Human Broadly Neutralizing Antibodies against Hepatitis B Virus HBsAg with Distinct Epitopes Suppresses Escape Mutations. | Wang, Qiao; Michailidis, Eleftherios; Yu, Yingpu; Wang, Zijun; Hurley, Arlene M; Oren, Deena A; Mayer, Christian T; Gazumyan, Anna; Liu, Zhenmi; Zhou, Yunjiao; Schoofs, Till; Yao, Kai-Hui; Nieke, Jan P; Wu, Jianbo; Jiang, Qingling; Zou, Chenhui; Kabbani, Mohanmmad; Quirk, Corrine; Oliveira, Thiago; Chhosphel, Kalsang; Zhang, Qianqian; Schneider, William M; Jahan, Cyprien; Ying, Tianlei; Horowitz, Jill; Caskey, Marina; Jankovic, Mila; Robbiani, Davide F; Wen, Yumei; de Jong, Ype P; Rice, Charles M; Nussenzweig, Michel C | Cell host & microbe | 32504577 | 2020 08 12 |
| Fattening chips: hypertrophy, feeding, and fasting of human white adipocytes in vitro. | Pope, Benjamin D; Warren, Curtis R; Dahl, Madeleine O; Pizza, Christina V; Henze, Douglas E; Sinatra, Nina R; Gonzalez, Grant M; Chang, Huibin; Liu, Qihan; Glieberman, Aaron L; Ferrier Jr, John P; Cowan, Chad A; Parker, Kevin Kit | Lab on a chip | 33034335 | 2020 11 10 |
| Work-related adverse respiratory health outcomes at a machine manufacturing facility with a cluster of bronchiolitis, alveolar ductitis and emphysema (BADE). | Cummings, Kristin J; Stanton, Marcia L; Kreiss, Kathleen; Boylstein, Randy J; Park, Ju-Hyeong; Cox-Ganser, Jean M; Virji, M Abbas; Edwards, Nicole T; Segal, Leopoldo N; Blaser, Martin J; Weissman, David N; Nett, Randall J | Occupational and environmental medicine | 32132182 | 2020 06 |
| Adrenergic Signaling in Muscularis Macrophages Limits Infection-Induced Neuronal Loss. | Matheis, Fanny; Muller, Paul A; Graves, Christina L; Gabanyi, Ilana; Kerner, Zachary J; Costa-Borges, Diego; Ahrends, Tomasz; Rosenstiel, Philip; Mucida, Daniel | Cell | 31923400 | 2020 01 09 |
| Proximity labeling in mammalian cells with TurboID and split-TurboID. | Cho, Kelvin F; Branon, Tess C; Udeshi, Namrata D; Myers, Samuel A; Carr, Steven A; Ting, Alice Y | Nature protocols | 33139955 | 2020 Dec |
| Dynamic imaging in patients with tuberculosis reveals heterogeneous drug exposures in pulmonary lesions. | Ordonez, Alvaro A; Wang, Hechuan; Magombedze, Gesham; Ruiz-Bedoya, Camilo A; Srivastava, Shashikant; Chen, Allen; Tucker, Elizabeth W; Urbanowski, Michael E; Pieterse, Lisa; Fabian Cardozo, E; Lodge, Martin A; Shah, Maunank R; Holt, Daniel P; Mathews, William B; Dannals, Robert F; Gobburu, Jogarao V S; Peloquin, Charles A; Rowe, Steven P; Gumbo, Tawanda; Ivaturi, Vijay D; Jain, Sanjay K | Nature medicine | 32066976 | 2020 04 |
| Flagging Bacteria with Radiolabeled d-Amino Acids. | Mota, Filipa; Jain, Sanjay K | ACS central science | 32123728 | 2020 Feb 26 |
| The role of environmental exposures and the epigenome in health and disease. | Perera, Bambarendage P U; Faulk, Christopher; Svoboda, Laurie K; Goodrich, Jaclyn M; Dolinoy, Dana C | Environmental and molecular mutagenesis | 31177562 | 2020 01 |
| Mechanistic Studies of the Multiple Myeloma and Melanoma Cell-Selective Toxicity of the Rpn13-Binding Peptoid KDT-11. | Dickson, Paige; Simanski, Scott; Ngundu, John Maina; Kodadek, Thomas | Cell chemical biology | 32857986 | 2020 11 19 |
| An inducible CRISPR interference library for genetic interrogation of Saccharomyces cerevisiae biology. | Momen-Roknabadi, Amir; Oikonomou, Panos; Zegans, Maxwell; Tavazoie, Saeed | Communications biology | 33247197 | 2020 11 27 |
| Solid-phase synthesis of DNA-encoded libraries via an "aldehyde explosion" strategy. | Paciaroni, Nicholas G; Ndungu, John M; Kodadek, Thomas | Chemical communications (Cambridge, England) | 32215395 | 2020 Apr 30 |
| Gene Networks with Transcriptional Bursting Recapitulate Rare Transient Coordinated High Expression States in Cancer. | Schuh, Lea; Saint-Antoine, Michael; Sanford, Eric M; Emert, Benjamin L; Singh, Abhyudai; Marr, Carsten; Raj, Arjun; Goyal, Yogesh | Cell systems | 32325034 | 2020 04 22 |
| Memory Sequencing Reveals Heritable Single-Cell Gene Expression Programs Associated with Distinct Cellular Behaviors. | Shaffer, Sydney M; Emert, Benjamin L; Reyes Hueros, Raúl A; Cote, Christopher; Harmange, Guillaume; Schaff, Dylan L; Sizemore, Ann E; Gupte, Rohit; Torre, Eduardo; Singh, Abhyudai; Bassett, Danielle S; Raj, Arjun | Cell | 32735851 | 2020 08 20 |
| Presenting Characteristics, Comorbidities, and Outcomes Among 5700 Patients Hospitalized With COVID-19 in the New York City Area. | Richardson, Safiya; Hirsch, Jamie S; Narasimhan, Mangala; Crawford, James M; McGinn, Thomas; Davidson, Karina W; the Northwell COVID-19 Research Consortium; Barnaby, Douglas P; Becker, Lance B; Chelico, John D; Cohen, Stuart L; Cookingham, Jennifer; Coppa, Kevin; Diefenbach, Michael A; Dominello, Andrew J; Duer-Hefele, Joan; Falzon, Louise; Gitlin, Jordan; Hajizadeh, Negin; Harvin, Tiffany G; Hirschwerk, David A; Kim, Eun Ji; Kozel, Zachary M; Marrast, Lyndonna M; Mogavero, Jazmin N; Osorio, Gabrielle A; Qiu, Michael; Zanos, Theodoros P | JAMA | 32320003 | 2020 05 26 |
| Characteristics, Cardiac Involvement, and Outcomes of Multisystem Inflammatory Syndrome of Childhood Associated with severe acute respiratory syndrome coronavirus 2 Infection. | Capone, Christine A; Subramony, Anupama; Sweberg, Todd; Schneider, James; Shah, Sareen; Rubin, Lorry; Schleien, Charles; Northwell Health COVID-19 Research Consortium; Epstein, Shilpi; Johnson, Jennifer C; Kessel, Aaron; Misra, Nila; Mitchell, Elizabeth; Palumbo, Nancy; Rajan, Sujatha; Rocker, Josh; Williamson, Kristy; Davidson, Karina W | The Journal of pediatrics | 32553873 | 2020 09 |
| Clinical Mortality in a Large COVID-19 Cohort: Observational Study. | Jarrett, Mark; Schultz, Susanne; Lyall, Julie; Wang, Jason; Stier, Lori; De Geronimo, Marcella; Nelson, Karen | Journal of medical Internet research | 32930099 | 2020 09 25 |
| Out-of-focus brain image detection in serial tissue sections. | Pollatou, Angeliki; Ferrante, Daniel D | Journal of neuroscience methods | 32771371 | 2020 11 01 |
| Nuclear Periphery Takes Center Stage: The Role of Nuclear Pore Complexes in Cell Identity and Aging. | Cho, Ukrae H; Hetzer, Martin W | Neuron | 32553207 | 2020 06 17 |
| Expanding the AtLAS of non-coding RNA functions in the brain. | Regier, Matthew J; Shepherd, Jason D | Cell research | 32111970 | 2020 04 |
| Fibroblasts: The arbiters of extracellular matrix remodeling. | DeLeon-Pennell, Kristine Y; Barker, Thomas H; Lindsey, Merry L | Matrix biology : journal of the International Society for Matrix Biology | 32504772 | 2020 09 |
| Microfluidic enrichment of bacteria coupled to contact-free lysis on a magnetic polymer surface for downstream molecular detection. | Burklund, Alison; Petryk, James D; Hoopes, P Jack; Zhang, John X J | Biomicrofluidics | 32642021 | 2020 May |
| Scalable Signature-Based Molecular Diagnostics Through On-chip Biomarker Profiling Coupled with Machine Learning. | Molinski, John; Tadimety, Amogha; Burklund, Alison; Zhang, John X J | Annals of biomedical engineering | 32816167 | 2020 Oct |
| Genomic determinants of pathogenicity in SARS-CoV-2 and other human coronaviruses. | Gussow, Ayal B; Auslander, Noam; Faure, Guilhem; Wolf, Yuri I; Zhang, Feng; Koonin, Eugene V | Proceedings of the National Academy of Sciences of the United States of America | 32522874 | 2020 06 30 |
| m6A-binding YTHDF proteins promote stress granule formation. | Fu, Ye; Zhuang, Xiaowei | Nature chemical biology | 32451507 | 2020 Sep |
| Feature-rich covalent stains for super-resolution and cleared tissue fluorescence microscopy. | Mao, Chenyi; Lee, Min Yen; Jhan, Jing-Ru; Halpern, Aaron R; Woodworth, Marcus A; Glaser, Adam K; Chozinski, Tyler J; Shin, Leonard; Pippin, Jeffrey W; Shankland, Stuart J; Liu, Jonathan T C; Vaughan, Joshua C | Science advances | 32518827 | 2020 05 |
| Mosaic Somatic Gene Recombination as a Potentially Unifying Hypothesis for Alzheimer's Disease. | Kaeser, Gwendolyn E; Chun, Jerold | Frontiers in genetics | 32457796 | 2020 |
| Reply to: APP gene copy number changes reflect exogenous contamination. | Lee, Ming-Hsiang; Liu, Christine S; Zhu, Yunjiao; Kaeser, Gwendolyn E; Rivera, Richard; Romanow, William J; Kihara, Yasuyuki; Chun, Jerold | Nature | 32814882 | 2020 08 |
| Exome sequencing implicates genetic disruption of prenatal neuro-gliogenesis in sporadic congenital hydrocephalus. | Jin, Sheng Chih; Dong, Weilai; Kundishora, Adam J; Panchagnula, Shreyas; Moreno-De-Luca, Andres; Furey, Charuta G; Allocco, August A; Walker, Rebecca L; Nelson-Williams, Carol; Smith, Hannah; Dunbar, Ashley; Conine, Sierra; Lu, Qiongshi; Zeng, Xue; Sierant, Michael C; Knight, James R; Sullivan, William; Duy, Phan Q; DeSpenza, Tyrone; Reeves, Benjamin C; Karimy, Jason K; Marlier, Arnaud; Castaldi, Christopher; Tikhonova, Irina R; Li, Boyang; Peña, Helena Perez; Broach, James R; Kabachelor, Edith M; Ssenyonga, Peter; Hehnly, Christine; Ge, Li; Keren, Boris; Timberlake, Andrew T; Goto, June; Mangano, Francesco T; Johnston, James M; Butler, William E; Warf, Benjamin C; Smith, Edward R; Schiff, Steven J; Limbrick Jr, David D; Heuer, Gregory; Jackson, Eric M; Iskandar, Bermans J; Mane, Shrikant; Haider, Shozeb; Guclu, Bulent; Bayri, Yasar; Sahin, Yener; Duncan, Charles C; Apuzzo, Michael L J; DiLuna, Michael L; Hoffman, Ellen J; Sestan, Nenad; Ment, Laura R; Alper, Seth L; Bilguvar, Kaya; Geschwind, Daniel H; Günel, Murat; Lifton, Richard P; Kahle, Kristopher T | Nature medicine | 33077954 | 2020 Nov |
| Planar Laser Activated Neuronal Scanning (PLANS) System for in vivo Flow Cytometry. | Watson, Nicholas; Mondal, Sudip; DuPlissis, Andrew; Kim, Ki Hyun; Ben-Yakar, Adela | Frontiers in optics. Annual Meeting of the Optical Society of America | 35350105 | 2020 Sep |
| Precise T cell recognition programs designed by transcriptionally linking multiple receptors. | Williams, Jasper Z; Allen, Greg M; Shah, Devan; Sterin, Igal S; Kim, Ki H; Garcia, Vivian P; Shavey, Gavin E; Yu, Wei; Puig-Saus, Cristina; Tsoi, Jennifer; Ribas, Antoni; Roybal, Kole T; Lim, Wendell A | Science (New York, N.Y.) | 33243890 | 2020 11 27 |
| PennPET Explorer: Human Imaging on a Whole-Body Imager. | Pantel, Austin R; Viswanath, Varsha; Daube-Witherspoon, Margaret E; Dubroff, Jacob G; Muehllehner, Gerd; Parma, Michael J; Pryma, Daniel A; Schubert, Erin K; Mankoff, David A; Karp, Joel S | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 31562224 | 2020 01 |
| Numerical observer study of lesion detectability for a long axial field-of-view whole-body PET imager using the PennPET Explorer. | Viswanath, Varsha; Daube Witherspoon, Margaret E; Karp, Joel S; Surti, Suleman | Physics in medicine and biology | 31816616 | 2020 01 24 |
| Practical joint reconstruction of activity and attenuation with autonomous scaling for time-of-flight PET. | Li, Yusheng; Matej, Samuel; Karp, Joel S | Physics in medicine and biology | 32340014 | 2020 12 23 |
| Total Body PET: Why, How, What for? | Surti, Suleman; Pantel, Austin R; Karp, Joel S | IEEE transactions on radiation and plasma medical sciences | 33134653 | 2020 May |
| Arsenite and cadmium promote the development of mammary tumors. | Divekar, Shailaja D; Li, Heng-Hong; Parodi, Daniela A; Ghafouri, Tiffany Bita; Chen, Renxiang; Cyrus, Kedra; Foxworth, Aaron E; Fornace, Albert J; Byrne, Celia; Martin, Mary Beth | Carcinogenesis | 31646340 | 2020 07 14 |
| An easy-to-assemble, robust, and lightweight drive implant for chronic tetrode recordings in freely moving animals. | Voigts, Jakob; Newman, Jonathan P; Wilson, Matthew A; Harnett, Mark T | Journal of neural engineering | 32074511 | 2020 05 19 |
| Ligand-Guided Selection with Artificially Expanded Genetic Information Systems against TCR-CD3ε. | Zumrut, Hasan; Yang, Zunyi; Williams, Nicole; Arizala, Joekeem; Batool, Sana; Benner, Steven A; Mallikaratchy, Prabodhika | Biochemistry | 31880917 | 2020 02 04 |
| Physical and Functional Analysis of the Putative Rpn13 Inhibitor RA190. | Dickson, Paige; Abegg, Daniel; Vinogradova, Ekaterina; Takaya, Junichiro; An, Hongchan; Simanski, Scott; Cravatt, Benjamin F; Adibekian, Alexander; Kodadek, Thomas | Cell chemical biology | 32857985 | 2020 11 19 |
| Probing cholesterol binding and translocation in P-glycoprotein. | Thangapandian, Sundar; Kapoor, Karan; Tajkhorshid, Emad | Biochimica et biophysica acta. Biomembranes | 31676371 | 2020 01 01 |
| An Activity-Based Sensing Approach for the Detection of Cyclooxygenase-2 in Live Cells. | Yadav, Anuj K; Reinhardt, Christopher J; Arango, Andres S; Huff, Hannah C; Dong, Liang; Malkowski, Michael G; Das, Aditi; Tajkhorshid, Emad; Chan, Jefferson | Angewandte Chemie (International ed. in English) | 31854058 | 2020 02 17 |
| Cryo-EM structures of a lipid-sensitive pentameric ligand-gated ion channel embedded in a phosphatidylcholine-only bilayer. | Kumar, Pramod; Wang, Yuhang; Zhang, Zhening; Zhao, Zhiyu; Cymes, Gisela D; Tajkhorshid, Emad; Grosman, Claudio | Proceedings of the National Academy of Sciences of the United States of America | 31911476 | 2020 Jan 21 |
| Aberrant Expression of a Non-muscle RBFOX2 Isoform Triggers Cardiac Conduction Defects in Myotonic Dystrophy. | Misra, Chaitali; Bangru, Sushant; Lin, Feikai; Lam, Kin; Koenig, Sara N; Lubbers, Ellen R; Hedhli, Jamila; Murphy, Nathaniel P; Parker, Darren J; Dobrucki, Lawrence W; Cooper, Thomas A; Tajkhorshid, Emad; Mohler, Peter J; Kalsotra, Auinash | Developmental cell | 32109384 | 2020 03 23 |
| Identifying mutation hotspots reveals pathogenetic mechanisms of KCNQ2 epileptic encephalopathy. | Zhang, Jiaren; Kim, Eung Chang; Chen, Congcong; Procko, Erik; Pant, Shashank; Lam, Kin; Patel, Jaimin; Choi, Rebecca; Hong, Mary; Joshi, Dhruv; Bolton, Eric; Tajkhorshid, Emad; Chung, Hee Jung | Scientific reports | 32179837 | 2020 03 16 |
| Human rDNA copy number is unstable in metastatic breast cancers. | Valori, Virginia; Tus, Katalin; Laukaitis, Christina; Harris, David T; LeBeau, Lauren; Maggert, Keith A | Epigenetics | 31352858 | 2020 Jan - Feb |
| Social behavior in mice following chronic optogenetic stimulation of hippocampal engrams. | Doucette, Emily; Merfeld, Emily; Leblanc, Heloise; Monasterio, Amy; Cincotta, Christine; Grella, Stephanie L; Logan, Jesse; Ramirez, Steve | Neurobiology of learning and memory | 33164892 | 2020 12 |
| Evolution of the Autism-Associated Neuroligin-4 Gene Reveals Broad Erosion of Pseudoautosomal Regions in Rodents. | Maxeiner, Stephan; Benseler, Fritz; Krasteva-Christ, Gabriela; Brose, Nils; Südhof, Thomas C | Molecular biology and evolution | 32011705 | 2020 05 01 |
| Cryo-EM sample preparation method for extremely low concentration liposomes. | Tonggu, Lige; Wang, Liguo | Ultramicroscopy | 31622807 | 2020 01 |
| Dynamics of shape recovery by stored red blood cells during washing at the single cell level. | Lu, Madeleine; Shevkoplyas, Sergey S | Transfusion | 32748970 | 2020 10 |
| Surgical Field Visualization during Functional Endoscopic Sinus Surgery: Comparison of Propofol- vs Desflurane-Based Anesthesia. | Gollapudy, Suneeta; Gashkoff, Drake A; Poetker, David M; Loehrl, Todd A; Riess, Matthias L | Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery | 32450733 | 2020 10 |
| Poloxamer 188 Protects Isolated Adult Mouse Cardiomyocytes from Reoxygenation Injury. | Salzman, Michele M; Bartos, Jason A; Yannopoulos, Demetris; Riess, Matthias L | Pharmacology research & perspectives | 33073927 | 2020 12 |
| Single-shot ultrafast imaging attaining 70 trillion frames per second. | Wang, Peng; Liang, Jinyang; Wang, Lihong V | Nature communications | 32350256 | 2020 04 29 |
| Single-shot stereo-polarimetric compressed ultrafast photography for light-speed observation of high-dimensional optical transients with picosecond resolution. | Liang, Jinyang; Wang, Peng; Zhu, Liren; Wang, Lihong V | Nature communications | 33067438 | 2020 10 16 |
| Label-free imaging of lipid-rich biological tissues by mid-infrared photoacoustic microscopy. | He, Yun; Shi, Junhui; Pleitez, Miguel A; Maslov, Konstantin; Wagenaar, Daniel A; Wang, Lihong V | Journal of biomedical optics | 33118344 | 2020 10 |
| Cell-Surface Proteomic Profiling in the Fly Brain Uncovers Wiring Regulators. | Li, Jiefu; Han, Shuo; Li, Hongjie; Udeshi, Namrata D; Svinkina, Tanya; Mani, D R; Xu, Chuanyun; Guajardo, Ricardo; Xie, Qijing; Li, Tongchao; Luginbuhl, David J; Wu, Bing; McLaughlin, Colleen N; Xie, Anthony; Kaewsapsak, Pornchai; Quake, Stephen R; Carr, Steven A; Ting, Alice Y; Luo, Liqun | Cell | 31955847 | 2020 01 23 |
| Novel Genetically Encoded Bright Positive Calcium Indicator NCaMP7 Based on the mNeonGreen Fluorescent Protein. | Subach, Oksana M; Sotskov, Vladimir P; Plusnin, Viktor V; Gruzdeva, Anna M; Barykina, Natalia V; Ivashkina, Olga I; Anokhin, Konstantin V; Nikolaeva, Alena Y; Korzhenevskiy, Dmitry A; Vlaskina, Anna V; Lazarenko, Vladimir A; Boyko, Konstantin M; Rakitina, Tatiana V; Varizhuk, Anna M; Pozmogova, Galina E; Podgorny, Oleg V; Piatkevich, Kiryl D; Boyden, Edward S; Subach, Fedor V | International journal of molecular sciences | 32121243 | 2020 Feb 28 |
| Spatial Multiplexing of Fluorescent Reporters for Imaging Signaling Network Dynamics. | Linghu, Changyang; Johnson, Shannon L; Valdes, Pablo A; Shemesh, Or A; Park, Won Min; Park, Demian; Piatkevich, Kiryl D; Wassie, Asmamaw T; Liu, Yixi; An, Bobae; Barnes, Stephanie A; Celiker, Orhan T; Yao, Chun-Chen; Yu, Chih-Chieh Jay; Wang, Ru; Adamala, Katarzyna P; Bear, Mark F; Keating, Amy E; Boyden, Edward S | Cell | 33232692 | 2020 12 10 |
| Lipid Bicelle Micropatterning Using Chemical Lift-Off Lithography. | Belling, Jason N; Cheung, Kevin M; Jackman, Joshua A; Sut, Tun Naw; Allen, Matthew; Park, Jae Hyeon; Jonas, Steven J; Cho, Nam-Joon; Weiss, Paul S | ACS applied materials & interfaces | 32092250 | 2020 Mar 18 |
| Detecting DNA and RNA and Differentiating Single-Nucleotide Variations via Field-Effect Transistors. | Cheung, Kevin M; Abendroth, John M; Nakatsuka, Nako; Zhu, Bowen; Yang, Yang; Andrews, Anne M; Weiss, Paul S | Nano letters | 32706969 | 2020 08 12 |
| A 3D culture platform enables development of zinc-binding prodrugs for targeted proliferation of β cells. | Yang, Kisuk; Lee, Miseon; Jones, Peter Anthony; Liu, Sophie S; Zhou, Angela; Xu, Jun; Sreekanth, Vedagopuram; Wu, Jamie L Y; Vo, Lillian; Lee, Eunjee A; Pop, Ramona; Lee, Yuhan; Wagner, Bridget K; Melton, Douglas A; Choudhary, Amit; Karp, Jeffrey M | Science advances | 33208361 | 2020 11 |
| Microbiota-modulated CART+ enteric neurons autonomously regulate blood glucose. | Muller, Paul A; Matheis, Fanny; Schneeberger, Marc; Kerner, Zachary; Jové, Veronica; Mucida, Daniel | Science (New York, N.Y.) | 32855216 | 2020 10 16 |
| Primary Role of the Nucleosome. | Kornberg, Roger D; Lorch, Yahli | Molecular cell | 32763226 | 2020 08 06 |
| RNA-protein interaction mapping via MS2- or Cas13-based APEX targeting. | Han, Shuo; Zhao, Boxuan Simen; Myers, Samuel A; Carr, Steven A; He, Chuan; Ting, Alice Y | Proceedings of the National Academy of Sciences of the United States of America | 32839320 | 2020 09 08 |
| 11C-PABA as a PET Radiotracer for Functional Renal Imaging: Preclinical and First-in-Human Study. | Ruiz-Bedoya, Camilo A; Ordonez, Alvaro A; Werner, Rudolf A; Plyku, Donika; Klunk, Mariah H; Leal, Jeff; Lesniak, Wojciech G; Holt, Daniel P; Dannals, Robert F; Higuchi, Takahiro; Rowe, Steven P; Jain, Sanjay K | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 32198314 | 2020 11 |
| A Psychological Profile of the Alt-Right. | Forscher, Patrick S; Kteily, Nour S | Perspectives on psychological science : a journal of the Association for Psychological Science | 31747343 | 2020 01 |
| Pericentromeric heterochromatin is hierarchically organized and spatially contacts H3K9me2 islands in euchromatin. | Lee, Yuh Chwen G; Ogiyama, Yuki; Martins, Nuno M C; Beliveau, Brian J; Acevedo, David; Wu, C-Ting; Cavalli, Giacomo; Karpen, Gary H | PLoS genetics | 32203508 | 2020 03 |
| Multifunctional Pacemaker Lead for Cardiac Energy Harvesting and Pressure Sensing. | Dong, Lin; Closson, Andrew B; Jin, Congran; Nie, Yuan; Cabe, Andrew; Escobedo, Danny; Huang, Shicheng; Trase, Ian; Xu, Zhe; Chen, Zi; Feldman, Marc D; Zhang, John X J | Advanced healthcare materials | 32347010 | 2020 06 |
| Rapid Emergence of SARS-CoV-2 in the Greater New York Metropolitan Area: Geolocation, Demographics, Positivity Rates, and Hospitalization for 46 793 Persons Tested by Northwell Health. | Reichberg, Samuel B; Mitra, Partha P; Haghamad, Aya; Ramrattan, Girish; Crawford, James M; Northwell COVID-19 Research Consortium; Berry, Gregory J; Davidson, Karina W; Drach, Alex; Duong, Scott; Juretschko, Stefan; Maria, Naomi I; Yang, Yihe; Ziemba, Yonah C | Clinical infectious diseases : an official publication of the Infectious Diseases Society of America | 32640030 | 2020 12 15 |
| Machine learning to assist clinical decision-making during the COVID-19 pandemic. | Debnath, Shubham; Barnaby, Douglas P; Coppa, Kevin; Makhnevich, Alexander; Kim, Eun Ji; Chatterjee, Saurav; Tóth, Viktor; Levy, Todd J; Paradis, Marc D; Cohen, Stuart L; Hirsch, Jamie S; Zanos, Theodoros P; Northwell COVID-19 Research Consortium | Bioelectronic medicine | 32665967 | 2020 |
| Intersectional Identity and Racial Inequality During the COVID-19 Pandemic: Perspectives of Black Physician Mothers. | Louisias, Margee; Marrast, Lyndonna | Journal of women's health (2002) | 32762601 | 2020 09 |
| CRISPR-Based Therapeutic Genome Editing: Strategies and In Vivo Delivery by AAV Vectors. | Wang, Dan; Zhang, Feng; Gao, Guangping | Cell | 32243786 | 2020 04 02 |
| Detection of SARS-CoV-2 with SHERLOCK One-Pot Testing. | Joung, Julia; Ladha, Alim; Saito, Makoto; Kim, Nam-Gyun; Woolley, Ann E; Segel, Michael; Barretto, Robert P J; Ranu, Amardeep; Macrae, Rhiannon K; Faure, Guilhem; Ioannidi, Eleonora I; Krajeski, Rohan N; Bruneau, Robert; Huang, Meei-Li W; Yu, Xu G; Li, Jonathan Z; Walker, Bruce D; Hung, Deborah T; Greninger, Alexander L; Jerome, Keith R; Gootenberg, Jonathan S; Abudayyeh, Omar O; Zhang, Feng | The New England journal of medicine | 32937062 | 2020 Oct 08 |
| Genome-Scale Imaging of the 3D Organization and Transcriptional Activity of Chromatin. | Su, Jun-Han; Zheng, Pu; Kinrot, Seon S; Bintu, Bogdan; Zhuang, Xiaowei | Cell | 32822575 | 2020 Sep 17 |
| Transcriptional and Functional Changes of the Human Microvasculature during Physiological Aging and Alzheimer Disease. | Bersini, Simone; Arrojo E Drigo, Rafael; Huang, Ling; Shokhirev, Maxim N; Hetzer, Martin W | Advanced biosystems | 32402127 | 2020 05 |
| Dynamic regulation of histone modifications and long-range chromosomal interactions during postmitotic transcriptional reactivation. | Kang, Hyeseon; Shokhirev, Maxim N; Xu, Zhichao; Chandran, Sahaana; Dixon, Jesse R; Hetzer, Martin W | Genes & development | 32499403 | 2020 Jul 01 |
| Multi-omic, Single-Cell, and Biochemical Profiles of Astronauts Guide Pharmacological Strategies for Returning to Gravity. | Gertz, Monica L; Chin, Christopher R; Tomoiaga, Delia; MacKay, Matthew; Chang, Christina; Butler, Daniel; Afshinnekoo, Ebrahim; Bezdan, Daniela; Schmidt, Michael A; Mozsary, Christopher; Melnick, Ari; Garrett-Bakelman, Francine; Crucian, Brian; Lee, Stuart M C; Zwart, Sara R; Smith, Scott M; Meydan, Cem; Mason, Christopher E | Cell reports | 33242408 | 2020 12 08 |
| Cell-free DNA (cfDNA) and Exosome Profiling from a Year-Long Human Spaceflight Reveals Circulating Biomarkers. | Bezdan, Daniela; Grigorev, Kirill; Meydan, Cem; Pelissier Vatter, Fanny A; Cioffi, Michele; Rao, Varsha; MacKay, Matthew; Nakahira, Kiichi; Burnham, Philip; Afshinnekoo, Ebrahim; Westover, Craig; Butler, Daniel; Mozsary, Chris; Donahoe, Timothy; Foox, Jonathan; Mishra, Tejaswini; Lucotti, Serena; Rana, Brinda K; Melnick, Ari M; Zhang, Haiying; Matei, Irina; Kelsen, David; Yu, Kenneth; Lyden, David C; Taylor, Lynn; Bailey, Susan M; Snyder, Michael P; Garrett-Bakelman, Francine E; Ossowski, Stephan; De Vlaminck, Iwijn; Mason, Christopher E | iScience | 33376973 | 2020 Dec 18 |
| SYNPLA, a method to identify synapses displaying plasticity after learning. | Dore, Kim; Pao, Yvonne; Soria Lopez, Jose; Aronson, Sage; Zhan, Huiqing; Ghosh, Sanchari; Merrill, Sabina; Zador, Anthony M; Malinow, Roberto; Kebschull, Justus M | Proceedings of the National Academy of Sciences of the United States of America | 31974314 | 2020 02 11 |
| RNA Identification of PRIME Cells Predicting Rheumatoid Arthritis Flares. | Orange, Dana E; Yao, Vicky; Sawicka, Kirsty; Fak, John; Frank, Mayu O; Parveen, Salina; Blachere, Nathalie E; Hale, Caryn; Zhang, Fan; Raychaudhuri, Soumya; Troyanskaya, Olga G; Darnell, Robert B | The New England journal of medicine | 32668112 | 2020 07 16 |
| Feeling Things Out: Bidirectional Signaling of the Cell-ECM Interface, Implications in the Mechanobiology of Cell Spreading, Migration, Proliferation, and Differentiation. | Miller, Andrew E; Hu, Ping; Barker, Thomas H | Advanced healthcare materials | 32037719 | 2020 04 |
| Multi-scale models of lung fibrosis. | Leonard-Duke, Julie; Evans, Stephanie; Hannan, Riley T; Barker, Thomas H; Bates, Jason H T; Bonham, Catherine A; Moore, Bethany B; Kirschner, Denise E; Peirce, Shayn M | Matrix biology : journal of the International Society for Matrix Biology | 32438056 | 2020 09 |
| Expansion microscopy of C. elegans. | Yu, Chih-Chieh Jay; Barry, Nicholas C; Wassie, Asmamaw T; Sinha, Anubhav; Bhattacharya, Abhishek; Asano, Shoh; Zhang, Chi; Chen, Fei; Hobert, Oliver; Goodman, Miriam B; Haspel, Gal; Boyden, Edward S | eLife | 32356725 | 2020 05 01 |
| A low-power band of neuronal spiking activity dominated by local single units improves the performance of brain-machine interfaces. | Nason, Samuel R; Vaskov, Alex K; Willsey, Matthew S; Welle, Elissa J; An, Hyochan; Vu, Philip P; Bullard, Autumn J; Nu, Chrono S; Kao, Jonathan C; Shenoy, Krishna V; Jang, Taekwang; Kim, Hun-Seok; Blaauw, David; Patil, Parag G; Chestek, Cynthia A | Nature biomedical engineering | 32719512 | 2020 10 |
| An Individual Interneuron Participates in Many Kinds of Inhibition and Innervates Much of the Mouse Visual Thalamus. | Morgan, Josh L; Lichtman, Jeff W | Neuron | 32142646 | 2020 05 06 |
| A Brain to Spine Interface for Transferring Artificial Sensory Information. | Yadav, Amol P; Li, Daniel; Nicolelis, Miguel A L | Scientific reports | 31964948 | 2020 01 21 |
| BRICseq Bridges Brain-wide Interregional Connectivity to Neural Activity and Gene Expression in Single Animals. | Huang, Longwen; Kebschull, Justus M; Fürth, Daniel; Musall, Simon; Kaufman, Matthew T; Churchland, Anne K; Zador, Anthony M | Cell | 32619423 | 2020 07 09 |
| Nup93 regulates breast tumor growth by modulating cell proliferation and actin cytoskeleton remodeling. | Bersini, Simone; Lytle, Nikki K; Schulte, Roberta; Huang, Ling; Wahl, Geoffrey M; Hetzer, Martin W | Life science alliance | 31959624 | 2020 01 |
| Preclinical translation of exosomes derived from mesenchymal stem/stromal cells. | Elahi, Fanny M; Farwell, D Gregory; Nolta, Jan A; Anderson, Johnathon D | Stem cells (Dayton, Ohio) | 31381842 | 2020 01 |
| An Aptamer-Nanotrain Assembled from Six-Letter DNA Delivers Doxorubicin Selectively to Liver Cancer Cells. | Zhang, Liqin; Wang, Sai; Yang, Zunyi; Hoshika, Shuichi; Xie, Sitao; Li, Jin; Chen, Xigao; Wan, Shuo; Li, Long; Benner, Steven A; Tan, Weihong | Angewandte Chemie (International ed. in English) | 31650689 | 2020 01 07 |
| Building better polymerases: Engineering the replication of expanded genetic alphabets. | Ouaray, Zahra; Benner, Steven A; Georgiadis, Millie M; Richards, Nigel G J | The Journal of biological chemistry | 33004440 | 2020 12 11 |
| A structural variation reference for medical and population genetics. | Collins, Ryan L; Brand, Harrison; Karczewski, Konrad J; Zhao, Xuefang; Alföldi, Jessica; Francioli, Laurent C; Khera, Amit V; Lowther, Chelsea; Gauthier, Laura D; Wang, Harold; Watts, Nicholas A; Solomonson, Matthew; O'Donnell-Luria, Anne; Baumann, Alexander; Munshi, Ruchi; Walker, Mark; Whelan, Christopher W; Huang, Yongqing; Brookings, Ted; Sharpe, Ted; Stone, Matthew R; Valkanas, Elise; Fu, Jack; Tiao, Grace; Laricchia, Kristen M; Ruano-Rubio, Valentin; Stevens, Christine; Gupta, Namrata; Cusick, Caroline; Margolin, Lauren; Genome Aggregation Database Production Team; Genome Aggregation Database Consortium; Taylor, Kent D; Lin, Henry J; Rich, Stephen S; Post, Wendy S; Chen, Yii-Der Ida; Rotter, Jerome I; Nusbaum, Chad; Philippakis, Anthony; Lander, Eric; Gabriel, Stacey; Neale, Benjamin M; Kathiresan, Sekar; Daly, Mark J; Banks, Eric; MacArthur, Daniel G; Talkowski, Michael E | Nature | 32461652 | 2020 May |
| Discriminatory Power of Combinatorial Antigen Recognition in Cancer T Cell Therapies. | Dannenfelser, Ruth; Allen, Gregory M; VanderSluis, Benjamin; Koegel, Ashley K; Levinson, Sarah; Stark, Sierra R; Yao, Vicky; Tadych, Alicja; Troyanskaya, Olga G; Lim, Wendell A | Cell systems | 32916097 | 2020 09 23 |
| Subsecond total-body imaging using ultrasensitive positron emission tomography. | Zhang, Xuezhu; Cherry, Simon R; Xie, Zhaoheng; Shi, Hongcheng; Badawi, Ramsey D; Qi, Jinyi | Proceedings of the National Academy of Sciences of the United States of America | 31964808 | 2020 02 04 |
| Flexible Multiplexed In2O3 Nanoribbon Aptamer-Field-Effect Transistors for Biosensing. | Liu, Qingzhou; Zhao, Chuanzhen; Chen, Mingrui; Liu, Yihang; Zhao, Zhiyuan; Wu, Fanqi; Li, Zhen; Weiss, Paul S; Andrews, Anne M; Zhou, Chongwu | iScience | 33083757 | 2020 Sep 25 |
| Insights Obtained by Culturing Saccharibacteria With Their Bacterial Hosts. | Bor, B; Collins, A J; Murugkar, P P; Balasubramanian, S; To, T T; Hendrickson, E L; Bedree, J K; Bidlack, F B; Johnston, C D; Shi, W; McLean, J S; He, X; Dewhirst, F E | Journal of dental research | 32075512 | 2020 Jun |
| Complete Genome Sequences and Methylome Analyses of Cutibacterium acnes subsp. acnes Strains DSM 16379 and DSM 1897T. | Deptula, Paulina; Laine, Pia; Paulin, Lars; Auvinen, Petri; Roberts, Richard J; Johnston, Christopher D; Varmanen, Pekka | Microbiology resource announcements | 32675190 | 2020 Jul 16 |
| Estimating and testing the microbial causal mediation effect with high-dimensional and compositional microbiome data. | Wang, Chan; Hu, Jiyuan; Blaser, Martin J; Li, Huilin | Bioinformatics (Oxford, England) | 31329243 | 2020 Jan 15 |
| Three-dimensional nanoscopy of whole cells and tissues with in situ point spread function retrieval. | Xu, Fan; Ma, Donghan; MacPherson, Kathryn P; Liu, Sheng; Bu, Ye; Wang, Yu; Tang, Yu; Bi, Cheng; Kwok, Tim; Chubykin, Alexander A; Yin, Peng; Calve, Sarah; Landreth, Gary E; Huang, Fang | Nature methods | 32371980 | 2020 05 |
| Radiosynthesis and Biodistribution of 18F-Linezolid in Mycobacterium tuberculosis-Infected Mice Using Positron Emission Tomography. | Mota, Filipa; Jadhav, Ravindra; Ruiz-Bedoya, Camilo A; Ordonez, Alvaro A; Klunk, Mariah H; Freundlich, Joel S; Jain, Sanjay K | ACS infectious diseases | 32243132 | 2020 05 08 |
| Nick-seq for single-nucleotide resolution genomic maps of DNA modifications and damage. | Cao, Bo; Wu, Xiaolin; Zhou, Jieliang; Wu, Hang; Liu, Lili; Zhang, Qinghua; DeMott, Michael S; Gu, Chen; Wang, Lianrong; You, Delin; Dedon, Peter C | Nucleic acids research | 32484547 | 2020 07 09 |
| Exercise rejuvenates quiescent skeletal muscle stem cells in old mice through restoration of Cyclin D1. | Brett, Jamie O; Arjona, Marina; Ikeda, Mika; Quarta, Marco; de Morrée, Antoine; Egner, Ingrid M; Perandini, Luiz A; Ishak, Heather D; Goshayeshi, Armon; Benjamin, Daniel I; Both, Pieter; Rodríguez-Mateo, Cristina; Betley, Michael J; Wyss-Coray, Tony; Rando, Thomas A | Nature metabolism | 32601609 | 2020 04 |
| Gut microbiota plasticity is correlated with sustained weight loss on a low-carb or low-fat dietary intervention. | Grembi, Jessica A; Nguyen, Lan H; Haggerty, Thomas D; Gardner, Christopher D; Holmes, Susan P; Parsonnet, Julie | Scientific reports | 31996717 | 2020 Jan 29 |
| A key control point in the T cell response to chronic infection and neoplasia: FOXO1. | Marcel, Nimi; Hedrick, Stephen M | Current opinion in immunology | 32135399 | 2020 04 |
| Paenibacillus infection with frequent viral coinfection contributes to postinfectious hydrocephalus in Ugandan infants. | Paulson, Joseph N; Williams, Brent L; Hehnly, Christine; Mishra, Nischay; Sinnar, Shamim A; Zhang, Lijun; Ssentongo, Paddy; Mbabazi-Kabachelor, Edith; Wijetunge, Dona S S; von Bredow, Benjamin; Mulondo, Ronnie; Kiwanuka, Julius; Bajunirwe, Francis; Bazira, Joel; Bebell, Lisa M; Burgoine, Kathy; Couto-Rodriguez, Mara; Ericson, Jessica E; Erickson, Tim; Ferrari, Matthew; Gladstone, Melissa; Guo, Cheng; Haran, Murali; Hornig, Mady; Isaacs, Albert M; Kaaya, Brian Nsubuga; Kangere, Sheila M; Kulkarni, Abhaya V; Kumbakumba, Elias; Li, Xiaoxiao; Limbrick Jr, David D; Magombe, Joshua; Morton, Sarah U; Mugamba, John; Ng, James; Olupot-Olupot, Peter; Onen, Justin; Peterson, Mallory R; Roy, Farrah; Sheldon, Kathryn; Townsend, Reid; Weeks, Andrew D; Whalen, Andrew J; Quackenbush, John; Ssenyonga, Peter; Galperin, Michael Y; Almeida, Mathieu; Atkins, Hannah; Warf, Benjamin C; Lipkin, W Ian; Broach, James R; Schiff, Steven J | Science translational medicine | 32998967 | 2020 09 30 |
| Using a Culturally Tailored Narrative to Increase Cervical Cancer Detection Among Spanish-Speaking Mexican-American Women. | Ochoa, Carol Y; Murphy, Sheila T; Frank, Lauren B; Baezconde-Garbanati, Lourdes A | Journal of cancer education : the official journal of the American Association for Cancer Education | 31020621 | 2020 08 |
| High Frequency Spectral Ultrasound Imaging to Detect Metastasis in Implanted Biomaterial Scaffolds. | Bushnell, Grace G; Hong, Xiaowei; Hartfield, Rachel M; Zhang, Yining; Oakes, Robert S; Rao, Shreyas S; Jeruss, Jacqueline S; Stegemann, Jan P; Deng, Cheri X; Shea, Lonnie D | Annals of biomedical engineering | 31549327 | 2020 Jan |
| Metastatic Conditioning of Myeloid Cells at a Subcutaneous Synthetic Niche Reflects Disease Progression and Predicts Therapeutic Outcomes. | Oakes, Robert S; Bushnell, Grace G; Orbach, Sophia M; Kandagatla, Pridvi; Zhang, Yining; Morris, Aaron H; Hall, Matthew S; LaFaire, Petrina; Decker, Joseph T; Hartfield, Rachel M; Brooks, Michael D; Wicha, Max S; Jeruss, Jacqueline S; Shea, Lonnie D | Cancer research | 31662327 | 2020 02 01 |
| Spatiotemporal Antialiasing in Photoacoustic Computed Tomography. | Hu, Peng; Li, Lei; Lin, Li; Wang, Lihong V | IEEE transactions on medical imaging | 32746101 | 2020 Nov |
| Multifocal photoacoustic microscopy using a single-element ultrasonic transducer through an ergodic relay. | Li, Yang; Wong, Terence T W; Shi, Junhui; Hsu, Hsun-Chia; Wang, Lihong V | Light, science & applications | 32793336 | 2020 |
| Snapshot Photoacoustic Topography Through an Ergodic Relay for High-throughput Imaging of Optical Absorption. | Li, Yang; Li, Lei; Zhu, Liren; Maslov, Konstantin; Shi, Junhui; Hu, Peng; Bo, En; Yao, Junjie; Liang, Jinyang; Wang, Lidai; Wang, Lihong V | Nature photonics | 34178097 | 2020 Mar |
| Engineering cytokines and cytokine circuits. | Li, Aileen W; Lim, Wendell A | Science (New York, N.Y.) | 33243875 | 2020 11 27 |
| Mitoregulin Controls β-Oxidation in Human and Mouse Adipocytes. | Friesen, Max; Warren, Curtis R; Yu, Haojie; Toyohara, Takafumi; Ding, Qiurong; Florido, Mary H C; Sayre, Carolyn; Pope, Benjamin D; Goff, Loyal A; Rinn, John L; Cowan, Chad A | Stem cell reports | 32243843 | 2020 04 14 |
| Microphysiological System Design: Simplicity Is Elegance. | Hinman, Samuel S; Kim, Raehyun; Wang, Yuli; Phillips, K Scott; Attayek, Peter J; Allbritton, Nancy L | Current opinion in biomedical engineering | 32095672 | 2020 Mar |
| Native Zinc Catalyzes Selective and Traceless Release of Small Molecules in β-Cells. | Lee, Miseon; Maji, Basudeb; Manna, Debasish; Kahraman, Sevim; Elgamal, Ruth M; Small, Jonnell; Kokkonda, Praveen; Vetere, Amedeo; Goldberg, Jacob M; Lippard, Stephen J; Kulkarni, Rohit N; Wagner, Bridget K; Choudhary, Amit | Journal of the American Chemical Society | 32175731 | 2020 Apr 08 |
| Engineering designer beta cells with a CRISPR-Cas9 conjugation platform. | Lim, Donghyun; Sreekanth, Vedagopuram; Cox, Kurt J; Law, Benjamin K; Wagner, Bridget K; Karp, Jeffrey M; Choudhary, Amit | Nature communications | 32792475 | 2020 08 13 |
| In situ readout of DNA barcodes and single base edits facilitated by in vitro transcription. | Askary, Amjad; Sanchez-Guardado, Luis; Linton, James M; Chadly, Duncan M; Budde, Mark W; Cai, Long; Lois, Carlos; Elowitz, Michael B | Nature biotechnology | 31740838 | 2020 01 |
| BRICseq Bridges Brain-wide Interregional Connectivity to Neural Activity and Gene Expression in Single Animals. | Huang, Longwen; Kebschull, Justus M; Fürth, Daniel; Musall, Simon; Kaufman, Matthew T; Churchland, Anne K; Zador, Anthony M | Cell | 33357401 | 2020 Dec 23 |
| In Vivo Repair of a Protein Underlying a Neurological Disorder by Programmable RNA Editing. | Sinnamon, John R; Kim, Susan Y; Fisk, Jenna R; Song, Zhen; Nakai, Hiroyuki; Jeng, Sophia; McWeeney, Shannon K; Mandel, Gail | Cell reports | 32668243 | 2020 07 14 |
| Structural characterization of a peptoid-inspired conformationally constrained oligomer (PICCO) bound to streptavidin. | McEnaney , Patrick; Balzarini , Madeline; Park , Hajeung; Kodadek , Thomas | Chemical communications (Cambridge, England) | 32785302 | 2020 Sep 16 |
| Interaction of Alpha-Synuclein and Its Mutants with Rigid Lipid Vesicle Mimics of Varying Surface Curvature. | McClain, Sophia M; Ojoawo, Adedolapo M; Lin, Wayne; Rienstra, Chad M; Murphy, Catherine J | ACS nano | 32672441 | 2020 08 25 |
| Structural basis for the reaction cycle of DASS dicarboxylate transporters. | Sauer, David B; Trebesch, Noah; Marden, Jennifer J; Cocco, Nicolette; Song, Jinmei; Koide, Akiko; Koide, Shohei; Tajkhorshid, Emad; Wang, Da-Neng | eLife | 32869741 | 2020 Sep 01 |
| Picking Winners and Losers: Cell Competition in Tissue Development and Homeostasis. | Kim, Wonho; Jain, Rajan | Trends in genetics : TIG | 32418713 | 2020 07 |
| Gene regulation gravitates toward either addition or multiplication when combining the effects of two signals. | Sanford, Eric M; Emert, Benjamin L; Coté, Allison; Raj, Arjun | eLife | 33284110 | 2020 12 07 |
| Brain cell somatic gene recombination and its phylogenetic foundations. | Kaeser, Gwendolyn; Chun, Jerold | The Journal of biological chemistry | 32699111 | 2020 09 04 |
| Long-term activity drives dendritic branch elaboration of a C. elegans sensory neuron. | Cohn, Jesse A; Cebul, Elizabeth R; Valperga, Giulio; Brose, Lotti; de Bono, Mario; Heiman, Maxwell G; Pierce, Jonathan T | Developmental biology | 31945343 | 2020 05 01 |
| APP-Induced Patterned Neurodegeneration Is Exacerbated by APOE4 in Caenorhabditis elegans. | Sae-Lee, Wisath; Scott, Luisa L; Brose, Lotti; Encarnacion, Aliyah J; Shi, Ted; Kore, Pragati; Oyibo, Lashaun O; Ye, Congxi; Rozmiarek, Susan K; Pierce, Jonathan T | G3 (Bethesda, Md.) | 32580938 | 2020 08 05 |
| Widespread Prion-Based Control of Growth and Differentiation Strategies in Saccharomyces cerevisiae. | Itakura, Alan K; Chakravarty, Anupam K; Jakobson, Christopher M; Jarosz, Daniel F | Molecular cell | 31757756 | 2020 01 16 |
| BCALM (AC099524.1) Is a Human B Lymphocyte-Specific Long Noncoding RNA That Modulates B Cell Receptor-Mediated Calcium Signaling. | Pyfrom, Sarah C; Quinn, Chaz C; Dorando, Hannah K; Luo, Hong; Payton, Jacqueline E | Journal of immunology (Baltimore, Md. : 1950) | 32571842 | 2020 08 01 |
| Deep learning based feature-level integration of multi-omics data for breast cancer patients survival analysis. | Tong, Li; Mitchel, Jonathan; Chatlin, Kevin; Wang, May D | BMC medical informatics and decision making | 32933515 | 2020 09 15 |
| Real-time frequency-encoded spatiotemporal focusing through scattering media using a programmable 2D ultrafine optical frequency comb. | Wei, Xiaoming; Shen, Yuecheng; Jing, Joseph C; Hemphill, Ashton S; Yang, Changsheng; Xu, Shanhui; Yang, Zhongmin; Wang, Lihong V | Science advances | 32128401 | 2020 Feb |
| Label-free high-throughput photoacoustic tomography of suspected circulating melanoma tumor cells in patients in vivo. | Hai, Pengfei; Qu, Yuan; Li, Yang; Zhu, Liren; Shmuylovich, Leonid; Cornelius, Lynn A; Wang, Lihong V | Journal of biomedical optics | 32170857 | 2020 03 |
| Intelligently optimized digital optical phase conjugation with particle swarm optimization. | Cheng, Zhongtao; Yang, Jiamiao; Wang, Lihong V | Optics letters | 32747844 | 2020 Jan 15 |
| Transcranial photoacoustic computed tomography based on a layered back-projection method. | Na, Shuai; Yuan, Xiaoyun; Lin, Li; Isla, Julio; Garrett, David; Wang, Lihong V | Photoacoustics | 33134081 | 2020 Dec |
| Fighting against fast speckle decorrelation for light focusing inside live tissue by photon frequency shifting. | Yang, Jiamiao; Li, Lei; Li, Jingwei; Cheng, Zhongtao; Liu, Yan; Wang, Lihong V | ACS photonics | 34113691 | 2020 Mar 18 |
| PennPET Explorer: Design and Preliminary Performance of a Whole-Body Imager. | Karp, Joel S; Viswanath, Varsha; Geagan, Michael J; Muehllehner, Gerd; Pantel, Austin R; Parma, Michael J; Perkins, Amy E; Schmall, Jeffrey P; Werner, Matthew E; Daube-Witherspoon, Margaret E | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 31227573 | 2020 Jan |
| PET Parametric Imaging: Past, Present, and Future. | Wang, Guobao; Rahmim, Arman; Gunn, Roger N | IEEE transactions on radiation and plasma medical sciences | 33763624 | 2020 Nov |
| Rapid generation of potent antibodies by autonomous hypermutation in yeast. | Wellner, Alon; McMahon, Conor; Gilman, Morgan S A; Clements, Jonathan R; Clark, Sarah; Nguyen, Kianna M; Ho, Ming H; Shin, Jung-Eun; Feldman, Jared; Hauser, Blake M; Caradonna, Timothy M; Wingler, Laura M; Schmidt, Aaron G; Marks, Debora S; Abraham, Jonathan; Kruse, Andrew C; Liu, Chang C | bioRxiv : the preprint server for biology | 33200136 | 2020 Nov 11 |
| Differential Charging in Photoemission from Mercurated DNA Monolayers on Ferromagnetic Films. | Stemer, Dominik M; Abendroth, John M; Cheung, Kevin M; Ye, Matthew; El Hadri, Mohammed S; Fullerton, Eric E; Weiss, Paul S | Nano letters | 31960675 | 2020 02 12 |
| Lipid-Bicelle-Coated Microfluidics for Intracellular Delivery with Reduced Fouling. | Belling, Jason N; Heidenreich, Liv K; Park, Jae Hyeon; Kawakami, Lisa M; Takahashi, Jack; Frost, Isaura M; Gong, Yao; Young, Thomas D; Jackman, Joshua A; Jonas, Steven J; Cho, Nam-Joon; Weiss, Paul S | ACS applied materials & interfaces | 32940030 | 2020 Oct 14 |
| The G3BP1-Family-USP10 Deubiquitinase Complex Rescues Ubiquitinated 40S Subunits of Ribosomes Stalled in Translation from Lysosomal Degradation. | Meyer, Cindy; Garzia, Aitor; Morozov, Pavel; Molina, Henrik; Tuschl, Thomas | Molecular cell | 31981475 | 2020 03 19 |
| Proteins for increased surface expression of the α6β4 nicotinic acetylcholine receptor: nothing but good news? | Grant, Stephen; Lester, Henry A | The Journal of clinical investigation | 33074245 | 2020 11 02 |
| A Randomized Controlled Trial of an Integrated Brain, Body, and Social Intervention for Children With ADHD. | Smith, Stephanie D; Vitulano, Lawrence A; Katsovich, Liliya; Li, Shuaixing; Moore, Christina; Li, Fenghua; Grantz, Heidi; Zheng, Xixi; Eicher, Virginia; Aktan Guloksuz, Selin; Zheng, Yi; Dong, Jinxia; Sukhodolsky, Denis G; Leckman, James F | Journal of attention disorders | 27178060 | 2020 03 |
| In vivo mRNA display enables large-scale proteomics by next generation sequencing. | Oikonomou, Panos; Salatino, Roberto; Tavazoie, Saeed | Proceedings of the National Academy of Sciences of the United States of America | 33037152 | 2020 10 27 |
| SPARCL1 Promotes Excitatory But Not Inhibitory Synapse Formation and Function Independent of Neurexins and Neuroligins. | Gan, Kathlyn J; Südhof, Thomas C | The Journal of neuroscience : the official journal of the Society for Neuroscience | 32973045 | 2020 10 14 |
| Axial plane single-molecule super-resolution microscopy of whole cells. | An, Sha; Ziegler, Karl Ferdinand; Zhang, Peiyi; Wang, Yu; Kwok, Tim; Xu, Fan; Bi, Cheng; Matosevic, Sandro; Yin, Peng; Li, Tongcang; Huang, Fang | Biomedical optics express | 32010528 | 2020 Jan 01 |
| Caspase-Based PET for Evaluating Pro-Apoptotic Treatments in a Tuberculosis Mouse Model. | Ordonez, Alvaro A; Abhishek, Sudhanshu; Singh, Alok K; Klunk, Mariah H; Azad, Babak Benham; Aboagye, Eric O; Carroll, Laurence; Jain, Sanjay K | Molecular imaging and biology | 32232626 | 2020 12 |
| Stability and Viability of SARS-CoV-2. | Rubens, Jessica H; Karakousis, Petros C; Jain, Sanjay K | The New England journal of medicine | 32283575 | 2020 05 14 |
| Advanced imaging tools for childhood tuberculosis: potential applications and research needs. | Jain, Sanjay K; Andronikou, Savvas; Goussard, Pierre; Antani, Sameer; Gomez-Pastrana, David; Delacourt, Christophe; Starke, Jeffrey R; Ordonez, Alvaro A; Jean-Philippe, Patrick; Browning, Renee S; Perez-Velez, Carlos M | The Lancet. Infectious diseases | 32589869 | 2020 11 |
| Adaptable haemodynamic endothelial cells for organogenesis and tumorigenesis. | Palikuqi, Brisa; Nguyen, Duc-Huy T; Li, Ge; Schreiner, Ryan; Pellegata, Alessandro F; Liu, Ying; Redmond, David; Geng, Fuqiang; Lin, Yang; Gómez-Salinero, Jesus M; Yokoyama, Masataka; Zumbo, Paul; Zhang, Tuo; Kunar, Balvir; Witherspoon, Mavee; Han, Teng; Tedeschi, Alfonso M; Scottoni, Federico; Lipkin, Steven M; Dow, Lukas; Elemento, Olivier; Xiang, Jenny Z; Shido, Koji; Spence, Jason R; Zhou, Qiao J; Schwartz, Robert E; De Coppi, Paolo; Rabbany, Sina Y; Rafii, Shahin | Nature | 32908310 | 2020 09 |
| Microfluidics for ZnO micro-/nanomaterials development: rational design, controllable synthesis, and on-chip bioapplications. | Hao, Nanjing; Zhang, Michael; Zhang, John X J | Biomaterials science | 31965125 | 2020 Mar 31 |
| Effectiveness of interventions targeting self-regulation to improve adherence to chronic disease medications: a meta-review of meta-analyses. | Wilson, Tracey E; Hennessy, Emily A; Falzon, Louise; Boyd, Rebekah; Kronish, Ian M; Birk, Jeffrey L | Health psychology review | 31856664 | 2020 03 |
| Early Experience of COVID-19 in a US Children's Hospital. | Kainth, Mundeep K; Goenka, Pratichi K; Williamson, Kristy A; Fishbein, Joanna S; Subramony, Anupama; Barone, Stephen; Belfer, Joshua A; Feld, Lance M; Krief, William I; Palumbo, Nancy; Rajan, Sujatha; Rocker, Joshua; Scotto, Tiffany; Sharma, Smiriti; Sokoloff, William C; Schleien, Charles; Rubin, Lorry G; NORTHWELL HEALTH COVID-19 RESEARCH CONSORTIUM | Pediatrics | 32680880 | 2020 10 |
| Let Sleeping Patients Lie, avoiding unnecessary overnight vitals monitoring using a clinically based deep-learning model. | Tóth, Viktor; Meytlis, Marsha; Barnaby, Douglas P; Bock, Kevin R; Oppenheim, Michael I; Al-Abed, Yousef; McGinn, Thomas; Davidson, Karina W; Becker, Lance B; Hirsch, Jamie S; Zanos, Theodoros P | NPJ digital medicine | 33299116 | 2020 Nov 13 |
| A Survey of Genome Editing Activity for 16 Cas12a Orthologs. | Zetsche, Bernd; Abudayyeh, Omar O; Gootenberg, Jonathan S; Scott, David A; Zhang, Feng | The Keio journal of medicine | 31723075 | 2020 Sep 25 |
| In vivo Perturb-Seq reveals neuronal and glial abnormalities associated with autism risk genes. | Jin, Xin; Simmons, Sean K; Guo, Amy; Shetty, Ashwin S; Ko, Michelle; Nguyen, Lan; Jokhi, Vahbiz; Robinson, Elise; Oyler, Paul; Curry, Nathan; Deangeli, Giulio; Lodato, Simona; Levin, Joshua Z; Regev, Aviv; Zhang, Feng; Arlotta, Paola | Science (New York, N.Y.) | 33243861 | 2020 11 27 |
| Cardiac function modulates endocardial cell dynamics to shape the cardiac outflow tract. | Sidhwani, Pragya; Leerberg, Dena M; Boezio, Giulia L M; Capasso, Teresa L; Yang, Hongbo; Chi, Neil C; Roman, Beth L; Stainier, Didier Y R; Yelon, Deborah | Development (Cambridge, England) | 32439760 | 2020 Jun 17 |
| Heparin-mediated delivery of bone morphogenetic protein-2 improves spatial localization of bone regeneration. | Hettiaratchi, Marian H; Krishnan, Laxminarayanan; Rouse, Tel; Chou, Catherine; McDevitt, Todd C; Guldberg, Robert E | Science advances | 31922007 | 2020 01 |
| Population Density Modulates the Duration of Reproduction of C. elegans. | Wong, Spencer S; Yu, Jingfang; Schroeder, Frank C; Kim, Dennis H | Current biology : CB | 32442457 | 2020 07 06 |
| Multiple areas of the cerebral cortex influence the stomach. | Levinthal, David J; Strick, Peter L | Proceedings of the National Academy of Sciences of the United States of America | 32434910 | 2020 06 09 |
| Patient hiPSCs Identify Vascular Smooth Muscle Arylacetamide Deacetylase as Protective against Atherosclerosis. | Toyohara, Takafumi; Roudnicky, Filip; Florido, Mary H C; Nakano, Toshiaki; Yu, Haojie; Katsuki, Shunsuke; Lee, Minjin; Meissner, Torsten; Friesen, Max; Davidow, Lance S; Ptaszek, Leon; Abe, Takaaki; Rubin, Lee L; Pereira, Alexandre C; Aikawa, Masanori; Cowan, Chad A | Cell stem cell | 32413331 | 2020 07 02 |
| Evidence for Environmental-Human Microbiota Transfer at a Manufacturing Facility with Novel Work-related Respiratory Disease. | Wu, Benjamin G; Kapoor, Bianca; Cummings, Kristin J; Stanton, Marcia L; Nett, Randall J; Kreiss, Kathleen; Abraham, Jerrold L; Colby, Thomas V; Franko, Angela D; Green, Francis H Y; Sanyal, Soma; Clemente, Jose C; Gao, Zhan; Coffre, Maryaline; Meyn, Peter; Heguy, Adriana; Li, Yonghua; Sulaiman, Imran; Borbet, Timothy C; Koralov, Sergei B; Tallaksen, Robert J; Wendland, Douglas; Bachelder, Vance D; Boylstein, Randy J; Park, Ju-Hyeong; Cox-Ganser, Jean M; Virji, M Abbas; Crawford, Judith A; Edwards, Nicole T; Veillette, Marc; Duchaine, Caroline; Warren, Krista; Lundeen, Sarah; Blaser, Martin J; Segal, Leopoldo N | American journal of respiratory and critical care medicine | 32673495 | 2020 12 15 |
| Enterochromaffin Cell-Enriched Monolayer Platform for Assaying Serotonin Release from Human Primary Intestinal Cells. | Wang, Yuli; Sims, Christopher E; Allbritton, Nancy L | Analytical chemistry | 32819098 | 2020 09 15 |
| Regulation of insulin and adipokinetic hormone/glucagon production in flies. | Ahmad, Muhammad; He, Li; Perrimon, Norbert | Wiley interdisciplinary reviews. Developmental biology | 31379062 | 2020 03 |
| Parents' Expectations for and Reactions to Children's Racial Biases. | Scott, Katharine E; Shutts, Kristin; Devine, Patricia G | Child development | 30825398 | 2020 05 |
| Electrochemical Reduction and Oxidation of Eight Unnatural 2'-Deoxynucleosides at a Pyrolytic Graphite Electrode. | Špaček, Jan; Karalkar, Nilesh; Fojta, Miroslav; Wang, Joseph; Benner, Steven A | Electrochimica acta | 33087943 | 2020 Dec 01 |
| Computational Dissection of Membrane Transport at a Microscopic Level. | Jiang, Tao; Wen, Po-Chao; Trebesch, Noah; Zhao, Zhiyu; Pant, Shashank; Kapoor, Karan; Shekhar, Mrinal; Tajkhorshid, Emad | Trends in biochemical sciences | 31813734 | 2020 03 |
| Twisting and tilting of a mechanosensitive molecular probe detects order in membranes. | Licari, Giuseppe; Strakova, Karolina; Matile, Stefan; Tajkhorshid, Emad | Chemical science | 32864081 | 2020 Jun 14 |
| RNA sectors and allosteric function within the ribosome. | Walker, Allison S; Russ, William P; Ranganathan, Rama; Schepartz, Alanna | Proceedings of the National Academy of Sciences of the United States of America | 32747536 | 2020 Aug 18 |
| Upregulation of virulence genes promotes Vibrio cholerae biofilm hyperinfectivity. | Gallego-Hernandez, A L; DePas, W H; Park, J H; Teschler, J K; Hartmann, R; Jeckel, H; Drescher, K; Beyhan, S; Newman, D K; Yildiz, F H | Proceedings of the National Academy of Sciences of the United States of America | 32355001 | 2020 05 19 |
| PPARγ-Independent Side Effects of Thiazolidinediones on Mitochondrial Redox State in Rat Isolated Hearts. | Riess, Matthias L; Elorbany, Reem; Weihrauch, Dorothee; Stowe, David F; Camara, Amadou K S | Cells | 31968546 | 2020 01 20 |
| The Genetic Control of Stoichiometry Underlying Autism. | Darnell, Robert B | Annual review of neuroscience | 32640929 | 2020 07 08 |
| PRIME Cells Predicting Rheumatoid Arthritis Flares. Reply. | Orange, Dana E; Darnell, Robert B | The New England journal of medicine | 33053295 | 2020 Oct 15 |
| Impact of RNA-seq data analysis algorithms on gene expression estimation and downstream prediction. | Tong, Li; Wu, Po-Yen; Phan, John H; Hassazadeh, Hamid R; SEQC Consortium; Tong, Weida; Wang, May D | Scientific reports | 33087762 | 2020 10 21 |
| Microporous scaffolds loaded with immunomodulatory lentivirus to study the contribution of immune cell populations to tumor cell recruitment in vivo. | Bushnell, Grace G; Rao, Shreyas S; Hartfield, Rachel M; Zhang, Yining; Oakes, Robert S; Jeruss, Jacqueline S; Shea, Lonnie D | Biotechnology and bioengineering | 31544959 | 2020 01 |
| Genetically Modified T-Cell Therapy for Osteosarcoma: Into the Roaring 2020s. | DeRenzo, Christopher; Gottschalk, Stephen | Advances in experimental medicine and biology | 32483735 | 2020 |
| MyD88/CD40 signaling retains CAR T cells in a less differentiated state. | Prinzing, Brooke; Schreiner, Patrick; Bell, Matthew; Fan, Yiping; Krenciute, Giedre; Gottschalk, Stephen | JCI insight | 33148882 | 2020 11 05 |
| Spatio-temporal-spectral imaging of non-repeatable dissipative soliton dynamics. | Jing, Joseph C; Wei, Xiaoming; Wang, Lihong V | Nature communications | 32345966 | 2020 04 28 |
| Wave of single-impulse-stimulated fast initial dip in single vessels of mouse brains imaged by high-speed functional photoacoustic microscopy. | He, Yun; Shi, Junhui; Maslov, Konstantin I; Cao, Rui; Wang, Lihong V | Journal of biomedical optics | 32529816 | 2020 06 |
| Photoacoustic topography through an ergodic relay for functional imaging and biometric application in vivo. | Li, Yang; Li, Lei; Zhu, Liren; Shi, Junhui; Maslov, Konstantin; Wang, Lihong V | Journal of biomedical optics | 32648387 | 2020 07 |
| Harnessing a multi-dimensional fibre laser using genetic wavefront shaping. | Wei, Xiaoming; Jing, Joseph C; Shen, Yuecheng; Wang, Lihong V | Light, science & applications | 32884678 | 2020 |
| Total-Body Dynamic Reconstruction and Parametric Imaging on the uEXPLORER. | Zhang, Xuezhu; Xie, Zhaoheng; Berg, Eric; Judenhofer, Martin S; Liu, Weiping; Xu, Tianyi; Ding, Yu; Lv, Yang; Dong, Yun; Deng, Zilin; Tang, Songsong; Shi, Hongcheng; Hu, Pengcheng; Chen, Shuguang; Bao, Jun; Li, Hongdi; Zhou, Jian; Wang, Guobao; Cherry, Simon R; Badawi, Ramsey D; Qi, Jinyi | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 31302637 | 2020 02 |
| Gut macrophages: key players in intestinal immunity and tissue physiology. | Muller, Paul A; Matheis, Fanny; Mucida, Daniel | Current opinion in immunology | 31841704 | 2020 02 |
| Microbiota modulate sympathetic neurons via a gut-brain circuit. | Muller, Paul A; Schneeberger, Marc; Matheis, Fanny; Wang, Putianqi; Kerner, Zachary; Ilanges, Anoj; Pellegrino, Kyle; Del Mármol, Josefina; Castro, Tiago B R; Furuichi, Munehiro; Perkins, Matthew; Han, Wenfei; Rao, Arka; Pickard, Amanda J; Cross, Justin R; Honda, Kenya; de Araujo, Ivan; Mucida, Daniel | Nature | 32641826 | 2020 07 |
| Tunable dynamics of B cell selection in gut germinal centres. | Nowosad, Carla R; Mesin, Luka; Castro, Tiago B R; Wichmann, Christopher; Donaldson, Gregory P; Araki, Tatsuya; Schiepers, Ariën; Lockhart, Ainsley A K; Bilate, Angelina M; Mucida, Daniel; Victora, Gabriel D | Nature | 33116306 | 2020 12 |
| Rabbit model of Staphylococcus aureus implant-associated spinal infection. | Gordon, Oren; Miller, Robert J; Thompson, John M; Ordonez, Alvaro A; Klunk, Mariah H; Dikeman, Dustin A; Joyce, Daniel P; Ruiz-Bedoya, Camilo A; Miller, Lloyd S; Jain, Sanjay K | Disease models & mechanisms | 32586832 | 2020 07 28 |
| Microscopic Characterization of GRP1 PH Domain Interaction with Anionic Membranes. | Pant, Shashank; Tajkhorshid, Emad | Journal of computational chemistry | 31762060 | 2020 03 05 |
| Polymer-Peptide Conjugates Convert Amyloid into Protein Nanobundles through Fragmentation and Lateral Association. | Smith, John W; Jiang, Xing; An, Hyosung; Barclay, Alexander M; Licari, Giuseppe; Tajkhorshid, Emad; Moore, Edwin G; Rienstra, Chad M; Moore, Jeffrey S; Chen, Qian | ACS applied nano materials | 32149271 | 2020 Feb 28 |
| Membrane Interactions of Cy3 and Cy5 Fluorophores and Their Effects on Membrane-Protein Dynamics. | Lam, Kin; Tajkhorshid, Emad | Biophysical journal | 32533943 | 2020 07 07 |
| Aβ(1-42) tetramer and octamer structures reveal edge conductivity pores as a mechanism for membrane damage. | Ciudad, Sonia; Puig, Eduard; Botzanowski, Thomas; Meigooni, Moeen; Arango, Andres S; Do, Jimmy; Mayzel, Maxim; Bayoumi, Mariam; Chaignepain, Stéphane; Maglia, Giovanni; Cianferani, Sarah; Orekhov, Vladislav; Tajkhorshid, Emad; Bardiaux, Benjamin; Carulla, Natàlia | Nature communications | 32541820 | 2020 06 15 |
| An evolution-based model for designing chorismate mutase enzymes. | Russ, William P; Figliuzzi, Matteo; Stocker, Christian; Barrat-Charlaix, Pierre; Socolich, Michael; Kast, Peter; Hilvert, Donald; Monasson, Remi; Cocco, Simona; Weigt, Martin; Ranganathan, Rama | Science (New York, N.Y.) | 32703877 | 2020 Jul 24 |
| A modification of γ-encoded RN symmetry pulses for increasing the scaling factor and more accurate measurements of the strong heteronuclear dipolar couplings. | Nimerovsky, Evgeny; Soutar, Corinne P | Journal of magnetic resonance (San Diego, Calif. : 1997) | 32950918 | 2020 10 |
| Membrane surface recognition by the ASAP1 PH domain and consequences for interactions with the small GTPase Arf1. | Soubias, Olivier; Pant, Shashank; Heinrich, Frank; Zhang, Yue; Roy, Neeladri Sekhar; Li, Jess; Jian, Xiaoying; Yohe, Marielle E; Randazzo, Paul A; Lösche, Mathias; Tajkhorshid, Emad; Byrd, R Andrew | Science advances | 32998886 | 2020 09 |
| Hydrogen-deuterium exchange mass spectrometry captures distinct dynamics upon substrate and inhibitor binding to a transporter. | Jia, Ruyu; Martens, Chloe; Shekhar, Mrinal; Pant, Shashank; Pellowe, Grant A; Lau, Andy M; Findlay, Heather E; Harris, Nicola J; Tajkhorshid, Emad; Booth, Paula J; Politis, Argyris | Nature communications | 33268777 | 2020 12 02 |
| Social reprogramming in ants induces longevity-associated glia remodeling. | Sheng, Lihong; Shields, Emily J; Gospocic, Janko; Glastad, Karl M; Ratchasanmuang, Puttachai; Berger, Shelley L; Raj, Arjun; Little, Shawn; Bonasio, Roberto | Science advances | 32875108 | 2020 08 |
| 3D mapping and accelerated super-resolution imaging of the human genome using in situ sequencing. | Nguyen, Huy Q; Chattoraj, Shyamtanu; Castillo, David; Nguyen, Son C; Nir, Guy; Lioutas, Antonios; Hershberg, Elliot A; Martins, Nuno M C; Reginato, Paul L; Hannan, Mohammed; Beliveau, Brian J; Church, George M; Daugharthy, Evan R; Marti-Renom, Marc A; Wu, C-Ting | Nature methods | 32719531 | 2020 08 |
| Regulatory and evolutionary adaptation of yeast to acute lethal ethanol stress. | Yang, Jamie; Tavazoie, Saeed | PloS one | 33170850 | 2020 |
| Diverse enzymatic activities mediate antiviral immunity in prokaryotes. | Gao, Linyi; Altae-Tran, Han; Böhning, Francisca; Makarova, Kira S; Segel, Michael; Schmid-Burgk, Jonathan L; Koob, Jeremy; Wolf, Yuri I; Koonin, Eugene V; Zhang, Feng | Science (New York, N.Y.) | 32855333 | 2020 08 28 |
| Speech-related dorsal motor cortex activity does not interfere with iBCI cursor control. | Stavisky, Sergey D; Willett, Francis R; Avansino, Donald T; Hochberg, Leigh R; Shenoy, Krishna V; Henderson, Jaimie M | Journal of neural engineering | 32023225 | 2020 02 05 |
| Structure in Neural Activity during Observed and Executed Movements Is Shared at the Neural Population Level, Not in Single Neurons. | Jiang, Xiyuan; Saggar, Hemant; Ryu, Stephen I; Shenoy, Krishna V; Kao, Jonathan C | Cell reports | 32783934 | 2020 08 11 |
| High-fidelity musculoskeletal modeling reveals that motor planning variability contributes to the speed-accuracy tradeoff. | Al Borno, Mazen; Vyas, Saurabh; Shenoy, Krishna V; Delp, Scott L | eLife | 33325369 | 2020 12 16 |
| Video laryngoscopic oral intubation in rats: a simple and effective method. | Balzer, Claudius; Cleveland, William J; Jinka, Tulasi R; Riess, Matthias L | American journal of physiology. Lung cellular and molecular physiology | 32233786 | 2020 05 01 |
| Spatial-omics: Novel approaches to probe cell heterogeneity and extracellular matrix biology. | Bingham, Grace C; Lee, Fred; Naba, Alexandra; Barker, Thomas H | Matrix biology : journal of the International Society for Matrix Biology | 32416243 | 2020 09 |
| COVID-19 in kidney transplant recipients. | Nair, Vinay; Jandovitz, Nicholas; Hirsch, Jamie S; Nair, Gayatri; Abate, Mersema; Bhaskaran, Madhu; Grodstein, Elliot; Berlinrut, Ilan; Hirschwerk, David; Cohen, Stuart L; Davidson, Karina W; Dominello, Andrew J; Osorio, Gabrielle A; Richardson, Safiya; Teperman, Lewis W; Molmenti, Ernesto P | American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons | 32351040 | 2020 Jul |
| Prevalence of SARS-CoV-2 Antibodies in Health Care Personnel in the New York City Area. | Moscola, Joseph; Sembajwe, Grace; Jarrett, Mark; Farber, Bruce; Chang, Tylis; McGinn, Thomas; Davidson, Karina W; Northwell Health COVID-19 Research Consortium | JAMA | 32780804 | 2020 Sep 01 |
| Direct reprogramming of human smooth muscle and vascular endothelial cells reveals defects associated with aging and Hutchinson-Gilford progeria syndrome. | Bersini, Simone; Schulte, Roberta; Huang, Ling; Tsai, Hannah; Hetzer, Martin W | eLife | 32896271 | 2020 09 08 |
| Improved genetically encoded near-infrared fluorescent calcium ion indicators for in vivo imaging. | Qian, Yong; Cosio, Danielle M Orozco; Piatkevich, Kiryl D; Aufmkolk, Sarah; Su, Wan-Chi; Celiker, Orhan T; Schohl, Anne; Murdock, Mitchell H; Aggarwal, Abhi; Chang, Yu-Fen; Wiseman, Paul W; Ruthazer, Edward S; Boyden, Edward S; Campbell, Robert E | PLoS biology | 33232322 | 2020 11 |
| Near-Infrared Optical Nanosensors for Continuous Detection of Glucose. | Le, Long V; Chendke, Gauree S; Gamsey, Soya; Wisniewski, Natalie; Desai, Tejal A | Journal of diabetes science and technology | 31709808 | 2020 03 |
| Design, validation and evaluation of a SYBR green-based quantitative PCR array for comprehensive analysis of adenovirus type 5 transcriptional patterns. | Nebeluk, Nazary; Foster, Timothy P | Journal of virological methods | 32413477 | 2020 07 |
| Inflammation in acquired hydrocephalus: pathogenic mechanisms and therapeutic targets. | Karimy, Jason K; Reeves, Benjamin C; Damisah, Eyiyemisi; Duy, Phan Q; Antwi, Prince; David, Wyatt; Wang, Kevin; Schiff, Steven J; Limbrick Jr, David D; Alper, Seth L; Warf, Benjamin C; Nedergaard, Maiken; Simard, J Marc; Kahle, Kristopher T | Nature reviews. Neurology | 32152460 | 2020 05 |
| Tracking and predicting the African COVID-19 pandemic. | Ssentongo, Paddy; Fronterre, Claudio; Geronimo, Andrew; Greybush, Steven J; Mbabazi, Pamela K; Muvawala, Joseph; Nahalamba, Sarah B; Omadi, Philip O; Opar, Bernard T; Sinnar, Shamim A; Wang, Yan; Whalen, Andrew J; Held, Leonhard; Jewell, Chris; Muwanguzi, Abraham J B; Greatrex, Helen; Norton, Michael M; Diggle, Peter; Schiff, Steven J | medRxiv : the preprint server for health sciences | 33236036 | 2020 Nov 16 |
| Hepatic NADH reductive stress underlies common variation in metabolic traits. | Goodman, Russell P; Markhard, Andrew L; Shah, Hardik; Sharma, Rohit; Skinner, Owen S; Clish, Clary B; Deik, Amy; Patgiri, Anupam; Hsu, Yu-Han H; Masia, Ricard; Noh, Hye Lim; Suk, Sujin; Goldberger, Olga; Hirschhorn, Joel N; Yellen, Gary; Kim, Jason K; Mootha, Vamsi K | Nature | 32461692 | 2020 Jul |
| Metagenomic sequencing of stool samples in Bangladeshi infants: virome association with poliovirus shedding after oral poliovirus vaccination. | Tan, Susanna K; Granados, Andrea C; Bouquet, Jerome; Hoy-Schulz, Yana Emmy; Green, Lauri; Federman, Scot; Stryke, Doug; Haggerty, Thomas D; Ley, Catherine; Yeh, Ming-Te; Jannat, Kaniz; Maldonado, Yvonne A; Andino, Raul; Parsonnet, Julie; Chiu, Charles Y | Scientific reports | 32958861 | 2020 09 21 |
| A Non-amyloid Prion Particle that Activates a Heritable Gene Expression Program. | Chakravarty, Anupam K; Smejkal, Tina; Itakura, Alan K; Garcia, David M; Jarosz, Daniel F | Molecular cell | 31757755 | 2020 Jan 16 |
| COVID-19 is an emergent disease of aging. | Santesmasses, Didac; Castro, José Pedro; Zenin, Aleksandr A; Shindyapina, Anastasia V; Gerashchenko, Maxim V; Zhang, Bohan; Kerepesi, Csaba; Yim, Sun Hee; Fedichev, Peter O; Gladyshev, Vadim N | Aging cell | 33006233 | 2020 Oct |
| Reprogramming to recover youthful epigenetic information and restore vision. | Lu, Yuancheng; Brommer, Benedikt; Tian, Xiao; Krishnan, Anitha; Meer, Margarita; Wang, Chen; Vera, Daniel L; Zeng, Qiurui; Yu, Doudou; Bonkowski, Michael S; Yang, Jae-Hyun; Zhou, Songlin; Hoffmann, Emma M; Karg, Margarete M; Schultz, Michael B; Kane, Alice E; Davidsohn, Noah; Korobkina, Ekaterina; Chwalek, Karolina; Rajman, Luis A; Church, George M; Hochedlinger, Konrad; Gladyshev, Vadim N; Horvath, Steve; Levine, Morgan E; Gregory-Ksander, Meredith S; Ksander, Bruce R; He, Zhigang; Sinclair, David A | Nature | 33268865 | 2020 Dec |
| An In Vitro Model for Identifying Cardiac Side Effects of Anesthetics. | Chang, Alex C Y; Chang, Andrew C H; Nicin, Luka; Weber, Gerhard J; Holbrook, Colin; Davies, M Frances; Blau, Helen M; Bertaccini, Edward J | Anesthesia and analgesia | 30198930 | 2020 01 |
| Generation and Validation of an Antibody to Canine CD19 for Diagnostic and Future Therapeutic Purposes. | Haran, Kumudhini Preethi; Lockhart, Alexandra; Xiong, Ailian; Radaelli, Enrico; Savickas, Patrick J; Posey, Avery; Mason, Nicola J | Veterinary pathology | 32081102 | 2020 03 |
| Stem Cell Quiescence: Dynamism, Restraint, and Cellular Idling. | van Velthoven, Cindy T J; Rando, Thomas A | Cell stem cell | 30735649 | 2019 Feb 07 |
| Mesenchymal Stromal Cells Are Required for Regeneration and Homeostatic Maintenance of Skeletal Muscle. | Wosczyna, Michael N; Konishi, Colin T; Perez Carbajal, Edgar E; Wang, Theodore T; Walsh, Rachel A; Gan, Qiang; Wagner, Mark W; Rando, Thomas A | Cell reports | 31091443 | 2019 05 14 |
| Effect of Food Predictability on Life Span in Male Mice. | Rowland, Neil E; Robertson, Kimberly L; Minaya, Dulce; Minervini, Vanessa; Cervantez, Melissa; Kaiser, Kathryn A; Allison, David B | The journals of gerontology. Series A, Biological sciences and medical sciences | 30289438 | 2019 07 12 |
| Caspase-8 restricts natural killer cell accumulation during MCMV Infection. | Feng, Yanjun; Daley-Bauer, Lisa P; Roback, Linda; Potempa, Marc; Lanier, Lewis L; Mocarski, Edward S | Medical microbiology and immunology | 31115653 | 2019 Aug |
| A highly efficient and faithful MDS patient-derived xenotransplantation model for pre-clinical studies. | Song, Yuanbin; Rongvaux, Anthony; Taylor, Ashley; Jiang, Tingting; Tebaldi, Toma; Balasubramanian, Kunthavai; Bagale, Arun; Terzi, Yunus Kasim; Gbyli, Rana; Wang, Xiaman; Fu, Xiaoying; Gao, Yimeng; Zhao, Jun; Podoltsev, Nikolai; Xu, Mina; Neparidze, Natalia; Wong, Ellice; Torres, Richard; Bruscia, Emanuela M; Kluger, Yuval; Manz, Markus G; Flavell, Richard A; Halene, Stephanie | Nature communications | 30664659 | 2019 01 21 |
| PLAIDOH: a novel method for functional prediction of long non-coding RNAs identifies cancer-specific LncRNA activities. | Pyfrom, Sarah C; Luo, Hong; Payton, Jacqueline E | BMC genomics | 30767760 | 2019 Feb 15 |
| Population imaging of neural activity in awake behaving mice. | Piatkevich, Kiryl D; Bensussen, Seth; Tseng, Hua-An; Shroff, Sanaya N; Lopez-Huerta, Violeta Gisselle; Park, Demian; Jung, Erica E; Shemesh, Or A; Straub, Christoph; Gritton, Howard J; Romano, Michael F; Costa, Emma; Sabatini, Bernardo L; Fu, Zhanyan; Boyden, Edward S; Han, Xue | Nature | 31597963 | 2019 10 |
| Conformal Ultrathin Film Metal-Organic Framework Analogues: Characterization of Growth, Porosity, and Electronic Transport. | Lau, Jonathan; Trojniak, Ashley E; Maraugha, Macy J; VanZanten, Alyssa J; Osterbaan, Alexander J; Serino, Andrew C; Ohnsorg, Monica L; Cheung, Kevin M; Ashby, David S; Weiss, Paul S; Dunn, Bruce S; Anderson, Mary E | Chemistry of materials : a publication of the American Chemical Society | 32536746 | 2019 Nov 12 |
| Recombination drives the evolution of mutational robustness. | Singhal, Sonia; Gomez, Shawn M; Burch, Christina L | Current opinion in systems biology | 31572829 | 2019 Feb |
| Photopatterned Membranes and Chemical Gradients Enable Scalable Phenotypic Organization of Primary Human Colon Epithelial Models. | Hinman, Samuel S; Wang, Yuli; Allbritton, Nancy L | Analytical chemistry | 31692334 | 2019 12 03 |
| Photoacoustic computed tomography of human extremities. | Wray, Parker; Lin, Li; Hu, Peng; Wang, Lihong V | Journal of biomedical optics | 30784244 | 2019 02 |
| Interaction specificity of clustered protocadherins inferred from sequence covariation and structural analysis. | Nicoludis, John M; Green, Anna G; Walujkar, Sanket; May, Elizabeth J; Sotomayor, Marcos; Marks, Debora S; Gaudet, Rachelle | Proceedings of the National Academy of Sciences of the United States of America | 31431536 | 2019 09 03 |
| Systematic evasion of the restriction-modification barrier in bacteria. | Johnston, Christopher D; Cotton, Sean L; Rittling, Susan R; Starr, Jacqueline R; Borisy, Gary G; Dewhirst, Floyd E; Lemon, Katherine P | Proceedings of the National Academy of Sciences of the United States of America | 31097593 | 2019 06 04 |
| GPR146 Deficiency Protects against Hypercholesterolemia and Atherosclerosis. | Yu, Haojie; Rimbert, Antoine; Palmer, Alice E; Toyohara, Takafumi; Xia, Yulei; Xia, Fang; Ferreira, Leonardo M R; Chen, Zhifen; Chen, Tao; Loaiza, Natalia; Horwitz, Nathaniel Brooks; Kacergis, Michael C; Zhao, Liping; BIOS Consortium; Soukas, Alexander A; Kuivenhoven, Jan Albert; Kathiresan, Sekar; Cowan, Chad A | Cell | 31778654 | 2019 11 27 |
| Decreased Fecal Bacterial Diversity and Altered Microbiome in Children Colonized With Clostridium difficile. | Chen, Lea Ann; Hourigan, Suchitra K; Grigoryan, Zoya; Gao, Zhan; Clemente, Jose C; Rideout, Jai Ram; Chirumamilla, Sankar; Rabidazeh, Shervin; Saeed, Shehzad; Elson, Charles O; Oliva-Hemker, Maria; Blaser, Martin J; Sears, Cynthia L | Journal of pediatric gastroenterology and nutrition | 30540709 | 2019 04 |
| The impact of early-life sub-therapeutic antibiotic treatment (STAT) on excessive weight is robust despite transfer of intestinal microbes. | Schulfer, Anjelique F; Schluter, Jonas; Zhang, Yilong; Brown, Quincy; Pathmasiri, Wimal; McRitchie, Susan; Sumner, Susan; Li, Huilin; Xavier, Joao B; Blaser, Martin J | The ISME journal | 30651608 | 2019 05 |
| Super-resolution labelling with Action-PAINT. | Liu, Ninning; Dai, Mingjie; Saka, Sinem K; Yin, Peng | Nature chemistry | 31527848 | 2019 11 |
| Matrix Metalloproteinase Inhibition in a Murine Model of Cavitary Tuberculosis Paradoxically Worsens Pathology. | Ordonez, Alvaro A; Pokkali, Supriya; Sanchez-Bautista, Julian; Klunk, Mariah H; Urbanowski, Michael E; Kübler, André; Bishai, William R; Elkington, Paul T; Jain, Sanjay K | The Journal of infectious diseases | 29920600 | 2019 01 29 |
| Radiosynthesis and PET Bioimaging of 76Br-Bedaquiline in a Murine Model of Tuberculosis. | Ordonez, Alvaro A; Carroll, Laurence S; Abhishek, Sudhanshu; Mota, Filipa; Ruiz-Bedoya, Camilo A; Klunk, Mariah H; Singh, Alok K; Freundlich, Joel S; Mease, Ronnie C; Jain, Sanjay K | ACS infectious diseases | 31345032 | 2019 12 13 |
| Genomic Tools for Environmental Epigenetics and Implications for Public Health. | Perera, Bambarendage P U; Svoboda, Laurie; Dolinoy, Dana C | Current opinion in toxicology | 31763499 | 2019 Dec |
| Exosomes Derived from Human Primed Mesenchymal Stem Cells Induce Mitosis and Potentiate Growth Factor Secretion. | Yuan, Oliver; Lin, Clayton; Wagner, Joseph; Archard, Joehleen A; Deng, Peter; Halmai, Julian; Bauer, Gerhard; Fink, Kyle D; Fury, Brian; Perotti, Nicholas H; Walker, Jon E; Pollock, Kari; Apperson, Michelle; Butters, Janelle; Belafsky, Peter; Farwell, D Gregory; Kuhn, Maggie; Nolta, Jan; Anderson, Johnathon D | Stem cells and development | 30638129 | 2019 03 15 |
| Primed mesenchymal stem cells package exosomes with metabolites associated with immunomodulation. | Showalter, Megan R; Wancewicz, Benjamin; Fiehn, Oliver; Archard, Joehleen A; Clayton, Shannon; Wagner, Joseph; Deng, Peter; Halmai, Julian; Fink, Kyle D; Bauer, Gerhard; Fury, Brian; Perotti, Nicholas H; Apperson, Michelle; Butters, Janelle; Belafsky, Peter; Farwell, Gregory; Kuhn, Maggie; Nolta, Jan A; Anderson, Johnathon D | Biochemical and biophysical research communications | 30926165 | 2019 05 14 |
| A genetically encoded near-infrared fluorescent calcium ion indicator. | Qian, Yong; Piatkevich, Kiryl D; Mc Larney, Benedict; Abdelfattah, Ahmed S; Mehta, Sohum; Murdock, Mitchell H; Gottschalk, Sven; Molina, Rosana S; Zhang, Wei; Chen, Yingche; Wu, Jiahui; Drobizhev, Mikhail; Hughes, Thomas E; Zhang, Jin; Schreiter, Eric R; Shoham, Shy; Razansky, Daniel; Boyden, Edward S; Campbell, Robert E | Nature methods | 30664778 | 2019 02 |
| Escape From Oblivion: Neural Mechanisms of Emergence From General Anesthesia. | Kelz, Max B; García, Paul S; Mashour, George A; Solt, Ken | Anesthesia and analgesia | 30883418 | 2019 04 |
| Cognitive Impairment Is Associated with Absolute Intraoperative Frontal α-Band Power but Not with Baseline α-Band Power: A Pilot Study. | Koch, Susanne; Feinkohl, Insa; Chakravarty, Sourish; Windmann, Victoria; Lichtner, Gregor; Pischon, Tobias; Brown, Emery N; Spies, Claudia; BioCog Study Group | Dementia and geriatric cognitive disorders | 31578031 | 2019 |
| Dynamic Enhancer DNA Methylation as Basis for Transcriptional and Cellular Heterogeneity of ESCs. | Song, Yuelin; van den Berg, Patrick R; Markoulaki, Styliani; Soldner, Frank; Dall'Agnese, Alessandra; Henninger, Jonathan E; Drotar, Jesse; Rosenau, Nicholas; Cohen, Malkiel A; Young, Richard A; Semrau, Stefan; Stelzer, Yonatan; Jaenisch, Rudolf | Molecular cell | 31422875 | 2019 09 05 |
| Hachimoji DNA and RNA: A genetic system with eight building blocks. | Hoshika, Shuichi; Leal, Nicole A; Kim, Myong-Jung; Kim, Myong-Sang; Karalkar, Nilesh B; Kim, Hyo-Joong; Bates, Alison M; Watkins Jr, Norman E; SantaLucia, Holly A; Meyer, Adam J; DasGupta, Saurja; Piccirilli, Joseph A; Ellington, Andrew D; SantaLucia Jr, John; Georgiadis, Millie M; Benner, Steven A | Science (New York, N.Y.) | 30792304 | 2019 02 22 |
| Beyond protein binding: recent advances in screening DNA-encoded libraries. | Kodadek, Thomas; Paciaroni, Nicholas G; Balzarini, Madeline; Dickson, Paige | Chemical communications (Cambridge, England) | 31633708 | 2019 Nov 18 |
| Serotonin transporter-ibogaine complexes illuminate mechanisms of inhibition and transport. | Coleman, Jonathan A; Yang, Dongxue; Zhao, Zhiyu; Wen, Po-Chao; Yoshioka, Craig; Tajkhorshid, Emad; Gouaux, Eric | Nature | 31019304 | 2019 05 |
| Exact distance measurements for structure and dynamics in solid proteins by fast-magic-angle-spinning NMR. | Grohe, Kristof; Nimerovsky, Evgeny; Singh, Himanshu; Vasa, Suresh K; Söldner, Benedikt; Vögeli, Beat; Rienstra, Chad M; Linser, Rasmus | Chemical communications (Cambridge, England) | 31199417 | 2019 Jul 14 |
| Integrating hydrogen-deuterium exchange mass spectrometry with molecular dynamics simulations to probe lipid-modulated conformational changes in membrane proteins. | Martens, Chloe; Shekhar, Mrinal; Lau, Andy M; Tajkhorshid, Emad; Politis, Argyris | Nature protocols | 31605097 | 2019 11 |
| Multivalent Polymer-Peptide Conjugates-A General Platform for Inhibiting Amyloid Beta Peptide Aggregation. | Jiang, Xing; Halmes, Abigail J; Licari, Giuseppe; Smith, John W; Song, Yang; Moore, Edwin G; Chen, Qian; Tajkhorshid, Emad; Rienstra, Chad M; Moore, Jeffrey S | ACS macro letters | 32149017 | 2019 Oct 15 |
| The peculiar genetics of the ribosomal DNA blurs the boundaries of transgenerational epigenetic inheritance. | Bughio, Farah; Maggert, Keith A | Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology | 30511202 | 2019 03 |
| Monitoring of switches in heterochromatin-induced silencing shows incomplete establishment and developmental instabilities. | Bughio, Farah; Huckell, Gary R; Maggert, Keith A | Proceedings of the National Academy of Sciences of the United States of America | 31527269 | 2019 10 01 |
| Recall accuracy of weekly automated surveys of health care utilization and infectious disease symptoms among infants over the first year of life. | Ley, Catherine; Willis, Lauren; de la Luz Sanchez, Maria; Parsonnet, Julie | PloS one | 31846482 | 2019 |
| Mechanical adjuncts for cardiocerebral resuscitation. | Riess, Matthias L; Balzer, Claudius | Expert review of medical devices | 31353970 | 2019 Sep |
| A look at the increasing demographic representation within behavioral medicine. | Yoon, Sunmoo; Falzon, Louise; Anderson, Norman B; Davidson, Karina W | Journal of behavioral medicine | 30825089 | 2019 02 |
| Clinical Usefulness of Bright White Light Therapy for Depressive Symptoms in Cancer Survivors: Results from a Series of Personalized (N-of-1) Trials. | Kronish, Ian M; Cheung, Ying Kuen; Julian, Jacob; Parsons, Faith; Lee, Jenny; Yoon, Sunmoo; Valdimarsdottir, Heidis; Green, Paige; Suls, Jerry; Hershman, Dawn L; Davidson, Karina W | Healthcare (Basel, Switzerland) | 31905890 | 2019 Dec 30 |
| Chemically Inducible Chromosomal Evolution (CIChE) for Multicopy Metabolic Pathway Engineering. | Love, Aaron M; Biggs, Bradley W; Tyo, Keith E J; Ajikumar, Parayil Kumaran | Methods in molecular biology (Clifton, N.J.) | 30788784 | 2019 |
| Single-Cell CRISPR-Based Lineage Tracing in Mice. | Kalhor, Kian; Church, George M | Biochemistry | 31730337 | 2019 12 03 |
| Multispectral tracing in densely labeled mouse brain with nTracer. | Roossien, Douglas H; Sadis, Benjamin V; Yan, Yan; Webb, John M; Min, Lia Y; Dizaji, Aslan S; Bogart, Luke J; Mazuski, Cristina; Huth, Robert S; Stecher, Johanna S; Akula, Sriakhila; Shen, Fred; Li, Ye; Xiao, Tingxin; Vandenbrink, Madeleine; Lichtman, Jeff W; Hensch, Takao K; Herzog, Erik D; Cai, Dawen | Bioinformatics (Oxford, England) | 30715234 | 2019 09 15 |
| Whole-genome deep-learning analysis identifies contribution of noncoding mutations to autism risk. | Zhou, Jian; Park, Christopher Y; Theesfeld, Chandra L; Wong, Aaron K; Yuan, Yuan; Scheckel, Claudia; Fak, John J; Funk, Julien; Yao, Kevin; Tajima, Yoko; Packer, Alan; Darnell, Robert B; Troyanskaya, Olga G | Nature genetics | 31133750 | 2019 06 |
| AGO CLIP Reveals an Activated Network for Acute Regulation of Brain Glutamate Homeostasis in Ischemic Stroke. | Kobayashi, Mariko; Benakis, Corinne; Anderson, Corey; Moore, Michael J; Poon, Carrie; Uekawa, Ken; Dyke, Jonathan P; Fak, John J; Mele, Aldo; Park, Christopher Y; Zhou, Ping; Anrather, Josef; Iadecola, Costantino; Darnell, Robert B | Cell reports | 31340158 | 2019 07 23 |
| Battery-free, fully implantable optofluidic cuff system for wireless optogenetic and pharmacological neuromodulation of peripheral nerves. | Zhang, Yi; Mickle, Aaron D; Gutruf, Philipp; McIlvried, Lisa A; Guo, Hexia; Wu, Yixin; Golden, Judith P; Xue, Yeguang; Grajales-Reyes, Jose G; Wang, Xueju; Krishnan, Siddharth; Xie, Yiwen; Peng, Dongsheng; Su, Chun-Ju; Zhang, Fengyi; Reeder, Jonathan T; Vogt, Sherri K; Huang, Yonggang; Rogers, John A; Gereau 4th, Robert W | Science advances | 31281895 | 2019 07 |
| Current strategies for Site-Directed RNA Editing using ADARs. | Montiel-Gonzalez, Maria Fernanda; Diaz Quiroz, Juan Felipe; Rosenthal, Joshua J C | Methods (San Diego, Calif.) | 30502398 | 2019 03 01 |
| Visualization of long-lived proteins reveals age mosaicism within nuclei of postmitotic cells. | Toyama, Brandon H; Arrojo E Drigo, Rafael; Lev-Ram, Varda; Ramachandra, Ranjan; Deerinck, Thomas J; Lechene, Claude; Ellisman, Mark H; Hetzer, Martin W | The Journal of cell biology | 30552100 | 2019 02 04 |
| Sounds Impossible, but It's Knot. | Smith, Loren E; Heath, Dillon R; Riess, Matthias L | Anesthesiology | 30632983 | 2019 05 |
| Macrophage and Fibroblast Interactions in Biomaterial-Mediated Fibrosis. | Witherel, Claire E; Abebayehu, Daniel; Barker, Thomas H; Spiller, Kara L | Advanced healthcare materials | 30658015 | 2019 02 |
| Microfluidic synthesis and on-chip enrichment application of two-dimensional hollow sandwich-like mesoporous silica nanosheet with water ripple-like surface. | Hao, Nanjing; Nie, Yuan; Closson, Andrew B; Zhang, John X J | Journal of colloid and interface science | 30576991 | 2019 Mar 15 |
| Microfluidics-Based Organism Isolation from Whole Blood: An Emerging Tool for Bloodstream Infection Diagnosis. | Burklund, Alison; Zhang, John X J | Annals of biomedical engineering | 30980291 | 2019 Jul |
| Microfluidics-enabled rational design of ZnO micro-/nanoparticles with enhanced photocatalysis, cytotoxicity, and piezoelectric properties. | Hao, Nanjing; Xu, Zhe; Nie, Yuan; Jin, Congran; Closson, Andrew B; Zhang, Michael; Zhang, John X J | Chemical engineering journal (Lausanne, Switzerland : 1996) | 32831625 | 2019 Dec 15 |
| Species-specific maturation profiles of human, chimpanzee and bonobo neural cells. | Marchetto, Maria C; Hrvoj-Mihic, Branka; Kerman, Bilal E; Yu, Diana X; Vadodaria, Krishna C; Linker, Sara B; Narvaiza, Iñigo; Santos, Renata; Denli, Ahmet M; Mendes, Ana Pd; Oefner, Ruth; Cook, Jonathan; McHenry, Lauren; Grasmick, Jaeson M; Heard, Kelly; Fredlender, Callie; Randolph-Moore, Lynne; Kshirsagar, Rijul; Xenitopoulos, Rea; Chou, Grace; Hah, Nasun; Muotri, Alysson R; Padmanabhan, Krishnan; Semendeferi, Katerina; Gage, Fred H | eLife | 30730291 | 2019 02 07 |
| Structural basis for the promiscuous PAM recognition by Corynebacterium diphtheriae Cas9. | Hirano, Seiichi; Abudayyeh, Omar O; Gootenberg, Jonathan S; Horii, Takuro; Ishitani, Ryuichiro; Hatada, Izuho; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu | Nature communications | 31036811 | 2019 04 29 |
| RNA-guided DNA insertion with CRISPR-associated transposases. | Strecker, Jonathan; Ladha, Alim; Gardner, Zachary; Schmid-Burgk, Jonathan L; Makarova, Kira S; Koonin, Eugene V; Zhang, Feng | Science (New York, N.Y.) | 31171706 | 2019 07 05 |
| SHERLOCK: nucleic acid detection with CRISPR nucleases. | Kellner, Max J; Koob, Jeremy G; Gootenberg, Jonathan S; Abudayyeh, Omar O; Zhang, Feng | Nature protocols | 31548639 | 2019 10 |
| Imaging-based pooled CRISPR screening reveals regulators of lncRNA localization. | Wang, Chong; Lu, Tian; Emanuel, George; Babcock, Hazen P; Zhuang, Xiaowei | Proceedings of the National Academy of Sciences of the United States of America | 31085639 | 2019 May 28 |
| A BODIPY-Based Donor/Donor-Acceptor System: Towards Highly Efficient Long-Wavelength-Excitable Near-IR Polymer Dots with Narrow and Strong Absorption Features. | Chen, Lei; Chen, Dandan; Jiang, Yifei; Zhang, Jicheng; Yu, Jiangbo; DuFort, Christopher C; Hingorani, Sunil R; Zhang, Xuanjun; Wu, Changfeng; Chiu, Daniel T | Angewandte Chemie (International ed. in English) | 30912228 | 2019 05 20 |
| Dual lineage tracing shows that glomerular parietal epithelial cells can transdifferentiate toward the adult podocyte fate. | Kaverina, Natalya V; Eng, Diana G; Freedman, Benjamin S; Kutz, J Nathan; Chozinski, Tyler J; Vaughan, Joshua C; Miner, Jeffrey H; Pippin, Jeffrey W; Shankland, Stuart J | Kidney international | 31200942 | 2019 09 |
| Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH. | Eng, Chee-Huat Linus; Lawson, Michael; Zhu, Qian; Dries, Ruben; Koulena, Noushin; Takei, Yodai; Yun, Jina; Cronin, Christopher; Karp, Christoph; Yuan, Guo-Cheng; Cai, Long | Nature | 30911168 | 2019 04 |
| Severe lung disease characterized by lymphocytic bronchiolitis, alveolar ductitis, and emphysema (BADE) in industrial machine-manufacturing workers. | Cummings, Kristin J; Stanton, Marcia L; Nett, Randall J; Segal, Leopoldo N; Kreiss, Kathleen; Abraham, Jerrold L; Colby, Thomas V; Franko, Angela D; Green, Francis H Y; Sanyal, Soma; Tallaksen, Robert J; Wendland, Douglas; Bachelder, Vance D; Boylstein, Randy J; Park, Ju-Hyeong; Cox-Ganser, Jean M; Virji, M Abbas; Crawford, Judith A; Green, Brett James; LeBouf, Ryan F; Blaser, Martin J; Weissman, David N | American journal of industrial medicine | 31461179 | 2019 11 |
| Traditional and emerging technologies for washing and volume reducing blood products. | Lu, Madeleine; Lezzar, Dalia L; Vörös, Eszter; Shevkoplyas, Sergey S | Journal of blood medicine | 30655711 | 2019 |
| Improved expansion of T cells in culture when isolated with an equipment-free, high-throughput, flow-through microfluidic module versus traditional density gradient centrifugation. | Strachan, Briony C; Xia, Hui; Vörös, Eszter; Gifford, Sean C; Shevkoplyas, Sergey S | Cytotherapy | 30660490 | 2019 02 |
| Improved Prediction on Heart Transplant Rejection Using Convolutional Autoencoder and Multiple Instance Learning on Whole-Slide Imaging. | Zhu, Yuanda; Wang, May D; Tong, Li; Deshpande, Shriprasad R | ... IEEE-EMBS International Conference on Biomedical and Health Informatics. IEEE-EMBS International Conference on Biomedical and Health Informatics | 32577622 | 2019 May |
| High-throughput, label-free, single-cell photoacoustic microscopy of intratumoral metabolic heterogeneity. | Hai, Pengfei; Imai, Toru; Xu, Song; Zhang, Ruiying; Aft, Rebecca L; Zou, Jun; Wang, Lihong V | Nature biomedical engineering | 30936431 | 2019 05 |
| Focusing light inside live tissue using reversibly switchable bacterial phytochrome as a genetically encoded photochromic guide star. | Yang, Jiamiao; Li, Lei; Shemetov, Anton A; Lee, Sangjun; Zhao, Yuan; Liu, Yan; Shen, Yuecheng; Li, Jingwei; Oka, Yuki; Verkhusha, Vladislav V; Wang, Lihong V | Science advances | 31844671 | 2019 12 |
| Atlas of Subcellular RNA Localization Revealed by APEX-Seq. | Fazal, Furqan M; Han, Shuo; Parker, Kevin R; Kaewsapsak, Pornchai; Xu, Jin; Boettiger, Alistair N; Chang, Howard Y; Ting, Alice Y | Cell | 31230715 | 2019 07 11 |
| Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution. | Gao, Ruixuan; Asano, Shoh M; Upadhyayula, Srigokul; Pisarev, Igor; Milkie, Daniel E; Liu, Tsung-Li; Singh, Ved; Graves, Austin; Huynh, Grace H; Zhao, Yongxin; Bogovic, John; Colonell, Jennifer; Ott, Carolyn M; Zugates, Christopher; Tappan, Susan; Rodriguez, Alfredo; Mosaliganti, Kishore R; Sheu, Shu-Hsien; Pasolli, H Amalia; Pang, Song; Xu, C Shan; Megason, Sean G; Hess, Harald; Lippincott-Schwartz, Jennifer; Hantman, Adam; Rubin, Gerald M; Kirchhausen, Tom; Saalfeld, Stephan; Aso, Yoshinori; Boyden, Edward S; Betzig, Eric | Science (New York, N.Y.) | 30655415 | 2019 01 18 |
| Aerosol-Phase Synthesis and Processing of Luminescent Silicon Nanocrystals. | Li, Zhaohan; Kortshagen, Uwe R | Chemistry of materials : a publication of the American Chemical Society | 34163100 | 2019 Sep 19 |
| Immuno-SABER enables highly multiplexed and amplified protein imaging in tissues. | Saka, Sinem K; Wang, Yu; Kishi, Jocelyn Y; Zhu, Allen; Zeng, Yitian; Xie, Wenxin; Kirli, Koray; Yapp, Clarence; Cicconet, Marcelo; Beliveau, Brian J; Lapan, Sylvain W; Yin, Siyuan; Lin, Millicent; Boyden, Edward S; Kaeser, Pascal S; Pihan, German; Church, George M; Yin, Peng | Nature biotechnology | 31427819 | 2019 09 |
| Enhancing Retention of Human Bone Marrow Mesenchymal Stem Cells with Prosurvival Factors Promotes Angiogenesis in a Mouse Model of Limb Ischemia. | Cortez-Toledo, Elizabeth; Rose, Melanie; Agu, Emmanuel; Dahlenburg, Heather; Yao, Wei; Nolta, Jan A; Zhou, Ping | Stem cells and development | 30398391 | 2019 01 15 |
| Islands of retroelements are major components of Drosophila centromeres. | Chang, Ching-Ho; Chavan, Ankita; Palladino, Jason; Wei, Xiaolu; Martins, Nuno M C; Santinello, Bryce; Chen, Chin-Chi; Erceg, Jelena; Beliveau, Brian J; Wu, Chao-Ting; Larracuente, Amanda M; Mellone, Barbara G | PLoS biology | 31086362 | 2019 05 |
| Highly structured homolog pairing reflects functional organization of the Drosophila genome. | AlHaj Abed, Jumana; Erceg, Jelena; Goloborodko, Anton; Nguyen, Son C; McCole, Ruth B; Saylor, Wren; Fudenberg, Geoffrey; Lajoie, Bryan R; Dekker, Job; Mirny, Leonid A; Wu, C-Ting | Nature communications | 31582763 | 2019 10 03 |
| Citrullination of fibronectin alters integrin clustering and focal adhesion stability promoting stromal cell invasion. | Stefanelli, Victoria L; Choudhury, Shilpa; Hu, Ping; Liu, Yining; Schwenzer, Anja; Yeh, Chiuan-Ren; Chambers, Dwight M; von Beck, Kelly; Li, Wei; Segura, Tatiana; Midwood, Kim S; Torres, Matthew; Barker, Thomas H | Matrix biology : journal of the International Society for Matrix Biology | 31004743 | 2019 Sep |
| Microfluidics for silica biomaterials synthesis: opportunities and challenges. | Hao, Nanjing; Nie, Yuan; Zhang, John X J | Biomaterials science | 30919847 | 2019 May 28 |
| Microfluidic continuous flow synthesis of functional hollow spherical silica with hierarchical sponge-like large porous shell. | Hao, Nanjing; Nie, Yuan; Xu, Zhe; Closson, Andrew B; Usherwood, Thomas; J Zhang, John X | Chemical engineering journal (Lausanne, Switzerland : 1996) | 31762686 | 2019 Jun 15 |
| Expansion microscopy: enabling single cell analysis in intact biological systems. | Alon, Shahar; Huynh, Grace H; Boyden, Edward S | The FEBS journal | 29938896 | 2019 04 |
| Relationship Between Sleep Quality and Mood: Ecological Momentary Assessment Study. | Triantafillou, Sofia; Saeb, Sohrab; Lattie, Emily G; Mohr, David C; Kording, Konrad Paul | JMIR mental health | 30916663 | 2019 Mar 27 |
| Neuromodulator Signaling Bidirectionally Controls Vesicle Numbers in Human Synapses. | Patzke, Christopher; Brockmann, Marisa M; Dai, Jinye; Gan, Kathlyn J; Grauel, M Katharina; Fenske, Pascal; Liu, Yu; Acuna, Claudio; Rosenmund, Christian; Südhof, Thomas C | Cell | 31585084 | 2019 10 03 |
| Unexpected connections between type VI-B CRISPR-Cas systems, bacterial natural competence, ubiquitin signaling network and DNA modification through a distinct family of membrane proteins. | Makarova, Kira S; Gao, Linyi; Zhang, Feng; Koonin, Eugene V | FEMS microbiology letters | 31089700 | 2019 04 01 |
| Optical Pooled Screens in Human Cells. | Feldman, David; Singh, Avtar; Schmid-Burgk, Jonathan L; Carlson, Rebecca J; Mezger, Anja; Garrity, Anthony J; Zhang, Feng; Blainey, Paul C | Cell | 31626775 | 2019 10 17 |
| Multiplexed detection of RNA using MERFISH and branched DNA amplification. | Xia, Chenglong; Babcock, Hazen P; Moffitt, Jeffrey R; Zhuang, Xiaowei | Scientific reports | 31118500 | 2019 May 22 |
| Coaching from the sidelines: the nuclear periphery in genome regulation. | Buchwalter, Abigail; Kaneshiro, Jeanae M; Hetzer, Martin W | Nature reviews. Genetics | 30356165 | 2019 01 |
| Age Mosaicism across Multiple Scales in Adult Tissues. | Arrojo E Drigo, Rafael; Lev-Ram, Varda; Tyagi, Swati; Ramachandra, Ranjan; Deerinck, Thomas; Bushong, Eric; Phan, Sebastien; Orphan, Victoria; Lechene, Claude; Ellisman, Mark H; Hetzer, Martin W | Cell metabolism | 31178361 | 2019 08 06 |
| NMR: an essential structural tool for integrative studies of T cell development, pMHC ligand recognition and TCR mechanobiology. | Mallis, Robert J; Brazin, Kristine N; Duke-Cohan, Jonathan S; Hwang, Wonmuk; Wang, Jia-Huai; Wagner, Gerhard; Arthanari, Haribabu; Lang, Matthew J; Reinherz, Ellis L | Journal of biomolecular NMR | 30815789 | 2019 Jul |
| Simultaneous motor preparation and execution in a last-moment reach correction task. | Ames, K Cora; Ryu, Stephen I; Shenoy, Krishna V | Nature communications | 31221968 | 2019 06 20 |
| Single-molecule sequencing detection of N6-methyladenine in microbial reference materials. | McIntyre, Alexa B R; Alexander, Noah; Grigorev, Kirill; Bezdan, Daniela; Sichtig, Heike; Chiu, Charles Y; Mason, Christopher E | Nature communications | 30718479 | 2019 02 04 |
| Translating current biomedical therapies for long duration, deep space missions. | Iosim, Sonia; MacKay, Matthew; Westover, Craig; Mason, Christopher E | Precision clinical medicine | 31886035 | 2019 Dec |
| Characterization of the Sense of Agency over the Actions of Neural-machine Interface-operated Prostheses. | Schofield, Jonathon S; Shell, Courtney E; Thumser, Zachary C; Beckler, Dylan T; Nataraj, Raviraj; Marasco, Paul D | Journal of visualized experiments : JoVE | 30663709 | 2019 01 07 |
| Crossmodal congruency effect scores decrease with repeat test exposure. | Blustein, Daniel; Gill, Satinder; Wilson, Adam; Sensinger, Jon | PeerJ | 31179180 | 2019 |
| Single-cell transcriptomic evidence for dense intracortical neuropeptide networks. | Smith, Stephen J; Sümbül, Uygar; Graybuck, Lucas T; Collman, Forrest; Seshamani, Sharmishtaa; Gala, Rohan; Gliko, Olga; Elabbady, Leila; Miller, Jeremy A; Bakken, Trygve E; Rossier, Jean; Yao, Zizhen; Lein, Ed; Zeng, Hongkui; Tasic, Bosiljka; Hawrylycz, Michael | eLife | 31710287 | 2019 11 11 |
| The Gene Conundrum in Alzheimer's Disease. | Chun, Jerold | Cerebrum : the Dana forum on brain science | 32206173 | 2019 |
| Refinement of metabolite detection in cystic fibrosis sputum reveals heme correlates with lung function decline. | Glasser, Nathaniel R; Hunter, Ryan C; Liou, Theodore G; Newman, Dianne K; Mountain West CF Consortium Investigators | PloS one | 31851705 | 2019 |
| Thy-1 in Integrin Mediated Mechanotransduction. | Hu, Ping; Barker, Thomas H | Frontiers in cell and developmental biology | 30859101 | 2019 |
| Increasing the Precision of Hypertension Treatment Through Personalized Trials: a Pilot Study. | Kronish, Ian M; Cheung, Ying Kuen; Shimbo, Daichi; Julian, Jacob; Gallagher, Benjamin; Parsons, Faith; Davidson, Karina W | Journal of general internal medicine | 30859504 | 2019 06 |
| Accurate Estimation of Neural Population Dynamics without Spike Sorting. | Trautmann, Eric M; Stavisky, Sergey D; Lahiri, Subhaneil; Ames, Katherine C; Kaufman, Matthew T; O'Shea, Daniel J; Vyas, Saurabh; Sun, Xulu; Ryu, Stephen I; Ganguli, Surya; Shenoy, Krishna V | Neuron | 31171448 | 2019 07 17 |
| Epigenetic Modifications in Acute Myeloid Leukemia: Prognosis, Treatment, and Heterogeneity. | Goldman, Samantha L; Hassan, Ciaran; Khunte, Mihir; Soldatenko, Arielle; Jong, Yunji; Afshinnekoo, Ebrahim; Mason, Christopher E | Frontiers in genetics | 30881380 | 2019 |
| A wireless closed-loop system for optogenetic peripheral neuromodulation. | Mickle, Aaron D; Won, Sang Min; Noh, Kyung Nim; Yoon, Jangyeol; Meacham, Kathleen W; Xue, Yeguang; McIlvried, Lisa A; Copits, Bryan A; Samineni, Vijay K; Crawford, Kaitlyn E; Kim, Do Hoon; Srivastava, Paulome; Kim, Bong Hoon; Min, Seunghwan; Shiuan, Young; Yun, Yeojeong; Payne, Maria A; Zhang, Jianpeng; Jang, Hokyung; Li, Yuhang; Lai, H Henry; Huang, Yonggang; Park, Sung-Il; Gereau 4th, Robert W; Rogers, John A | Nature | 30602791 | 2019 01 |
| Mesenchymal stem/stromal cells genetically engineered to produce vascular endothelial growth factor for revascularization in wound healing and ischemic conditions. | Fierro, Fernando A; Magner, Nataly; Beegle, Julie; Dahlenburg, Heather; Logan White, Jeannine; Zhou, Ping; Pepper, Karen; Fury, Brian; Coleal-Bergum, Dane Philip; Bauer, Gerhard; Gruenloh, William; Annett, Geralyn; Pifer, Christy; Nolta, Jan A | Transfusion | 30383901 | 2019 02 |
| The rostromedial tegmental nucleus: a key modulator of pain and opioid analgesia. | Taylor, Norman E; Long, Hu; Pei, JunZhu; Kukutla, Phanidhar; Phero, Anthony; Hadaegh, Farnaz; Abdelnabi, Ahmed; Solt, Ken; Brenner, Gary J | Pain | 31246732 | 2019 11 |
| The genome-wide multi-layered architecture of chromosome pairing in early Drosophila embryos. | Erceg, Jelena; AlHaj Abed, Jumana; Goloborodko, Anton; Lajoie, Bryan R; Fudenberg, Geoffrey; Abdennur, Nezar; Imakaev, Maxim; McCole, Ruth B; Nguyen, Son C; Saylor, Wren; Joyce, Eric F; Senaratne, T Niroshini; Hannan, Mohammed A; Nir, Guy; Dekker, Job; Mirny, Leonid A; Wu, C-Ting | Nature communications | 31582744 | 2019 10 03 |
| Mini EXPLORER II: a prototype high-sensitivity PET/CT scanner for companion animal whole body and human brain scanning. | Lv, Yang; Lv, Xinyu; Liu, Weiping; Judenhofer, Martin S; Zwingenberger, Allison; Wisner, Erik; Berg, Eric; McKenney, Sarah; Leung, Edwin; Spencer, Benjamin A; Cherry, Simon R; Badawi, Ramsey D | Physics in medicine and biology | 30620929 | 2019 03 21 |
| Spin-Dependent Ionization of Chiral Molecular Films. | Abendroth, John M; Cheung, Kevin M; Stemer, Dominik M; El Hadri, Mohammed S; Zhao, Chuanzhen; Fullerton, Eric E; Weiss, Paul S | Journal of the American Chemical Society | 30734553 | 2019 03 06 |
| Mosaic representations of odors in the input and output layers of the mouse olfactory bulb. | Chae, Honggoo; Kepple, Daniel R; Bast, Walter G; Murthy, Venkatesh N; Koulakov, Alexei A; Albeanu, Dinu F | Nature neuroscience | 31332371 | 2019 08 |
| Loss of HDAC6 alters gut microbiota and worsens obesity. | Lieber, Arnon D; Beier, Ulf H; Xiao, Haiyan; Wilkins, Benjamin J; Jiao, Jing; Li, Xinmin S; Schugar, Rebecca C; Strauch, Christopher M; Wang, Zeneng; Brown, J Mark; Hazen, Stanley L; Bokulich, Nicholas A; Ruggles, Kelly V; Akimova, Tatiana; Hancock, Wayne W; Blaser, Martin J | FASEB journal : official publication of the Federation of American Societies for Experimental Biology | 30102568 | 2019 01 |
| Links between environment, diet, and the hunter-gatherer microbiome. | Fragiadakis, Gabriela K; Smits, Samuel A; Sonnenburg, Erica D; Van Treuren, William; Reid, Gregor; Knight, Rob; Manjurano, Alphaxard; Changalucha, John; Dominguez-Bello, Maria Gloria; Leach, Jeff; Sonnenburg, Justin L | Gut microbes | 30118385 | 2019 |
| Gut microbiome of treatment-naïve MS patients of different ethnicities early in disease course. | Ventura, R E; Iizumi, T; Battaglia, T; Liu, Menghan; Perez-Perez, G I; Herbert, J; Blaser, M J | Scientific reports | 31705027 | 2019 11 08 |
| SABER amplifies FISH: enhanced multiplexed imaging of RNA and DNA in cells and tissues. | Kishi, Jocelyn Y; Lapan, Sylvain W; Beliveau, Brian J; West, Emma R; Zhu, Allen; Sasaki, Hiroshi M; Saka, Sinem K; Wang, Yu; Cepko, Constance L; Yin, Peng | Nature methods | 31110282 | 2019 06 |
| Molecular Imaging: a Novel Tool To Visualize Pathogenesis of Infections In Situ. | Gordon, Oren; Ruiz-Bedoya, Camilo A; Ordonez, Alvaro A; Tucker, Elizabeth W; Jain, Sanjay K | mBio | 31662452 | 2019 10 29 |
| The mind-body problem: Circuits that link the cerebral cortex to the adrenal medulla. | Dum, Richard P; Levinthal, David J; Strick, Peter L | Proceedings of the National Academy of Sciences of the United States of America | 31871146 | 2019 Dec 26 |
| Shared heritability and functional enrichment across six solid cancers. | Jiang, Xia; Finucane, Hilary K; Schumacher, Fredrick R; Schmit, Stephanie L; Tyrer, Jonathan P; Han, Younghun; Michailidou, Kyriaki; Lesseur, Corina; Kuchenbaecker, Karoline B; Dennis, Joe; Conti, David V; Casey, Graham; Gaudet, Mia M; Huyghe, Jeroen R; Albanes, Demetrius; Aldrich, Melinda C; Andrew, Angeline S; Andrulis, Irene L; Anton-Culver, Hoda; Antoniou, Antonis C; Antonenkova, Natalia N; Arnold, Susanne M; Aronson, Kristan J; Arun, Banu K; Bandera, Elisa V; Barkardottir, Rosa B; Barnes, Daniel R; Batra, Jyotsna; Beckmann, Matthias W; Benitez, Javier; Benlloch, Sara; Berchuck, Andrew; Berndt, Sonja I; Bickeböller, Heike; Bien, Stephanie A; Blomqvist, Carl; Boccia, Stefania; Bogdanova, Natalia V; Bojesen, Stig E; Bolla, Manjeet K; Brauch, Hiltrud; Brenner, Hermann; Brenton, James D; Brook, Mark N; Brunet, Joan; Brunnström, Hans; Buchanan, Daniel D; Burwinkel, Barbara; Butzow, Ralf; Cadoni, Gabriella; Caldés, Trinidad; Caligo, Maria A; Campbell, Ian; Campbell, Peter T; Cancel-Tassin, Géraldine; Cannon-Albright, Lisa; Campa, Daniele; Caporaso, Neil; Carvalho, André L; Chan, Andrew T; Chang-Claude, Jenny; Chanock, Stephen J; Chen, Chu; Christiani, David C; Claes, Kathleen B M; Claessens, Frank; Clements, Judith; Collée, J Margriet; Correa, Marcia Cruz; Couch, Fergus J; Cox, Angela; Cunningham, Julie M; Cybulski, Cezary; Czene, Kamila; Daly, Mary B; deFazio, Anna; Devilee, Peter; Diez, Orland; Gago-Dominguez, Manuela; Donovan, Jenny L; Dörk, Thilo; Duell, Eric J; Dunning, Alison M; Dwek, Miriam; Eccles, Diana M; Edlund, Christopher K; Edwards, Digna R Velez; Ellberg, Carolina; Evans, D Gareth; Fasching, Peter A; Ferris, Robert L; Liloglou, Triantafillos; Figueiredo, Jane C; Fletcher, Olivia; Fortner, Renée T; Fostira, Florentia; Franceschi, Silvia; Friedman, Eitan; Gallinger, Steven J; Ganz, Patricia A; Garber, Judy; García-Sáenz, José A; Gayther, Simon A; Giles, Graham G; Godwin, Andrew K; Goldberg, Mark S; Goldgar, David E; Goode, Ellen L; Goodman, Marc T; Goodman, Gary; Grankvist, Kjell; Greene, Mark H; Gronberg, Henrik; Gronwald, Jacek; Guénel, Pascal; Håkansson, Niclas; Hall, Per; Hamann, Ute; Hamdy, Freddie C; Hamilton, Robert J; Hampe, Jochen; Haugen, Aage; Heitz, Florian; Herrero, Rolando; Hillemanns, Peter; Hoffmeister, Michael; Høgdall, Estrid; Hong, Yun-Chul; Hopper, John L; Houlston, Richard; Hulick, Peter J; Hunter, David J; Huntsman, David G; Idos, Gregory; Imyanitov, Evgeny N; Ingles, Sue Ann; Isaacs, Claudine; Jakubowska, Anna; James, Paul; Jenkins, Mark A; Johansson, Mattias; Johansson, Mikael; John, Esther M; Joshi, Amit D; Kaneva, Radka; Karlan, Beth Y; Kelemen, Linda E; Kühl, Tabea; Khaw, Kay-Tee; Khusnutdinova, Elza; Kibel, Adam S; Kiemeney, Lambertus A; Kim, Jeri; Kjaer, Susanne K; Knight, Julia A; Kogevinas, Manolis; Kote-Jarai, Zsofia; Koutros, Stella; Kristensen, Vessela N; Kupryjanczyk, Jolanta; Lacko, Martin; Lam, Stephan; Lambrechts, Diether; Landi, Maria Teresa; Lazarus, Philip; Le, Nhu D; Lee, Eunjung; Lejbkowicz, Flavio; Lenz, Heinz-Josef; Leslie, Goska; Lessel, Davor; Lester, Jenny; Levine, Douglas A; Li, Li; Li, Christopher I; Lindblom, Annika; Lindor, Noralane M; Liu, Geoffrey; Loupakis, Fotios; Lubiński, Jan; Maehle, Lovise; Maier, Christiane; Mannermaa, Arto; Marchand, Loic Le; Margolin, Sara; May, Taymaa; McGuffog, Lesley; Meindl, Alfons; Middha, Pooja; Miller, Austin; Milne, Roger L; MacInnis, Robert J; Modugno, Francesmary; Montagna, Marco; Moreno, Victor; Moysich, Kirsten B; Mucci, Lorelei; Muir, Kenneth; Mulligan, Anna Marie; Nathanson, Katherine L; Neal, David E; Ness, Andrew R; Neuhausen, Su (see original citation for additional authors) | Nature communications | 30683880 | 2019 Jan 25 |
| In vivo superresolution photoacoustic computed tomography by localization of single dyed droplets. | Zhang, Pengfei; Li, Lei; Lin, Li; Shi, Junhui; Wang, Lihong V | Light, science & applications | 30962922 | 2019 |
| A microrobotic system guided by photoacoustic computed tomography for targeted navigation in intestines in vivo. | Wu, Zhiguang; Li, Lei; Yang, Yiran; Hu, Peng; Li, Yang; Yang, So-Yoon; Wang, Lihong V; Gao, Wei | Science robotics | 32632399 | 2019 Jul 31 |
| Kidney-in-a-lymph node: A novel organogenesis assay to model human renal development and test nephron progenitor cell fates. | Francipane, Maria Giovanna; Han, Bing; Oxburgh, Leif; Sims-Lucas, Sunder; Li, Zhongwei; Lagasse, Eric | Journal of tissue engineering and regenerative medicine | 31267702 | 2019 09 |
| Implementing a Novel Quality Improvement-Based Approach to Data Quality Monitoring and Enhancement in a Multipurpose Clinical Registry. | Pratt, Jesse; Jeffers, Daniel; King, Eileen C; Kappelman, Michael D; Collins, Jennifer; Margolis, Peter; Baron, Howard; Bass, Julie A; Bassett, Mikelle D; Beasley, Genie L; Benkov, Keith J; Bornstein, Jeffrey A; Cabrera, José M; Crandall, Wallace; Dancel, Liz D; Garin-Laflam, Monica P; Grunow, John E; Hirsch, Barry Z; Hoffenberg, Edward; Israel, Esther; Jester, Traci W; Kiparissi, Fevronia; Lakhole, Arathi; Lapsia, Sameer P; Minar, Phillip; Navarro, Fernando A; Neef, Haley; Park, K T; Pashankar, Dinesh S; Patel, Ashish S; Pineiro, Victor M; Samson, Charles M; Sandberg, Kelly C; Steiner, Steven J; Strople, Jennifer A; Sudel, Boris; Sullivan, Jillian S; Suskind, David L; Uppal, Vikas; Wali, Prateek D | EGEMS (Washington, DC) | 31646151 | 2019 Sep 30 |
| Molecular transport through primary human small intestinal monolayers by culture on a collagen scaffold with a gradient of chemical cross-linking. | Speer, Jennifer E; Gunasekara, Dulan B; Wang, Yuli; Fallon, John K; Attayek, Peter J; Smith, Philip C; Sims, Christopher E; Allbritton, Nancy L | Journal of biological engineering | 31061676 | 2019 |
| Building a Thick Mucus Hydrogel Layer to Improve the Physiological Relevance of In Vitro Primary Colonic Epithelial Models. | Wang, Y; Kim, R; Sims, C E; Allbritton, N L | Cellular and molecular gastroenterology and hepatology | 31356887 | 2019 |
| Matrix Metalloproteinases in Pulmonary and Central Nervous System Tuberculosis-A Review. | Rohlwink, Ursula K; Walker, Naomi F; Ordonez, Alvaro A; Li, Yifan J; Tucker, Elizabeth W; Elkington, Paul T; Wilkinson, Robert J; Wilkinson, Katalin A | International journal of molecular sciences | 30889803 | 2019 Mar 18 |
| Herpes simplex virus 1 ICP6 impedes TNF receptor 1-induced necrosome assembly during compartmentalization to detergent-resistant membrane vesicles. | Ali, Mohammad; Roback, Linda; Mocarski, Edward S | The Journal of biological chemistry | 30504227 | 2019 01 18 |
| Caspase-8 restricts antiviral CD8 T cell hyperaccumulation. | Feng, Yanjun; Daley-Bauer, Lisa P; Roback, Linda; Guo, Hongyan; Koehler, Heather S; Potempa, Marc; Lanier, Lewis L; Mocarski, Edward S | Proceedings of the National Academy of Sciences of the United States of America | 31285326 | 2019 07 23 |
| Engineering of CRISPR-Cas12b for human genome editing. | Strecker, Jonathan; Jones, Sara; Koopal, Balwina; Schmid-Burgk, Jonathan; Zetsche, Bernd; Gao, Linyi; Makarova, Kira S; Koonin, Eugene V; Zhang, Feng | Nature communications | 30670702 | 2019 01 22 |
| High-Resolution Structure of Cas13b and Biochemical Characterization of RNA Targeting and Cleavage. | Slaymaker, Ian M; Mesa, Pablo; Kellner, Max J; Kannan, Soumya; Brignole, Edward; Koob, Jeremy; Feliciano, Patricia R; Stella, Stefano; Abudayyeh, Omar O; Gootenberg, Jonathan S; Strecker, Jonathan; Montoya, Guillermo; Zhang, Feng | Cell reports | 30917325 | 2019 03 26 |
| Nucleic Acid Detection of Plant Genes Using CRISPR-Cas13. | Abudayyeh, Omar O; Gootenberg, Jonathan S; Kellner, Max J; Zhang, Feng | The CRISPR journal | 31225754 | 2019 06 |
| Programmable Inhibition and Detection of RNA Viruses Using Cas13. | Freije, Catherine A; Myhrvold, Cameron; Boehm, Chloe K; Lin, Aaron E; Welch, Nicole L; Carter, Amber; Metsky, Hayden C; Luo, Cynthia Y; Abudayyeh, Omar O; Gootenberg, Jonathan S; Yozwiak, Nathan L; Zhang, Feng; Sabeti, Pardis C | Molecular cell | 31607545 | 2019 12 05 |
| Latent Sex Differences in Molecular Signaling That Underlies Excitatory Synaptic Potentiation in the Hippocampus. | Jain, Anant; Huang, Guang Zhe; Woolley, Catherine S | The Journal of neuroscience : the official journal of the Society for Neuroscience | 30578341 | 2019 02 27 |
| Multi-immersion open-top light-sheet microscope for high-throughput imaging of cleared tissues. | Glaser, Adam K; Reder, Nicholas P; Chen, Ye; Yin, Chengbo; Wei, Linpeng; Kang, Soyoung; Barner, Lindsey A; Xie, Weisi; McCarty, Erin F; Mao, Chenyi; Halpern, Aaron R; Stoltzfus, Caleb R; Daniels, Jonathan S; Gerner, Michael Y; Nicovich, Philip R; Vaughan, Joshua C; True, Lawrence D; Liu, Jonathan T C | Nature communications | 31273194 | 2019 07 04 |
| Multi-sensory Gamma Stimulation Ameliorates Alzheimer's-Associated Pathology and Improves Cognition. | Martorell, Anthony J; Paulson, Abigail L; Suk, Ho-Jun; Abdurrob, Fatema; Drummond, Gabrielle T; Guan, Webster; Young, Jennie Z; Kim, David Nam-Woo; Kritskiy, Oleg; Barker, Scarlett J; Mangena, Vamsi; Prince, Stephanie M; Brown, Emery N; Chung, Kwanghun; Boyden, Edward S; Singer, Annabelle C; Tsai, Li-Huei | Cell | 30879788 | 2019 04 04 |
| Structural Insights into the Lipid A Transport Pathway in MsbA. | Padayatti, Pius S; Lee, Sung Chang; Stanfield, Robyn L; Wen, Po-Chao; Tajkhorshid, Emad; Wilson, Ian A; Zhang, Qinghai | Structure (London, England : 1993) | 31130486 | 2019 07 02 |
| Biosensors Show the Pharmacokinetics of S-Ketamine in the Endoplasmic Reticulum. | Bera, Kallol; Kamajaya, Aron; Shivange, Amol V; Muthusamy, Anand K; Nichols, Aaron L; Borden, Philip M; Grant, Stephen; Jeon, Janice; Lin, Elaine; Bishara, Ishak; Chin, Theodore M; Cohen, Bruce N; Kim, Charlene H; Unger, Elizabeth K; Tian, Lin; Marvin, Jonathan S; Looger, Loren L; Lester, Henry A | Frontiers in cellular neuroscience | 31798415 | 2019 |
| The processivity factor Pol32 mediates nuclear localization of DNA polymerase delta and prevents chromosomal fragile site formation in Drosophila development. | Ji, Jingyun; Tang, Xiaona; Hu, Wen; Maggert, Keith A; Rong, Yikang S | PLoS genetics | 31100062 | 2019 05 |
| Activity-Dependent Regulation of the Proapoptotic BH3-Only Gene egl-1 in a Living Neuron Pair in Caenorhabditis elegans. | Cohn, Jesse; Dwivedi, Vivek; Valperga, Giulio; Zarate, Nicole; de Bono, Mario; Horvitz, H Robert; Pierce, Jonathan T | G3 (Bethesda, Md.) | 31519744 | 2019 11 05 |
| An automated microfluidic device for time-lapse imaging of mouse embryonic stem cells. | Laing, Adam F; Tirumala, Venkat; Hegarty, Evan; Mondal, Sudip; Zhao, Peisen; Hamilton, William B; Brickman, Joshua M; Ben-Yakar, Adela | Biomicrofluidics | 31558920 | 2019 Sep |
| Modelling diastolic dysfunction in induced pluripotent stem cell-derived cardiomyocytes from hypertrophic cardiomyopathy patients. | Wu, Haodi; Yang, Huaxiao; Rhee, June-Wha; Zhang, Joe Z; Lam, Chi Keung; Sallam, Karim; Chang, Alex C Y; Ma, Ning; Lee, Jaecheol; Zhang, Hao; Blau, Helen M; Bers, Donald M; Wu, Joseph C | European heart journal | 31219556 | 2019 12 01 |
| Targeted Drug Delivery and Image-Guided Therapy of Heterogeneous Ovarian Cancer Using HER2-Targeted Theranostic Nanoparticles. | Satpathy, Minati; Wang, Liya; Zielinski, Rafal J; Qian, Weiping; Wang, Y Andrew; Mohs, Aaron M; Kairdolf, Brad A; Ji, Xin; Capala, Jacek; Lipowska, Malgorzata; Nie, Shuming; Mao, Hui; Yang, Lily | Theranostics | 30809308 | 2019 |
| CAESNet: Convolutional AutoEncoder based Semi-supervised Network for improving multiclass classification of endomicroscopic images. | Tong, Li; Wu, Hang; Wang, May D | Journal of the American Medical Informatics Association : JAMIA | 31260038 | 2019 11 01 |
| Phase separation of ligand-activated enhancers licenses cooperative chromosomal enhancer assembly. | Nair, Sreejith J; Yang, Lu; Meluzzi, Dario; Oh, Soohwan; Yang, Feng; Friedman, Meyer J; Wang, Susan; Suter, Tom; Alshareedah, Ibraheem; Gamliel, Amir; Ma, Qi; Zhang, Jie; Hu, Yiren; Tan, Yuliang; Ohgi, Kenneth A; Jayani, Ranveer Singh; Banerjee, Priya R; Aggarwal, Aneel K; Rosenfeld, Michael G | Nature structural & molecular biology | 30833784 | 2019 03 |
| High-resolution, high-contrast mid-infrared imaging of fresh biological samples with ultraviolet-localized photoacoustic microscopy. | Shi, Junhui; Wong, Terence T W; He, Yun; Li, Lei; Zhang, Ruiying; Yung, Christopher S; Hwang, Jeeseong; Maslov, Konstantin; Wang, Lihong V | Nature photonics | 31440304 | 2019 Sep |
| Angular-spectrum modeling of focusing light inside scattering media by optical phase conjugation. | Yang, Jiamiao; Li, Jingwei; He, Sailing; Wang, Lihong V | Optica | 32025534 | 2019 Mar 20 |
| Directed Evolution of Split APEX2 Peroxidase. | Han, Yisu; Branon, Tess Caroline; Martell, Jeffrey D; Boassa, Daniela; Shechner, David; Ellisman, Mark H; Ting, Alice | ACS chemical biology | 30848125 | 2019 Apr 19 |
| Ancestral characterization of 1018 cancer cell lines highlights disparities and reveals gene expression and mutational differences. | Kessler, Michael D; Bateman, Nicholas W; Conrads, Thomas P; Maxwell, George L; Dunning Hotopp, Julie C; O'Connor, Timothy D | Cancer | 30865299 | 2019 06 15 |
| Complete Genome Sequence of wAna, the Wolbachia Endosymbiont of Drosophila ananassae. | Gasser, Mark T; Chung, Matthew; Bromley, Robin E; Nadendla, Suvarna; Dunning Hotopp, Julie C | Microbiology resource announcements | 31649084 | 2019 Oct 24 |
| Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity. | Jia, Ning; Mo, Charlie Y; Wang, Chongyuan; Eng, Edward T; Marraffini, Luciano A; Patel, Dinshaw J | Molecular cell | 30503773 | 2019 01 17 |
| Human cGAS catalytic domain has an additional DNA-binding interface that enhances enzymatic activity and liquid-phase condensation. | Xie, Wei; Lama, Lodoe; Adura, Carolina; Tomita, Daisuke; Glickman, J Fraser; Tuschl, Thomas; Patel, Dinshaw J | Proceedings of the National Academy of Sciences of the United States of America | 31142647 | 2019 06 11 |
| Chemical composition of DNA-encoded libraries, past present and future. | Dickson, Paige; Kodadek, Thomas | Organic & biomolecular chemistry | 31017595 | 2019 05 15 |
| Therapeutic Effect of Y-27632 on Tumorigenesis and Cisplatin-Induced Peripheral Sensory Loss through RhoA-NF-κB. | Zhu, Yi; Howard, George A; Pittman, Keith; Boykin, Christi; Herring, Laura E; Wilkerson, Emily M; Verbanac, Kathryn; Lu, Qun | Molecular cancer research : MCR | 31189689 | 2019 09 |
| Shaping of infant B cell receptor repertoires by environmental factors and infectious disease. | Nielsen, Sandra C A; Roskin, Krishna M; Jackson, Katherine J L; Joshi, Shilpa A; Nejad, Parastu; Lee, Ji-Yeun; Wagar, Lisa E; Pham, Tho D; Hoh, Ramona A; Nguyen, Khoa D; Tsunemoto, Hannah Y; Patel, Sonal B; Tibshirani, Robert; Ley, Catherine; Davis, Mark M; Parsonnet, Julie; Boyd, Scott D | Science translational medicine | 30814336 | 2019 02 27 |
| A multiplexed DNA FISH strategy for assessing genome architecture in Caenorhabditis elegans. | Fields, Brandon D; Nguyen, Son C; Nir, Guy; Kennedy, Scott | eLife | 31084706 | 2019 05 14 |
| Paircounting. | Nguyen, Huy Q; Lee, S Dean; Wu, C-Ting | Trends in genetics : TIG | 31521404 | 2019 11 |
| Genome wide analysis of 3' UTR sequence elements and proteins regulating mRNA stability during maternal-to-zygotic transition in zebrafish. | Vejnar, Charles E; Abdel Messih, Mario; Takacs, Carter M; Yartseva, Valeria; Oikonomou, Panos; Christiano, Romain; Stoeckius, Marlon; Lau, Stephanie; Lee, Miler T; Beaudoin, Jean-Denis; Musaev, Damir; Darwich-Codore, Hiba; Walther, Tobias C; Tavazoie, Saeed; Cifuentes, Daniel; Giraldez, Antonio J | Genome research | 31227602 | 2019 Jul |
| Advances in the automation of whole-cell patch clamp technology. | Suk, Ho-Jun; Boyden, Edward S; van Welie, Ingrid | Journal of neuroscience methods | 31336060 | 2019 10 01 |
| Specific factors in blood from young but not old mice directly promote synapse formation and NMDA-receptor recruitment. | Gan, Kathlyn J; Südhof, Thomas C | Proceedings of the National Academy of Sciences of the United States of America | 31160442 | 2019 06 18 |
| Pathological priming causes developmental gene network heterochronicity in autistic subject-derived neurons. | Schafer, Simon T; Paquola, Apua C M; Stern, Shani; Gosselin, David; Ku, Manching; Pena, Monique; Kuret, Thomas J M; Liyanage, Marvin; Mansour, Abed AlFatah; Jaeger, Baptiste N; Marchetto, Maria C; Glass, Christopher K; Mertens, Jerome; Gage, Fred H | Nature neuroscience | 30617258 | 2019 02 |
| A conserved morphogenetic mechanism for epidermal ensheathment of nociceptive sensory neurites. | Jiang, Nan; Rasmussen, Jeffrey P; Clanton, Joshua A; Rosenberg, Marci F; Luedke, Kory P; Cronan, Mark R; Parker, Edward D; Kim, Hyeon-Jin; Vaughan, Joshua C; Sagasti, Alvaro; Parrish, Jay Z | eLife | 30855229 | 2019 03 11 |
| Constitutive splicing and economies of scale in gene expression. | Ding, Fangyuan; Elowitz, Michael B | Nature structural & molecular biology | 31133700 | 2019 06 |
| Development and Application of the Metalloprotease Activity Multiplexed Bead-Based Immunoassay (MAMBI). | Ahrens, Caroline C; Chiswick, Evan L; Ravindra, Kodihalli C; Miller, Miles A; Ramseier, Julie Y; Isaacson, Keith B; Lauffenburger, Douglas A; Griffith, Linda G | Biochemistry | 31474112 | 2019 09 24 |
| Detection of Low-Abundance Metabolites in Live Cells Using an RNA Integrator. | You, Mingxu; Litke, Jacob L; Wu, Rigumula; Jaffrey, Samie R | Cell chemical biology | 30773480 | 2019 04 18 |
| Imaging Pulmonary Foreign Body Reaction Using [125I]iodo-DPA-713 SPECT/CT in Mice. | Sanchez-Bautista, Julian; Foss, Catherine A; Ordonez, Alvaro A; Klunk, Mariah H; Jain, Sanjay K | Molecular imaging and biology | 29987615 | 2019 04 |
| Radiosynthesis and validation of [Carboxy-11 C]4-Aminobenzoic acid ([11 C]PABA), a PET radiotracer for imaging bacterial infections. | Holt, Daniel P; Kalinda, Alvin S; Bambarger, Lauren E; Jain, Sanjay K; Dannals, Robert F | Journal of labelled compounds & radiopharmaceuticals | 30089334 | 2019 01 |
| Molecular imaging of bacterial infections: Overcoming the barriers to clinical translation. | Ordonez, Alvaro A; Sellmyer, Mark A; Gowrishankar, Gayatri; Ruiz-Bedoya, Camilo A; Tucker, Elizabeth W; Palestro, Christopher J; Hammoud, Dima A; Jain, Sanjay K | Science translational medicine | 31484790 | 2019 09 04 |
| Molecular Imaging of Diabetic Foot Infections: New Tools for Old Questions. | Ruiz-Bedoya, Camilo A; Gordon, Oren; Mota, Filipa; Abhishek, Sudhanshu; Tucker, Elizabeth W; Ordonez, Alvaro A; Jain, Sanjay K | International journal of molecular sciences | 31795077 | 2019 Nov 28 |
| Ultrafast microfluidic synthesis of hierarchical triangular silver core-silica shell nanoplatelet toward enhanced cellular internalization. | Hao, Nanjing; Nie, Yuan; Xu, Zhe; Zhang, John X J | Journal of colloid and interface science | 30771632 | 2019 Apr 15 |
| Direct Reprogramming of Human Neurons Identifies MARCKSL1 as a Pathogenic Mediator of Valproic Acid-Induced Teratogenicity. | Chanda, Soham; Ang, Cheen Euong; Lee, Qian Yi; Ghebrial, Michael; Haag, Daniel; Shibuya, Yohei; Wernig, Marius; Südhof, Thomas C | Cell stem cell | 31155484 | 2019 07 03 |
| Neuroligin-4 Regulates Excitatory Synaptic Transmission in Human Neurons. | Marro, Samuele G; Chanda, Soham; Yang, Nan; Janas, Justyna A; Valperga, Giulio; Trotter, Justin; Zhou, Bo; Merrill, Sean; Yousif, Issa; Shelby, Hannah; Vogel, Hannes; Kalani, M Yashar S; Südhof, Thomas C; Wernig, Marius | Neuron | 31257103 | 2019 08 21 |
| DNA Microscopy: Optics-free Spatio-genetic Imaging by a Stand-Alone Chemical Reaction. | Weinstein, Joshua A; Regev, Aviv; Zhang, Feng | Cell | 31230717 | 2019 06 27 |
| REST and Neural Gene Network Dysregulation in iPSC Models of Alzheimer's Disease. | Meyer, Katharina; Feldman, Heather M; Lu, Tao; Drake, Derek; Lim, Elaine T; Ling, King-Hwa; Bishop, Nicholas A; Pan, Ying; Seo, Jinsoo; Lin, Yuan-Ta; Su, Susan C; Church, George M; Tsai, Li-Huei; Yankner, Bruce A | Cell reports | 30699343 | 2019 01 29 |
| Glutamate spillover in C. elegans triggers repetitive behavior through presynaptic activation of MGL-2/mGluR5. | Katz, Menachem; Corson, Francis; Keil, Wolfgang; Singhal, Anupriya; Bae, Andrea; Lu, Yun; Liang, Yupu; Shaham, Shai | Nature communications | 31015396 | 2019 04 23 |
| Barriers and innovative interventions for early detection of cervical cancer. | Baezconde-Garbanati, Lourdes; Agurto, Irene; Gravitt, Patti E; Luciani, Silvana; Murphy, Sheila; Ochoa, Carol; Gallegos, Katia; Barahona, Rosa; Rodríguez, Yaneth | Salud publica de Mexico | 31430087 | 2019 Jul-Aug |
| Spectral contrast optical coherence tomography angiography enables single-scan vessel imaging. | Winkelmann, James A; Eid, Aya; Spicer, Graham; Almassalha, Luay M; Nguyen, The-Quyen; Backman, Vadim | Light, science & applications | 30651982 | 2019 |
| Quantitative quality-control metrics for in vivo oximetry in small vessels by visible light optical coherence tomography angiography. | Liu, Rongrong; Song, Weiye; Backman, Vadim; Yi, Ji | Biomedical optics express | 30800493 | 2019 Feb 01 |
| Biomaterial Scaffolds Recruit an Aggressive Population of Metastatic Tumor Cells In Vivo. | Bushnell, Grace G; Hardas, Tejaswini P; Hartfield, Rachel M; Zhang, Yining; Oakes, Robert S; Ronquist, Scott; Chen, Haiming; Rajapakse, Indika; Wicha, Max S; Jeruss, Jacqueline S; Shea, Lonnie D | Cancer research | 30808673 | 2019 04 15 |
| Engineering for Success: Approaches to Improve Chimeric Antigen Receptor T Cell Therapy for Solid Tumors. | Mata, Melinda; Gottschalk, Stephen | Drugs | 30796733 | 2019 Mar |
| Genetic Modification Strategies to Enhance CAR T Cell Persistence for Patients With Solid Tumors. | DeRenzo, Christopher; Gottschalk, Stephen | Frontiers in immunology | 30828333 | 2019 |
| T-Scan: A Genome-wide Method for the Systematic Discovery of T Cell Epitopes. | Kula, Tomasz; Dezfulian, Mohammad H; Wang, Charlotte I; Abdelfattah, Nouran S; Hartman, Zachary C; Wucherpfennig, Kai W; Lyerly, Herbert Kim; Elledge, Stephen J | Cell | 31398327 | 2019 Aug 08 |
| The gut microbiota influences skeletal muscle mass and function in mice. | Lahiri, Shawon; Kim, Hyejin; Garcia-Perez, Isabel; Reza, Musarrat Maisha; Martin, Katherine A; Kundu, Parag; Cox, Laura M; Selkrig, Joel; Posma, Joram M; Zhang, Hongbo; Padmanabhan, Parasuraman; Moret, Catherine; Gulyás, Balázs; Blaser, Martin J; Auwerx, Johan; Holmes, Elaine; Nicholson, Jeremy; Wahli, Walter; Pettersson, Sven | Science translational medicine | 31341063 | 2019 07 24 |
| Primary Cell-Derived Intestinal Models: Recapitulating Physiology. | Dutton, Johanna S; Hinman, Samuel S; Kim, Raehyun; Wang, Yuli; Allbritton, Nancy L | Trends in biotechnology | 30591184 | 2019 07 |
| An in vitro intestinal platform with a self-sustaining oxygen gradient to study the human gut/microbiome interface. | Kim, Raehyun; Attayek, Peter J; Wang, Yuli; Furtado, Kathleen L; Tamayo, Rita; Sims, Christopher E; Allbritton, Nancy L | Biofabrication | 31519008 | 2019 11 06 |
| Targeting the α4-α5 interface of RAS results in multiple levels of inhibition. | Spencer-Smith, Russell; Li, Lie; Prasad, Sheela; Koide, Akiko; Koide, Shohei; O'Bryan, John P | Small GTPases | 28692342 | 2019 09 |
| Laughter and the Chair: Social Pressures Influencing Scoring During Grant Peer Review Meetings. | Pier, Elizabeth L; Raclaw, Joshua; Carnes, Molly; Ford, Cecilia E; Kaatz, Anna | Journal of general internal medicine | 30604119 | 2019 04 |
| Little race or gender bias in an experiment of initial review of NIH R01 grant proposals. | Forscher, Patrick S; Cox, William T L; Brauer, Markus; Devine, Patricia G | Nature human behaviour | 30953009 | 2019 03 |
| Disruption of the ascending arousal network in acute traumatic disorders of consciousness. | Snider, Samuel B; Bodien, Yelena G; Bianciardi, Marta; Brown, Emery N; Wu, Ona; Edlow, Brian L | Neurology | 31484715 | 2019 09 24 |
| Global identification of functional microRNA-mRNA interactions in Drosophila. | Wessels, Hans-Hermann; Lebedeva, Svetlana; Hirsekorn, Antje; Wurmus, Ricardo; Akalin, Altuna; Mukherjee, Neelanjan; Ohler, Uwe | Nature communications | 30967537 | 2019 04 09 |
| Learning the pattern of epistasis linking genotype and phenotype in a protein. | Poelwijk, Frank J; Socolich, Michael; Ranganathan, Rama | Nature communications | 31527666 | 2019 Sep 16 |
| Bioactive Peptide Brush Polymers via Photoinduced Reversible-Deactivation Radical Polymerization. | Sun, Hao; Choi, Wonmin; Zang, Nanzhi; Battistella, Claudia; Thompson, Matthew P; Cao, Wei; Zhou, Xuhao; Forman, Christopher; Gianneschi, Nathan C | Angewandte Chemie (International ed. in English) | 31595626 | 2019 11 25 |
| Wireless resonant circuits for the minimally invasive sensing of biophysical processes in magnetic resonance imaging. | Hai, Aviad; Spanoudaki, Virginia Ch; Bartelle, Benjamin B; Jasanoff, Alan | Nature biomedical engineering | 30932065 | 2019 01 |
| The Impact of Heterogeneity on Single-Cell Sequencing. | Goldman, Samantha L; MacKay, Matthew; Afshinnekoo, Ebrahim; Melnick, Ari M; Wu, Shuxiu; Mason, Christopher E | Frontiers in genetics | 30881372 | 2019 |
| Developmental Rewiring between Cerebellar Climbing Fibers and Purkinje Cells Begins with Positive Feedback Synapse Addition. | Wilson, Alyssa Michelle; Schalek, Richard; Suissa-Peleg, Adi; Jones, Thouis R; Knowles-Barley, Seymour; Pfister, Hanspeter; Lichtman, Jeff William | Cell reports | 31775050 | 2019 11 26 |
| Differential NOVA2-Mediated Splicing in Excitatory and Inhibitory Neurons Regulates Cortical Development and Cerebellar Function. | Saito, Yuhki; Yuan, Yuan; Zucker-Scharff, Ilana; Fak, John J; Jereb, Saša; Tajima, Yoko; Licatalosi, Donny D; Darnell, Robert B | Neuron | 30638744 | 2019 02 20 |
| FMRP has a cell-type-specific role in CA1 pyramidal neurons to regulate autism-related transcripts and circadian memory. | Sawicka, Kirsty; Hale, Caryn R; Park, Christopher Y; Fak, John J; Gresack, Jodi E; Van Driesche, Sarah J; Kang, Jin Joo; Darnell, Jennifer C; Darnell, Robert B | eLife | 31860442 | 2019 12 20 |
| Multifaceted Changes in Synaptic Composition and Astrocytic Involvement in a Mouse Model of Fragile X Syndrome. | Simhal, Anish K; Zuo, Yi; Perez, Marc M; Madison, Daniel V; Sapiro, Guillermo; Micheva, Kristina D | Scientific reports | 31554841 | 2019 09 25 |
| Assessment of SIRT2 Inhibitors in Mouse Models of Cancer. | Negrón Abril, Yashira L; Fernández, Irma; Weiss, Robert S | Methods in molecular biology (Clifton, N.J.) | 31087297 | 2019 |
| Dual-polarization analog optical phase conjugation for focusing light through scattering media. | Cheng, Zhongtao; Yang, Jiamiao; Wang, Lihong V | Applied physics letters | 31312071 | 2019 Jun 10 |
| Proximity labeling of protein complexes and cell-type-specific organellar proteomes in Arabidopsis enabled by TurboID. | Mair, Andrea; Xu, Shou-Ling; Branon, Tess C; Ting, Alice Y; Bergmann, Dominique C | eLife | 31535972 | 2019 09 19 |
| TwinBLAST: When Two Is Better than One. | Dunning Hotopp, Julie C; Matsumura, James; Bromley, Robin E; Riley, David R; Agrawal, Sonia; Sparklin, Ben; Mattick, John; Crabtree, Jonathan; Mahurkar, Anup | Microbiology resource announcements | 31467106 | 2019 Aug 29 |
| A Pungent and Painful Toxin. | Green, Dustin; Dong, Xinzhong | Cell | 31474364 | 2019 Sep 05 |
| SPECT/CT Imaging of Mycobacterium tuberculosis Infection with [125I]anti-C3d mAb. | Foss, Catherine A; Kulik, Liudmila; Ordonez, Alvaro A; Jain, Sanjay K; Michael Holers, V; Thurman, Joshua M; Pomper, Martin G | Molecular imaging and biology | 29998399 | 2019 06 |
| Delamanid Central Nervous System Pharmacokinetics in Tuberculous Meningitis in Rabbits and Humans. | Tucker, Elizabeth W; Pieterse, Lisa; Zimmerman, Matthew D; Udwadia, Zarir F; Peloquin, Charles A; Gler, Maria Tarcela; Ganatra, Shashank; Tornheim, Jeffrey A; Chawla, Prerna; Caoili, Janice C; Ritchie, Brittaney; Jain, Sanjay K; Dartois, Véronique; Dooley, Kelly E | Antimicrobial agents and chemotherapy | 31383662 | 2019 10 |
| A meta-analysis of procedures to change implicit measures. | Forscher, Patrick S; Lai, Calvin K; Axt, Jordan R; Ebersole, Charles R; Herman, Michelle; Devine, Patricia G; Nosek, Brian A | Journal of personality and social psychology | 31192631 | 2019 Sep |
| Neuroligin-1 Signaling Controls LTP and NMDA Receptors by Distinct Molecular Pathways. | Wu, Xiaoting; Morishita, Wade K; Riley, Ashley M; Hale, William D; Südhof, Thomas C; Malenka, Robert C | Neuron | 30871858 | 2019 May 08 |
| On Functions Computed on Trees. | Farhoodi, Roozbeh; Filom, Khashayar; Jones, Ilenna Simone; Kording, Konrad Paul | Neural computation | 31525312 | 2019 11 |
| The role of adult hippocampal neurogenesis in brain health and disease. | Toda, Tomohisa; Parylak, Sarah L; Linker, Sara B; Gage, Fred H | Molecular psychiatry | 29679070 | 2019 01 |
| Mitochondria, Metabolism, and Redox Mechanisms in Psychiatric Disorders. | Kim, Yeni; Vadodaria, Krishna C; Lenkei, Zsolt; Kato, Tadafumi; Gage, Fred H; Marchetto, Maria C; Santos, Renata | Antioxidants & redox signaling | 30585734 | 2019 08 01 |
| Two eARCHT3.0 Lines for Optogenetic Silencing of Dopaminergic and Serotonergic Neurons. | Krol, Alexandra; Lopez-Huerta, Violeta G; Corey, Taylor E C; Deisseroth, Karl; Ting, Jonathan T; Feng, Guoping | Frontiers in neural circuits | 30774584 | 2019 |
| Using enhanced number and brightness to measure protein oligomerization dynamics in live cells. | Cutrale, Francesco; Rodriguez, Daniel; Hortigüela, Verónica; Chiu, Chi-Li; Otterstrom, Jason; Mieruszynski, Stephen; Seriola, Anna; Larrañaga, Enara; Raya, Angel; Lakadamyali, Melike; Fraser, Scott E; Martinez, Elena; Ojosnegros, Samuel | Nature protocols | 30675035 | 2019 02 |
| A cytosine deaminase for programmable single-base RNA editing. | Abudayyeh, Omar O; Gootenberg, Jonathan S; Franklin, Brian; Koob, Jeremy; Kellner, Max J; Ladha, Alim; Joung, Julia; Kirchgatterer, Paul; Cox, David B T; Zhang, Feng | Science (New York, N.Y.) | 31296651 | 2019 07 26 |
| Spatial transcriptome profiling by MERFISH reveals subcellular RNA compartmentalization and cell cycle-dependent gene expression. | Xia, Chenglong; Fan, Jean; Emanuel, George; Hao, Junjie; Zhuang, Xiaowei | Proceedings of the National Academy of Sciences of the United States of America | 31501331 | 2019 Sep 24 |
| Regulation of lifespan by neural excitation and REST. | Zullo, Joseph M; Drake, Derek; Aron, Liviu; O'Hern, Patrick; Dhamne, Sameer C; Davidsohn, Noah; Mao, Chai-An; Klein, William H; Rotenberg, Alexander; Bennett, David A; Church, George M; Colaiácovo, Monica P; Yankner, Bruce A | Nature | 31619788 | 2019 10 |
| Structure and variability of delay activity in premotor cortex. | Even-Chen, Nir; Sheffer, Blue; Vyas, Saurabh; Ryu, Stephen I; Shenoy, Krishna V | PLoS computational biology | 30794541 | 2019 02 |
| High-Throughput Mapping of Long-Range Neuronal Projection Using In Situ Sequencing. | Chen, Xiaoyin; Sun, Yu-Chi; Zhan, Huiqing; Kebschull, Justus M; Fischer, Stephan; Matho, Katherine; Huang, Z Josh; Gillis, Jesse; Zador, Anthony M | Cell | 31626774 | 2019 10 17 |
| Enzyme-responsive progelator cyclic peptides for minimally invasive delivery to the heart post-myocardial infarction. | Carlini, Andrea S; Gaetani, Roberto; Braden, Rebecca L; Luo, Colin; Christman, Karen L; Gianneschi, Nathan C | Nature communications | 30988291 | 2019 04 15 |
| UV-responsive cyclic peptide progelator bioinks. | Carlini, Andrea S; Touve, Mollie A; Fernández-Caro, Héctor; Thompson, Matthew P; Cassidy, Mary F; Cao, Wei; Gianneschi, Nathan C | Faraday discussions | 31549115 | 2019 10 30 |
| The dormancy-specific regulator, SutA, is intrinsically disordered and modulates transcription initiation in Pseudomonas aeruginosa. | Bergkessel, Megan; Babin, Brett M; VanderVelde, David; Sweredoski, Michael J; Moradian, Annie; Eggleston-Rangel, Roxana; Hess, Sonja; Tirrell, David A; Artsimovitch, Irina; Newman, Dianne K | Molecular microbiology | 31254296 | 2019 09 |
| Vibration-Energy-Harvesting System: Transduction Mechanisms, Frequency Tuning Techniques, and Biomechanical Applications. | Dong, Lin; Closson, Andrew B; Jin, Congran; Trase, Ian; Chen, Zi; Zhang, John X J | Advanced materials technologies | 33829079 | 2019 Oct |
| The Genomic Landscape of Centromeres in Cancers. | Saha, Anjan K; Mourad, Mohamad; Kaplan, Mark H; Chefetz, Ilana; Malek, Sami N; Buckanovich, Ronald; Markovitz, David M; Contreras-Galindo, Rafael | Scientific reports | 31375789 | 2019 08 02 |
| Synthesis of PEG-grafted boron doped Si nanocrystals. | Greenhagen, Jesse R; Andaraarachchi, Himashi P; Li, Zhaohan; Kortshagen, Uwe R | The Journal of chemical physics | 31822090 | 2019 Dec 07 |
| Phenylalanine Monitoring via Aptamer-Field-Effect Transistor Sensors. | Cheung, Kevin M; Yang, Kyung-Ae; Nakatsuka, Nako; Zhao, Chuanzhen; Ye, Mao; Jung, Michael E; Yang, Hongyan; Weiss, Paul S; Stojanović, Milan N; Andrews, Anne M | ACS sensors | 31631652 | 2019 Dec 27 |
| Comparative prevalence of Oxalobacter formigenes in three human populations. | PeBenito, Amanda; Nazzal, Lama; Wang, Chan; Li, Huilin; Jay, Melanie; Noya-Alarcon, Oscar; Contreras, Monica; Lander, Orlana; Leach, Jeff; Dominguez-Bello, Maria Gloria; Blaser, Martin J | Scientific reports | 30679485 | 2019 01 24 |
| Helicobacter pylori lipids can form ordered membrane domains (rafts). | Huang, Zhen; Zhang, Xue-Song; Blaser, Martin J; London, Erwin | Biochimica et biophysica acta. Biomembranes | 31449801 | 2019 11 01 |
| Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data. | Davis, Nicole M; Proctor, Diana M; Holmes, Susan P; Relman, David A; Callahan, Benjamin J | Microbiome | 30558668 | 2018 12 17 |
| Molecular and Structural Traits of Insulin Receptor Substrate 1/LC3 Nuclear Structures and Their Role in Autophagy Control and Tumor Cell Survival. | Lassak, Adam; Dean, Mathew; Wyczechowska, Dorota; Wilk, Anna; Marrero, Luis; Trillo-Tinoco, Jimena; Boulares, A Hamid; Sarkaria, Jann N; Del Valle, Luis; Peruzzi, Francesca; Ochoa, Augusto; Reiss, Krzysztof | Molecular and cellular biology | 29483302 | 2018 05 15 |
| Small-Molecule Patterning via Prefunctionalized Alkanethiols. | Cao, Huan H; Nakatsuka, Nako; Deshayes, Stephanie; Abendroth, John M; Yang, Hongyan; Weiss, Paul S; Kasko, Andrea M; Andrews, Anne M | Chemistry of materials : a publication of the American Chemical Society | 30828130 | 2018 Jun 26 |
| Nonsteroidal Anti-Inflammatory Drug-Induced Leaky Gut Modeled Using Polarized Monolayers of Primary Human Intestinal Epithelial Cells. | Bhatt, Aadra P; Gunasekara, Dulan B; Speer, Jennifer; Reed, Mark I; Peña, Alexis N; Midkiff, Bentley R; Magness, Scott T; Bultman, Scott J; Allbritton, Nancy L; Redinbo, Matthew R | ACS infectious diseases | 29094594 | 2018 01 12 |
| A High-Throughput Organoid Microinjection Platform to Study Gastrointestinal Microbiota and Luminal Physiology. | Williamson, Ian A; Arnold, Jason W; Samsa, Leigh Ann; Gaynor, Liam; DiSalvo, Matthew; Cocchiaro, Jordan L; Carroll, Ian; Azcarate-Peril, M Andrea; Rawls, John F; Allbritton, Nancy L; Magness, Scott T | Cellular and molecular gastroenterology and hepatology | 30123820 | 2018 |
| Embryonic stem cell secreted factors decrease invasiveness of triple-negative breast cancer cells through regulome modulation. | Tarasewicz, Elizabeth; Oakes, Robert S; Aviles, Misael O; Straehla, Joelle; Chilton, Kathryn M; Decker, Joseph T; Wu, Jia; Shea, Lonnie D; Jeruss, Jacqueline S | Cancer biology & therapy | 29053396 | 2018 04 03 |
| Biomaterial Scaffolds as Pre-metastatic Niche Mimics Systemically Alter the Primary Tumor and Tumor Microenvironment. | Aguado, Brian A; Hartfield, Rachel M; Bushnell, Grace G; Decker, Joseph T; Azarin, Samira M; Nanavati, Dhaval; Schipma, Matthew J; Rao, Shreyas S; Oakes, Robert S; Zhang, Yining; Jeruss, Jacqueline S; Shea, Lonnie D | Advanced healthcare materials | 29521008 | 2018 05 |
| Dynamic microRNA activity identifies therapeutic targets in trastuzumab-resistant HER2+ breast cancer. | Decker, Joseph T; Hall, Matthew S; Blaisdell, Rachel B; Schwark, Kallen; Jeruss, Jacqueline S; Shea, Lonnie D | Biotechnology and bioengineering | 29981261 | 2018 10 |
| Label free localization of nanoparticles in live cancer cells using spectroscopic microscopy. | Spicer, Graham L C; Almassalha, Luay; Martinez, Ignacio A; Ellis, Ronald; Chandler, John E; Gladstein, Scott; Zhang, Di; Nguyen, The-Quyen; Feder, Seth; Subramanian, Hariharan; de la Rica, Roberto; Thompson, Sebastian A; Backman, Vadim | Nanoscale | 30298892 | 2018 Oct 18 |
| A major chromatin regulator determines resistance of tumor cells to T cell-mediated killing. | Pan, Deng; Kobayashi, Aya; Jiang, Peng; Ferrari de Andrade, Lucas; Tay, Rong En; Luoma, Adrienne M; Tsoucas, Daphne; Qiu, Xintao; Lim, Klothilda; Rao, Prakash; Long, Henry W; Yuan, Guo-Cheng; Doench, John; Brown, Myles; Liu, X Shirley; Wucherpfennig, Kai W | Science (New York, N.Y.) | 29301958 | 2018 02 16 |
| Dismissal of RNA Polymerase II Underlies a Large Ligand-Induced Enhancer Decommissioning Program. | Tan, Yuliang; Jin, Chunyu; Ma, Wubin; Hu, Yiren; Tanasa, Bogdan; Oh, Soohwan; Gamliel, Amir; Ma, Qi; Yao, Lu; Zhang, Jie; Ohgi, Kenny; Liu, Wen; Aggarwal, Aneel K; Rosenfeld, Michael G | Molecular cell | 30118678 | 2018 Aug 16 |
| Single-breath-hold photoacoustic computed tomography of the breast. | Lin, Li; Hu, Peng; Shi, Junhui; Appleton, Catherine M; Maslov, Konstantin; Li, Lei; Zhang, Ruiying; Wang, Lihong V | Nature communications | 29907740 | 2018 Jun 15 |
| In vivo characterization of connective tissue remodeling using infrared photoacoustic spectra. | Qu, Yuan; Hu, Peng; Shi, Junhui; Maslov, Konstantin; Zhao, Peinan; Li, Chiye; Ma, Jun; Garcia-Uribe, Alejandro; Meyers, Karen; Diveley, Emily; Pizzella, Stephanie; Muench, Lisa; Punyamurthy, Nina; Goldstein, Naomi; Onwumere, Oji; Alisio, Mariana; Meyenburg, Kaytelyn; Maynard, Jennifer; Helm, Kristi; Altieri, Emma; Slaughter, Janessia; Barber, Sabrina; Burger, Tracy; Kramer, Christine; Chubiz, Jessica; Anderson, Monica; McCarthy, Ronald; England, Sarah K; Macones, George A; Stout, Molly J; Tuuli, Methodius; Wang, Lihong V | Journal of biomedical optics | 30520275 | 2018 12 |
| Transvaginal fast-scanning optical-resolution photoacoustic endoscopy. | Qu, Yuan; Li, Chiye; Shi, Junhui; Chen, Ruimin; Xu, Song; Rafsanjani, Hasan; Maslov, Konstantin; Krigman, Hannah; Garvey, Laura; Hu, Peng; Zhao, Peinan; Meyers, Karen; Diveley, Emily; Pizzella, Stephanie; Muench, Lisa; Punyamurthy, Nina; Goldstein, Naomi; Onwumere, Oji; Alisio, Mariana; Meyenburg, Kaytelyn; Maynard, Jennifer; Helm, Kristi; Slaughter, Janessia; Barber, Sabrina; Burger, Tracy; Kramer, Christine; Chubiz, Jessica; Anderson, Monica; McCarthy, Ronald; England, Sarah K; Macones, George A; Zhou, Qifa; Shung, K Kirk; Zou, Jun; Stout, Molly J; Tuuli, Methodius; Wang, Lihong V | Journal of biomedical optics | 30520276 | 2018 12 |
| Single-shot ultrafast optical imaging. | Liang, Jinyang; Wang, Lihong V | Optica | 30820445 | 2018 Sep 20 |
| Single-shot real-time femtosecond imaging of temporal focusing. | Liang, Jinyang; Zhu, Liren; Wang, Lihong V | Light, science & applications | 30839588 | 2018 |
| Theoretical study of the benefit of long axial field-of-view PET on region of interest quantification. | Zhang, Xuezhu; Badawi, Ramsey D; Cherry, Simon R; Qi, Jinyi | Physics in medicine and biology | 29799814 | 2018 Jun 27 |
| The Complexities and Nuances of Analyzing the Genome of Drosophila ananassae and Its Wolbachia Endosymbiont. | Dunning Hotopp, Julie C; Klasson, Lisa | G3 (Bethesda, Md.) | 29301977 | 2018 01 04 |
| Pan-Genotype Hepatitis E Virus Replication in Stem Cell-Derived Hepatocellular Systems. | Wu, Xianfang; Dao Thi, Viet Loan; Liu, Peng; Takacs, Constantin N; Xiang, Kuanhui; Andrus, Linda; Gouttenoire, Jérôme; Moradpour, Darius; Rice, Charles M | Gastroenterology | 29277559 | 2018 Feb |
| Fecal microbiota and bile acid interactions with systemic and adipose tissue metabolism in diet-induced weight loss of obese postmenopausal women. | Alemán, José O; Bokulich, Nicholas A; Swann, Jonathan R; Walker, Jeanne M; De Rosa, Joel Correa; Battaglia, Thomas; Costabile, Adele; Pechlivanis, Alexandros; Liang, Yupu; Breslow, Jan L; Blaser, Martin J; Holt, Peter R | Journal of translational medicine | 30176893 | 2018 Sep 03 |
| Chemoproteomics of matrix metalloproteases in a model of cartilage degeneration suggests functional biomarkers associated with posttraumatic osteoarthritis. | Ravindra, Kodihalli C; Ahrens, Caroline C; Wang, Yang; Ramseier, Julie Y; Wishnok, John S; Griffith, Linda G; Grodzinsky, Alan J; Tannenbaum, Steven R | The Journal of biological chemistry | 29794029 | 2018 07 20 |
| Programmable autonomous synthesis of single-stranded DNA. | Kishi, Jocelyn Y; Schaus, Thomas E; Gopalkrishnan, Nikhil; Xuan, Feng; Yin, Peng | Nature chemistry | 29359755 | 2018 Feb |
| Positron Emission Tomography Imaging with 2-[18F]F- p-Aminobenzoic Acid Detects Staphylococcus aureus Infections and Monitors Drug Response. | Zhang, Zhuo; Ordonez, Alvaro A; Wang, Hui; Li, Yong; Gogarty, Kayla R; Weinstein, Edward A; Daryaee, Fereidoon; Merino, Jonathan; Yoon, Grace E; Kalinda, Alvin S; Mease, Ronnie C; Iuliano, James N; Smith-Jones, Peter M; Jain, Sanjay K; Tonge, Peter J | ACS infectious diseases | 30067329 | 2018 11 09 |
| In-cell production of a genetically-encoded library based on the θ-defensin RTD-1 using a bacterial expression system. | Bi, Tao; Li, Yilong; Shekhtman, Alexander; Camarero, Julio A | Bioorganic & medicinal chemistry | 28927803 | 2018 Mar 15 |
| 2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. | Choi, Junhong; Indrisiunaite, Gabriele; DeMirci, Hasan; Ieong, Ka-Weng; Wang, Jinfan; Petrov, Alexey; Prabhakar, Arjun; Rechavi, Gideon; Dominissini, Dan; He, Chuan; Ehrenberg, Måns; Puglisi, Joseph D | Nature structural & molecular biology | 29459784 | 2018 Mar |
| Dexmedetomidine promotes biomimetic non-rapid eye movement stage 3 sleep in humans: A pilot study. | Akeju, Oluwaseun; Hobbs, Lauren E; Gao, Lei; Burns, Sara M; Pavone, Kara J; Plummer, George S; Walsh, Elisa C; Houle, Tim T; Kim, Seong-Eun; Bianchi, Matt T; Ellenbogen, Jeffrey M; Brown, Emery N | Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology | 29154132 | 2018 Jan |
| Multi-neuron intracellular recording in vivo via interacting autopatching robots. | Kodandaramaiah, Suhasa B; Flores, Francisco J; Holst, Gregory L; Singer, Annabelle C; Han, Xue; Brown, Emery N; Boyden, Edward S; Forest, Craig R | eLife | 29297466 | 2018 01 03 |
| Left-Lateralized Contributions of Saccades to Cortical Activity During a One-Back Word Recognition Task. | Chang, Yu-Cherng C; Khan, Sheraz; Taulu, Samu; Kuperberg, Gina; Brown, Emery N; Hämäläinen, Matti S; Temereanca, Simona | Frontiers in neural circuits | 29867372 | 2018 |
| Real-Time Readout of Large-Scale Unsorted Neural Ensemble Place Codes. | Hu, Sile; Ciliberti, Davide; Grosmark, Andres D; Michon, Frédéric; Ji, Daoyun; Penagos, Hector; Buzsáki, György; Wilson, Matthew A; Kloosterman, Fabian; Chen, Zhe | Cell reports | 30517852 | 2018 12 04 |
| A DNA nanorobot functions as a cancer therapeutic in response to a molecular trigger in vivo. | Li, Suping; Jiang, Qiao; Liu, Shaoli; Zhang, Yinlong; Tian, Yanhua; Song, Chen; Wang, Jing; Zou, Yiguo; Anderson, Gregory J; Han, Jing-Yan; Chang, Yung; Liu, Yan; Zhang, Chen; Chen, Liang; Zhou, Guangbiao; Nie, Guangjun; Yan, Hao; Ding, Baoquan; Zhao, Yuliang | Nature biotechnology | 29431737 | 2018 03 |
| DNA origami nanostructures can exhibit preferential renal uptake and alleviate acute kidney injury. | Jiang, Dawei; Ge, Zhilei; Im, Hyung-Jun; England, Christopher G; Ni, Dalong; Hou, Junjun; Zhang, Luhao; Kutyreff, Christopher J; Yan, Yongjun; Liu, Yan; Cho, Steve Y; Engle, Jonathan W; Shi, Jiye; Huang, Peng; Fan, Chunhai; Yan, Hao; Cai, Weibo | Nature biomedical engineering | 30505626 | 2018 Nov |
| Low agreement among reviewers evaluating the same NIH grant applications. | Pier, Elizabeth L; Brauer, Markus; Filut, Amarette; Kaatz, Anna; Raclaw, Joshua; Nathan, Mitchell J; Ford, Cecilia E; Carnes, Molly | Proceedings of the National Academy of Sciences of the United States of America | 29507248 | 2018 Mar 20 |
| Ultraconserved Elements Occupy Specific Arenas of Three-Dimensional Mammalian Genome Organization. | McCole, Ruth B; Erceg, Jelena; Saylor, Wren; Wu, Chao-Ting | Cell reports | 29996107 | 2018 07 10 |
| Centrifugation-free washing: A novel approach for removing immunoglobulin A from stored red blood cells. | Vörös, Eszter; Piety, Nathaniel Z; Strachan, Briony C; Lu, Madeleine; Shevkoplyas, Sergey S | American journal of hematology | 29285804 | 2018 Aug |
| Centrifugation-free washing reduces buildup of potassium and free hemoglobin in washed red blood cells after the procedure. | Vörös, Eszter; Lu, Madeleine; Lezzar, Dalia; Shevkoplyas, Sergey S | American journal of hematology | 30184257 | 2018 12 |
| Personalized (N-of-1) Trials for Depression: A Systematic Review. | Kronish, Ian M; Hampsey, Meghan; Falzon, Louise; Konrad, Beatrice; Davidson, Karina W | Journal of clinical psychopharmacology | 29596148 | 2018 Jun |
| High-resolution mapping of DNA polymerase fidelity using nucleotide imbalances and next-generation sequencing. | de Paz, Alexandra M; Cybulski, Thaddeus R; Marblestone, Adam H; Zamft, Bradley M; Church, George M; Boyden, Edward S; Kording, Konrad P; Tyo, Keith E J | Nucleic acids research | 29718339 | 2018 07 27 |
| Unsupervised Discovery of Demixed, Low-Dimensional Neural Dynamics across Multiple Timescales through Tensor Component Analysis. | Williams, Alex H; Kim, Tony Hyun; Wang, Forea; Vyas, Saurabh; Ryu, Stephen I; Shenoy, Krishna V; Schnitzer, Mark; Kolda, Tamara G; Ganguli, Surya | Neuron | 29887338 | 2018 06 27 |
| Brain-machine interface cursor position only weakly affects monkey and human motor cortical activity in the absence of arm movements. | Stavisky, Sergey D; Kao, Jonathan C; Nuyujukian, Paul; Pandarinath, Chethan; Blabe, Christine; Ryu, Stephen I; Hochberg, Leigh R; Henderson, Jaimie M; Shenoy, Krishna V | Scientific reports | 30397281 | 2018 11 05 |
| The Microbe Directory: An annotated, searchable inventory of microbes' characteristics. | Shaaban, Heba; Westfall, David A; Mohammad, Rawhi; Danko, David; Bezdan, Daniela; Afshinnekoo, Ebrahim; Segata, Nicola; Mason, Christopher E | Gates open research | 29630066 | 2018 Jan 05 |
| Methods for Mapping Neuronal Activity to Synaptic Connectivity: Lessons From Larval Zebrafish. | Wanner, Adrian A; Vishwanathan, Ashwin | Frontiers in neural circuits | 30410437 | 2018 |
| A Computational Synaptic Antibody Characterization Tool for Array Tomography. | Simhal, Anish K; Gong, Belvin; Trimmer, James S; Weinberg, Richard J; Smith, Stephen J; Sapiro, Guillermo; Micheva, Kristina D | Frontiers in neuroanatomy | 30065633 | 2018 |
| Antibody validation: a view from the mountains. | Taussig, Michael J; Fonseca, Cláudia; Trimmer, James S | New biotechnology | 30086383 | 2018 Oct 25 |
| Label-free prediction of three-dimensional fluorescence images from transmitted-light microscopy. | Ounkomol, Chawin; Seshamani, Sharmishtaa; Maleckar, Mary M; Collman, Forrest; Johnson, Gregory R | Nature methods | 30224672 | 2018 Nov |
| Distinctive Structural and Molecular Features of Myelinated Inhibitory Axons in Human Neocortex. | Micheva, Kristina D; Chang, Edward F; Nana, Alissa L; Seeley, William W; Ting, Jonathan T; Cobbs, Charles; Lein, Ed; Smith, Stephen J; Weinberg, Richard J; Madison, Daniel V | eNeuro | 30406183 | 2018 Sep-Oct |
| Advances in liquid biopsy on-chip for cancer management: Technologies, biomarkers, and clinical analysis. | Tadimety, Amogha; Closson, Andrew; Li, Cathy; Yi, Song; Shen, Ting; Zhang, John X J | Critical reviews in clinical laboratory sciences | 29388456 | 2018 05 |
| Evidence for Long-Timescale Patterns of Synaptic Inputs in CA1 of Awake Behaving Mice. | Kolb, Ilya; Talei Franzesi, Giovanni; Wang, Michael; Kodandaramaiah, Suhasa B; Forest, Craig R; Boyden, Edward S; Singer, Annabelle C | The Journal of neuroscience : the official journal of the Society for Neuroscience | 29279309 | 2018 Feb 14 |
| Adult Hippocampal Neurogenesis: A Coming-of-Age Story. | Kuhn, H Georg; Toda, Tomohisa; Gage, Fred H | The Journal of neuroscience : the official journal of the Society for Neuroscience | 30381404 | 2018 12 05 |
| Multiplexed imaging of high-density libraries of RNAs with MERFISH and expansion microscopy. | Wang, Guiping; Moffitt, Jeffrey R; Zhuang, Xiaowei | Scientific reports | 29555914 | 2018 Mar 19 |
| Superresolution imaging of Drosophila tissues using expansion microscopy. | Jiang, Nan; Kim, Hyeon-Jin; Chozinski, Tyler J; Azpurua, Jorge E; Eaton, Benjamin A; Vaughan, Joshua C; Parrish, Jay Z | Molecular biology of the cell | 29688792 | 2018 Jun 15 |
| TCR-pMHC encounter differentially regulates transcriptomes of tissue-resident CD8 T cells. | Yoshizawa, Akihiro; Bi, Kevin; Keskin, Derin B; Zhang, Guanglan; Reinhold, Bruce; Reinherz, Ellis L | European journal of immunology | 28872670 | 2018 01 |
| α1-FANGs: Protein Ligands Selective for the α-Bungarotoxin Site of the α1-Nicotinic Acetylcholine Receptor. | Nichols, Aaron L; Noridomi, Kaori; Hughes, Christopher R; Jalali-Yazdi, Farzad; Eaton, J Brek; Lai, Lan Huong; Advani, Gaurav; Lukas, Ronald J; Lester, Henry A; Chen, Lin; Roberts, Richard W | ACS chemical biology | 30059207 | 2018 09 21 |
| Microbiome as a tool and a target in the effort to address antimicrobial resistance. | Relman, David A; Lipsitch, Marc | Proceedings of the National Academy of Sciences of the United States of America | 30559176 | 2018 12 18 |
| Social stress shortens lifespan in mice. | Razzoli, Maria; Nyuyki-Dufe, Kewir; Gurney, Allison; Erickson, Connor; McCallum, Jacob; Spielman, Nicholas; Marzullo, Marta; Patricelli, Jessica; Kurata, Morito; Pope, Emily A; Touma, Chadi; Palme, Rupert; Largaespada, David A; Allison, David B; Bartolomucci, Alessandro | Aging cell | 29806171 | 2018 08 |
| Predator-secreted sulfolipids induce defensive responses in C. elegans. | Liu, Zheng; Kariya, Maro J; Chute, Christopher D; Pribadi, Amy K; Leinwand, Sarah G; Tong, Ada; Curran, Kevin P; Bose, Neelanjan; Schroeder, Frank C; Srinivasan, Jagan; Chalasani, Sreekanth H | Nature communications | 29555902 | 2018 Mar 19 |
| Single capillary oximetry and tissue ultrastructural sensing by dual-band dual-scan inverse spectroscopic optical coherence tomography. | Liu, Rongrong; Winkelmann, James A; Spicer, Graham; Zhu, Yunxiao; Eid, Aya; Ameer, Guillermo A; Backman, Vadim; Yi, Ji | Light, science & applications | 30839641 | 2018 |
| Development and Evaluation of mini-EXPLORER: A Long Axial Field-of-View PET Scanner for Nonhuman Primate Imaging. | Berg, Eric; Zhang, Xuezhu; Bec, Julien; Judenhofer, Martin S; Patel, Brijesh; Peng, Qiyu; Kapusta, Maciej; Schmand, Matthias; Casey, Michael E; Tarantal, Alice F; Qi, Jinyi; Badawi, Ramsey D; Cherry, Simon R | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 29419483 | 2018 06 |
| Innovations in Instrumentation for Positron Emission Tomography. | Berg, Eric; Cherry, Simon R | Seminars in nuclear medicine | 29852942 | 2018 07 |
| Performance assessment of a software-based coincidence processor for the EXPLORER total-body PET scanner. | Leung, Edwin K; Judenhofer, Martin S; Cherry, Simon R; Badawi, Ramsey D | Physics in medicine and biology | 30152793 | 2018 09 19 |
| Insulin Hexamer-Caged Gadolinium Ion as MRI Contrast-o-phore. | Taylor, Steven K; Tran, Timothy H; Liu, Michael Z; Harris, Paul E; Sun, Yanping; Jambawalikar, Sachin R; Tong, Liang; Stojanovic, Milan N | Chemistry (Weinheim an der Bergstrasse, Germany) | 29873848 | 2018 Jul 25 |
| Self-Assembly of a 3D DNA Crystal Structure with Rationally Designed Six-Fold Symmetry. | Zhang, Fei; Simmons, Chad R; Gates, Jade; Liu, Yan; Yan, Hao | Angewandte Chemie (International ed. in English) | 30066355 | 2018 09 17 |
| Establishment of human pluripotent stem cell-derived pancreatic β-like cells in the mouse pancreas. | Ma, Haiting; Wert, Katherine J; Shvartsman, Dmitry; Melton, Douglas A; Jaenisch, Rudolf | Proceedings of the National Academy of Sciences of the United States of America | 29599125 | 2018 Apr 10 |
| Probing key elements of teixobactin-lipid II interactions in membranes. | Wen, Po-Chao; Vanegas, Juan M; Rempe, Susan B; Tajkhorshid, Emad | Chemical science | 30210775 | 2018 Sep 14 |
| A set of experimentally validated, mutually orthogonal primers for combinatorially specifying genetic components. | Subramanian, Subu K; Russ, William P; Ranganathan, Rama | Synthetic biology (Oxford, England) | 32995509 | 2018 |
| Expansion microscopy: development and neuroscience applications. | Karagiannis, Emmanouil D; Boyden, Edward S | Current opinion in neurobiology | 29316506 | 2018 06 |
| Autism-associated neuroligin-4 mutation selectively impairs glycinergic synaptic transmission in mouse brainstem synapses. | Zhang, Bo; Gokce, Ozgun; Hale, W Dylan; Brose, Nils; Südhof, Thomas C | The Journal of experimental medicine | 29724786 | 2018 Jun 04 |
| The fragile X mutation impairs homeostatic plasticity in human neurons by blocking synaptic retinoic acid signaling. | Zhang, Zhenjie; Marro, Samuele G; Zhang, Yingsha; Arendt, Kristin L; Patzke, Christopher; Zhou, Bo; Fair, Tyler; Yang, Nan; Südhof, Thomas C; Wernig, Marius; Chen, Lu | Science translational medicine | 30068571 | 2018 08 01 |
| Towards an Understanding of Synapse Formation. | Südhof, Thomas C | Neuron | 30359597 | 2018 10 24 |
| Short telomeres - A hallmark of heritable cardiomyopathies. | Chang, Alex C Y; Blau, Helen M | Differentiation; research in biological diversity | 29482077 | 2018 Mar - Apr |
| A portable system for processing donated whole blood into high quality components without centrifugation. | Gifford, Sean C; Strachan, Briony C; Xia, Hui; Vörös, Eszter; Torabian, Kian; Tomasino, Taylor A; Griffin, Gary D; Lichtiger, Benjamin; Aung, Fleur M; Shevkoplyas, Sergey S | PloS one | 29346441 | 2018 |
| Total intravenous versus inhaled anesthesia in transsphenoidal tumor surgery. | Gollapudy, Suneeta; Poetker, David M; Sidhu, Jasmeet; Riess, Matthias L | American journal of otolaryngology | 30017373 | 2018 Sep - Oct |
| A fusion-protein approach enabling mammalian cell production of tumor targeting protein domains for therapeutic development. | Hu, Jia; Chen, Xiang; Zhang, Xuhua; Yuan, Xiaopeng; Yang, Mingjuan; Dai, Hui; Yang, Wei; Zhou, Qinghua; Wen, Weihong; Wang, Qirui; Qin, Weijun; Zhao, Aizhi | Protein science : a publication of the Protein Society | 29500915 | 2018 May |
| Micro-Inversions In Human Cancer Genomes. | Qu, Li; Zhu, Huaiqiu; Wang, May | Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference | 30440635 | 2018 Jul |
| Prediction of Heart Transplant Rejection Using Histopathological Whole-Slide Imaging. | Dooley, Adrienne E; Tong, Li; Deshpande, Shriprasad R; Wang, May D | ... IEEE-EMBS International Conference on Biomedical and Health Informatics. IEEE-EMBS International Conference on Biomedical and Health Informatics | 32551442 | 2018 Mar |
| Variance Regularized Counterfactual Risk Minimizationvia Variational Divergence Minimization. | Wu, Hang; Wang, May D | Proceedings of machine learning research | 32789292 | 2018 |
| A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade. | Jerby-Arnon, Livnat; Shah, Parin; Cuoco, Michael S; Rodman, Christopher; Su, Mei-Ju; Melms, Johannes C; Leeson, Rachel; Kanodia, Abhay; Mei, Shaolin; Lin, Jia-Ren; Wang, Shu; Rabasha, Bokang; Liu, David; Zhang, Gao; Margolais, Claire; Ashenberg, Orr; Ott, Patrick A; Buchbinder, Elizabeth I; Haq, Rizwan; Hodi, F Stephen; Boland, Genevieve M; Sullivan, Ryan J; Frederick, Dennie T; Miao, Benchun; Moll, Tabea; Flaherty, Keith T; Herlyn, Meenhard; Jenkins, Russell W; Thummalapalli, Rohit; Kowalczyk, Monika S; Cañadas, Israel; Schilling, Bastian; Cartwright, Adam N R; Luoma, Adrienne M; Malu, Shruti; Hwu, Patrick; Bernatchez, Chantale; Forget, Marie-Andrée; Barbie, David A; Shalek, Alex K; Tirosh, Itay; Sorger, Peter K; Wucherpfennig, Kai; Van Allen, Eliezer M; Schadendorf, Dirk; Johnson, Bruce E; Rotem, Asaf; Rozenblatt-Rosen, Orit; Garraway, Levi A; Yoon, Charles H; Izar, Benjamin; Regev, Aviv | Cell | 30388455 | 2018 11 01 |
| Radiotherapy induces responses of lung cancer to CTLA-4 blockade. | Formenti, Silvia C; Rudqvist, Nils-Petter; Golden, Encouse; Cooper, Benjamin; Wennerberg, Erik; Lhuillier, Claire; Vanpouille-Box, Claire; Friedman, Kent; Ferrari de Andrade, Lucas; Wucherpfennig, Kai W; Heguy, Adriana; Imai, Naoko; Gnjatic, Sacha; Emerson, Ryan O; Zhou, Xi Kathy; Zhang, Tuo; Chachoua, Abraham; Demaria, Sandra | Nature medicine | 30397353 | 2018 12 |
| Polyserotonin Nanoparticles as Multifunctional Materials for Biomedical Applications. | Nakatsuka, Nako; Hasani-Sadrabadi, Mohammad Mahdi; Cheung, Kevin M; Young, Thomas D; Bahlakeh, Ghasem; Moshaverinia, Alireza; Weiss, Paul S; Andrews, Anne M | ACS nano | 29664607 | 2018 05 22 |
| Aptamer-field-effect transistors overcome Debye length limitations for small-molecule sensing. | Nakatsuka, Nako; Yang, Kyung-Ae; Abendroth, John M; Cheung, Kevin M; Xu, Xiaobin; Yang, Hongyan; Zhao, Chuanzhen; Zhu, Bowen; Rim, You Seung; Yang, Yang; Weiss, Paul S; Stojanović, Milan N; Andrews, Anne M | Science (New York, N.Y.) | 30190311 | 2018 Oct 19 |
| Biosensor libraries harness large classes of binding domains for construction of allosteric transcriptional regulators. | Juárez, Javier F; Lecube-Azpeitia, Begoña; Brown, Stuart L; Johnston, Christopher D; Church, George M | Nature communications | 30082754 | 2018 08 06 |
| Bioengineered Systems and Designer Matrices That Recapitulate the Intestinal Stem Cell Niche. | Wang, Yuli; Kim, Raehyun; Hinman, Samuel S; Zwarycz, Bailey; Magness, Scott T; Allbritton, Nancy L | Cellular and molecular gastroenterology and hepatology | 29675459 | 2018 Mar |
| Reserve Stem Cells in Intestinal Homeostasis and Injury. | Bankaitis, Eric D; Ha, Andrew; Kuo, Calvin J; Magness, Scott T | Gastroenterology | 30118745 | 2018 Nov |
| Rationale redesign of type III secretion systems: toward the development of non-pathogenic E. coli for in vivo delivery of therapeutic payloads. | González-Prieto, Coral; Lesser, Cammie F | Current opinion in microbiology | 29141238 | 2018 Feb |
| A Near-Complete Spatial Map of Olfactory Receptors in the Mouse Main Olfactory Epithelium. | Tan, Longzhi; Xie, Xiaoliang Sunney | Chemical senses | 29796642 | 2018 07 05 |
| Ribocomputing: Cellular Logic Computation Using RNA Devices. | Kim, Jongmin; Yin, Peng; Green, Alexander A | Biochemistry | 29256603 | 2018 Feb 13 |
| Pathogen-Specific Bacterial Imaging in Nuclear Medicine. | Ordonez, Alvaro A; Jain, Sanjay K | Seminars in nuclear medicine | 29452620 | 2018 Mar |
| Tuberculous meningitis: a roadmap for advancing basic and translational research. | Jain, Sanjay K; Tobin, David M; Tucker, Elizabeth W; Venketaraman, Vishwanath; Ordonez, Alvaro A; Jayashankar, Lakshmi; Siddiqi, Omar K; Hammoud, Dima A; Prasadarao, Nemani V; Sandor, Matyas; Hafner, Richard; Fabry, Zsuzsanna; NIH Tuberculous Meningitis Writing Group | Nature immunology | 29777209 | 2018 06 |
| The fibrotic tumor stroma. | Yamauchi, Mitsuo; Barker, Thomas H; Gibbons, Don L; Kurie, Jonathan M | The Journal of clinical investigation | 29293090 | 2018 01 02 |
| αvβ3 Integrin drives fibroblast contraction and strain stiffening of soft provisional matrix during progressive fibrosis. | Fiore, Vincent F; Wong, Simon S; Tran, Coleen; Tan, Chunting; Xu, Wenwei; Sulchek, Todd; White, Eric S; Hagood, James S; Barker, Thomas H | JCI insight | 30333317 | 2018 10 18 |
| Biomimetic hierarchical walnut kernel-like and erythrocyte-like mesoporous silica nanomaterials: controllable synthesis and versatile applications. | Hao, Nanjing; Nie, Yuan; Zhang, John X J | Microporous and mesoporous materials : the official journal of the International Zeolite Association | 29479288 | 2018 May 01 |
| Tunable Buckled Beams with Mesoporous PVDF-TrFE/SWCNT Composite Film for Energy Harvesting. | Xu, Zhe; Liu, Yin; Dong, Lin; Closson, Andrew B; Hao, Nanjing; Oglesby, Meagan; Escobar, Gladys Patricia; Fu, Sidan; Han, Xiaomin; Wen, Chunsheng; Liu, Jifeng; Feldman, Marc David; Chen, Zi; Zhang, John X J | ACS applied materials & interfaces | 30199624 | 2018 Oct 03 |
| Using Behavioral Analytics to Increase Exercise: A Randomized N-of-1 Study. | Yoon, Sunmoo; Schwartz, Joseph E; Burg, Matthew M; Kronish, Ian M; Alcantara, Carmela; Julian, Jacob; Parsons, Faith; Davidson, Karina W; Diaz, Keith M | American journal of preventive medicine | 29429607 | 2018 04 |
| N-of-1 Randomized Intervention Trials in Health Psychology: A Systematic Review and Methodology Critique. | Shaffer, Jonathan A; Kronish, Ian M; Falzon, Louise; Cheung, Ying Kuen; Davidson, Karina W | Annals of behavioral medicine : a publication of the Society of Behavioral Medicine | 30124759 | 2018 08 16 |
| Developmental barcoding of whole mouse via homing CRISPR. | Kalhor, Reza; Kalhor, Kian; Mejia, Leo; Leeper, Kathleen; Graveline, Amanda; Mali, Prashant; Church, George M | Science (New York, N.Y.) | 30093604 | 2018 Aug 31 |
| APOE4 Causes Widespread Molecular and Cellular Alterations Associated with Alzheimer's Disease Phenotypes in Human iPSC-Derived Brain Cell Types. | Lin, Yuan-Ta; Seo, Jinsoo; Gao, Fan; Feldman, Heather M; Wen, Hsin-Lan; Penney, Jay; Cam, Hugh P; Gjoneska, Elizabeta; Raja, Waseem K; Cheng, Jemmie; Rueda, Richard; Kritskiy, Oleg; Abdurrob, Fatema; Peng, Zhuyu; Milo, Blerta; Yu, Chung Jong; Elmsaouri, Sara; Dey, Dilip; Ko, Tak; Yankner, Bruce A; Tsai, Li-Huei | Neuron | 29861287 | 2018 06 27 |
| Volumetric, Nanoscale Optical Imaging of Mouse and Human Kidney via Expansion Microscopy. | Chozinski, Tyler J; Mao, Chenyi; Halpern, Aaron R; Pippin, Jeffrey W; Shankland, Stuart J; Alpers, Charles E; Najafian, Behzad; Vaughan, Joshua C | Scientific reports | 29991751 | 2018 Jul 10 |
| Ratiometric Barcoding for Mass Cytometry. | Wu, Xu; DeGottardi, Quinn; Wu, I-Che; Wu, Li; Yu, Jiangbo; Kwok, William W; Chiu, Daniel T | Analytical chemistry | 30139253 | 2018 Sep 18 |
| Dynamics and Spatial Genomics of the Nascent Transcriptome by Intron seqFISH. | Shah, Sheel; Takei, Yodai; Zhou, Wen; Lubeck, Eric; Yun, Jina; Eng, Chee-Huat Linus; Koulena, Noushin; Cronin, Christopher; Karp, Christoph; Liaw, Eric J; Amin, Mina; Cai, Long | Cell | 29887381 | 2018 07 12 |
| αβ T Cell Receptor Mechanosensing Forces out Serial Engagement. | Feng, Yinnian; Reinherz, Ellis L; Lang, Matthew J | Trends in immunology | 30060805 | 2018 Aug |
| Neural Population Dynamics Underlying Motor Learning Transfer. | Vyas, Saurabh; Even-Chen, Nir; Stavisky, Sergey D; Ryu, Stephen I; Nuyujukian, Paul; Shenoy, Krishna V | Neuron | 29456026 | 2018 03 07 |
| ZFP36 RNA-binding proteins restrain T cell activation and anti-viral immunity. | Moore, Michael J; Blachere, Nathalie E; Fak, John J; Park, Christopher Y; Sawicka, Kirsty; Parveen, Salina; Zucker-Scharff, Ilana; Moltedo, Bruno; Rudensky, Alexander Y; Darnell, Robert B | eLife | 29848443 | 2018 05 31 |
| Using proprioception to get a better grasp on embodiment. | Marasco, Paul D | The Journal of physiology | 29194626 | 2018 Jan 15 |
| Selected psychological comorbidities in coronary heart disease: Challenges and grand opportunities. | Davidson, Karina W; Alcántara, Carmela; Miller, Gregory E | The American psychologist | 30394780 | 2018 11 |
| 3D nanofabrication by volumetric deposition and controlled shrinkage of patterned scaffolds. | Oran, Daniel; Rodriques, Samuel G; Gao, Ruixuan; Asano, Shoh; Skylar-Scott, Mark A; Chen, Fei; Tillberg, Paul W; Marblestone, Adam H; Boyden, Edward S | Science (New York, N.Y.) | 30545883 | 2018 12 14 |
| A bright future? Optogenetics in the periphery for pain research and therapy. | Mickle, Aaron D; Gereau 4th, Robert W | Pain | 30113949 | 2018 Sep |
| Illusory movement perception improves motor control for prosthetic hands. | Marasco, Paul D; Hebert, Jacqueline S; Sensinger, Jon W; Shell, Courtney E; Schofield, Jonathon S; Thumser, Zachary C; Nataraj, Raviraj; Beckler, Dylan T; Dawson, Michael R; Blustein, Dan H; Gill, Satinder; Mensh, Brett D; Granja-Vazquez, Rafael; Newcomb, Madeline D; Carey, Jason P; Orzell, Beth M | Science translational medicine | 29540617 | 2018 03 14 |
| Q&A: Array tomography. | Smith, Stephen J | BMC biology | 30189863 | 2018 Sep 06 |
| Late-life targeting of the IGF-1 receptor improves healthspan and lifespan in female mice. | Mao, Kai; Quipildor, Gabriela Farias; Tabrizian, Tahmineh; Novaj, Ardijana; Guan, Fangxia; Walters, Ryan O; Delahaye, Fabien; Hubbard, Gene B; Ikeno, Yuji; Ejima, Keisuke; Li, Peng; Allison, David B; Salimi-Moosavi, Hossein; Beltran, Pedro J; Cohen, Pinchas; Barzilai, Nir; Huffman, Derek M | Nature communications | 29921922 | 2018 Jun 19 |
| Who Resembles a Scientific Leader-Jack or Jill? How Implicit Bias Could Influence Research Grant Funding. | Kolehmainen, Christine; Carnes, Molly | Circulation | 29459461 | 2018 Feb 20 |
| Variability in pharmacologically-induced coma for treatment of refractory status epilepticus. | An, Jingzhi; Jonnalagadda, Durga; Moura Junior, Valdery; Purdon, Patrick L; Brown, Emery N; Westover, M Brandon | PloS one | 30379935 | 2018 |
| Rescue of Fragile X Syndrome Neurons by DNA Methylation Editing of the FMR1 Gene. | Liu, X Shawn; Wu, Hao; Krzisch, Marine; Wu, Xuebing; Graef, John; Muffat, Julien; Hnisz, Denes; Li, Charles H; Yuan, Bingbing; Xu, Chuanyun; Li, Yun; Vershkov, Dan; Cacace, Angela; Young, Richard A; Jaenisch, Rudolf | Cell | 29456084 | 2018 02 22 |
| Snapshots of an evolved DNA polymerase pre- and post-incorporation of an unnatural nucleotide. | Singh, Isha; Laos, Roberto; Hoshika, Shuichi; Benner, Steven A; Georgiadis, Millie M | Nucleic acids research | 29986111 | 2018 09 06 |
| Unconventional function of an Achaete-Scute homolog as a terminal selector of nociceptive neuron identity. | Masoudi, Neda; Tavazoie, Saeed; Glenwinkel, Lori; Ryu, Leesun; Kim, Kyuhyung; Hobert, Oliver | PLoS biology | 29672507 | 2018 04 |
| Impact of event positioning algorithm on performance of a whole-body PET scanner using one-to-one coupled detectors. | Surti, S; Karp, J S | Physics in medicine and biology | 29411709 | 2018 Mar 02 |
| Grafting or pruning in the animal tree: lateral gene transfer and gene loss? | Dunning Hotopp, Julie C | BMC genomics | 29914363 | 2018 Jun 18 |
| Dark Classics in Chemical Neuroscience: 3,4-Methylenedioxymethamphetamine. | Dunlap, Lee E; Andrews, Anne M; Olson, David E | ACS chemical neuroscience | 30001118 | 2018 10 17 |
| RNA-Based Fluorescent Biosensors for Detecting Metabolites in vitro and in Living Cells. | Jaffrey, Samie R | Advances in pharmacology (San Diego, Calif.) | 29413520 | 2018 |
| Tumour endothelial marker 1/endosialin-mediated targeting of human sarcoma. | Guo, Y; Hu, J; Wang, Y; Peng, X; Min, J; Wang, J; Matthaiou, E; Cheng, Y; Sun, K; Tong, X; Fan, Y; Zhang, P J; Kandalaft, L E; Irving, M; Coukos, G; Li, C | European journal of cancer (Oxford, England : 1990) | 29304474 | 2018 02 |
| Apoptosis-induced CXCL5 accelerates inflammation and growth of prostate tumor metastases in bone. | Roca, Hernan; Jones, Jacqueline D; Purica, Marta C; Weidner, Savannah; Koh, Amy J; Kuo, Robert; Wilkinson, John E; Wang, Yugang; Daignault-Newton, Stephanie; Pienta, Kenneth J; Morgan, Todd M; Keller, Evan T; Nör, Jacques E; Shea, Lonnie D; McCauley, Laurie K | The Journal of clinical investigation | 29202471 | 2018 01 02 |
| Histone demethylase LSD1 regulates hematopoietic stem cells homeostasis and protects from death by endotoxic shock. | Wang, Jianxun; Saijo, Kaoru; Skola, Dylan; Jin, Chunyu; Ma, Qi; Merkurjev, Daria; Glass, Christopher K; Rosenfeld, Michael G | Proceedings of the National Academy of Sciences of the United States of America | 29263096 | 2018 Jan 09 |
| High-resolution deep functional imaging of the whole mouse brain by photoacoustic computed tomography in vivo. | Zhang, Pengfei; Li, Lei; Lin, Li; Hu, Peng; Shi, Junhui; He, Yun; Zhu, Liren; Zhou, Yong; Wang, Lihong V | Journal of biophotonics | 28635056 | 2018 Jan |
| High-throughput ultraviolet photoacoustic microscopy with multifocal excitation. | Imai, Toru; Shi, Junhui; Wong, Terence T W; Li, Lei; Zhu, Liren; Wang, Lihong V | Journal of biomedical optics | 29546734 | 2018 Mar |
| Recent progress in photoacoustic molecular imaging. | Yao, Junjie; Wang, Lihong V | Current opinion in chemical biology | 29631120 | 2018 08 |
| Small near-infrared photochromic protein for photoacoustic multi-contrast imaging and detection of protein interactions in vivo. | Li, Lei; Shemetov, Anton A; Baloban, Mikhail; Hu, Peng; Zhu, Liren; Shcherbakova, Daria M; Zhang, Ruiying; Shi, Junhui; Yao, Junjie; Wang, Lihong V; Verkhusha, Vladislav V | Nature communications | 30013153 | 2018 Jul 16 |
| Dual-view photoacoustic microscopy for quantitative cell nuclear imaging. | Cai, De; Wong, Terence T W; Zhu, Liren; Shi, Junhui; Chen, Sung-Liang; Wang, Lihong V | Optics letters | 30320772 | 2018 Oct 15 |
| Tumor characterization by ultrasound-release of multiple protein and microRNA biomarkers, preclinical and clinical evidence. | D'Souza, Aloma L; Chevillet, John R; Ghanouni, Pejman; Yan, Xinrui; Tewari, Muneesh; Gambhir, Sanjiv S | PloS one | 29547636 | 2018 |
| Droplet Digital PCR for Absolute Quantification of Extracellular MicroRNAs in Plasma and Serum: Quantification of the Cancer Biomarker hsa-miR-141. | Giraldez, Maria D; Chevillet, John R; Tewari, Muneesh | Methods in molecular biology (Clifton, N.J.) | 29717459 | 2018 |
| Using a network organisational architecture to support the development of Learning Healthcare Systems. | Britto, Maria T; Fuller, Sandra C; Kaplan, Heather C; Kotagal, Uma; Lannon, Carole; Margolis, Peter A; Muething, Stephen E; Schoettker, Pamela J; Seid, Michael | BMJ quality & safety | 29438072 | 2018 11 |
| "A Guide to Gutsy Living": Patient-Driven Development of a Pediatric Ostomy Toolkit. | David, Jennie G; Jofriet, Alexander; Seid, Michael; Margolis, Peter A; ImproveCareNow Pediatric IBD Learning Health System | Pediatrics | 29610402 | 2018 May |
| Engineered CRISPR-Cas9 nuclease with expanded targeting space. | Nishimasu, Hiroshi; Shi, Xi; Ishiguro, Soh; Gao, Linyi; Hirano, Seiichi; Okazaki, Sae; Noda, Taichi; Abudayyeh, Omar O; Gootenberg, Jonathan S; Mori, Hideto; Oura, Seiya; Holmes, Benjamin; Tanaka, Mamoru; Seki, Motoaki; Hirano, Hisato; Aburatani, Hiroyuki; Ishitani, Ryuichiro; Ikawa, Masahito; Yachie, Nozomu; Zhang, Feng; Nureki, Osamu | Science (New York, N.Y.) | 30166441 | 2018 09 21 |
| Development of Arrayed Colonic Organoids for Screening of Secretagogues Associated with Enterotoxins. | Gunasekara, Dulan B; DiSalvo, Matthew; Wang, Yuli; Nguyen, Daniel L; Reed, Mark I; Speer, Jennifer; Sims, Christopher E; Magness, Scott T; Allbritton, Nancy L | Analytical chemistry | 29281259 | 2018 Feb 06 |
| A Monolayer of Primary Colonic Epithelium Generated on a Scaffold with a Gradient of Stiffness for Drug Transport Studies. | Gunasekara, Dulan B; Speer, Jennifer; Wang, Yuli; Nguyen, Daniel L; Reed, Mark I; Smiddy, Nicole M; Parker, Joel S; Fallon, John K; Smith, Philip C; Sims, Christopher E; Magness, Scott T; Allbritton, Nancy L | Analytical chemistry | 30350627 | 2018 11 20 |
| Pharmacokinetics of rifapentine and rifampin in a rabbit model of tuberculosis and correlation with clinical trial data. | Rifat, Dalin; Prideaux, Brendan; Savic, Radojka M; Urbanowski, Michael E; Parsons, Teresa L; Luna, Brian; Marzinke, Mark A; Ordonez, Alvaro A; DeMarco, Vincent P; Jain, Sanjay K; Dartois, Veronique; Bishai, William R; Dooley, Kelly E | Science translational medicine | 29618565 | 2018 Apr 04 |
| Body Mass Index and Subjective Social Status: The Coronary Artery Risk Development in Young Adults Study. | Dhurandhar, Emily J; Pavela, Gregory; Kaiser, Kathryn A; Dutton, Gareth R; Fontaine, Kevin R; Kim, Daniel; Shikany, James M; Allison, David B; Lewis, Cora E | Obesity (Silver Spring, Md.) | 29280341 | 2018 Feb |
| No Significant Effect of Maternal Perception of the Food Environment on Reproductive Success or Pup Outcomes in C57BL/6J Mice. | Gibbs, Victoria K; Schwartz, Tonia S; Johnson, Maria S; Patki, Amit; Nagy, Tim R; George, Brandon J; Allison, David B | Obesity (Silver Spring, Md.) | 29476611 | 2018 Apr |
| Age and the association of dementia-related pathology with trajectories of cognitive decline. | Jansen, Willemijn J; Wilson, Robert S; Visser, Pieter Jelle; Nag, Sukriti; Schneider, Julie A; James, Bryan D; Leurgans, Sue E; Capuano, Ana W; Bennett, David A; Boyle, Patricia A | Neurobiology of aging | 29078129 | 2018 01 |
| Microglial signatures and their role in health and disease. | Butovsky, Oleg; Weiner, Howard L | Nature reviews. Neuroscience | 30206328 | 2018 10 |
| A primary role for human central memory cells in tissue immunosurveillance. | Gehad, Ahmed; Teague, Jessica E; Matos, Tiago R; Huang, Victor; Yang, Chao; Watanabe, Rei; O'Malley, John T; Trimble, Cornelia L; Kupper, Thomas S; Clark, Rachael A | Blood advances | 29437556 | 2018 02 13 |
| Outcomes of intermediate-risk patients treated with transcatheter and surgical aortic valve replacement in the Veterans Affairs Healthcare System: A single center 20-year experience. | Garcia, Santiago; Kelly, Rosemary; Mbai, Mackenzie; Gurevich, Sergey; Oestreich, Brett; Yannopoulos, Demetris; Adabag, Selcuk | Catheterization and cardiovascular interventions : official journal of the Society for Cardiac Angiography & Interventions | 29316204 | 2018 08 01 |
| In vitro conversion of adult murine endothelial cells to hematopoietic stem cells. | Barcia Durán, José Gabriel; Lis, Raphaël; Lu, Tyler M; Rafii, Shahin | Nature protocols | 30429596 | 2018 Dec |
| Microfluidics-enabled rational design of immunomagnetic nanomaterials and their shape effect on liquid biopsy. | Hao, Nanjing; Nie, Yuan; Shen, Ting; Zhang, John X J | Lab on a chip | 29923569 | 2018 Jul 10 |
| Microfluidics-enabled rapid manufacturing of hierarchical silica-magnetic microflower toward enhanced circulating tumor cell screening. | Hao, Nanjing; Nie, Yuan; Tadimety, Amogha; Shen, Ting; Zhang, John X J | Biomaterials science | 30375583 | 2018 Nov 20 |
| Multiplexed and portable nucleic acid detection platform with Cas13, Cas12a, and Csm6. | Gootenberg, Jonathan S; Abudayyeh, Omar O; Kellner, Max J; Joung, Julia; Collins, James J; Zhang, Feng | Science (New York, N.Y.) | 29449508 | 2018 Apr 27 |
| Discovery of proteins associated with a predefined genomic locus via dCas9-APEX-mediated proximity labeling. | Myers, Samuel A; Wright, Jason; Peckner, Ryan; Kalish, Brian T; Zhang, Feng; Carr, Steven A | Nature methods | 29735997 | 2018 06 |
| Effects of 3D culturing conditions on the transcriptomic profile of stem-cell-derived neurons. | Tekin, Halil; Simmons, Sean; Cummings, Beryl; Gao, Linyi; Adiconis, Xian; Hession, Cynthia C; Ghoshal, Ayan; Dionne, Danielle; Choudhury, Sourav R; Yesilyurt, Volkan; Sanjana, Neville E; Shi, Xi; Lu, Congyi; Heidenreich, Matthias; Pan, Jen Q; Levin, Joshua Z; Zhang, Feng | Nature biomedical engineering | 30271673 | 2018 Jul |
| Molecular, spatial, and functional single-cell profiling of the hypothalamic preoptic region. | Moffitt, Jeffrey R; Bambah-Mukku, Dhananjay; Eichhorn, Stephen W; Vaughn, Eric; Shekhar, Karthik; Perez, Julio D; Rubinstein, Nimrod D; Hao, Junjie; Regev, Aviv; Dulac, Catherine; Zhuang, Xiaowei | Science (New York, N.Y.) | 30385464 | 2018 Nov 16 |
| TBK1 Suppresses RIPK1-Driven Apoptosis and Inflammation during Development and in Aging. | Xu, Daichao; Jin, Taijie; Zhu, Hong; Chen, Hongbo; Ofengeim, Dimitry; Zou, Chengyu; Mifflin, Lauren; Pan, Lifeng; Amin, Palak; Li, Wanjin; Shan, Bing; Naito, Masanori Gomi; Meng, Huyan; Li, Ying; Pan, Heling; Aron, Liviu; Adiconis, Xian; Levin, Joshua Z; Yankner, Bruce A; Yuan, Junying | Cell | 30146158 | 2018 09 06 |
| Brain activity patterns in high-throughput electrophysiology screen predict both drug efficacies and side effects. | Eimon, Peter M; Ghannad-Rezaie, Mostafa; De Rienzo, Gianluca; Allalou, Amin; Wu, Yuelong; Gao, Mu; Roy, Ambrish; Skolnick, Jeffrey; Yanik, Mehmet Fatih | Nature communications | 29335539 | 2018 Jan 15 |
| A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters. | Piatkevich, Kiryl D; Jung, Erica E; Straub, Christoph; Linghu, Changyang; Park, Demian; Suk, Ho-Jun; Hochbaum, Daniel R; Goodwin, Daniel; Pnevmatikakis, Eftychios; Pak, Nikita; Kawashima, Takashi; Yang, Chao-Tsung; Rhoades, Jeffrey L; Shemesh, Or; Asano, Shoh; Yoon, Young-Gyu; Freifeld, Limor; Saulnier, Jessica L; Riegler, Clemens; Engert, Florian; Hughes, Thom; Drobizhev, Mikhail; Szabo, Balint; Ahrens, Misha B; Flavell, Steven W; Sabatini, Bernardo L; Boyden, Edward S | Nature chemical biology | 29483642 | 2018 04 |
| omniCLIP: probabilistic identification of protein-RNA interactions from CLIP-seq data. | Drewe-Boss, Philipp; Wessels, Hans-Hermann; Ohler, Uwe | Genome biology | 30384847 | 2018 11 01 |
| Solid-State NMR of highly 13C-enriched cholesterol in lipid bilayers. | Della Ripa, Lisa A; Petros, Zoe A; Cioffi, Alexander G; Piehl, Dennis W; Courtney, Joseph M; Burke, Martin D; Rienstra, Chad M | Methods (San Diego, Calif.) | 29366688 | 2018 Apr 01 |
| Microscopic view of lipids and their diverse biological functions. | Wen, Po-Chao; Mahinthichaichan, Paween; Trebesch, Noah; Jiang, Tao; Zhao, Zhiyu; Shinn, Eric; Wang, Yuhang; Shekhar, Mrinal; Kapoor, Karan; Chan, Chun Kit; Tajkhorshid, Emad | Current opinion in structural biology | 30048836 | 2018 08 |
| High-Content Microfluidic Screening Platform Used To Identify σ2R/Tmem97 Binding Ligands that Reduce Age-Dependent Neurodegeneration in C. elegans SC_APP Model. | Mondal, Sudip; Hegarty, Evan; Sahn, James J; Scott, Luisa L; Gökçe, Sertan Kutal; Martin, Chris; Ghorashian, Navid; Satarasinghe, Praveen Navoda; Iyer, Sangeetha; Sae-Lee, Wisath; Hodges, Timothy R; Pierce, Jonathan T; Martin, Stephen F; Ben-Yakar, Adela | ACS chemical neuroscience | 29426225 | 2018 May 16 |
| Sex-dependent Differences in Liver and Gut Metabolomic Profiles With Acarbose and Calorie Restriction in C57BL/6 Mice. | Gibbs, Victoria K; Brewer, Rachel A; Miyasaki, Nathan D; Patki, Amit; Smith Jr, Daniel L | The journals of gerontology. Series A, Biological sciences and medical sciences | 28651373 | 2018 01 16 |
| Acute microglia ablation induces neurodegeneration in the somatosensory system. | Rubino, Stephen J; Mayo, Lior; Wimmer, Isabella; Siedler, Victoria; Brunner, Florian; Hametner, Simon; Madi, Asaf; Lanser, Amanda; Moreira, Thais; Donnelly, Dustin; Cox, Laura; Rezende, Rafael Machado; Butovsky, Oleg; Lassmann, Hans; Weiner, Howard L | Nature communications | 30385785 | 2018 11 01 |
| Systemic Upregulation of IL-10 (Interleukin-10) Using a Nonimmunogenic Vector Reduces Growth and Rate of Dissecting Abdominal Aortic Aneurysm. | Adam, Matti; Kooreman, Nigel Geoffrey; Jagger, Ann; Wagenhäuser, Markus U; Mehrkens, Dennis; Wang, Yongming; Kayama, Yosuke; Toyama, Kensuke; Raaz, Uwe; Schellinger, Isabel N; Maegdefessel, Lars; Spin, Joshua M; Hamming, Jaap F; Quax, Paul H A; Baldus, Stephan; Wu, Joseph C; Tsao, Philip S | Arteriosclerosis, thrombosis, and vascular biology | 29880489 | 2018 08 |
| Quorum-sensing regulator RhlR but not its autoinducer RhlI enables Pseudomonas to evade opsonization. | Haller, Samantha; Franchet, Adrien; Hakkim, Abdul; Chen, Jing; Drenkard, Eliana; Yu, Shen; Schirmeier, Stefanie; Li, Zi; Martins, Nelson; Ausubel, Frederick M; Liégeois, Samuel; Ferrandon, Dominique | EMBO reports | 29523648 | 2018 05 |
| Proteasome inhibition blocks necroptosis by attenuating death complex aggregation. | Ali, Mohammad; Mocarski, Edward S | Cell death & disease | 29497034 | 2018 03 01 |
| Caspase-8 Collaborates with Caspase-11 to Drive Tissue Damage and Execution of Endotoxic Shock. | Mandal, Pratyusha; Feng, Yanjun; Lyons, John D; Berger, Scott B; Otani, Shunsuke; DeLaney, Alexandra; Tharp, Gregory K; Maner-Smith, Kristal; Burd, Eileen M; Schaeffer, Michelle; Hoffman, Sandra; Capriotti, Carol; Roback, Linda; Young, Cedrick B; Liang, Zhe; Ortlund, Eric A; DiPaolo, Nelson C; Bosinger, Steven; Bertin, John; Gough, Peter J; Brodsky, Igor E; Coopersmith, Craig M; Shayakhmetov, Dmitry M; Mocarski, Edward S | Immunity | 30021146 | 2018 07 17 |
| Remarkably Robust Antiviral Immune Response despite Combined Deficiency in Caspase-8 and RIPK3. | Feng, Yanjun; Livingston-Rosanoff, Devon; Roback, Linda; Sundararajan, Aarthi; Speck, Samuel H; Mocarski, Edward S; Daley-Bauer, Lisa P | Journal of immunology (Baltimore, Md. : 1950) | 30194111 | 2018 10 15 |
| Impaired Notch Signaling Leads to a Decrease in p53 Activity and Mitotic Catastrophe in Aged Muscle Stem Cells. | Liu, Ling; Charville, Gregory W; Cheung, Tom H; Yoo, Bryan; Santos, Pauline J; Schroeder, Matthew; Rando, Thomas A | Cell stem cell | 30244867 | 2018 Oct 04 |
| Biomechanics show stem cell necessity for effective treatment of volumetric muscle loss using bioengineered constructs. | Quarta, Marco; Cromie Lear, Melinda J; Blonigan, Justin; Paine, Patrick; Chacon, Robert; Rando, Thomas A | NPJ Regenerative medicine | 30323949 | 2018 |
| High-speed alignment optimization of digital optical phase conjugation systems based on autocovariance analysis in conjunction with orthonormal rectangular polynomials. | Hemphill, Ashton S; Shen, Yuecheng; Hwang, Jeeseong; Wang, Lihong V | Journal of biomedical optics | 30156064 | 2018 08 |
| Imaging Macrophage-associated Inflammation. | Foss, Catherine A; Sanchez-Bautista, Julian; Jain, Sanjay K | Seminars in nuclear medicine | 29626941 | 2018 May |
| Joint solution for PET image segmentation, denoising, and partial volume correction. | Xu, Ziyue; Gao, Mingchen; Papadakis, Georgios Z; Luna, Brian; Jain, Sanjay; Mollura, Daniel J; Bagci, Ulas | Medical image analysis | 29627687 | 2018 May |
| Noninvasive 11C-rifampin positron emission tomography reveals drug biodistribution in tuberculous meningitis. | Tucker, Elizabeth W; Guglieri-Lopez, Beatriz; Ordonez, Alvaro A; Ritchie, Brittaney; Klunk, Mariah H; Sharma, Richa; Chang, Yong S; Sanchez-Bautista, Julian; Frey, Sarah; Lodge, Martin A; Rowe, Steven P; Holt, Daniel P; Gobburu, Jogarao V S; Peloquin, Charles A; Mathews, William B; Dannals, Robert F; Pardo, Carlos A; Kannan, Sujatha; Ivaturi, Vijay D; Jain, Sanjay K | Science translational medicine | 30518610 | 2018 12 05 |
| Perspectives on In Vitro to In Vivo Extrapolations. | Hartung, Thomas | Applied in vitro toxicology | 31890748 | 2018 Dec 01 |
| Patient preferences for personalized (N-of-1) trials: a conjoint analysis. | Moise, Nathalie; Wood, Dallas; Cheung, Ying Kuen K; Duan, Naihua; Onge, Tara St; Duer-Hefele, Joan; Pu, Tiffany; Davidson, Karina W; Kronish, Ian M; Members of the “Personalized Trial Collaboratory” | Journal of clinical epidemiology | 29859242 | 2018 Oct |
| A rapid method for determining protein diffusion through hydrogels for regenerative medicine applications. | Hettiaratchi, Marian H; Schudel, Alex; Rouse, Tel; García, Andrés J; Thomas, Susan N; Guldberg, Robert E; McDevitt, Todd C | APL bioengineering | 31069307 | 2018 Jun |
| Retrievable hydrogels for ovarian follicle transplantation and oocyte collection. | Rios, Peter D; Kniazeva, Ekaterina; Lee, Hoi Chang; Xiao, Shuo; Oakes, Robert S; Saito, Eiji; Jeruss, Jacqueline S; Shikanov, Ariella; Woodruff, Teresa K; Shea, Lonnie D | Biotechnology and bioengineering | 29704433 | 2018 08 |
| Antibody-mediated inhibition of MICA and MICB shedding promotes NK cell-driven tumor immunity. | Ferrari de Andrade, Lucas; Tay, Rong En; Pan, Deng; Luoma, Adrienne M; Ito, Yoshinaga; Badrinath, Soumya; Tsoucas, Daphne; Franz, Bettina; May Jr, Kenneth F; Harvey, Christopher J; Kobold, Sebastian; Pyrdol, Jason W; Yoon, Charles; Yuan, Guo-Cheng; Hodi, F Stephen; Dranoff, Glenn; Wucherpfennig, Kai W | Science (New York, N.Y.) | 29599246 | 2018 Mar 30 |
| Intergenerational transfer of antibiotic-perturbed microbiota enhances colitis in susceptible mice. | Schulfer, Anjelique F; Battaglia, Thomas; Alvarez, Yelina; Bijnens, Luc; Ruiz, Victoria E; Ho, Melody; Robinson, Serina; Ward, Tonya; Cox, Laura M; Rogers, Arlin B; Knights, Dan; Sartor, R Balfour; Blaser, Martin J | Nature microbiology | 29180726 | 2018 Feb |
| The Macronuclear Genome of Stentor coeruleus Reveals Tiny Introns in a Giant Cell. | Slabodnick, Mark M; Ruby, J Graham; Reiff, Sarah B; Swart, Estienne C; Gosai, Sager; Prabakaran, Sudhakaran; Witkowska, Ewa; Larue, Graham E; Fisher, Susan; Freeman Jr, Robert M; Gunawardena, Jeremy; Chu, William; Stover, Naomi A; Gregory, Brian D; Nowacki, Mariusz; Derisi, Joseph; Roy, Scott W; Marshall, Wallace F; Sood, Pranidhi | Current biology : CB | 28190732 | 2017 Feb 20 |
| Subcellular Fractionation for ERK Activation Upon Mitochondrial-derived Peptide Treatment. | Kim, Su-Jeong; Xiao, Jialin; Cohen, Pinchas; Yen, Kelvin | Journal of visualized experiments : JoVE | 28994791 | 2017 Sep 25 |
| Protein Chemical Modification Inside Living Cells Using Split Inteins. | Borra, Radhika; Camarero, Julio A | Methods in molecular biology (Clifton, N.J.) | 27714613 | 2017 |
| An miRNA Expression Signature for the Human Colonic Stem Cell Niche Distinguishes Malignant from Normal Epithelia. | Viswanathan, Vignesh; Damle, Shirish; Zhang, Tao; Opdenaker, Lynn; Modarai, Shirin; Accerbi, Monica; Schmidt, Skye; Green, Pamela; Galileo, Deni; Palazzo, Juan; Fields, Jeremy; Haghighat, Sepehr; Rigoutsos, Isidore; Gonye, Greg; Boman, Bruce M | Cancer research | 28487386 | 2017 Jul 15 |
| Influence of red blood cell aggregation on perfusion of an artificial microvascular network. | Reinhart, Walter H; Piety, Nathaniel Z; Shevkoplyas, Sergey S | Microcirculation (New York, N.Y. : 1994) | 27647727 | 2017 Jul |
| Optimal hematocrit in an artificial microvascular network. | Piety, Nathaniel Z; Reinhart, Walter H; Stutz, Julianne; Shevkoplyas, Sergey S | Transfusion | 28681482 | 2017 Sep |
| Role of epinephrine and extracorporeal membrane oxygenation in the management of ischemic refractory ventricular fibrillation: a randomized trial in pigs. | Bartos, Jason A; Voicu, Sebastian; Matsuura, Timothy R; Tsangaris, Adamantios; Sideris, Georgios; Oestreich, Brett A; George, Stephen A; Olson, Matthew; Shekar, Kadambari Chandra; Rees, Jennifer N; Carlson, Kathleen; Sebastian, Pierre; McKnite, Scott; Raveendran, Ganesh; Aufderheide, Tom P; Yannopoulos, Demetris | JACC. Basic to translational science | 29152600 | 2017 Jun |
| Susceptibility of Human Endogenous Retrovirus Type K to Reverse Transcriptase Inhibitors. | Contreras-Galindo, Rafael; Dube, Derek; Fujinaga, Koh; Kaplan, Mark H; Markovitz, David M | Journal of virology | 28931682 | 2017 Dec 01 |
| Targeted epigenetic repression of a lymphoma oncogene by sequence-specific histone modifiers induces apoptosis in DLBCL. | Luo, Hong; Schmidt, Jennifer A; Lee, Yi-Shan; Oltz, Eugene M; Payton, Jacqueline E | Leukemia & lymphoma | 27268204 | 2017 Feb |
| Trace incorporation of heavy water reveals slow and heterogeneous pathogen growth rates in cystic fibrosis sputum. | Kopf, Sebastian H; Sessions, Alex L; Cowley, Elise S; Reyes, Carmen; Van Sambeek, Lindsey; Hu, Yang; Orphan, Victoria J; Kato, Roberta; Newman, Dianne K | Proceedings of the National Academy of Sciences of the United States of America | 26715741 | 2016 Jan 12 |
| A Germline Variant on Chromosome 4q31.1 Associates with Susceptibility to Developing Colon Cancer Metastasis. | Markowitz, Sanford D; Nock, Nora L; Schmit, Stephanie L; Stadler, Zsofia K; Joseph, Vijai; Zhang, Lu; Willis, Joseph E; Scacheri, Peter; Veigl, Martina; Adams, Mark D; Raskin, Leon; Sullivan, John F; Stratton, Kelly; Shia, Jinru; Ellis, Nathan; Rennert, Hedy S; Manschreck, Christopher; Li, Li; Offit, Kenneth; Elston, Robert C; Rennert, Gadi; Gruber, Stephen B | PloS one | 26751797 | 2016 |
| Microenvironment-dependent growth of preneoplastic and malignant plasma cells in humanized mice. | Das, Rituparna; Strowig, Till; Verma, Rakesh; Koduru, Srinivas; Hafemann, Anja; Hopf, Stephanie; Kocoglu, Mehmet H; Borsotti, Chiara; Zhang, Lin; Branagan, Andrew; Eynon, Elizabeth; Manz, Markus G; Flavell, Richard A; Dhodapkar, Madhav V | Nature medicine | 27723723 | 2016 Nov |
| Mapping of Variable DNA Methylation Across Multiple Cell Types Defines a Dynamic Regulatory Landscape of the Human Genome. | Gu, Junchen; Stevens, Michael; Xing, Xiaoyun; Li, Daofeng; Zhang, Bo; Payton, Jacqueline E; Oltz, Eugene M; Jarvis, James N; Jiang, Kaiyu; Cicero, Theodore; Costello, Joseph F; Wang, Ting | G3 (Bethesda, Md.) | 26888867 | 2016 04 07 |
| Intraoperative Spectroscopy with Ultrahigh Sensitivity for Image-Guided Surgery of Malignant Brain Tumors. | Kairdolf, Brad A; Bouras, Alexandros; Kaluzova, Milota; Sharma, Abhinav K; Wang, May Dongmei; Hadjipanayis, Constantinos G; Nie, Shuming | Analytical chemistry | 26587976 | 2016 Jan 05 |
| A Novel Temporal Similarity Measure for Patients Based on Irregularly Measured Data in Electronic Health Records. | Sha, Ying; Venugopalan, Janani; Wang, May D | ACM-BCB ... ... : the ... ACM Conference on Bioinformatics, Computational Biology and Biomedicine. ACM Conference on Bioinformatics, Computational Biology and Biomedicine | 32577627 | 2016 Oct |
| Plakophilin-2 loss promotes TGF-β1/p38 MAPK-dependent fibrotic gene expression in cardiomyocytes. | Dubash, Adi D; Kam, Chen Y; Aguado, Brian A; Patel, Dipal M; Delmar, Mario; Shea, Lonnie D; Green, Kathleen J | The Journal of cell biology | 26858265 | 2016 Feb 15 |
| A review of snapshot multidimensional optical imaging: measuring photon tags in parallel. | Gao, Liang; Wang, Lihong V | Physics reports | 27134340 | 2016 Feb 29 |
| Genome Editing in Human Pluripotent Stem Cells: Approaches, Pitfalls, and Solutions. | Hendriks, William T; Warren, Curtis R; Cowan, Chad A | Cell stem cell | 26748756 | 2016 Jan 07 |
| A distant trophoblast-specific enhancer controls HLA-G expression at the maternal-fetal interface. | Ferreira, Leonardo M R; Meissner, Torsten B; Mikkelsen, Tarjei S; Mallard, William; O'Donnell, Charles W; Tilburgs, Tamara; Gomes, Hannah A B; Camahort, Raymond; Sherwood, Richard I; Gifford, David K; Rinn, John L; Cowan, Chad A; Strominger, Jack L | Proceedings of the National Academy of Sciences of the United States of America | 27078102 | 2016 May 10 |
| Diverse evolutionary roots and mechanistic variations of the CRISPR-Cas systems. | Mohanraju, Prarthana; Makarova, Kira S; Zetsche, Bernd; Zhang, Feng; Koonin, Eugene V; van der Oost, John | Science (New York, N.Y.) | 27493190 | 2016 Aug 05 |
| Predominance of Lactobacillus spp. Among Patients Who Do Not Acquire Multidrug-Resistant Organisms. | Araos, Rafael; Tai, Albert K; Snyder, Graham M; Blaser, Martin J; D'Agata, Erika M C | Clinical infectious diseases : an official publication of the Infectious Diseases Society of America | 27358350 | 2016 Oct 01 |
| Butyrate consumption of differentiated colonocytes in the upper crypt promotes homeostatic proliferation of stem and progenitor cells near the crypt base. | Bultman, Scott J | Translational cancer research | 30568890 | 2016 Sep |
| saRNA-guided Ago2 targets the RITA complex to promoters to stimulate transcription. | Portnoy, Victoria; Lin, Szu Hua Sharon; Li, Kathy H; Burlingame, Alma; Hu, Zheng-Hui; Li, Hao; Li, Long-Cheng | Cell research | 26902284 | 2016 Mar |
| The Mitochondrial-Derived Peptide Humanin Protects RPE Cells From Oxidative Stress, Senescence, and Mitochondrial Dysfunction. | Sreekumar, Parameswaran G; Ishikawa, Keijiro; Spee, Chris; Mehta, Hemal H; Wan, Junxiang; Yen, Kelvin; Cohen, Pinchas; Kannan, Ram; Hinton, David R | Investigative ophthalmology & visual science | 26990160 | 2016 Mar |
| Humanin: Functional Interfaces with IGF-I. | Xiao, J; Kim, S-J; Cohen, P; Yen, K | Growth hormone & IGF research : official journal of the Growth Hormone Research Society and the International IGF Research Society | 27082450 | 2016 Aug |
| Allosteric Inhibition of Bcr-Abl Kinase by High Affinity Monobody Inhibitors Directed to the Src Homology 2 (SH2)-Kinase Interface. | Wojcik, John; Lamontanara, Allan Joaquim; Grabe, Grzegorz; Koide, Akiko; Akin, Louesa; Gerig, Barbara; Hantschel, Oliver; Koide, Shohei | The Journal of biological chemistry | 26912659 | 2016 Apr 15 |
| Intravitreal Administration of Human Bone Marrow CD34+ Stem Cells in a Murine Model of Retinal Degeneration. | Moisseiev, Elad; Smit-McBride, Zeljka; Oltjen, Sharon; Zhang, Pengfei; Zawadzki, Robert J; Motta, Monica; Murphy, Christopher J; Cary, Whitney; Annett, Geralyn; Nolta, Jan A; Park, Susanna S | Investigative ophthalmology & visual science | 27537262 | 2016 Aug 01 |
| Patterns of Feedback on the Bridge to Independence: A Qualitative Thematic Analysis of NIH Mentored Career Development Award Application Critiques. | Kaatz, Anna; Dattalo, Melissa; Regner, Caitlin; Filut, Amarette; Carnes, Molly | Journal of women's health (2002) | 26418619 | 2016 Jan |
| Functional and topological diversity of LOV domain photoreceptors. | Glantz, Spencer T; Carpenter, Eric J; Melkonian, Michael; Gardner, Kevin H; Boyden, Edward S; Wong, Gane Ka-Shu; Chow, Brian Y | Proceedings of the National Academy of Sciences of the United States of America | 26929367 | 2016 Mar 15 |
| Spatiotemporal Dynamics of Dexmedetomidine-Induced Electroencephalogram Oscillations. | Akeju, Oluwaseun; Kim, Seong-Eun; Vazquez, Rafael; Rhee, James; Pavone, Kara J; Hobbs, Lauren E; Purdon, Patrick L; Brown, Emery N | PloS one | 27711165 | 2016 |
| In vitro selection and amplification protocols for isolation of aptameric sensors for small molecules. | Yang, Kyung-Ae; Pei, Renjun; Stojanovic, Milan N | Methods (San Diego, Calif.) | 27155227 | 2016 Aug 15 |
| Integrated Microfluidic Isolation of Aptamers Using Electrophoretic Oligonucleotide Manipulation. | Kim, Jinho; Olsen, Timothy R; Zhu, Jing; Hilton, John P; Yang, Kyung-Ae; Pei, Renjun; Stojanovic, Milan N; Lin, Qiao | Scientific reports | 27217242 | 2016 05 24 |
| The RNA-binding protein vigilin regulates VLDL secretion through modulation of Apob mRNA translation. | Mobin, Mehrpouya B; Gerstberger, Stefanie; Teupser, Daniel; Campana, Benedetta; Charisse, Klaus; Heim, Markus H; Manoharan, Muthiah; Tuschl, Thomas; Stoffel, Markus | Nature communications | 27665711 | 2016 Sep 26 |
| Interconnected network motifs control podocyte morphology and kidney function. | Azeloglu, Evren U; Hardy, Simon V; Eungdamrong, Narat John; Chen, Yibang; Jayaraman, Gomathi; Chuang, Peter Y; Fang, Wei; Xiong, Huabao; Neves, Susana R; Jain, Mohit R; Li, Hong; Ma'ayan, Avi; Gordon, Ronald E; He, John Cijiang; Iyengar, Ravi | Science signaling | 24497609 | 2014 Feb 4 |
| Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells. | Wu, Xuebing; Scott, David A; Kriz, Andrea J; Chiu, Anthony C; Hsu, Patrick D; Dadon, Daniel B; Cheng, Albert W; Trevino, Alexandro E; Konermann, Silvana; Chen, Sidi; Jaenisch, Rudolf; Zhang, Feng; Sharp, Phillip A | Nature biotechnology | 24752079 | 2014 Jul |
| Development and applications of CRISPR-Cas9 for genome engineering. | Hsu, Patrick D; Lander, Eric S; Zhang, Feng | Cell | 24906146 | 2014 Jun 05 |
| Permanent alteration of PCSK9 with in vivo CRISPR-Cas9 genome editing. | Ding, Qiurong; Strong, Alanna; Patel, Kevin M; Ng, Sze-Ling; Gosis, Bridget S; Regan, Stephanie N; Cowan, Chad A; Rader, Daniel J; Musunuru, Kiran | Circulation research | 24916110 | 2014 Aug 15 |
| Plug-and-play fluorophores extend the spectral properties of Spinach. | Song, Wenjiao; Strack, Rita L; Svensen, Nina; Jaffrey, Samie R | Journal of the American Chemical Society | 24393009 | 2014 Jan 29 |
| Multiplexed 3D cellular super-resolution imaging with DNA-PAINT and Exchange-PAINT. | Jungmann, Ralf; Avendaño, Maier S; Woehrstein, Johannes B; Dai, Mingjie; Shih, William M; Yin, Peng | Nature methods | 24487583 | 2014 Mar |
| Human retinal progenitor cell transplantation preserves vision. | Luo, Jing; Baranov, Petr; Patel, Sherrina; Ouyang, Hong; Quach, John; Wu, Frances; Qiu, Austin; Luo, Hongrong; Hicks, Caroline; Zeng, Jing; Zhu, Jing; Lu, Jessica; Sfeir, Nicole; Wen, Cindy; Zhang, Meixia; Reade, Victoria; Patel, Sara; Sinden, John; Sun, Xiaodong; Shaw, Peter; Young, Michael; Zhang, Kang | The Journal of biological chemistry | 24407289 | 2014 Mar 07 |
| Demystifying the nuclear function of Argonaute proteins. | Huang, Vera; Li, Long-Cheng | RNA biology | 24384674 | 2014 |
| RNAa in action: from the exception to the norm. | Guo, Dan; Barry, Liam; Lin, Sharon Szu Hua; Huang, Vera; Li, Long-Cheng | RNA biology | 25602906 | 2014 |
| The kinase regulator mob1 acts as a patterning protein for stentor morphogenesis. | Slabodnick, Mark M; Ruby, J Graham; Dunn, Joshua G; Feldman, Jessica L; DeRisi, Joseph L; Marshall, Wallace F | PLoS biology | 24823688 | 2014 May |
| Argininosuccinate lyase in enterocytes protects from development of necrotizing enterocolitis. | Premkumar, M H; Sule, G; Nagamani, S C; Chakkalakal, S; Nordin, A; Jain, M; Ruan, M Z; Bertin, T; Dawson, B; Zhang, J; Schady, D; Bryan, N S; Campeau, P M; Erez, A; Lee, B | American journal of physiology. Gastrointestinal and liver physiology | 24904080 | 2014 Aug 1 |
| Discovering aptamers by cell-SELEX against human soluble growth factors ectopically expressed on yeast cell surface. | Meng, Hsien-Wei; Pagano, John M; White, Brian S; Toyoda, Yoshiko; Min, Irene M; Craighead, Harold G; Shalloway, David; Lis, John T; Xiao, Kai; Jin, Moonsoo M | PloS one | 24675636 | 2014 |
| Comprehensive analysis of RNA-protein interactions by high-throughput sequencing-RNA affinity profiling. | Tome, Jacob M; Ozer, Abdullah; Pagano, John M; Gheba, Dan; Schroth, Gary P; Lis, John T | Nature methods | 24809628 | 2014 Jun |
| Intein applications: from protein purification and labeling to metabolic control methods. | Wood, David W; Camarero, Julio A | The Journal of biological chemistry | 24700459 | 2014 May 23 |
| Insights into the molecular flexibility of θ-defensins by NMR relaxation analysis. | Conibear, Anne C; Wang, Conan K; Bi, Tao; Rosengren, K Johan; Camarero, Julio A; Craik, David J | The journal of physical chemistry. B | 25375365 | 2014 Dec 11 |
| Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation. | Yasui, Norihisa; Findlay, Greg M; Gish, Gerald D; Hsiung, Marilyn S; Huang, Jin; Tucholska, Monika; Taylor, Lorne; Smith, Louis; Boldridge, W Clifford; Koide, Akiko; Pawson, Tony; Koide, Shohei | Molecular cell | 24910098 | 2014 Jun 19 |
| Isotropic 3D Super-resolution Imaging with a Self-bending Point Spread Function. | Jia, Shu; Vaughan, Joshua C; Zhuang, Xiaowei | Nature photonics | 25383090 | 2014 |
| Interactions between RNA polymerase and the "core recognition element" counteract pausing. | Vvedenskaya, Irina O; Vahedian-Movahed, Hanif; Bird, Jeremy G; Knoblauch, Jared G; Goldman, Seth R; Zhang, Yu; Ebright, Richard H; Nickels, Bryce E | Science (New York, N.Y.) | 24926020 | 2014 Jun 13 |
| Expression of arginase I in myeloid cells limits control of residual disease after radiation therapy of tumors in mice. | Crittenden, Marka R; Savage, Talicia; Cottam, Benjamin; Baird, Jason; Rodriguez, Paulo C; Newell, Pippa; Young, Kristina; Jackson, Andrew M; Gough, Michael J | Radiation research | 24992164 | 2014 Aug |
| Arginase I levels are decreased in the plasma of pediatric patients with atopic dermatitis. | Dimitriades, Victoria; Rodriguez, Paulo C; Zabaleta, Jovanny; Ochoa, Augusto C | Annals of allergy, asthma & immunology : official publication of the American College of Allergy, Asthma, & Immunology | 25027824 | 2014 Sep |
| Targeted chromatin profiling reveals novel enhancers in Ig H and Ig L chain Loci. | Predeus, Alexander V; Gopalakrishnan, Suhasni; Huang, Yue; Tang, Jun; Feeney, Ann J; Oltz, Eugene M; Artyomov, Maxim N | Journal of immunology (Baltimore, Md. : 1950) | 24353267 | 2014 Feb 01 |
| Development, optimization, and validation of novel anti-TEM1/CD248 affinity agent for optical imaging in cancer. | Li, Chunsheng; Wang, Junying; Hu, Jia; Feng, Yi; Hasegawa, Kosei; Peng, Xiaohui; Duan, Xingmei; Zhao, Aizhi; Mikitsh, John L; Muzykantov, Vladimir R; Chacko, Ann-Marie; Pryma, Daniel A; Dunn, Steven M; Coukos, George | Oncotarget | 25051365 | 2014 Aug 30 |
| Sirtuin inhibitors as anticancer agents. | Hu, Jing; Jing, Hui; Lin, Hening | Future medicinal chemistry | 24962284 | 2014 May |
| Removing batch effects from histopathological images for enhanced cancer diagnosis. | Kothari, Sonal; Phan, John H; Stokes, Todd H; Osunkoya, Adeboye O; Young, Andrew N; Wang, May D | IEEE journal of biomedical and health informatics | 24808220 | 2014 May |
| Intraoperative near-infrared imaging can distinguish cancer from normal tissue but not inflammation. | Holt, David; Okusanya, Olugbenga; Judy, Ryan; Venegas, Ollin; Jiang, Jack; DeJesus, Elizabeth; Eruslanov, Evgeniy; Quatromoni, Jon; Bhojnagarwala, Pratik; Deshpande, Charuhas; Albelda, Steven; Nie, Shuming; Singhal, Sunil | PloS one | 25072388 | 2014 |
| Compact and blinking-suppressed quantum dots for single-particle tracking in live cells. | Lane, Lucas A; Smith, Andrew M; Lian, Tianquan; Nie, Shuming | The journal of physical chemistry. B | 25157589 | 2014 Dec 11 |
| Development of the Human Mycobiome over the First Month of Life and across Body Sites. | Ward, Tonya L; Dominguez-Bello, Maria Gloria; Heisel, Tim; Al-Ghalith, Gabriel; Knights, Dan; Gale, Cheryl A | mSystems | 29546248 | 2018 May-Jun |
| Formation of arrays of planar, murine, intestinal crypts possessing a stem/proliferative cell compartment and differentiated cell zone. | Kim, Raehyun; Wang, Yuli; Hwang, Shee-Hwan J; Attayek, Peter J; Smiddy, Nicole M; Reed, Mark I; Sims, Christopher E; Allbritton, Nancy L | Lab on a chip | 29944153 | 2018 Jul 24 |
| Analysis of Interleukin 8 Secretion by a Stem-Cell-Derived Human-Intestinal-Epithelial-Monolayer Platform. | Wang, Yuli; Kim, Raehyun; Hwang, Shee-Hwan J; Dutton, Johanna; Sims, Christopher E; Allbritton, Nancy L | Analytical chemistry | 30199234 | 2018 10 02 |
| The evolution of CpG density and lifespan in conserved primate and mammalian promoters. | McLain, Adam T; Faulk, Christopher | Aging | 29661983 | 2018 Apr 14 |
| Corticoamygdala Transfer of Socially Derived Information Gates Observational Learning. | Allsop, Stephen A; Wichmann, Romy; Mills, Fergil; Burgos-Robles, Anthony; Chang, Chia-Jung; Felix-Ortiz, Ada C; Vienne, Alienor; Beyeler, Anna; Izadmehr, Ehsan M; Glober, Gordon; Cum, Meghan I; Stergiadou, Johanna; Anandalingam, Kavitha K; Farris, Kathryn; Namburi, Praneeth; Leppla, Christopher A; Weddington, Javier C; Nieh, Edward H; Smith, Anne C; Ba, Demba; Brown, Emery N; Tye, Kay M | Cell | 29731170 | 2018 05 31 |
| SSMART: sequence-structure motif identification for RNA-binding proteins. | Munteanu, Alina; Mukherjee, Neelanjan; Ohler, Uwe | Bioinformatics (Oxford, England) | 29893814 | 2018 12 01 |
| Peridinin Is an Exceptionally Potent and Membrane-Embedded Inhibitor of Bilayer Lipid Peroxidation. | Haley, Hannah M S; Hill, Adam G; Greenwood, Alexander I; Woerly, Eric M; Rienstra, Chad M; Burke, Martin D | Journal of the American Chemical Society | 30388000 | 2018 11 14 |
| Calcium-Induced Lipid Nanocluster Structures: Sculpturing of the Plasma Membrane. | Hallock, Michael J; Greenwood, Alexander I; Wang, Yan; Morrissey, James H; Tajkhorshid, Emad; Rienstra, Chad M; Pogorelov, Taras V | Biochemistry | 30456950 | 2018 12 18 |
| An evolutionary hotspot defines functional differences between CRYPTOCHROMES. | Rosensweig, Clark; Reynolds, Kimberly A; Gao, Peng; Laothamatas, Isara; Shan, Yongli; Ranganathan, Rama; Takahashi, Joseph S; Green, Carla B | Nature communications | 29556064 | 2018 Mar 19 |
| Coevolution-based inference of amino acid interactions underlying protein function. | Salinas, Victor H; Ranganathan, Rama | eLife | 30024376 | 2018 Jul 20 |
| Refining the Application of Microbial Lipids as Tracers of Staphylococcus aureus Growth Rates in Cystic Fibrosis Sputum. | Neubauer, Cajetan; Kasi, Ajay S; Grahl, Nora; Sessions, Alex L; Kopf, Sebastian H; Kato, Roberta; Hogan, Deborah A; Newman, Dianne K | Journal of bacteriology | 30249710 | 2018 12 15 |
| Chlorate Specifically Targets Oxidant-Starved, Antibiotic-Tolerant Populations of Pseudomonas aeruginosa Biofilms. | Spero, Melanie A; Newman, Dianne K | mBio | 30254119 | 2018 09 25 |
| Identifying Candidates for Advanced Hemodynamic Support After Cardiac Arrest. | Bartos, Jason A; Doonan, Aaron L; Yannopoulos, Demetris | Circulation | 29335287 | 2018 Jan 16 |
| Inferring single-trial neural population dynamics using sequential auto-encoders. | Pandarinath, Chethan; O'Shea, Daniel J; Collins, Jasmine; Jozefowicz, Rafal; Stavisky, Sergey D; Kao, Jonathan C; Trautmann, Eric M; Kaufman, Matthew T; Ryu, Stephen I; Hochberg, Leigh R; Henderson, Jaimie M; Shenoy, Krishna V; Abbott, L F; Sussillo, David | Nature methods | 30224673 | 2018 10 |
| Digital Museum of Retinal Ganglion Cells with Dense Anatomy and Physiology. | Bae, J Alexander; Mu, Shang; Kim, Jinseop S; Turner, Nicholas L; Tartavull, Ignacio; Kemnitz, Nico; Jordan, Chris S; Norton, Alex D; Silversmith, William M; Prentki, Rachel; Sorek, Marissa; David, Celia; Jones, Devon L; Bland, Doug; Sterling, Amy L R; Park, Jungman; Briggman, Kevin L; Seung, H Sebastian; Eyewirers | Cell | 29775596 | 2018 05 17 |
| The logic of single-cell projections from visual cortex. | Han, Yunyun; Kebschull, Justus M; Campbell, Robert A A; Cowan, Devon; Imhof, Fabia; Zador, Anthony M; Mrsic-Flogel, Thomas D | Nature | 29590093 | 2018 04 05 |
| Miniaturized, Battery-Free Optofluidic Systems with Potential for Wireless Pharmacology and Optogenetics. | Noh, Kyung Nim; Park, Sung Il; Qazi, Raza; Zou, Zhanan; Mickle, Aaron D; Grajales-Reyes, Jose G; Jang, Kyung-In; Gereau 4th, Robert W; Xiao, Jianliang; Rogers, John A; Jeong, Jae-Woong | Small (Weinheim an der Bergstrasse, Germany) | 29215787 | 2018 Jan |
| Differential Regulation of Bladder Pain and Voiding Function by Sensory Afferent Populations Revealed by Selective Optogenetic Activation. | DeBerry, Jennifer J; Samineni, Vijay K; Copits, Bryan A; Sullivan, Christopher J; Vogt, Sherri K; Albers, Kathryn M; Davis, Brian M; Gereau IV, Robert W | Frontiers in integrative neuroscience | 29483864 | 2018 |
| Predicting age from the transcriptome of human dermal fibroblasts. | Fleischer, Jason G; Schulte, Roberta; Tsai, Hsiao H; Tyagi, Swati; Ibarra, Arkaitz; Shokhirev, Maxim N; Huang, Ling; Hetzer, Martin W; Navlakha, Saket | Genome biology | 30567591 | 2018 12 20 |
| Subcellular organization of UBE3A in human cerebral cortex. | Burette, Alain C; Judson, Matthew C; Li, Alissa N; Chang, Edward F; Seeley, William W; Philpot, Benjamin D; Weinberg, Richard J | Molecular autism | 30364390 | 2018 |
| A community-developed open-source computational ecosystem for big neuro data. | Vogelstein, Joshua T; Perlman, Eric; Falk, Benjamin; Baden, Alex; Gray Roncal, William; Chandrashekhar, Vikram; Collman, Forrest; Seshamani, Sharmishtaa; Patsolic, Jesse L; Lillaney, Kunal; Kazhdan, Michael; Hider Jr, Robert; Pryor, Derek; Matelsky, Jordan; Gion, Timothy; Manavalan, Priya; Wester, Brock; Chevillet, Mark; Trautman, Eric T; Khairy, Khaled; Bridgeford, Eric; Kleissas, Dean M; Tward, Daniel J; Crow, Ailey K; Hsueh, Brian; Wright, Matthew A; Miller, Michael I; Smith, Stephen J; Vogelstein, R Jacob; Deisseroth, Karl; Burns, Randal | Nature methods | 30377345 | 2018 11 |
| The T Cell Antigen Receptor α Transmembrane Domain Coordinates Triggering through Regulation of Bilayer Immersion and CD3 Subunit Associations. | Brazin, Kristine N; Mallis, Robert J; Boeszoermenyi, Andras; Feng, Yinnian; Yoshizawa, Akihiro; Reche, Pedro A; Kaur, Pavanjeet; Bi, Kevin; Hussey, Rebecca E; Duke-Cohan, Jonathan S; Song, Likai; Wagner, Gerhard; Arthanari, Haribabu; Lang, Matthew J; Reinherz, Ellis L | Immunity | 30389415 | 2018 11 20 |
| Emergence of two near-infrared windows for in vivo and intraoperative SERS. | Lane, Lucas A; Xue, Ruiyang; Nie, Shuming | Current opinion in chemical biology | 29631122 | 2018 08 |
| Analysis of Genetically Diverse Macrophages Reveals Local and Domain-wide Mechanisms that Control Transcription Factor Binding and Function. | Link, Verena M; Duttke, Sascha H; Chun, Hyun B; Holtman, Inge R; Westin, Emma; Hoeksema, Marten A; Abe, Yohei; Skola, Dylan; Romanoski, Casey E; Tao, Jenhan; Fonseca, Gregory J; Troutman, Ty D; Spann, Nathanael J; Strid, Tobias; Sakai, Mashito; Yu, Miao; Hu, Rong; Fang, Rongxin; Metzler, Dirk; Ren, Bing; Glass, Christopher K | Cell | 29779944 | 2018 06 14 |
| Label-free cell nuclear imaging by Grüneisen relaxation photoacoustic microscopy. | Liu, Xiaowei; Wong, Terence T W; Shi, Junhui; Ma, Jun; Yang, Qing; Wang, Lihong V | Optics letters | 29444034 | 2018 Feb 15 |
| Dual-axis illumination for virtually augmenting the detection view of optical-resolution photoacoustic microscopy. | Hsu, Hsun-Chia; Li, Lei; Yao, Junjie; Wong, Terence T W; Shi, Junhui; Chen, Ruimin; Zhou, Qifa; Wang, Lihong | Journal of biomedical optics | 29981225 | 2018 Jul |
| Dichroism-sensitive photoacoustic computed tomography. | Qu, Yuan; Li, Lei; Shen, Yuecheng; Wei, Xiaoming; Wong, Terence T W; Hu, Peng; Yao, Junjie; Maslov, Konstantin; Wang, Lihong V | Optica | 30820444 | 2018 Apr 20 |
| Efficient proximity labeling in living cells and organisms with TurboID. | Branon, Tess C; Bosch, Justin A; Sanchez, Ariana D; Udeshi, Namrata D; Svinkina, Tanya; Carr, Steven A; Feldman, Jessica L; Perrimon, Norbert; Ting, Alice Y | Nature biotechnology | 30125270 | 2018 Oct |
| Adult hepatocytes direct liver organogenesis through non-parenchymal cell recruitment in the kidney. | Utoh, Rie; Komori, Junji; Kuge, Hiroyuki; Tatsumi, Kohei; Yamada, Masumi; Hirohashi, Shinji; Tsutsumi, Masahiro; Amanuma, Toshihiro; Yoshioka, Akira; Nakajima, Yoshiyuki; Wake, Kenjiro; Okano, Teruo; Lagasse, Eric; Ohashi, Kazuo | Journal of hepatology | 29288124 | 2018 04 |
| Brief exposure to obesogenic diet disrupts brain dopamine networks. | Barry, Robert L; Byun, Nellie E; Williams, Jason M; Siuta, Michael A; Tantawy, Mohammed N; Speed, Nicole K; Saunders, Christine; Galli, Aurelio; Niswender, Kevin D; Avison, Malcolm J | PloS one | 29698491 | 2018 |
| Humanity in a Dish: Population Genetics with iPSCs. | Warren, Curtis R; Cowan, Chad A | Trends in cell biology | 29054332 | 2018 Jan |
| Formation of Human Colonic Crypt Array by Application of Chemical Gradients Across a Shaped Epithelial Monolayer. | Wang, Yuli; Kim, Raehyun; Gunasekara, Dulan B; Reed, Mark I; DiSalvo, Matthew; Nguyen, Daniel L; Bultman, Scott J; Sims, Christopher E; Magness, Scott T; Allbritton, Nancy L | Cellular and molecular gastroenterology and hepatology | 29693040 | 2018 |
| [11C]Para-Aminobenzoic Acid: A Positron Emission Tomography Tracer Targeting Bacteria-Specific Metabolism. | Mutch, Christopher A; Ordonez, Alvaro A; Qin, Hecong; Parker, Matthew; Bambarger, Lauren E; Villanueva-Meyer, Javier E; Blecha, Joseph; Carroll, Valerie; Taglang, Celine; Flavell, Robert; Sriram, Renuka; VanBrocklin, Henry; Rosenberg, Oren; Ohliger, Michael A; Jain, Sanjay K; Neumann, Kiel D; Wilson, David M | ACS infectious diseases | 29712422 | 2018 Jul 13 |
| Evolutionary conservation of DNA methylation in CpG sites within ultraconserved noncoding elements. | Colwell, Mathia; Drown, Melissa; Showel, Kelly; Drown, Chelsea; Palowski, Amanda; Faulk, Christopher | Epigenetics | 29372669 | 2018 |
| High prevalence of clonal monoallelic expression. | Vigneau, Sébastien; Vinogradova, Svetlana; Savova, Virginia; Gimelbrant, Alexander | Nature genetics | 30082785 | 2018 09 |
| Structure of the alternative complex III in a supercomplex with cytochrome oxidase. | Sun, Chang; Benlekbir, Samir; Venkatakrishnan, Padmaja; Wang, Yuhang; Hong, Sangjin; Hosler, Jonathan; Tajkhorshid, Emad; Rubinstein, John L; Gennis, Robert B | Nature | 29695868 | 2018 May |
| Direct protein-lipid interactions shape the conformational landscape of secondary transporters. | Martens, Chloe; Shekhar, Mrinal; Borysik, Antoni J; Lau, Andy M; Reading, Eamonn; Tajkhorshid, Emad; Booth, Paula J; Politis, Argyris | Nature communications | 30297844 | 2018 10 08 |
| Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling. | Nir, Guy; Farabella, Irene; Pérez Estrada, Cynthia; Ebeling, Carl G; Beliveau, Brian J; Sasaki, Hiroshi M; Lee, S Dean; Nguyen, Son C; McCole, Ruth B; Chattoraj, Shyamtanu; Erceg, Jelena; AlHaj Abed, Jumana; Martins, Nuno M C; Nguyen, Huy Q; Hannan, Mohammed A; Russell, Sheikh; Durand, Neva C; Rao, Suhas S P; Kishi, Jocelyn Y; Soler-Vila, Paula; Di Pierro, Michele; Onuchic, José N; Callahan, Steven P; Schreiner, John M; Stuckey, Jeff A; Yin, Peng; Aiden, Erez Lieberman; Marti-Renom, Marc A; Wu, C-Ting | PLoS genetics | 30586358 | 2018 Dec |
| Microglia-Mediated Neuroprotection, TREM2, and Alzheimer's Disease: Evidence From Optical Imaging. | Condello, Carlo; Yuan, Peng; Grutzendler, Jaime | Biological psychiatry | 29169609 | 2018 Feb 15 |
| Transdifferentiation of human adult peripheral blood T cells into neurons. | Tanabe, Koji; Ang, Cheen Euong; Chanda, Soham; Olmos, Victor Hipolito; Haag, Daniel; Levinson, Douglas F; Südhof, Thomas C; Wernig, Marius | Proceedings of the National Academy of Sciences of the United States of America | 29866841 | 2018 Jun 19 |
| Retinoic Acid Receptor RARα-Dependent Synaptic Signaling Mediates Homeostatic Synaptic Plasticity at the Inhibitory Synapses of Mouse Visual Cortex. | Zhong, Lei R; Chen, Xin; Park, Esther; Südhof, Thomas C; Chen, Lu | The Journal of neuroscience : the official journal of the Society for Neuroscience | 30355624 | 2018 12 05 |
| Spontaneous CRISPR loci generation in vivo by non-canonical spacer integration. | Nivala, Jeff; Shipman, Seth L; Church, George M | Nature microbiology | 29379209 | 2018 Mar |
| Modern Machine Learning as a Benchmark for Fitting Neural Responses. | Benjamin, Ari S; Fernandes, Hugo L; Tomlinson, Tucker; Ramkumar, Pavan; VerSteeg, Chris; Chowdhury, Raeed H; Miller, Lee E; Kording, Konrad P | Frontiers in computational neuroscience | 30072887 | 2018 |
| Neurons derived from patients with bipolar disorder divide into intrinsically different sub-populations of neurons, predicting the patients' responsiveness to lithium. | Stern, S; Santos, R; Marchetto, M C; Mendes, A P D; Rouleau, G A; Biesmans, S; Wang, Q-W; Yao, J; Charnay, P; Bang, A G; Alda, M; Gage, F H | Molecular psychiatry | 28242870 | 2018 Jun |
| An in vitro model of lissencephaly: expanding the role of DCX during neurogenesis. | Shahsavani, M; Pronk, R J; Falk, R; Lam, M; Moslem, M; Linker, S B; Salma, J; Day, K; Schuster, J; Anderlid, B-M; Dahl, N; Gage, F H; Falk, A | Molecular psychiatry | 28924182 | 2018 07 |
| Early life experience drives structural variation of neural genomes in mice. | Bedrosian, Tracy A; Quayle, Carolina; Novaresi, Nicole; Gage, Fred H | Science (New York, N.Y.) | 29567711 | 2018 Mar 23 |
| Patch-Seq Protocol to Analyze the Electrophysiology, Morphology and Transcriptome of Whole Single Neurons Derived From Human Pluripotent Stem Cells. | van den Hurk, Mark; Erwin, Jennifer A; Yeo, Gene W; Gage, Fred H; Bardy, Cedric | Frontiers in molecular neuroscience | 30147644 | 2018 |
| Three-dimensional intact-tissue sequencing of single-cell transcriptional states. | Wang, Xiao; Allen, William E; Wright, Matthew A; Sylwestrak, Emily L; Samusik, Nikolay; Vesuna, Sam; Evans, Kathryn; Liu, Cindy; Ramakrishnan, Charu; Liu, Jia; Nolan, Garry P; Bava, Felice-Alessio; Deisseroth, Karl | Science (New York, N.Y.) | 29930089 | 2018 Jul 27 |
| Mapping a functional cancer genome atlas of tumor suppressors in mouse liver using AAV-CRISPR-mediated direct in vivo screening. | Wang, Guangchuan; Chow, Ryan D; Ye, Lupeng; Guzman, Christopher D; Dai, Xiaoyun; Dong, Matthew B; Zhang, Feng; Sharp, Phillip A; Platt, Randall J; Chen, Sidi | Science advances | 29503867 | 2018 Feb |
| Field-deployable viral diagnostics using CRISPR-Cas13. | Myhrvold, Cameron; Freije, Catherine A; Gootenberg, Jonathan S; Abudayyeh, Omar O; Metsky, Hayden C; Durbin, Ann F; Kellner, Max J; Tan, Amanda L; Paul, Lauren M; Parham, Leda A; Garcia, Kimberly F; Barnes, Kayla G; Chak, Bridget; Mondini, Adriano; Nogueira, Mauricio L; Isern, Sharon; Michael, Scott F; Lorenzana, Ivette; Yozwiak, Nathan L; MacInnis, Bronwyn L; Bosch, Irene; Gehrke, Lee; Zhang, Feng; Sabeti, Pardis C | Science (New York, N.Y.) | 29700266 | 2018 Apr 27 |
| Extended-Depth 3D Super-Resolution Imaging Using Probe-Refresh STORM. | Lin, Danying; Gagnon, Lauren A; Howard, Marco D; Halpern, Aaron R; Vaughan, Joshua C | Biophysical journal | 29694874 | 2018 Apr 24 |
| Switchable Fluorophores for Single-Molecule Localization Microscopy. | Li, Honglin; Vaughan, Joshua C | Chemical reviews | 30221931 | 2018 Sep 26 |
| Microtubule Acetylation Is Required for Mechanosensation in Drosophila. | Yan, Connie; Wang, Fei; Peng, Yun; Williams, Claire R; Jenkins, Brian; Wildonger, Jill; Kim, Hyeon-Jin; Perr, Jonathan B; Vaughan, Joshua C; Kern, Megan E; Falvo, Michael R; O'Brien 3rd, E Timothy; Superfine, Richard; Tuthill, John C; Xiang, Yang; Rogers, Stephen L; Parrish, Jay Z | Cell reports | 30355484 | 2018 10 23 |
| ERAASR: an algorithm for removing electrical stimulation artifacts from multielectrode array recordings. | O'Shea, Daniel J; Shenoy, Krishna V | Journal of neural engineering | 29265009 | 2018 04 |
| Differential 3' Processing of Specific Transcripts Expands Regulatory and Protein Diversity Across Neuronal Cell Types. | Jereb, Saša; Hwang, Hun-Way; Van Otterloo, Eric; Govek, Eve-Ellen; Fak, John J; Yuan, Yuan; Hatten, Mary E; Darnell, Robert B | eLife | 29578408 | 2018 03 26 |
| Optogenetic Induction of Colonic Motility in Mice. | Hibberd, Timothy J; Feng, Jing; Luo, Jialie; Yang, Pu; Samineni, Vijay K; Gereau 4th, Robert W; Kelley, Nigel; Hu, Hongzhen; Spencer, Nick J | Gastroenterology | 29782847 | 2018 Aug |
| Intraoperative monitoring of neuromuscular function with soft, skin-mounted wireless devices. | Liu, Yuhao; Tian, Limei; Raj, Milan S; Cotton, Matthew; Ma, Yinji; Ma, Siyi; McGrane, Bryan; Pendharkar, Arjun V; Dahaleh, Nader; Olson, Lloyd; Luan, Haiwen; Block, Orin; Suleski, Brandon; Zhou, Yadong; Jayaraman, Chandrasekaran; Koski, Tyler; Aranyosi, A J; Wright, John A; Jayaraman, Arun; Huang, Yonggang; Ghaffari, Roozbeh; Kliot, Michel; Rogers, John A | NPJ digital medicine | 30882044 | 2018 |
| Abundant off-target edits from site-directed RNA editing can be reduced by nuclear localization of the editing enzyme. | Vallecillo-Viejo, Isabel C; Liscovitch-Brauer, Noa; Montiel-Gonzalez, Maria Fernanda; Eisenberg, Eli; Rosenthal, Joshua J C | RNA biology | 29099293 | 2018 01 02 |
| Towards bedside washing of stored red blood cells: a prototype of a simple apparatus based on microscale sedimentation in normal gravity. | Khanal, G; Huynh, R A; Torabian, K; Xia, H; Vörös, E; Shevkoplyas, S S | Vox sanguinis | 29067695 | 2018 Jan |
| LEM domain-containing protein 3 antagonizes TGFβ-SMAD2/3 signaling in a stiffness-dependent manner in both the nucleus and cytosol. | Chambers, Dwight M; Moretti, Leandro; Zhang, Jennifer J; Cooper, Spencer W; Chambers, Davis M; Santangelo, Philip J; Barker, Thomas H | The Journal of biological chemistry | 30108174 | 2018 10 12 |
| Fibroblasts: Diverse Cells Critical to Biomaterials Integration. | Hannan, Riley T; Peirce, Shayn M; Barker, Thomas H | ACS biomaterials science & engineering | 31440581 | 2018 Apr 09 |
| Combined immunomagnetic capture coupled with ultrasensitive plasmonic detection of circulating tumor cells in blood. | Shen, Weiyu; Song, Yi; Burklund, Alison; Le, Biao; Zhang, Ru; Wang, Lijie; Xi, Yong; Qian, Kun; Shen, Ting; Zhang, John X J | Biomedical microdevices | 30417219 | 2018 11 12 |
| Tpr regulates the total number of nuclear pore complexes per cell nucleus. | McCloskey, Asako; Ibarra, Arkaitz; Hetzer, Martin W | Genes & development | 30228202 | 2018 10 01 |
| Maturation of the gut microbiome and risk of asthma in childhood. | Stokholm, Jakob; Blaser, Martin J; Thorsen, Jonathan; Rasmussen, Morten A; Waage, Johannes; Vinding, Rebecca K; Schoos, Ann-Marie M; Kunøe, Asja; Fink, Nadia R; Chawes, Bo L; Bønnelykke, Klaus; Brejnrod, Asker D; Mortensen, Martin S; Al-Soud, Waleed Abu; Sørensen, Søren J; Bisgaard, Hans | Nature communications | 29321519 | 2018 Jan 10 |
| A highly adaptive microbiome-based association test for survival traits. | Koh, Hyunwook; Livanos, Alexandra E; Blaser, Martin J; Li, Huilin | BMC genomics | 29558893 | 2018 Mar 20 |
| Long-Term In Vivo Oxygen Sensors for Peripheral Artery Disease Monitoring. | Nichols, Scott P; Balaconis, Mary K; Gant, Rebecca M; Au-Yeung, Kit Y; Wisniewski, Natalie A | Advances in experimental medicine and biology | 30178370 | 2018 |
| Super-resolution Geometric Barcoding for Multiplexed miRNA Profiling. | Xu, Weidong; Yin, Peng; Dai, Mingjie | Angewandte Chemie (International ed. in English) | 30182521 | 2018 10 22 |
| Interactive Visualization of Hierarchically Structured Data. | Sankaran, Kris; Holmes, Susan | Journal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America | 30416327 | 2018 |
| Accommodation of Helical Imperfections in Rhodobacter sphaeroides Argonaute Ternary Complexes with Guide RNA and Target DNA. | Liu, Yiwei; Esyunina, Daria; Olovnikov, Ivan; Teplova, Marianna; Kulbachinskiy, Andrey; Aravin, Alexei A; Patel, Dinshaw J | Cell reports | 29996105 | 2018 07 10 |
| Species-independent contribution of ZBP1/DAI/DLM-1-triggered necroptosis in host defense against HSV1. | Guo, Hongyan; Gilley, Ryan P; Fisher, Amanda; Lane, Rebecca; Landsteiner, Vanessa J; Ragan, Katherine B; Dovey, Cole M; Carette, Jan E; Upton, Jason W; Mocarski, Edward S; Kaiser, William J | Cell death & disease | 30050136 | 2018 07 26 |
| Microparticle-mediated sequestration of cell-secreted proteins to modulate chondrocytic differentiation. | Rinker, Torri E; Philbrick, Brandon D; Hettiaratchi, Marian H; Smalley, David M; McDevitt, Todd C; Temenoff, Johnna S | Acta biomaterialia | 29292168 | 2018 03 01 |
| 3D reconstruction and standardization of the rat facial nucleus for precise mapping of vibrissal motor networks. | Guest, Jason M; Seetharama, Mythreya M; Wendel, Elizabeth S; Strick, Peter L; Oberlaender, Marcel | Neuroscience | 28958919 | 2018 Jan 01 |
| Systematic Functional Characterization of Human 21st Chromosome Orthologs in Caenorhabditis elegans. | Nordquist, Sarah K; Smith, Sofia R; Pierce, Jonathan T | G3 (Bethesda, Md.) | 29367452 | 2018 Mar 02 |
| Line excitation array detection fluorescence microscopy at 0.8 million frames per second. | Martin, Chris; Li, Tianqi; Hegarty, Evan; Zhao, Peisen; Mondal, Sudip; Ben-Yakar, Adela | Nature communications | 30374138 | 2018 10 29 |
| A Muscle Stem Cell Support Group: Coordinated Cellular Responses in Muscle Regeneration. | Wosczyna, Michael N; Rando, Thomas A | Developmental cell | 30016618 | 2018 Jul 16 |
| Interaction between epigenetic and metabolism in aging stem cells. | Brunet, Anne; Rando, Thomas A | Current opinion in cell biology | 28129586 | 2017 Apr |
| Survival of tissue-resident memory T cells requires exogenous lipid uptake and metabolism. | Pan, Youdong; Tian, Tian; Park, Chang Ook; Lofftus, Serena Y; Mei, Shenglin; Liu, Xing; Luo, Chi; O'Malley, John T; Gehad, Ahmed; Teague, Jessica E; Divito, Sherrie J; Fuhlbrigge, Robert; Puigserver, Pere; Krueger, James G; Hotamisligil, Gökhan S; Clark, Rachael A; Kupper, Thomas S | Nature | 28219080 | 2017 03 09 |
| Decitabine Priming Enhances Mucin 1 Inhibition Mediated Disruption of Redox Homeostasis in Cutaneous T-Cell Lymphoma. | Jain, Salvia; Washington, Abigail; Leaf, Rebecca Karp; Bhargava, Parul; Clark, Rachael A; Kupper, Thomas S; Stroopinsky, Dina; Pyzer, Athalia; Cole, Leandra; Nahas, Myrna; Apel, Arie; Rosenblatt, Jacalyn; Arnason, Jon; Kufe, Donald; Avigan, David | Molecular cancer therapeutics | 28729399 | 2017 10 |
| Long telomeres protect against age-dependent cardiac disease caused by NOTCH1 haploinsufficiency. | Theodoris, Christina V; Mourkioti, Foteini; Huang, Yu; Ranade, Sanjeev S; Liu, Lei; Blau, Helen M; Srivastava, Deepak | The Journal of clinical investigation | 28346225 | 2017 May 01 |
| Acute Dietary Restriction Acts via TOR, PP2A, and Myc Signaling to Boost Innate Immunity in Drosophila. | Lee, Jung-Eun; Rayyan, Morsi; Liao, Allison; Edery, Isaac; Pletcher, Scott D | Cell reports | 28700947 | 2017 07 11 |
| DNA vaccination protects mice against Zika virus-induced damage to the testes. | Griffin, Bryan D; Muthumani, Kar; Warner, Bryce M; Majer, Anna; Hagan, Mable; Audet, Jonathan; Stein, Derek R; Ranadheera, Charlene; Racine, Trina; De La Vega, Marc-Antoine; Piret, Jocelyne; Kucas, Stephanie; Tran, Kaylie N; Frost, Kathy L; De Graff, Christine; Soule, Geoff; Scharikow, Leanne; Scott, Jennifer; McTavish, Gordon; Smid, Valerie; Park, Young K; Maslow, Joel N; Sardesai, Niranjan Y; Kim, J Joseph; Yao, Xiao-Jian; Bello, Alexander; Lindsay, Robbin; Boivin, Guy; Booth, Stephanie A; Kobasa, Darwyn; Embury-Hyatt, Carissa; Safronetz, David; Weiner, David B; Kobinger, Gary P | Nature communications | 28589934 | 2017 Jun 07 |
| Safety and Immunogenicity of an Anti-Zika Virus DNA Vaccine - Preliminary Report. | Tebas, Pablo; Roberts, Christine C; Muthumani, Kar; Reuschel, Emma L; Kudchodkar, Sagar B; Zaidi, Faraz I; White, Scott; Khan, Amir S; Racine, Trina; Choi, Hyeree; Boyer, Jean; Park, Young K; Trottier, Sylvie; Remigio, Celine; Krieger, Diane; Spruill, Susan E; Bagarazzi, Mark; Kobinger, Gary P; Weiner, David B; Maslow, Joel N | The New England journal of medicine | 28976850 | 2017 Oct 04 |
| Exogenous lipid uptake induces metabolic and functional reprogramming of tumor-associated myeloid-derived suppressor cells. | Al-Khami, Amir A; Zheng, Liqin; Del Valle, Luis; Hossain, Fokhrul; Wyczechowska, Dorota; Zabaleta, Jovanny; Sanchez, Maria D; Dean, Matthew J; Rodriguez, Paulo C; Ochoa, Augusto C | Oncoimmunology | 29123954 | 2017 |
| Mouse cytomegalovirus M36 and M45 death suppressors cooperate to prevent inflammation resulting from antiviral programmed cell death pathways. | Daley-Bauer, Lisa P; Roback, Linda; Crosby, Lynsey N; McCormick, A Louise; Feng, Yanjun; Kaiser, William J; Mocarski, Edward S | Proceedings of the National Academy of Sciences of the United States of America | 28292903 | 2017 Mar 28 |
| A microengineered collagen scaffold for generating a polarized crypt-villus architecture of human small intestinal epithelium. | Wang, Yuli; Gunasekara, Dulan B; Reed, Mark I; DiSalvo, Matthew; Bultman, Scott J; Sims, Christopher E; Magness, Scott T; Allbritton, Nancy L | Biomaterials | 28288348 | 2017 Jun |
| The role of the microbiome in cancer development and therapy. | Bhatt, Aadra P; Redinbo, Matthew R; Bultman, Scott J | CA: a cancer journal for clinicians | 28481406 | 2017 Jul 08 |
| In Vitro Generation of Mouse Colon Crypts. | Wang, Yuli; Gunasekara, Dulan B; Attayek, Peter J; Reed, Mark I; DiSalvo, Matthew; Nguyen, Daniel L; Dutton, Johanna S; Lebhar, Michael S; Bultman, Scott J; Sims, Christopher E; Magness, Scott T; Allbritton, Nancy L | ACS biomaterials science & engineering | 30854421 | 2017 Oct 09 |
| Joint Bounding of Peaks Across Samples Improves Differential Analysis in Mass Spectrometry-Based Metabolomics. | Myint, Leslie; Kleensang, Andre; Zhao, Liang; Hartung, Thomas; Hansen, Kasper D | Analytical chemistry | 28221771 | 2017 Mar 21 |
| Implementation of HPV vaccination guidelines in a diverse population in Los Angeles: Results from an environmental scan of local HPV resources and needs. | Baezconde-Garbanati, Lourdes; Lienemann, Brianna A; Robles, Marisela; Johnson, Ethel; Sanchez, Kathleen; Singhal, Rita; Steinberg, Jane; Jaque, Jenny M; Pentz, Mary Ann; Gruber, Stephen | Vaccine | 28774559 | 2017 Sep 05 |
| MotifMark: Finding regulatory motifs in DNA sequences. | Hassanzadeh, Hamid Reza; Kolhe, Pushkar; Isbell, Charles L; Wang, May D | Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference | 29060747 | 2017 Jul |
| Engineering the pre-metastatic niche. | Aguado, Brian A; Bushnell, Grace G; Rao, Shreyas S; Jeruss, Jacqueline S; Shea, Lonnie D | Nature biomedical engineering | 28989814 | 2017 |
| Transgenic Expression of IL15 Improves Antiglioma Activity of IL13Rα2-CAR T Cells but Results in Antigen Loss Variants. | Krenciute, Giedre; Prinzing, Brooke L; Yi, Zhongzhen; Wu, Meng-Fen; Liu, Hao; Dotti, Gianpietro; Balyasnikova, Irina V; Gottschalk, Stephen | Cancer immunology research | 28550091 | 2017 Jul |
| Dry coupling for whole-body small-animal photoacoustic computed tomography. | Yeh, Chenghung; Li, Lei; Zhu, Liren; Xia, Jun; Li, Chiye; Chen, Wanyi; Garcia-Uribe, Alejandro; Maslov, Konstantin I; Wang, Lihong V | Journal of biomedical optics | 28241305 | 2017 Apr 01 |
| Multiview Hilbert transformation in full-ring transducer array-based photoacoustic computed tomography. | Li, Lei; Zhu, Liren; Shen, Yuecheng; Wang, Lihong V | Journal of biomedical optics | 28745385 | 2017 Jul 01 |
| Focusing light inside dynamic scattering media with millisecond digital optical phase conjugation. | Liu, Yan; Ma, Cheng; Shen, Yuecheng; Shi, Junhui; Wang, Lihong V | Optica | 28815194 | 2017 Feb |
| Label-free automated three-dimensional imaging of whole organs by microtomy-assisted photoacoustic microscopy. | Wong, Terence T W; Zhang, Ruiying; Zhang, Chi; Hsu, Hsun-Chia; Maslov, Konstantin I; Wang, Lidai; Shi, Junhui; Chen, Ruimin; Shung, K Kirk; Zhou, Qifa; Wang, Lihong V | Nature communications | 29123109 | 2017 11 09 |
| Electron microscopy using the genetically encoded APEX2 tag in cultured mammalian cells. | Martell, Jeffrey D; Deerinck, Thomas J; Lam, Stephanie S; Ellisman, Mark H; Ting, Alice Y | Nature protocols | 28796234 | 2017 Sep |
| Distinguishing potential bacteria-tumor associations from contamination in a secondary data analysis of public cancer genome sequence data. | Robinson, Kelly M; Crabtree, Jonathan; Mattick, John S A; Anderson, Kathleen E; Dunning Hotopp, Julie C | Microbiome | 28118849 | 2017 Jan 25 |
| Analysis of Hepatitis C Virus Particle Heterogeneity in Immunodeficient Human Liver Chimeric fah-/- Mice. | Andreo, Ursula; de Jong, Ype P; Scull, Margaret A; Xiao, Jing W; Vercauteren, Koen; Quirk, Corrine; Mommersteeg, Michiel C; Bergaya, Sonia; Menon, Arjun; Fisher, Edward A; Rice, Charles M | Cellular and molecular gastroenterology and hepatology | 28936471 | 2017 Nov |
| Learning Health Systems as Facilitators of Precision Medicine. | Ramsey, L B; Mizuno, T; Vinks, A A; Margolis, P A | Clinical pharmacology and therapeutics | 27984650 | 2017 Mar |
| Helicobacter pylori colonization and pregnancies complicated by preeclampsia, spontaneous prematurity, and small for gestational age birth. | den Hollander, Wouter J; Schalekamp-Timmermans, Sarah; Holster, I Lisanne; Jaddoe, Vincent W; Hofman, Albert; Moll, Henriëtte A; Perez-Perez, Guillermo I; Blaser, Martin J; Steegers, Eric A P; Kuipers, Ernst J | Helicobacter | 27786400 | 2017 Apr |
| Seasonal cycling in the gut microbiome of the Hadza hunter-gatherers of Tanzania. | Smits, Samuel A; Leach, Jeff; Sonnenburg, Erica D; Gonzalez, Carlos G; Lichtman, Joshua S; Reid, Gregor; Knight, Rob; Manjurano, Alphaxard; Changalucha, John; Elias, Joshua E; Dominguez-Bello, Maria Gloria; Sonnenburg, Justin L | Science (New York, N.Y.) | 28839072 | 2017 08 25 |
| Rapid intraoperative histology of unprocessed surgical specimens via fibre-laser-based stimulated Raman scattering microscopy. | Orringer, Daniel A; Pandian, Balaji; Niknafs, Yashar S; Hollon, Todd C; Boyle, Julianne; Lewis, Spencer; Garrard, Mia; Hervey-Jumper, Shawn L; Garton, Hugh J L; Maher, Cormac O; Heth, Jason A; Sagher, Oren; Wilkinson, D Andrew; Snuderl, Matija; Venneti, Sriram; Ramkissoon, Shakti H; McFadden, Kathryn A; Fisher-Hubbard, Amanda; Lieberman, Andrew P; Johnson, Timothy D; Xie, X Sunney; Trautman, Jay K; Freudiger, Christian W; Camelo-Piragua, Sandra | Nature biomedical engineering | 28955599 | 2017 |
| DNA-barcoded labeling probes for highly multiplexed Exchange-PAINT imaging. | Agasti, Sarit S; Wang, Yu; Schueder, Florian; Sukumar, Aishwarya; Jungmann, Ralf; Yin, Peng | Chemical science | 28451377 | 2017 Apr 01 |
| Complex cellular logic computation using ribocomputing devices. | Green, Alexander A; Kim, Jongmin; Ma, Duo; Silver, Pamela A; Collins, James J; Yin, Peng | Nature | 28746304 | 2017 08 03 |
| Multiplexed 3D super-resolution imaging of whole cells using spinning disk confocal microscopy and DNA-PAINT. | Schueder, Florian; Lara-Gutiérrez, Juanita; Beliveau, Brian J; Saka, Sinem K; Sasaki, Hiroshi M; Woehrstein, Johannes B; Strauss, Maximilian T; Grabmayr, Heinrich; Yin, Peng; Jungmann, Ralf | Nature communications | 29233999 | 2017 12 12 |
| Full Sequence Amino Acid Scanning of θ-Defensin RTD-1 Yields a Potent Anthrax Lethal Factor Protease Inhibitor. | Li, Yilong; Gould, Andrew; Aboye, Teshome; Bi, Tao; Breindel, Leonard; Shekhtman, Alexander; Camarero, Julio A | Journal of medicinal chemistry | 28151653 | 2017 Mar 09 |
| In vivo Evaluation of an Engineered Cyclotide as Specific CXCR4 Imaging Reagent. | Lesniak, Wojciech G; Aboye, Teshome; Chatterjee, Samit; Camarero, Julio A; Nimmagadda, Sridhar | Chemistry (Weinheim an der Bergstrasse, Germany) | 28771849 | 2017 Oct 17 |
| Cyclotides, a versatile ultrastable micro-protein scaffold for biotechnological applications. | Camarero, Julio A | Bioorganic & medicinal chemistry letters | 29110985 | 2017 Dec 01 |
| Selective Targeting of SH2 Domain-Phosphotyrosine Interactions of Src Family Tyrosine Kinases with Monobodies. | Kükenshöner, Tim; Schmit, Nadine Eliane; Bouda, Emilie; Sha, Fern; Pojer, Florence; Koide, Akiko; Seeliger, Markus; Koide, Shohei; Hantschel, Oliver | Journal of molecular biology | 28347651 | 2017 May 05 |
| A genetically encoded tool for manipulation of NADP+/NADPH in living cells. | Cracan, Valentin; Titov, Denis V; Shen, Hongying; Grabarek, Zenon; Mootha, Vamsi K | Nature chemical biology | 28805804 | 2017 Oct |
| Advances in bone marrow stem cell therapy for retinal dysfunction. | Park, Susanna S; Moisseiev, Elad; Bauer, Gerhard; Anderson, Johnathon D; Grant, Maria B; Zam, Azhar; Zawadzki, Robert J; Werner, John S; Nolta, Jan A | Progress in retinal and eye research | 27784628 | 2017 01 |
| Protective Effect of Intravitreal Administration of Exosomes Derived from Mesenchymal Stem Cells on Retinal Ischemia. | Moisseiev, Elad; Anderson, Johnathon D; Oltjen, Sharon; Goswami, Mayank; Zawadzki, Robert J; Nolta, Jan A; Park, Susanna S | Current eye research | 28636406 | 2017 10 |
| Sensitivity to Sevoflurane anesthesia is decreased in mice with a congenital deletion of Guanylyl Cyclase-1 alpha. | Nagasaka, Yasuko; Wepler, Martin; Thoonen, Robrecht; Sips, Patrick Y; Allen, Kaitlin; Graw, Jan A; Yao, Vincent; Burns, Sara M; Muenster, Stefan; Brouckaert, Peter; Miller, Keith; Solt, Ken; Buys, Emmanuel S; Ichinose, Fumito; Zapol, Warren M | BMC anesthesiology | 28615047 | 2017 Jun 14 |
| An Integrated Microfluidic SELEX Approach Using Combined Electrokinetic and Hydrodynamic Manipulation. | Olsen, Timothy; Zhu, Jing; Kim, Jinho; Pei, Renjun; Stojanovic, Milan N; Lin, Qiao | SLAS technology | 27418370 | 2017 02 |
| DND1 maintains germline stem cells via recruitment of the CCR4-NOT complex to target mRNAs. | Yamaji, Masashi; Jishage, Miki; Meyer, Cindy; Suryawanshi, Hemant; Der, Evan; Yamaji, Misaki; Garzia, Aitor; Morozov, Pavel; Manickavel, Sudhir; McFarland, Hannah L; Roeder, Robert G; Hafner, Markus; Tuschl, Thomas | Nature | 28297718 | 2017 Mar 23 |
| Women Are Less Likely Than Men to Be Full Professors in Cardiology: Why Does This Happen and How Can We Fix It? | Carnes, Molly; Bairey Merz, C Noel | Circulation | 28153988 | 2017 Feb 07 |
| 'Your comments are meaner than your score': score calibration talk influences intra- and inter-panel variability during scientific grant peer review. | Pier, Elizabeth L; Raclaw, Joshua; Kaatz, Anna; Brauer, Markus; Carnes, Molly; Nathan, Mitchell J; Ford, Cecilia E | Research Evaluation | 28458466 | 2017 Jan |
| Breaking the prejudice habit: Mechanisms, timecourse, and longevity. | Forscher, Patrick S; Mitamura, Chelsea; Dix, Emily L; Cox, William T L; Devine, Patricia G | Journal of experimental social psychology | 29225371 | 2017 Sep |
| Lipids and ions traverse the membrane by the same physical pathway in the nhTMEM16 scramblase. | Jiang, Tao; Yu, Kuai; Hartzell, H Criss; Tajkhorshid, Emad | eLife | 28917060 | 2017 09 16 |
| Polyphosphate granule biogenesis is temporally and functionally tied to cell cycle exit during starvation in Pseudomonas aeruginosa. | Racki, Lisa R; Tocheva, Elitza I; Dieterle, Michael G; Sullivan, Meaghan C; Jensen, Grant J; Newman, Dianne K | Proceedings of the National Academy of Sciences of the United States of America | 28265086 | 2017 Mar 21 |
| Identification of Fitness Determinants during Energy-Limited Growth Arrest in Pseudomonas aeruginosa. | Basta, David W; Bergkessel, Megan; Newman, Dianne K | mBio | 29184024 | 2017 11 28 |
| Envisioning a future for precision health psychology: innovative applied statistical approaches to N-of-1 studies. | Davidson, Karina W; Cheung, Ying Kuen | Health psychology review | 28651455 | 2017 Sep |
| Generation of pure GABAergic neurons by transcription factor programming. | Yang, Nan; Chanda, Soham; Marro, Samuele; Ng, Yi-Han; Janas, Justyna A; Haag, Daniel; Ang, Cheen Euong; Tang, Yunshuo; Flores, Quetzal; Mall, Moritz; Wapinski, Orly; Li, Mavis; Ahlenius, Henrik; Rubenstein, John L; Chang, Howard Y; Buylla, Arturo Alvarez; Südhof, Thomas C; Wernig, Marius | Nature methods | 28504679 | 2017 Jun |
| Could a Neuroscientist Understand a Microprocessor? | Jonas, Eric; Kording, Konrad Paul | PLoS computational biology | 28081141 | 2017 01 |
| A novel flexible cuff-like microelectrode for dual purpose, acute and chronic electrical interfacing with the mouse cervical vagus nerve. | Caravaca, A S; Tsaava, T; Goldman, L; Silverman, H; Riggott, G; Chavan, S S; Bouton, C; Tracey, K J; Desimone, R; Boyden, E S; Sohal, H S; Olofsson, P S | Journal of neural engineering | 28628030 | 2017 Dec |
| Genomic approaches to the assessment of human spina bifida risk. | Ross, M Elizabeth; Mason, Christopher E; Finnell, Richard H | Birth defects research | 27883265 | 2017 Jan 30 |
| Cell diversity and network dynamics in photosensitive human brain organoids. | Quadrato, Giorgia; Nguyen, Tuan; Macosko, Evan Z; Sherwood, John L; Min Yang, Sung; Berger, Daniel R; Maria, Natalie; Scholvin, Jorg; Goldman, Melissa; Kinney, Justin P; Boyden, Edward S; Lichtman, Jeff W; Williams, Ziv M; McCarroll, Steven A; Arlotta, Paola | Nature | 28445462 | 2017 05 04 |
| m6A mRNA modifications are deposited in nascent pre-mRNA and are not required for splicing but do specify cytoplasmic turnover. | Ke, Shengdong; Pandya-Jones, Amy; Saito, Yuhki; Fak, John J; Vågbø, Cathrine Broberg; Geula, Shay; Hanna, Jacob H; Black, Douglas L; Darnell Jr, James E; Darnell, Robert B | Genes & development | 28637692 | 2017 May 15 |
| Argonaute CLIP Defines a Deregulated miR-122-Bound Transcriptome that Correlates with Patient Survival in Human Liver Cancer. | Luna, Joseph M; Barajas, Juan M; Teng, Kun-Yu; Sun, Hui-Lung; Moore, Michael J; Rice, Charles M; Darnell, Robert B; Ghoshal, Kalpana | Molecular cell | 28735896 | 2017 Aug 03 |
| Nup98 recruits the Wdr82-Set1A/COMPASS complex to promoters to regulate H3K4 trimethylation in hematopoietic progenitor cells. | Franks, Tobias M; McCloskey, Asako; Shokirev, Maxim Nikolaievich; Benner, Chris; Rathore, Annie; Hetzer, Martin W | Genes & development | 29269482 | 2017 Nov 15 |
| Frontotemporal dementia with the V337M MAPT mutation: Tau-PET and pathology correlations. | Spina, Salvatore; Schonhaut, Daniel R; Boeve, Bradley F; Seeley, William W; Ossenkoppele, Rik; O'Neil, James P; Lazaris, Andreas; Rosen, Howard J; Boxer, Adam L; Perry, David C; Miller, Bruce L; Dickson, Dennis W; Parisi, Joseph E; Jagust, William J; Murray, Melissa E; Rabinovici, Gil D | Neurology | 28130473 | 2017 Feb 21 |
| Edge effect of strained bilayer nanofilms for tunable multistability and actuation. | Hu, N; Han, X; Huang, S; Grover, H M; Yu, X; Zhang, L N; Trase, I; Zhang, J X J; Zhang, L; Dong, L X; Chen, Z | Nanoscale | 28067396 | 2017 Mar 02 |
| MicroRNA-9 Couples Brain Neurogenesis and Angiogenesis. | Madelaine, Romain; Sloan, Steven A; Huber, Nina; Notwell, James H; Leung, Louis C; Skariah, Gemini; Halluin, Caroline; Paşca, Sergiu P; Bejerano, Gill; Krasnow, Mark A; Barres, Ben A; Mourrain, Philippe | Cell reports | 28813666 | 2017 08 15 |
| Rabies screen reveals GPe control of cocaine-triggered plasticity. | Beier, Kevin T; Kim, Christina K; Hoerbelt, Paul; Hung, Lin Wai; Heifets, Boris D; DeLoach, Katherine E; Mosca, Timothy J; Neuner, Sophie; Deisseroth, Karl; Luo, Liqun; Malenka, Robert C | Nature | 28902833 | 2017 09 21 |
| Genetic and neuronal regulation of sleep by neuropeptide VF. | Lee, Daniel A; Andreev, Andrey; Truong, Thai V; Chen, Audrey; Hill, Andrew J; Oikonomou, Grigorios; Pham, Uyen; Hong, Young K; Tran, Steven; Glass, Laura; Sapin, Viveca; Engle, Jae; Fraser, Scott E; Prober, David A | eLife | 29106375 | 2017 Nov 06 |
| Experiences with Deriva: An Asset Management Platform for Accelerating eScience. | Bugacov, Alejandro; Czajkowski, Karl; Kesselman, Carl; Kumar, Anoop; Schuler, Robert E; Tangmunarunkit, Hongsuda | Proceedings ... IEEE International Conference on eScience. IEEE International Conference on eScience | 29756001 | 2017 Oct |
| Multiplex gene editing by CRISPR-Cpf1 using a single crRNA array. | Zetsche, Bernd; Heidenreich, Matthias; Mohanraju, Prarthana; Fedorova, Iana; Kneppers, Jeroen; DeGennaro, Ellen M; Winblad, Nerges; Choudhury, Sourav R; Abudayyeh, Omar O; Gootenberg, Jonathan S; Wu, Wen Y; Scott, David A; Severinov, Konstantin; van der Oost, John; Zhang, Feng | Nature biotechnology | 27918548 | 2017 Jan |
| High-throughput, image-based screening of pooled genetic-variant libraries. | Emanuel, George; Moffitt, Jeffrey R; Zhuang, Xiaowei | Nature methods | 29083401 | 2017 Dec |
| Dermal γδ T Cells Do Not Freely Re-Circulate Out of Skin and Produce IL-17 to Promote Neutrophil Infiltration during Primary Contact Hypersensitivity. | Jiang, Xiaodong; Park, Chang Ook; Geddes Sweeney, Jenna; Yoo, Min Jae; Gaide, Olivier; Kupper, Thomas Seth | PloS one | 28081153 | 2017 |
| Bayesian Unidimensional Scaling for visualizing uncertainty in high dimensional datasets with latent ordering of observations. | Nguyen, Lan Huong; Holmes, Susan | BMC bioinformatics | 28929970 | 2017 Sep 13 |
| Understanding Immunity through the Lens of Disease Ecology. | Hedrick, Stephen M | Trends in immunology | 28882454 | 2017 Dec |
| Smad3 initiates oxidative stress and proteolysis that underlies diaphragm dysfunction during mechanical ventilation. | Tang, Huibin; L Kennedy, Catherine; Lee, Myung; Gao, Yang; Xia, Hui; Olguin, Francesca; Fraga, Danielle A; Ayers, Kelsey; Choi, Sehoon; Kim, Michael; Tehrani, Amir; Sowb, Yasser A; Rando, Thomas A; Shrager, Joseph B | Scientific reports | 29109401 | 2017 11 06 |
| Stress, overeating, and obesity: Insights from human studies and preclinical models. | Razzoli, Maria; Pearson, Carolyn; Crow, Scott; Bartolomucci, Alessandro | Neuroscience and biobehavioral reviews | 28292531 | 2017 May |
| Longevity is impacted by growth hormone action during early postnatal period. | Sun, Liou Y; Fang, Yimin; Patki, Amit; Koopman, Jacob Je; Allison, David B; Hill, Cristal M; Masternak, Michal M; Darcy, Justin; Wang, Jian; McFadden, Samuel; Bartke, Andrzej | eLife | 28675141 | 2017 Jul 04 |
| Competitive Protein Binding Influences Heparin-Based Modulation of Spatial Growth Factor Delivery for Bone Regeneration. | Hettiaratchi, Marian H; Chou, Catherine; Servies, Nicholas; Smeekens, Johanna M; Cheng, Albert; Esancy, Camden; Wu, Ronghu; McDevitt, Todd C; Guldberg, Robert E; Krishnan, Laxminarayanan | Tissue engineering. Part A | 28338419 | 2017 07 |
| Constitutive Signaling from an Engineered IL7 Receptor Promotes Durable Tumor Elimination by Tumor-Redirected T Cells. | Shum, Thomas; Omer, Bilal; Tashiro, Haruko; Kruse, Robert L; Wagner, Dimitrios L; Parikh, Kathan; Yi, Zhongzhen; Sauer, Tim; Liu, Daofeng; Parihar, Robin; Castillo, Paul; Liu, Hao; Brenner, Malcolm K; Metelitsa, Leonid S; Gottschalk, Stephen; Rooney, Cliona M | Cancer discovery | 28830878 | 2017 11 |
| Quantitative image reconstruction for total-body PET imaging using the 2-meter long EXPLORER scanner. | Zhang, Xuezhu; Zhou, Jian; Cherry, Simon R; Badawi, Ramsey D; Qi, Jinyi | Physics in medicine and biology | 28240215 | 2017 Mar 21 |
| Oxalobacter formigenes-associated host features and microbial community structures examined using the American Gut Project. | Liu, Menghan; Koh, Hyunwook; Kurtz, Zachary D; Battaglia, Thomas; PeBenito, Amanda; Li, Huilin; Nazzal, Lama; Blaser, Martin J | Microbiome | 28841836 | 2017 Aug 25 |
| A multivariate distance-based analytic framework for microbial interdependence association test in longitudinal study. | Zhang, Yilong; Han, Sung Won; Cox, Laura M; Li, Huilin | Genetic epidemiology | 28872698 | 2017 12 |
| The biodistribution of 5-[18F]fluoropyrazinamide in Mycobacterium tuberculosis-infected mice determined by positron emission tomography. | Zhang, Zhuo; Ordonez, Alvaro A; Smith-Jones, Peter; Wang, Hui; Gogarty, Kayla R; Daryaee, Fereidoon; Bambarger, Lauren E; Chang, Yong S; Jain, Sanjay K; Tonge, Peter J | PloS one | 28151985 | 2017 |
| The Promise of Molecular Imaging in the Study and Treatment of Infectious Diseases. | Jain, Sanjay K | Molecular imaging and biology | 28155078 | 2017 06 |
| Successful cure of extensively drug-resistant pulmonary tuberculosis in a young child. | Salazar-Austin, Nicole; Akinboyo, Ibukunoluwa; Jain, Sanjay K | The Lancet. Infectious diseases | 28845790 | 2017 Sep |
| 21st Century Cell Culture for 21st Century Toxicology. | Pamies, David; Hartung, Thomas | Chemical research in toxicology | 28092941 | 2017 Jan 17 |
| Pharmacological Modulation of Noradrenergic Arousal Circuitry Disrupts Functional Connectivity of the Locus Ceruleus in Humans. | Song, Andrew H; Kucyi, Aaron; Napadow, Vitaly; Brown, Emery N; Loggia, Marco L; Akeju, Oluwaseun | The Journal of neuroscience : the official journal of the Society for Neuroscience | 28626012 | 2017 07 19 |
| Sevoflurane Induces Coherent Slow-Delta Oscillations in Rats. | Guidera, Jennifer A; Taylor, Norman E; Lee, Justin T; Vlasov, Ksenia Y; Pei, JunZhu; Stephen, Emily P; Mayo, J Patrick; Brown, Emery N; Solt, Ken | Frontiers in neural circuits | 28725184 | 2017 |
| Near-Infrared Fluorescent Proteins Engineered from Bacterial Phytochromes in Neuroimaging. | Piatkevich, Kiryl D; Suk, Ho-Jun; Kodandaramaiah, Suhasa B; Yoshida, Fumiaki; DeGennaro, Ellen M; Drobizhev, Mikhail; Hughes, Thomas E; Desimone, Robert; Boyden, Edward S; Verkhusha, Vladislav V | Biophysical journal | 29017728 | 2017 Nov 21 |
| Wide-field three-photon excitation in biological samples. | Rowlands, Christopher J; Park, Demian; Bruns, Oliver T; Piatkevich, Kiryl D; Fukumura, Dai; Jain, Rakesh K; Bawendi, Moungi G; Boyden, Edward S; So, Peter Tc | Light, science & applications | 29152380 | 2017 May 05 |
| Tumor-suppressor genes that escape from X-inactivation contribute to cancer sex bias. | Dunford, Andrew; Weinstock, David M; Savova, Virginia; Schumacher, Steven E; Cleary, John P; Yoda, Akinori; Sullivan, Timothy J; Hess, Julian M; Gimelbrant, Alexander A; Beroukhim, Rameen; Lawrence, Michael S; Getz, Gad; Lane, Andrew A | Nature genetics | 27869828 | 2017 01 |
| 31P-dephased, 13C-detected REDOR for NMR crystallography at natural isotopic abundance. | Greenwood, Alexander I; Clay, Mary C; Rienstra, Chad M | Journal of magnetic resonance (San Diego, Calif. : 1997) | 28319851 | 2017 May |
| Deconstruction of the Ras switching cycle through saturation mutagenesis. | Bandaru, Pradeep; Shah, Neel H; Bhattacharyya, Moitrayee; Barton, John P; Kondo, Yasushi; Cofsky, Joshua C; Gee, Christine L; Chakraborty, Arup K; Kortemme, Tanja; Ranganathan, Rama; Kuriyan, John | eLife | 28686159 | 2017 Jul 07 |
| Household triclosan and triclocarban effects on the infant and maternal microbiome. | Ribado, Jessica V; Ley, Catherine; Haggerty, Thomas D; Tkachenko, Ekaterina; Bhatt, Ami S; Parsonnet, Julie | EMBO molecular medicine | 29030459 | 2017 12 |
| Risk of Clostridium difficile Infection in Patients With Celiac Disease: A Population-Based Study. | Lebwohl, Benjamin; Nobel, Yael R; Green, Peter H R; Blaser, Martin J; Ludvigsson, Jonas F | The American journal of gastroenterology | 29087398 | 2017 Dec |
| cis-Regulatory Circuits Regulating NEK6 Kinase Overexpression in Transformed B Cells Are Super-Enhancer Independent. | Huang, Yue; Koues, Olivia I; Zhao, Jiang-Yang; Liu, Regina; Pyfrom, Sarah C; Payton, Jacqueline E; Oltz, Eugene M | Cell reports | 28329684 | 2017 03 21 |
| Interrogating open issues in cancer precision medicine with patient-derived xenografts. | Byrne, Annette T; Alférez, Denis G; Amant, Frédéric; Annibali, Daniela; Arribas, Joaquín; Biankin, Andrew V; Bruna, Alejandra; Budinská, Eva; Caldas, Carlos; Chang, David K; Clarke, Robert B; Clevers, Hans; Coukos, George; Dangles-Marie, Virginie; Eckhardt, S Gail; Gonzalez-Suarez, Eva; Hermans, Els; Hidalgo, Manuel; Jarzabek, Monika A; de Jong, Steven; Jonkers, Jos; Kemper, Kristel; Lanfrancone, Luisa; Mælandsmo, Gunhild Mari; Marangoni, Elisabetta; Marine, Jean-Christophe; Medico, Enzo; Norum, Jens Henrik; Palmer, Héctor G; Peeper, Daniel S; Pelicci, Pier Giuseppe; Piris-Gimenez, Alejandro; Roman-Roman, Sergio; Rueda, Oscar M; Seoane, Joan; Serra, Violeta; Soucek, Laura; Vanhecke, Dominique; Villanueva, Alberto; Vinolo, Emilie; Bertotti, Andrea; Trusolino, Livio | Nature reviews. Cancer | 28104906 | 2017 Apr |
| Models for Predicting Stage in Head and Neck Squamous Cell Carcinoma Using Proteomic and Transcriptomic Data. | Kaddi, Chanchala D; Wang, May D | IEEE journal of biomedical and health informatics | 26462248 | 2017 Jan |
| -Omic and Electronic Health Record Big Data Analytics for Precision Medicine. | Wu, Po-Yen; Cheng, Chih-Wen; Kaddi, Chanchala D; Venugopalan, Janani; Hoffman, Ryan; Wang, May D | IEEE transactions on bio-medical engineering | 27740470 | 2017 Feb |
| Structural and Molecular Mechanisms of Cytokine-Mediated Endocrine Resistance in Human Breast Cancer Cells. | Stender, Joshua D; Nwachukwu, Jerome C; Kastrati, Irida; Kim, Yohan; Strid, Tobias; Yakir, Maayan; Srinivasan, Sathish; Nowak, Jason; Izard, Tina; Rangarajan, Erumbi S; Carlson, Kathryn E; Katzenellenbogen, John A; Yao, Xin-Qiu; Grant, Barry J; Leong, Hon S; Lin, Chin-Yo; Frasor, Jonna; Nettles, Kendall W; Glass, Christopher K | Molecular cell | 28306507 | 2017 Mar 16 |
| Handheld optical-resolution photoacoustic microscopy. | Lin, Li; Zhang, Pengfei; Xu, Song; Shi, Junhui; Li, Lei; Yao, Junjie; Wang, Lidai; Zou, Jun; Wang, Lihong V | Journal of biomedical optics | 27775746 | 2017 04 01 |
| Label-free high-throughput detection and quantification of circulating melanoma tumor cell clusters by linear-array-based photoacoustic tomography. | Hai, Pengfei; Zhou, Yong; Zhang, Ruiying; Ma, Jun; Li, Yang; Shao, Jin-Yu; Wang, Lihong V | Journal of biomedical optics | 27832253 | 2017 Apr 01 |
| Single-shot real-time video recording of a photonic Mach cone induced by a scattered light pulse. | Liang, Jinyang; Ma, Cheng; Zhu, Liren; Chen, Yujia; Gao, Liang; Wang, Lihong V | Science advances | 28116357 | 2017 Jan |
| Noninvasive Determination of Melanoma Depth using a Handheld Photoacoustic Probe. | Zhou, Yong; Tripathi, Shivani V; Rosman, Ilana; Ma, Jun; Hai, Pengfei; Linette, Gerald P; Council, M Laurin; Fields, Ryan C; Wang, Lihong V; Cornelius, Lynn A | The Journal of investigative dermatology | 28163070 | 2017 Jun |
| Sub-Nyquist sampling boosts targeted light transport through opaque scattering media. | Shen, Yuecheng; Liu, Yan; Ma, Cheng; Wang, Lihong V | Optica | 28670607 | 2017 Jan 20 |
| High-speed single-shot optical focusing through dynamic scattering media with full-phase wavefront shaping. | Hemphill, Ashton S; Shen, Yuecheng; Liu, Yan; Wang, Lihong V | Applied physics letters | 29249832 | 2017 Nov 27 |
| Single-impulse Panoramic Photoacoustic Computed Tomography of Small-animal Whole-body Dynamics at High Spatiotemporal Resolution. | Li, Lei; Zhu, Liren; Ma, Cheng; Lin, Li; Yao, Junjie; Wang, Lidai; Maslov, Konstantin; Zhang, Ruiying; Chen, Wanyi; Shi, Junhui; Wang, Lihong V | Nature biomedical engineering | 29333331 | 2017 |
| Growth and stress response mechanisms underlying post-feeding regenerative organ growth in the Burmese python. | Andrew, Audra L; Perry, Blair W; Card, Daren C; Schield, Drew R; Ruggiero, Robert P; McGaugh, Suzanne E; Choudhary, Amit; Secor, Stephen M; Castoe, Todd A | BMC genomics | 28464824 | 2017 05 02 |
| Multiplexed Exchange-PAINT imaging reveals ligand-dependent EGFR and Met interactions in the plasma membrane. | Werbin, Jeffrey L; Avendaño, Maier S; Becker, Verena; Jungmann, Ralf; Yin, Peng; Danuser, Gaudenz; Sorger, Peter K | Scientific reports | 28939861 | 2017 Sep 22 |
| Programmable self-assembly of three-dimensional nanostructures from 10,000 unique components. | Ong, Luvena L; Hanikel, Nikita; Yaghi, Omar K; Grun, Casey; Strauss, Maximilian T; Bron, Patrick; Lai-Kee-Him, Josephine; Schueder, Florian; Wang, Bei; Wang, Pengfei; Kishi, Jocelyn Y; Myhrvold, Cameron; Zhu, Allen; Jungmann, Ralf; Bellot, Gaetan; Ke, Yonggang; Yin, Peng | Nature | 29219968 | 2017 Dec 06 |
| Single-stranded DNA and RNA origami. | Han, Dongran; Qi, Xiaodong; Myhrvold, Cameron; Wang, Bei; Dai, Mingjie; Jiang, Shuoxing; Bates, Maxwell; Liu, Yan; An, Byoungkwon; Zhang, Fei; Yan, Hao; Yin, Peng | Science (New York, N.Y.) | 29242318 | 2017 Dec 15 |
| Small molecule Photoregulin3 prevents retinal degeneration in the RhoP23H mouse model of retinitis pigmentosa. | Nakamura, Paul A; Shimchuk, Andy A; Tang, Shibing; Wang, Zhizhi; DeGolier, Kole; Ding, Sheng; Reh, Thomas A | eLife | 29148976 | 2017 Nov 17 |
| Post-termination Ribosome Intermediate Acts as the Gateway to Ribosome Recycling. | Prabhakar, Arjun; Capece, Mark C; Petrov, Alexey; Choi, Junhong; Puglisi, Joseph D | Cell reports | 28683310 | 2017 Jul 05 |
| Neural oscillations demonstrate that general anesthesia and sedative states are neurophysiologically distinct from sleep. | Akeju, Oluwaseun; Brown, Emery N | Current opinion in neurobiology | 28544930 | 2017 Jun |
| Design, implementation, and evaluation of a physiological closed-loop control device for medically-induced coma. | Jingzhi An; Purdon, Patrick L; Solt, Ken; Sims, Nathaniel M; Brown, Emery N; Westover, M Brandon | Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference | 29060851 | 2017 Jul |
| Pharmacodynamic modeling of propofol-induced general anesthesia in young adults. | Chakravarty, Sourish; Nikolaeva, Ksenia; Kishnan, Devika; Flores, Francisco J; Purdon, Patrick L; Brown, Emery N | ... Health innovations and point-of-care technologies conference. Health innovations and point-of-care technologies conference | 32803192 | 2017 Nov |
| Endothelial jagged-2 sustains hematopoietic stem and progenitor reconstitution after myelosuppression. | Guo, Peipei; Poulos, Michael G; Palikuqi, Brisa; Badwe, Chaitanya R; Lis, Raphael; Kunar, Balvir; Ding, Bi-Sen; Rabbany, Sina Y; Shido, Koji; Butler, Jason M; Rafii, Shahin | The Journal of clinical investigation | 29058691 | 2017 12 01 |
| Are Nomothetic or Ideographic Approaches Superior in Predicting Daily Exercise Behaviors? | Cheung, Ying Kuen; Hsueh, Pei-Yun Sabrina; Qian, Min; Yoon, Sunmoo; Meli, Laura; Diaz, Keith M; Schwartz, Joseph E; Kronish, Ian M; Davidson, Karina W | Methods of information in medicine | 29582914 | 2017 |
| Nucleotide-time alignment for molecular recorders. | Cybulski, Thaddeus R; Boyden, Edward S; Church, George M; Tyo, Keith E J; Kording, Konrad P | PLoS computational biology | 28459860 | 2017 May |
| Insights into the role of somatic mosaicism in the brain. | Paquola, Apuã C M; Erwin, Jennifer A; Gage, Fred H | Current opinion in systems biology | 29226270 | 2017 Feb |
| BLISS is a versatile and quantitative method for genome-wide profiling of DNA double-strand breaks. | Yan, Winston X; Mirzazadeh, Reza; Garnerone, Silvano; Scott, David; Schneider, Martin W; Kallas, Tomasz; Custodio, Joaquin; Wernersson, Erik; Li, Yinqing; Gao, Linyi; Federova, Yana; Zetsche, Bernd; Zhang, Feng; Bienko, Magda; Crosetto, Nicola | Nature communications | 28497783 | 2017 May 12 |
| Engineered Cpf1 variants with altered PAM specificities. | Gao, Linyi; Cox, David B T; Yan, Winston X; Manteiga, John C; Schneider, Martin W; Yamano, Takashi; Nishimasu, Hiroshi; Nureki, Osamu; Crosetto, Nicola; Zhang, Feng | Nature biotechnology | 28581492 | 2017 Aug |
| AAV-mediated direct in vivo CRISPR screen identifies functional suppressors in glioblastoma. | Chow, Ryan D; Guzman, Christopher D; Wang, Guangchuan; Schmidt, Florian; Youngblood, Mark W; Ye, Lupeng; Errami, Youssef; Dong, Matthew B; Martinez, Michael A; Zhang, Sensen; Renauer, Paul; Bilguvar, Kaya; Gunel, Murat; Sharp, Phillip A; Zhang, Feng; Platt, Randall J; Chen, Sidi | Nature neuroscience | 28805815 | 2017 Oct |
| GUIDES: sgRNA design for loss-of-function screens. | Meier, Joshua A; Zhang, Feng; Sanjana, Neville E | Nature methods | 28858339 | 2017 Aug 31 |
| Slowing Down Aging. | Meyer, Katharina; Yankner, Bruce A | Cell metabolism | 28978424 | 2017 Oct 03 |
| Hybrid Structured Illumination Expansion Microscopy Reveals Microbial Cytoskeleton Organization. | Halpern, Aaron R; Alas, Germain C M; Chozinski, Tyler J; Paredez, Alexander R; Vaughan, Joshua C | ACS nano | 29165993 | 2017 Dec 26 |
| Motor Cortical Visuomotor Feedback Activity Is Initially Isolated from Downstream Targets in Output-Null Neural State Space Dimensions. | Stavisky, Sergey D; Kao, Jonathan C; Ryu, Stephen I; Shenoy, Krishna V | Neuron | 28625485 | 2017 Jul 05 |
| Genetic and epigenetic heterogeneity and the impact on cancer relapse. | Hassan, Ciaran; Afshinnekoo, Ebrahim; Li, Sheng; Wu, Shixiu; Mason, Christopher E | Experimental hematology | 28705639 | 2017 10 |
| Single-Cell RNA-Seq Analysis of Infiltrating Neoplastic Cells at the Migrating Front of Human Glioblastoma. | Darmanis, Spyros; Sloan, Steven A; Croote, Derek; Mignardi, Marco; Chernikova, Sophia; Samghababi, Peyman; Zhang, Ye; Neff, Norma; Kowarsky, Mark; Caneda, Christine; Li, Gordon; Chang, Steven D; Connolly, Ian David; Li, Yingmei; Barres, Ben A; Gephart, Melanie Hayden; Quake, Stephen R | Cell reports | 29091775 | 2017 Oct 31 |
| Fully implantable, battery-free wireless optoelectronic devices for spinal optogenetics. | Samineni, Vijay K; Yoon, Jangyeol; Crawford, Kaitlyn E; Jeong, Yu Ra; McKenzie, Kajanna C; Shin, Gunchul; Xie, Zhaoqian; Sundaram, Saranya S; Li, Yuhang; Yang, Min Young; Kim, Jeonghyun; Wu, Di; Xue, Yeguang; Feng, Xue; Huang, Yonggang; Mickle, Aaron D; Banks, Anthony; Ha, Jeong Sook; Golden, Judith P; Rogers, John A; Gereau 4th, Robert W | Pain | 28700536 | 2017 Nov |
| Characterization of interfacial socket pressure in transhumeral prostheses: A case series. | Schofield, Jonathon S; Schoepp, Katherine R; Williams, Heather E; Carey, Jason P; Marasco, Paul D; Hebert, Jacqueline S | PloS one | 28575012 | 2017 |
| The neural response properties and cortical organization of a rapidly adapting muscle sensory group response that overlaps with the frequencies that elicit the kinesthetic illusion. | Marasco, Paul D; Bourbeau, Dennis J; Shell, Courtney E; Granja-Vazquez, Rafael; Ina, Jason G | PloS one | 29182648 | 2017 |
| Mutations underlying Episodic Ataxia type-1 antagonize Kv1.1 RNA editing. | Ferrick-Kiddie, Elizabeth A; Rosenthal, Joshua J C; Ayers, Gregory D; Emeson, Ronald B | Scientific reports | 28216637 | 2017 02 20 |
| Site-directed RNA repair of endogenous Mecp2 RNA in neurons. | Sinnamon, John R; Kim, Susan Y; Corson, Glen M; Song, Zhen; Nakai, Hiroyuki; Adelman, John P; Mandel, Gail | Proceedings of the National Academy of Sciences of the United States of America | 29078406 | 2017 Oct 31 |
| Iterative expansion microscopy. | Chang, Jae-Byum; Chen, Fei; Yoon, Young-Gyu; Jung, Erica E; Babcock, Hazen; Kang, Jeong Seuk; Asano, Shoh; Suk, Ho-Jun; Pak, Nikita; Tillberg, Paul W; Wassie, Asmamaw T; Cai, Dawen; Boyden, Edward S | Nature methods | 28417997 | 2017 Jun |
| Trial-by-Trial Motor Cortical Correlates of a Rapidly Adapting Visuomotor Internal Model. | Stavisky, Sergey D; Kao, Jonathan C; Ryu, Stephen I; Shenoy, Krishna V | The Journal of neuroscience : the official journal of the Society for Neuroscience | 28087767 | 2017 Feb 15 |
| Leveraging neural dynamics to extend functional lifetime of brain-machine interfaces. | Kao, Jonathan C; Ryu, Stephen I; Shenoy, Krishna V | Scientific reports | 28784984 | 2017 Aug 07 |
| Neural Circuit Inference from Function to Structure. | Real, Esteban; Asari, Hiroki; Gollisch, Tim; Meister, Markus | Current biology : CB | 28065610 | 2017 Jan 23 |
| Electron Microscopic Reconstruction of Functionally Identified Cells in a Neural Integrator. | Vishwanathan, Ashwin; Daie, Kayvon; Ramirez, Alexandro D; Lichtman, Jeff W; Aksay, Emre R F; Seung, H Sebastian | Current biology : CB | 28712570 | 2017 Jul 24 |
| Digital tissue and what it may reveal about the brain. | Morgan, Josh L; Lichtman, Jeff W | BMC biology | 29084528 | 2017 10 30 |
| Immune Escape via a Transient Gene Expression Program Enables Productive Replication of a Latent Pathogen. | Linderman, Jessica A; Kobayashi, Mariko; Rayannavar, Vinayak; Fak, John J; Darnell, Robert B; Chao, Moses V; Wilson, Angus C; Mohr, Ian | Cell reports | 28147283 | 2017 Jan 31 |
| Structural and functional dissection of the DH and PH domains of oncogenic Bcr-Abl tyrosine kinase. | Reckel, Sina; Gehin, Charlotte; Tardivon, Delphine; Georgeon, Sandrine; Kükenshöner, Tim; Löhr, Frank; Koide, Akiko; Buchner, Lena; Panjkovich, Alejandro; Reynaud, Aline; Pinho, Sara; Gerig, Barbara; Svergun, Dmitri; Pojer, Florence; Güntert, Peter; Dötsch, Volker; Koide, Shohei; Gavin, Anne-Claude; Hantschel, Oliver | Nature communications | 29235475 | 2017 Dec 13 |
| Combinatorial bZIP dimers display complex DNA-binding specificity landscapes. | Rodríguez-Martínez, José A; Reinke, Aaron W; Bhimsaria, Devesh; Keating, Amy E; Ansari, Aseem Z | eLife | 28186491 | 2017 Feb 10 |
| Advancing Women's Health and Women's Leadership With Endowed Chairs in Women's Health. | Carnes, Molly; Johnson, Paula; Klein, Wendy; Jenkins, Marjorie; Bairey Merz, C Noel | Academic medicine : journal of the Association of American Medical Colleges | 27759706 | 2017 Feb |
| Thalamocortical control of propofol phase-amplitude coupling. | Soplata, Austin E; McCarthy, Michelle M; Sherfey, Jason; Lee, Shane; Purdon, Patrick L; Brown, Emery N; Kopell, Nancy | PLoS computational biology | 29227992 | 2017 12 |
| Tuning the Cavity Size and Chirality of Self-Assembling 3D DNA Crystals. | Simmons, Chad R; Zhang, Fei; MacCulloch, Tara; Fahmi, Noureddine; Stephanopoulos, Nicholas; Liu, Yan; Seeman, Nadrian C; Yan, Hao | Journal of the American Chemical Society | 28731332 | 2017 Aug 16 |
| Inhibition Mechanism of an Anti-CRISPR Suppressor AcrIIA4 Targeting SpyCas9. | Yang, Hui; Patel, Dinshaw J | Molecular cell | 28602637 | 2017 Jul 06 |
| Risk alleles of genes with monoallelic expression are enriched in gain-of-function variants and depleted in loss-of-function variants for neurodevelopmental disorders. | Savova, V; Vinogradova, S; Pruss, D; Gimelbrant, A A; Weiss, L A | Molecular psychiatry | 28265118 | 2017 Dec |
| Triclosan and triclocarban exposure and thyroid function during pregnancy-A randomized intervention. | Ley, Catherine; Pischel, Lauren; Parsonnet, Julie | Reproductive toxicology (Elmsford, N.Y.) | 28939492 | 2017 Dec |
| In Situ Super-Resolution Imaging of Genomic DNA with OligoSTORM and OligoDNA-PAINT. | Beliveau, Brian J; Boettiger, Alistair N; Nir, Guy; Bintu, Bogdan; Yin, Peng; Zhuang, Xiaowei; Wu, C-Ting | Methods in molecular biology (Clifton, N.J.) | 28924672 | 2017 |
| Total-body imaging: Transforming the role of positron emission tomography. | Cherry, Simon R; Badawi, Ramsey D; Karp, Joel S; Moses, William W; Price, Pat; Jones, Terry | Science translational medicine | 28298419 | 2017 Mar 15 |
| Lateral gene transfer between prokaryotes and eukaryotes. | Sieber, Karsten B; Bromley, Robin E; Dunning Hotopp, Julie C | Experimental cell research | 28189637 | 2017 Sep 15 |
| Randomised, double-blind, placebo-controlled trial with azithromycin selects for anti-inflammatory microbial metabolites in the emphysematous lung. | Segal, Leopoldo N; Clemente, Jose C; Wu, Benjamin G; Wikoff, William R; Gao, Zhan; Li, Yonghua; Ko, Jane P; Rom, William N; Blaser, Martin J; Weiden, Michael D | Thorax | 27486204 | 2017 01 |
| A powerful microbiome-based association test and a microbial taxa discovery framework for comprehensive association mapping. | Koh, Hyunwook; Blaser, Martin J; Li, Huilin | Microbiome | 28438217 | 2017 04 24 |
| The theory of disappearing microbiota and the epidemics of chronic diseases. | Blaser, Martin J | Nature reviews. Immunology | 28749457 | 2017 Jul 27 |
| Reconfigurable Three-Dimensional Gold Nanorod Plasmonic Nanostructures Organized on DNA Origami Tripod. | Zhan, Pengfei; Dutta, Palash K; Wang, Pengfei; Song, Gang; Dai, Mingjie; Zhao, Shu-Xia; Wang, Zhen-Gang; Yin, Peng; Zhang, Wei; Ding, Baoquan; Ke, Yonggang | ACS nano | 28056172 | 2017 Feb 28 |
| Imaging RNA polymerase III transcription using a photostable RNA-fluorophore complex. | Song, Wenjiao; Filonov, Grigory S; Kim, Hyaeyeong; Hirsch, Markus; Li, Xing; Moon, Jared D; Jaffrey, Samie R | Nature chemical biology | 28945233 | 2017 Nov |
| A DNA nanoscope via auto-cycling proximity recording. | Schaus, Thomas E; Woo, Sungwook; Xuan, Feng; Chen, Xi; Yin, Peng | Nature communications | 28947733 | 2017 Sep 25 |
| Deltex2 represses MyoD expression and inhibits myogenic differentiation by acting as a negative regulator of Jmjd1c. | Luo, Dan; de Morree, Antoine; Boutet, Stephane; Quach, Navaline; Natu, Vanita; Rustagi, Arjun; Rando, Thomas A | Proceedings of the National Academy of Sciences of the United States of America | 28351977 | 2017 04 11 |
| Bayesian Nonparametric Ordination for the Analysis of Microbial Communities. | Ren, Boyu; Bacallado, Sergio; Favaro, Stefano; Holmes, Susan; Trippa, Lorenzo | Journal of the American Statistical Association | 29430070 | 2017 |
| Genetic Variants in Epigenetic Pathways and Risks of Multiple Cancers in the GAME-ON Consortium. | Toth, Reka; Scherer, Dominique; Kelemen, Linda E; Risch, Angela; Hazra, Aditi; Balavarca, Yesilda; Issa, Jean-Pierre J; Moreno, Victor; Eeles, Rosalind A; Ogino, Shuji; Wu, Xifeng; Ye, Yuanqing; Hung, Rayjean J; Goode, Ellen L; Ulrich, Cornelia M; OCAC, CORECT, TRICL, ELLIPSE, DRIVE, and GAME-ON consortia | Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology | 28115406 | 2017 06 |
| Each Medium Tells a Different Story: The Effect of Message Channel on Narrative Persuasion. | Walter, Nathan; Murphy, Sheila T; Frank, Lauren B; Baezconde-Garbanati, Lourdes | Communication research reports : CRR | 30739986 | 2017 |
| High-speed photoacoustic microscopy of mouse cortical microhemodynamics. | Lin, Li; Yao, Junjie; Zhang, Ruiying; Chen, Chun-Cheng; Huang, Chih-Hsien; Li, Yang; Wang, Lidai; Chapman, William; Zou, Jun; Wang, Lihong V | Journal of biophotonics | 28009098 | 2017 Jun |
| Fast label-free multilayered histology-like imaging of human breast cancer by photoacoustic microscopy. | Wong, Terence T W; Zhang, Ruiying; Hai, Pengfei; Zhang, Chi; Pleitez, Miguel A; Aft, Rebecca L; Novack, Deborah V; Wang, Lihong V | Science advances | 28560329 | 2017 May |
| Motionless volumetric photoacoustic microscopy with spatially invariant resolution. | Yang, Jiamiao; Gong, Lei; Xu, Xiao; Hai, Pengfei; Shen, Yuecheng; Suzuki, Yuta; Wang, Lihong V | Nature communications | 28974681 | 2017 Oct 03 |
| Focusing light through scattering media by polarization modulation based generalized digital optical phase conjugation. | Yang, Jiamiao; Shen, Yuecheng; Liu, Yan; Hemphill, Ashton S; Wang, Lihong V | Applied physics letters | 29203931 | 2017 Nov 13 |
| Live-cell mapping of organelle-associated RNAs via proximity biotinylation combined with protein-RNA crosslinking. | Kaewsapsak, Pornchai; Shechner, David Michael; Mallard, William; Rinn, John L; Ting, Alice Y | eLife | 29239719 | 2017 12 14 |
| In situ expansion of engineered human liver tissue in a mouse model of chronic liver disease. | Stevens, Kelly R; Scull, Margaret A; Ramanan, Vyas; Fortin, Chelsea L; Chaturvedi, Ritika R; Knouse, Kristin A; Xiao, Jing W; Fung, Canny; Mirabella, Teodelinda; Chen, Amanda X; McCue, Margaret G; Yang, Michael T; Fleming, Heather E; Chung, Kwanghun; de Jong, Ype P; Chen, Christopher S; Rice, Charles M; Bhatia, Sangeeta N | Science translational medicine | 28724577 | 2017 07 19 |
| Insulin action and resistance in obesity and type 2 diabetes. | Czech, Michael P | Nature medicine | 28697184 | 2017 Jul 11 |
| Structural Basis for the Canonical and Non-canonical PAM Recognition by CRISPR-Cpf1. | Yamano, Takashi; Zetsche, Bernd; Ishitani, Ryuichiro; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu | Molecular cell | 28781234 | 2017 Aug 17 |
| Re: Increased 18F-2-Fluorodeoxysorbitol (18F-FDS) Activity in a Pituitary Spindle Cell Carcinoma. | Javadi, Mehrbod S; Ordonez, Alvaro A; Jain, Sanjay K | Clinical nuclear medicine | 28319504 | 2017 Aug |
| Balancing the Risks of Radiation and Anesthesia in Pediatric Patients. | Tucker, Elizabeth W; Jain, Sanjay K; Mahesh, Mahadevappa | Journal of the American College of Radiology : JACR | 28750847 | 2017 Nov |
| A multi-trap microfluidic chip enabling longitudinal studies of nerve regeneration in Caenorhabditis elegans. | Gokce, Sertan Kutal; Hegarty, Evan Marley; Mondal, Sudip; Zhao, Peisen; Ghorashian, Navid; Hilliard, Massimo A; Ben-Yakar, Adela | Scientific reports | 28852096 | 2017 Aug 29 |
| Variant surface glycoprotein density defines an immune evasion threshold for African trypanosomes undergoing antigenic variation. | Pinger, Jason; Chowdhury, Shanin; Papavasiliou, F Nina | Nature communications | 29018220 | 2017 Oct 10 |
| Increasing body mass index predicts increasing difficulty, failure rate, and time to discovery of failure of epidural anesthesia in laboring patients. | Kula, Ayse O; Riess, Matthias L; Ellinas, Elizabeth H | Journal of clinical anesthesia | 28235511 | 2017 Feb |
| Lipid emulsion enhances cardiac performance after ischemia-reperfusion in isolated hearts from summer-active arctic ground squirrels. | Salzman, Michele M; Cheng, Qunli; Deklotz, Richard J; Dulai, Gurpreet K; Douglas, Hunter F; Dikalova, Anna E; Weihrauch, Dorothee; Barnes, Brian M; Riess, Matthias L | Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology | 28364393 | 2017 Jul |
| Early Effects of Prolonged Cardiac Arrest and Ischemic Postconditioning during Cardiopulmonary Resuscitation on Cardiac and Brain Mitochondrial Function in Pigs. | Matsuura, Timothy R; Bartos, Jason A; Tsangaris, Adamantios; Shekar, Kadambari Chandra; Olson, Matthew D; Riess, Matthias L; Bienengraeber, Martin; Aufderheide, Tom P; Neumar, Robert W; Rees, Jennifer N; McKnite, Scott H; Dikalova, Anna E; Dikalov, Sergey I; Douglas, Hunter F; Yannopoulos, Demetris | Resuscitation | 28408349 | 2017 Jul |
| Sox17 drives functional engraftment of endothelium converted from non-vascular cells. | Schachterle, William; Badwe, Chaitanya R; Palikuqi, Brisa; Kunar, Balvir; Ginsberg, Michael; Lis, Raphael; Yokoyama, Masataka; Elemento, Olivier; Scandura, Joseph M; Rafii, Shahin | Nature communications | 28091527 | 2017 Jan 16 |
| Platelets prime hematopoietic and vascular niche to drive angiocrine-mediated liver regeneration. | Shido, Koji; Chavez, Deebly; Cao, Zhongwei; Ko, Jane; Rafii, Shahin; Ding, Bi-Sen | Signal transduction and targeted therapy | 29201496 | 2017 |
| Ultrafast Synthesis of Multifunctional Submicrometer Hollow Silica Spheres in Microfluidic Spiral Channels. | Nie, Yuan; Hao, Nanjing; Zhang, John X J | Scientific reports | 28974729 | 2017 Oct 03 |
| Patterned Plasmonic Surfaces-Theory, Fabrication, and Applications in Biosensing. | Chorsi, Hamid T; Zhu, Ying; Zhang, John X J | Journal of microelectromechanical systems : a joint IEEE and ASME publication on microstructures, microactuators, microsensors, and microsystems | 29276365 | 2017 Aug |
| Microfluidics-mediated self-template synthesis of anisotropic hollow ellipsoidal mesoporous silica nanomaterials. | Hao, Nanjing; Nie, Yuan; Tadimety, Amogha; Closson, Andrew B; Zhang, John X J | Materials research letters | 30854261 | 2017 |
| DNA binding strength increases the processivity and activity of a Y-Family DNA polymerase. | Wu, Jing; de Paz, Alexandra; Zamft, Bradley M; Marblestone, Adam H; Boyden, Edward S; Kording, Konrad P; Tyo, Keith E J | Scientific reports | 28684739 | 2017 Jul 06 |
| A cryptography-based approach for movement decoding. | Dyer, Eva L; Gheshlaghi Azar, Mohammad; Perich, Matthew G; Fernandes, Hugo L; Naufel, Stephanie; Miller, Lee E; Körding, Konrad P | Nature biomedical engineering | 31015712 | 2017 12 |
| Examining non-LTR retrotransposons in the context of the evolving primate brain. | Linker, Sara B; Marchetto, Maria C; Narvaiza, Iñigo; Denli, Ahmet M; Gage, Fred H | BMC biology | 28800766 | 2017 Aug 11 |
| Ancestral Circuits for the Coordinated Modulation of Brain State. | Lovett-Barron, Matthew; Andalman, Aaron S; Allen, William E; Vesuna, Sam; Kauvar, Isaac; Burns, Vanessa M; Deisseroth, Karl | Cell | 29103613 | 2017 Nov 30 |
| Genome-scale CRISPR-Cas9 knockout and transcriptional activation screening. | Joung, Julia; Konermann, Silvana; Gootenberg, Jonathan S; Abudayyeh, Omar O; Platt, Randall J; Brigham, Mark D; Sanjana, Neville E; Zhang, Feng | Nature protocols | 28333914 | 2017 Apr |
| Nucleic acid detection with CRISPR-Cas13a/C2c2. | Gootenberg, Jonathan S; Abudayyeh, Omar O; Lee, Jeong Wook; Essletzbichler, Patrick; Dy, Aaron J; Joung, Julia; Verdine, Vanessa; Donghia, Nina; Daringer, Nichole M; Freije, Catherine A; Myhrvold, Cameron; Bhattacharyya, Roby P; Livny, Jonathan; Regev, Aviv; Koonin, Eugene V; Hung, Deborah T; Sabeti, Pardis C; Collins, James J; Zhang, Feng | Science (New York, N.Y.) | 28408723 | 2017 04 28 |
| Structural Basis for the Altered PAM Recognition by Engineered CRISPR-Cpf1. | Nishimasu, Hiroshi; Yamano, Takashi; Gao, Linyi; Zhang, Feng; Ishitani, Ryuichiro; Nureki, Osamu | Molecular cell | 28595896 | 2017 Jul 06 |
| Massively parallel single-nucleus RNA-seq with DroNc-seq. | Habib, Naomi; Avraham-Davidi, Inbal; Basu, Anindita; Burks, Tyler; Shekhar, Karthik; Hofree, Matan; Choudhury, Sourav R; Aguet, François; Gelfand, Ellen; Ardlie, Kristin; Weitz, David A; Rozenblatt-Rosen, Orit; Zhang, Feng; Regev, Aviv | Nature methods | 28846088 | 2017 Oct |
| RNA targeting with CRISPR-Cas13. | Abudayyeh, Omar O; Gootenberg, Jonathan S; Essletzbichler, Patrick; Han, Shuo; Joung, Julia; Belanto, Joseph J; Verdine, Vanessa; Cox, David B T; Kellner, Max J; Regev, Aviv; Lander, Eric S; Voytas, Daniel F; Ting, Alice Y; Zhang, Feng | Nature | 28976959 | 2017 10 12 |
| Dexmedetomidine Disrupts the Local and Global Efficiencies of Large-scale Brain Networks. | Hashmi, Javeria A; Loggia, Marco L; Khan, Sheraz; Gao, Lei; Kim, Jieun; Napadow, Vitaly; Brown, Emery N; Akeju, Oluwaseun | Anesthesiology | 28092321 | 2017 Mar |
| Thalamocortical synchronization during induction and emergence from propofol-induced unconsciousness. | Flores, Francisco J; Hartnack, Katharine E; Fath, Amanda B; Kim, Seong-Eun; Wilson, Matthew A; Brown, Emery N; Purdon, Patrick L | Proceedings of the National Academy of Sciences of the United States of America | 28743752 | 2017 Aug 08 |
| High-Affinity Nucleic-Acid-Based Receptors for Steroids. | Yang, Kyung-Ae; Chun, Hyosun; Zhang, Yameng; Pecic, Stevan; Nakatsuka, Nako; Andrews, Anne M; Worgall, Tilla S; Stojanovic, Milan N | ACS chemical biology | 29083858 | 2017 Dec 15 |
| Integrative classification of human coding and noncoding genes through RNA metabolism profiles. | Mukherjee, Neelanjan; Calviello, Lorenzo; Hirsekorn, Antje; de Pretis, Stefano; Pelizzola, Mattia; Ohler, Uwe | Nature structural & molecular biology | 27870833 | 2017 Jan |
| Small molecule modulator of sigma 2 receptor is neuroprotective and reduces cognitive deficits and neuroinflammation in experimental models of Alzheimer's disease. | Yi, Bitna; Sahn, James J; Ardestani, Pooneh Memar; Evans, Andrew K; Scott, Luisa L; Chan, Jessica Z; Iyer, Sangeetha; Crisp, Ashley; Zuniga, Gabriella; Pierce, Jonathan T; Martin, Stephen F; Shamloo, Mehrdad | Journal of neurochemistry | 27926996 | 2017 Feb |
| The TREM2-APOE Pathway Drives the Transcriptional Phenotype of Dysfunctional Microglia in Neurodegenerative Diseases. | Krasemann, Susanne; Madore, Charlotte; Cialic, Ron; Baufeld, Caroline; Calcagno, Narghes; El Fatimy, Rachid; Beckers, Lien; O'Loughlin, Elaine; Xu, Yang; Fanek, Zain; Greco, David J; Smith, Scott T; Tweet, George; Humulock, Zachary; Zrzavy, Tobias; Conde-Sanroman, Patricia; Gacias, Mar; Weng, Zhiping; Chen, Hao; Tjon, Emily; Mazaheri, Fargol; Hartmann, Kristin; Madi, Asaf; Ulrich, Jason D; Glatzel, Markus; Worthmann, Anna; Heeren, Joerg; Budnik, Bogdan; Lemere, Cynthia; Ikezu, Tsuneya; Heppner, Frank L; Litvak, Vladimir; Holtzman, David M; Lassmann, Hans; Weiner, Howard L; Ochando, Jordi; Haass, Christian; Butovsky, Oleg | Immunity | 28930663 | 2017 09 19 |
| Alloimmune Responses of Humanized Mice to Human Pluripotent Stem Cell Therapeutics. | Kooreman, Nigel G; de Almeida, Patricia E; Stack, Jonathan P; Nelakanti, Raman V; Diecke, Sebastian; Shao, Ning-Yi; Swijnenburg, Rutger-Jan; Sanchez-Freire, Veronica; Matsa, Elena; Liu, Chun; Connolly, Andrew J; Hamming, Jaap F; Quax, Paul H A; Brehm, Michael A; Greiner, Dale L; Shultz, Leonard D; Wu, Joseph C | Cell reports | 28834758 | 2017 Aug 22 |
| IL-1R Type 1-Deficient Mice Demonstrate an Impaired Host Immune Response against Cutaneous Vaccinia Virus Infection. | Tian, Tian; Jin, Michelle Qiushuang; Dubin, Krista; King, Sandra L; Hoetzenecker, Wolfram; Murphy, George F; Chen, Chen Amy; Kupper, Thomas S; Fuhlbrigge, Robert C | Journal of immunology (Baltimore, Md. : 1950) | 28468973 | 2017 06 01 |
| Arginine Metabolism in Myeloid Cells Shapes Innate and Adaptive Immunity. | Rodriguez, Paulo C; Ochoa, Augusto C; Al-Khami, Amir A | Frontiers in immunology | 28223985 | 2017 |
| Energy metabolic pathways control the fate and function of myeloid immune cells. | Al-Khami, Amir A; Rodriguez, Paulo C; Ochoa, Augusto C | Journal of leukocyte biology | 28515225 | 2017 08 |
| Retinoic Acid Inducible Gene 1 Protein (RIG1)-Like Receptor Pathway Is Required for Efficient Nuclear Reprogramming. | Sayed, Nazish; Ospino, Frank; Himmati, Farhan; Lee, Jieun; Chanda, Palas; Mocarski, Edward S; Cooke, John P | Stem cells (Dayton, Ohio) | 28276156 | 2017 05 |
| Inhibition of DAI-dependent necroptosis by the Z-DNA binding domain of the vaccinia virus innate immune evasion protein, E3. | Koehler, Heather; Cotsmire, Samantha; Langland, Jeffrey; Kibler, Karen V; Kalman, Daniel; Upton, Jason W; Mocarski, Edward S; Jacobs, Bertram L | Proceedings of the National Academy of Sciences of the United States of America | 29073079 | 2017 Oct 24 |
| Fleeting factors, turning back time. | Rando, Thomas A | Nature biotechnology | 28267729 | 2017 Mar 07 |
| Aging of the skeletal muscle extracellular matrix drives a stem cell fibrogenic conversion. | Stearns-Reider, Kristen M; D'Amore, Antonio; Beezhold, Kevin; Rothrauff, Benjamin; Cavalli, Loredana; Wagner, William R; Vorp, David A; Tsamis, Alkiviadis; Shinde, Sunita; Zhang, Changqing; Barchowsky, Aaron; Rando, Thomas A; Tuan, Rocky S; Ambrosio, Fabrisia | Aging cell | 28371268 | 2017 06 |
| Bioengineered constructs combined with exercise enhance stem cell-mediated treatment of volumetric muscle loss. | Quarta, Marco; Cromie, Melinda; Chacon, Robert; Blonigan, Justin; Garcia, Victor; Akimenko, Igor; Hamer, Mark; Paine, Patrick; Stok, Merel; Shrager, Joseph B; Rando, Thomas A | Nature communications | 28631758 | 2017 06 20 |
| Transcriptional Profiling of Quiescent Muscle Stem Cells In Vivo. | van Velthoven, Cindy T J; de Morree, Antoine; Egner, Ingrid M; Brett, Jamie O; Rando, Thomas A | Cell reports | 29141228 | 2017 Nov 14 |
| SREBP1 Contributes to Resolution of Pro-inflammatory TLR4 Signaling by Reprogramming Fatty Acid Metabolism. | Oishi, Yumiko; Spann, Nathanael J; Link, Verena M; Muse, Evan D; Strid, Tobias; Edillor, Chantle; Kolar, Matthew J; Matsuzaka, Takashi; Hayakawa, Sumio; Tao, Jenhan; Kaikkonen, Minna U; Carlin, Aaron F; Lam, Michael T; Manabe, Ichiro; Shimano, Hitoshi; Saghatelian, Alan; Glass, Christopher K | Cell metabolism | 28041958 | 2017 Feb 07 |
| Use of a single xenon flash lamp for photoacoustic computed tomography of multiple-centimeter-thick biological tissue ex vivo and a whole mouse body in vivo. | Wong, Terence T W; Zhou, Yong; Garcia-Uribe, Alejandro; Li, Lei; Maslov, Konstantin; Lin, Li; Wang, Lihong V | Journal of biomedical optics | 27775747 | 2017 Apr 01 |
| Aligner optimization increases accuracy and decreases compute times in multi-species sequence data. | Robinson, Kelly M; Hawkins, Aziah S; Santana-Cruz, Ivette; Adkins, Ricky S; Shetty, Amol C; Nagaraj, Sushma; Sadzewicz, Lisa; Tallon, Luke J; Rasko, David A; Fraser, Claire M; Mahurkar, Anup; Silva, Joana C; Dunning Hotopp, Julie C | Microbial genomics | 29114401 | 2017 09 |
| Release of Cell-free MicroRNA Tumor Biomarkers into the Blood Circulation with Pulsed Focused Ultrasound: A Noninvasive, Anatomically Localized, Molecular Liquid Biopsy. | Chevillet, John R; Khokhlova, Tatiana D; Giraldez, Maria D; Schade, George R; Starr, Frank; Wang, Yak-Nam; Gallichotte, Emily N; Wang, Kai; Hwang, Joo Ha; Tewari, Muneesh | Radiology | 27802108 | 2017 Apr |
| A biomimetic gelatin-based platform elicits a pro-differentiation effect on podocytes through mechanotransduction. | Hu, Mufeng; Azeloglu, Evren U; Ron, Amit; Tran-Ba, Khanh-Hoa; Calizo, Rhodora C; Tavassoly, Iman; Bhattacharya, Smiti; Jayaraman, Gomathi; Chen, Yibang; Rabinovich, Vera; Iyengar, Ravi; Hone, James C; He, John C; Kaufman, Laura J | Scientific reports | 28262745 | 2017 Mar 06 |
| Cell shape information is transduced through tension-independent mechanisms. | Ron, Amit; Azeloglu, Evren U; Calizo, Rhodora C; Hu, Mufeng; Bhattacharya, Smiti; Chen, Yibang; Jayaraman, Gomathi; Lee, Sunwoo; Neves-Zaph, Susana R; Li, Hong; Gordon, Ronald E; He, John C; Hone, James C; Iyengar, Ravi | Nature communications | 29247198 | 2017 Dec 15 |
| Robust Estimation of Sparse Narrowband Spectra from Neuronal Spiking Data. | Miran, Sina; Purdon, Patrick L; Brown, Emery N; Babadi, Behtash | IEEE transactions on bio-medical engineering | 28026746 | 2017 Oct |
| Rapidly evolving homing CRISPR barcodes. | Kalhor, Reza; Mali, Prashant; Church, George M | Nature methods | 27918539 | 2017 Feb |
| Closed-Loop Real-Time Imaging Enables Fully Automated Cell-Targeted Patch-Clamp Neural Recording In Vivo. | Suk, Ho-Jun; van Welie, Ingrid; Kodandaramaiah, Suhasa B; Allen, Brian; Forest, Craig R; Boyden, Edward S | Neuron | 28858614 | 2017 Aug 30 |
| Myt1l safeguards neuronal identity by actively repressing many non-neuronal fates. | Mall, Moritz; Kareta, Michael S; Chanda, Soham; Ahlenius, Henrik; Perotti, Nicholas; Zhou, Bo; Grieder, Sarah D; Ge, Xuecai; Drake, Sienna; Euong Ang, Cheen; Walker, Brandon M; Vierbuchen, Thomas; Fuentes, Daniel R; Brennecke, Philip; Nitta, Kazuhiro R; Jolma, Arttu; Steinmetz, Lars M; Taipale, Jussi; Südhof, Thomas C; Wernig, Marius | Nature | 28379941 | 2017 04 13 |
| On-demand dissolution of modular, synthetic extracellular matrix reveals local epithelial-stromal communication networks. | Valdez, Jorge; Cook, Christi D; Ahrens, Caroline Chopko; Wang, Alex J; Brown, Alexander; Kumar, Manu; Stockdale, Linda; Rothenberg, Daniel; Renggli, Kasper; Gordon, Elizabeth; Lauffenburger, Douglas; White, Forest; Griffith, Linda | Biomaterials | 28371736 | 2017 Jun |
| Rapid Selection of RNA Aptamers that Activate Fluorescence of Small Molecules. | Filonov, Grigory S | Methods in molecular biology (Clifton, N.J.) | 28255887 | 2017 |
| Composite Hydrogels with Engineered Microdomains for Optical Glucose Sensing at Low Oxygen Conditions. | Bornhoeft, Lindsey R; Biswas, Aniket; McShane, Michael J | Biosensors | 28117762 | 2017 Jan 22 |
| Universal Super-Resolution Multiplexing by DNA Exchange. | Schueder, Florian; Strauss, Maximilian T; Hoerl, David; Schnitzbauer, Joerg; Schlichthaerle, Thomas; Strauss, Sebastian; Yin, Peng; Harz, Hartmann; Leonhardt, Heinrich; Jungmann, Ralf | Angewandte Chemie (International ed. in English) | 28256790 | 2017 03 27 |
| Information-dependent enrichment analysis reveals time-dependent transcriptional regulation of the estrogen pathway of toxicity. | Pendse, Salil N; Maertens, Alexandra; Rosenberg, Michael; Roy, Dipanwita; Fasani, Rick A; Vantangoli, Marguerite M; Madnick, Samantha J; Boekelheide, Kim; Fornace, Albert J; Odwin, Shelly-Ann; Yager, James D; Hartung, Thomas; Andersen, Melvin E; McMullen, Patrick D | Archives of toxicology | 27592001 | 2017 Apr |
| Sodium nitroprusside enhanced cardiopulmonary resuscitation improves short term survival in a porcine model of ischemic refractory ventricular fibrillation. | Yannopoulos, Demetris; Bartos, Jason A; George, Stephen A; Sideris, George; Voicu, Sebastian; Oestreich, Brett; Matsuura, Timothy; Shekar, Kadambari; Rees, Jennifer; Aufderheide, Tom P | Resuscitation | 27771299 | 2017 Jan |
| Molecular Checkpoint Decisions Made by Subverted Vascular Niche Transform Indolent Tumor Cells into Chemoresistant Cancer Stem Cells. | Cao, Zhongwei; Scandura, Joseph M; Inghirami, Giorgio G; Shido, Koji; Ding, Bi-Sen; Rafii, Shahin | Cancer cell | 27989801 | 2017 Jan 09 |
| Patients and primary care providers identify opportunities for personalized (N-of-1) trials in the mobile health era. | Kronish, Ian M; Alcántara, Carmela; Duer-Hefele, Joan; St Onge, Tara; Davidson, Karina W; Carter, Eileen J; Medina, Vivian; Cohn, Elizabeth; Moise, Nathalie | Journal of clinical epidemiology | 28648833 | 2017 Sep |
| Integration of optogenetics with complementary methodologies in systems neuroscience. | Kim, Christina K; Adhikari, Avishek; Deisseroth, Karl | Nature reviews. Neuroscience | 28303019 | 2017 03 17 |
| BLIMP1 Induces Transient Metastatic Heterogeneity in Pancreatic Cancer. | Chiou, Shin-Heng; Risca, Viviana I; Wang, Gordon X; Yang, Dian; Grüner, Barbara M; Kathiria, Arwa S; Ma, Rosanna K; Vaka, Dedeepya; Chu, Pauline; Kozak, Margaret; Castellini, Laura; Graves, Edward E; Kim, Grace E; Mourrain, Philippe; Koong, Albert C; Giaccia, Amato J; Winslow, Monte M | Cancer discovery | 28790031 | 2017 Oct |
| ERMrest: A Collaborative Data Catalog with Fine Grain Access Control. | Czajkowski, Karl; Kesselman, Carl; Schuler, Robert | Proceedings ... IEEE International Conference on eScience. IEEE International Conference on eScience | 29756002 | 2017 Oct |
| Cas13b Is a Type VI-B CRISPR-Associated RNA-Guided RNase Differentially Regulated by Accessory Proteins Csx27 and Csx28. | Smargon, Aaron A; Cox, David B T; Pyzocha, Neena K; Zheng, Kaijie; Slaymaker, Ian M; Gootenberg, Jonathan S; Abudayyeh, Omar A; Essletzbichler, Patrick; Shmakov, Sergey; Makarova, Kira S; Koonin, Eugene V; Zhang, Feng | Molecular cell | 28065598 | 2017 Feb 16 |
| Chd8 Mutation Leads to Autistic-like Behaviors and Impaired Striatal Circuits. | Platt, Randall J; Zhou, Yang; Slaymaker, Ian M; Shetty, Ashwin S; Weisbach, Niels R; Kim, Jin-Ah; Sharma, Jitendra; Desai, Mitul; Sood, Sabina; Kempton, Hannah R; Crabtree, Gerald R; Feng, Guoping; Zhang, Feng | Cell reports | 28402856 | 2017 Apr 11 |
| Glia initiate brain assembly through noncanonical Chimaerin-Furin axon guidance in C. elegans. | Rapti, Georgia; Li, Chang; Shan, Alan; Lu, Yun; Shaham, Shai | Nature neuroscience | 28846083 | 2017 Oct |
| Rapid molecular assays to study human centromere genomics. | Contreras-Galindo, Rafael; Fischer, Sabrina; Saha, Anjan K; Lundy, John D; Cervantes, Patrick W; Mourad, Mohamad; Wang, Claire; Qian, Brian; Dai, Manhong; Meng, Fan; Chinnaiyan, Arul; Omenn, Gilbert S; Kaplan, Mark H; Markovitz, David M | Genome research | 29141960 | 2017 Dec |
| Systems analysis of dynamic transcription factor activity identifies targets for treatment in Olaparib resistant cancer cells. | Decker, Joseph T; Hobson, Eric C; Zhang, Yining; Shin, Seungjin; Thomas, Alexandra L; Jeruss, Jacqueline S; Arnold, Kelly B; Shea, Lonnie D | Biotechnology and bioengineering | 28322442 | 2017 09 |
| The microRNA miR-31 inhibits CD8+ T cell function in chronic viral infection. | Moffett, Howell F; Cartwright, Adam N R; Kim, Hye-Jung; Godec, Jernej; Pyrdol, Jason; Äijö, Tarmo; Martinez, Gustavo J; Rao, Anjana; Lu, Jun; Golub, Todd R; Cantor, Harvey; Sharpe, Arlene H; Novina, Carl D; Wucherpfennig, Kai W | Nature immunology | 28530712 | 2017 Jul |
| CRISPR/Cas9-mediated PD-1 disruption enhances anti-tumor efficacy of human chimeric antigen receptor T cells. | Rupp, Levi J; Schumann, Kathrin; Roybal, Kole T; Gate, Rachel E; Ye, Chun J; Lim, Wendell A; Marson, Alexander | Scientific reports | 28389661 | 2017 04 07 |
| A single early-in-life macrolide course has lasting effects on murine microbial network topology and immunity. | Ruiz, Victoria E; Battaglia, Thomas; Kurtz, Zachary D; Bijnens, Luc; Ou, Amy; Engstrand, Isak; Zheng, Xuhui; Iizumi, Tadasu; Mullins, Briana J; Müller, Christian L; Cadwell, Ken; Bonneau, Richard; Perez-Perez, Guillermo I; Blaser, Martin J | Nature communications | 28894149 | 2017 Sep 11 |
| Recombinant Expression of Cyclotides Using Split Inteins. | Jagadish, Krishnappa; Camarero, Julio A | Methods in molecular biology (Clifton, N.J.) | 27714609 | 2017 |
| Cyclotides: Overview and Biotechnological Applications. | Gould, Andrew; Camarero, Julio A | Chembiochem : a European journal of chemical biology | 28544675 | 2017 Jul 18 |
| Inhibition of RAS function through targeting an allosteric regulatory site. | Spencer-Smith, Russell; Koide, Akiko; Zhou, Yong; Eguchi, Raphael R; Sha, Fern; Gajwani, Priyanka; Santana, Dianicha; Gupta, Ankit; Jacobs, Miranda; Herrero-Garcia, Erika; Cobbert, Jacqueline; Lavoie, Hugo; Smith, Matthew; Rajakulendran, Thanashan; Dowdell, Evan; Okur, Mustafa Nazir; Dementieva, Irina; Sicheri, Frank; Therrien, Marc; Hancock, John F; Ikura, Mitsuhiko; Koide, Shohei; O'Bryan, John P | Nature chemical biology | 27820802 | 2017 Jan |
| Novel targeted therapy for neuroblastoma: silencing the MXD3 gene using siRNA. | Duong, Connie; Yoshida, Sakiko; Chen, Cathy; Barisone, Gustavo; Diaz, Elva; Li, Yueju; Beckett, Laurel; Chung, Jong; Antony, Reuben; Nolta, Jan; Nitin, Nitin; Satake, Noriko | Pediatric research | 28419087 | 2017 Sep |
| Fair Play: A Study of Scientific Workforce Trainers' Experience Playing an Educational Video Game about Racial Bias. | Kaatz, Anna; Carnes, Molly; Gutierrez, Belinda; Savoy, Julia; Samuel, Clem; Filut, Amarette; Pribbenow, Christine Maidl | CBE life sciences education | 28450447 | 2017 |
| Cryo-EM Structures Reveal Mechanism and Inhibition of DNA Targeting by a CRISPR-Cas Surveillance Complex. | Guo, Tai Wei; Bartesaghi, Alberto; Yang, Hui; Falconieri, Veronica; Rao, Prashant; Merk, Alan; Eng, Edward T; Raczkowski, Ashleigh M; Fox, Tara; Earl, Lesley A; Patel, Dinshaw J; Subramaniam, Sriram | Cell | 28985564 | 2017 Oct 05 |
| Lipid specificity of the membrane binding domain of coagulation factor X. | Muller, M P; Wang, Y; Morrissey, J H; Tajkhorshid, E | Journal of thrombosis and haemostasis : JTH | 28782177 | 2017 Oct |
| 1H-Detected REDOR with Fast Magic-Angle Spinning of a Deuterated Protein. | Ghosh, Manali; Rienstra, Chad M | The journal of physical chemistry. B | 28816462 | 2017 Sep 14 |
| Selective Proteomic Analysis of Antibiotic-Tolerant Cellular Subpopulations in Pseudomonas aeruginosa Biofilms. | Babin, Brett M; Atangcho, Lydia; van Eldijk, Mark B; Sweredoski, Michael J; Moradian, Annie; Hess, Sonja; Tolker-Nielsen, Tim; Newman, Dianne K; Tirrell, David A | mBio | 29066549 | 2017 10 24 |
| Influence of feeding hematocrit and perfusion pressure on hematocrit reduction (Fåhraeus effect) in an artificial microvascular network. | Reinhart, Walter H; Piety, Nathaniel Z; Shevkoplyas, Sergey S | Microcirculation (New York, N.Y. : 1994) | 28801994 | 2017 Nov |
| Substituting Sodium Hydrosulfite with Sodium Metabisulfite Improves Long-Term Stability of a Distributable Paper-Based Test Kit for Point-of-Care Screening for Sickle Cell Anemia. | Torabian, Kian; Lezzar, Dalia; Piety, Nathaniel Z; George, Alex; Shevkoplyas, Sergey S | Biosensors | 28930183 | 2017 Sep 20 |
| A High-Performance Neural Prosthesis Incorporating Discrete State Selection With Hidden Markov Models. | Kao, Jonathan C; Nuyujukian, Paul; Ryu, Stephen I; Shenoy, Krishna V | IEEE transactions on bio-medical engineering | 27337709 | 2017 04 |
| Human Astrocyte Maturation Captured in 3D Cerebral Cortical Spheroids Derived from Pluripotent Stem Cells. | Sloan, Steven A; Darmanis, Spyros; Huber, Nina; Khan, Themasap A; Birey, Fikri; Caneda, Christine; Reimer, Richard; Quake, Stephen R; Barres, Ben A; Paşca, Sergiu P | Neuron | 28817799 | 2017 Aug 16 |
| Comprehensive Identification of mRNA Polyadenylation Sites by PAPERCLIP. | Hwang, Hun-Way; Darnell, Robert B | Methods in molecular biology (Clifton, N.J.) | 28766291 | 2017 |
| Trade-off between Transcriptome Plasticity and Genome Evolution in Cephalopods. | Liscovitch-Brauer, Noa; Alon, Shahar; Porath, Hagit T; Elstein, Boaz; Unger, Ron; Ziv, Tamar; Admon, Arie; Levanon, Erez Y; Rosenthal, Joshua J C; Eisenberg, Eli | Cell | 28388405 | 2017 Apr 06 |
| Bioconjugated Nanoparticles for Biosensing, in Vivo Imaging, and Medical Diagnostics. | Kairdolf, Brad A; Qian, Ximei; Nie, Shuming | Analytical chemistry | 28043119 | 2017 Jan 17 |
| Predicting Heart Rejection Using Histopathological Whole-Slide Imaging and Deep Neural Network with Dropout. | Tong, Li; Hoffman, Ryan; Deshpande, Shriprasad R; Wang, May D | ... IEEE-EMBS International Conference on Biomedical and Health Informatics. IEEE-EMBS International Conference on Biomedical and Health Informatics | 32601619 | 2017 Feb |
| Theoretical model for optical oximetry at the capillary level: exploring hemoglobin oxygen saturation through backscattering of single red blood cells. | Liu, Rongrong; Spicer, Graham; Chen, Siyu; Zhang, Hao F; Yi, Ji; Backman, Vadim | Journal of biomedical optics | 28157244 | 2017 Feb 01 |
| Inducible Activation of MyD88 and CD40 in CAR T Cells Results in Controllable and Potent Antitumor Activity in Preclinical Solid Tumor Models. | Mata, Melinda; Gerken, Claudia; Nguyen, Phuong; Krenciute, Giedre; Spencer, David M; Gottschalk, Stephen | Cancer discovery | 28801306 | 2017 Nov |
| Direct measurement of hypoxia in a xenograft multiple myeloma model by optical-resolution photoacoustic microscopy. | Imai, Toru; Muz, Barbara; Yeh, Cheng-Hung; Yao, Junjie; Zhang, Ruiying; Azab, Abdel Kareem; Wang, Lihong | Cancer biology & therapy | 28045569 | 2017 02 |
| Proximity Biotinylation as a Method for Mapping Proteins Associated with mtDNA in Living Cells. | Han, Shuo; Udeshi, Namrata D; Deerinck, Thomas J; Svinkina, Tanya; Ellisman, Mark H; Carr, Steven A; Ting, Alice Y | Cell chemical biology | 28238724 | 2017 Mar 16 |
| An Approach to Spatiotemporally Resolve Protein Interaction Networks in Living Cells. | Lobingier, Braden T; Hüttenhain, Ruth; Eichel, Kelsie; Miller, Kenneth B; Ting, Alice Y; von Zastrow, Mark; Krogan, Nevan J | Cell | 28388416 | 2017 Apr 06 |
| Proteomic mapping of cytosol-facing outer mitochondrial and ER membranes in living human cells by proximity biotinylation. | Hung, Victoria; Lam, Stephanie S; Udeshi, Namrata D; Svinkina, Tanya; Guzman, Gaelen; Mootha, Vamsi K; Carr, Steven A; Ting, Alice Y | eLife | 28441135 | 2017 Apr 25 |
| Rapid, ultra low coverage copy number profiling of cell-free DNA as a precision oncology screening strategy. | Hovelson, Daniel H; Liu, Chia-Jen; Wang, Yugang; Kang, Qing; Henderson, James; Gursky, Amy; Brockman, Scott; Ramnath, Nithya; Krauss, John C; Talpaz, Moshe; Kandarpa, Malathi; Chugh, Rashmi; Tuck, Missy; Herman, Kirk; Grasso, Catherine S; Quist, Michael J; Feng, Felix Y; Haakenson, Christine; Langmore, John; Kamberov, Emmanuel; Tesmer, Tim; Husain, Hatim; Lonigro, Robert J; Robinson, Dan; Smith, David C; Alva, Ajjai S; Hussain, Maha H; Chinnaiyan, Arul M; Tewari, Muneesh; Mills, Ryan E; Morgan, Todd M; Tomlins, Scott A | Oncotarget | 29163793 | 2017 Oct 27 |
| Induced Pluripotent Stem Cell Differentiation Enables Functional Validation of GWAS Variants in Metabolic Disease. | Warren, Curtis R; O'Sullivan, John F; Friesen, Max; Becker, Caroline E; Zhang, Xiaoling; Liu, Poching; Wakabayashi, Yoshiyuki; Morningstar, Jordan E; Shi, Xu; Choi, Jihoon; Xia, Fang; Peters, Derek T; Florido, Mary H C; Tsankov, Alexander M; Duberow, Eilene; Comisar, Lauren; Shay, Jennifer; Jiang, Xin; Meissner, Alexander; Musunuru, Kiran; Kathiresan, Sekar; Daheron, Laurence; Zhu, Jun; Gerszten, Robert E; Deo, Rahul C; Vasan, Ramachandran S; O'Donnell, Christopher J; Cowan, Chad A | Cell stem cell | 28388431 | 2017 Apr 06 |
| A Genetic Variant Associated with Five Vascular Diseases Is a Distal Regulator of Endothelin-1 Gene Expression. | Gupta, Rajat M; Hadaya, Joseph; Trehan, Aditi; Zekavat, Seyedeh M; Roselli, Carolina; Klarin, Derek; Emdin, Connor A; Hilvering, Catharina R E; Bianchi, Valerio; Mueller, Christian; Khera, Amit V; Ryan, Russell J H; Engreitz, Jesse M; Issner, Robbyn; Shoresh, Noam; Epstein, Charles B; de Laat, Wouter; Brown, Jonathan D; Schnabel, Renate B; Bernstein, Bradley E; Kathiresan, Sekar | Cell | 28753427 | 2017 Jul 27 |
| Interplay between diet, gut microbiota, epigenetic events, and colorectal cancer. | Bultman, Scott J | Molecular nutrition & food research | 27138454 | 2017 Jan |
| Self-renewing Monolayer of Primary Colonic or Rectal Epithelial Cells. | Wang, Yuli; DiSalvo, Matthew; Gunasekara, Dulan B; Dutton, Johanna; Proctor, Angela; Lebhar, Michael S; Williamson, Ian A; Speer, Jennifer; Howard, Riley L; Smiddy, Nicole M; Bultman, Scott J; Sims, Christopher E; Magness, Scott T; Allbritton, Nancy L | Cellular and molecular gastroenterology and hepatology | 29204504 | 2017 Jul |
| A Systematic Approach for Developing Bacteria-Specific Imaging Tracers. | Ordonez, Alvaro A; Weinstein, Edward A; Bambarger, Lauren E; Saini, Vikram; Chang, Yong S; DeMarco, Vincent P; Klunk, Mariah H; Urbanowski, Michael E; Moulton, Kimberly L; Murawski, Allison M; Pokkali, Supriya; Kalinda, Alvin S; Jain, Sanjay K | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 27635025 | 2017 Jan |
| Metabolomic network analysis of estrogen-stimulated MCF-7 cells: a comparison of overrepresentation analysis, quantitative enrichment analysis and pathway analysis versus metabolite network analysis. | Maertens, Alexandra; Bouhifd, Mounir; Zhao, Liang; Odwin-DaCosta, Shelly; Kleensang, Andre; Yager, James D; Hartung, Thomas | Archives of toxicology | 27039105 | 2017 Jan |
| Systems Toxicology: Real World Applications and Opportunities. | Hartung, Thomas; FitzGerald, Rex E; Jennings, Paul; Mirams, Gary R; Peitsch, Manuel C; Rostami-Hodjegan, Amin; Shah, Imran; Wilks, Martin F; Sturla, Shana J | Chemical research in toxicology | 28362102 | 2017 04 17 |
| Development and validation of a high-throughput transcriptomic biomarker to address 21st century genetic toxicology needs. | Li, Heng-Hong; Chen, Renxiang; Hyduke, Daniel R; Williams, Andrew; Frötschl, Roland; Ellinger-Ziegelbauer, Heidrun; O'Lone, Raegan; Yauk, Carole L; Aubrecht, Jiri; Fornace Jr, Albert J | Proceedings of the National Academy of Sciences of the United States of America | 29203651 | 2017 Dec 19 |
| Are Female Applicants Disadvantaged in National Institutes of Health Peer Review? Combining Algorithmic Text Mining and Qualitative Methods to Detect Evaluative Differences in R01 Reviewers' Critiques. | Magua, Wairimu; Zhu, Xiaojin; Bhattacharya, Anupama; Filut, Amarette; Potvien, Aaron; Leatherberry, Renee; Lee, You-Geon; Jens, Madeline; Malikireddy, Dastagiri; Carnes, Molly; Kaatz, Anna | Journal of women's health (2002) | 28281870 | 2017 May |
| Write More Articles, Get More Grants: The Impact of Department Climate on Faculty Research Productivity. | Sheridan, Jennifer; Savoy, Julia N; Kaatz, Anna; Lee, You-Geon; Filut, Amarette; Carnes, Molly | Journal of women's health (2002) | 28375751 | 2017 May |
| Laughter and the Management of Divergent Positions in Peer Review Interactions. | Raclaw, Joshua; Ford, Cecilia E | Journal of pragmatics | 29170594 | 2017 May |
| Value-Based Standards Guide Sexism Inferences for Self and Others. | Mitamura, Chelsea; Erickson, Lynnsey; Devine, Patricia G | Journal of experimental social psychology | 29230069 | 2017 Sep |
| A Gender Bias Habit-Breaking Intervention Led to Increased Hiring of Female Faculty in STEMM Departments. | Devine, Patricia G; Forscher, Patrick S; Cox, William T L; Kaatz, Anna; Sheridan, Jennifer; Carnes, Molly | Journal of experimental social psychology | 29249837 | 2017 Nov |
| Unique versus Redundant Functions of Neuroligin Genes in Shaping Excitatory and Inhibitory Synapse Properties. | Chanda, Soham; Hale, W Dylan; Zhang, Bo; Wernig, Marius; Südhof, Thomas C | The Journal of neuroscience : the official journal of the Society for Neuroscience | 28607166 | 2017 Jul 19 |
| Cerebellins are differentially expressed in selective subsets of neurons throughout the brain. | Seigneur, Erica; Südhof, Thomas C | The Journal of comparative neurology | 28714144 | 2017 Oct 15 |
| Engineering genetic circuit interactions within and between synthetic minimal cells. | Adamala, Katarzyna P; Martin-Alarcon, Daniel A; Guthrie-Honea, Katriona R; Boyden, Edward S | Nature chemistry | 28430194 | 2017 May |
| Noninvasive Deep Brain Stimulation via Temporally Interfering Electric Fields. | Grossman, Nir; Bono, David; Dedic, Nina; Kodandaramaiah, Suhasa B; Rudenko, Andrii; Suk, Ho-Jun; Cassara, Antonino M; Neufeld, Esra; Kuster, Niels; Tsai, Li-Huei; Pascual-Leone, Alvaro; Boyden, Edward S | Cell | 28575667 | 2017 Jun 01 |
| CRISPR-Cas encoding of a digital movie into the genomes of a population of living bacteria. | Shipman, Seth L; Nivala, Jeff; Macklis, Jeffrey D; Church, George M | Nature | 28700573 | 2017 Jul 20 |
| Rapid Sequential in Situ Multiplexing with DNA Exchange Imaging in Neuronal Cells and Tissues. | Wang, Yu; Woehrstein, Johannes B; Donoghue, Noah; Dai, Mingjie; Avendaño, Maier S; Schackmann, Ron C J; Zoeller, Jason J; Wang, Shan Shan H; Tillberg, Paul W; Park, Demian; Lapan, Sylvain W; Boyden, Edward S; Brugge, Joan S; Kaeser, Pascal S; Church, George M; Agasti, Sarit S; Jungmann, Ralf; Yin, Peng | Nano letters | 28933153 | 2017 10 11 |
| Expansion Mini-Microscopy: An Enabling Alternative in Point-of-Care Diagnostics. | Zhang, Yu Shrike; Santiago, Grissel Trujillo-de; Alvarez, Mario Moisés; Schiff, Steven J; Boyden, Edward S; Khademhosseini, Ali | Current opinion in biomedical engineering | 29062977 | 2017 Mar |
| Adaptive optics improves multiphoton super-resolution imaging. | Zheng, Wei; Wu, Yicong; Winter, Peter; Fischer, Robert; Nogare, Damian Dalle; Hong, Amy; McCormick, Chad; Christensen, Ryan; Dempsey, William P; Arnold, Don B; Zimmerberg, Joshua; Chitnis, Ajay; Sellers, James; Waterman, Clare; Shroff, Hari | Nature methods | 28628128 | 2017 Sep |
| Diversity and evolution of class 2 CRISPR-Cas systems. | Shmakov, Sergey; Smargon, Aaron; Scott, David; Cox, David; Pyzocha, Neena; Yan, Winston; Abudayyeh, Omar O; Gootenberg, Jonathan S; Makarova, Kira S; Wolf, Yuri I; Severinov, Konstantin; Zhang, Feng; Koonin, Eugene V | Nature reviews. Microbiology | 28111461 | 2017 Mar |
| Implications of human genetic variation in CRISPR-based therapeutic genome editing. | Scott, David A; Zhang, Feng | Nature medicine | 28759051 | 2017 Sep |
| Genome-scale activation screen identifies a lncRNA locus regulating a gene neighbourhood. | Joung, Julia; Engreitz, Jesse M; Konermann, Silvana; Abudayyeh, Omar O; Verdine, Vanessa K; Aguet, Francois; Gootenberg, Jonathan S; Sanjana, Neville E; Wright, Jason B; Fulco, Charles P; Tseng, Yuen-Yi; Yoon, Charles H; Boehm, Jesse S; Lander, Eric S; Zhang, Feng | Nature | 28792927 | 2017 08 17 |
| RNA editing with CRISPR-Cas13. | Cox, David B T; Gootenberg, Jonathan S; Abudayyeh, Omar O; Franklin, Brian; Kellner, Max J; Joung, Julia; Zhang, Feng | Science (New York, N.Y.) | 29070703 | 2017 11 24 |
| Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP). | Tighe, Scott; Afshinnekoo, Ebrahim; Rock, Tara M; McGrath, Ken; Alexander, Noah; McIntyre, Alexa; Ahsanuddin, Sofia; Bezdan, Daniela; Green, Stefan J; Joye, Samantha; Stewart Johnson, Sarah; Baldwin, Don A; Bivens, Nathan; Ajami, Nadim; Carmical, Joseph R; Herriott, Ian Charold; Colwell, Rita; Donia, Mohamed; Foox, Jonathan; Greenfield, Nick; Hunter, Tim; Hoffman, Jessica; Hyman, Joshua; Jorgensen, Ellen; Krawczyk, Diana; Lee, Jodie; Levy, Shawn; Garcia-Reyero, Natàlia; Settles, Matthew; Thomas, Kelley; Gómez, Felipe; Schriml, Lynn; Kyrpides, Nikos; Zaikova, Elena; Penterman, Jon; Mason, Christopher E | Journal of biomolecular techniques : JBT | 28337070 | 2017 Apr |
| Precision Metagenomics: Rapid Metagenomic Analyses for Infectious Disease Diagnostics and Public Health Surveillance. | Afshinnekoo, Ebrahim; Chou, Chou; Alexander, Noah; Ahsanuddin, Sofia; Schuetz, Audrey N; Mason, Christopher E | Journal of biomolecular techniques : JBT | 28337072 | 2017 04 |
| Assessment of REPLI-g Multiple Displacement Whole Genome Amplification (WGA) Techniques for Metagenomic Applications. | Ahsanuddin, Sofia; Afshinnekoo, Ebrahim; Gandara, Jorge; Hakyemezoğlu, Mustafa; Bezdan, Daniela; Minot, Samuel; Greenfield, Nick; Mason, Christopher E | Journal of biomolecular techniques : JBT | 28344519 | 2017 04 |
| Folate-dependent methylation of septins governs ciliogenesis during neural tube closure. | Toriyama, Manami; Toriyama, Michinori; Wallingford, John B; Finnell, Richard H | FASEB journal : official publication of the Federation of American Societies for Experimental Biology | 28432198 | 2017 Aug |
| Excess Translation of Epigenetic Regulators Contributes to Fragile X Syndrome and Is Alleviated by Brd4 Inhibition. | Korb, Erica; Herre, Margaret; Zucker-Scharff, Ilana; Gresack, Jodi; Allis, C David; Darnell, Robert B | Cell | 28823556 | 2017 Sep 07 |
| cTag-PAPERCLIP Reveals Alternative Polyadenylation Promotes Cell-Type Specific Protein Diversity and Shifts Araf Isoforms with Microglia Activation. | Hwang, Hun-Way; Saito, Yuhki; Park, Christopher Y; Blachère, Nathalie E; Tajima, Yoko; Fak, John J; Zucker-Scharff, Ilana; Darnell, Robert B | Neuron | 28910620 | 2017 Sep 13 |
| Flexible Near-Field Wireless Optoelectronics as Subdermal Implants for Broad Applications in Optogenetics. | Shin, Gunchul; Gomez, Adrian M; Al-Hasani, Ream; Jeong, Yu Ra; Kim, Jeonghyun; Xie, Zhaoqian; Banks, Anthony; Lee, Seung Min; Han, Sang Youn; Yoo, Chul Jong; Lee, Jong-Lam; Lee, Seung Hee; Kurniawan, Jonas; Tureb, Jacob; Guo, Zhongzhu; Yoon, Jangyeol; Park, Sung-Il; Bang, Sang Yun; Nam, Yoonho; Walicki, Marie C; Samineni, Vijay K; Mickle, Aaron D; Lee, Kunhyuk; Heo, Seung Yun; McCall, Jordan G; Pan, Taisong; Wang, Liang; Feng, Xue; Kim, Tae-Il; Kim, Jong Kyu; Li, Yuhang; Huang, Yonggang; Gereau 4th, Robert W; Ha, Jeong Sook; Bruchas, Michael R; Rogers, John A | Neuron | 28132830 | 2017 Feb 08 |
| Optogenetic silencing of nociceptive primary afferents reduces evoked and ongoing bladder pain. | Samineni, Vijay K; Mickle, Aaron D; Yoon, Jangyeol; Grajales-Reyes, Jose G; Pullen, Melanie Y; Crawford, Kaitlyn E; Noh, Kyung Nim; Gereau, Graydon B; Vogt, Sherri K; Lai, H Henry; Rogers, John A; Gereau 4th, Robert W | Scientific reports | 29158567 | 2017 Nov 20 |
| Designing Acellular Injectable Biomaterial Therapeutics for Treating Myocardial Infarction and Peripheral Artery Disease. | Hernandez, Melissa J; Christman, Karen L | JACC. Basic to translational science | 29057375 | 2017 Apr |
| Enzyme-Targeted Nanoparticles for Delivery to Ischemic Skeletal Muscle. | Ungerleider, J L; Kammeyer, J K; Braden, R L; Christman, K L; Gianneschi, N C | Polymer chemistry | 29098018 | 2017 Sep 14 |
| Pyocyanin degradation by a tautomerizing demethylase inhibits Pseudomonas aeruginosa biofilms. | Costa, Kyle C; Glasser, Nathaniel R; Conway, Stuart J; Newman, Dianne K | Science (New York, N.Y.) | 27940577 | 2017 Jan 13 |
| The Pyruvate and α-Ketoglutarate Dehydrogenase Complexes of Pseudomonas aeruginosa Catalyze Pyocyanin and Phenazine-1-carboxylic Acid Reduction via the Subunit Dihydrolipoamide Dehydrogenase. | Glasser, Nathaniel R; Wang, Benjamin X; Hoy, Julie A; Newman, Dianne K | The Journal of biological chemistry | 28174304 | 2017 Mar 31 |
| A Paper-Based Test for Screening Newborns for Sickle Cell Disease. | Piety, Nathaniel Z; George, Alex; Serrano, Sonia; Lanzi, Maria R; Patel, Palka R; Noli, Maria P; Kahan, Silvina; Nirenberg, Damian; Camanda, João F; Airewele, Gladstone; Shevkoplyas, Sergey S | Scientific reports | 28367971 | 2017 Apr 03 |
| Washing in hypotonic saline reduces the fraction of irreversibly-damaged cells in stored blood: a proof-of-concept study. | Xia, Hui; Khanal, Grishma; Strachan, Briony C; Vörös, Eszter; Piety, Nathaniel Z; Gifford, Sean C; Shevkoplyas, Sergey S | Blood transfusion = Trasfusione del sangue | 28686152 | 2017 Sep |
| Conversion of adult endothelium to immunocompetent haematopoietic stem cells. | Lis, Raphael; Karrasch, Charles C; Poulos, Michael G; Kunar, Balvir; Redmond, David; Duran, Jose G Barcia; Badwe, Chaitanya R; Schachterle, William; Ginsberg, Michael; Xiang, Jenny; Tabrizi, Arash Rafii; Shido, Koji; Rosenwaks, Zev; Elemento, Olivier; Speck, Nancy A; Butler, Jason M; Scandura, Joseph M; Rafii, Shahin | Nature | 28514438 | 2017 05 25 |
| Detection of an Integrin-Binding Mechanoswitch within Fibronectin during Tissue Formation and Fibrosis. | Cao, Lizhi; Nicosia, John; Larouche, Jacqueline; Zhang, Yuanyuan; Bachman, Haylee; Brown, Ashley C; Holmgren, Lars; Barker, Thomas H | ACS nano | 28699736 | 2017 Jul 25 |
| Nucleolar expansion and elevated protein translation in premature aging. | Buchwalter, Abigail; Hetzer, Martin W | Nature communications | 28855503 | 2017 08 30 |
| A novel humanized mouse model with significant improvement of class-switched, antigen-specific antibody production. | Yu, Hua; Borsotti, Chiara; Schickel, Jean-Nicolas; Zhu, Shu; Strowig, Till; Eynon, Elizabeth E; Frleta, Davor; Gurer, Cagan; Murphy, Andrew J; Yancopoulos, George D; Meffre, Eric; Manz, Markus G; Flavell, Richard A | Blood | 28077418 | 2017 02 23 |
| Engineering Therapeutic T Cells: From Synthetic Biology to Clinical Trials. | Esensten, Jonathan H; Bluestone, Jeffrey A; Lim, Wendell A | Annual review of pathology | 27959633 | 2017 Jan 24 |
| The Principles of Engineering Immune Cells to Treat Cancer. | Lim, Wendell A; June, Carl H | Cell | 28187291 | 2017 02 09 |
| Synthetic Immunology: Hacking Immune Cells to Expand Their Therapeutic Capabilities. | Roybal, Kole T; Lim, Wendell A | Annual review of immunology | 28446063 | 2017 Apr 26 |
| Description of two novel members of the family Erysipelotrichaceae: Ileibacterium valens gen. nov., sp. nov. and Dubosiella newyorkensis, gen. nov., sp. nov., from the murine intestine, and emendation to the description of Faecalibaculum rodentium. | Cox, Laura M; Sohn, Jiho; Tyrrell, Kerin L; Citron, Diane M; Lawson, Paul A; Patel, Nisha B; Iizumi, Tadasu; Perez-Perez, Guillermo I; Goldstein, Ellie J C; Blaser, Martin J | International journal of systematic and evolutionary microbiology | 28100298 | 2017 05 |
| Tissue-Integrating Oxygen Sensors: Continuous Tracking of Tissue Hypoxia. | Wisniewski, Natalie A; Nichols, Scott P; Gamsey, Soya J; Pullins, Steve; Au-Yeung, Kit Y; Klitzman, Bruce; Helton, Kristen L | Advances in experimental medicine and biology | 28685468 | 2017 |
| Sub-100-nm metafluorophores with digitally tunable optical properties self-assembled from DNA. | Woehrstein, Johannes B; Strauss, Maximilian T; Ong, Luvena L; Wei, Bryan; Zhang, David Y; Jungmann, Ralf; Yin, Peng | Science advances | 28691083 | 2017 06 |
| Clinically resolved psoriatic lesions contain psoriasis-specific IL-17-producing αβ T cell clones. | Matos, Tiago R; O'Malley, John T; Lowry, Elizabeth L; Hamm, David; Kirsch, Ilan R; Robins, Harlan S; Kupper, Thomas S; Krueger, James G; Clark, Rachael A | The Journal of clinical investigation | 28945199 | 2017 Nov 01 |
| Multidomain analyses of a longitudinal human microbiome intestinal cleanout perturbation experiment. | Fukuyama, Julia; Rumker, Laurie; Sankaran, Kris; Jeganathan, Pratheepa; Dethlefsen, Les; Relman, David A; Holmes, Susan P | PLoS computational biology | 28821012 | 2017 Aug |
| Fuelling the mechanisms of asthma: Increased fatty acid oxidation in inflammatory immune cells may represent a novel therapeutic target. | Al-Khami, A A; Ghonim, M A; Del Valle, L; Ibba, S V; Zheng, L; Pyakurel, K; Okpechi, S C; Garay, J; Wyczechowska, D; Sanchez-Pino, M D; Rodriguez, P C; Boulares, A H; Ochoa, A C | Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology | 28456994 | 2017 Sep |
| Nanoscale imaging of clinical specimens using pathology-optimized expansion microscopy. | Zhao, Yongxin; Bucur, Octavian; Irshad, Humayun; Chen, Fei; Weins, Astrid; Stancu, Andreea L; Oh, Eun-Young; DiStasio, Marcello; Torous, Vanda; Glass, Benjamin; Stillman, Isaac E; Schnitt, Stuart J; Beck, Andrew H; Boyden, Edward S | Nature biotechnology | 28714966 | 2017 Aug |
| Green fluorescent genetically encoded calcium indicator based on calmodulin/M13-peptide from fungi. | Barykina, Natalia V; Subach, Oksana M; Piatkevich, Kiryl D; Jung, Erica E; Malyshev, Aleksey Y; Smirnov, Ivan V; Bogorodskiy, Andrey O; Borshchevskiy, Valentin I; Varizhuk, Anna M; Pozmogova, Galina E; Boyden, Edward S; Anokhin, Konstantin V; Enikolopov, Grigori N; Subach, Fedor V | PloS one | 28837632 | 2017 |
| INTEGRATED MICROFLUIDIC SELEX USING FREE SOLUTION ELECTROKINETICS. | Olsen, Timothy R; Tapia-Alveal, Claudia; Yang, Kyung-Ae; Zhang, Xin; Pereira, Leonardo Joe; Farmakidis, Nickolaos; Pei, Renjun; Stojanovic, Milan N; Lin, Qiao | Journal of the Electrochemical Society | 29170564 | 2017 |
| Simultaneous detection of the subcellular localization of RNAs and proteins in cultured cells by combined multicolor RNA-FISH and IF. | Meyer, Cindy; Garzia, Aitor; Tuschl, Thomas | Methods (San Diego, Calif.) | 27664292 | 2017 Apr 15 |
| Optimization of PAR-CLIP for transcriptome-wide identification of binding sites of RNA-binding proteins. | Garzia, Aitor; Meyer, Cindy; Morozov, Pavel; Sajek, Marcin; Tuschl, Thomas | Methods (San Diego, Calif.) | 27765618 | 2017 Apr 15 |
| Investment in secreted enzymes during nutrient-limited growth is utility dependent. | Cezairliyan, Brent; Ausubel, Frederick M | Proceedings of the National Academy of Sciences of the United States of America | 28847943 | 2017 Sep 12 |
| Enhanced in vivo retention of low dose BMP-2 via heparin microparticle delivery does not accelerate bone healing in a critically sized femoral defect. | Hettiaratchi, Marian H; Rouse, Tel; Chou, Catherine; Krishnan, Laxminarayanan; Stevens, Hazel Y; Li, Mon-Tzu A; McDevitt, Todd C; Guldberg, Robert E | Acta biomaterialia | 28645809 | 2017 09 01 |
| Ribbon scanning confocal for high-speed high-resolution volume imaging of brain. | Watson, Alan M; Rose, Annika H; Gibson, Gregory A; Gardner, Christina L; Sun, Chengqun; Reed, Douglas S; Lam, L K Metthew; St Croix, Claudette M; Strick, Peter L; Klimstra, William B; Watkins, Simon C | PloS one | 28686653 | 2017 |
| mTORC1 Activation during Repeated Regeneration Impairs Somatic Stem Cell Maintenance. | Haller, Samantha; Kapuria, Subir; Riley, Rebeccah R; O'Leary, Monique N; Schreiber, Katherine H; Andersen, Julie K; Melov, Simon; Que, Jianwen; Rando, Thomas A; Rock, Jason; Kennedy, Brian K; Rodgers, Joseph T; Jasper, Heinrich | Cell stem cell | 29220665 | 2017 Dec 07 |
| An artificial niche preserves the quiescence of muscle stem cells and enhances their therapeutic efficacy. | Quarta, Marco; Brett, Jamie O; DiMarco, Rebecca; De Morree, Antoine; Boutet, Stephane C; Chacon, Robert; Gibbons, Michael C; Garcia, Victor A; Su, James; Shrager, Joseph B; Heilshorn, Sarah; Rando, Thomas A | Nature biotechnology | 27240197 | 2016 07 |
| Masters of Disguise: Antigenic Variation and the VSG Coat in Trypanosoma brucei. | Mugnier, Monica R; Stebbins, C Erec; Papavasiliou, F Nina | PLoS pathogens | 27583379 | 2016 Sep |
| Large-scale microfluidics providing high-resolution and high-throughput screening of Caenorhabditis elegans poly-glutamine aggregation model. | Mondal, Sudip; Hegarty, Evan; Martin, Chris; Gökçe, Sertan Kutal; Ghorashian, Navid; Ben-Yakar, Adela | Nature communications | 27725672 | 2016 Oct 11 |
| Effects of fluctuating temperature and food availability on reproduction and lifespan. | Schwartz, Tonia S; Pearson, Phillip; Dawson, John; Allison, David B; Gohlke, Julia M | Experimental gerontology | 27364192 | 2016 Dec 15 |
| Oxidative costs of reproduction in mouse strains selected for different levels of food intake and which differ in reproductive performance. | Jothery, Aqeel H Al; Vaanholt, Lobke M; Mody, Nimesh; Arnous, Anis; Lykkesfeldt, Jens; Bünger, Lutz; Hill, William G; Mitchell, Sharon E; Allison, David B; Speakman, John R | Scientific reports | 27841266 | 2016 Nov 14 |
| A High-Content, Phenotypic Screen Identifies Fluorouridine as an Inhibitor of Pyoverdine Biosynthesis and Pseudomonas aeruginosa Virulence. | Kirienko, Daniel R; Revtovich, Alexey V; Kirienko, Natalia V | mSphere | 27579370 | 2016 |
| Clonal Immunoglobulin against Lysolipids in the Origin of Myeloma. | Nair, Shiny; Branagan, Andrew R; Liu, Jun; Boddupalli, Chandra Sekhar; Mistry, Pramod K; Dhodapkar, Madhav V | The New England journal of medicine | 26863356 | 2016 Feb 11 |
| Peripheral blood CD34+ cells efficiently engraft human cytokine knock-in mice. | Saito, Yasuyuki; Ellegast, Jana M; Rafiei, Anahita; Song, Yuanbin; Kull, Daniel; Heikenwalder, Mathias; Rongvaux, Anthony; Halene, Stephanie; Flavell, Richard A; Manz, Markus G | Blood | 27543436 | 2016 10 06 |
| The oncogenic transcription factor c-Jun regulates glutaminase expression and sensitizes cells to glutaminase-targeted therapy. | Lukey, Michael J; Greene, Kai Su; Erickson, Jon W; Wilson, Kristin F; Cerione, Richard A | Nature communications | 27089238 | 2016 Apr 18 |
| Combination of an Integrin-Targeting NIR Tracer and an Ultrasensitive Spectroscopic Device for Intraoperative Detection of Head and Neck Tumor Margins and Metastatic Lymph Nodes. | Yoon, Younghyoun; Mohs, Aaron M; Mancini, Michael C; Nie, Shuming; Shim, Hyunsuk | Tomography (Ann Arbor, Mich.) | 27738656 | 2016 Sep |
| Genetic screens to study the immune system in cancer. | Wucherpfennig, Kai W; Cartwright, Adam Nr | Current opinion in immunology | 27309352 | 2016 Aug |
| Genetically Modified T-cell Therapy for the Treatment of Osteosarcoma: An Update. | DeRenzo, Christopher; Gottschalk, Stephen | Journal of clinical & cellular immunology | 27313973 | 2016 Apr |
| Genome-Wide Approaches to Defining Macrophage Identity and Function. | Fonseca, Gregory J; Seidman, Jason S; Glass, Christopher K | Microbiology spectrum | 28087927 | 2016 Oct |
| In vivo photoacoustic tomography of myoglobin oxygen saturation. | Lin, Li; Yao, Junjie; Li, Lei; Wang, Lihong V | Journal of biomedical optics | 26719943 | 2016 Jun |
| Tutorial on photoacoustic tomography. | Zhou, Yong; Yao, Junjie; Wang, Lihong V | Journal of biomedical optics | 27086868 | 2016 Jun |
| Focusing light through biological tissue and tissue-mimicking phantoms up to 9.6 cm in thickness with digital optical phase conjugation. | Shen, Yuecheng; Liu, Yan; Ma, Cheng; Wang, Lihong V | Journal of biomedical optics | 27533439 | 2016 Aug 01 |
| Space- and intensity-constrained reconstruction for compressed ultrafast photography. | Zhu, Liren; Chen, Yujia; Liang, Jinyang; Xu, Qiaofeng; Gao, Liang; Ma, Cheng; Wang, Lihong V | Optica | 28775997 | 2016 Jul |
| Engineering T Cells with Customized Therapeutic Response Programs Using Synthetic Notch Receptors. | Roybal, Kole T; Williams, Jasper Z; Morsut, Leonardo; Rupp, Levi J; Kolinko, Isabel; Choe, Joseph H; Walker, Whitney J; McNally, Krista A; Lim, Wendell A | Cell | 27693353 | 2016 Oct 06 |
| Reaching 200-ps timing resolution in a time-of-flight and depth-of-interaction positron emission tomography detector using phosphor-coated crystals and high-density silicon photomultipliers. | Kwon, Sun Il; Ferri, Alessandro; Gola, Alberto; Berg, Eric; Piemonte, Claudio; Cherry, Simon R; Roncali, Emilie | Journal of medical imaging (Bellingham, Wash.) | 27921069 | 2016 Oct |
| Imbalance in Resting State Functional Connectivity is Associated with Eating Behaviors and Adiposity in Children. | Chodkowski, BettyAnn A; Cowan, Ronald L; Niswender, Kevin D | Heliyon | 26878067 | 2016 Jan |
| Mopping up miRNA: An integrated HBV transcript disrupts liver homeostasis by sequestering miR-122. | Luna, Joseph M; Michailidis, Eleftherios; Rice, Charles M | Journal of hepatology | 26541590 | 2016 Feb |
| Superior In vivo Transduction of Human Hepatocytes Using Engineered AAV3 Capsid. | Vercauteren, Koen; Hoffman, Brad E; Zolotukhin, Irene; Keeler, Geoffrey D; Xiao, Jing W; Basner-Tschakarjan, Etiena; High, Katherine A; Ertl, Hildegund Cj; Rice, Charles M; Srivastava, Arun; de Jong, Ype P; Herzog, Roland W | Molecular therapy : the journal of the American Society of Gene Therapy | 27019999 | 2016 Jun |
| Humanized mice efficiently engrafted with fetal hepatoblasts and syngeneic immune cells develop human monocytes and NK cells. | Billerbeck, Eva; Mommersteeg, Michiel C; Shlomai, Amir; Xiao, Jing W; Andrus, Linda; Bhatta, Ankit; Vercauteren, Koen; Michailidis, Eleftherios; Dorner, Marcus; Krishnan, Anuradha; Charlton, Michael R; Chiriboga, Luis; Rice, Charles M; de Jong, Ype P | Journal of hepatology | 27151182 | 2016 Aug |
| Coproduction of healthcare service. | Batalden, Maren; Batalden, Paul; Margolis, Peter; Seid, Michael; Armstrong, Gail; Opipari-Arrigan, Lisa; Hartung, Hans | BMJ quality & safety | 26376674 | 2016 07 |
| Organoids as Models for Neoplastic Transformation. | Neal, James T; Kuo, Calvin J | Annual review of pathology | 26907527 | 2016 May 23 |
| Genome-Edited Human Pluripotent Stem Cell-Derived Macrophages as a Model of Reverse Cholesterol Transport--Brief Report. | Gupta, Rajat M; Meissner, Torsten B; Cowan, Chad A; Musunuru, Kiran | Arteriosclerosis, thrombosis, and vascular biology | 26543098 | 2016 Jan |
| Minireview: Genome Editing of Human Pluripotent Stem Cells for Modeling Metabolic Disease. | Yu, Haojie; Cowan, Chad A | Molecular endocrinology (Baltimore, Md.) | 27075706 | 2016 Jun |
| Crystal Structure of Cpf1 in Complex with Guide RNA and Target DNA. | Yamano, Takashi; Nishimasu, Hiroshi; Zetsche, Bernd; Hirano, Hisato; Slaymaker, Ian M; Li, Yinqing; Fedorova, Iana; Nakane, Takanori; Makarova, Kira S; Koonin, Eugene V; Ishitani, Ryuichiro; Zhang, Feng; Nureki, Osamu | Cell | 27114038 | 2016 May 05 |
| Prospective functional classification of all possible missense variants in PPARG. | Majithia, Amit R; Tsuda, Ben; Agostini, Maura; Gnanapradeepan, Keerthana; Rice, Robert; Peloso, Gina; Patel, Kashyap A; Zhang, Xiaolan; Broekema, Marjoleine F; Patterson, Nick; Duby, Marc; Sharpe, Ted; Kalkhoven, Eric; Rosen, Evan D; Barroso, Inês; Ellard, Sian; UK Monogenic Diabetes Consortium; Kathiresan, Sekar; Myocardial Infarction Genetics Consortium; O'Rahilly, Stephen; UK Congenital Lipodystrophy Consortium; Chatterjee, Krishna; Florez, Jose C; Mikkelsen, Tarjei; Savage, David B; Altshuler, David | Nature genetics | 27749844 | 2016 Dec |
| Celecoxib does not alter intestinal microbiome in a longitudinal diet-controlled study. | Bokulich, N A; Battaglia, T; Aleman, J O; Walker, J M; Blaser, M J; Holt, P R | Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases | 26806255 | 2016 May |
| Partial restoration of the microbiota of cesarean-born infants via vaginal microbial transfer. | Dominguez-Bello, Maria G; De Jesus-Laboy, Kassandra M; Shen, Nan; Cox, Laura M; Amir, Amnon; Gonzalez, Antonio; Bokulich, Nicholas A; Song, Se Jin; Hoashi, Marina; Rivera-Vinas, Juana I; Mendez, Keimari; Knight, Rob; Clemente, Jose C | Nature medicine | 26828196 | 2016 Mar |
| Antibiotic perturbation of the murine gut microbiome enhances the adiposity, insulin resistance, and liver disease associated with high-fat diet. | Mahana, Douglas; Trent, Chad M; Kurtz, Zachary D; Bokulich, Nicholas A; Battaglia, Thomas; Chung, Jennifer; Müller, Christian L; Li, Huilin; Bonneau, Richard A; Blaser, Martin J | Genome medicine | 27124954 | 2016 Apr 27 |
| Antibiotics, birth mode, and diet shape microbiome maturation during early life. | Bokulich, Nicholas A; Chung, Jennifer; Battaglia, Thomas; Henderson, Nora; Jay, Melanie; Li, Huilin; D Lieber, Arnon; Wu, Fen; Perez-Perez, Guillermo I; Chen, Yu; Schweizer, William; Zheng, Xuhui; Contreras, Monica; Dominguez-Bello, Maria Gloria; Blaser, Martin J | Science translational medicine | 27306664 | 2016 Jun 15 |
| The Role of CagA in the Gastric Biology of Helicobacter pylori. | Backert, Steffen; Blaser, Martin J | Cancer research | 27655809 | 2016 Jul 15 |
| The Human Microbiome before Birth. | Blaser, Martin J; Dominguez-Bello, Maria G | Cell host & microbe | 27832586 | 2016 Nov 09 |
| Design of Selective Substrates and Activity-Based Probes for Hydrolase Important for Pathogenesis 1 (HIP1) from Mycobacterium tuberculosis. | Lentz, Christian S; Ordonez, Alvaro A; Kasperkiewicz, Paulina; La Greca, Florencia; O'Donoghue, Anthony J; Schulze, Christopher J; Powers, James C; Craik, Charles S; Drag, Marcin; Jain, Sanjay K; Bogyo, Matthew | ACS infectious diseases | 27739665 | 2016 Nov 11 |
| miR-124-9-9* potentiates Ascl1-induced reprogramming of cultured Müller glia. | Wohl, Stefanie Gabriele; Reh, Thomas Andrew | Glia | 26732729 | 2016 May |
| Potential of Small Molecule-Mediated Reprogramming of Rod Photoreceptors to Treat Retinitis Pigmentosa. | Nakamura, Paul A; Tang, Shibing; Shimchuk, Andy A; Ding, Sheng; Reh, Thomas A | Investigative ophthalmology & visual science | 27893103 | 2016 Nov 01 |
| Identification of selective covalent inhibitors of platelet activating factor acetylhydrolase 1B2 from the screening of an oxadiazolone-capped peptoid-azapeptoid hybrid library. | Sarma, Bani Kanta; Liu, Xiaodan; Kodadek, Thomas | Bioorganic & medicinal chemistry | 27160052 | 2016 Sep 01 |
| Altering the Mitochondrial Fatty Acid Synthesis (mtFASII) Pathway Modulates Cellular Metabolic States and Bioactive Lipid Profiles as Revealed by Metabolomic Profiling. | Clay, Hayley B; Parl, Angelika K; Mitchell, Sabrina L; Singh, Larry; Bell, Lauren N; Murdock, Deborah G | PloS one | 26963735 | 2016 |
| Central insulin-like growth factor-1 (IGF-1) restores whole-body insulin action in a model of age-related insulin resistance and IGF-1 decline. | Huffman, Derek M; Farias Quipildor, Gabriela; Mao, Kai; Zhang, Xueying; Wan, Junxiang; Apontes, Pasha; Cohen, Pinchas; Barzilai, Nir | Aging cell | 26534869 | 2016 Feb |
| MOTS-c: A novel mitochondrial-derived peptide regulating muscle and fat metabolism. | Lee, Changhan; Kim, Kyung Hwa; Cohen, Pinchas | Free radical biology & medicine | 27216708 | 2016 11 |
| Effects of Sex, Strain, and Energy Intake on Hallmarks of Aging in Mice. | Mitchell, Sarah J; Madrigal-Matute, Julio; Scheibye-Knudsen, Morten; Fang, Evandro; Aon, Miguel; González-Reyes, José A; Cortassa, Sonia; Kaushik, Susmita; Gonzalez-Freire, Marta; Patel, Bindi; Wahl, Devin; Ali, Ahmed; Calvo-Rubio, Miguel; Burón, María I; Guiterrez, Vincent; Ward, Theresa M; Palacios, Hector H; Cai, Huan; Frederick, David W; Hine, Christopher; Broeskamp, Filomena; Habering, Lukas; Dawson, John; Beasley, T Mark; Wan, Junxiang; Ikeno, Yuji; Hubbard, Gene; Becker, Kevin G; Zhang, Yongqing; Bohr, Vilhelm A; Longo, Dan L; Navas, Placido; Ferrucci, Luigi; Sinclair, David A; Cohen, Pinchas; Egan, Josephine M; Mitchell, James R; Baur, Joseph A; Allison, David B; Anson, R Michael; Villalba, José M; Madeo, Frank; Cuervo, Ana Maria; Pearson, Kevin J; Ingram, Donald K; Bernier, Michel; de Cabo, Rafael | Cell metabolism | 27304509 | 2016 06 14 |
| FRET binding antenna reports spatiotemporal dynamics of GDI-Cdc42 GTPase interactions. | Hodgson, Louis; Spiering, Désirée; Sabouri-Ghomi, Mohsen; Dagliyan, Onur; DerMardirossian, Céline; Danuser, Gaudenz; Hahn, Klaus M | Nature chemical biology | 27501396 | 2016 Oct |
| Design of a MCoTI-Based Cyclotide with Angiotensin (1-7)-Like Activity. | Aboye, Teshome; Meeks, Christopher J; Majumder, Subhabrata; Shekhtman, Alexander; Rodgers, Kathleen; Camarero, Julio A | Molecules (Basel, Switzerland) | 26821010 | 2016 Jan 26 |
| Comparison of the peptide binding preferences of three closely related TRAF paralogs: TRAF2, TRAF3, and TRAF5. | Foight, Glenna Wink; Keating, Amy E | Protein science : a publication of the Protein Society | 26779844 | 2016 Jul |
| Complementation of mitochondrial electron transport chain by manipulation of the NAD+/NADH ratio. | Titov, Denis V; Cracan, Valentin; Goodman, Russell P; Peng, Jun; Grabarek, Zenon; Mootha, Vamsi K | Science (New York, N.Y.) | 27124460 | 2016 Apr 08 |
| BMI1 Regulation of Self-Renewal and Multipotency in Human Mesenchymal Stem Cells. | Jung, Yunjoon; Nolta, Jan A | Current stem cell research & therapy | 26763885 | 2016 |
| Human Mesenchymal Stem Cells Genetically Engineered to Overexpress Brain-derived Neurotrophic Factor Improve Outcomes in Huntington's Disease Mouse Models. | Pollock, Kari; Dahlenburg, Heather; Nelson, Haley; Fink, Kyle D; Cary, Whitney; Hendrix, Kyle; Annett, Geralyn; Torrest, Audrey; Deng, Peter; Gutierrez, Joshua; Nacey, Catherine; Pepper, Karen; Kalomoiris, Stefanos; D Anderson, Johnathon; McGee, Jeannine; Gruenloh, William; Fury, Brian; Bauer, Gerhard; Duffy, Alexandria; Tempkin, Theresa; Wheelock, Vicki; Nolta, Jan A | Molecular therapy : the journal of the American Society of Gene Therapy | 26765769 | 2016 May |
| Comprehensive Proteomic Analysis of Mesenchymal Stem Cell Exosomes Reveals Modulation of Angiogenesis via Nuclear Factor-KappaB Signaling. | Anderson, Johnathon D; Johansson, Henrik J; Graham, Calvin S; Vesterlund, Mattias; Pham, Missy T; Bramlett, Charles S; Montgomery, Elizabeth N; Mellema, Matt S; Bardini, Renee L; Contreras, Zelenia; Hoon, Madeline; Bauer, Gerhard; Fink, Kyle D; Fury, Brian; Hendrix, Kyle J; Chedin, Frederic; El-Andaloussi, Samir; Hwang, Billie; Mulligan, Michael S; Lehtiö, Janne; Nolta, Jan A | Stem cells (Dayton, Ohio) | 26782178 | 2016 Mar |
| "Next-generation" mesenchymal stem or stromal cells for the in vivo delivery of bioactive factors: progressing toward the clinic. | Nolta, Jan A | Transfusion | 27079315 | 2016 Apr |
| Engineered BDNF producing cells as a potential treatment for neurologic disease. | Deng, Peter; Anderson, Johnathon D; Yu, Abigail S; Annett, Geralyn; Fink, Kyle D; Nolta, Jan A | Expert opinion on biological therapy | 27159050 | 2016 08 |
| Preclinical evaluation of mesenchymal stem cells overexpressing VEGF to treat critical limb ischemia. | Beegle, Julie R; Magner, Nataly Lessa; Kalomoiris, Stefanos; Harding, Aja; Zhou, Ping; Nacey, Catherine; White, Jeannine Logan; Pepper, Karen; Gruenloh, William; Annett, Geralyn; Nolta, Jan A; Fierro, Fernando A | Molecular therapy. Methods & clinical development | 27610394 | 2016 |
| Physostigmine and Methylphenidate Induce Distinct Arousal States During Isoflurane General Anesthesia in Rats. | Kenny, Jonathan D; Chemali, Jessica J; Cotten, Joseph F; Van Dort, Christa J; Kim, Seong-Eun; Ba, Demba; Taylor, Norman E; Brown, Emery N; Solt, Ken | Anesthesia and analgesia | 26991753 | 2016 Nov |
| Detecting actively translated open reading frames in ribosome profiling data. | Calviello, Lorenzo; Mukherjee, Neelanjan; Wyler, Emanuel; Zauber, Henrik; Hirsekorn, Antje; Selbach, Matthias; Landthaler, Markus; Obermayer, Benedikt; Ohler, Uwe | Nature methods | 26657557 | 2016 Feb |
| Crossover Control Study of the Effect of Personal Care Products Containing Triclosan on the Microbiome. | Poole, Angela C; Pischel, Lauren; Ley, Catherine; Suh, Gina; Goodrich, Julia K; Haggerty, Thomas D; Ley, Ruth E; Parsonnet, Julie | mSphere | 27303746 | 2016 |
| Biosynthetic Polymers as Functional Materials. | Carlini, Andrea S; Adamiak, Lisa; Gianneschi, Nathan C | Macromolecules | 27375299 | 2016 Jun 28 |
| The physiology of growth arrest: uniting molecular and environmental microbiology. | Bergkessel, Megan; Basta, David W; Newman, Dianne K | Nature reviews. Microbiology | 27510862 | 2016 Aug 11 |
| Minnesota Resuscitation Consortium's Advanced Perfusion and Reperfusion Cardiac Life Support Strategy for Out-of-Hospital Refractory Ventricular Fibrillation. | Yannopoulos, Demetris; Bartos, Jason A; Martin, Cindy; Raveendran, Ganesh; Missov, Emil; Conterato, Marc; Frascone, R J; Trembley, Alexander; Sipprell, Kevin; John, Ranjit; George, Stephen; Carlson, Kathleen; Brunsvold, Melissa E; Garcia, Santiago; Aufderheide, Tom P | Journal of the American Heart Association | 27412906 | 2016 06 13 |
| The Metagenomics and Metadesign of the Subways and Urban Biomes (MetaSUB) International Consortium inaugural meeting report. | MetaSUB International Consortium | Microbiome | 27255532 | 2016 Jun 03 |
| Analogous Convergence of Sustained and Transient Inputs in Parallel On and Off Pathways for Retinal Motion Computation. | Greene, Matthew J; Kim, Jinseop S; Seung, H Sebastian; EyeWirers | Cell reports | 26904938 | 2016 Mar 01 |
| Lipoxin A4 inhibits microglial activation and reduces neuroinflammation and neuropathic pain after spinal cord hemisection. | Martini, Alessandra Cadete; Berta, Temugin; Forner, Stefânia; Chen, Gang; Bento, Allisson Freire; Ji, Ru-Rong; Rae, Giles Alexander | Journal of neuroinflammation | 27059991 | 2016 Apr 08 |
| Purification and Characterization of Progenitor and Mature Human Astrocytes Reveals Transcriptional and Functional Differences with Mouse. | Zhang, Ye; Sloan, Steven A; Clarke, Laura E; Caneda, Christine; Plaza, Colton A; Blumenthal, Paul D; Vogel, Hannes; Steinberg, Gary K; Edwards, Michael S B; Li, Gordon; Duncan 3rd, John A; Cheshier, Samuel H; Shuer, Lawrence M; Chang, Edward F; Grant, Gerald A; Gephart, Melanie G Hayden; Barres, Ben A | Neuron | 26687838 | 2016 Jan 06 |
| A Broad RNA Virus Survey Reveals Both miRNA Dependence and Functional Sequestration. | Scheel, Troels K H; Luna, Joseph M; Liniger, Matthias; Nishiuchi, Eiko; Rozen-Gagnon, Kathryn; Shlomai, Amir; Auray, Gaël; Gerber, Markus; Fak, John; Keller, Irene; Bruggmann, Rémy; Darnell, Robert B; Ruggli, Nicolas; Rice, Charles M | Cell host & microbe | 26962949 | 2016 Mar 09 |
| Spotlight on pain: optogenetic approaches for interrogating somatosensory circuits. | Copits, Bryan A; Pullen, Melanie Y; Gereau 4th, Robert W | Pain | 27340912 | 2016 11 |
| An efficient system for selectively altering genetic information within mRNAs. | Montiel-González, Maria Fernanda; Vallecillo-Viejo, Isabel C; Rosenthal, Joshua J C | Nucleic acids research | 27557710 | 2016 12 01 |
| p120-catenin prevents multinucleation through control of MKLP1-dependent RhoA activity during cytokinesis. | van de Ven, Robert A H; de Groot, Jolien S; Park, Danielle; van Domselaar, Robert; de Jong, Danielle; Szuhai, Karoly; van der Wall, Elsken; Rueda, Oscar M; Ali, H Raza; Caldas, Carlos; van Diest, Paul J; Hetzer, Martin W; Sahai, Erik; Derksen, Patrick W B | Nature communications | 28004812 | 2016 12 22 |
| Attenuation of β-Amyloid Deposition and Neurotoxicity by Chemogenetic Modulation of Neural Activity. | Yuan, Peng; Grutzendler, Jaime | The Journal of neuroscience : the official journal of the Society for Neuroscience | 26758850 | 2016 Jan 13 |
| Nanoscale imaging of RNA with expansion microscopy. | Chen, Fei; Wassie, Asmamaw T; Cote, Allison J; Sinha, Anubhav; Alon, Shahar; Asano, Shoh; Daugharthy, Evan R; Chang, Jae-Byum; Marblestone, Adam; Church, George M; Raj, Arjun; Boyden, Edward S | Nature methods | 27376770 | 2016 Aug |
| Nuclear RNA-seq of single neurons reveals molecular signatures of activation. | Lacar, Benjamin; Linker, Sara B; Jaeger, Baptiste N; Krishnaswami, Suguna R; Barron, Jerika J; Kelder, Martijn J E; Parylak, Sarah L; Paquola, Apuã C M; Venepally, Pratap; Novotny, Mark; O'Connor, Carolyn; Fitzpatrick, Conor; Erwin, Jennifer A; Hsu, Jonathan Y; Husband, David; McConnell, Michael J; Lasken, Roger; Gage, Fred H | Nature communications | 27090946 | 2016 Apr 19 |
| Environment-driven somatic mosaicism in brain disorders. | Bedrosian, Tracy A; Linker, Sara; Gage, Fred H | Genome medicine | 27215330 | 2016 May 23 |
| Emergence of a Homo sapiens-specific gene family and chromosome 16p11.2 CNV susceptibility. | Nuttle, Xander; Giannuzzi, Giuliana; Duyzend, Michael H; Schraiber, Joshua G; Narvaiza, Iñigo; Sudmant, Peter H; Penn, Osnat; Chiatante, Giorgia; Malig, Maika; Huddleston, John; Benner, Chris; Camponeschi, Francesca; Ciofi-Baffoni, Simone; Stessman, Holly A F; Marchetto, Maria C N; Denman, Laura; Harshman, Lana; Baker, Carl; Raja, Archana; Penewit, Kelsi; Janke, Nicolette; Tang, W Joyce; Ventura, Mario; Banci, Lucia; Antonacci, Francesca; Akey, Joshua M; Amemiya, Chris T; Gage, Fred H; Reymond, Alexandre; Eichler, Evan E | Nature | 27487209 | 2016 Aug 11 |
| L1-associated genomic regions are deleted in somatic cells of the healthy human brain. | Erwin, Jennifer A; Paquola, Apuã C M; Singer, Tatjana; Gallina, Iryna; Novotny, Mark; Quayle, Carolina; Bedrosian, Tracy A; Alves, Francisco I A; Butcher, Cheyenne R; Herdy, Joseph R; Sarkar, Anindita; Lasken, Roger S; Muotri, Alysson R; Gage, Fred H | Nature neuroscience | 27618310 | 2016 Dec |
| A Neural Basis for Control of Cichlid Female Reproductive Behavior by Prostaglandin F2α. | Juntti, Scott A; Hilliard, Austin T; Kent, Kai R; Kumar, Anusha; Nguyen, Andrew; Jimenez, Mariana A; Loveland, Jasmine L; Mourrain, Philippe; Fernald, Russell D | Current biology : CB | 26996507 | 2016 Apr 04 |
| In vivo genome editing improves muscle function in a mouse model of Duchenne muscular dystrophy. | Nelson, Christopher E; Hakim, Chady H; Ousterout, David G; Thakore, Pratiksha I; Moreb, Eirik A; Castellanos Rivera, Ruth M; Madhavan, Sarina; Pan, Xiufang; Ran, F Ann; Yan, Winston X; Asokan, Aravind; Zhang, Feng; Duan, Dongsheng; Gersbach, Charles A | Science (New York, N.Y.) | 26721684 | 2016 Jan 22 |
| An RNA-aptamer-based two-color CRISPR labeling system. | Wang, Siyuan; Su, Jun-Han; Zhang, Feng; Zhuang, Xiaowei | Scientific reports | 27229896 | 2016 May 27 |
| High Persister Mutants in Mycobacterium tuberculosis. | Torrey, Heather L; Keren, Iris; Via, Laura E; Lee, Jong Seok; Lewis, Kim | PloS one | 27176494 | 2016 |
| DADA2: High-resolution sample inference from Illumina amplicon data. | Callahan, Benjamin J; McMurdie, Paul J; Rosen, Michael J; Han, Andrew W; Johnson, Amy Jo A; Holmes, Susan P | Nature methods | 27214047 | 2016 07 |
| Development and evaluation of a host-targeted antiviral that abrogates herpes simplex virus replication through modulation of arginine-associated metabolic pathways. | Sanchez, Maria Dulfary; Ochoa, Augusto C; Foster, Timothy P | Antiviral research | 27192555 | 2016 08 |
| Intronic polyadenylation of PDGFRα in resident stem cells attenuates muscle fibrosis. | Mueller, Alisa A; van Velthoven, Cindy T; Fukumoto, Kathryn D; Cheung, Tom H; Rando, Thomas A | Nature | 27894125 | 2016 12 08 |
| Stress-induced activation of brown adipose tissue prevents obesity in conditions of low adaptive thermogenesis. | Razzoli, Maria; Frontini, Andrea; Gurney, Allison; Mondini, Eleonora; Cubuk, Cankut; Katz, Liora S; Cero, Cheryl; Bolan, Patrick J; Dopazo, Joaquin; Vidal-Puig, Antonio; Cinti, Saverio; Bartolomucci, Alessandro | Molecular metabolism | 26844204 | 2016 Jan |
| Sex Differences in Lifespan. | Austad, Steven N; Fischer, Kathleen E | Cell metabolism | 27304504 | 2016 Jun 14 |
| Tribbles ortholog NIPI-3 and bZIP transcription factor CEBP-1 regulate a Caenorhabditis elegans intestinal immune surveillance pathway. | McEwan, Deborah L; Feinbaum, Rhonda L; Stroustrup, Nicholas; Haas, Wilhelm; Conery, Annie L; Anselmo, Anthony; Sadreyev, Ruslan; Ausubel, Frederick M | BMC biology | 27927200 | 2016 12 07 |
| Engineering Customized Cell Sensing and Response Behaviors Using Synthetic Notch Receptors. | Morsut, Leonardo; Roybal, Kole T; Xiong, Xin; Gordley, Russell M; Coyle, Scott M; Thomson, Matthew; Lim, Wendell A | Cell | 26830878 | 2016 Feb 11 |
| Microenvironmental Control of Adipocyte Fate and Function. | Pope, Benjamin D; Warren, Curtis R; Parker, Kevin Kit; Cowan, Chad A | Trends in cell biology | 27268909 | 2016 10 |
| The Presence of Oxalobacter formigenes in the Microbiome of Healthy Young Adults. | Barnett, Clea; Nazzal, Lama; Goldfarb, David S; Blaser, Martin J | The Journal of urology | 26292041 | 2016 Feb |
| Nitrous oxide-induced slow and delta oscillations. | Pavone, Kara J; Akeju, Oluwaseun; Sampson, Aaron L; Ling, Kelly; Purdon, Patrick L; Brown, Emery N | Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology | 26118489 | 2016 Jan |
| Optogenetic activation of dopamine neurons in the ventral tegmental area induces reanimation from general anesthesia. | Taylor, Norman E; Van Dort, Christa J; Kenny, Jonathan D; Pei, JunZhu; Guidera, Jennifer A; Vlasov, Ksenia Y; Lee, Justin T; Boyden, Edward S; Brown, Emery N; Solt, Ken | Proceedings of the National Academy of Sciences of the United States of America | 27791160 | 2016 Nov 08 |
| Analysis of National Institutes of Health R01 Application Critiques, Impact, and Criteria Scores: Does the Sex of the Principal Investigator Make a Difference? | Kaatz, Anna; Lee, You-Geon; Potvien, Aaron; Magua, Wairimu; Filut, Amarette; Bhattacharya, Anupama; Leatherberry, Renee; Zhu, Xiaojin; Carnes, Molly | Academic medicine : journal of the Association of American Medical Colleges | 27276003 | 2016 08 |
| Electric-field-stimulated protein mechanics. | Hekstra, Doeke R; White, K Ian; Socolich, Michael A; Henning, Robert W; Šrajer, Vukica; Ranganathan, Rama | Nature | 27926732 | 2016 Dec 15 |
| A preliminary study of movement intensity during a Go/No-Go task and its association with ADHD outcomes and symptom severity. | Li, Fenghua; Zheng, Yi; Smith, Stephanie D; Shic, Frederick; Moore, Christina C; Zheng, Xixi; Qi, Yanjie; Liu, Zhengkui; Leckman, James F | Child and adolescent psychiatry and mental health | 27999615 | 2016 |
| Neurovascular and Immuno-Imaging: From Mechanisms to Therapies. Proceedings of the Inaugural Symposium. | Akassoglou, Katerina; Agalliu, Dritan; Chang, Christopher J; Davalos, Dimitrios; Grutzendler, Jaime; Hillman, Elizabeth M C; Khakh, Baljit S; Kleinfeld, David; McGavern, Dorian B; Nelson, Sarah J; Zlokovic, Berislav V | Frontiers in neuroscience | 26941593 | 2016 |
| Assembly and operation of the autopatcher for automated intracellular neural recording in vivo. | Kodandaramaiah, Suhasa B; Holst, Gregory L; Wickersham, Ian R; Singer, Annabelle C; Franzesi, Giovanni Talei; McKinnon, Michael L; Forest, Craig R; Boyden, Edward S | Nature protocols | 26938115 | 2016 Apr |
| Molecular recordings by directed CRISPR spacer acquisition. | Shipman, Seth L; Nivala, Jeff; Macklis, Jeffrey D; Church, George M | Science (New York, N.Y.) | 27284167 | 2016 Jul 29 |
| Conditional deletion of L1CAM in human neurons impairs both axonal and dendritic arborization and action potential generation. | Patzke, Christopher; Acuna, Claudio; Giam, Louise R; Wernig, Marius; Südhof, Thomas C | The Journal of experimental medicine | 27001749 | 2016 Apr 04 |
| Telomere shortening and metabolic compromise underlie dystrophic cardiomyopathy. | Chang, Alex Chia Yu; Ong, Sang-Ging; LaGory, Edward L; Kraft, Peggy E; Giaccia, Amato J; Wu, Joseph C; Blau, Helen M | Proceedings of the National Academy of Sciences of the United States of America | 27799523 | 2016 11 15 |
| Towards Organs on Demand: Breakthroughs and Challenges in Models of Organogenesis. | Francipane, Maria Giovanna; Lagasse, Eric | Current pathobiology reports | 28979828 | 2016 Sep |
| Appreciating the Nuance of Daily Symptom Variation to Individualize Patient Care. | Adler, Jeremy; Saeed, Shehzad A; Eslick, Ian S; Provost, Lloyd; Margolis, Peter A; Kaplan, Heather C |