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The search results on this publication page are automated on a monthly schedule based on acknowledgement of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.

Title Authors Journal PubMedID Publication Date
Immunogenicity of novel consensus-based DNA vaccines against avian influenza. Laddy, Dominick J; Yan, Jian; Corbitt, Natasha; Kobasa, Darwyn; Kobinger, Gary P; Weiner, David B Vaccine. 17306909 2007 Apr 20;
Femtosecond laser nanoaxotomy lab-on-a-chip for in vivo nerve regeneration studies. Guo, Samuel X; Bourgeois, Frederic; Chokshi, Trushal; Durr, Nicholas J; Hilliard, Massimo A; Chronis, Nikos; Ben-Yakar, Adela Nature methods. 18408725 2008 Jun;
Combined effects of IL-12 and electroporation enhances the potency of DNA vaccination in macaques. Hirao, Lauren A; Wu, Ling; Khan, Amir S; Hokey, David A; Yan, Jian; Dai, Anlan; Betts, Michael R; Draghia-Akli, Ruxandra; Weiner, David B Vaccine. 18430495 2008 Jun 13;
Immunogenicity of novel consensus-based DNA vaccines against Chikungunya virus. Muthumani, Karuppiah; Lankaraman, Katthikbabu M; Laddy, Dominick J; Sundaram, Senthil G; Chung, Christopher W; Sako, Eric; Wu, Ling; Khan, Amir; Sardesai, Niranjan; Kim, Joseph J; Vijayachari, Paluru; Weiner, David B Vaccine 18471943 2008 Sep 19
Ultrasound measurements of cavitation bubble radius for femtosecond laser-induced breakdown in water. Aglyamov, Salavat R; Karpiouk, Andrei B; Bourgeois, Frederic; Ben-Yakar, Adela; Emelianov, Stanislav Y Optics letters. 18552957 2008 Jun 15;
Quantitative ultrasound method to detect and monitor laser-induced cavitation bubbles. Karpiouk, Andrei B; Aglyamov, Salavat R; Bourgeois, Frederic; Ben-Yakar, Adela; Emelianov, Stanislav Y Journal of biomedical optics. 18601556 2008 May-Jun;
DNA vaccines: crossing a line in the sand. Introduction to special issue. Weiner, David B Vaccine. 18652867 2008 Sep 19;
Femtosecond laser nanoaxotomy properties and their effect on axonal recovery in C. elegans. Bourgeois, Frederic; Ben-Yakar, Adela Optics express. 18725955 2008 Apr 14;
A stochastic single-molecule event triggers phenotype switching of a bacterial cell. Choi, Paul J; Cai, Long; Frieda, Kirsten; Xie, X Sunney Science (New York, N.Y.) 18927393 2008 Oct 17
Transepithelial projections from basal cells are luminal sensors in pseudostratified epithelia. Shum, Winnie Wai Chi; Da Silva, Nicolas; McKee, Mary; Smith, Peter J S; Brown, Dennis; Breton, Sylvie Cell 19070580 2008 Dec 12
Ultrafast laser nanosurgery in microfluidics for genome-wide screenings. Ben-Yakar, Adela; Bourgeois, Frederic Current opinion in biotechnology. 19278850 2009 Feb;
Sustained in vitro intestinal epithelial culture within a Wnt-dependent stem cell niche. Ootani, Akifumi; Li, Xingnan; Sangiorgi, Eugenio; Ho, Quoc T; Ueno, Hiroo; Toda, Shuji; Sugihara, Hajime; Fujimoto, Kazuma; Weissman, Irving L; Capecchi, Mario R; Kuo, Calvin J Nature medicine 19398967 2009 Jun
High-power picosecond fiber source for coherent Raman microscopy. Kieu, Khanh; Saar, Brian G; Holtom, Gary R; Xie, X Sunney; Wise, Frank W Optics letters 19571996 2009 Jul 1
Systemic hypertension in two patients with ASL deficiency: a result of nitric oxide deficiency? Brunetti-Pierri, Nicola; Erez, Ayelet; Shchelochkov, Oleg; Craigen, William; Lee, Brendan Molecular genetics and metabolism 19592285 2009 Sep-Oct
Splicing up drug discovery. Cell-based expression and screening of genetically-encoded libraries of backbone-cyclized polypeptides. Sancheti, Harshkumar; Camarero, Julio A Advanced drug delivery reviews 19628015 2009 Sep 30
Structural basis for exquisite specificity of affinity clamps, synthetic binding proteins generated through directed domain-interface evolution. Huang, Jin; Makabe, Koki; Biancalana, Matthew; Koide, Akiko; Koide, Shohei Journal of molecular biology 19646997 2009 Oct 9
Expressed protein ligation: a resourceful tool to study protein structure and function. Berrade, Luis; Camarero, Julio A Cellular and molecular life sciences : CMLS 19685006 2009 Dec
In vivo biosynthesis of an Ala-scan library based on the cyclic peptide SFTI-1. Austin, Jeffrey; Kimura, Richard H; Woo, Youn-Hi; Camarero, Julio A Amino acids 19685144 2010 May
A method for decoding the neurophysiological spike-response transform. Stern, Estee; García-Crescioni, Keyla; Miller, Mark W; Peskin, Charles S; Brezina, Vladimir Journal of neuroscience methods 19695289 2009 Nov 15
Generation of new protein functions by nonhomologous combinations and rearrangements of domains and modules. Koide, Shohei Current opinion in biotechnology 19700302 2009 Aug
Optimizing the future for biotechnology therapies, the key role of protein engineering. Camarero, Julio A Advanced drug delivery reviews. 19735684 2009 Sep 30;
Large A-fiber activity is required for microglial proliferation and p38 MAPK activation in the spinal cord: different effects of resiniferatoxin and bupivacaine on spinal microglial changes after spared nerve injury. Suter, Marc R; Berta, Temugin; Gao, Yong-Jing; Decosterd, Isabelle; Ji, Ru-Rong Molecular pain 19772627 2009
Biosynthesis and biological screening of a genetically encoded library based on the cyclotide MCoTI-I. Austin, Jeffrey; Wang, Wan; Puttamadappa, Swamy; Shekhtman, Alexander; Camarero, Julio A Chembiochem : a European journal of chemical biology 19780078 2009 Nov 2
Feedback from peripheral musculature to central pattern generator in the neurogenic heart of the crab Callinectes sapidus: role of mechanosensitive dendrites. García-Crescioni, Keyla; Fort, Timothy J; Stern, Estee; Brezina, Vladimir; Miller, Mark W Journal of neurophysiology 19828726 2010 Jan
Microfluidics for the analysis of behavior, nerve regeneration, and neural cell biology in C. elegans. Ben-Yakar, Adela; Chronis, Nikos; Lu, Hang Current opinion in neurobiology. 19896831 2009 Oct;
A peptide tag system for facile purification and single-molecule immobilization. Huang, Jin; Nagy, Stanislav S; Koide, Akiko; Rock, Ronald S; Koide, Shohei Biochemistry 19928925 2009 Dec 22
The c-Jun N-terminal kinase 1 (JNK1) in spinal astrocytes is required for the maintenance of bilateral mechanical allodynia under a persistent inflammatory pain condition. Gao, Yong-Jing; Xu, Zhen-Zhong; Liu, Yen-Chin; Wen, Yeong-Ray; Decosterd, Isabelle; Ji, Ru-Rong Pain 20022176 2010 Feb
Comparative neurobiology of feeding in the opisthobranch sea slug, Aplysia, and the pulmonate snail, Helisoma: evolutionary considerations. Wentzell, Margaret M; Martínez-Rubio, Clarissa; Miller, Mark W; Murphy, A Don Brain, behavior and evolution 20029185 2009
Chemosensory organs as models of neuronal synapses. Shaham, Shai Nature reviews. Neuroscience. 20029439 2010 Mar;
Ki-67 staining for determination of rhesus macaque T cell proliferative responses ex vivo. Shedlock, Devon J; Talbott, Kendra T; Morrow, Matthew P; Ferraro, Bernadette; Hokey, David A; Muthumani, Karuppiah; Weiner, David B Cytometry. Part A : the journal of the International Society for Analytical Cytology 20104580 2010 Mar
RNAa is conserved in mammalian cells. Huang, Vera; Qin, Yi; Wang, Ji; Wang, Xiaoling; Place, Robert F; Lin, Guiting; Lue, Tom F; Li, Long-Cheng PloS one 20107511 2010
Chemokines, neuronal-glial interactions, and central processing of neuropathic pain. Gao, Yong-Jing; Ji, Ru-Rong Pharmacology & therapeutics 20117131 2010 Apr
Real-time imaging of hepatitis C virus infection using a fluorescent cell-based reporter system. Jones, Christopher T; Catanese, Maria Teresa; Law, Lok Man J; Khetani, Salman R; Syder, Andrew J; Ploss, Alexander; Oh, Thomas S; Schoggins, John W; MacDonald, Margaret R; Bhatia, Sangeeta N; Rice, Charles M Nature biotechnology 20118917 2010 Feb
Persistent donor cell gene expression among human induced pluripotent stem cells contributes to differences with human embryonic stem cells. Ghosh, Zhumur; Wilson, Kitchener D; Wu, Yi; Hu, Shijun; Quertermous, Thomas; Wu, Joseph C PloS one 20126639 2010
Persistent hepatitis C virus infection in microscale primary human hepatocyte cultures. Ploss, Alexander; Khetani, Salman R; Jones, Christopher T; Syder, Andrew J; Trehan, Kartik; Gaysinskaya, Valeriya A; Mu, Kathy; Ritola, Kimberly; Rice, Charles M; Bhatia, Sangeeta N Proceedings of the National Academy of Sciences of the United States of America 20133632 2010 Feb 16
Rational conversion of affinity reagents into label-free sensors for Peptide motifs by designed allostery. Huang, Jin; Koide, Shohei ACS chemical biology 20143785 2010 Mar 19
Ecto-5'-nucleotidase (CD73) inhibits nociception by hydrolyzing AMP to adenosine in nociceptive circuits. Sowa, Nathaniel A; Taylor-Blake, Bonnie; Zylka, Mark J The Journal of neuroscience : the official journal of the Society for Neuroscience 20147550 2010 Feb 10
The microRNA miR-124 controls gene expression in the sensory nervous system of Caenorhabditis elegans. Clark, Alejandra M; Goldstein, Leonard D; Tevlin, Maya; Tavaré, Simon; Shaham, Shai; Miska, Eric A Nucleic acids research. 20176573 2010 Jun;
New horizons for studying human hepatotropic infections. de Jong, Ype P; Rice, Charles M; Ploss, Alexander The Journal of clinical investigation 20179350 2010 Mar
Solute-free interfacial zones in polar liquids. Chai, Binghua; Pollack, Gerald H The journal of physical chemistry. B 20369860 2010 Apr 29
Antisense gets a grip on miR-122 in chimpanzees. Branch, Andrea D; Rice, Charles M Science translational medicine 20371461 2010 Jan 6
Resolvins RvE1 and RvD1 attenuate inflammatory pain via central and peripheral actions. Xu, Zhen-Zhong; Zhang, Ling; Liu, Tong; Park, Jong Yeon; Berta, Temugin; Yang, Rong; Serhan, Charles N; Ji, Ru-Rong Nature medicine 20383154 2010 May
Recombinant ecto-5'-nucleotidase (CD73) has long lasting antinociceptive effects that are dependent on adenosine A1 receptor activation. Sowa, Nathaniel A; Voss, Meagen K; Zylka, Mark J Molecular pain 20398264 2010
Photomodulation of protein trans-splicing through backbone photocaging of the DnaE split intein. Berrade, Luis; Kwon, Youngeun; Camarero, Julio A Chembiochem : a European journal of chemical biology 20512791 2010 Jul 5
Gene correction in human embryonic and induced pluripotent stem cells: promises and challenges ahead. Narsinh, Kazim H; Wu, Joseph C Molecular therapy : the journal of the American Society of Gene Therapy 20514030 2010 Jun
Dysregulation of the norepinephrine transporter sustains cortical hypodopaminergia and schizophrenia-like behaviors in neuronal rictor null mice. Siuta, Michael A; Robertson, Sabrina D; Kocalis, Heidi; Saunders, Christine; Gresch, Paul J; Khatri, Vivek; Shiota, Chiyo; Kennedy, J Philip; Lindsley, Craig W; Daws, Lynette C; Polley, Daniel B; Veenstra-Vanderweele, Jeremy; Stanwood, Gregg D; Magnuson, PLoS biology 20543991 2010
Cyclotides, a promising molecular scaffold for peptide-based therapeutics. Jagadish, Krishnappa; Camarero, Julio A Biopolymers 20564025 2010
Glial cells and chronic pain. Gosselin, Romain-Daniel; Suter, Marc R; Ji, Ru-Rong; Decosterd, Isabelle The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry 20581331 2010 Oct
Needling adenosine receptors for pain relief. Zylka, Mark J Nature neuroscience 20581811 2010 Jul
Targeting microglial purinergic signaling to improve morphine analgesia. Ji, Ru-Rong Pain 20584568 2010 Sep
Discovery of a proneurogenic, neuroprotective chemical. Pieper, Andrew A; Xie, Shanhai; Capota, Emanuela; Estill, Sandi Jo; Zhong, Jeannie; Long, Jeffrey M; Becker, Ginger L; Huntington, Paula; Goldman, Shauna E; Shen, Ching-Han; Capota, Maria; Britt, Jeremiah K; Kotti, Tiina; Ure, Kerstin; Brat, Daniel J; Wil Cell 20603013 2010 Jul 9
DNA vaccines for targeting bacterial infections. Ingolotti, Mariana; Kawalekar, Omkar; Shedlock, Devon J; Muthumani, Karuppiah; Weiner, David B Expert review of vaccines 20624048 2010 Jul
Effects of long-term culture on human embryonic stem cell aging. Xie, Xiaoyan; Hiona, Asimina; Lee, Andrew Stephen; Cao, Feng; Huang, Mei; Li, Zongjin; Cherry, Athena; Pei, Xuetao; Wu, Joseph C Stem cells and development 20629482 2011 Jan
High-throughput in vivo vertebrate screening. Pardo-Martin, Carlos; Chang, Tsung-Yao; Koo, Bryan Kyo; Gilleland, Cody L; Wasserman, Steven C; Yanik, Mehmet Fatih Nature methods 20639868 2010 Aug
Strategies for discovering and derisking covalent, irreversible enzyme inhibitors. Johnson, Douglas S; Weerapana, Eranthie; Cravatt, Benjamin F Future medicinal chemistry 20640225 2010 Jun
Defining features and exploring chemical modifications to manipulate RNAa activity. Place, Robert F; Noonan, Emily J; Foldes-Papp, Zeno; Li, Long-Cheng Current pharmaceutical biotechnology 20662764 2010 Aug
Self-assembled nanoplatform for targeted delivery of chemotherapy agents via affinity-regulated molecular interactions. Park, Spencer; Kang, Sungkwon; Veach, Alexander J; Vedvyas, Yogindra; Zarnegar, Rasa; Kim, Ju-Young; Jin, Moonsoo M Biomaterials 20667589 2010 Oct
Assisted morphogenesis: glial control of dendrite shapes. Procko, Carl; Shaham, Shai Current opinion in cell biology. 20678911 2010 Oct;
Prostatic acid phosphatase reduces thermal sensitivity and chronic pain sensitization by depleting phosphatidylinositol 4,5-bisphosphate. Sowa, Nathaniel A; Street, Sarah E; Vihko, Pirkko; Zylka, Mark J The Journal of neuroscience : the official journal of the Society for Neuroscience 20685973 2010 Aug 4
Conversion of mouse epiblast stem cells to an earlier pluripotency state by small molecules. Zhou, Hongyan; Li, Wenlin; Zhu, Saiyong; Joo, Jin Young; Do, Jeong Tae; Xiong, Wen; Kim, Jeong Beom; Zhang, Kang; Scholer, Hans R; Ding, Sheng The Journal of biological chemistry 20705612 2010 Sep 24
Backbone dynamics of cyclotide MCoTI-I free and complexed with trypsin. Puttamadappa, Shadakshara S; Jagadish, Krishnappa; Shekhtman, Alexander; Camarero, Julio A Angewandte Chemie (International ed. in English) 20715250 2010 Sep 17
Light touch induces ERK activation in superficial dorsal horn neurons after inflammation: involvement of spinal astrocytes and JNK signaling in touch-evoked central sensitization and mechanical allodynia. Gao, Yong-Jing; Ji, Ru-Rong Journal of neurochemistry 20722971 2010 Oct
Spinal injection of TNF-ýý-activated astrocytes produces persistent pain symptom mechanical allodynia by releasing monocyte chemoattractant protein-1. Gao, Yong-Jing; Zhang, Ling; Ji, Ru-Rong Glia 20737477 2010 Nov 15
Using T. brucei as a biological epitope-display platform to elicit specific antibody responses. Stavropoulos, Pete; Papavasiliou, F Nina Journal of immunological methods 20800596 2010 Oct 31
Biological activities of natural and engineered cyclotides, a novel molecular scaffold for peptide-based therapeutics. Garcia, Angie E; Camarero, Julio A Current molecular pharmacology 20858197 2010 Nov 1
Morphology-guided graph search for untangling objects: C. elegans analysis. Raviv, Tammy Riklin; Ljosa, V; Conery, A L; Ausubel, F M; Carpenter, A E; Golland, P; Wahlby, C Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention 20879454 2010
Targeting astrocyte signaling for chronic pain. Gao, Yong-Jing; Ji, Ru-Rong Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics 20880510 2010 Oct
Mesenchymal stem cells for the sustained in vivo delivery of bioactive factors. Meyerrose, Todd; Olson, Scott; Pontow, Suzanne; Kalomoiris, Stefanos; Jung, Yunjoon; Annett, Geralyn; Bauer, Gerhard; Nolta, Jan A Advanced drug delivery reviews 20920540 2010 Sep 30
Advances and challenges in studying hepatitis C virus in its native environment. Sheahan, Timothy; Jones, Christopher T; Ploss, Alexander Expert review of gastroenterology & hepatology 20932139 2010 Oct
Emergence of Pseudomonas aeruginosa strains producing high levels of persister cells in patients with cystic fibrosis. Mulcahy, Lawrence R; Burns, Jane L; Lory, Stephen; Lewis, Kim Journal of bacteriology 20935098 2010 Dec
Recent insights into fatty acid acquisition and metabolism in malarial parasites. Jayabalasingham, Bamini; Menard, Robert; Fidock, David A F1000 biology reports 20948809 2010
Epistatic relationships reveal the functional organization of yeast transcription factors. Zheng, Jiashun; Benschop, Joris J; Shales, Michael; Kemmeren, Patrick; Greenblatt, Jack; Cagney, Gerard; Holstege, Frank; Li, Hao; Krogan, Nevan J Molecular systems biology 20959818 2010 Oct 5
Persisting water droplets on water surfaces. Klyuzhin, Ivan S; Ienna, Federico; Roeder, Brandon; Wexler, Adam; Pollack, Gerald H The journal of physical chemistry. B 20961076 2010 Nov 11
Growth factor regulation of proliferation and survival of multipotential stromal cells. Rodrigues, Melanie; Griffith, Linda G; Wells, Alan Stem cell research & therapy 20977782 2010
Importance of controlling nanotube density for highly sensitive and reliable biosensors functional in physiological conditions. Ishikawa, Fumiaki N; Curreli, Marco; Olson, C Anders; Liao, Hsiang-I; Sun, Ren; Roberts, Richard W; Cote, Richard J; Thompson, Mark E; Zhou, Chongwu ACS nano 21028792 2010 Nov 23
Helicobacter pylori and esophageal disease: wake-up call? Blaser, Martin J Gastroenterology 21029801 2010 Dec
Toll-like receptor 7 mediates pruritus. Liu, Tong; Xu, Zhen-Zhong; Park, Chul-Kyu; Berta, Temugin; Ji, Ru-Rong Nature neuroscience 21037581 2010 Dec
Rescue of lethal hepatic failure by hepatized lymph nodes in mice. Hoppo, Toshitaka; Komori, Junji; Manohar, Rohan; Stolz, Donna Beer; Lagasse, Eric Gastroenterology 21070777 2011 Feb
Mesenchymal stem cells for the treatment of neurodegenerative disease. Joyce, Nanette; Annett, Geralyn; Wirthlin, Louisa; Olson, Scott; Bauer, Gerhard; Nolta, Jan A Regenerative medicine 21082892 2010 Nov
Superfamily-wide portrait of serine hydrolase inhibition achieved by library-versus-library screening. Bachovchin, Daniel A; Ji, Tianyang; Li, Weiwei; Simon, Gabriel M; Blankman, Jacqueline L; Adibekian, Alexander; Hoover, Heather; Niessen, Sherry; Cravatt, Benjamin F Proceedings of the National Academy of Sciences of the United States of America 21084632 2010 Dec 7
Quantitative reactivity profiling predicts functional cysteines in proteomes. Weerapana, Eranthie; Wang, Chu; Simon, Gabriel M; Richter, Florian; Khare, Sagar; Dillon, Myles B D; Bachovchin, Daniel A; Mowen, Kerri; Baker, David; Cravatt, Benjamin F Nature 21085121 2010 Dec 9
Teaching new tricks to an old foe: murinizing hepatitis C virus. Gerold, Gisa; Rice, Charles M; Ploss, Alexander Hepatology (Baltimore, Md.). 21105113 2010 Dec;
Reprogramming of human primary somatic cells by OCT4 and chemical compounds. Zhu, Saiyong; Li, Wenlin; Zhou, Hongyan; Wei, Wanguo; Ambasudhan, Rajesh; Lin, Tongxiang; Kim, Janghwan; Zhang, Kang; Ding, Sheng Cell stem cell 21112560 2010 Dec 3
Emerging roles for ectonucleotidases in pain-sensing neurons. Street, Sarah E; Zylka, Mark J Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology. 21116251 2011 Jan;
Insulin regulation of monoamine signaling: pathway to obesity. Niswender, Kevin D; Daws, Lynette C; Avison, Malcolm J; Galli, Aurelio Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology 21116253 2011 Jan
Protein microarrays: novel developments and applications. Berrade, Luis; Garcia, Angie E; Camarero, Julio A Pharmaceutical research 21116694 2011 Jul
Video-rate molecular imaging in vivo with stimulated Raman scattering. Saar, Brian G; Freudiger, Christian W; Reichman, Jay; Stanley, C Michael; Holtom, Gary R; Xie, X Sunney Science (New York, N.Y.) 21127249 2010 Dec 3
NGSQC: cross-platform quality analysis pipeline for deep sequencing data. Dai, Manhong; Thompson, Robert C; Maher, Christopher; Contreras-Galindo, Rafael; Kaplan, Mark H; Markovitz, David M; Omenn, Gil; Meng, Fan BMC genomics 21143816 2010
Evaluation of combination therapy against hepatitis C virus infection in human liver chimeric mice. de Jong, Ype P; Rice, Charles M; Ploss, Alexander Journal of hepatology 21145816 2011 May
TNF-ýý contributes to spinal cord synaptic plasticity and inflammatory pain: distinct role of TNF receptor subtypes 1 and 2. Zhang, Ling; Berta, Temugin; Xu, Zhen-Zhong; Liu, Tong; Park, Jong Yeon; Ji, Ru-Rong Pain 21159431 2011 Feb
Prognostic value and function of KLF4 in prostate cancer: RNAa and vector-mediated overexpression identify KLF4 as an inhibitor of tumor cell growth and migration. Wang, Ji; Place, Robert F; Huang, Vera; Wang, Xiaoling; Noonan, Emily J; Magyar, Clara E; Huang, Jiaoti; Li, Long-Cheng Cancer research 21159640 2010 Dec 15
Synchronized time-lens source for coherent Raman scattering microscopy. Wang, Ke; Freudiger, Christian W; Lee, Jennifer H; Saar, Brian G; Xie, X Sunney; Xu, Chris Optics express 21164749 2010 Nov 8
Breaking the diffraction barrier: super-resolution imaging of cells. Huang, Bo; Babcock, Hazen; Zhuang, Xiaowei Cell 21168201 2010 Dec 23
Photoreactive stapled BH3 peptides to dissect the BCL-2 family interactome. Braun, Craig R; Mintseris, Julian; Gavathiotis, Evripidis; Bird, Gregory H; Gygi, Steven P; Walensky, Loren D Chemistry & biology 21168768 2010 Dec 22
How can we identify parasite genes that underlie antimalarial drug resistance? Anderson, Tim; Nkhoma, Standwell; Ecker, Andrea; Fidock, David Pharmacogenomics 21174623 2011 Jan
An essential role of the cysteine-rich domain of FZD4 in Norrin/Wnt signaling and familial exudative vitreoretinopathy. Zhang, Kang; Harada, Yuko; Wei, Xinran; Shukla, Dhananjay; Rajendran, Anand; Tawansy, Khaled; Bedell, Matthew; Lim, Sharon; Shaw, Peter X; He, Xi; Yang, Zhenglin The Journal of biological chemistry 21177847 2011 Mar 25
A spatial and temporal map of C. elegans gene expression. Spencer, W Clay; Zeller, Georg; Watson, Joseph D; Henz, Stefan R; Watkins, Kathie L; McWhirter, Rebecca D; Petersen, Sarah; Sreedharan, Vipin T; Widmer, Christian; Jo, Jeanyoung; Reinke, Valerie; Petrella, Lisa; Strome, Susan; Von Stetina, Stephen E; Katz, Menachem; Shaham, Shai; Rätsch, Gunnar; Miller 3rd, David M Genome research. 21177967 2011 Feb;
Proteolytic Activity Matrix Analysis (PrAMA) for simultaneous determination of multiple protease activities. Miller, Miles A; Barkal, Layla; Jeng, Karen; Herrlich, Andreas; Moss, Marcia; Griffith, Linda G; Lauffenburger, Douglas A Integrative biology : quantitative biosciences from nano to macro 21180771 2011 Apr
Development of proneurogenic, neuroprotective small molecules. MacMillan, Karen S; Naidoo, Jacinth; Liang, Jue; Melito, Lisa; Williams, Noelle S; Morlock, Lorraine; Huntington, Paula J; Estill, Sandi Jo; Longgood, Jamie; Becker, Ginger L; McKnight, Steven L; Pieper, Andrew A; De Brabander, Jef K; Ready, Joseph M Journal of the American Chemical Society 21210688 2011 Feb 9
Lung tissue mechanics as an emergent phenomenon. Suki, Bela; Bates, Jason H T Journal of applied physiology (Bethesda, Md. : 1985) 21212247 2011 Apr
Detection of circulating tumor cells in human peripheral blood using surface-enhanced Raman scattering nanoparticles. Wang, Xu; Qian, Ximei; Beitler, Jonathan J; Chen, Zhuo Georgia; Khuri, Fadlo R; Lewis, Melinda M; Shin, Hyung Ju C; Nie, Shuming; Shin, Dong M Cancer research. 21212408 2011 Mar 1;
Pain-relieving prospects for adenosine receptors and ectonucleotidases. Zylka, Mark J Trends in molecular medicine 21236731 2011 Apr
The reconstituted 'humanized liver' in TK-NOG mice is mature and functional. Hasegawa, Masami; Kawai, Kenji; Mitsui, Tetsuya; Taniguchi, Kenji; Monnai, Makoto; Wakui, Masatoshi; Ito, Mamoru; Suematsu, Makoto; Peltz, Gary; Nakamura, Masato; Suemizu, Hiroshi Biochemical and biophysical research communications 21238430 2011 Feb 18
A highly optimized DNA vaccine confers complete protective immunity against high-dose lethal lymphocytic choriomeningitis virus challenge. Shedlock, Devon J; Talbott, Kendra T; Cress, Christina; Ferraro, Bernadette; Tuyishme, Steven; Mallilankaraman, Karthik; Cisper, Neil J; Morrow, Matthew P; Wu, Stephan J; Kawalekar, Omkar U; Khan, Amir S; Sardesai, Niranjan Y; Muthumani, Karuppiah; Shen, Vaccine 21238574 2011 Sep 9
RNAi screening for fat regulatory genes with SRS microscopy. Wang, Meng C; Min, Wei; Freudiger, Christian W; Ruvkun, Gary; Xie, X Sunney Nature methods 21240281 2011 Feb
Efficient construction of sequence-specific TAL effectors for modulating mammalian transcription. Zhang, Feng; Cong, Le; Lodato, Simona; Kosuri, Sriram; Church, George M; Arlotta, Paola Nature biotechnology 21248753 2011 Feb
Development of human CD4+FoxP3+ regulatory T cells in human stem cell factor-, granulocyte-macrophage colony-stimulating factor-, and interleukin-3-expressing NOD-SCID IL2Rýý(null) humanized mice. Billerbeck, Eva; Barry, Walter T; Mu, Kathy; Dorner, Marcus; Rice, Charles M; Ploss, Alexander Blood 21252091 2011 Mar 17
Enduring prevention and transient reduction of postoperative pain by intrathecal resolvin D1. Huang, Liang; Wang, Chi-Fei; Serhan, Charles N; Strichartz, Gary Pain 21255928 2011 Mar
Dynamics of the translational machinery. Petrov, Alexey; Kornberg, Guy; O'Leary, Sean; Tsai, Albert; Uemura, Sotaro; Puglisi, Joseph D Current opinion in structural biology. 21256733 2011 Feb;
Light-induced effects on Brownian displacements. Bhalerao, Anish S; Pollack, Gerald H Journal of biophotonics 21287689 2011 Mar
A dense network of dendritic cells populates the murine epididymis. Da Silva, Nicolas; Cortez-Retamozo, Virna; Reinecker, Hans-Christian; Wildgruber, Moritz; Hill, Eric; Brown, Dennis; Swirski, Filip K; Pittet, Mikael J; Breton, Sylvie Reproduction (Cambridge, England) 21310816 2011 May
Argininosuccinate lyase deficiency-argininosuccinic aciduria and beyond. Erez, Ayelet; Nagamani, Sandesh C Sreenath; Lee, Brendan American journal of medical genetics. Part C, Seminars in medical genetics 21312326 2011 Feb 15
Single cell transcriptional profiling reveals heterogeneity of human induced pluripotent stem cells. Narsinh, Kazim H; Sun, Ning; Sanchez-Freire, Veronica; Lee, Andrew S; Almeida, Patricia; Hu, Shijun; Jan, Taha; Wilson, Kitchener D; Leong, Denise; Rosenberg, Jarrett; Yao, Mylene; Robbins, Robert C; Wu, Joseph C The Journal of clinical investigation 21317531 2011 Mar
Bioluminescence reporter gene imaging characterize human embryonic stem cell-derived teratoma formation. Su, Weijun; Zhou, Manqian; Zheng, Yizhou; Fan, Yan; Wang, Lina; Han, Zhongchao; Kong, Deling; Zhao, Robert Chunhua; Wu, Joseph C; Xiang, Rong; Li, Zongjin Journal of cellular biochemistry 21328457 2011 Mar
Images in clinical medicine. Carotid-cavernous sinus fistula. Korn, Bobby S; Zhang, Kang The New England journal of medicine 21345097 2011 Feb 24
Glia delimit shape changes of sensory neuron receptive endings in C. elegans. Procko, Carl; Lu, Yun; Shaham, Shai Development (Cambridge, England). 21350017 2011 Apr;
Short-term immunosuppression promotes engraftment of embryonic and induced pluripotent stem cells. Pearl, Jeremy I; Lee, Andrew S; Leveson-Gower, Dennis B; Sun, Ning; Ghosh, Zhumur; Lan, Feng; Ransohoff, Julia; Negrin, Robert S; Davis, Mark M; Wu, Joseph C Cell stem cell 21362570 2011 Mar 4
Effects of recruitment/derecruitment dynamics on the efficacy of variable ventilation. Ma, Baoshun; Suki, Bela; Bates, Jason H T Journal of applied physiology (Bethesda, Md. : 1985) 21372101 2011 May
Argonaute2 complexes carry a population of circulating microRNAs independent of vesicles in human plasma. Arroyo, Jason D; Chevillet, John R; Kroh, Evan M; Ruf, Ingrid K; Pritchard, Colin C; Gibson, Donald F; Mitchell, Patrick S; Bennett, Christopher F; Pogosova-Agadjanyan, Era L; Stirewalt, Derek L; Tait, Jonathan F; Tewari, Muneesh Proceedings of the National Academy of Sciences of the United States of America 21383194 2011 Mar 22
RESOLVING CLUSTERED WORMS VIA PROBABILISTIC SHAPE MODELS. Wahlby, Carolina; Riklin-Raviv, Tammy; Ljosa, Vebjorn; Conery, Annie L; Golland, Polina; Ausubel, Frederick M; Carpenter, Anne E Proceedings / IEEE International Symposium on Biomedical Imaging: from nano to macro. IEEE International Symposium on Biomedical Imaging 21383863 2010 Jun 21
Matrix control of scarring. Yates, Cecelia C; Bodnar, Richard; Wells, Alan Cellular and molecular life sciences : CMLS 21390544 2011 Jun
Axonal regeneration proceeds through specific axonal fusion in transected C. elegans neurons. Neumann, Brent; Nguyen, Ken C Q; Hall, David H; Ben-Yakar, Adela; Hilliard, Massimo A Developmental dynamics : an official publication of the American Association of Anatomists 21416556 2011 Jun
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Telomerase Therapy to Reverse Cardiovascular Senescence. Nazari-Shafti, Timo Z; Cooke, John P Methodist DeBakey cardiovascular journal 26634025 2015
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Secretome identification of immune cell factors mediating metastatic cell homing. Aguado, Brian A; Wu, Jia J; Azarin, Samira M; Nanavati, Dhaval; Rao, Shreyas S; Bushnell, Grace G; Medicherla, Chaitanya B; Shea, Lonnie D Scientific reports 26634905 2015 Dec 04
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Photoacoustic tomography of vascular compliance in humans. Hai, Pengfei; Zhou, Yong; Liang, Jinyang; Li, Chiye; Wang, Lihong V Journal of biomedical optics. 26720875 2015;
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Auto-deleting brain machine interface: Error detection using spiking neural activity in the motor cortex. Even-Chen, Nir; Stavisky, Sergey D; Kao, Jonathan C; Ryu, Stephen I; Shenoy, Krishna V Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. 26736203 2015;
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Detection of blur artifacts in histopathological whole-slide images of endomyocardial biopsies. Hang Wu; Phan, John H; Bhatia, Ajay K; Cundiff, Caitlin A; Shehata, Bahig M; Wang, May D Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. 26736365 2015;
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Early Access to the Cardiac Catheterization Laboratory for Patients Resuscitated From Cardiac Arrest Due to a Shockable Rhythm: The Minnesota Resuscitation Consortium Twin Cities Unified Protocol. Garcia, Santiago; Drexel, Todd; Bekwelem, Wobo; Raveendran, Ganesh; Caldwell, Emily; Hodgson, Lucinda; Wang, Qi; Adabag, Selcuk; Mahoney, Brian; Frascone, Ralph; Helmer, Gregory; Lick, Charles; Conterato, Marc; Baran, Kenneth; Bart, Bradley; Bachour, Fouad; Roh, Steven; Panetta, Carmelo; Stark, Randall; Haugland, Mark; Mooney, Michael; Wesley, Keith; Yannopoulos, Demetris Journal of the American Heart Association. 26744380 2016;
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Human Mesenchymal Stem Cells Genetically Engineered to Overexpress Brain-derived Neurotrophic Factor Improve Outcomes in Huntington's disease Mouse Models. Pollock, K; Dahlenburg, H; Nelson, H; Fink, K D; Cary, W; Hendrix, K; Annett, G; Torrest, A; Deng, P; Gutierrez, J; Nacey, C; Pepper, K; Kalomoiris, S; Anderson, J D; McGee, J L; Gruenloh, W; Fury, B; Bauer, G; Duffy, A; Tempkin, T; Wheelock, V; Nolta, J A Molecular therapy : the journal of the American Society of Gene Therapy. 26765769 2016 Jan 14;
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Peptide- and Amine-Modified Glucan Particles for the Delivery of Therapeutic siRNA. Cohen, Jessica L; Shen, Yuefei; Aouadi, Myriam; Vangala, Pranitha; Tencerova, Michaela; Amano, Shinya U; Nicoloro, Sarah M; Yawe, Joseph C; Czech, Michael P Molecular pharmaceutics. 26815386 2016 Mar 07;
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Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius. Rosenfeld, Jeffrey A; Reeves, Darryl; Brugler, Mercer R; Narechania, Apurva; Simon, Sabrina; Durrett, Russell; Foox, Jonathan; Shianna, Kevin; Schatz, Michael C; Gandara, Jorge; Afshinnekoo, Ebrahim; Lam, Ernest T; Hastie, Alex R; Chan, Saki; Cao, Han; Saghbini, Michael; Kentsis, Alex; Planet, Paul J; Kholodovych, Vladyslav; Tessler, Michael; Baker, Richard; DeSalle, Rob; Sorkin, Louis N; Kolokotronis, Sergios-Orestis; Siddall, Mark E; Amato, George; Mason, Christopher E Nature communications 26836631 2016 Feb 02
Stress-induced activation of brown adipose tissue prevents obesity in conditions of low adaptive thermogenesis. Razzoli, Maria; Frontini, Andrea; Gurney, Allison; Mondini, Eleonora; Cubuk, Cankut; Katz, Liora S; Cero, Cheryl; Bolan, Patrick J; Dopazo, Joaquin; Vidal-Puig, Antonio; Cinti, Saverio; Bartolomucci, Alessandro Molecular metabolism. 26844204 2016 Jan;
Extracellular matrix mediators of metastatic cell colonization characterized using scaffold mimics of the pre-metastatic niche. Aguado, Brian A; Caffe, Jordan R; Nanavati, Dhaval; Rao, Shreyas S; Bushnell, Grace G; Azarin, Samira M; Shea, Lonnie D Acta biomaterialia. 26844426 2016 Mar 15;
Allele-Specific Reduction of the Mutant Huntingtin Allele Using Transcription Activator-Like Effectors in Human Huntington's Disease Fibroblasts. Fink, Kyle D; Deng, Peter; Gutierrez, Josh; Anderson, Joseph S; Torrest, Audrey; Komarla, Anvita; Kalomoiris, Stefanos; Cary, Whitney; Anderson, Johnathon D; Gruenloh, William; Duffy, Alexandra; Tempkin, Teresa; Annett, Geralyn; Wheelock, Vicki; Segal, David J; Nolta, Jan A Cell transplantation. 26850319 2016;
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Plakophilin-2 loss promotes TGF-?1/p38 MAPK-dependent fibrotic gene expression in cardiomyocytes. Dubash, Adi D; Kam, Chen Y; Aguado, Brian A; Patel, Dipal M; Delmar, Mario; Shea, Lonnie D; Green, Kathleen J The Journal of cell biology. 26858265 2016 Feb 15;
Nanocaged enzymes with enhanced catalytic activity and increased stability against protease digestion. Zhao, Zhao; Fu, Jinglin; Dhakal, Soma; Johnson-Buck, Alexander; Liu, Minghui; Zhang, Ting; Woodbury, Neal W; Liu, Yan; Walter, Nils G; Yan, Hao Nature communications 26861509 2016 Feb 10
Clonal Immunoglobulin against Lysolipids in the Origin of Myeloma. Nair, Shiny; Branagan, Andrew R; Liu, Jun; Boddupalli, Chandra Sekhar; Mistry, Pramod K; Dhodapkar, Madhav V The New England journal of medicine. 26863356 2016 Feb 11;
A computational approach to studying ageing at the individual level. Harvanek, Zachary M; Mourão, Márcio A; Schnell, Santiago; Pletcher, Scott D Proceedings. Biological sciences / The Royal Society. 26865300 2016 Feb 10;
Spatially resolved proteomic mapping in living cells with the engineered peroxidase APEX2. Hung, Victoria; Udeshi, Namrata D; Lam, Stephanie S; Loh, Ken H; Cox, Kurt J; Pedram, Kayvon; Carr, Steven A; Ting, Alice Y Nature protocols 26866790 2016 Mar
Photoacoustic elastography. Hai, Pengfei; Yao, Junjie; Li, Guo; Li, Chiye; Wang, Lihong V Optics letters. 26872173 2016 Feb 15;
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Photoacoustic microscopy of arteriovenous shunts and blood diffusion in early-stage tumors. Yeh, Chenghung; Liang, Jinyang; Zhou, Yong; Hu, Song; Sohn, Rebecca E; Arbeit, Jeffrey M; Wang, Lihong V Journal of biomedical optics. 26882446 2016 Feb;
Near-infrared operating lamp for intraoperative molecular imaging of a mediastinal tumor. Keating, Jane; Judy, Ryan; Newton, Andrew; Singhal, Sunil BMC medical imaging 26883511 2016 Feb 17
Fibroblast Growth Factor 2 Regulates High Mobility Group A2 Expression in Human Bone Marrow-Derived Mesenchymal Stem Cells. Kalomoiris, Stefanos; Cicchetto, Andrew C; Lakatos, Kinga; Nolta, Jan A; Fierro, Fernando A Journal of cellular biochemistry. 26888666 2016 Sep;
Mapping of Variable DNA Methylation Across Multiple Cell Types Defines a Dynamic Regulatory Landscape of the Human Genome. Gu, Junchen; Stevens, Michael; Xing, Xiaoyun; Li, Daofeng; Zhang, Bo; Payton, Jacqueline E; Oltz, Eugene M; Jarvis, James N; Jiang, Kaiyu; Cicero, Theodore; Costello, Joseph F; Wang, Ting G3 (Bethesda) 26888867 2016
Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons. Krishnaswami, Suguna Rani; Grindberg, Rashel V; Novotny, Mark; Venepally, Pratap; Lacar, Benjamin; Bhutani, Kunal; Linker, Sara B; Pham, Son; Erwin, Jennifer A; Miller, Jeremy A; Hodge, Rebecca; McCarthy, James K; Kelder, Martin; McCorrison, Jamison; Aevermann, Brian D; Fuertes, Francisco Diez; Scheuermann, Richard H; Lee, Jun; Lein, Ed S; Schork, Nicholas; McConnell, Michael J; Gage, Fred H; Lasken, Roger S Nature protocols. 26890679 2016 Mar;
Regulatory consequences of neuronal ELAV-like protein binding to coding and non-coding RNAs in human brain. Scheckel, Claudia; Drapeau, Elodie; Frias, Maria A; Park, Christopher Y; Fak, John; Zucker-Scharff, Ilana; Kou, Yan; Haroutunian, Vahram; Ma'ayan, Avi; Buxbaum, Joseph D; Darnell, Robert B eLife 26894958 2016 Feb 19
Autoantibodies against homocysteinylated protein in a mouse model of folate deficiency-induced neural tube defects. Denny, Kerina J; Kelly, Christina F; Kumar, Vinod; Witham, Katey L; Cabrera, Robert M; Finnell, Richard H; Taylor, Stephen M; Jeanes, Angela; Woodruff, Trent M Birth defects research. Part A, Clinical and molecular teratology. 26900104 2016 Mar;
saRNA-guided Ago2 targets the RITA complex to promoters to stimulate transcription. Portnoy, Victoria; Lin, Szu Hua Sharon; Li, Kathy H; Burlingame, Alma; Hu, Zheng-Hui; Li, Hao; Li, Long-Cheng Cell research. 26902284 2016 Mar;
The effect of biomechanical variables on force sensitive resistor error: Implications for calibration and improved accuracy. Schofield, Jonathon S; Evans, Katherine R; Hebert, Jacqueline S; Marasco, Paul D; Carey, Jason P Journal of biomechanics. 26903413 2016 Mar 21;
The Development and Analysis of Integrated Neuroscience Data. Glaser, Joshua I; Kording, Konrad P Frontiers in computational neuroscience 26903852 2016
Analogous Convergence of Sustained and Transient Inputs in Parallel On and Off Pathways for Retinal Motion Computation. Greene, Matthew J; Kim, Jinseop S; Seung, H Sebastian; EyeWirers Cell reports. 26904938 2016 Mar 01;
Organoids as Models for Neoplastic Transformation. Neal, James T; Kuo, Calvin J Annual review of pathology. 26907527 2016 05 23;
Allosteric Inhibition of Bcr-Abl Kinase by High Affinity Monobody Inhibitors Directed to the Src Homology 2 (SH2)-Kinase Interface. Wojcik, John; Lamontanara, Allan Joaquim; Grabe, Grzegorz; Koide, Akiko; Akin, Louesa; Gerig, Barbara; Hantschel, Oliver; Koide, Shohei The Journal of biological chemistry. 26912659 2016 Apr 15;
High-Throughput Measurement of Binding Kinetics by mRNA Display and Next-Generation Sequencing. Jalali-Yazdi, Farzad; Lai, Lan Huong; Takahashi, Terry T; Roberts, Richard W Angewandte Chemie (International ed. in English). 26914638 2016 Mar 14;
Hypoxia as a therapy for mitochondrial disease. Jain, Isha H; Zazzeron, Luca; Goli, Rahul; Alexa, Kristen; Schatzman-Bone, Stephanie; Dhillon, Harveen; Goldberger, Olga; Peng, Jun; Shalem, Ophir; Sanjana, Neville E; Zhang, Feng; Goessling, Wolfram; Zapol, Warren M; Mootha, Vamsi K Science (New York, N.Y.). 26917594 2016 Apr 1;
Morphologic effects of estrogen stimulation on 3D MCF-7 microtissues. Vantangoli, Marguerite M; Wilson, Shelby; Madnick, Samantha J; Huse, Susan M; Boekelheide, Kim Toxicology letters. 26921789 2016 Apr 25;
The Human Toxome Collaboratorium: A Shared Environment for Multi-Omic Computational Collaboration within a Consortium. Fasani, Rick A; Livi, Carolina B; Choudhury, Dipanwita R; Kleensang, Andre; Bouhifd, Mounir; Pendse, Salil N; McMullen, Patrick D; Andersen, Melvin E; Hartung, Thomas; Rosenberg, Michael Frontiers in pharmacology. 26924983 2015;
Activating Peptides for Cellular Uptake via Polymerization into High Density Brushes. Blum, Angela P; Kammeyer, Jacquelin K; Gianneschi, Nathan C Chemical science (Royal Society of Chemistry : 2010). 26925209 2016 Feb 1;
Improving the accuracy of brain tumor surgery via Raman-based technology. Hollon, Todd; Lewis, Spencer; Freudiger, Christian W; Sunney Xie, X; Orringer, Daniel A Neurosurgical focus. 26926067 2016 Mar;
Functional and topological diversity of LOV domain photoreceptors. Glantz, Spencer T; Carpenter, Eric J; Melkonian, Michael; Gardner, Kevin H; Boyden, Edward S; Wong, Gane Ka-Shu; Chow, Brian Y Proceedings of the National Academy of Sciences of the United States of America 26929367 2016 Mar 15
Helicobacter pylori in children with asthmatic conditions at school age, and their mothers. den Hollander, W J; Sonnenschein-van der Voort, A M M; Holster, I L; de Jongste, J C; Jaddoe, V W; Hofman, A; Perez-Perez, G I; Moll, H A; Blaser, M J; Duijts, L; Kuipers, E J Alimentary pharmacology & therapeutics. 26932510 2016 Mar 1;
Assembly and operation of the autopatcher for automated intracellular neural recording in vivo. Kodandaramaiah, Suhasa B; Holst, Gregory L; Wickersham, Ian R; Singer, Annabelle C; Franzesi, Giovanni Talei; McKinnon, Michael L; Forest, Craig R; Boyden, Edward S Nature protocols 26938115 2016 Apr
Neurovascular and Immuno-Imaging: From Mechanisms to Therapies. Proceedings of the Inaugural Symposium. Akassoglou, Katerina; Agalliu, Dritan; Chang, Christopher J; Davalos, Dimitrios; Grutzendler, Jaime; Hillman, Elizabeth M C; Khakh, Baljit S; Kleinfeld, David; McGavern, Dorian B; Nelson, Sarah J; Zlokovic, Berislav V Frontiers in neuroscience. 26941593 2016;
Application of the TGx-28.65 transcriptomic biomarker to classify genotoxic and non-genotoxic chemicals in human TK6 cells in the presence of rat liver S9. Yauk, Carole L; Buick, Julie K; Williams, Andrew; Swartz, Carol D; Recio, Leslie; Li, Heng-Hong; Fornace Jr, Albert J; Thomson, Errol M; Aubrecht, Jiri Environmental and molecular mutagenesis. 26946220 2016 May;
A Broad RNA Virus Survey Reveals Both miRNA Dependence and Functional Sequestration. Scheel, Troels K H; Luna, Joseph M; Liniger, Matthias; Nishiuchi, Eiko; Rozen-Gagnon, Kathryn; Shlomai, Amir; Auray, Gaël; Gerber, Markus; Fak, John; Keller, Irene; Bruggmann, Rémy; Darnell, Robert B; Ruggli, Nicolas; Rice, Charles M Cell host & microbe. 26962949 2016 Mar 9;
Altering the Mitochondrial Fatty Acid Synthesis (mtFASII) Pathway Modulates Cellular Metabolic States and Bioactive Lipid Profiles as Revealed by Metabolomic Profiling. Clay, Hayley B; Parl, Angelika K; Mitchell, Sabrina L; Singh, Larry; Bell, Lauren N; Murdock, Deborah G PloS one. 26963735 2016;
Autism-associated SHANK3 haploinsufficiency causes Ih channelopathy in human neurons. Yi, Fei; Danko, Tamas; Botelho, Salome Calado; Patzke, Christopher; Pak, ChangHui; Wernig, Marius; Südhof, Thomas C Science (New York, N.Y.). 26966193 2016 May 6;
The microbiome and its potential as a cancer preventive intervention. Bultman, Scott J Seminars in oncology. 26970128 2016 Feb;
Hybrid Microscopy: Enabling Inexpensive High-Performance Imaging through Combined Physical and Optical Magnifications. Zhang, Yu Shrike; Chang, Jae-Byum; Alvarez, Mario Moisés; Trujillo-de Santiago, Grissel; Aleman, Julio; Batzaya, Byambaa; Krishnadoss, Vaishali; Ramanujam, Aishwarya Aravamudhan; Kazemzadeh-Narbat, Mehdi; Chen, Fei; Tillberg, Paul W; Dokmeci, Mehmet Remzi; Boyden, Edward S; Khademhosseini, Ali Scientific reports 26975883 2016 Mar 15
Focusing light through scattering media by full-polarization digital optical phase conjugation. Shen, Yuecheng; Liu, Yan; Ma, Cheng; Wang, Lihong V Optics letters 26977651 2016 Mar 15
A SIRT2-Selective Inhibitor Promotes c-Myc Oncoprotein Degradation and Exhibits Broad Anticancer Activity. Jing, Hui; Hu, Jing; He, Bin; Negrón Abril, Yashira L; Stupinski, Jack; Weiser, Keren; Carbonaro, Marisa; Chiang, Ying-Ling; Southard, Teresa; Giannakakou, Paraszkevi; Weiss, Robert S; Lin, Hening Cancer cell. 26977881 2016 Mar 14;
The Mitochondrial-Derived Peptide Humanin Protects RPE Cells From Oxidative Stress, Senescence, and Mitochondrial Dysfunction. Sreekumar, Parameswaran G; Ishikawa, Keijiro; Spee, Chris; Mehta, Hemal H; Wan, Junxiang; Yen, Kelvin; Cohen, Pinchas; Kannan, Ram; Hinton, David R Investigative ophthalmology & visual science. 26990160 2016 Mar;
Physostigmine and Methylphenidate Induce Distinct Arousal States During Isoflurane General Anesthesia in Rats. Kenny, Jonathan D; Chemali, Jessica J; Cotten, Joseph F; Van Dort, Christa J; Kim, Seong-Eun; Ba, Demba; Taylor, Norman E; Brown, Emery N; Solt, Ken Anesthesia and analgesia. 26991753 2016 Mar 17;
A Three-Enzyme Pathway with an Optimised Geometric Arrangement to Facilitate Substrate Transfer. Liu, Minghui; Fu, Jinglin; Qi, Xiaodong; Wootten, Shaun; Woodbury, Neal W; Liu, Yan; Yan, Hao Chembiochem : a European journal of chemical biology. 26995014 2016 06 16;
RNA Imaging with Dimeric Broccoli in Live Bacterial and Mammalian Cells. Filonov, Grigory S; Jaffrey, Samie R Current protocols in chemical biology. 26995352 2016 Mar 16;
A Neural Basis for Control of Cichlid Female Reproductive Behavior by Prostaglandin F2?. Juntti, Scott A; Hilliard, Austin T; Kent, Kai R; Kumar, Anusha; Nguyen, Andrew; Jimenez, Mariana A; Loveland, Jasmine L; Mourrain, Philippe; Fernald, Russell D Current biology : CB. 26996507 2016 Apr 4;
T cell-intrinsic ASC critically promotes T(H)17-mediated experimental autoimmune encephalomyelitis. Martin, Bradley N; Wang, Chenhui; Zhang, Cun-jin; Kang, Zizhen; Gulen, Muhammet Fatih; Zepp, Jarod A; Zhao, Junjie; Bian, Guanglin; Do, Jeong-su; Min, Booki; Pavicic Jr, Paul G; El-Sanadi, Caroline; Fox, Paul L; Akitsu, Aoi; Iwakura, Yoichiro; Sarkar, Ana Nature immunology. 26998763 2016 May;
UTX in muscle regeneration - the right dose and the right time. Liu, Ling; Rando, Thomas A The Journal of clinical investigation. 26999609 2016 Apr 1;
Modeling the integration of bacterial rRNA fragments into the human cancer genome. Sieber, Karsten B; Gajer, Pawel; Dunning Hotopp, Julie C BMC bioinformatics 27001685 2016 Mar 21
Conditional deletion of L1CAM in human neurons impairs both axonal and dendritic arborization and action potential generation. Patzke, Christopher; Acuna, Claudio; Giam, Louise R; Wernig, Marius; Südhof, Thomas C The Journal of experimental medicine. 27001749 2016 Apr 04;
Rapid and Long-Term Immunity Elicited by DNA-Encoded Antibody Prophylaxis and DNA Vaccination Against Chikungunya Virus. Muthumani, Karuppiah; Block, Peter; Flingai, Seleeke; Muruganantham, Nagarajan; Chaaithanya, Itta Krishna; Tingey, Colleen; Wise, Megan; Reuschel, Emma L; Chung, Christopher; Muthumani, Abirami; Sarangan, Gopalsamy; Srikanth, Padma; Khan, Amir S; Vijayachari, Paluru; Sardesai, Niranjan Y; Kim, J Joseph; Ugen, Kenneth E; Weiner, David B The Journal of infectious diseases. 27001960 2016 Aug 01;
Calories or protein? The effect of dietary restriction on lifespan in rodents is explained by calories alone. Speakman, J R; Mitchell, S E; Mazidi, M Experimental gerontology. 27006163 2016 12 15;
The Fuzzy Logic of Network Connectivity in Mouse Visual Thalamus. Morgan, Josh Lyskowski; Berger, Daniel Raimund; Wetzel, Arthur Willis; Lichtman, Jeff William Cell. 27015312 2016 Mar 24;
Quantitative super-resolution imaging with qPAINT. Jungmann, Ralf; Avendaño, Maier S; Dai, Mingjie; Woehrstein, Johannes B; Agasti, Sarit S; Feiger, Zachary; Rodal, Avital; Yin, Peng Nature methods. 27018580 2016 May;
Superior In vivo Transduction of Human Hepatocytes Using Engineered AAV3 Capsid. Vercauteren, Koen; Hoffman, Brad E; Zolotukhin, Irene; Keeler, Geoffrey D; Xiao, Jing W; Basner-Tschakarjan, Etiena; High, Katherine A; Ertl, Hildegund Cj; Rice, Charles M; Srivastava, Arun; de Jong, Ype P; Herzog, Roland W Molecular therapy : the journal of the American Society of Gene Therapy. 27019999 2016 06;
N-Acetylcysteine in the Treatment of Pediatric Tourette Syndrome: Randomized, Double-Blind, Placebo-Controlled Add-On Trial. Bloch, Michael H; Panza, Kaitlyn E; Yaffa, Alisa; Alvarenga, Pedro G; Jakubovski, Ewgeni; Mulqueen, Jilian M; Landeros-Weisenberger, Angeli; Leckman, James F Journal of child and adolescent psychopharmacology. 27027204 2016 05;
A primerless molecular diagnostic: phosphorothioated-terminal hairpin formation and self-priming extension (PS-THSP). Jung, Cheulhee; Ellington, Andrew D Analytical and bioanalytical chemistry. 27032410 2016 Dec;
Metabolomic network analysis of estrogen-stimulated MCF-7 cells: a comparison of overrepresentation analysis, quantitative enrichment analysis and pathway analysis versus metabolite network analysis. Maertens, Alexandra; Bouhifd, Mounir; Zhao, Liang; Odwin-DaCosta, Shelly; Kleensang, Andre; Yager, James D; Hartung, Thomas Archives of toxicology. 27039105 2016 Apr 2;
The Power of Engaging Citizen Scientists for Scientific Progress. Garbarino, Jeanne; Mason, Christopher E Journal of microbiology & biology education. 27047581 2016 Mar;
A neuronal circuit for colour vision based on rod-cone opponency. Joesch, Maximilian; Meister, Markus Nature. 27049951 2016 Apr 14;
PAPERCLIP Identifies MicroRNA Targets and a Role of CstF64/64tau in Promoting Non-canonical poly(A) Site Usage. Hwang, Hun-Way; Park, Christopher Y; Goodarzi, Hani; Fak, John J; Mele, Aldo; Moore, Michael J; Saito, Yuhki; Darnell, Robert B Cell reports 27050522 2016 Apr 12
Metabolomics-assisted proteomics identifies succinylation and SIRT5 as important regulators of cardiac function. Sadhukhan, Sushabhan; Liu, Xiaojing; Ryu, Dongryeol; Nelson, Ornella D; Stupinski, John A; Li, Zhi; Chen, Wei; Zhang, Sheng; Weiss, Robert S; Locasale, Jason W; Auwerx, Johan; Lin, Hening Proceedings of the National Academy of Sciences of the United States of America. 27051063 2016 Apr 19;
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Multiple Parallel Pathways of Translation Initiation on the CrPV IRES. Petrov, Alexey; Grosely, Rosslyn; Chen, Jin; O'Leary, Seán E; Puglisi, Joseph D Molecular cell. 27058789 2016 Apr 7;
Lipoxin A4 inhibits microglial activation and reduces neuroinflammation and neuropathic pain after spinal cord hemisection. Martini, Alessandra Cadete; Berta, Temugin; Forner, Stefânia; Chen, Gang; Bento, Allisson Freire; Ji, Ru-Rong; Rae, Giles Alexander Journal of neuroinflammation. 27059991 2016 Apr 08;
A Glial K/Cl Transporter Controls Neuronal Receptive Ending Shape by Chloride Inhibition of an rGC. Singhvi, Aakanksha; Liu, Bingqian; Friedman, Christine J; Fong, Jennifer; Lu, Yun; Huang, Xin-Yun; Shaham, Shai Cell. 27062922 2016 May 05;
Chemical and biological production of cyclotides. Li, Yilong; Bi, Tao; Camarero, Julio A Advances in botanical research. 27064329 2015;
New Techniques for the Study of Neural Tube Defects. Lei, Yunping; Finnell, Richard H Advanced techniques in biology & medicine. 27066597 2016 Feb;
PROS-1/Prospero Is a Major Regulator of the Glia-Specific Secretome Controlling Sensory-Neuron Shape and Function in C. elegans. Wallace, Sean W; Singhvi, Aakanksha; Liang, Yupu; Lu, Yun; Shaham, Shai Cell reports. 27068465 2016 Apr 19;
Interpreting Prevotella and Bacteroides as biomarkers of diet and lifestyle. Gorvitovskaia, Anastassia; Holmes, Susan P; Huse, Susan M Microbiome 27068581 2016 Apr 12
Naturally occurring mitochondrial-derived peptides are age-dependent regulators of apoptosis, insulin sensitivity, and inflammatory markers. Cobb, Laura J; Lee, Changhan; Xiao, Jialin; Yen, Kelvin; Wong, Richard G; Nakamura, Hiromi K; Mehta, Hemal H; Gao, Qinglei; Ashur, Carmel; Huffman, Derek M; Wan, Junxiang; Muzumdar, Radhika; Barzilai, Nir; Cohen, Pinchas Aging. 27070352 2016 04;
Mutant DNA quantification by digital PCR can be confounded by heating during DNA fragmentation. Kang, Qing; Parkin, Brian; Giraldez, Maria D; Tewari, Muneesh BioTechniques. 27071606 2016 Apr;
Nutrition and energetics in rodent longevity research. Gibbs, Victoria K; Smith Jr, Daniel L Experimental gerontology. 27073168 2016 Apr 9;
Minireview: Genome Editing of Human Pluripotent Stem Cells for Modeling Metabolic Disease. Yu, Haojie; Cowan, Chad A Molecular endocrinology (Baltimore, Md.). 27075706 2016 Jun;
Stanford's Outcomes Research in Kids (STORK): a prospective study of healthy pregnant women and their babies in Northern California. Ley, Catherine; Sanchez, Maria de la Luz; Mathur, Ankur; Yang, Shufang; Sundaram, Vandana; Parsonnet, Julie BMJ open. 27075843 2016 Apr 13;
A distant trophoblast-specific enhancer controls HLA-G expression at the maternal-fetal interface. Ferreira, Leonardo M R; Meissner, Torsten B; Mikkelsen, Tarjei S; Mallard, William; O'Donnell, Charles W; Tilburgs, Tamara; Gomes, Hannah A B; Camahort, Raymond; Sherwood, Richard I; Gifford, David K; Rinn, John L; Cowan, Chad A; Strominger, Jack L Proceedings of the National Academy of Sciences of the United States of America. 27078102 2016 May 10;
''Next-generation'' mesenchymal stem or stromal cells for the in vivo delivery of bioactive factors: progressing toward the clinic. Nolta, Jan A Transfusion. 27079315 2016 Apr;
Helminth infection promotes colonization resistance via type 2 immunity. Ramanan, Deepshika; Bowcutt, Rowann; Lee, Soo Ching; Tang, Mei San; Kurtz, Zachary D; Ding, Yi; Honda, Kenya; Gause, William C; Blaser, Martin J; Bonneau, Richard A; Lim, Yvonne A L; Loke, P'ng; Cadwell, Ken Science (New York, N.Y.) 27080105 2016 Apr 29
Humanin: Functional Interfaces with IGF-I. Xiao, J; Kim, S-J; Cohen, P; Yen, K Growth hormone & IGF research : official journal of the Growth Hormone Research Society and the International IGF Research Society. 27082450 2016 08;
Tutorial on photoacoustic tomography. Zhou, Yong; Yao, Junjie; Wang, Lihong V Journal of biomedical optics. 27086868 2016 Jun;
The oncogenic transcription factor c-Jun regulates glutaminase expression and sensitizes cells to glutaminase-targeted therapy. Lukey, Michael J; Greene, Kai Su; Erickson, Jon W; Wilson, Kristin F; Cerione, Richard A Nature communications. 27089238 2016;
Human induced pluripotent stem cell-derived cardiomyocytes recapitulate the predilection of breast cancer patients to doxorubicin-induced cardiotoxicity. Burridge, Paul W; Li, Yong Fuga; Matsa, Elena; Wu, Haodi; Ong, Sang-Ging; Sharma, Arun; Holmström, Alexandra; Chang, Alex C; Coronado, Michael J; Ebert, Antje D; Knowles, Joshua W; Telli, Melinda L; Witteles, Ronald M; Blau, Helen M; Bernstein, Daniel; Al Nature medicine. 27089514 2016 May;
Nuclear RNA-seq of single neurons reveals molecular signatures of activation. Lacar, Benjamin; Linker, Sara B; Jaeger, Baptiste N; Krishnaswami, Suguna; Barron, Jerika; Kelder, Martijn; Parylak, Sarah; Paquola, Apuã; Venepally, Pratap; Novotny, Mark; O'Connor, Carolyn; Fitzpatrick, Conor; Erwin, Jennifer; Hsu, Jonathan Y; Husband, David; McConnell, Michael J; Lasken, Roger; Gage, Fred H Nature communications. 27090946 2016 Apr 19;
Generating High-Accuracy Peptide-Binding Data in High Throughput with Yeast Surface Display and SORTCERY. Reich, Lothar Luther; Dutta, Sanjib; Keating, Amy E Methods in molecular biology (Clifton, N.J.). 27094295 2016;
Towards a comprehensive atlas of cortical connections in a primate brain: Mapping tracer injection studies of the common marmoset into a reference digital template. Majka, Piotr; Chaplin, Tristan A; Yu, Hsin-Hao; Tolpygo, Alexander; Mitra, Partha P; Wójcik, Daniel K; Rosa, Marcello G P The Journal of comparative neurology. 27099164 2016 08 01;
The Intestinal Microbiome and Estrogen Receptor-Positive Female Breast Cancer. Kwa, Maryann; Plottel, Claudia S; Blaser, Martin J; Adams, Sylvia Journal of the National Cancer Institute. 27107051 2016 08;
Crystal Structure of Cpf1 in Complex with Guide RNA and Target DNA. Yamano, Takashi; Nishimasu, Hiroshi; Zetsche, Bernd; Hirano, Hisato; Slaymaker, Ian M; Li, Yinqing; Fedorova, Iana; Nakane, Takanori; Makarova, Kira S; Koonin, Eugene V; Ishitani, Ryuichiro; Zhang, Feng; Nureki, Osamu Cell 27114038 2016 May 05
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Complementation of mitochondrial electron transport chain by manipulation of the NAD+/NADH ratio. Titov, Denis V; Cracan, Valentin; Goodman, Russell P; Peng, Jun; Grabarek, Zenon; Mootha, Vamsi K Science (New York, N.Y.). 27124460 2016 Apr 8;
Antibiotic perturbation of the murine gut microbiome enhances the adiposity, insulin resistance, and liver disease associated with high-fat diet. Mahana, Douglas; Trent, Chad M; Kurtz, Zachary D; Bokulich, Nicholas A; Battaglia, Thomas; Chung, Jennifer; Müller, Christian L; Li, Huilin; Bonneau, Richard A; Blaser, Martin J Genome medicine. 27124954 2016;
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Electron microscopy using the genetically encoded APEX2 tag in cultured mammalian cells. Martell, Jeffrey D; Deerinck, Thomas J; Lam, Stephanie S; Ellisman, Mark H; Ting, Alice Y Nature protocols. 28796234 2017 Sep;
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Constitutive Signaling from an Engineered IL7 Receptor Promotes Durable Tumor Elimination by Tumor-Redirected T Cells. Shum, Thomas; Omer, Bilal; Tashiro, Haruko; Kruse, Robert L; Wagner, Dimitrios L; Parikh, Kathan; Yi, Zhongzhen; Sauer, Tim; Liu, Daofeng; Parihar, Robin; Castillo, Paul; Liu, Hao; Brenner, Malcolm K; Metelitsa, Leonid S; Gottschalk, Stephen; Rooney, Cliona M Cancer discovery. 28830878 2017 11;
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Oxalobacter formigenes-associated host features and microbial community structures examined using the American Gut Project. Liu, Menghan; Koh, Hyunwook; Kurtz, Zachary D; Battaglia, Thomas; PeBenito, Amanda; Li, Huilin; Nazzal, Lama; Blaser, Martin J Microbiome. 28841836 2017 Aug 25;
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Massively parallel single-nucleus RNA-seq with DroNc-seq. Habib, Naomi; Avraham-Davidi, Inbal; Basu, Anindita; Burks, Tyler; Shekhar, Karthik; Hofree, Matan; Choudhury, Sourav R; Aguet, François; Gelfand, Ellen; Ardlie, Kristin; Weitz, David A; Rozenblatt-Rosen, Orit; Zhang, Feng; Regev, Aviv Nature methods. 28846088 2017 Oct;
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A multi-trap microfluidic chip enabling longitudinal studies of nerve regeneration in Caenorhabditis elegans. Gokce, Sertan Kutal; Hegarty, Evan Marley; Mondal, Sudip; Zhao, Peisen; Ghorashian, Navid; Hilliard, Massimo A; Ben-Yakar, Adela Scientific reports. 28852096 2017 08 29;
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Closed-Loop Real-Time Imaging Enables Fully Automated Cell-Targeted Patch-Clamp Neural Recording In Vivo. Suk, Ho-Jun; van Welie, Ingrid; Kodandaramaiah, Suhasa B; Allen, Brian; Forest, Craig R; Boyden, Edward S Neuron. 28858614 2017 Aug 30;
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A single early-in-life macrolide course has lasting effects on murine microbial network topology and immunity. Ruiz, Victoria E; Battaglia, Thomas; Kurtz, Zachary D; Bijnens, Luc; Ou, Amy; Engstrand, Isak; Zheng, Xuhui; Iizumi, Tadasu; Mullins, Briana J; Müller, Christian L; Cadwell, Ken; Bonneau, Richard; Perez-Perez, Guillermo I; Blaser, Martin J Nature communications. 28894149 2017 09 11;
Rabies screen reveals GPe control of cocaine-triggered plasticity. Beier, Kevin T; Kim, Christina K; Hoerbelt, Paul; Hung, Lin Wai; Heifets, Boris D; DeLoach, Katherine E; Mosca, Timothy J; Neuner, Sophie; Deisseroth, Karl; Luo, Liqun; Malenka, Robert C Nature. 28902833 2017 09 21;
cTag-PAPERCLIP Reveals Alternative Polyadenylation Promotes Cell-Type Specific Protein Diversity and Shifts Araf Isoforms with Microglia Activation. Hwang, Hun-Way; Saito, Yuhki; Park, Christopher Y; Blachère, Nathalie E; Tajima, Yoko; Fak, John J; Zucker-Scharff, Ilana; Darnell, Robert B Neuron. 28910620 2017 Sep 13;
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In Situ Super-Resolution Imaging of Genomic DNA with OligoSTORM and OligoDNA-PAINT. Beliveau, Brian J; Boettiger, Alistair N; Nir, Guy; Bintu, Bogdan; Yin, Peng; Zhuang, Xiaowei; Wu, C-Ting Methods in molecular biology (Clifton, N.J.). 28924672 ;
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Substituting Sodium Hydrosulfite with Sodium Metabisulfite Improves Long-Term Stability of a Distributable Paper-Based Test Kit for Point-of-Care Screening for Sickle Cell Anemia. Torabian, Kian; Lezzar, Dalia; Piety, Nathaniel Z; George, Alex; Shevkoplyas, Sergey S Biosensors. 28930183 2017 Sep 20;
The TREM2-APOE Pathway Drives the Transcriptional Phenotype of Dysfunctional Microglia in Neurodegenerative Diseases. Krasemann, Susanne; Madore, Charlotte; Cialic, Ron; Baufeld, Caroline; Calcagno, Narghes; El Fatimy, Rachid; Beckers, Lien; O'Loughlin, Elaine; Xu, Yang; Fanek, Zain; Greco, David J; Smith, Scott T; Tweet, George; Humulock, Zachary; Zrzavy, Tobias; Conde-Sanroman, Patricia; Gacias, Mar; Weng, Zhiping; Chen, Hao; Tjon, Emily; Mazaheri, Fargol; Hartmann, Kristin; Madi, Asaf; Ulrich, Jason D; Glatzel, Markus; Worthmann, Anna; Heeren, Joerg; Budnik, Bogdan; Lemere, Cynthia; Ikezu, Tsuneya; Heppner, Frank L; Litvak, Vladimir; Holtzman, David M; Lassmann, Hans; Weiner, Howard L; Ochando, Jordi; Haass, Christian; Butovsky, Oleg Immunity. 28930663 2017 Sep 19;
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Multiplexed Exchange-PAINT imaging reveals ligand-dependent EGFR and Met interactions in the plasma membrane. Werbin, Jeffrey L; Avendaño, Maier S; Becker, Verena; Jungmann, Ralf; Yin, Peng; Danuser, Gaudenz; Sorger, Peter K Scientific reports. 28939861 2017 Sep 22;
Clinically resolved psoriatic lesions contain psoriasis-specific IL-17-producing ?? T cell clones. Matos, Tiago R; O'Malley, John T; Lowry, Elizabeth L; Hamm, David; Kirsch, Ilan R; Robins, Harlan S; Kupper, Thomas S; Krueger, James G; Clark, Rachael A The Journal of clinical investigation. 28945199 2017 Nov 01;
Imaging RNA polymerase III transcription using a photostable RNA-fluorophore complex. Song, Wenjiao; Filonov, Grigory S; Kim, Hyaeyeong; Hirsch, Markus; Li, Xing; Moon, Jared D; Jaffrey, Samie R Nature chemical biology. 28945233 2017 Nov;
A DNA nanoscope via auto-cycling proximity recording. Schaus, Thomas E; Woo, Sungwook; Xuan, Feng; Chen, Xi; Yin, Peng Nature communications. 28947733 2017 Sep 25;
Rapid intraoperative histology of unprocessed surgical specimens via fibre-laser-based stimulated Raman scattering microscopy. Orringer, Daniel A; Pandian, Balaji; Niknafs, Yashar S; Hollon, Todd C; Boyle, Julianne; Lewis, Spencer; Garrard, Mia; Hervey-Jumper, Shawn L; Garton, Hugh J L; Maher, Cormac O; Heth, Jason A; Sagher, Oren; Wilkinson, D Andrew; Snuderl, Matija; Venneti, Sriram; Ramkissoon, Shakti H; McFadden, Kathryn A; Fisher-Hubbard, Amanda; Lieberman, Andrew P; Johnson, Timothy D; Xie, X Sunney; Trautman, Jay K; Freudiger, Christian W; Camelo-Piragua, Sandra Nature biomedical engineering. 28955599 2017;
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Ultrafast Synthesis of Multifunctional Submicrometer Hollow Silica Spheres in Microfluidic Spiral Channels. Nie, Yuan; Hao, Nanjing; Zhang, John X J Scientific reports. 28974729 2017 Oct 03;
Safety and Immunogenicity of an Anti-Zika Virus DNA Vaccine - Preliminary Report. Tebas, Pablo; Roberts, Christine C; Muthumani, Kar; Reuschel, Emma L; Kudchodkar, Sagar B; Zaidi, Faraz I; White, Scott; Khan, Amir S; Racine, Trina; Choi, Hyeree; Boyer, Jean; Park, Young K; Trottier, Sylvie; Remigio, Celine; Krieger, Diane; Spruill, Susan E; Bagarazzi, Mark; Kobinger, Gary P; Weiner, David B; Maslow, Joel N The New England journal of medicine. 28976850 2017 Oct 04;
RNA targeting with CRISPR-Cas13. Abudayyeh, Omar O; Gootenberg, Jonathan S; Essletzbichler, Patrick; Han, Shuo; Joung, Julia; Belanto, Joseph J; Verdine, Vanessa; Cox, David B T; Kellner, Max J; Regev, Aviv; Lander, Eric S; Voytas, Daniel F; Ting, Alice Y; Zhang, Feng Nature. 28976959 2017 Oct 12;
Slowing Down Aging. Meyer, Katharina; Yankner, Bruce A Cell metabolism. 28978424 2017 Oct 03;
Towards Organs on Demand: Breakthroughs and Challenges in Models of Organogenesis. Francipane, Maria Giovanna; Lagasse, Eric Current pathobiology reports. 28979828 2016 Sep;
Cryo-EM Structures Reveal Mechanism and Inhibition of DNA Targeting by a CRISPR-Cas Surveillance Complex. Guo, Tai Wei; Bartesaghi, Alberto; Yang, Hui; Falconieri, Veronica; Rao, Prashant; Merk, Alan; Eng, Edward T; Raczkowski, Ashleigh M; Fox, Tara; Earl, Lesley A; Patel, Dinshaw J; Subramaniam, Sriram Cell. 28985564 2017 Oct 05;
Engineering the pre-metastatic niche. Aguado, Brian A; Bushnell, Grace G; Rao, Shreyas S; Jeruss, Jacqueline S; Shea, Lonnie D Nature biomedical engineering. 28989814 2017;
Subcellular Fractionation for ERK Activation Upon Mitochondrial-derived Peptide Treatment. Kim, Su-Jeong; Xiao, Jialin; Cohen, Pinchas; Yen, Kelvin Journal of visualized experiments : JoVE. 28994791 2017 09 25;
Near-Infrared Fluorescent Proteins Engineered from Bacterial Phytochromes in Neuroimaging. Piatkevich, Kiryl D; Suk, Ho-Jun; Kodandaramaiah, Suhasa B; Yoshida, Fumiaki; DeGennaro, Ellen M; Drobizhev, Mikhail; Hughes, Thomas E; Desimone, Robert; Boyden, Edward S; Verkhusha, Vladislav V Biophysical journal. 29017728 2017 Nov 21;
Variant surface glycoprotein density defines an immune evasion threshold for African trypanosomes undergoing antigenic variation. Pinger, Jason; Chowdhury, Shanin; Papavasiliou, F Nina Nature communications. 29018220 2017 10 10;
Household triclosan and triclocarban effects on the infant and maternal microbiome. Ribado, Jessica V; Ley, Catherine; Haggerty, Thomas D; Tkachenko, Ekaterina; Bhatt, Ami S; Parsonnet, Julie EMBO molecular medicine. 29030459 2017 12;
Antibodies to biotin enable large-scale detection of biotinylation sites on proteins. Udeshi, Namrata D; Pedram, Kayvon; Svinkina, Tanya; Fereshetian, Shaunt; Myers, Samuel A; Aygun, Ozan; Krug, Karsten; Clauser, Karl; Ryan, Dominic; Ast, Tslil; Mootha, Vamsi K; Ting, Alice Y; Carr, Steven A Nature methods. 29039416 2017 Dec;
Embryonic stem cell secreted factors decrease invasiveness of triple-negative breast cancer cells through regulome modulation. Tarasewicz, Elizabeth; Oakes, Robert S; Aviles, Misael O; Straehla, Joelle; Chilton, Kathryn M; Decker, Joseph T; Wu, Jia; Shea, Lonnie D; Jeruss, Jacqueline S Cancer biology & therapy. 29053396 2018 04 03;
Humanity in a Dish: Population Genetics with iPSCs. Warren, Curtis R; Cowan, Chad A Trends in cell biology. 29054332 2018 01;
Designing Acellular Injectable Biomaterial Therapeutics for Treating Myocardial Infarction and Peripheral Artery Disease. Hernandez, Melissa J; Christman, Karen L JACC. Basic to translational science. 29057375 2017 Apr;
Random Spherically Constrained Single-Particle (RSC) Method to Study Voltage-Gated Ion Channels. Wang, Liguo Methods in molecular biology (Clifton, N.J.) 29058198 2018
Endothelial jagged-2 sustains hematopoietic stem and progenitor reconstitution after myelosuppression. Guo, Peipei; Poulos, Michael G; Palikuqi, Brisa; Badwe, Chaitanya R; Lis, Raphael; Kunar, Balvir; Ding, Bi-Sen; Rabbany, Sina Y; Shido, Koji; Butler, Jason M; Rafii, Shahin The Journal of clinical investigation. 29058691 2017 Dec 01;
MotifMark: Finding regulatory motifs in DNA sequences. Hassanzadeh, Hamid Reza; Kolhe, Pushkar; Isbell, Charles L; Wang, May D Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. 29060747 2017 07;
Design, implementation, and evaluation of a physiological closed-loop control device for medically-induced coma. Jingzhi An; Purdon, Patrick L; Solt, Ken; Sims, Nathaniel M; Brown, Emery N; Westover, M Brandon Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. 29060851 2017 07;
Expansion Mini-Microscopy: An Enabling Alternative in Point-of-Care Diagnostics. Zhang, Yu Shrike; Santiago, Grissel Trujillo-de; Alvarez, Mario Moisés; Schiff, Steven J; Boyden, Edward S; Khademhosseini, Ali Current opinion in biomedical engineering. 29062977 2017 Mar;
Selective Proteomic Analysis of Antibiotic-Tolerant Cellular Subpopulations in Pseudomonas aeruginosa Biofilms. Babin, Brett M; Atangcho, Lydia; van Eldijk, Mark B; Sweredoski, Michael J; Moradian, Annie; Hess, Sonja; Tolker-Nielsen, Tim; Newman, Dianne K; Tirrell, David A mBio. 29066549 2017 Oct 24;
Towards bedside washing of stored red blood cells: a prototype of a simple apparatus based on microscale sedimentation in normal gravity. Khanal, G; Huynh, R A; Torabian, K; Xia, H; Vörös, E; Shevkoplyas, S S Vox sanguinis. 29067695 2017 Oct 25;
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Inhibition of DAI-dependent necroptosis by the Z-DNA binding domain of the vaccinia virus innate immune evasion protein, E3. Koehler, Heather; Cotsmire, Samantha; Langland, Jeffrey; Kibler, Karen V; Kalman, Daniel; Upton, Jason W; Mocarski, Edward S; Jacobs, Bertram L Proceedings of the National Academy of Sciences of the United States of America. 29073079 2017 Oct 24;
Age and the association of dementia-related pathology with trajectories of cognitive decline. Jansen, Willemijn J; Wilson, Robert S; Visser, Pieter Jelle; Nag, Sukriti; Schneider, Julie A; James, Bryan D; Leurgans, Sue E; Capuano, Ana W; Bennett, David A; Boyle, Patricia A Neurobiology of aging. 29078129 2018 01;
Site-directed RNA repair of endogenous Mecp2 RNA in neurons. Sinnamon, John R; Kim, Susan Y; Corson, Glen M; Song, Zhen; Nakai, Hiroyuki; Adelman, John P; Mandel, Gail Proceedings of the National Academy of Sciences of the United States of America. 29078406 2017 Oct 31;
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High-Affinity Nucleic-Acid-Based Receptors for Steroids. Yang, Kyung-Ae; Chun, Hyosun; Zhang, Yameng; Pecic, Stevan; Nakatsuka, Nako; Andrews, Anne M; Worgall, Tilla S; Stojanovic, Milan N ACS chemical biology. 29083858 2017 12 15;
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Risk of Clostridium difficile Infection in Patients With Celiac Disease: A Population-Based Study. Lebwohl, Benjamin; Nobel, Yael R; Green, Peter H R; Blaser, Martin J; Ludvigsson, Jonas F The American journal of gastroenterology. 29087398 2017 Dec;
Single-Cell RNA-Seq Analysis of Infiltrating Neoplastic Cells at the Migrating Front of Human Glioblastoma. Darmanis, Spyros; Sloan, Steven A; Croote, Derek; Mignardi, Marco; Chernikova, Sophia; Samghababi, Peyman; Zhang, Ye; Neff, Norma; Kowarsky, Mark; Caneda, Christine; Li, Gordon; Chang, Steven D; Connolly, Ian David; Li, Yingmei; Barres, Ben A; Gephart, Me Cell reports. 29091775 2017 10 31;
Nonsteroidal Anti-Inflammatory Drug-Induced Leaky Gut Modeled Using Polarized Monolayers of Primary Human Intestinal Epithelial Cells. Bhatt, Aadra P; Gunasekara, Dulan B; Speer, Jennifer; Reed, Mark I; Peña, Alexis N; Midkiff, Bentley R; Magness, Scott T; Bultman, Scott J; Allbritton, Nancy L; Redinbo, Matthew R ACS infectious diseases. 29094594 2017 Nov 10;
Enzyme-Targeted Nanoparticles for Delivery to Ischemic Skeletal Muscle. Ungerleider, J L; Kammeyer, J K; Braden, R L; Christman, K L; Gianneschi, N C Polymer chemistry. 29098018 2017 Sep 14;
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Circulating microRNAs and treatment response in the Phase II SWOG S0925 study for patients with new metastatic hormone-sensitive prostate cancer. Cheng, Heather H; Plets, Melissa; Li, Hongli; Higano, Celestia S; Tangen, Catherine M; Agarwal, Neeraj; Vogelzang, Nicholas J; Hussain, Maha; Thompson Jr, Ian M; Tewari, Muneesh; Yu, Evan Y The Prostate. 29105802 2018 Feb;
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Evidence for Long-Timescale Patterns of Synaptic Inputs in CA1 of Awake Behaving Mice. Kolb, Ilya; Talei Franzesi, Giovanni; Wang, Michael; Kodandaramaiah, Suhasa B; Forest, Craig R; Boyden, Edward S; Singer, Annabelle C The Journal of neuroscience : the official journal of the Society for Neuroscience. 29279309 2018 Feb 14;
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Development and Evaluation of mini-EXPLORER: A Long Axial Field-of-View PET Scanner for Nonhuman Primate Imaging. Berg, Eric; Zhang, Xuezhu; Bec, Julien; Judenhofer, Martin S; Patel, Brijesh; Peng, Qiyu; Kapusta, Maciej; Schmand, Matthias; Casey, Michael E; Tarantal, Alice F; Qi, Jinyi; Badawi, Ramsey D; Cherry, Simon R Journal of nuclear medicine : official publication, Society of Nuclear Medicine. 29419483 2018 Jun;
High-Content Microfluidic Screening Platform Used To Identify ?2R/Tmem97 Binding Ligands that Reduce Age-Dependent Neurodegeneration in C. elegans SC_APP Model. Mondal, Sudip; Hegarty, Evan; Sahn, James J; Scott, Luisa L; Gökçe, Sertan Kutal; Martin, Chris; Ghorashian, Navid; Satarasinghe, Praveen Navoda; Iyer, Sangeetha; Sae-Lee, Wisath; Hodges, Timothy R; Pierce, Jonathan T; Martin, Stephen F; Ben-Yakar, Adela ACS chemical neuroscience. 29426225 2018 05 16;
Using Behavioral Analytics to Increase Exercise: A Randomized N-of-1 Study. Yoon, Sunmoo; Schwartz, Joseph E; Burg, Matthew M; Kronish, Ian M; Alcantara, Carmela; Julian, Jacob; Parsons, Faith; Davidson, Karina W; Diaz, Keith M American journal of preventive medicine. 29429607 2018 Apr;
The TIA1 RNA-Binding Protein Family Regulates EIF2AK2-Mediated Stress Response and Cell Cycle Progression. Meyer, Cindy; Garzia, Aitor; Mazzola, Michael; Gerstberger, Stefanie; Molina, Henrik; Tuschl, Thomas Molecular cell. 29429924 2018 Feb 15;
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A DNA nanorobot functions as a cancer therapeutic in response to a molecular trigger in vivo. Li, Suping; Jiang, Qiao; Liu, Shaoli; Zhang, Yinlong; Tian, Yanhua; Song, Chen; Wang, Jing; Zou, Yiguo; Anderson, Gregory J; Han, Jing-Yan; Chang, Yung; Liu, Yan; Zhang, Chen; Chen, Liang; Zhou, Guangbiao; Nie, Guangjun; Yan, Hao; Ding, Baoquan; Zhao, Yuliang Nature biotechnology 29431737 2018 03
Closed-loop feedback control for microfluidic systems through automated capacitive fluid height sensing. Soenksen, L R; Kassis, T; Noh, M; Griffith, L G; Trumper, D L Lab on a chip 29437172 2018 03 13
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OligoMiner provides a rapid, flexible environment for the design of genome-scale oligonucleotide in situ hybridization probes. Beliveau, Brian J; Kishi, Jocelyn Y; Nir, Guy; Sasaki, Hiroshi M; Saka, Sinem K; Nguyen, Son C; Wu, Chao-Ting; Yin, Peng Proceedings of the National Academy of Sciences of the United States of America. 29463736 2018 Mar 06;
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Differential Regulation of Bladder Pain and Voiding Function by Sensory Afferent Populations Revealed by Selective Optogenetic Activation. DeBerry, Jennifer J; Samineni, Vijay K; Copits, Bryan A; Sullivan, Christopher J; Vogt, Sherri K; Albers, Kathryn M; Davis, Brian M; Gereau Iv, Robert W Frontiers in integrative neuroscience. 29483864 2018;
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A fusion-protein approach enabling mammalian cell production of tumor targeting protein domains for therapeutic development. Hu, Jia; Chen, Xiang; Zhang, Xuhua; Yuan, Xiaopeng; Yang, Mingjuan; Dai, Hui; Yang, Wei; Zhou, Qinghua; Wen, Weihong; Wang, Qirui; Qin, Weijun; Zhao, Aizhi Protein science : a publication of the Protein Society. 29500915 2018 05;
Mapping a functional cancer genome atlas of tumor suppressors in mouse liver using AAV-CRISPR-mediated direct in vivo screening. Wang, Guangchuan; Chow, Ryan D; Ye, Lupeng; Guzman, Christopher D; Dai, Xiaoyun; Dong, Matthew B; Zhang, Feng; Sharp, Phillip A; Platt, Randall J; Chen, Sidi Science advances. 29503867 2018 02;
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Quorum-sensing regulator RhlR but not its autoinducer RhlI enables Pseudomonas to evade opsonization. Haller, Samantha; Franchet, Adrien; Hakkim, Abdul; Chen, Jing; Drenkard, Eliana; Yu, Shen; Schirmeier, Stefanie; Li, Zi; Martins, Nelson; Ausubel, Frederick M; Liégeois, Samuel; Ferrandon, Dominique EMBO reports. 29523648 2018 05;
Illusory movement perception improves motor control for prosthetic hands. Marasco, Paul D; Hebert, Jacqueline S; Sensinger, Jon W; Shell, Courtney E; Schofield, Jonathon S; Thumser, Zachary C; Nataraj, Raviraj; Beckler, Dylan T; Dawson, Michael R; Blustein, Dan H; Gill, Satinder; Mensh, Brett D; Granja-Vazquez, Rafael; Newcomb, Science translational medicine. 29540617 2018 Mar 14;
Development of the Human Mycobiome over the First Month of Life and across Body Sites. Ward, Tonya L; Dominguez-Bello, Maria Gloria; Heisel, Tim; Al-Ghalith, Gabriel; Knights, Dan; Gale, Cheryl A mSystems. 29546248 2018 May-Jun;
High-throughput ultraviolet photoacoustic microscopy with multifocal excitation. Imai, Toru; Shi, Junhui; Wong, Terence T W; Li, Lei; Zhu, Liren; Wang, Lihong V Journal of biomedical optics. 29546734 2018 Mar;
Tumor characterization by ultrasound-release of multiple protein and microRNA biomarkers, preclinical and clinical evidence. D'Souza, Aloma L; Chevillet, John R; Ghanouni, Pejman; Yan, Xinrui; Tewari, Muneesh; Gambhir, Sanjiv S PloS one. 29547636 2018;
Predator-secreted sulfolipids induce defensive responses in C. elegans. Liu, Zheng; Kariya, Maro J; Chute, Christopher D; Pribadi, Amy K; Leinwand, Sarah G; Tong, Ada; Curran, Kevin P; Bose, Neelanjan; Schroeder, Frank C; Srinivasan, Jagan; Chalasani, Sreekanth H Nature communications. 29555902 2018 Mar 19;
Multiplexed imaging of high-density libraries of RNAs with MERFISH and expansion microscopy. Wang, Guiping; Moffitt, Jeffrey R; Zhuang, Xiaowei Scientific reports. 29555914 2018 Mar 19;
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A highly adaptive microbiome-based association test for survival traits. Koh, Hyunwook; Livanos, Alexandra E; Blaser, Martin J; Li, Huilin BMC genomics. 29558893 2018 03 20;
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Are Nomothetic or Ideographic Approaches Superior in Predicting Daily Exercise Behaviors? Cheung, Ying Kuen; Hsueh, Pei-Yun Sabrina; Qian, Min; Yoon, Sunmoo; Meli, Laura; Diaz, Keith M; Schwartz, Joseph E; Kronish, Ian M; Davidson, Karina W Methods of information in medicine. 29582914 2017;
The logic of single-cell projections from visual cortex. Han, Yunyun; Kebschull, Justus M; Campbell, Robert A A; Cowan, Devon; Imhof, Fabia; Zador, Anthony M; Mrsic-Flogel, Thomas D Nature. 29590093 2018 04 05;
Personalized (N-of-1) Trials for Depression: A Systematic Review. Kronish, Ian M; Hampsey, Meghan; Falzon, Louise; Konrad, Beatrice; Davidson, Karina W Journal of clinical psychopharmacology. 29596148 2018 Mar 28;
Establishment of human pluripotent stem cell-derived pancreatic ?-like cells in the mouse pancreas. Ma, Haiting; Wert, Katherine J; Shvartsman, Dmitry; Melton, Douglas A; Jaenisch, Rudolf Proceedings of the National Academy of Sciences of the United States of America. 29599125 2018 Apr 10;
Antibody-mediated inhibition of MICA and MICB shedding promotes NK cell-driven tumor immunity. Ferrari de Andrade, Lucas; Tay, Rong En; Pan, Deng; Luoma, Adrienne M; Ito, Yoshinaga; Badrinath, Soumya; Tsoucas, Daphne; Franz, Bettina; May Jr., Kenneth F; Harvey, Christopher J; Kobold, Sebastian; Pyrdol, Jason W; Yoon, Charles; Yuan, Guo-Cheng; Hodi, Science (New York, N.Y.). 29599246 2018 03 30;
''A Guide to Gutsy Living'': Patient-Driven Development of a Pediatric Ostomy Toolkit. David, Jennie G; Jofriet, Alexander; Seid, Michael; Margolis, Peter A; ImproveCareNow Pediatric IBD Learning Health System Pediatrics. 29610402 2018 05;
Pharmacokinetics of rifapentine and rifampin in a rabbit model of tuberculosis and correlation with clinical trial data. Rifat, Dalin; Prideaux, Brendan; Savic, Radojka M; Urbanowski, Michael E; Parsons, Teresa L; Luna, Brian; Marzinke, Mark A; Ordonez, Alvaro A; DeMarco, Vincent P; Jain, Sanjay K; Dartois, Veronique; Bishai, William R; Dooley, Kelly E Science translational medicine. 29618565 2018 Apr 04;
Imaging Macrophage-associated Inflammation. Foss, Catherine A; Sanchez-Bautista, Julian; Jain, Sanjay K Seminars in nuclear medicine. 29626941 2018 May;
Joint solution for PET image segmentation, denoising, and partial volume correction. Xu, Ziyue; Gao, Mingchen; Papadakis, Georgios Z; Luna, Brian; Jain, Sanjay; Mollura, Daniel J; Bagci, Ulas Medical image analysis. 29627687 2018 May;
The Microbe Directory: An annotated, searchable inventory of microbes' characteristics. Shaaban, Heba; Westfall, David A; Mohammad, Rawhi; Danko, David; Bezdan, Daniela; Afshinnekoo, Ebrahim; Segata, Nicola; Mason, Christopher E Gates open research 29630066 2018 Jan 05
Recent progress in photoacoustic molecular imaging. Yao, Junjie; Wang, Lihong V Current opinion in chemical biology. 29631120 2018 Apr 06;
Emergence of two near-infrared windows for in vivo and intraoperative SERS. Lane, Lucas A; Xue, Ruiyang; Nie, Shuming Current opinion in chemical biology. 29631122 2018 Apr 06;
Obese Mice Losing Weight Due to trans-10,cis-12 Conjugated Linoleic Acid Supplementation or Food Restriction Harbor Distinct Gut Microbiota. den Hartigh, Laura J; Gao, Zhan; Goodspeed, Leela; Wang, Shari; Das, Arun K; Burant, Charles F; Chait, Alan; Blaser, Martin J The Journal of nutrition 29659960 2018 Apr 01
The evolution of CpG density and lifespan in conserved primate and mammalian promoters. McLain, Adam T; Faulk, Christopher Aging. 29661983 ;
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Unconventional function of an Achaete-Scute homolog as a terminal selector of nociceptive neuron identity. Masoudi, Neda; Tavazoie, Saeed; Glenwinkel, Lori; Ryu, Leesun; Kim, Kyuhyung; Hobert, Oliver PLoS biology. 29672507 2018 04;
Bioengineered Systems and Designer Matrices That Recapitulate the Intestinal Stem Cell Niche. Wang, Yuli; Kim, Raehyun; Hinman, Samuel S; Zwarycz, Bailey; Magness, Scott T; Allbritton, Nancy L Cellular and molecular gastroenterology and hepatology. 29675459 2018 Mar;
The role of adult hippocampal neurogenesis in brain health and disease. Toda, Tomohisa; Parylak, Sarah L; Linker, Sara B; Gage, Fred H Molecular psychiatry. 29679070 2018 Apr 20;
Superresolution imaging of Drosophila tissues using expansion microscopy. Jiang, Nan; Kim, Hyeon-Jin; Chozinski, Tyler J; Azpurua, Jorge E; Eaton, Benjamin A; Vaughan, Joshua C; Parrish, Jay Z Molecular biology of the cell. 29688792 2018 Jun 15;
Formation of Human Colonic Crypt Array by Application of Chemical Gradients Across a Shaped Epithelial Monolayer. Wang, Yuli; Kim, Raehyun; Gunasekara, Dulan B; Reed, Mark I; DiSalvo, Matthew; Nguyen, Daniel L; Bultman, Scott J; Sims, Christopher E; Magness, Scott T; Allbritton, Nancy L Cellular and molecular gastroenterology and hepatology. 29693040 2018;
Extended-Depth 3D Super-Resolution Imaging Using Probe-Refresh STORM. Lin, Danying; Gagnon, Lauren A; Howard, Marco D; Halpern, Aaron R; Vaughan, Joshua C Biophysical journal. 29694874 2018 Apr 24;
Structure of the alternative complex III in a supercomplex with cytochrome oxidase. Sun, Chang; Benlekbir, Samir; Venkatakrishnan, Padmaja; Wang, Yuhang; Hong, Sangjin; Hosler, Jonathan; Tajkhorshid, Emad; Rubinstein, John L; Gennis, Robert B Nature. 29695868 2018 May;
Brief exposure to obesogenic diet disrupts brain dopamine networks. Barry, Robert L; Byun, Nellie E; Williams, Jason M; Siuta, Michael A; Tantawy, Mohammed N; Speed, Nicole K; Saunders, Christine; Galli, Aurelio; Niswender, Kevin D; Avison, Malcolm J PloS one. 29698491 2018;
Field-deployable viral diagnostics using CRISPR-Cas13. Myhrvold, Cameron; Freije, Catherine A; Gootenberg, Jonathan S; Abudayyeh, Omar O; Metsky, Hayden C; Durbin, Ann F; Kellner, Max J; Tan, Amanda L; Paul, Lauren M; Parham, Leda A; Garcia, Kimberly F; Barnes, Kayla G; Chak, Bridget; Mondini, Adriano; Noguei Science (New York, N.Y.). 29700266 2018 04 27;
Retrievable hydrogels for ovarian follicle transplantation and oocyte collection. Rios, Peter D; Kniazeva, Ekaterina; Lee, Hoi Chang; Xiao, Shuo; Oakes, Robert S; Saito, Eiji; Jeruss, Jacqueline S; Shikanov, Ariella; Woodruff, Teresa K; Shea, Lonnie D Biotechnology and bioengineering. 29704433 2018 08;
[11C]Para-Aminobenzoic Acid: A Positron Emission Tomography Tracer Targeting Bacteria-Specific Metabolism. Mutch, Christopher A; Ordonez, Alvaro A; Qin, Hecong; Parker, Matthew; Bambarger, Lauren E; Villanueva-Meyer, Javier E; Blecha, Joseph; Carroll, Valerie; Taglang, Celine; Flavell, Robert; Sriram, Renuka; VanBrocklin, Henry; Rosenberg, Oren; Ohliger, Micha ACS infectious diseases. 29712422 2018 Jul 13;
Droplet Digital PCR for Absolute Quantification of Extracellular MicroRNAs in Plasma and Serum: Quantification of the Cancer Biomarker hsa-miR-141. Giraldez, Maria D; Chevillet, John R; Tewari, Muneesh Methods in molecular biology (Clifton, N.J.). 29717459 2018;
High-resolution mapping of DNA polymerase fidelity using nucleotide imbalances and next-generation sequencing. de Paz, Alexandra M; Cybulski, Thaddeus R; Marblestone, Adam H; Zamft, Bradley M; Church, George M; Boyden, Edward S; Kording, Konrad P; Tyo, Keith E J Nucleic acids research 29718339 2018 07 27
Autism-associated neuroligin-4 mutation selectively impairs glycinergic synaptic transmission in mouse brainstem synapses. Zhang, Bo; Gokce, Ozgun; Hale, W Dylan; Brose, Nils; Südhof, Thomas C The Journal of experimental medicine. 29724786 2018 06 04;
Corticoamygdala Transfer of Socially Derived Information Gates Observational Learning. Allsop, Stephen A; Wichmann, Romy; Mills, Fergil; Burgos-Robles, Anthony; Chang, Chia-Jung; Felix-Ortiz, Ada C; Vienne, Alienor; Beyeler, Anna; Izadmehr, Ehsan M; Glober, Gordon; Cum, Meghan I; Stergiadou, Johanna; Anandalingam, Kavitha K; Farris, Kathryn; Namburi, Praneeth; Leppla, Christopher A; Weddington, Javier C; Nieh, Edward H; Smith, Anne C; Ba, Demba; Brown, Emery N; Tye, Kay M Cell. 29731170 2018 May 31;
Discovery of proteins associated with a predefined genomic locus via dCas9-APEX-mediated proximity labeling. Myers, Samuel A; Wright, Jason; Peckner, Ryan; Kalish, Brian T; Zhang, Feng; Carr, Steven A Nature methods. 29735997 2018 06;
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Bioengineering strategies to accelerate stem cell therapeutics. Madl, Christopher M; Heilshorn, Sarah C; Blau, Helen M Nature. 29769665 2018 05;
Digital Museum of Retinal Ganglion Cells with Dense Anatomy and Physiology. Bae, J Alexander; Mu, Shang; Kim, Jinseop S; Turner, Nicholas L; Tartavull, Ignacio; Kemnitz, Nico; Jordan, Chris S; Norton, Alex D; Silversmith, William M; Prentki, Rachel; Sorek, Marissa; David, Celia; Jones, Devon L; Bland, Doug; Sterling, Amy L R; Park, Jungman; Briggman, Kevin L; Seung, H Sebastian; Eyewirers Cell. 29775596 2018 05 17;
Tuberculous meningitis: a roadmap for advancing basic and translational research. Jain, Sanjay K; Tobin, David M; Tucker, Elizabeth W; Venketaraman, Vishwanath; Ordonez, Alvaro A; Jayashankar, Lakshmi; Siddiqi, Omar K; Hammoud, Dima A; Prasadarao, Nemani V; Sandor, Matyas; Hafner, Richard; Fabry, Zsuzsanna; NIH Tuberculous Meningitis W Nature immunology. 29777209 2018 Jun;
Analysis of Genetically Diverse Macrophages Reveals Local and Domain-wide Mechanisms that Control Transcription Factor Binding and Function. Link, Verena M; Duttke, Sascha H; Chun, Hyun B; Holtman, Inge R; Westin, Emma; Hoeksema, Marten A; Abe, Yohei; Skola, Dylan; Romanoski, Casey E; Tao, Jenhan; Fonseca, Gregory J; Troutman, Ty D; Spann, Nathanael J; Strid, Tobias; Sakai, Mashito; Yu, Miao; Cell. 29779944 2018 Jun 14;
Optogenetic Induction of Colonic Motility in Mice. Hibberd, Timothy J; Feng, Jing; Luo, Jialie; Yang, Pu; Samineni, Vijay K; Gereau 4th, Robert W; Kelley, Nigel; Hu, Hongzhen; Spencer, Nick J Gastroenterology. 29782847 2018 May 18;
Electroencephalographic markers of brain development during sevoflurane anaesthesia in children up to 3 years old. Cornelissen, L; Kim, S E; Lee, J M; Brown, E N; Purdon, P L; Berde, C B British journal of anaesthesia. 29793594 2018 Jun;
Chemoproteomics of matrix metalloproteases in a model of cartilage degeneration suggests functional biomarkers associated with posttraumatic osteoarthritis. Ravindra, Kodihalli C; Ahrens, Caroline C; Wang, Yang; Ramseier, Julie Y; Wishnok, John S; Griffith, Linda G; Grodzinsky, Alan J; Tannenbaum, Steven R The Journal of biological chemistry. 29794029 2018 07 20;
Prediction of response to drug therapy in psychiatric disorders. Stern, Shani; Linker, Sara; Vadodaria, Krishna C; Marchetto, Maria C; Gage, Fred H Open biology 29794033 2018 05
A Near-Complete Spatial Map of Olfactory Receptors in the Mouse Main Olfactory Epithelium. Tan, Longzhi; Xie, Xiaoliang Sunney Chemical senses. 29796642 2018 Jul 05;
Theoretical study of the benefit of long axial field-of-view PET on region of interest quantification. Zhang, Xuezhu; Badawi, Ramsey D; Cherry, Simon R; Qi, Jinyi Physics in medicine and biology. 29799814 2018 Jun 27;
Social stress shortens lifespan in mice. Razzoli, Maria; Nyuyki-Dufe, Kewir; Gurney, Allison; Erickson, Connor; McCallum, Jacob; Spielman, Nicholas; Marzullo, Marta; Patricelli, Jessica; Kurata, Morito; Pope, Emily A; Touma, Chadi; Palme, Rupert; Largaespada, David A; Allison, David B; Bartolomucci, Alessandro Aging cell. 29806171 2018 08;
ZFP36 RNA-binding proteins restrain T cell activation and anti-viral immunity. Moore, Michael J; Blachere, Nathalie E; Fak, John J; Park, Christopher Y; Sawicka, Kirsty; Parveen, Salina; Zucker-Scharff, Ilana; Moltedo, Bruno; Rudensky, Alexander Y; Darnell, Robert B eLife. 29848443 2018 05 31;
Aptamer Recognition of Multiplexed Small-Molecule-Functionalized Substrates. Nakatsuka, Nako; Cao, Huan H; Deshayes, Stephanie; Melkonian, Arin L; Kasko, Andrea M; Weiss, Paul S; Andrews, Anne M ACS applied materials & interfaces. 29851335 2018 Jul 18;
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Patient preferences for Personalized (N-of-1) Trials: A conjoint analysis. Moise, Nathalie; Wood, Dallas; Kuen K Cheung, Ying; Duan, Naihua; Onge, Tara St; Duer-Hefele, Joan; Pu, Tiffany; Davidson, Karina W; Kronish, Ian M; members of the ?Personalized Trial Collaboratory? Journal of clinical epidemiology. 29859242 2018 May 30;
APOE4 Causes Widespread Molecular and Cellular Alterations Associated with Alzheimer's Disease Phenotypes in Human iPSC-Derived Brain Cell Types. Lin, Yuan-Ta; Seo, Jinsoo; Gao, Fan; Feldman, Heather M; Wen, Hsin-Lan; Penney, Jay; Cam, Hugh P; Gjoneska, Elizabeta; Raja, Waseem K; Cheng, Jemmie; Rueda, Richard; Kritskiy, Oleg; Abdurrob, Fatema; Peng, Zhuyu; Milo, Blerta; Yu, Chung Jong; Elmsaouri, S Neuron. 29861287 2018 Jun 27;
Transdifferentiation of human adult peripheral blood T cells into neurons. Tanabe, Koji; Ang, Cheen Euong; Chanda, Soham; Olmos, Victor Hipolito; Haag, Daniel; Levinson, Douglas F; Südhof, Thomas C; Wernig, Marius Proceedings of the National Academy of Sciences of the United States of America. 29866841 2018 06 19;
Left-Lateralized Contributions of Saccades to Cortical Activity During a One-Back Word Recognition Task. Chang, Yu-Cherng C; Khan, Sheraz; Taulu, Samu; Kuperberg, Gina; Brown, Emery N; Hämäläinen, Matti S; Temereanca, Simona Frontiers in neural circuits. 29867372 2018;
Latent variable modeling for the microbiome. Sankaran, Kris; Holmes, Susan P Biostatistics (Oxford, England). 29868846 2018 Jun 03;
Insulin Hexamer-Caged Gadolinium Ion as MRI Contrast-o-phore. Taylor, Steven K; Tran, Timothy H; Liu, Michael Z; Harris, Paul E; Sun, Yanping; Jambawalikar, Sachin R; Tong, Liang; Stojanovic, Milan N Chemistry (Weinheim an der Bergstrasse, Germany). 29873848 2018 Jul 25;
Systemic Upregulation of IL-10 (Interleukin-10) Using a Nonimmunogenic Vector Reduces Growth and Rate of Dissecting Abdominal Aortic Aneurysm. Adam, Matti; Kooreman, Nigel Geoffrey; Jagger, Ann; Wagenhäuser, Markus U; Mehrkens, Dennis; Wang, Yongming; Kayama, Yosuke; Toyama, Kensuke; Raaz, Uwe; Schellinger, Isabel N; Maegdefessel, Lars; Spin, Joshua M; Hamming, Jaap F; Quax, Paul H A; Baldus, Stephan; Wu, Joseph C; Tsao, Philip S Arteriosclerosis, thrombosis, and vascular biology. 29880489 2018 08;
Unsupervised Discovery of Demixed, Low-Dimensional Neural Dynamics across Multiple Timescales through Tensor Component Analysis. Williams, Alex H; Kim, Tony Hyun; Wang, Forea; Vyas, Saurabh; Ryu, Stephen I; Shenoy, Krishna V; Schnitzer, Mark; Kolda, Tamara G; Ganguli, Surya Neuron. 29887338 2018 06 27;
Dynamics and Spatial Genomics of the Nascent Transcriptome by Intron seqFISH. Shah, Sheel; Takei, Yodai; Zhou, Wen; Lubeck, Eric; Yun, Jina; Eng, Chee-Huat Linus; Koulena, Noushin; Cronin, Christopher; Karp, Christoph; Liaw, Eric J; Amin, Mina; Cai, Long Cell. 29887381 2018 May 31;
SSMART: sequence-structure motif identification for RNA-binding proteins. Munteanu, Alina; Mukherjee, Neelanjan; Ohler, Uwe Bioinformatics (Oxford, England). 29893814 2018 12 01;
Single-breath-hold photoacoustic computed tomography of the breast. Lin, Li; Hu, Peng; Shi, Junhui; Appleton, Catherine M; Maslov, Konstantin; Li, Lei; Zhang, Ruiying; Wang, Lihong V Nature communications. 29907740 ;
Grafting or pruning in the animal tree: lateral gene transfer and gene loss? Dunning Hotopp, Julie C BMC genomics. 29914363 2018 Jun 18;
Matrix Metalloproteinase Inhibition in a Murine Model of Cavitary Tuberculosis Paradoxically Worsens Pathology. Ordonez, Alvaro A; Pokkali, Supriya; Sanchez-Bautista, Julian; Klunk, Mariah H; Urbanowski, Michael E; Kübler, André; Bishai, William R; Elkington, Paul T; Jain, Sanjay K The Journal of infectious diseases. 29920600 2018 Jun 16;
Late-life targeting of the IGF-1 receptor improves healthspan and lifespan in female mice. Mao, Kai; Quipildor, Gabriela Farias; Tabrizian, Tahmineh; Novaj, Ardijana; Guan, Fangxia; Walters, Ryan O; Delahaye, Fabien; Hubbard, Gene B; Ikeno, Yuji; Ejima, Keisuke; Li, Peng; Allison, David B; Salimi-Moosavi, Hossein; Beltran, Pedro J; Cohen, Pinchas; Barzilai, Nir; Huffman, Derek M Nature communications. 29921922 2018 06 19;
Microfluidics-enabled rational design of immunomagnetic nanomaterials and their shape effect on liquid biopsy. Hao, Nanjing; Nie, Yuan; Shen, Ting; Zhang, John X J Lab on a chip. 29923569 2018 Jul 10;
Three-dimensional intact-tissue sequencing of single-cell transcriptional states. Wang, Xiao; Allen, William E; Wright, Matthew A; Sylwestrak, Emily L; Samusik, Nikolay; Vesuna, Sam; Evans, Kathryn; Liu, Cindy; Ramakrishnan, Charu; Liu, Jia; Nolan, Garry P; Bava, Felice-Alessio; Deisseroth, Karl Science (New York, N.Y.). 29930089 2018 07 27;
Expansion microscopy: enabling single cell analysis in intact biological systems. Alon, Shahar; Huynh, Grace H; Boyden, Edward S The FEBS journal. 29938896 2019 Apr;
Formation of arrays of planar, murine, intestinal crypts possessing a stem/proliferative cell compartment and differentiated cell zone. Kim, Raehyun; Wang, Yuli; Hwang, Shee-Hwan J; Attayek, Peter J; Smiddy, Nicole M; Reed, Mark I; Sims, Christopher E; Allbritton, Nancy L Lab on a chip. 29944153 2018 07 24;
APOE4 Causes Widespread Molecular and Cellular Alterations Associated with Alzheimer's Disease Phenotypes in Human iPSC-Derived Brain Cell Types. Lin, Yuan-Ta; Seo, Jinsoo; Gao, Fan; Feldman, Heather M; Wen, Hsin-Lan; Penney, Jay; Cam, Hugh P; Gjoneska, Elizabeta; Raja, Waseem K; Cheng, Jemmie; Rueda, Richard; Kritskiy, Oleg; Abdurrob, Fatema; Peng, Zhuyu; Milo, Blerta; Yu, Chung Jong; Elmsaouri, Sara; Dey, Dilip; Ko, Tak; Yankner, Bruce A; Tsai, Li-Huei Neuron 29953873 2018 Jun 27
Dual-axis illumination for virtually augmenting the detection view of optical-resolution photoacoustic microscopy. Hsu, Hsun-Chia; Li, Lei; Yao, Junjie; Wong, Terence T W; Shi, Junhui; Chen, Ruimin; Zhou, Qifa; Wang, Lihong Journal of biomedical optics. 29981225 2018 Jul;
Dynamic microRNA activity identifies therapeutic targets in trastuzumab-resistant HER2+ breast cancer. Decker, Joseph T; Hall, Matthew S; Blaisdell, Rachel B; Schwark, Kallen; Jeruss, Jacqueline S; Shea, Lonnie D Biotechnology and bioengineering. 29981261 2018 10;
Snapshots of an evolved DNA polymerase pre- and post-incorporation of an unnatural nucleotide. Singh, Isha; Laos, Roberto; Hoshika, Shuichi; Benner, Steven A; Georgiadis, Millie M Nucleic acids research. 29986111 2018 Jul 09;
Imaging Pulmonary Foreign Body Reaction Using [125I]iodo-DPA-713 SPECT/CT in Mice. Sanchez-Bautista, Julian; Foss, Catherine A; Ordonez, Alvaro A; Klunk, Mariah H; Jain, Sanjay K Molecular imaging and biology : MIB : the official publication of the Academy of Molecular Imaging. 29987615 2018 Jul 09;
Volumetric, Nanoscale Optical Imaging of Mouse and Human Kidney via Expansion Microscopy. Chozinski, Tyler J; Mao, Chenyi; Halpern, Aaron R; Pippin, Jeffrey W; Shankland, Stuart J; Alpers, Charles E; Najafian, Behzad; Vaughan, Joshua C Scientific reports. 29991751 2018 Jul 10;
Accommodation of Helical Imperfections in Rhodobacter sphaeroides Argonaute Ternary Complexes with Guide RNA and Target DNA. Liu, Yiwei; Esyunina, Daria; Olovnikov, Ivan; Teplova, Marianna; Kulbachinskiy, Andrey; Aravin, Alexei A; Patel, Dinshaw J Cell reports. 29996105 2018 07 10;
Ultraconserved Elements Occupy Specific Arenas of Three-Dimensional Mammalian Genome Organization. McCole, Ruth B; Erceg, Jelena; Saylor, Wren; Wu, Chao-Ting Cell reports. 29996107 2018 Jul 10;
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Patch-Seq Protocol to Analyze the Electrophysiology, Morphology and Transcriptome of Whole Single Neurons Derived From Human Pluripotent Stem Cells. van den Hurk, Mark; Erwin, Jennifer A; Yeo, Gene W; Gage, Fred H; Bardy, Cedric Frontiers in molecular neuroscience. 30147644 2018;
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Biomechanics show stem cell necessity for effective treatment of volumetric muscle loss using bioengineered constructs. Quarta, Marco; Cromie Lear, Melinda J; Blonigan, Justin; Paine, Patrick; Chacon, Robert; Rando, Thomas A NPJ Regenerative medicine. 30323949 2018;
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Ultrafast microfluidic synthesis of hierarchical triangular silver core-silica shell nanoplatelet toward enhanced cellular internalization. Hao, Nanjing; Nie, Yuan; Xu, Zhe; Zhang, John X J Journal of colloid and interface science. 30771632 2019 Apr 15;
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The effects of trans-resveratrol on insulin resistance, inflammation, and microbiota in men with the metabolic syndrome: A pilot randomized, placebo-controlled clinical trial. Walker, Jeanne M; Eckardt, Patricia; Aleman, Jose O; da Rosa, Joel Correa; Liang, Yupu; Iizumi, Tadasu; Etheve, Stephane; Blaser, Martin J; L Breslow, Jan; Holt, Peter R Journal of clinical and translational research. 30873501 2019 Jan 10;
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A BODIPY-Based Donor/Donor-Acceptor System: Towards Highly Efficient Long-Wavelength-Excitable Near-IR Polymer Dots with Narrow and Strong Absorption Features. Chen, Lei; Chen, Dandan; Jiang, Yifei; Zhang, Jicheng; Yu, Jiangbo; DuFort, Christopher C; Hingorani, Sunil R; Zhang, Xuanjun; Wu, Changfeng; Chiu, Daniel T Angewandte Chemie (International ed. in English). 30912228 2019 Mar 25;
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High-throughput, label-free, single-cell photoacoustic microscopy of intratumoral metabolic heterogeneity. Hai, Pengfei; Imai, Toru; Xu, Song; Zhang, Ruiying; Aft, Rebecca L; Zou, Jun; Wang, Lihong V Nature biomedical engineering. 30936431 2019 Apr 01;
Distinct hippocampal engrams control extinction and relapse of fear memory. Lacagnina, Anthony F; Brockway, Emma T; Crovetti, Chelsea R; Shue, Francis; McCarty, Meredith J; Sattler, Kevin P; Lim, Sean C; Santos, Sofia Leal; Denny, Christine A; Drew, Michael R Nature neuroscience. 30936555 2019 05;
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Global identification of functional microRNA-mRNA interactions in Drosophila. Wessels, Hans-Hermann; Lebedeva, Svetlana; Hirsekorn, Antje; Wurmus, Ricardo; Akalin, Altuna; Mukherjee, Neelanjan; Ohler, Uwe Nature communications. 30967537 2019 04 09;
Characterization of Lipid-Protein Interactions and Lipid-Mediated Modulation of Membrane Protein Function through Molecular Simulation. Muller, Melanie P; Jiang, Tao; Sun, Chang; Lihan, Muyun; Pant, Shashank; Mahinthichaichan, Paween; Trifan, Anda; Tajkhorshid, Emad Chemical reviews. 30978005 2019 May 08;
Development of a Synthetic 3-ketosteroid ?1-dehydrogenase for the Generation of a Novel Catabolic Pathway Enabling Cholesterol Degradation in Human Cells. D'Arcy, Brandon M; Swingle, Mark R; Schambeau, Lindsay; Pannell, Lewis; Prakash, Aishwarya; Honkanen, Richard E Scientific reports. 30979909 2019 Apr 12;
Microfluidics-Based Organism Isolation from Whole Blood: An Emerging Tool for Bloodstream Infection Diagnosis. Burklund, Alison; Zhang, John X J Annals of biomedical engineering. 30980291 2019 Jul;
Enzyme-responsive progelator cyclic peptides for minimally invasive delivery to the heart post-myocardial infarction. Carlini, Andrea S; Gaetani, Roberto; Braden, Rebecca L; Luo, Colin; Christman, Karen L; Gianneschi, Nathan C Nature communications. 30988291 2019 04 15;
Citrullination of fibronectin alters integrin clustering and focal adhesion stability promoting stromal cell invasion. Stefanelli, Victoria L; Choudhury, Shilpa; Hu, Ping; Liu, Yining; Schwenzer, Anja; Yeh, Chiuan-Ren; Chambers, Dwight M; Pesson, Kelly; Li, Wei; Segura, Tatiana; Midwood, Kim S; Torres, Matthew; Barker, Thomas H Matrix biology : journal of the International Society for Matrix Biology. 31004743 2019 09;
Glutamate spillover in C. elegans triggers repetitive behavior through presynaptic activation of MGL-2/mGluR5. Katz, Menachem; Corson, Francis; Keil, Wolfgang; Singhal, Anupriya; Bae, Andrea; Lu, Yun; Liang, Yupu; Shaham, Shai Nature communications. 31015396 2019 04 23;
A cryptography-based approach for movement decoding. Dyer, Eva L; Gheshlaghi Azar, Mohammad; Perich, Matthew G; Fernandes, Hugo L; Naufel, Stephanie; Miller, Lee E; Körding, Konrad P Nature biomedical engineering 31015712 2017 12
Chemical composition of DNA-encoded libraries, past present and future. Dickson, Paige; Kodadek, Thomas Organic & biomolecular chemistry. 31017595 2019 May 15;
Serotonin transporter-ibogaine complexes illuminate mechanisms of inhibition and transport. Coleman, Jonathan A; Yang, Dongxue; Zhao, Zhiyu; Wen, Po-Chao; Yoshioka, Craig; Tajkhorshid, Emad; Gouaux, Eric Nature. 31019304 2019 05;
Using a Culturally Tailored Narrative to Increase Cervical Cancer Detection Among Spanish-Speaking Mexican-American Women. Ochoa, Carol Y; Murphy, Sheila T; Frank, Lauren B; Baezconde-Garbanati, Lourdes A Journal of cancer education : the official journal of the American Association for Cancer Education. 31020621 2019 Apr 24;
Structural basis for the promiscuous PAM recognition by Corynebacterium diphtheriae Cas9. Hirano, Seiichi; Abudayyeh, Omar O; Gootenberg, Jonathan S; Horii, Takuro; Ishitani, Ryuichiro; Hatada, Izuho; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu Nature communications. 31036811 2019 04 29;
Molecular transport through primary human small intestinal monolayers by culture on a collagen scaffold with a gradient of chemical cross-linking. Speer, Jennifer E; Gunasekara, Dulan B; Wang, Yuli; Fallon, John K; Attayek, Peter J; Smith, Philip C; Sims, Christopher E; Allbritton, Nancy L Journal of biological engineering. 31061676 2019;
A rapid method for determining protein diffusion through hydrogels for regenerative medicine applications. Hettiaratchi, Marian H; Schudel, Alex; Rouse, Tel; García, Andrés J; Thomas, Susan N; Guldberg, Robert E; McDevitt, Todd C APL bioengineering 31069307 2018 Jun
A multiplexed DNA FISH strategy for assessing genome architecture in Caenorhabditis elegans. Fields, Brandon D; Nguyen, Son C; Nir, Guy; Kennedy, Scott eLife. 31084706 2019 May 14;
Imaging-based pooled CRISPR screening reveals regulators of lncRNA localization. Wang, Chong; Lu, Tian; Emanuel, George; Babcock, Hazen P; Zhuang, Xiaowei Proceedings of the National Academy of Sciences of the United States of America. 31085639 2019 May 28;
Islands of retroelements are major components of Drosophila centromeres. Chang, Ching-Ho; Chavan, Ankita; Palladino, Jason; Wei, Xiaolu; Martins, Nuno M C; Santinello, Bryce; Chen, Chin-Chi; Erceg, Jelena; Beliveau, Brian J; Wu, Chao-Ting; Larracuente, Amanda M; Mellone, Barbara G PLoS biology. 31086362 2019 05;
Assessment of SIRT2 Inhibitors in Mouse Models of Cancer. Negrón Abril, Yashira L; Fernández, Irma; Weiss, Robert S Methods in molecular biology (Clifton, N.J.). 31087297 2019;
Unexpected connections between type VI-B CRISPR-Cas systems, bacterial natural competence, ubiquitin signaling network and DNA modification through a distinct family of membrane proteins. Makarova, Kira S; Gao, Linyi; Zhang, Feng; Koonin, Eugene V FEMS microbiology letters. 31089700 2019 04 01;
Mesenchymal Stromal Cells Are Required for Regeneration and Homeostatic Maintenance of Skeletal Muscle. Wosczyna, Michael N; Konishi, Colin T; Perez Carbajal, Edgar E; Wang, Theodore T; Walsh, Rachel A; Gan, Qiang; Wagner, Mark W; Rando, Thomas A Cell reports. 31091443 2019 May 14;
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Systematic evasion of the restriction-modification barrier in bacteria. Johnston, Christopher D; Cotton, Sean L; Rittling, Susan R; Starr, Jacqueline R; Borisy, Gary G; Dewhirst, Floyd E; Lemon, Katherine P Proceedings of the National Academy of Sciences of the United States of America. 31097593 2019 Jun 04;
The processivity factor Pol32 mediates nuclear localization of DNA polymerase delta and prevents chromosomal fragile site formation in Drosophila development. Ji, Jingyun; Tang, Xiaona; Hu, Wen; Maggert, Keith A; Rong, Yikang S PLoS genetics. 31100062 2019 May;
SABER amplifies FISH: enhanced multiplexed imaging of RNA and DNA in cells and tissues. Kishi, Jocelyn Y; Lapan, Sylvain W; Beliveau, Brian J; West, Emma R; Zhu, Allen; Sasaki, Hiroshi M; Saka, Sinem K; Wang, Yu; Cepko, Constance L; Yin, Peng Nature methods. 31110282 2019 Jun;
Caspase-8 restricts natural killer cell accumulation during MCMV Infection. Feng, Yanjun; Daley-Bauer, Lisa P; Roback, Linda; Potempa, Marc; Lanier, Lewis L; Mocarski, Edward S Medical microbiology and immunology. 31115653 2019 Aug;
Multiplexed detection of RNA using MERFISH and branched DNA amplification. Xia, Chenglong; Babcock, Hazen P; Moffitt, Jeffrey R; Zhuang, Xiaowei Scientific reports. 31118500 2019 May 22;
Structural Insights into the Lipid A Transport Pathway in MsbA. Padayatti, Pius S; Lee, Sung Chang; Stanfield, Robyn L; Wen, Po-Chao; Tajkhorshid, Emad; Wilson, Ian A; Zhang, Qinghai Structure (London, England : 1993). 31130486 2019 Apr 25;
Constitutive splicing and economies of scale in gene expression. Ding, Fangyuan; Elowitz, Michael B Nature structural & molecular biology. 31133700 2019 Jun;
Whole-genome deep-learning analysis identifies contribution of noncoding mutations to autism risk. Zhou, Jian; Park, Christopher Y; Theesfeld, Chandra L; Wong, Aaron K; Yuan, Yuan; Scheckel, Claudia; Fak, John J; Funk, Julien; Yao, Kevin; Tajima, Yoko; Packer, Alan; Darnell, Robert B; Troyanskaya, Olga G Nature genetics. 31133750 2019 06;
Human cGAS catalytic domain has an additional DNA-binding interface that enhances enzymatic activity and liquid-phase condensation. Xie, Wei; Lama, Lodoe; Adura, Carolina; Tomita, Daisuke; Glickman, J Fraser; Tuschl, Thomas; Patel, Dinshaw J Proceedings of the National Academy of Sciences of the United States of America. 31142647 2019 Jun 11;
Enteric hyperoxaluria: role of microbiota and antibiotics. Liu, Menghan; Nazzal, Lama Current opinion in nephrology and hypertension. 31145706 2019 07;
Direct Reprogramming of Human Neurons Identifies MARCKSL1 as a Pathogenic Mediator of Valproic Acid-Induced Teratogenicity. Chanda, Soham; Ang, Cheen Euong; Lee, Qian Yi; Ghebrial, Michael; Haag, Daniel; Shibuya, Yohei; Wernig, Marius; Südhof, Thomas C Cell stem cell. 31155484 2019 Jul 03;
Specific factors in blood from young but not old mice directly promote synapse formation and NMDA-receptor recruitment. Gan, Kathlyn J; Südhof, Thomas C Proceedings of the National Academy of Sciences of the United States of America. 31160442 2019 Jun 18;
Accurate Estimation of Neural Population Dynamics without Spike Sorting. Trautmann, Eric M; Stavisky, Sergey D; Lahiri, Subhaneil; Ames, Katherine C; Kaufman, Matthew T; O'Shea, Daniel J; Vyas, Saurabh; Sun, Xulu; Ryu, Stephen I; Ganguli, Surya; Shenoy, Krishna V Neuron. 31171448 2019 07 17;
RNA-guided DNA insertion with CRISPR-associated transposases. Strecker, Jonathan; Ladha, Alim; Gardner, Zachary; Schmid-Burgk, Jonathan L; Makarova, Kira S; Koonin, Eugene V; Zhang, Feng Science (New York, N.Y.). 31171706 2019 Jun 06;
The role of environmental exposures and the epigenome in health and disease. Perera, Bambarendage P U; Faulk, Christopher; Svoboda, Laurie K; Goodrich, Jaclyn M; Dolinoy, Dana C Environmental and molecular mutagenesis. 31177562 2020 01;
Age Mosaicism across Multiple Scales in Adult Tissues. Arrojo E Drigo, Rafael; Lev-Ram, Varda; Tyagi, Swati; Ramachandra, Ranjan; Deerinck, Thomas; Bushong, Eric; Phan, Sebastien; Orphan, Victoria; Lechene, Claude; Ellisman, Mark H; Hetzer, Martin W Cell metabolism. 31178361 2019 08 06;
Crossmodal congruency effect scores decrease with repeat test exposure. Blustein, Daniel; Gill, Satinder; Wilson, Adam; Sensinger, Jon PeerJ. 31179180 2019;
Therapeutic Effect of Y-27632 on Tumorigenesis and Cisplatin-Induced Peripheral Sensory Loss through RhoA-NF-κB. Zhu, Yi; Howard, George A; Pittman, Keith; Boykin, Christi; Herring, Laura E; Wilkerson, Emily M; Verbanac, Kathryn; Lu, Qun Molecular cancer research : MCR 31189689 2019 09
A meta-analysis of procedures to change implicit measures. Forscher, Patrick S; Lai, Calvin K; Axt, Jordan R; Ebersole, Charles R; Herman, Michelle; Devine, Patricia G; Nosek, Brian A Journal of personality and social psychology. 31192631 2019 Sep;
Exact distance measurements for structure and dynamics in solid proteins by fast-magic-angle-spinning NMR. Grohe, Kristof; Nimerovsky, Evgeny; Singh, Himanshu; Vasa, Suresh K; Söldner, Benedikt; Vögeli, Beat; Rienstra, Chad M; Linser, Rasmus Chemical communications (Cambridge, England). 31199417 2019 Jul 14;
Dual lineage tracing shows that glomerular parietal epithelial cells can transdifferentiate toward the adult podocyte fate. Kaverina, Natalya V; Eng, Diana G; Freedman, Benjamin S; Kutz, J Nathan; Chozinski, Tyler J; Vaughan, Joshua C; Miner, Jeffrey H; Pippin, Jeffrey W; Shankland, Stuart J Kidney international. 31200942 2019 Mar 29;
Modelling diastolic dysfunction in induced pluripotent stem cell-derived cardiomyocytes from hypertrophic cardiomyopathy patients. Wu, Haodi; Yang, Huaxiao; Rhee, June-Wha; Zhang, Joe Z; Lam, Chi Keung; Sallam, Karim; Chang, Alex C Y; Ma, Ning; Lee, Jaecheol; Zhang, Hao; Blau, Helen M; Bers, Donald M; Wu, Joseph C European heart journal. 31219556 2019 12 01;
Ten quick tips for effective dimensionality reduction. Nguyen, Lan Huong; Holmes, Susan PLoS computational biology. 31220072 2019 06;
Simultaneous motor preparation and execution in a last-moment reach correction task. Ames, K Cora; Ryu, Stephen I; Shenoy, Krishna V Nature communications. 31221968 2019 06 20;
Nucleic Acid Detection of Plant Genes Using CRISPR-Cas13. Abudayyeh, Omar O; Gootenberg, Jonathan S; Kellner, Max J; Zhang, Feng The CRISPR journal. 31225754 2019 06;
PennPET Explorer: Design and Preliminary Performance of a Whole-body Imager. Karp, Joel S; Vishwanath, Varsha; Geagan, Michael; Muehllehner, Gerd; Pantel, Austin; Parma, Michael; Perkins, Amy; Schmall, Jeffrey; Werner, Matthew; Daube-Witherspoon, Margaret E Journal of nuclear medicine : official publication, Society of Nuclear Medicine. 31227573 2019 Jun 21;
Genome wide analysis of 3' UTR sequence elements and proteins regulating mRNA stability during maternal-to-zygotic transition in zebrafish. Vejnar, Charles E; Abdel Messih, Mario; Takacs, Carter M; Yartseva, Valeria; Oikonomou, Panos; Christiano, Romain; Stoeckius, Marlon; Lau, Stephanie; Lee, Miler T; Beaudoin, Jean-Denis; Musaev, Damir; Darwich-Codore, Hiba; Walther, Tobias C; Tavazoie, Sae Genome research. 31227602 2019 07;
Atlas of Subcellular RNA Localization Revealed by APEX-Seq. Fazal, Furqan M; Han, Shuo; Parker, Kevin R; Kaewsapsak, Pornchai; Xu, Jin; Boettiger, Alistair N; Chang, Howard Y; Ting, Alice Y Cell. 31230715 2019 Jul 11;
DNA Microscopy: Optics-free Spatio-genetic Imaging by a Stand-Alone Chemical Reaction. Weinstein, Joshua A; Regev, Aviv; Zhang, Feng Cell. 31230717 2019 06 27;
Effects of Integrated Brain, Body, and Social (IBBS) intervention on ERP measures of attentional control in children with ADHD. Smith, Stephanie D; Crowley, Michael J; Ferrey, Anne; Ramsey, Kathleen; Wexler, Bruce E; Leckman, James F; Sukhodolsky, Denis G Psychiatry research. 31233935 2019 Aug;
Allosteric modulation of a human protein kinase with monobodies. Zorba, Adelajda; Nguyen, Vy; Koide, Akiko; Hoemberger, Marc; Zheng, Yuejiao; Kutter, Steffen; Kim, Chansik; Koide, Shohei; Kern, Dorothee Proceedings of the National Academy of Sciences of the United States of America. 31239342 2019 Jul 09;
The rostromedial tegmental nucleus: a key modulator of pain and opioid analgesia. Taylor, Norman E; Long, Hu; Pei, JunZhu; Kukutla, Phanidhar; Phero, Anthony; Hadaegh, Farnaz; Abdelnabi, Ahmed; Solt, Ken; Brenner, Gary J Pain. 31246732 2019 11;
The dormancy-specific regulator, SutA, is intrinsically disordered and modulates transcription initiation in Pseudomonas aeruginosa. Bergkessel, Megan; Babin, Brett M; VanderVelde, David; Sweredoski, Michael J; Moradian, Annie; Eggleston-Rangel, Roxana; Hess, Sonja; Tirrell, David A; Artsimovitch, Irina; Newman, Dianne K Molecular microbiology. 31254296 2019 Sep;
Neuroligin-4 Regulates Excitatory Synaptic Transmission in Human Neurons. Marro, Samuele G; Chanda, Soham; Yang, Nan; Janas, Justyna A; Valperga, Giulio; Trotter, Justin; Zhou, Bo; Merrill, Sean; Yousif, Issa; Shelby, Hannah; Vogel, Hannes; Kalani, M Yashar S; Südhof, Thomas C; Wernig, Marius Neuron. 31257103 2019 08 21;
CAESNet: Convolutional AutoEncoder based Semi-supervised Network for improving multiclass classification of endomicroscopic images. Tong, Li; Wu, Hang; Wang, May D Journal of the American Medical Informatics Association : JAMIA. 31260038 2019 11 01;
Kidney-in-a-lymph node: A novel organogenesis assay to model human renal development and test nephron progenitor cell fates. Francipane, Maria Giovanna; Han, Bing; Oxburgh, Leif; Sims-Lucas, Sunder; Li, Zhongwei; Lagasse, Eric Journal of tissue engineering and regenerative medicine. 31267702 2019 Sep;
Multi-immersion open-top light-sheet microscope for high-throughput imaging of cleared tissues. Glaser, Adam K; Reder, Nicholas P; Chen, Ye; Yin, Chengbo; Wei, Linpeng; Kang, Soyoung; Barner, Lindsey A; Xie, Weisi; McCarty, Erin F; Mao, Chenyi; Halpern, Aaron R; Stoltzfus, Caleb R; Daniels, Jonathan S; Gerner, Michael Y; Nicovich, Philip R; Vaughan, Nature communications. 31273194 2019 Jul 04;
Battery-free, fully implantable optofluidic cuff system for wireless optogenetic and pharmacological neuromodulation of peripheral nerves. Zhang, Yi; Mickle, Aaron D; Gutruf, Philipp; McIlvried, Lisa A; Guo, Hexia; Wu, Yixin; Golden, Judith P; Xue, Yeguang; Grajales-Reyes, Jose G; Wang, Xueju; Krishnan, Siddharth; Xie, Yiwen; Peng, Dongsheng; Su, Chun-Ju; Zhang, Fengyi; Reeder, Jonathan T; Vogt, Sherri K; Huang, Yonggang; Rogers, John A; Gereau 4th, Robert W Science advances. 31281895 2019 Jul;
Caspase-8 restricts antiviral CD8 T cell hyperaccumulation. Feng, Yanjun; Daley-Bauer, Lisa P; Roback, Linda; Guo, Hongyan; Koehler, Heather S; Potempa, Marc; Lanier, Lewis L; Mocarski, Edward S Proceedings of the National Academy of Sciences of the United States of America. 31285326 2019 Jul 23;
Longitudinal changes of microbiome composition and microbial metabolomics after surgical weight loss in individuals with obesity. Shen, Nan; Caixàs, Assumpta; Ahlers, Michael; Patel, Kapila; Gao, Zhan; Dutia, Roxanne; Blaser, Martin J; Clemente, Jose C; Laferrère, Blandine Surgery for obesity and related diseases : official journal of the American Society for Bariatric Surgery. 31296445 2019 Aug;
A cytosine deaminase for programmable single-base RNA editing. Abudayyeh, Omar O; Gootenberg, Jonathan S; Franklin, Brian; Koob, Jeremy; Kellner, Max J; Ladha, Alim; Joung, Julia; Kirchgatterer, Paul; Cox, David B T; Zhang, Feng Science (New York, N.Y.). 31296651 2019 07 26;
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Radiosynthesis and PET Bioimaging of 76Br-Bedaquiline in a Murine Model of Tuberculosis. Ordonez, Alvaro A; Carroll, Laurence S; Abhishek, Sudhanshu; Mota, Filipa; Ruiz-Bedoya, Camilo A; Klunk, Mariah H; Singh, Alok K; Freundlich, Joel S; Mease, Ronnie C; Jain, Sanjay K ACS infectious diseases. 31345032 2019 Jul 29;
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Activity-Dependent Regulation of the Proapoptotic BH3-Only Gene egl-1 in a Living Neuron Pair in Caenorhabditis elegans. Cohn, Jesse; Dwivedi, Vivek; Valperga, Giulio; Zarate, Nicole; de Bono, Mario; Horvitz, H Robert; Pierce, Jonathan T G3 (Bethesda, Md.). 31519744 2019 Sep 13;
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Microporous scaffolds loaded with immunomodulatory lentivirus to study the contribution of immune cell populations to tumor cell recruitment in vivo. Bushnell, Grace G; Rao, Shreyas S; Hartfield, Rachel M; Zhang, Yining; Oakes, Robert S; Jeruss, Jacqueline S; Shea, Lonnie D Biotechnology and bioengineering. 31544959 2019 Sep 23;
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An automated microfluidic device for time-lapse imaging of mouse embryonic stem cells. Laing, Adam F; Tirumala, Venkat; Hegarty, Evan; Mondal, Sudip; Zhao, Peisen; Hamilton, William B; Brickman, Joshua M; Ben-Yakar, Adela Biomicrofluidics. 31558920 2019 Sep;
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High-Throughput Mapping of Long-Range Neuronal Projection Using In Situ Sequencing. Chen, Xiaoyin; Sun, Yu-Chi; Zhan, Huiqing; Kebschull, Justus M; Fischer, Stephan; Matho, Katherine; Huang, Z Josh; Gillis, Jesse; Zador, Anthony M Cell. 31626774 2019 10 17;
Optical Pooled Screens in Human Cells. Feldman, David; Singh, Avtar; Schmid-Burgk, Jonathan L; Carlson, Rebecca J; Mezger, Anja; Garrity, Anthony J; Zhang, Feng; Blainey, Paul C Cell. 31626775 2019 Oct 17;
Phenylalanine Monitoring via Aptamer-Field-Effect Transistor Sensors. Cheung, Kevin M; Yang, Kyung-Ae; Nakatsuka, Nako; Zhao, Chuanzhen; Ye, Mao; Jung, Michael E; Yang, Hongyan; Weiss, Paul S; Stojanovi?, Milan N; Andrews, Anne M ACS sensors. 31631652 2019 Dec 27;
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Implementing a Novel Quality Improvement-Based Approach to Data Quality Monitoring and Enhancement in a Multipurpose Clinical Registry. Pratt, Jesse; Jeffers, Daniel; King, Eileen C; Kappelman, Michael D; Collins, Jennifer; Margolis, Peter; Baron, Howard; Bass, Julie A; Bassett, Mikelle D; Beasley, Genie L; Benkov, Keith J; Bornstein, Jeffrey A; Cabrera, José M; Crandall, Wallace; Dancel, Liz D; Garin-Laflam, Monica P; Grunow, John E; Hirsch, Barry Z; Hoffenberg, Edward; Israel, Esther; Jester, Traci W; Kiparissi, Fevronia; Lakhole, Arathi; Lapsia, Sameer P; Minar, Phillip; Navarro, Fernando A; Neef, Haley; Park, K T; Pashankar, Dinesh S; Patel, Ashish S; Pineiro, Victor M; Samson, Charles M; Sandberg, Kelly C; Steiner, Steven J; Strople, Jennifer A; Sudel, Boris; Sullivan, Jillian S; Suskind, David L; Uppal, Vikas; Wali, Prateek D EGEMS (Washington, DC) 31646151 2019 Sep 30
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Holographic Reconstruction of Axonal Pathways in the Human Brain. Petersen, Mikkel V; Mlakar, Jeffrey; Haber, Suzanne N; Parent, Martin; Smith, Yoland; Strick, Peter L; Griswold, Mark A; McIntyre, Cameron C Neuron 31708306 2019 12 18
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Single-cell transcriptomic evidence for dense intracortical neuropeptide networks. Smith, Stephen J; Sümbül, Uygar; Graybuck, Lucas T; Collman, Forrest; Seshamani, Sharmishtaa; Gala, Rohan; Gliko, Olga; Elabbady, Leila; Miller, Jeremy A; Bakken, Trygve E; Rossier, Jean; Yao, Zizhen; Lein, Ed; Zeng, Hongkui; Tasic, Bosiljka; Hawrylycz, Michael eLife 31710287 2019 11 11
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Microfluidic continuous flow synthesis of functional hollow spherical silica with hierarchical sponge-like large porous shell. Hao, Nanjing; Nie, Yuan; Xu, Zhe; Closson, Andrew B; Usherwood, Thomas; J Zhang, John X Chemical engineering journal (Lausanne, Switzerland : 1996). 31762686 2019 Jun 15;
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Numerical observer study of lesion detectability for a long axial field-of-view whole-body PET imager using the PennPET Explorer. Viswanath, Varsha; Daube Witherspoon, Margaret E; Karp, Joel S; Surti, Suleman Physics in medicine and biology. 31816616 2020 Jan 24;
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Behavioral and neurobiological effects of GnRH agonist treatment in mice-potential implications for puberty suppression in transgender individuals. Anacker, Christoph; Sydnor, Ezra; Chen, Briana K; LaGamma, Christina C; McGowan, Josephine C; Mastrodonato, Alessia; Hunsberger, Holly C; Shores, Ryan; Dixon, Rushell S; McEwen, Bruce S; Byne, William; Meyer-Bahlburg, Heino F L; Bockting, Walter; Ehrhardt, Anke A; Denny, Christine A Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology. 32919399 2020 Sep 12;
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Deep learning based feature-level integration of multi-omics data for breast cancer patients survival analysis. Tong, Li; Mitchel, Jonathan; Chatlin, Kevin; Wang, May D BMC medical informatics and decision making 32933515 2020 09 15
Detection of SARS-CoV-2 with SHERLOCK One-Pot Testing. Joung, Julia; Ladha, Alim; Saito, Makoto; Kim, Nam-Gyun; Woolley, Ann E; Segel, Michael; Barretto, Robert P J; Ranu, Amardeep; Macrae, Rhiannon K; Faure, Guilhem; Ioannidi, Eleonora I; Krajeski, Rohan N; Bruneau, Robert; Huang, Meei-Li W; Yu, Xu G; Li, Jonathan Z; Walker, Bruce D; Hung, Deborah T; Greninger, Alexander L; Jerome, Keith R; Gootenberg, Jonathan S; Abudayyeh, Omar O; Zhang, Feng The New England journal of medicine. 32937062 2020 Sep 16;
Lipid-Bicelle-Coated Microfluidics for Intracellular Delivery with Reduced Fouling. Belling, Jason N; Heidenreich, Liv K; Park, Jae Hyeon; Kawakami, Lisa M; Takahashi, Jack; Frost, Isaura M; Gong, Yao; Young, Thomas D; Jackman, Joshua A; Jonas, Steven J; Cho, Nam-Joon; Weiss, Paul S ACS applied materials & interfaces. 32940030 2020 Oct 14;
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Total-Body Quantitative Parametric Imaging of Early Kinetics of 18F-FDG. Feng, Tao; Zhao, Yizhang; Shi, Hongcheng; Li, Hongdi; Zhang, Xuezhu; Wang, Guobao; Price, Patricia M; Badawi, Ramsey D; Cherry, Simon R; Jones, Terry Journal of nuclear medicine : official publication, Society of Nuclear Medicine 32948679 2021 05 10
A modification of γ-encoded RN symmetry pulses for increasing the scaling factor and more accurate measurements of the strong heteronuclear dipolar couplings. Nimerovsky, Evgeny; Soutar, Corinne P Journal of magnetic resonance (San Diego, Calif. : 1997) 32950918 2020 10
Venous Waveform Analysis Correlates With Echocardiography in Detecting Hypovolemia in a Rat Hemorrhage Model. Lefevre, Ryan J; Balzer, Claudius; Baudenbacher, Franz J; Riess, Matthias L; Hernandez, Antonio; Eagle, Susan S Seminars in cardiothoracic and vascular anesthesia 32957831 2021 Mar
Metagenomic sequencing of stool samples in Bangladeshi infants: virome association with poliovirus shedding after oral poliovirus vaccination. Tan, Susanna K; Granados, Andrea C; Bouquet, Jerome; Hoy-Schulz, Yana Emmy; Green, Lauri; Federman, Scot; Stryke, Doug; Haggerty, Thomas D; Ley, Catherine; Yeh, Ming-Te; Jannat, Kaniz; Maldonado, Yvonne A; Andino, Raul; Parsonnet, Julie; Chiu, Charles Y Scientific reports 32958861 2020 09 21
SPARCL1 Promotes Excitatory But Not Inhibitory Synapse Formation and Function Independent of Neurexins and Neuroligins. Gan, Kathlyn J; Südhof, Thomas C The Journal of neuroscience : the official journal of the Society for Neuroscience. 32973045 2020 Oct 14;
A set of experimentally validated, mutually orthogonal primers for combinatorially specifying genetic components. Subramanian, Subu K; Russ, William P; Ranganathan, Rama Synthetic biology (Oxford, England) 32995509 2018
Membrane surface recognition by the ASAP1 PH domain and consequences for interactions with the small GTPase Arf1. Soubias, Olivier; Pant, Shashank; Heinrich, Frank; Zhang, Yue; Roy, Neeladri Sekhar; Li, Jess; Jian, Xiaoying; Yohe, Marielle E; Randazzo, Paul A; Lösche, Mathias; Tajkhorshid, Emad; Byrd, R Andrew Science advances. 32998886 2020 Sep;
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COVID-19 is an emergent disease of aging. Santesmasses, Didac; Castro, José Pedro; Zenin, Aleksandr A; Shindyapina, Anastasia V; Gerashchenko, Maxim V; Zhang, Bohan; Kerepesi, Csaba; Yim, Sun Hee; Fedichev, Peter O; Gladyshev, Vadim N Aging cell. 33006233 2020 Oct 01;
Performance Evaluation of the uEXPLORER Total-Body PET/CT Scanner Based on NEMA NU 2-2018 with Additional Tests to Characterize PET Scanners with a Long Axial Field of View. Spencer, Benjamin A; Berg, Eric; Schmall, Jeffrey P; Omidvari, Negar; Leung, Edwin K; Abdelhafez, Yasser G; Tang, Songsong; Deng, Zilin; Dong, Yun; Lv, Yang; Bao, Jun; Liu, Weiping; Li, Hongdi; Jones, Terry; Badawi, Ramsey D; Cherry, Simon R Journal of nuclear medicine : official publication, Society of Nuclear Medicine 33008932 2021 06 01
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BRAFV 600E or mutant MAP2K1 human CD34+ cells establish Langerhans cell-like histiocytosis in immune-deficient mice. Rafiei, Anahita; Wilk, C Matthias; Helbling, Patrick M; Myburgh, Renier; Saito, Yasuyuki; Haralambieva, Eugenia; Soldini, Davide; Chakraborty, Rikhia; Merad, Miriam; Allen, Carl E; Nombela-Arrieta, Cesar; Manz, Markus G Blood advances. 33035332 2020 Oct 13;
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PRIME Cells Predicting Rheumatoid Arthritis Flares. Reply. Orange, Dana E; Darnell, Robert B The New England journal of medicine 33053295 2020 10 15
Usefulness of Elevated Troponin to Predict Death in Patients With COVID-19 and Myocardial Injury. Majure, David T; Gruberg, Luis; Saba, Shahryar G; Kvasnovsky, Charlotte; Hirsch, Jamie S; Jauhar, Rajiv; Northwell Health COVID-19 Research Consortium The American journal of cardiology. 33058800 2020 Oct 13;
Identifying Novel Susceptibility Genes for Colorectal Cancer Risk From a Transcriptome-Wide Association Study of 125,478 Subjects. Guo, Xingyi; Lin, Weiqiang; Wen, Wanqing; Huyghe, Jeroen; Bien, Stephanie; Cai, Qiuyin; Harrison, Tabitha; Chen, Zhishan; Qu, Conghui; Bao, Jiandong; Long, Jirong; Yuan, Yuan; Wang, Fangqin; Bai, Mengqiu; Abecasis, Goncalo R; Albanes, Demetrius; Berndt, Sonja I; Bézieau, Stéphane; Bishop, D Timothy; Brenner, Hermann; Buch, Stephan; Burnett-Hartman, Andrea; Campbell, Peter T; Castellví-Bel, Sergi; Chan, Andrew T; Chang-Claude, Jenny; Chanock, Stephen J; Cho, Sang Hee; Conti, David V; Chapelle, Albert de la; Feskens, Edith J M; Gallinger, Steven J; Giles, Graham G; Goodman, Phyllis J; Gsur, Andrea; Guinter, Mark; Gunter, Marc J; Hampe, Jochen; Hampel, Heather; Hayes, Richard B; Hoffmeister, Michael; Kampman, Ellen; Kang, Hyun Min; Keku, Temitope O; Kim, Hyeong Rok; Le Marchand, Loic; Lee, Soo Chin; Li, Christopher I; Li, Li; Lindblom, Annika; Lindor, Noralane; Milne, Roger L; Moreno, Victor; Murphy, Neil; Newcomb, Polly A; Nickerson, Deborah A; Offit, Kenneth; Pearlman, Rachel; Pharoah, Paul D P; Platz, Elizabeth A; Potter, John D; Rennert, Gad; Sakoda, Lori C; Schafmayer, Clemens; Schmit, Stephanie L; Schoen, Robert E; Schumacher, Fredrick R; Slattery, Martha L; Su, Yu-Ru; Tangen, Catherine M; Ulrich, Cornelia M; van Duijnhoven, Franzel J B; Van Guelpen, Bethany; Visvanathan, Kala; Vodicka, Pavel; Vodickova, Ludmila; Vymetalkova, Veronika; Wang, Xiaoliang; White, Emily; Wolk, Alicja; Woods, Michael O; Casey, Graham; Hsu, Li; Jenkins, Mark A; Gruber, Stephen B; Peters, Ulrike; Zheng, Wei Gastroenterology 33058866 2021 Mar
Single-shot stereo-polarimetric compressed ultrafast photography for light-speed observation of high-dimensional optical transients with picosecond resolution. Liang, Jinyang; Wang, Peng; Zhu, Liren; Wang, Lihong V Nature communications. 33067438 2020 10 16;
Poloxamer 188 Protects Isolated Adult Mouse Cardiomyocytes from Reoxygenation Injury. Salzman, Michele M; Bartos, Jason A; Yannopoulos, Demetris; Riess, Matthias L Pharmacology research & perspectives. 33073927 2020 Dec;
Proteins for increased surface expression of the ?6?4 nicotinic acetylcholine receptor: nothing but good news? Grant, Stephen; Lester, Henry A The Journal of clinical investigation. 33074245 2020 Nov 02;
Exome sequencing implicates genetic disruption of prenatal neuro-gliogenesis in sporadic congenital hydrocephalus. Jin, Sheng Chih; Dong, Weilai; Kundishora, Adam J; Panchagnula, Shreyas; Moreno-De-Luca, Andres; Furey, Charuta G; Allocco, August A; Walker, Rebecca L; Nelson-Williams, Carol; Smith, Hannah; Dunbar, Ashley; Conine, Sierra; Lu, Qiongshi; Zeng, Xue; Sierant, Michael C; Knight, James R; Sullivan, William; Duy, Phan Q; DeSpenza, Tyrone; Reeves, Benjamin C; Karimy, Jason K; Marlier, Arnaud; Castaldi, Christopher; Tikhonova, Irina R; Li, Boyang; Peña, Helena Perez; Broach, James R; Kabachelor, Edith M; Ssenyonga, Peter; Hehnly, Christine; Ge, Li; Keren, Boris; Timberlake, Andrew T; Goto, June; Mangano, Francesco T; Johnston, James M; Butler, William E; Warf, Benjamin C; Smith, Edward R; Schiff, Steven J; Limbrick Jr, David D; Heuer, Gregory; Jackson, Eric M; Iskandar, Bermans J; Mane, Shrikant; Haider, Shozeb; Guclu, Bulent; Bayri, Yasar; Sahin, Yener; Duncan, Charles C; Apuzzo, Michael L J; DiLuna, Michael L; Hoffman, Ellen J; Sestan, Nenad; Ment, Laura R; Alper, Seth L; Bilguvar, Kaya; Geschwind, Daniel H; Günel, Murat; Lifton, Richard P; Kahle, Kristopher T Nature medicine. 33077954 2020 11;
RNA timestamps identify the age of single molecules in RNA sequencing. Rodriques, Samuel G; Chen, Linlin M; Liu, Sophia; Zhong, Ellen D; Scherrer, Joseph R; Boyden, Edward S; Chen, Fei Nature biotechnology 33077959 2021 03
Organophosphorus flame retardants are developmental neurotoxicants in a rat primary brainsphere in vitro model. Hogberg, Helena T; de Cássia da Silveira E Sá, Rita; Kleensang, Andre; Bouhifd, Mounir; Cemiloglu Ulker, Ozge; Smirnova, Lena; Behl, Mamta; Maertens, Alexandra; Zhao, Liang; Hartung, Thomas Archives of toxicology 33078273 2021 01
The Problem of Microbial Dark Matter in Neonatal Sepsis. Sinnar, Shamim A; Schiff, Steven J Emerging infectious diseases 33080169 2020 11
Flexible Multiplexed In2O3 Nanoribbon Aptamer-Field-Effect Transistors for Biosensing. Liu, Qingzhou; Zhao, Chuanzhen; Chen, Mingrui; Liu, Yihang; Zhao, Zhiyuan; Wu, Fanqi; Li, Zhen; Weiss, Paul S; Andrews, Anne M; Zhou, Chongwu iScience. 33083757 2020 Sep 25;
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Electrochemical Reduction and Oxidation of Eight Unnatural 2'-Deoxynucleosides at a Pyrolytic Graphite Electrode. ?pa?ek, Jan; Karalkar, Nilesh; Fojta, Miroslav; Wang, Joseph; Benner, Steven A Electrochimica acta. 33087943 2020 Dec 01;
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Label-free imaging of lipid-rich biological tissues by mid-infrared photoacoustic microscopy. He, Yun; Shi, Junhui; Pleitez, Miguel A; Maslov, Konstantin; Wagenaar, Daniel A; Wang, Lihong V Journal of biomedical optics. 33118344 2020 Oct;
BMI as a Risk Factor for Clinical Outcomes in Patients Hospitalized with COVID-19 in New York. Kim, Tara S; Roslin, Mitchell; Wang, Jason J; Kane, Jamie; Hirsch, Jamie S; Kim, Eun Ji; Northwell Health COVID-19 Research Consortium Obesity (Silver Spring, Md.) 33128848 2021 02
Transcranial photoacoustic computed tomography based on a layered back-projection method. Na, Shuai; Yuan, Xiaoyun; Lin, Li; Isla, Julio; Garrett, David; Wang, Lihong V Photoacoustics. 33134081 2020 Dec;
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MyD88/CD40 signaling retains CAR T cells in a less differentiated state. Prinzing, Brooke; Schreiner, Patrick; Bell, Matthew; Fan, Yiping; Krenciute, Giedre; Gottschalk, Stephen JCI insight. 33148882 2020 Nov 05;
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A 3D culture platform enables development of zinc-binding prodrugs for targeted proliferation of ? cells. Yang, Kisuk; Lee, Miseon; Jones, Peter Anthony; Liu, Sophie S; Zhou, Angela; Xu, Jun; Sreekanth, Vedagopuram; Wu, Jamie L Y; Vo, Lillian; Lee, Eunjee A; Pop, Ramona; Lee, Yuhan; Wagner, Bridget K; Melton, Douglas A; Choudhary, Amit; Karp, Jeffrey M Science advances. 33208361 2020 Nov;
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Tracking and predicting the African COVID-19 pandemic. Ssentongo, Paddy; Fronterre, Claudio; Geronimo, Andrew; Greybush, Steven J; Mbabazi, Pamela K; Muvawala, Joseph; Nahalamba, Sarah B; Omadi, Philip O; Opar, Bernard T; Sinnar, Shamim A; Wang, Yan; Whalen, Andrew J; Held, Leonhard; Jewell, Chris; Muwanguzi, Abraham J B; Greatrex, Helen; Norton, Michael M; Diggle, Peter; Schiff, Steven J medRxiv : the preprint server for health sciences. 33236036 2020 Nov 16;
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In vivo Perturb-Seq reveals neuronal and glial abnormalities associated with autism risk genes. Jin, Xin; Simmons, Sean K; Guo, Amy; Shetty, Ashwin S; Ko, Michelle; Nguyen, Lan; Jokhi, Vahbiz; Robinson, Elise; Oyler, Paul; Curry, Nathan; Deangeli, Giulio; Lodato, Simona; Levin, Joshua Z; Regev, Aviv; Zhang, Feng; Arlotta, Paola Science (New York, N.Y.). 33243861 2020 11 27;
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An inducible CRISPR interference library for genetic interrogation of Saccharomyces cerevisiae biology. Momen-Roknabadi, Amir; Oikonomou, Panos; Zegans, Maxwell; Tavazoie, Saeed Communications biology. 33247197 2020 Nov 27;
Hydrogen-deuterium exchange mass spectrometry captures distinct dynamics upon substrate and inhibitor binding to a transporter. Jia, Ruyu; Martens, Chloe; Shekhar, Mrinal; Pant, Shashank; Pellowe, Grant A; Lau, Andy M; Findlay, Heather E; Harris, Nicola J; Tajkhorshid, Emad; Booth, Paula J; Politis, Argyris Nature communications. 33268777 2020 12 02;
Reprogramming to recover youthful epigenetic information and restore vision. Lu, Yuancheng; Brommer, Benedikt; Tian, Xiao; Krishnan, Anitha; Meer, Margarita; Wang, Chen; Vera, Daniel L; Zeng, Qiurui; Yu, Doudou; Bonkowski, Michael S; Yang, Jae-Hyun; Zhou, Songlin; Hoffmann, Emma M; Karg, Margarete M; Schultz, Michael B; Kane, Alice E; Davidsohn, Noah; Korobkina, Ekaterina; Chwalek, Karolina; Rajman, Luis A; Church, George M; Hochedlinger, Konrad; Gladyshev, Vadim N; Horvath, Steve; Levine, Morgan E; Gregory-Ksander, Meredith S; Ksander, Bruce R; He, Zhigang; Sinclair, David A Nature. 33268865 2020 12;
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Estimating the predictive value of negative severe acute respiratory coronavirus virus 2 (SARS-CoV-2) results: A prospective study. Hirschwerk, David; Foley, Mathew; Lesser, Martin; Farber, Bruce; Crawford, James M; Davidson, Karina W; Berry, Gregory J; Smith, Elizabeth; Kast, Charles; Volel, Vladimir; McGinn, Thomas Infection control and hospital epidemiology 33298203 2020 Dec 10
Let Sleeping Patients Lie, avoiding unnecessary overnight vitals monitoring using a clinically based deep-learning model. Tóth, Viktor; Meytlis, Marsha; Barnaby, Douglas P; Bock, Kevin R; Oppenheim, Michael I; Al-Abed, Yousef; McGinn, Thomas; Davidson, Karina W; Becker, Lance B; Hirsch, Jamie S; Zanos, Theodoros P NPJ digital medicine 33299116 2020 Nov 13
In vitro generation of self-renewing human intestinal epithelia over planar and shaped collagen hydrogels. Hinman, Samuel S; Wang, Yuli; Kim, Raehyun; Allbritton, Nancy L Nature protocols. 33299154 2020 Dec 09;
Imaging and optogenetic modulation of vascular mural cells in the live brain. Tong, Lei; Hill, Robert A; Damisah, Eyiyemisi C; Murray, Katie N; Yuan, Peng; Bordey, Angelique; Grutzendler, Jaime Nature protocols 33299155 2021 01
The integrated stress response mediates necrosis in murine Mycobacterium tuberculosis granulomas. Bhattacharya, Bidisha; Xiao, Shiqi; Chatterjee, Sujoy; Urbanowski, Michael; Ordonez, Alvaro; Ihms, Elizabeth A; Agrahari, Garima; Lun, Shichun; Berland, Robert; Pichugin, Alexander; Gao, Yuanwei; Connor, John; Ivanov, Alexander R; Yan, Bo-Shiun; Kobzik, Lester; Koo, Bang-Bon; Jain, Sanjay; Bishai, William; Kramnik, Igor The Journal of clinical investigation 33301427 2021 Feb 01
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Narrower Nanoribbon Biosensors Fabricated by Chemical Lift-off Lithography Show Higher Sensitivity. Zhao, Chuanzhen; Liu, Qingzhou; Cheung, Kevin M; Liu, Wenfei; Yang, Qing; Xu, Xiaobin; Man, Tianxing; Weiss, Paul S; Zhou, Chongwu; Andrews, Anne M ACS nano 33337135 2021 01 26
Quantitative PET in the 2020s: a roadmap. Meikle, Steven R; Sossi, Vesna; Roncali, Emilie; Cherry, Simon R; Banati, Richard; Mankoff, David; Jones, Terry; James, Michelle; Sutcliffe, Julie; Ouyang, Jinsong; Petibon, Yoann; Ma, Chao; El Fakhri, Georges; Surti, Suleman; Karp, Joel S; Badawi, Ramsey D; Yamaya, Taiga; Akamatsu, Go; Schramm, Georg; Rezaei, Ahmadreza; Nuyts, Johan; Fulton, Roger; Kyme, André; Lois, Cristina; Sari, Hasan; Price, Julie; Boellaard, Ronald; Jeraj, Robert; Bailey, Dale L; Eslick, Enid; Willowson, Kathy P; Dutta, Joyita Physics in medicine and biology 33339012 2021 03 12
BRICseq Bridges Brain-wide Interregional Connectivity to Neural Activity and Gene Expression in Single Animals. Huang, Longwen; Kebschull, Justus M; Fürth, Daniel; Musall, Simon; Kaufman, Matthew T; Churchland, Anne K; Zador, Anthony M Cell 33357401 2020 Dec 23
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Cell-free DNA (cfDNA) and Exosome Profiling from a Year-Long Human Spaceflight Reveals Circulating Biomarkers. Bezdan, Daniela; Grigorev, Kirill; Meydan, Cem; Pelissier Vatter, Fanny A; Cioffi, Michele; Rao, Varsha; MacKay, Matthew; Nakahira, Kiichi; Burnham, Philip; Afshinnekoo, Ebrahim; Westover, Craig; Butler, Daniel; Mozsary, Chris; Donahoe, Timothy; Foox, Jonathan; Mishra, Tejaswini; Lucotti, Serena; Rana, Brinda K; Melnick, Ari M; Zhang, Haiying; Matei, Irina; Kelsen, David; Yu, Kenneth; Lyden, David C; Taylor, Lynn; Bailey, Susan M; Snyder, Michael P; Garrett-Bakelman, Francine E; Ossowski, Stephan; De Vlaminck, Iwijn; Mason, Christopher E iScience 33376973 2020 Dec 18
Flexible Piezoelectric Nanogenerators Using Metal-doped ZnO-PVDF Films. Jin, Congran; Hao, Nanjing; Xu, Zhe; Trase, Ian; Nie, Yuan; Dong, Lin; Closson, Andrew; Chen, Zi; Zhang, John X J Sensors and actuators. A, Physical 33380776 2020 Apr 15
Flexible Electrostatic Transducer Array with Displacement Control for Haptic Sensing and Actuation. Trase, Ian; Tan, Hong Z; Chen, Zi; Zhang, John X J Sensors and actuators. A, Physical 33380777 2021 Jan 01
In situ genome sequencing resolves DNA sequence and structure in intact biological samples. Payne, Andrew C; Chiang, Zachary D; Reginato, Paul L; Mangiameli, Sarah M; Murray, Evan M; Yao, Chun-Chen; Markoulaki, Styliani; Earl, Andrew S; Labade, Ajay S; Jaenisch, Rudolf; Church, George M; Boyden, Edward S; Buenrostro, Jason D; Chen, Fei Science (New York, N.Y.) 33384301 2021 02 26
Genetic screening for single-cell variability modulators driving therapy resistance. Torre, Eduardo A; Arai, Eri; Bayatpour, Sareh; Jiang, Connie L; Beck, Lauren E; Emert, Benjamin L; Shaffer, Sydney M; Mellis, Ian A; Fane, Mitchell E; Alicea, Gretchen M; Budinich, Krista A; Weeraratna, Ashani T; Shi, Junwei; Raj, Arjun Nature genetics 33398196 2021 01
Divalent Cation Dependence Enhances Dopamine Aptamer Biosensing. Nakatsuka, Nako; Abendroth, John M; Yang, Kyung-Ae; Andrews, Anne M ACS applied materials & interfaces 33410656 2021 Mar 03
Multiple signaling pathways are essential for synapse formation induced by synaptic adhesion molecules. Jiang, Xian; Sando, Richard; Südhof, Thomas C Proceedings of the National Academy of Sciences of the United States of America 33431662 2021 01 19
Deciphering molecular interactions by proximity labeling. Qin, Wei; Cho, Kelvin F; Cavanagh, Peter E; Ting, Alice Y Nature methods 33432242 2021 02
Implantable Cardiac Kirigami-Inspired Lead-Based Energy Harvester Fabricated by Enhanced Piezoelectric Composite Film. Xu, Zhe; Jin, Congran; Cabe, Andrew; Escobedo, Danny; Gruslova, Aleksandra; Jenney, Scott; Closson, Andrew B; Dong, Lin; Chen, Zi; Feldman, Marc D; Zhang, John X J Advanced healthcare materials 33434407 2021 04
Microfluidic capillary networks are more sensitive than ektacytometry to the decline of red blood cell deformability induced by storage. Piety, Nathaniel Z; Stutz, Julianne; Yilmaz, Nida; Xia, Hui; Yoshida, Tatsuro; Shevkoplyas, Sergey S Scientific reports 33436749 2021 Jan 12
An early experience on the effect of solid organ transplant status on hospitalized COVID-19 patients. Nair, Vinay; Jandovitz, Nicholas; Hirsch, Jamie S; Abate, Mersema; Satapathy, Sanjaya K; Roth, Nitzan; Miyara, Santiago J; Guevara, Sara; Kressel, Adam M; Xiang, Alec; Wu, Grace; Butensky, Samuel D; Lin, David; Williams, Stephanie; Bhaskaran, Madhu C; Majure, David T; Grodstein, Elliot; Lau, Lawrence; Nair, Gayatri; Fahmy, Ahmed E; Winnick, Aaron; Breslin, Nadine; Berlinrut, Ilan; Molmenti, Christine; Becker, Lance B; Malhotra, Prashant; Gautam-Goyal, Pranisha; Lima, Brian; Maybaum, Simon; Shah, Samit K; Takegawa, Ryosuke; Hayashida, Kei; Shinozaki, Koichiro; Teperman, Lewis W; Molmenti, Ernesto P; Northwell Health COVID-19 Research Consortium American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons 33443778 2021 07
Integration of Multitargeted Polymer-Based Contrast Agents with Photoacoustic Computed Tomography: An Imaging Technique to Visualize Breast Cancer Intratumor Heterogeneity. Li, Lei; Patil, Deepanjali; Petruncio, Greg; Harnden, Kathleen K; Somasekharan, Jisha V; Paige, Mikell; Wang, Lihong V; Salvador-Morales, Carolina ACS nano 33464827 2021 02 23
Prevalence and Predictors of Venous Thromboembolism or Mortality in Hospitalized COVID-19 Patients. Cohen, Stuart L; Gianos, Eugenia; Barish, Mathew A; Chatterjee, Saurav; Kohn, Nina; Lesser, Martin; Giannis, Dimitrios; Coppa, Kevin; Hirsch, Jamie S; McGinn, Thomas G; Goldin, Mark E; Spyropoulos, Alex C; Northwell Health COVID-19 Research Consortium Thrombosis and haemostasis 33472255 2021 Aug
A Machine Learning Prediction Model of Respiratory Failure Within 48 Hours of Patient Admission for COVID-19: Model Development and Validation. Bolourani, Siavash; Brenner, Max; Wang, Ping; McGinn, Thomas; Hirsch, Jamie S; Barnaby, Douglas; Zanos, Theodoros P; Northwell COVID-19 Research Consortium Journal of medical Internet research 33476281 2021 02 10
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Potential Effects of Poloxamer 188 on Rat Isolated Brain Mitochondria after Oxidative Stress In Vivo and In Vitro. Pille, Johannes A; Riess, Matthias L Brain sciences 33477541 2021 Jan 18
A host metabolite promotes Salmonella survival. Lynch, Jason P; Lesser, Cammie F Science (New York, N.Y.) 33479138 2021 01 22
Pharmacological and genetic perturbation establish SIRT5 as a promising target in breast cancer. Abril, Yashira L Negrón; Fernandez, Irma R; Hong, Jun Young; Chiang, Ying-Ling; Kutateladze, Dennis A; Zhao, Qingjie; Yang, Min; Hu, Jing; Sadhukhan, Sushabhan; Li, Bo; He, Bin; Remick, Brenna; Bai, Jessica Jingyi; Mullmann, James; Wang, Fangyu; Maymi, Viviana; Dhawan, Ravi; Auwerx, Johan; Southard, Teresa; Cerione, Richard A; Lin, Hening; Weiss, Robert S Oncogene 33479498 2021 Jan 21
Basophils add fuel to the flame of eczema itch. Mali, Sonali S; Bautista, Diana M Cell 33482094 2021 01 21
Intercellular Communication in the Nervous System Goes Viral. Hantak, Michael P; Einstein, Jenifer; Kearns, Rachel B; Shepherd, Jason D Trends in neurosciences 33485691 2021 Apr
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Expansion sequencing: Spatially precise in situ transcriptomics in intact biological systems. Alon, Shahar; Goodwin, Daniel R; Sinha, Anubhav; Wassie, Asmamaw T; Chen, Fei; Daugharthy, Evan R; Bando, Yosuke; Kajita, Atsushi; Xue, Andrew G; Marrett, Karl; Prior, Robert; Cui, Yi; Payne, Andrew C; Yao, Chun-Chen; Suk, Ho-Jun; Wang, Ru; Yu, Chih-Chieh Jay; Tillberg, Paul; Reginato, Paul; Pak, Nikita; Liu, Songlei; Punthambaker, Sukanya; Iyer, Eswar P R; Kohman, Richie E; Miller, Jeremy A; Lein, Ed S; Lako, Ana; Cullen, Nicole; Rodig, Scott; Helvie, Karla; Abravanel, Daniel L; Wagle, Nikhil; Johnson, Bruce E; Klughammer, Johanna; Slyper, Michal; Waldman, Julia; Jané-Valbuena, Judit; Rozenblatt-Rosen, Orit; Regev, Aviv; IMAXT Consortium; Church, George M; Marblestone, Adam H; Boyden, Edward S Science (New York, N.Y.) 33509999 2021 01 29
Skin-resident natural killer T cells participate in cutaneous allergic inflammation in atopic dermatitis. Sun, ZhengWang; Kim, Ji Hye; Kim, Seo Hyeong; Kim, Hye Ran; Zhang, KeLun; Pan, Youdong; Ko, Min Kyung; Kim, Bo Mi; Chu, Howard; Lee, Hee Ra; Kim, Hye Li; Kim, Ji Hyung; Fu, Xiujun; Hyun, Young-Min; Yun, Ki Na; Kim, Jin Young; Lee, Dong Won; Song, Seung Yong; Lin, Charles P; Clark, Rachael A; Lee, Kwang Hoon; Kupper, Thomas S; Park, Chang Ook The Journal of allergy and clinical immunology 33516870 2021 Jan 28
Pathogenic LMNA variants disrupt cardiac lamina-chromatin interactions and de-repress alternative fate genes. Shah, Parisha P; Lv, Wenjian; Rhoades, Joshua H; Poleshko, Andrey; Abbey, Deepti; Caporizzo, Matthew A; Linares-Saldana, Ricardo; Heffler, Julie G; Sayed, Nazish; Thomas, Dilip; Wang, Qiaohong; Stanton, Liam J; Bedi, Kenneth; Morley, Michael P; Cappola, Thomas P; Owens, Anjali T; Margulies, Kenneth B; Frank, David B; Wu, Joseph C; Rader, Daniel J; Yang, Wenli; Prosser, Benjamin L; Musunuru, Kiran; Jain, Rajan Cell stem cell 33529599 2021 Jan 26
A diagnostic host response biosignature for COVID-19 from RNA profiling of nasal swabs and blood. Ng, Dianna L; Granados, Andrea C; Santos, Yale A; Servellita, Venice; Goldgof, Gregory M; Meydan, Cem; Sotomayor-Gonzalez, Alicia; Levine, Andrew G; Balcerek, Joanna; Han, Lucy M; Akagi, Naomi; Truong, Kent; Neumann, Neil M; Nguyen, David N; Bapat, Sagar P; Cheng, Jing; Martin, Claudia Sanchez-San; Federman, Scot; Foox, Jonathan; Gopez, Allan; Li, Tony; Chan, Ray; Chu, Cynthia S; Wabl, Chiara A; Gliwa, Amelia S; Reyes, Kevin; Pan, Chao-Yang; Guevara, Hugo; Wadford, Debra; Miller, Steve; Mason, Christopher E; Chiu, Charles Y Science advances 33536218 2021 02
The evolution of red color vision is linked to coordinated rhodopsin tuning in lycaenid butterflies. Liénard, Marjorie A; Bernard, Gary D; Allen, Andrew; Lassance, Jean-Marc; Song, Siliang; Childers, Richard Rabideau; Yu, Nanfang; Ye, Dajia; Stephenson, Adriana; Valencia-Montoya, Wendy A; Salzman, Shayla; Whitaker, Melissa R L; Calonje, Michael; Zhang, Feng; Pierce, Naomi E Proceedings of the National Academy of Sciences of the United States of America 33547236 2021 Feb 09
Examination of patient characteristics and hydroxychloroquine use based on the US Food and Drug Administration's recommendation: a cross-sectional analysis in New York. Kim, Eun Ji; Coppa, Kevin; Hirsch, Jamie S; Abrahams, Sara; Johnson, Jennifer; Lesser, Martin; Davidson, Karina W; Conigliaro, Joseph; Northwell Health COVID-19 Research Consortium; Northwell Health COVID-19 Research Consortium BMJ open 33558355 2021 02 08
Severity of liver test abnormalities in coronavirus disease 2019 depends on comorbidities and predicts early in-hospital mortality. Satapathy, Sanjaya K; Kuntzen, Christian; Qiu, He; Jiang, Yu; Bodenheimer, Henry C; Roth, Nitzan C; Lee, Tai-Ping; Hirsch, Jamie S; Trindade, Arvind J; Bernstein, David E; Northwell Health COVID-19 Research Consortium European journal of gastroenterology & hepatology 33560687 2021 Feb 05
High-speed three-dimensional photoacoustic computed tomography for preclinical research and clinical translation. Lin, Li; Hu, Peng; Tong, Xin; Na, Shuai; Cao, Rui; Yuan, Xiaoyun; Garrett, David C; Shi, Junhui; Maslov, Konstantin; Wang, Lihong V Nature communications 33563996 2021 02 09
Mechanism of gating and partial agonist action in the glycine receptor. Yu, Jie; Zhu, Hongtao; Lape, Remigijus; Greiner, Timo; Du, Juan; Lü, Wei; Sivilotti, Lucia; Gouaux, Eric Cell 33567265 2021 Feb 18
Exploiting Allosteric Properties of RAF and MEK Inhibitors to Target Therapy-Resistant Tumors Driven by Oncogenic BRAF Signaling. Adamopoulos, Christos; Ahmed, Tamer A; Tucker, Maxwell R; Ung, Peter M U; Xiao, Min; Karoulia, Zoi; Amabile, Angelo; Wu, Xuewei; Aaronson, Stuart A; Ang, Celina; Rebecca, Vito W; Brown, Brian D; Schlessinger, Avner; Herlyn, Meenhard; Wang, Qi; Shaw, David E; Poulikakos, Poulikos I Cancer discovery 33568355 2021 Jul
Experimental Designs to Optimize Treatments for Individuals: Personalized N-of-1 Trials. Davidson, Karina W; Silverstein, Michael; Cheung, Ken; Paluch, Rocco A; Epstein, Leonard H JAMA pediatrics 33587109 2021 Apr 01
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Fluoroethylnormemantine, A Novel Derivative of Memantine, Facilitates Extinction Learning Without Sensorimotor Deficits. Chen, Briana K; Le Pen, Gwenaëlle; Eckmier, Adam; Rubinstenn, Gilles; Jay, Therese M; Denny, Christine A The international journal of neuropsychopharmacology 33631001 2021 07 14
T cell circuits that sense antigen density with an ultrasensitive threshold. Hernandez-Lopez, Rogelio A; Yu, Wei; Cabral, Katelyn A; Creasey, Olivia A; Lopez Pazmino, Maria Del Pilar; Tonai, Yurie; De Guzman, Arsenia; Mäkelä, Anna; Saksela, Kalle; Gartner, Zev J; Lim, Wendell A Science (New York, N.Y.) 33632893 2021 03 12
Visualizing the dynamics of tuberculosis pathology using molecular imaging. Ordonez, Alvaro A; Tucker, Elizabeth W; Anderson, Carolyn J; Carter, Claire L; Ganatra, Shashank; Kaushal, Deepak; Kramnik, Igor; Lin, Philana L; Madigan, Cressida A; Mendez, Susana; Rao, Jianghong; Savic, Rada M; Tobin, David M; Walzl, Gerhard; Wilkinson, Robert J; Lacourciere, Karen A; Via, Laura E; Jain, Sanjay K The Journal of clinical investigation 33645551 2021 Mar 01
Pluripotent stem cell-derived models of neurological diseases reveal early transcriptional heterogeneity. Sorek, Matan; Oweis, Walaa; Nissim-Rafinia, Malka; Maman, Moria; Simon, Shahar; Hession, Cynthia C; Adiconis, Xian; Simmons, Sean K; Sanjana, Neville E; Shi, Xi; Lu, Congyi; Pan, Jen Q; Xu, Xiaohong; Pouladi, Mahmoud A; Ellerby, Lisa M; Zhang, Feng; Levin, Joshua Z; Meshorer, Eran Genome biology 33663567 2021 03 04
Altered Neuronal Support and Inflammatory Response in Bipolar Disorder Patient-Derived Astrocytes. Vadodaria, Krishna C; Mendes, Ana P D; Mei, Arianna; Racha, Vipula; Erikson, Galina; Shokhirev, Maxim N; Oefner, Ruth; Heard, Kelly J; McCarthy, Michael J; Eyler, Lisa; Kelsoe, John R; Santos, Renata; Marchetto, Maria C; Gage, Fred H Stem cell reports 33667413 2021 04 13
Selective axonal translation of the mRNA isoform encoding prenylated Cdc42 supports axon growth. Lee, Seung Joon; Zdradzinski, Matthew D; Sahoo, Pabitra K; Kar, Amar N; Patel, Priyanka; Kawaguchi, Riki; Aguilar, Byron J; Lantz, Kelsey D; McCain, Caylee R; Coppola, Giovanni; Lu, Qun; Twiss, Jeffery L Journal of cell science 33674450 2021 04 01
Binding mode of SARS-CoV-2 fusion peptide to human cellular membrane. Gorgun, Defne; Lihan, Muyun; Kapoor, Karan; Tajkhorshid, Emad Biophysical journal 33675757 2021 07 20
BARcode DEmixing through Non-negative Spatial Regression (BarDensr). Chen, Shuonan; Loper, Jackson; Chen, Xiaoyin; Vaughan, Alex; Zador, Anthony M; Paninski, Liam PLoS computational biology 33684106 2021 03
Giotto: a toolbox for integrative analysis and visualization of spatial expression data. Dries, Ruben; Zhu, Qian; Dong, Rui; Eng, Chee-Huat Linus; Li, Huipeng; Liu, Kan; Fu, Yuntian; Zhao, Tianxiao; Sarkar, Arpan; Bao, Feng; George, Rani E; Pierson, Nico; Cai, Long; Yuan, Guo-Cheng Genome biology 33685491 2021 Mar 08
Genome-wide investigation identifies a rare copy-number variant burden associated with human spina bifida. Wolujewicz, Paul; Aguiar-Pulido, Vanessa; AbdelAleem, Alice; Nair, Vidya; Thareja, Gaurav; Suhre, Karsten; Shaw, Gary M; Finnell, Richard H; Elemento, Olivier; Ross, M Elizabeth Genetics in medicine : official journal of the American College of Medical Genetics 33686259 2021 Jul
Lineage barcoding in mice with homing CRISPR. Leeper, Kathleen; Kalhor, Kian; Vernet, Andyna; Graveline, Amanda; Church, George M; Mali, Prashant; Kalhor, Reza Nature protocols 33692551 2021 Mar 10
Barcoded oligonucleotides ligated on RNA amplified for multiplexed and parallel in situ analyses. Liu, Songlei; Punthambaker, Sukanya; Iyer, Eswar P R; Ferrante, Thomas; Goodwin, Daniel; Fürth, Daniel; Pawlowski, Andrew C; Jindal, Kunal; Tam, Jenny M; Mifflin, Lauren; Alon, Shahar; Sinha, Anubhav; Wassie, Asmamaw T; Chen, Fei; Cheng, Anne; Willocq, Valerie; Meyer, Katharina; Ling, King-Hwa; Camplisson, Conor K; Kohman, Richie E; Aach, John; Lee, Je Hyuk; Yankner, Bruce A; Boyden, Edward S; Church, George M Nucleic acids research 33693773 2021 06 04
Plasmodium falciparum LipB mutants display altered redox and carbon metabolism in asexual stages and cannot complete sporogony in Anopheles mosquitoes. Biddau, Marco; Santha Kumar, T R; Henrich, Philipp; Laine, Larissa M; Blackburn, Gavin J; Chokkathukalam, Achuthanunni; Li, Tao; Lee Sim, Kim; King, Lewis; Hoffman, Stephen L; Barrett, Michael P; Coombs, Graham H; McFadden, Geoffrey I; Fidock, David A; Müller, Sylke; Sheiner, Lilach International journal for parasitology 33713652 2021 May
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Prevalence and determinants of cervical cancer screening in five sub-Saharan African countries: A population-based study. Ba, Djibril M; Ssentongo, Paddy; Musa, Jonah; Agbese, Edeanya; Diakite, Brehima; Traore, Cheick Bougadari; Wang, Steve; Maiga, Mamoudou Cancer epidemiology 33756434 2021 06
PET Parametric Imaging: Past, Present, and Future. Wang, Guobao; Rahmim, Arman; Gunn, Roger N IEEE transactions on radiation and plasma medical sciences 33763624 2020 Nov
Propranolol Decreases Fear Expression by Modulating Fear Memory Traces. Leal Santos, Sofia; Stackmann, Michelle; Muñoz Zamora, Andrea; Mastrodonato, Alessia; De Landri, Allegra V; Vaughan, Nick; Chen, Briana K; Lanio, Marcos; Denny, Christine A Biological psychiatry 33766406 2021 06 15
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Effectiveness of SARS-CoV-2 Decontamination and Containment in a COVID-19 ICU. Brune, Zarina; Kuschner, Cyrus E; Mootz, Joseph; Davidson, Karina W; Pena, Robert C F; Ghanem, Mustafa H; Fischer, Austin; Gitman, Michael; Teperman, Lewis; Mason, Christopher; Becker, Lance B International journal of environmental research and public health 33802332 2021 03 03
Risk factors and outcomes for acute-on-chronic liver failure in COVID-19: a large multi-center observational cohort study. Satapathy, Sanjaya K; Roth, Nitzan C; Kvasnovsky, Charlotte; Hirsch, Jamie S; Trindade, Arvind J; Molmenti, Ernesto; Barish, Matthew; Hirschwerk, David; Da, Ben L; Bernstein, David; Northwell Health COVID-19 Research Consortium Hepatology international 33826042 2021 Apr 07
Multifocal photoacoustic microscopy using a single-element ultrasonic transducer through an ergodic relay. Li, Yang; Wong, Terence T W; Shi, Junhui; Hsu, Hsun-Chia; Wang, Lihong V Light, science & applications 33828070 2020 Jul 31
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Imaging cell lineage with a synthetic digital recording system. Chow, Ke-Huan K; Budde, Mark W; Granados, Alejandro A; Cabrera, Maria; Yoon, Shinae; Cho, Soomin; Huang, Ting-Hao; Koulena, Noushin; Frieda, Kirsten L; Cai, Long; Lois, Carlos; Elowitz, Michael B Science (New York, N.Y.) 33833095 2021 04 09
Molecular tracking devices quantify antigen distribution and archiving in the murine lymph node. Walsh, Shannon M; Sheridan, Ryan M; Lucas, Erin D; Doan, Thu A; Ware, Brian C; Schafer, Johnathon; Fu, Rui; Burchill, Matthew A; Hesselberth, Jay R; Tamburini, Beth Ann Jiron eLife 33843587 2021 Apr 12
Shared B cell memory to coronaviruses and other pathogens varies in human age groups and tissues. Yang, Fan; Nielsen, Sandra C A; Hoh, Ramona A; Röltgen, Katharina; Wirz, Oliver Fabian; Haraguchi, Emily; Jean, Grace H; Lee, Ji-Yeun; Pham, Tho D; Jackson, Katherine J L; Roskin, Krishna M; Liu, Yi; Nguyen, Khoa; Ohgami, Robert S; Osborne, Eleanor M; Nadeau, Kari C; Niemann, Claus U; Parsonnet, Julie; Boyd, Scott D Science (New York, N.Y.) 33846272 2021 05 14
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Programmable protein circuit design. Chen, Zibo; Elowitz, Michael B Cell 33848464 2021 Apr 29
A Generalized Unscented Transformation for Probability Distributions. Ebeigbe, Donald; Berry, Tyrus; Norton, Michael M; Whalen, Andrew J; Simon, Dan; Sauer, Timothy; Schiff, Steven J ArXiv 33850954 2021 Apr 05
Imaging Enterobacterales infections in patients using pathogen-specific positron emission tomography. Ordonez, Alvaro A; Wintaco, Luz M; Mota, Filipa; Restrepo, Andres F; Ruiz-Bedoya, Camilo A; Reyes, Carlos F; Uribe, Luis G; Abhishek, Sudhanshu; D'Alessio, Franco R; Holt, Daniel P; Dannals, Robert F; Rowe, Steven P; Castillo, Victor R; Pomper, Martin G; Granados, Ulises; Jain, Sanjay K Science translational medicine 33853931 2021 04 14
Photoacoustic Computed Tomography of Breast Cancer in Response to Neoadjuvant Chemotherapy. Lin, Li; Tong, Xin; Hu, Peng; Invernizzi, Marta; Lai, Lily; Wang, Lihong V Advanced science (Weinheim, Baden-Wurttemberg, Germany) 33854889 2021 04
The Cortical Motor Areas and the Emergence of Motor Skills: A Neuroanatomical Perspective. Strick, Peter L; Dum, Richard P; Rathelot, Jean-Alban Annual review of neuroscience 33863253 2021 Apr 16
To eat, or not to eat, that is the question: Neural stem cells escape phagocytosis in autism with macrocephaly. Schafer, Simon T; Gage, Fred H Proceedings of the National Academy of Sciences of the United States of America 33883269 2021 May 11
Sex-Based Differences in COVID-19 Outcomes. Tejpal, Astha; Gianos, Eugenia; Cerise, Jane; Hirsch, Jamie S; Rosen, Stacey; Kohn, Nina; Lesser, Martin; Weinberg, Catherine; Majure, David; Satapathy, Sanjaya K; Bernstein, David; Barish, Matthew A; Spyropoulos, Alex C; Brown, Rachel-Maria Journal of women's health (2002) 33885345 2021 04
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MARCO+ lymphatic endothelial cells sequester arthritogenic alphaviruses to limit viremia and viral dissemination. Carpentier, Kathryn S; Sheridan, Ryan M; Lucas, Cormac J; Davenport, Bennett J; Li, Frances S; Lucas, Erin D; McCarthy, Mary K; Reynoso, Glennys V; May, Nicholas A; Tamburini, Beth A J; Hesselberth, Jay R; Hickman, Heather D; Morrison, Thomas E The EMBO journal 34618370 2021 Oct 07
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Gun violence incidence during the COVID-19 pandemic is higher than before the pandemic in the United States. Ssentongo, Paddy; Fronterre, Claudio; Ssentongo, Anna E; Advani, Shailesh; Heilbrunn, Emily S; Hazelton, Joshua P; Oh, John S; McCall-Hosenfeld, Jennifer S; Chinchilli, Vernon M Scientific reports 34675321 2021 10 21
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Simultaneous serotonin and dopamine monitoring across timescales by rapid pulse voltammetry with partial least squares regression. Movassaghi, Cameron S; Perrotta, Katie A; Yang, Hongyan; Iyer, Rahul; Cheng, Xinyi; Dagher, Merel; Fillol, Miguel Alcañiz; Andrews, Anne M Analytical and bioanalytical chemistry 34686897 2021 Nov
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Photothermal Intracellular Delivery Using Gold Nanodisk Arrays. Zhao, Chuanzhen; Man, Tianxing; Xu, Xiaobin; Yang, Qing; Liu, Wenfei; Jonas, Steven J; Teitell, Michael A; Chiou, Pei-Yu; Weiss, Paul S ACS materials letters 34708213 2020 Nov 02
Telemedicine and visit completion among people with HIV during the coronavirus disease 2019 pandemic compared with prepandemic. El-Nahal, Walid G; Shen, Nicola M; Keruly, Jeanne C; Jones, Joyce L; Fojo, Anthony T; Lau, Bryan; Manabe, Yukari C; Moore, Richard D; Gebo, Kelly A; Lesko, Catherine R; Chander, Geetanjali AIDS (London, England) 34711737 2022 03 01
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Enteric pathogens induce tissue tolerance and prevent neuronal loss from subsequent infections. Ahrends, Tomasz; Aydin, Begüm; Matheis, Fanny; Classon, Cajsa H; Marchildon, François; Furtado, Gláucia C; Lira, Sérgio A; Mucida, Daniel Cell 34717799 2021 Nov 11
Genetic re-direction of canine primary T cells for clinical trial use in pet dogs with spontaneous cancer. Rotolo, Antonia; Atherton, Matthew J; Kasper, Brian T; Haran, Kumudhini P; Mason, Nicola J STAR protocols 34746864 2021 12 17
Proximity-Labeling Reveals Novel Host and Parasite Proteins at the Toxoplasma Parasitophorous Vacuole Membrane. Cygan, Alicja M; Jean Beltran, Pierre M; Mendoza, Alma G; Branon, Tess C; Ting, Alice Y; Carr, Steven A; Boothroyd, John C mBio 34749525 2021 12 21
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Neurological pathophysiology of SARS-CoV-2 and pandemic potential RNA viruses: a comparative analysis. Chakravarty, Nikhil; Senthilnathan, Thrisha; Paiola, Sophia; Gyani, Priya; Castillo Cario, Sebastian; Urena, Estrella; Jeysankar, Akash; Jeysankar, Prakash; Ignatius Irudayam, Joseph; Natesan Subramanian, Sumathi; Lavretsky, Helen; Joshi, Shantanu; Garcia Jr, Gustavo; Ramaiah, Arunachalam; Arumugaswami, Vaithilingaraja FEBS letters 34757622 2021 Nov 10
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Emerging technologies and their impact on regulatory science. Anklam, Elke; Bahl, Martin Iain; Ball, Robert; Beger, Richard D; Cohen, Jonathan; Fitzpatrick, Suzanne; Girard, Philippe; Halamoda-Kenzaoui, Blanka; Hinton, Denise; Hirose, Akihiko; Hoeveler, Arnd; Honma, Masamitsu; Hugas, Marta; Ishida, Seichi; Kass, George En; Kojima, Hajime; Krefting, Ira; Liachenko, Serguei; Liu, Yan; Masters, Shane; Marx, Uwe; McCarthy, Timothy; Mercer, Tim; Patri, Anil; Pelaez, Carmen; Pirmohamed, Munir; Platz, Stefan; Ribeiro, Alexandre Js; Rodricks, Joseph V; Rusyn, Ivan; Salek, Reza M; Schoonjans, Reinhilde; Silva, Primal; Svendsen, Clive N; Sumner, Susan; Sung, Kyung; Tagle, Danilo; Tong, Li; Tong, Weida; Eijnden-van-Raaij, Janny van den; Vary, Neil; Wang, Tao; Waterton, John; Wang, May; Wen, Hairuo; Wishart, David; Yuan, Yinyin; Slikker Jr, William Experimental biology and medicine (Maywood, N.J.) 34783606 2022 01
Deleting DNMT3A in CAR T cells prevents exhaustion and enhances antitumor activity. Prinzing, Brooke; Zebley, Caitlin C; Petersen, Christopher T; Fan, Yiping; Anido, Alejandro Allo; Yi, Zhongzhen; Nguyen, Phuong; Houke, Haley; Bell, Matthew; Haydar, Dalia; Brown, Charmaine; Boi, Shannon K; Alli, Shanta; Crawford, Jeremy Chase; Riberdy, Janice M; Park, Jeoungeun J; Zhou, Sheng; Velasquez, Mireya Paulina; DeRenzo, Chris; Lazzarotto, Cicera R; Tsai, Shengdar Q; Vogel, Peter; Pruett-Miller, Shondra M; Langfitt, Deanna M; Gottschalk, Stephen; Youngblood, Ben; Krenciute, Giedre Science translational medicine 34788079 2021 Nov 17
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Transcription-wide mapping of dihydrouridine reveals that mRNA dihydrouridylation is required for meiotic chromosome segregation. Finet, Olivier; Yague-Sanz, Carlo; Krüger, Lara Katharina; Tran, Phong; Migeot, Valérie; Louski, Max; Nevers, Alicia; Rougemaille, Mathieu; Sun, Jingjing; Ernst, Felix G M; Wacheul, Ludivine; Wery, Maxime; Morillon, Antonin; Dedon, Peter; Lafontaine, Denis L J; Hermand, Damien Molecular cell 34798057 2021 Nov 15
Now is the time to assess the effects of open science practiceswith randomized control trials. Suls, Jerry; Rothman, Alexander J; Davidson, Karina W The American psychologist 34807632 2022 Apr
Cardiomyocytes disrupt pyrimidine biosynthesis in nonmyocytes to regulate heart repair. Li, Shen; Yokota, Tomohiro; Wang, Ping; Ten Hoeve, Johanna; Ma, Feiyang; Le, Thuc M; Abt, Evan R; Zhou, Yonggang; Wu, Rimao; Nanthavongdouangsy, Maxine; Rodriguez, Abraham; Wang, Yijie; Lin, Yen-Ju; Muranaka, Hayato; Sharpley, Mark; Braddock, Demetrios T; MacRae, Vicky E; Banerjee, Utpal; Chiou, Pei-Yu; Seldin, Marcus; Huang, Dian; Teitell, Michael; Gertsman, Ilya; Jung, Michael; Bensinger, Steven J; Damoiseaux, Robert; Faull, Kym; Pellegrini, Matteo; Lusis, Aldons J; Graeber, Thomas G; Radu, Caius G; Deb, Arjun The Journal of clinical investigation 34813507 2022 01 18
Implantable aptamer-field-effect transistor neuroprobes for in vivo neurotransmitter monitoring. Zhao, Chuanzhen; Cheung, Kevin M; Huang, I-Wen; Yang, Hongyan; Nakatsuka, Nako; Liu, Wenfei; Cao, Yan; Man, Tianxing; Weiss, Paul S; Monbouquette, Harold G; Andrews, Anne M Science advances 34818033 2021 Nov 26
ORAI1 Limits SARS-CoV-2 Infection by Regulating Tonic Type I IFN Signaling. Wu, Beibei; Ramaiah, Arunachalam; Garcia Jr, Gustavo; Hasiakos, Spyridon; Arumugaswami, Vaithilingaraja; Srikanth, Sonal Journal of immunology (Baltimore, Md. : 1950) 34819389 2022 Jan 01
Plasmonic Nanoparticle Conjugation for Nucleic Acid Biosensing. Tadimety, Amogha; Zhang, Yichen; Molinski, John H; Palinski, Timothy J; Tsongalis, Gregory J; Zhang, John X J Methods in molecular biology (Clifton, N.J.) 34837175 2022
Identification of a therapeutic interfering particle-A single-dose SARS-CoV-2 antiviral intervention with a high barrier to resistance. Chaturvedi, Sonali; Vasen, Gustavo; Pablo, Michael; Chen, Xinyue; Beutler, Nathan; Kumar, Arjun; Tanner, Elizabeth; Illouz, Sylvia; Rahgoshay, Donna; Burnett, John; Holguin, Leo; Chen, Pei-Yi; Ndjamen, Blaise; Ott, Melanie; Rodick, Robert; Rogers, Thomas; Cell 34838159 2021 12 09
In vivo visualization of butterfly scale cell morphogenesis in Vanessa cardui. McDougal, Anthony D; Kang, Sungsam; Yaqoob, Zahid; So, Peter T C; Kolle, Mathias Proceedings of the National Academy of Sciences of the United States of America 34845021 2021 12 07
Inorganic-Organic Interpenetrating Network Hydrogels as Tissue-Integrating Luminescent Implants: Physicochemical Characterization and Preclinical Evaluation. Unruh, Rachel M; Bornhoeft, Lindsey R; Nichols, Scott P; Wisniewski, Natalie A; McShane, Michael J Macromolecular bioscience 34847287 2022 Mar
Dynamic PET-facilitated modeling and high-dose rifampin regimens for Staphylococcus aureus orthopedic implant-associated infections. Gordon, Oren; Lee, Donald E; Liu, Bessie; Langevin, Brooke; Ordonez, Alvaro A; Dikeman, Dustin A; Shafiq, Babar; Thompson, John M; Sponseller, Paul D; Flavahan, Kelly; Lodge, Martin A; Rowe, Steven P; Dannals, Robert F; Ruiz-Bedoya, Camilo A; Read, Timothy D; Peloquin, Charles A; Archer, Nathan K; Miller, Lloyd S; Davis, Kimberly M; Gobburu, Jogarao V S; Jain, Sanjay K Science translational medicine 34851697 2021 Dec
Prostate Cancer Risk Stratification via Nondestructive 3D Pathology with Deep Learning-Assisted Gland Analysis. Xie, Weisi; Reder, Nicholas P; Koyuncu, Can; Leo, Patrick; Hawley, Sarah; Huang, Hongyi; Mao, Chenyi; Postupna, Nadia; Kang, Soyoung; Serafin, Robert; Gao, Gan; Han, Qinghua; Bishop, Kevin W; Barner, Lindsey A; Fu, Pingfu; Wright, Jonathan L; Keene, C Dirk; Vaughan, Joshua C; Janowczyk, Andrew; Glaser, Adam K; Madabhushi, Anant; True, Lawrence D; Liu, Jonathan T C Cancer research 34853071 2022 01 15
Complete Genome Sequence of Arachnia rubra Strain DSM 100122T, a Cultured Member of the Human Oral Microbiome. Ouellette, Matthew; Bejian, Andrew A; Chen, Tsute; Jones, Dakota S; Johnston, Christopher D; Dewhirst, Floyd E Microbiology resource announcements 34854708 2021 Dec 02
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Exercise plasma boosts memory and dampens brain inflammation via clusterin. De Miguel, Zurine; Khoury, Nathalie; Betley, Michael J; Lehallier, Benoit; Willoughby, Drew; Olsson, Niclas; Yang, Andrew C; Hahn, Oliver; Lu, Nannan; Vest, Ryan T; Bonanno, Liana N; Yerra, Lakshmi; Zhang, Lichao; Saw, Nay Lui; Fairchild, J Kaci; Lee, Davis; Zhang, Hui; McAlpine, Patrick L; Contrepois, Kévin; Shamloo, Mehrdad; Elias, Joshua E; Rando, Thomas A; Wyss-Coray, Tony Nature 34880498 2021 Dec
Fungicidal amphotericin B sponges are assemblies of staggered asymmetric homodimers encasing large void volumes. Lewandowska, Agnieszka; Soutar, Corinne P; Greenwood, Alexander I; Nimerovsky, Evgeny; De Lio, Ashley M; Holler, Jordan T; Hisao, Grant S; Khandelwal, Anuj; Zhang, Jiabao; SantaMaria, Anna M; Schwieters, Charles D; Pogorelov, Taras V; Burke, Martin D; Rienstra, Chad M Nature structural & molecular biology 34887566 2021 12
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Method for Inkjet-printing PEDOT:PSS polymer electrode arrays on piezoelectric PVDF-TrFE fibers. Closson, Andrew; Richards, Haley; Xu, Zhe; Jin, Congran; Dong, Lin; Zhang, John X J IEEE sensors journal 34899077 2021 Dec
Rapid directed molecular evolution of fluorescent proteins in mammalian cells. Babakhanova, Siranush; Jung, Erica E; Namikawa, Kazuhiko; Zhang, Hanbin; Wang, Yangdong; Subach, Oksana M; Korzhenevskiy, Dmitry A; Rakitina, Tatiana V; Xiao, Xian; Wang, Wenjing; Shi, Jing; Drobizhev, Mikhail; Park, Demian; Eisenhard, Lea; Tang, Hongyun; Köster, Reinhard W; Subach, Fedor V; Boyden, Edward S; Piatkevich, Kiryl D Protein science : a publication of the Protein Society 34913537 2022 03
Systems biology analysis of human genomes points to key pathways conferring spina bifida risk. Aguiar-Pulido, Vanessa; Wolujewicz, Paul; Martinez-Fundichely, Alexander; Elhaik, Eran; Thareja, Gaurav; Abdel Aleem, Alice; Chalhoub, Nader; Cuykendall, Tawny; Al-Zamer, Jamel; Lei, Yunping; El-Bashir, Haitham; Musser, James M; Al-Kaabi, Abdulla; Shaw, Gary M; Khurana, Ekta; Suhre, Karsten; Mason, Christopher E; Elemento, Olivier; Finnell, Richard H; Ross, M Elizabeth Proceedings of the National Academy of Sciences of the United States of America 34916285 2021 12 21
Molecular self-avoidance in synaptic neurexin complexes. Wang, Cosmos Yuqi; Trotter, Justin H; Liakath-Ali, Kif; Lee, Sung-Jin; Liu, Xinran; Südhof, Thomas C Science advances 34919427 2021 Dec 17
Citrobacter rodentium(ϕStx2dact), a murine infection model for enterohemorrhagic Escherichia coli. Thorpe, Cheleste M; Pulsifer, Amanda R; Osburne, Marcia S; Vanaja, Sivapriya Kailasan; Leong, John M Current opinion in microbiology 34929548 2022 Feb
FMRP regulates mRNAs encoding distinct functions in the cell body and dendrites of CA1 pyramidal neurons. Hale, Caryn R; Sawicka, Kirsty; Mora, Kevin; Fak, John J; Kang, Jin Joo; Cutrim, Paula; Cialowicz, Katarzyna; Carroll, Thomas S; Darnell, Robert B eLife 34939924 2021 12 23
Meiotic Cas9 expression mediates gene conversion in the male and female mouse germline. Weitzel, Alexander J; Grunwald, Hannah A; Weber, Ceri; Levina, Rimma; Gantz, Valentino M; Hedrick, Stephen M; Bier, Ethan; Cooper, Kimberly L PLoS biology 34941868 2021 12
Mouse characteristics that affect establishing xenografts from hepatocellular carcinoma patient biopsies in the United States. Zou, Chenhui; El Dika, Imane; Vercauteren, Koen O A; Capanu, Marinela; Chou, Joanne; Shia, Jinru; Pilet, Jill; Quirk, Corrine; Lalazar, Gadi; Andrus, Linda; Kabbani, Mohammad; Yaqubie, Amin; Khalil, Danny; Mergoub, Taha; Chiriboga, Luis; Rice, Charles M; Abou-Alfa, Ghassan K; de Jong, Ype P Cancer medicine 34951132 2022 Feb
In Silico Identification and Experimental Validation of Peptide-Based Inhibitors Targeting Clostridium difficile Toxin A. Xiao, Xingqing; Sarma, Sudeep; Menegatti, Stefano; Crook, Nathan; Magness, Scott T; Hall, Carol K ACS chemical biology 34965093 2022 01 21
Emerging rejuvenation strategies-Reducing the biological age. Zhang, Bohan; Trapp, Alexandre; Kerepesi, Csaba; Gladyshev, Vadim N Aging cell 34972247 2022 01
Fluorescence activation mechanism and imaging of drug permeation with new sensors for smoking-cessation ligands. Nichols, Aaron L; Blumenfeld, Zack; Fan, Chengcheng; Luebbert, Laura; Blom, Annet E M; Cohen, Bruce N; Marvin, Jonathan S; Borden, Philip M; Kim, Charlene H; Muthusamy, Anand K; Shivange, Amol V; Knox, Hailey J; Campello, Hugo Rego; Wang, Jonathan H; Dougherty, Dennis A; Looger, Loren L; Gallagher, Timothy; Rees, Douglas C; Lester, Henry A eLife 34982029 2022 01 04
Wearable aptamer-field-effect transistor sensing system for noninvasive cortisol monitoring. Wang, Bo; Zhao, Chuanzhen; Wang, Zhaoqing; Yang, Kyung-Ae; Cheng, Xuanbing; Liu, Wenfei; Yu, Wenzhuo; Lin, Shuyu; Zhao, Yichao; Cheung, Kevin M; Lin, Haisong; Hojaiji, Hannaneh; Weiss, Paul S; Stojanović, Milan N; Tomiyama, A Janet; Andrews, Anne M; Emaminejad, Sam Science advances 34985954 2022 Jan 07
Characterization of Definitive Regulatory B Cell Subsets by Cell Surface Phenotype, Function and Context. Neu, Savannah D; Dittel, Bonnie N Frontiers in immunology 34987513 2021
11C-Para-aminobenzoic acid PET imaging of S. aureus and MRSA infection in preclinical models and humans. Ordonez, Alvaro A; Parker, Matthew Fl; Miller, Robert J; Plyku, Donika; Ruiz-Bedoya, Camilo A; Tucker, Elizabeth W; Luu, Justin M; Dikeman, Dustin A; Lesniak, Wojciech G; Holt, Daniel P; Dannals, Robert F; Miller, Lloyd S; Rowe, Steven P; Wilson, David M; Jain, Sanjay K JCI insight 35014627 2022 01 11
Water-Soluble Luminescent Silicon Nanocrystals by Plasma-Induced Acrylic Acid Grafting and PEGylation. Li, Zhaohan; Mahajan, Advitiya; Andaraarachchi, Himashi P; Lee, Yeonjoo; Kortshagen, Uwe R ACS applied bio materials 35014827 2022 01 17
Fix and Click for Assay of Sphingolipid Signaling in Single Primary Human Intestinal Epithelial Cells. Gallion, Luke A; Wang, Yuli; Massaro, Angelo; Yao, Ming; Petersen, Brae V; Zhang, Quanzheng; Huang, Weigang; Carr, Adam J; Zhang, Qisheng; Allbritton, Nancy L Analytical chemistry 35020354 2022 Jan 25
Regional synapse gain and loss accompany memory formation in larval zebrafish. Dempsey, William P; Du, Zhuowei; Nadtochiy, Anna; Smith, Colton D; Czajkowski, Karl; Andreev, Andrey; Robson, Drew N; Li, Jennifer M; Applebaum, Serina; Truong, Thai V; Kesselman, Carl; Fraser, Scott E; Arnold, Don B Proceedings of the National Academy of Sciences of the United States of America 35031564 2022 01 18
Electrophysiological signatures of inhibitory control in children with Tourette syndrome and attention-deficit/hyperactivity disorder. Morand-Beaulieu, Simon; Smith, Stephanie D; Ibrahim, Karim; Wu, Jia; Leckman, James F; Crowley, Michael J; Sukhodolsky, Denis G Cortex; a journal devoted to the study of the nervous system and behavior 35042055 2022 Feb
FZD2 Regulates Murine Hair Follicle Function and Maintenance. Brennan-Crispi, Donna M; Frankfurter, Maxwell; Murphy, Christina; Sheng, Emily; Xu, Mingang; Morrisey, Edward E; Millar, Sarah E; Leung, Thomas H The Journal of investigative dermatology 35051380 2022 Jan 17
Omicron's message on vaccines: Boosting begets breadth. Wesemann, Duane R Cell 35065712 2022 02 03
High-dose rifampin improves bactericidal activity without increased intracerebral inflammation in animal models of tuberculous meningitis. Ruiz-Bedoya, Camilo A; Mota, Filipa; Tucker, Elizabeth W; Mahmud, Farina J; Reyes-Mantilla, Maria I; Erice, Clara; Bahr, Melissa; Flavahan, Kelly; de Jesus, Patricia; Kim, John; Foss, Catherine A; Peloquin, Charles A; Hammoud, Dima A; Ordonez, Alvaro A; Pardo, Carlos A; Jain, Sanjay K The Journal of clinical investigation 35085105 2022 03 15
RNA sequencing-based screen for reactivation of silenced alleles of autosomal genes. Gupta, Saumya; Lafontaine, Denis L; Vigneau, Sebastien; Mendelevich, Asia; Vinogradova, Svetlana; Igarashi, Kyomi J; Bortvin, Andrew; Alves-Pereira, Clara F; Nag, Anwesha; Gimelbrant, Alexander A G3 (Bethesda, Md.) 35100361 2022 02 04
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Fluorescent labeling of abundant reactive entities (FLARE) for cleared-tissue and super-resolution microscopy. Lee, Min Yen; Mao, Chenyi; Glaser, Adam K; Woodworth, Marcus A; Halpern, Aaron R; Ali, Adilijiang; Liu, Jonathan T C; Vaughan, Joshua C Nature protocols 35110740 2022 Mar
Harnessing the microbiome to restore immunotherapy response. Bullman, Susan; Eggermont, Alexander; Johnston, Christopher D; Zitvogel, Laurence Nature cancer 35121929 2021 Dec
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SWI/SNF senses carbon starvation with a pH-sensitive low-complexity sequence. Gutierrez, J Ignacio; Brittingham, Gregory P; Karadeniz, Yonca; Tran, Kathleen D; Dutta, Arnob; Holehouse, Alex S; Peterson, Craig L; Holt, Liam J eLife 35129437 2022 Feb 07
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Cytomegalovirus Infections in Ugandan Infants: Newborn-Mother Pairs, Neonates with Sepsis, and Infants with Hydrocephalus. Hehnly, Christine; Ssentongo, Paddy; Bebell, Lisa M; Burgoine, Kathy; Bazira, Joel; Fronterre, Claudio; Kumbakumba, Elias; Mulondo, Ronald; Mbabazi-Kabachelor, Edith; Morton, Sarah U; Ngonzi, Joseph; Ochora, Moses; Olupot-Olupot, Peter; Onen, Justin; Robe International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases 35150915 2022 Feb 09
Ataxia-linked SLC1A3 mutations alter EAAT1 chloride channel activity and glial regulation of CNS function. Wu, Qianyi; Akhter, Azman; Pant, Shashank; Cho, Eunjoo; Zhu, Jin Xin; Garner, Alastair; Ohyama, Tomoko; Tajkhorshid, Emad; van Meyel, Donald J; Ryan, Renae M The Journal of clinical investigation 35167492 2022 Apr 01
Repairing the blood-brain barrier. McMahon, Andrew P; Ichida, Justin K Science (New York, N.Y.) 35175806 2022 02 18
A Proximal-to-Distal Survey of Healthy Adult Human Small Intestine and Colon Epithelium by Single-Cell Transcriptomics. Burclaff, Joseph; Bliton, R Jarrett; Breau, Keith A; Ok, Meryem T; Gomez-Martinez, Ismael; Ranek, Jolene S; Bhatt, Aadra P; Purvis, Jeremy E; Woosley, John T; Magness, Scott T Cellular and molecular gastroenterology and hepatology 35176508 2022
Synthesis and Screening of a DNA-Encoded Library of Non-Peptidic Macrocycles. Koesema, Eric; Roy, Animesh; Paciaroni, Nicholas G; Coito, Carlos; Tokmina-Roszyk, Michal; Kodadek, Thomas Angewandte Chemie (International ed. in English) 35192245 2022 Feb 22
Mortality of Mechanically Ventilated COVID-19 Patients in Traditional versus Expanded Intensive Care Units in New York. Nishikimi, Mitsuaki; Jafari, Daniel; Singh, Neha; Shinozaki, Koichiro; Sison, Cristina P; Shoaib, Muhammad; Gong, Jonathan; Rasul, Rehana; Li, Timmy; Hayashida, Kei; Rolston, Daniel M; Miyara, Santiago J; Hirsch, Jamie S; Gandomi, Amir; White, Maureen T; Jarrett, Mark P; Lesser, Martin L; Becker, Lance B; Northwell Health COVID-19 Research Consortium Annals of the American Thoracic Society 35213292 2022 Aug
Expanding Knowledge and Changing Attitudes About Poverty: An Interactive, Interprofessional Approach. Marrast, Lyndonna M; Chim, Christine; Tocco, Jack; Coletti, Daniel J; Nouryan, Christian; Block, Lauren; Martinez, Johanna Journal of primary care & community health 35225052 2022 Jan-Dec
Prophylactic (R,S)-Ketamine Is Effective Against Stress-Induced Behaviors in Adolescent but Not Aged Mice. Mastrodonato, Alessia; Pavlova, Ina; Kee, Noelle C; Pham, Van Anh; McGowan, Josephine C; Mann, J John; Denny, Christine A The international journal of neuropsychopharmacology 35229871 2022 06 21
Physical properties of the cytoplasm modulate the rates of microtubule polymerization and depolymerization. Molines, Arthur T; Lemière, Joël; Gazzola, Morgan; Steinmark, Ida Emilie; Edrington, Claire H; Hsu, Chieh-Ting; Real-Calderon, Paula; Suhling, Klaus; Goshima, Gohta; Holt, Liam J; Thery, Manuel; Brouhard, Gary J; Chang, Fred Developmental cell 35231427 2022 02 28
Emerging strategies for engineering Escherichia coli Nissle 1917-based therapeutics. Lynch, Jason P; Goers, Lisa; Lesser, Cammie F Trends in pharmacological sciences 35232591 2022 Feb 26
Complete Genome Sequence of Clostridium cadaveris IFB3C5, Isolated from a Human Colonic Adenocarcinoma. McGlinchey, Adam S; Zepeda-Rivera, Martha A; Stepanovica, Marija; Baryiames, Alexander A; Jones, Dakota S; LaCourse, Kaitlyn D; Bullman, Susan; Johnston, Christopher D Microbiology resource announcements 35234492 2022 Mar 17
Synthetic mammalian signaling circuits for robust cell population control. Ma, Yitong; Budde, Mark W; Mayalu, Michaëlle N; Zhu, Junqin; Lu, Andrew C; Murray, Richard M; Elowitz, Michael B Cell 35235768 2022 Mar 17
Use of liquid lithography to form in vitro intestinal crypts with varying microcurvature surrounding the stem cell niche. Logan Howard, R; Wang, Yuli; Allbritton, Nancy L Journal of micromechanics and microengineering : structures, devices, and systems 35241878 2021 Dec
Complete Genome Sequence of Morganella morganii CTX51T, Isolated from a Human Cecal Adenocarcinoma. Stepanovica, Marija; Zepeda-Rivera, Martha A; McGlinchey, Adam S; Baryiames, Alexander A; Jones, Dakota S; LaCourse, Kaitlyn D; Bullman, Susan; Johnston, Christopher D Microbiology resource announcements 35254123 2022 Apr 21
Ultrabright Pdots with a Large Absorbance Cross Section and High Quantum Yield. Zhang, Jicheng; Yu, Jiangbo; Jiang, Yifei; Chiu, Daniel T ACS applied materials & interfaces 35258939 2022 Mar 23
Total-body PET/CT - First Clinical Experiences and Future Perspectives. Ng, Quinn Kwan-Tai; Triumbari, Elizabeth Katherine Anna; Omidvari, Negar; Cherry, Simon R; Badawi, Ramsey D; Nardo, Lorenzo Seminars in nuclear medicine 35272853 2022 May
Social reactivation of fear engrams enhances memory recall. Finkelstein, Abby Basya; Leblanc, Héloïse; Cole, Rebecca H; Gallerani, Troy; Vieira, Anahita; Zaki, Yosif; Ramirez, Steve Proceedings of the National Academy of Sciences of the United States of America 35286206 2022 Mar 22
Spatial CRISPR genomics identifies regulators of the tumor microenvironment. Dhainaut, Maxime; Rose, Samuel A; Akturk, Guray; Wroblewska, Aleksandra; Nielsen, Sebastian R; Park, Eun Sook; Buckup, Mark; Roudko, Vladimir; Pia, Luisanna; Sweeney, Robert; Le Berichel, Jessica; Wilk, C Matthias; Bektesevic, Anela; Lee, Brian H; Bhardwaj, Nina; Rahman, Adeeb H; Baccarini, Alessia; Gnjatic, Sacha; Pe'er, Dana; Merad, Miriam; Brown, Brian D Cell 35290801 2022 Mar 31
Barriers to and Facilitators for Acceptance of Comprehensive Clinical Decision Support System-Driven Care Maps for Patients With Thoracic Trauma: Interview Study Among Health Care Providers and Nurses. Jones, Emma K; Banks, Alyssa; Melton, Genevieve B; Porta, Carolyn M; Tignanelli, Christopher J JMIR human factors 35293873 2022 Mar 16
Xist spatially amplifies SHARP/SPEN recruitment to balance chromosome-wide silencing and specificity to the X chromosome. Jachowicz, Joanna W; Strehle, Mackenzie; Banerjee, Abhik K; Blanco, Mario R; Thai, Jasmine; Guttman, Mitchell Nature structural & molecular biology 35301492 2022 Mar
ABCDs of the Relative Contributions of Pseudomonas aeruginosa Quorum Sensing Systems to Virulence in Diverse Nonvertebrate Hosts. Vasquez-Rifo, Alejandro; Cook, Jamie; McEwan, Deborah L; Shikara, Dania; Ausubel, Frederick M; Di Cara, Francesca; Cheng, Zhenyu mBio 35311532 2022 04 26
Optogenetic Stimulation of Midbrain Dopamine Neurons Produces Striatal Serotonin Release. Dagher, Merel; Perrotta, Katie A; Erwin, Sara A; Hachisuka, Ayaka; Iyer, Rahul; Masmanidis, Sotiris C; Yang, Hongyan; Andrews, Anne M ACS chemical neuroscience 35312275 2022 04 06
Bite-size introduction to canine hematologic malignancies. Atherton, Matthew J; Mason, Nicola J Blood advances 35316831 2022 07 12
ExCel: Super-Resolution Imaging of C. elegans with Expansion Microscopy. Yu, Chih-Chieh Jay; Orozco Cosio, Danielle M; Boyden, Edward S Methods in molecular biology (Clifton, N.J.) 35320565 2022
COVID-19 and the HIV continuum in people living with HIV enrolled in Collaborating Consortium of Cohorts Producing NIDA Opportunities (C3PNO) cohorts. Lesko, Catherine R; Keruly, Jeanne C; Moore, Richard D; Shen, Nicola M; Pytell, Jarratt D; Lau, Bryan; Fojo, Anthony T; Mehta, Shruti H; Kipke, Michele; Baum, Marianna K; Shoptaw, Steven; Gorbach, Pamina M; Mustanski, Brian; Javanbakht, Marjan; Siminski, Suzanne; Chander, Geetanjali Drug and alcohol dependence 35331581 2022 Feb 12
Recent advances in the diagnosis and prognosis of amyotrophic lateral sclerosis. Goutman, Stephen A; Hardiman, Orla; Al-Chalabi, Ammar; Chió, Adriano; Savelieff, Masha G; Kiernan, Matthew C; Feldman, Eva L The Lancet. Neurology 35334233 2022 05
Emerging insights into the complex genetics and pathophysiology of amyotrophic lateral sclerosis. Goutman, Stephen A; Hardiman, Orla; Al-Chalabi, Ammar; Chió, Adriano; Savelieff, Masha G; Kiernan, Matthew C; Feldman, Eva L The Lancet. Neurology 35334234 2022 05
Planar Laser Activated Neuronal Scanning (PLANS) System for in vivo Flow Cytometry. Watson, Nicholas; Mondal, Sudip; DuPlissis, Andrew; Kim, Ki Hyun; Ben-Yakar, Adela Frontiers in optics. Annual Meeting of the Optical Society of America 35350105 2020 Sep
Co-evolution of interacting proteins through non-contacting and non-specific mutations. Ding, David; Green, Anna G; Wang, Boyuan; Lite, Thuy-Lan Vo; Weinstein, Eli N; Marks, Debora S; Laub, Michael T Nature ecology & evolution 35361892 2022 May
The tumour-associated microbiome. Johnston, Christopher D; Bullman, Susan Nature reviews. Gastroenterology & hepatology 35361914 2022 06
Distance-dependent resonance energy transfer in alkyl-terminated Si nanocrystal solids. Li, Zhaohan; Robinson, Zachary L; Elvati, Paolo; Violi, Angela; Kortshagen, Uwe R The Journal of chemical physics 35364875 2022 Mar 28
Cell type determination for cardiac differentiation occurs soon after seeding of human-induced pluripotent stem cells. Jiang, Connie L; Goyal, Yogesh; Jain, Naveen; Wang, Qiaohong; Truitt, Rachel E; Coté, Allison J; Emert, Benjamin; Mellis, Ian A; Kiani, Karun; Yang, Wenli; Jain, Rajan; Raj, Arjun Genome biology 35382863 2022 Apr 05
Rational Design of Silicon-Based Zinc Ionophores. Yamada, Kei; Deb, Arghya; Shoba, Veronika M; Lim, Donghyun; Maji, Basudeb; Modell, Ashley E; Choudhary, Amit Angewandte Chemie (International ed. in English) 35385189 2022 Jun 07
Z-α1-antitrypsin polymers impose molecular filtration in the endoplasmic reticulum after undergoing phase transition to a solid state. Chambers, Joseph E; Zubkov, Nikita; Kubánková, Markéta; Nixon-Abell, Jonathon; Mela, Ioanna; Abreu, Susana; Schwiening, Max; Lavarda, Giulia; López-Duarte, Ismael; Dickens, Jennifer A; Torres, Tomás; Kaminski, Clemens F; Holt, Liam J; Avezov, Edward; Huntington, James A; George-Hyslop, Peter St; Kuimova, Marina K; Marciniak, Stefan J Science advances 35394846 2022 Apr 08
The context-dependent, combinatorial logic of BMP signaling. Klumpe, Heidi E; Langley, Matthew A; Linton, James M; Su, Christina J; Antebi, Yaron E; Elowitz, Michael B Cell systems 35421361 2022 May 18
Ligand-receptor promiscuity enables cellular addressing. Su, Christina J; Murugan, Arvind; Linton, James M; Yeluri, Akshay; Bois, Justin; Klumpe, Heidi; Langley, Matthew A; Antebi, Yaron E; Elowitz, Michael B Cell systems 35421362 2022 05 18
Silver nanoparticle on zinc oxide array for label-free detection of opioids through surface-enhanced raman spectroscopy. Zhang, Michael; Jin, Congran; Nie, Yuan; Ren, Yundong; Hao, Nanjing; Xu, Zhe; Dong, Lin; Zhang, John X J RSC advances 35423637 2021 Mar 16
Tuning the Sensitivity of Genetically Encoded Fluorescent Potassium Indicators through Structure-Guided and Genome Mining Strategies. Torres Cabán, Cristina C; Yang, Minghan; Lai, Cuixin; Yang, Lina; Subach, Fedor V; Smith, Brian O; Piatkevich, Kiryl D; Boyden, Edward S ACS sensors 35427452 2022 05 27
Local translation in primary afferents and its contribution to pain. Gale, Jenna R; Gedeon, Jeremy Y; Donnelly, Christopher J; Gold, Michael S Pain 35438669 2022 Dec 01
Hippo Signaling Pathway Activation during SARS-CoV-2 Infection Contributes to Host Antiviral Response. Garcia, Gustavo; Wang, Yijie; Irudayam, Joseph Ignatius; Jeyachandran, Arjit Vijey; Cario, Sebastian Castillo; Sen, Chandani; Li, Shen; Li, Yunfeng; Kumar, Ashok; Nielsen-Saines, Karin; French, Samuel W; Shah, Priya S; Morizono, Kouki; Gomperts, Brigitte; Deb, Arjun; Ramaiah, Arunachalam; Arumugaswami, Vaithilingaraja bioRxiv : the preprint server for biology 35441167 2022 Apr 08
TRPV4: En RhoA To a Cure? Lu, Qun; Chen, Yan-Hua BioEssays : news and reviews in molecular, cellular and developmental biology 35441721 2022 06
Three Mutations Convert the Selectivity of a Protein Sensor from Nicotinic Agonists to S-Methadone for Use in Cells, Organelles, and Biofluids. Muthusamy, Anand K; Kim, Charlene H; Virgil, Scott C; Knox, Hailey J; Marvin, Jonathan S; Nichols, Aaron L; Cohen, Bruce N; Dougherty, Dennis A; Looger, Loren L; Lester, Henry A Journal of the American Chemical Society 35446570 2022 05 18
Circadian disruption of hippocampus in an early senescence male mouse model. Davis, Jennifer A; Paul, Jodi R; Mokashi, Mugdha V; Yates, Stefani A; Mount, Daniel J; Munir, Hira A; Goode, Lacy K; Young, Martin E; Allison, David B; Gamble, Karen L Pharmacology, biochemistry, and behavior 35447158 2022 06
Central memory T cells are the most effective precursors of resident memory T cells in human skin. Matos, Tiago R; Gehad, Ahmed; Teague, Jessica E; Dyring-Andersen, Beatrice; Benezeder, Theresa; Dowlatshahi, Mitra; Crouch, Jack; Watanabe, Yoshinori; O'Malley, John T; Kupper, Thomas S; Yang, Chao; Watanabe, Rei; Clark, Rachael A Science immunology 35452256 2022 04 22
Structural and functional impact by SARS-CoV-2 Omicron spike mutations. Zhang, Jun; Cai, Yongfei; Lavine, Christy L; Peng, Hanqin; Zhu, Haisun; Anand, Krishna; Tong, Pei; Gautam, Avneesh; Mayer, Megan L; Rits-Volloch, Sophia; Wang, Shaowei; Sliz, Piotr; Wesemann, Duane R; Yang, Wei; Seaman, Michael S; Lu, Jianming; Xiao, Tianshu; Chen, Bing Cell reports 35452593 2022 04 26
Genomewide CRISPR knockout screen identified PLAC8 as an essential factor for SADS-CoVs infection. Tse, Longping V; Meganck, Rita M; Araba, Kenza C; Yount, Boyd L; Shaffer, Kendall M; Hou, Yixuan J; Munt, Jennifer E; Adams, Lily E; Wykoff, Jason A; Morowitz, Jeremy M; Dong, Stephanie; Magness, Scott T; Marzluff, William F; Gonzalez, Liara M; Ehre, Camille; Baric, Ralph S Proceedings of the National Academy of Sciences of the United States of America 35476513 2022 May 03
The Giardia ventrolateral flange is a lamellar membrane protrusion that supports attachment. Hardin, William R; Alas, Germain C M; Taparia, Nikita; Thomas, Elizabeth B; Steele-Ogus, Melissa C; Hvorecny, Kelli L; Halpern, Aaron R; Tůmová, Pavla; Kollman, Justin M; Vaughan, Joshua C; Sniadecki, Nathan J; Paredez, Alexander R PLoS pathogens 35482847 2022 Apr
Functional genetic screen identifies ITPR3/calcium/RELB axis as a driver of colorectal cancer metastatic liver colonization. Moy, Ryan H; Nguyen, Alexander; Loo, Jia Min; Yamaguchi, Norihiro; Kajba, Christina M; Santhanam, Balaji; Ostendorf, Benjamin N; Wu, Y Gloria; Tavazoie, Saeed; Tavazoie, Sohail F Developmental cell 35487218 2022 05 09
A planar culture model of human absorptive enterocytes reveals metformin increases fatty acid oxidation and export. Gomez-Martinez, Ismael; Bliton, R Jarrett; Breau, Keith A; Czerwinski, Michael J; Williamson, Ian A; Wen, Jia; Rawls, John F; Magness, Scott T Cellular and molecular gastroenterology and hepatology 35489715 2022 Apr 27
Macroautophagy in CNS health and disease. Griffey, Christopher J; Yamamoto, Ai Nature reviews. Neuroscience 35505254 2022 Jul
Cortical basis for skilled vocalization. Cerkevich, Christina M; Rathelot, Jean-Alban; Strick, Peter L Proceedings of the National Academy of Sciences of the United States of America 35507879 2022 May 10
Plasmonic nanosensors for point-of-care biomarker detection. Jin, Congran; Wu, Ziqian; Molinski, John H; Zhou, Junhu; Ren, Yundong; Zhang, John X J Materials today. Bio 35514435 2022 Mar
Efficient transgenesis and homology-directed gene targeting in monolayers of primary human small intestinal and colonic epithelial stem cells. Breau, Keith A; Ok, Meryem T; Gomez-Martinez, Ismael; Burclaff, Joseph; Kohn, Nathan P; Magness, Scott T Stem cell reports 35523179 2022 Apr 25
Total-Body 18F-FDG PET/CT in Autoimmune Inflammatory Arthritis at Ultra-Low Dose: Initial Observations. Abdelhafez, Yasser; Raychaudhuri, Siba P; Mazza, Dario; Sarkar, Soumajyoti; Hunt, Heather L; McBride, Kristin; Nguyen, Mike; Caudle, Denise T; Spencer, Benjamin A; Omidvari, Negar A; Bang, Heejung; Cherry, Simon R; Nardo, Lorenzo; Badawi, Ramsey Derek; Chaudhari, Abhijit J Journal of nuclear medicine : official publication, Society of Nuclear Medicine 35589405 2022 May 19
Under the magnifying glass: The ups and downs of rDNA copy number. Kindelay, Selina M; Maggert, Keith A Seminars in cell & developmental biology 35595601 2022 May 18
Relating18F-FDG image signal-to-noise ratio to time-of-flight noise-equivalent count rate in total-body PET using the uEXPLORER scanner. Leung, Edwin K; Abdelhafez, Yasser G; Berg, Eric; Xie, Zhaoheng; Zhang, Xuezhu; Bayerlein, Reimund; Spencer, Benjamin; Li, Elizabeth; Omidvari, Negar; Selfridge, Aaron; Cherry, Simon R; Qi, Jinyi; Badawi, Ramsey D Physics in medicine and biology 35609588 2022 06 10
Transcription factor Acj6 controls dendrite targeting via a combinatorial cell-surface code. Xie, Qijing; Li, Jiefu; Li, Hongjie; Udeshi, Namrata D; Svinkina, Tanya; Orlin, Daniel; Kohani, Sayeh; Guajardo, Ricardo; Mani, D R; Xu, Chuanyun; Li, Tongchao; Han, Shuo; Wei, Wei; Shuster, S Andrew; Luginbuhl, David J; Quake, Stephen R; Murthy, Swetha E; Ting, Alice Y; Carr, Steven A; Luo, Liqun Neuron 35613619 2022 Jul 20
Laser particle activated cell sorting in microfluidics. Dannenberg, Paul H; Kang, Jisoo; Martino, Nicola; Kashiparekh, Anokhi; Forward, Sarah; Wu, Jiamin; Liapis, Andreas C; Wang, Jie; Yun, Seok-Hyun Lab on a chip 35621381 2022 06 14
Induction of synapse formation by de novo neurotransmitter synthesis. Burlingham, Scott R; Wong, Nicole F; Peterkin, Lindsay; Lubow, Lily; Dos Santos Passos, Carolina; Benner, Orion; Ghebrial, Michael; Cast, Thomas P; Xu-Friedman, Matthew A; Südhof, Thomas C; Chanda, Soham Nature communications 35650274 2022 06 01
The DNA glycosylase NEIL2 plays a vital role in combating SARS-CoV-2 infection. Hazra, Tapas; Tapryal, Nisha; Chakraborty, Anirban; Rayavara, Kempaiah; Wakamiya, Maki; Islam, Azharul; Pan, Lang; Hsu, Jason; Tat, Vivian; Maruyama, Junki; Hosoki, Koa; Sayed, Ibrahim; Alcantara, Joshua; Castillo, Vanessa; Tindle, Courtney; Sarker, Altaf; Cardenas, Victor; Sharma, Gulshan; Alexander, Laura Crotty; Sur, Sanjiv; Ghosh, Gourisankar; Paessler, Slobodan; Sahoo, Debashis; Ghosh, Pradipta; Das, Soumita; Boldogh, Istvan; Tseng, Chien-Te Research square 35665009 2022 May 27
Accumulation of endosymbiont genomes in an insect autosome followed by endosymbiont replacement. Tvedte, Eric S; Gasser, Mark; Zhao, Xuechu; Tallon, Luke J; Sadzewicz, Lisa; Bromley, Robin E; Chung, Matthew; Mattick, John; Sparklin, Benjamin C; Dunning Hotopp, Julie C Current biology : CB 35671755 2022 Jun 20
Active genetics comes alive: Exploring the broad applications of CRISPR-based selfish genetic elements (or gene-drives): Exploring the broad applications of CRISPR-based selfish genetic elements (or gene-drives). Gantz, Valentino M; Bier, Ethan BioEssays : news and reviews in molecular, cellular and developmental biology 35686327 2022 08
Orgo-Seq integrates single-cell and bulk transcriptomic data to identify cell type specific-driver genes associated with autism spectrum disorder. Lim, Elaine T; Chan, Yingleong; Dawes, Pepper; Guo, Xiaoge; Erdin, Serkan; Tai, Derek J C; Liu, Songlei; Reichert, Julia M; Burns, Mannix J; Chan, Ying Kai; Chiang, Jessica J; Meyer, Katharina; Zhang, Xiaochang; Walsh, Christopher A; Yankner, Bruce A; Raychaudhuri, Soumya; Hirschhorn, Joel N; Gusella, James F; Talkowski, Michael E; Church, George M Nature communications 35688811 2022 06 10
NUP62 localizes to ALS/FTLD pathological assemblies and contributes to TDP-43 insolubility. Gleixner, Amanda M; Verdone, Brandie Morris; Otte, Charlton G; Anderson, Eric N; Ramesh, Nandini; Shapiro, Olivia R; Gale, Jenna R; Mauna, Jocelyn C; Mann, Jacob R; Copley, Katie E; Daley, Elizabeth L; Ortega, Juan A; Cicardi, Maria Elena; Kiskinis, Evangelos; Kofler, Julia; Pandey, Udai B; Trotti, Davide; Donnelly, Christopher J Nature communications 35697676 2022 Jun 13
mirTarRnaSeq: An R/Bioconductor Statistical Package for miRNA-mRNA Target Identification and Interaction Analysis. Movassagh, Mercedeh; Morton, Sarah U; Hehnly, Christine; Smith, Jasmine; Doan, Trang T; Irizarry, Rafael; Broach, James R; Schiff, Steven J; Bailey, Jeffrey A; Paulson, Joseph N BMC genomics 35698050 2022 Jun 13
Neuroligin-3 confines AMPA receptors into nanoclusters, thereby controlling synaptic strength at the calyx of Held synapses. Han, Ying; Cao, Ran; Qin, Liming; Chen, Lulu Y; Tang, Ai-Hui; Südhof, Thomas C; Zhang, Bo Science advances 35704570 2022 Jun 17
Live analysis of position-effect variegation in Drosophila reveals different modes of action for HP1a and Su(var)3-9. Bughio, Farah J; Maggert, Keith A Proceedings of the National Academy of Sciences of the United States of America 35704756 2022 06 21
Systematically quantifying morphological features reveals constraints on organoid phenotypes. Beck, Lauren E; Lee, Jasmine; Coté, Christopher; Dunagin, Margaret C; Lukonin, Ilya; Salla, Nikkita; Chang, Marcello K; Hughes, Alex J; Mornin, Joseph D; Gartner, Zev J; Liberali, Prisca; Raj, Arjun Cell systems 35705097 2022 Jul 20
PET/CT imaging of CSF1R in a mouse model of tuberculosis. Foss, Catherine A; Ordonez, Alvaro A; Naik, Ravi; Das, Deepankar; Hall, Andrew; Wu, Yunkou; Dannals, Robert F; Jain, Sanjay K; Pomper, Martin G; Horti, Andrew G European journal of nuclear medicine and molecular imaging 35713665 2022 Jun 17
Posttranslational modifications optimize the ability of SARS-CoV-2 spike for effective interaction with host cell receptors. Kapoor, Karan; Chen, Tianle; Tajkhorshid, Emad Proceedings of the National Academy of Sciences of the United States of America 35737823 2022 Jul 12
Conservation and divergence of cortical cell organization in human and mouse revealed by MERFISH. Fang, Rongxin; Xia, Chenglong; Close, Jennie L; Zhang, Meng; He, Jiang; Huang, Zhengkai; Halpern, Aaron R; Long, Brian; Miller, Jeremy A; Lein, Ed S; Zhuang, Xiaowei Science (New York, N.Y.) 35771910 2022 07
A natural fusion of flavodiiron, rubredoxin, and rubredoxin oxidoreductase domains is a self-sufficient water-forming oxidase of Trichomonas vaginalis. Abdulaziz, Evana N; Bell, Tristan A; Rashid, Bazlur; Heacock, Mina L; Begic, Tarik; Skinner, Owen S; Yaseen, Mohammad A; Chao, Luke H; Mootha, Vamsi K; Pierik, Antonio J; Cracan, Valentin The Journal of biological chemistry 35780837 2022 08
Isolation and Processing of Murine White Adipocytes for Transcriptome and Epigenome Analyses. Yang, Chih-Hsiang; Longinotto, John; Panzeri, Ilaria; Arrigoni, Laura; Wegert, Vanessa; Heyne, Steffen; Seifert, Gabriel; Lempradl, Adelheid; Bönisch, Ulrike; Pospisilik, John Andrew Journal of visualized experiments : JoVE 35786676 2022 06 16
HDACs regulate the differentiation of endothelial cells from human iPSCs. Li, Tao; Wu, Haopeng; Wang, Pingping; Kim, Amy M; Jia, Junjing; Nolta, Jan A; Zhou, Ping Cell biochemistry and function 35789099 2022 Jul 05
Applications and Limitations of Oxime-Linked "Split PROTACs". Gui, Weijun; Kodadek, Thomas Chembiochem : a European journal of chemical biology 35802347 2022 Jul 08
Tissue-resident memory and circulating T cells are early responders to pre-surgical cancer immunotherapy. Luoma, Adrienne M; Suo, Shengbao; Wang, Yifan; Gunasti, Lauren; Porter, Caroline B M; Nabilsi, Nancy; Tadros, Jenny; Ferretti, Andrew P; Liao, Sida; Gurer, Cagan; Chen, Yu-Hui; Criscitiello, Shana; Ricker, Cora A; Dionne, Danielle; Rozenblatt-Rosen, Orit; Cell 35803260 2022 Aug 04
Nanoarchitecture and molecular interactions of epithelial cell junction proteins revealed by super-resolution microscopy. Naser, Amna N; Guiler, William; Lu, Qun; Chen, Yan-Hua Annals of the New York Academy of Sciences 35819053 2022 Jul 12
Molecular View into Preferential Binding of the Factor VII Gla Domain to Phosphatidic Acid. Muller, Melanie P; Morrissey, James H; Tajkhorshid, Emad Biochemistry 35853076 2022 08 16
Control of nuclear size by osmotic forces in Schizosaccharomyces pombe. Lemière, Joël; Real-Calderon, Paula; Holt, Liam J; Fai, Thomas G; Chang, Fred eLife 35856499 2022 Jul 20
Ingested (Oral) Adrenocorticotropic Hormone Inhibits IL-17 in the Central Nervous System in the Mouse Model of Multiple Sclerosis and Experimental Autoimmune Encephalomyelitis. Dittel, Landon J; Dittel, Bonnie N; Brod, Staley A ImmunoHorizons 35868840 2022 Jul 22
Engineering Modular 3D Liver Culture Microenvironments In Vitro to Parse the Interplay between Biophysical and Biochemical Microenvironment Cues on Hepatic Phenotypes. Wang, Alex J; Allen, Allysa; Sofman, Marianna; Sphabmixay, Pierre; Yildiz, Ece; Griffith, Linda G Advanced nanobiomed research 35872804 2022 Jan
Myeloperoxidase as a Marker to Differentiate Mouse Monocyte/Macrophage Subsets. Gurski, Cody J; Dittel, Bonnie N International journal of molecular sciences 35897821 2022 Jul 26
Differential richness inference for 16S rRNA marker gene surveys. Kumar, M Senthil; Slud, Eric V; Hehnly, Christine; Zhang, Lijun; Broach, James; Irizarry, Rafael A; Schiff, Steven J; Paulson, Joseph N Genome biology 35915508 2022 Aug 01
A Novel EGFRvIII T-Cell Bispecific Antibody for the Treatment of Glioblastoma. Iurlaro, Raffaella; Waldhauer, Inja; Planas-Rigol, Ester; Bonfill-Teixidor, Ester; Arias, Alexandra; Nicolini, Valeria; Freimoser-Grundschober, Anne; Cuartas, Isabel; Martínez-Moreno, Alba; Martínez-Ricarte, Francisco; Cordero, Esteban; Cicuendez, Marta; Molecular cancer therapeutics 35915983 2022 10 07
Association of race/ethnicity with mortality in patients hospitalized with COVID-19. Richardson, Safiya; Martinez, Johanna; Hirsch, Jamie S; Cerise, Jane; Lesser, Martin; Roswell, Robert O; Davidson, Karina W; Northwell Health COVID-19 Research Consortium PloS one 35925973 2022
A conserved Bacteroidetes antigen induces anti-inflammatory intestinal T lymphocytes. Bousbaine, Djenet; Fisch, Laura I; London, Mariya; Bhagchandani, Preksha; Rezende de Castro, Tiago B; Mimee, Mark; Olesen, Scott; Reis, Bernardo S; VanInsberghe, David; Bortolatto, Juliana; Poyet, Mathilde; Cheloha, Ross W; Sidney, John; Ling, Jingjing; Gupta, Aaron; Lu, Timothy K; Sette, Alessandro; Alm, Eric J; Moon, James J; Victora, Gabriel D; Mucida, Daniel; Ploegh, Hidde L; Bilate, Angelina M Science (New York, N.Y.) 35926021 2022 08 05
Cap-independent translation of GPLD1 enhances markers of brain health in long-lived mutant and drug-treated mice. Li, Xinna; Shi, Xiaofang; McPherson, Madaline; Hager, Mary; Garcia, Gonzalo G; Miller, Richard A Aging cell 35930768 2022 Sep
A genetic model for in vivo proximity labelling of the mammalian secretome. Yang, Rui; Meyer, Amanda S; Droujinine, Ilia A; Udeshi, Namrata D; Hu, Yanhui; Guo, Jinjin; McMahon, Jill A; Carey, Dominique K; Xu, Charles; Fang, Qiao; Sha, Jihui; Qin, Shishang; Rocco, David; Wohlschlegel, James; Ting, Alice Y; Carr, Steven A; Perrimon, Norbert; McMahon, Andrew P Open biology 35946312 2022 08
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Hippocampal fear engrams modulate ethanol-induced maladaptive contextual generalization in mice. Cincotta, Christine; Ruesch, Evan; Senne, Ryan; Ramirez, Steve Hippocampus 35950345 2022 Oct
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Stem cell therapy for central nervous system disorders: Metabolic interactions between transplanted cells and local microenvironments. Sakowski, Stacey A; Chen, Kevin S Neurobiology of disease 35988874 2022 10 15
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Structure of the Human BK Ion Channel in Lipid Environment. Tonggu, Lige; Wang, Liguo Membranes 36005673 2022 Jul 31
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Structure and engineering of the minimal type VI CRISPR-Cas13bt3. Nakagawa, Ryoya; Kannan, Soumya; Altae-Tran, Han; Takeda, Satoru N; Tomita, Atsuhiro; Hirano, Hisato; Kusakizako, Tsukasa; Nishizawa, Tomohiro; Yamashita, Keitaro; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu Molecular cell 36027912 2022 09 01
Sharing Begins at Home: How Continuous and Ubiquitous FAIRness Can Enhance Research Productivity and Data Reuse. Dempsey, William; Foster, Ian; Fraser, Scott; Kesselman, Carl Harvard data science review 36035065 2022
Venous waveform analysis detects acute right ventricular failure in a rat respiratory arrest model. Lefevre, Ryan J; Barajas, Matthew B; Balzer, Claudius; Baudenbacher, Franz J; Riess, Matthias L; Staudt, Genevieve; Hernandez, Antonio; Eagle, Susan S Pediatric research 36042330 2022 Aug 30
CIC missense variants contribute to susceptibility for spina bifida. Han, Xiao; Cao, Xuanye; Aguiar-Pulido, Vanessa; Yang, Wei; Karki, Menuka; Ramirez, Paula Andrea Pimienta; Cabrera, Robert M; Lin, Ying Linda; Wlodarczyk, Bogdan J; Shaw, Gary M; Ross, M Elizabeth; Zhang, Cuilian; Finnell, Richard H; Lei, Yunping Human mutation 36054333 2022 Sep 02
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CAQK, a peptide associating with extracellular matrix components targets sites of demyelinating injuries. Abi-Ghanem, Charly; Jonnalagadda, Deepa; Chun, Jerold; Kihara, Yasuyuki; Ranscht, Barbara Frontiers in cellular neuroscience 36072569 2022
Targeting BCL-XL in fibrolamellar hepatocellular carcinoma. Shebl, Bassem; Ng, Denise; Lalazar, Gadi; Rosemore, Carly; Finkelstein, Tova M; Migler, Rachael D; Zheng, Guangrong; Zhang, Peiyi; Jiang, Caroline S; Qureshi, Adam; Vaughan, Roger; Yarchoan, Mark; de Jong, Ype P; Rice, Charles M; Coffino, Philip; Ortiz, M JCI insight 36073545 2022 09 08
A single-administration therapeutic interfering particle reduces SARS-CoV-2 viral shedding and pathogenesis in hamsters. Chaturvedi, Sonali; Beutler, Nathan; Vasen, Gustavo; Pablo, Michael; Chen, Xinyue; Calia, Giuliana; Buie, Lauren; Rodick, Robert; Smith, Davey; Rogers, Thomas; Weinberger, Leor S Proceedings of the National Academy of Sciences of the United States of America 36074824 2022 09 27
Longitudinal Evaluation of Antibody Persistence in Mother-Infant Dyads Following SARS-CoV-2 Infection in Pregnancy. Cambou, Mary C; Liu, Christine M; Mok, Thalia; Fajardo-Martinez, Viviana; Paiola, Sophia G; Ibarrondo, Francisco J; Kerin, Tara; Fuller, Trevon; Tobin, Nicole H; Garcia, Gustavo; Bhattacharya, Debika; Aldrovandi, Grace M; Arumugaswami, Vaithilingaraja; Fo The Journal of infectious diseases 36082433 2022 Sep 09
A bacterial pan-genome makes gene essentiality strain-dependent and evolvable. Rosconi, Federico; Rudmann, Emily; Li, Jien; Surujon, Defne; Anthony, Jon; Frank, Matthew; Jones, Dakota S; Rock, Charles; Rosch, Jason W; Johnston, Christopher D; van Opijnen, Tim Nature microbiology 36097170 2022 Oct
Independent phenotypic plasticity axes define distinct obesity sub-types. Yang, Chih-Hsiang; Fagnocchi, Luca; Apostle, Stefanos; Wegert, Vanessa; Casaní-Galdón, Salvador; Landgraf, Kathrin; Panzeri, Ilaria; Dror, Erez; Heyne, Steffen; Wörpel, Till; Chandler, Darrell P; Lu, Di; Yang, Tao; Gibbons, Elizabeth; Guerreiro, Rita; Bra Nature metabolism 36097183 2022 Sep
Specialized Pro-Resolving Mediators as Resolution Pharmacology for the Control of Pain and Itch. Ji, Ru-Rong Annual review of pharmacology and toxicology 36100219 2023 Jan 20
Human hepatocyte PNPLA3-148M exacerbates rapid non-alcoholic fatty liver disease development in chimeric mice. Kabbani, Mohammad; Michailidis, Eleftherios; Steensels, Sandra; Fulmer, Clifton G; Luna, Joseph M; Le Pen, Jérémie; Tardelli, Matteo; Razooky, Brandon; Ricardo-Lax, Inna; Zou, Chenhui; Zeck, Briana; Stenzel, Ansgar F; Quirk, Corrine; Foquet, Lander; Ashbr Cell reports 36103835 2022 Sep 13
Single domain antibodies against enteric pathogen virulence factors are active as curli fiber fusions on probiotic E. coli Nissle 1917. Gelfat, Ilia; Aqeel, Yousuf; Tremblay, Jacqueline M; Jaskiewicz, Justyna J; Shrestha, Anishma; Lee, James N; Hu, Shenglan; Qian, Xi; Magoun, Loranne; Sheoran, Abhineet; Bedenice, Daniela; Giem, Colter; Manjula-Basavanna, Avinash; Pulsifer, Amanda R; Tu, H PLoS pathogens 36107831 2022 09
Condensed-phase signaling can expand kinase specificity and respond to macromolecular crowding. Sang, Dajun; Shu, Tong; Pantoja, Christian F; Ibáñez de Opakua, Alain; Zweckstetter, Markus; Holt, Liam J Molecular cell 36108633 2022 Oct 06
Rapamycin treatment during development extends life span and health span of male mice and Daphnia magna. Shindyapina, Anastasia V; Cho, Yongmin; Kaya, Alaattin; Tyshkovskiy, Alexander; Castro, José P; Deik, Amy; Gordevicius, Juozas; Poganik, Jesse R; Clish, Clary B; Horvath, Steve; Peshkin, Leonid; Gladyshev, Vadim N Science advances 36112674 2022 Sep 16
Amyotrophic lateral sclerosis. Feldman, Eva L; Goutman, Stephen A; Petri, Susanne; Mazzini, Letizia; Savelieff, Masha G; Shaw, Pamela J; Sobue, Gen Lancet (London, England) 36116464 2022 Oct 15
Label-free intraoperative histology of bone tissue via deep-learning-assisted ultraviolet photoacoustic microscopy. Cao, Rui; Nelson, Scott D; Davis, Samuel; Liang, Yu; Luo, Yilin; Zhang, Yide; Crawford, Brooke; Wang, Lihong V Nature biomedical engineering 36123403 2022 Sep 19
Immunization with Genetically Modified Trypanosomes Provides Protection against Transmissible Spongiform Encephalopathies. Triller, Gianna; Garyfallos, Dimitrios A; Papavasiliou, F Nina; Sklaviadis, Theodoros; Stavropoulos, Pete; Xanthopoulos, Konstantinos International journal of molecular sciences 36142526 2022 Sep 13
Replication-Deficient Zika Vector-Based Vaccine Provides Maternal and Fetal Protection in Mouse Model. Garcia Jr, Gustavo; Chakravarty, Nikhil; Abu, Angel Elma; Jeyachandran, Arjit Vijey; Takano, Kari-Ann; Brown, Rebecca; Morizono, Kouki; Arumugaswami, Vaithilingaraja Microbiology spectrum 36169338 2022 Oct 26
Lutetium background radiation in total-body PET-A simulation study on opportunities and challenges in PET attenuation correction. Omidvari, Negar; Cheng, Li; Leung, Edwin K; Abdelhafez, Yasser G; Badawi, Ramsey D; Ma, Tianyu; Qi, Jinyi; Cherry, Simon R Frontiers in nuclear medicine (Lausanne, Switzerland) 36172601 2022
Exploring Vessel Wall Biology In Vivo by Ultrasensitive Total-Body PET. Derlin, Thorsten; Spencer, Benjamin A; Mamach, Martin; Abdelhafez, Yasser; Nardo, Lorenzo; Badawi, Ramsey D; Cherry, Simon R; Bengel, Frank M Journal of nuclear medicine : official publication, Society of Nuclear Medicine 36175139 2023 Mar
Identification of orphan ligand-receptor relationships using a cell-based CRISPRa enrichment screening platform. Siepe, Dirk H; Henneberg, Lukas T; Wilson, Steven C; Hess, Gaelen T; Bassik, Michael C; Zinn, Kai; Garcia, K Christopher eLife 36178190 2022 Sep 30
Occupational history associates with ALS survival and onset segment. Goutman, Stephen A; Boss, Jonathan; Godwin, Christopher; Mukherjee, Bhramar; Feldman, Eva L; Batterman, Stuart A Amyotrophic lateral sclerosis & frontotemporal degeneration 36193557 2022 Oct 03
Profiling epigenetic age in single cells. Trapp, Alexandre; Kerepesi, Csaba; Gladyshev, Vadim N Nature aging 36211119 2021 Dec
miRNA analysis reveals novel dysregulated pathways in amyotrophic lateral sclerosis. Hur, Junguk; Paez-Colasante, Ximena; Figueroa-Romero, Claudia; Lo, Ting-Wen; Barmada, Sami J; Paulsen, Michelle; Ljungman, Mats; Alakwaa, Fadhl M; Savelieff, Masha G; Goutman, Stephen A; Feldman, Eva L Human molecular genetics 36219176 2022 Oct 11
In situ cell-type-specific cell-surface proteomic profiling in mice. Shuster, S Andrew; Li, Jiefu; Chon, URee; Sinantha-Hu, Miley C; Luginbuhl, David J; Udeshi, Namrata D; Carey, Dominique Kiki; Takeo, Yukari H; Xie, Qijing; Xu, Chuanyun; Mani, D R; Han, Shuo; Ting, Alice Y; Carr, Steven A; Luo, Liqun Neuron 36220098 2022 Dec 07
Trans-Compartmental Regulation of Tight Junction Barrier Function. Naser, Amna N; Lu, Qun; Chen, Yan-Hua Tissue barriers 36220768 2023 Oct 02
MiOS, an integrated imaging and computational strategy to model gene folding with nucleosome resolution. Neguembor, Maria Victoria; Arcon, Juan Pablo; Buitrago, Diana; Lema, Rafael; Walther, Jürgen; Garate, Ximena; Martin, Laura; Romero, Pablo; AlHaj Abed, Jumana; Gut, Marta; Blanc, Julie; Lakadamyali, Melike; Wu, Chao-Ting; Brun Heath, Isabelle; Orozco, Mod Nature structural & molecular biology 36220894 2022 Oct
Structures of the TMC-1 complex illuminate mechanosensory transduction. Jeong, Hanbin; Clark, Sarah; Goehring, April; Dehghani-Ghahnaviyeh, Sepehr; Rasouli, Ali; Tajkhorshid, Emad; Gouaux, Eric Nature 36224384 2022 10
The multiple roles of life stress in metabolic disorders. Kivimäki, Mika; Bartolomucci, Alessandro; Kawachi, Ichiro Nature reviews. Endocrinology 36224493 2023 Jan
Targeting lipid-protein interaction to treat Syk-mediated acute myeloid leukemia. Singaram, Indira; Sharma, Ashutosh; Pant, Shashank; Lihan, Muyun; Park, Mi-Jeong; Pergande, Melissa; Buwaneka, Pawanthi; Hu, Yusi; Mahmud, Nadim; Kim, You-Me; Cologna, Stephanie; Gevorgyan, Vladimir; Khan, Irum; Tajkhorshid, Emad; Cho, Wonhwa Nature chemical biology 36229686 2022 Oct 13
Somatic genomic mosaicism in the brain: Identified mutations provide challenges and opportunities for the clinic. Chun, Jerold Med (New York, N.Y.) 36242998 2022 Oct 14
Oligodendroglial macroautophagy is essential for myelin sheath turnover to prevent neurodegeneration and death. Aber, Etan R; Griffey, Christopher J; Davies, Tim; Li, Alice M; Yang, Young Joo; Croce, Katherine R; Goldman, James E; Grutzendler, Jaime; Canman, Julie C; Yamamoto, Ai Cell reports 36261002 2022 10 18
Spatially resolved epigenomic profiling of single cells in complex tissues. Lu, Tian; Ang, Cheen Euong; Zhuang, Xiaowei Cell 36272405 2022 Nov 10
Assessing the Validity of the Ask Suicide-Screening Questions in Black Youth. Horowitz, Lisa M; Mournet, Annabelle M; Sheftall, Arielle; He, Jian-Ping; Lowry, Nathan J; Aguinaldo, Laika D; Sullivant, Shayla A; Wharff, Elizabeth A; Merikangas, Kathleen R; Pao, Maryland; Bridge, Jeffrey A Journal of the Academy of Consultation-Liaison Psychiatry 36273745 2022 Oct 20
ClampFISH 2.0 enables rapid, scalable amplified RNA detection in situ. Dardani, Ian; Emert, Benjamin L; Goyal, Yogesh; Jiang, Connie L; Kaur, Amanpreet; Lee, Jasmine; Rouhanifard, Sara H; Alicea, Gretchen M; Fane, Mitchell E; Xiao, Min; Herlyn, Meenhard; Weeraratna, Ashani T; Raj, Arjun Nature methods 36280724 2022 Nov
Analyses of the autism-associated neuroligin-3 R451C mutation in human neurons reveal a gain-of-function synaptic mechanism. Wang, Le; Mirabella, Vincent R; Dai, Rujia; Su, Xiao; Xu, Ranjie; Jadali, Azadeh; Bernabucci, Matteo; Singh, Ishnoor; Chen, Yu; Tian, Jianghua; Jiang, Peng; Kwan, Kevin Y; Pak, ChangHui; Liu, Chunyu; Comoletti, Davide; Hart, Ronald P; Chen, Chao; Südhof, Molecular psychiatry 36280753 2022 Oct 24
Series of virtual light therapy interventions for fatigue: a feasibility pilot study protocol for a series of personalised (N-of-1) trials. Butler, Mark; D'Angelo, Stefani; Lewis, Courtney; Miller, Danielle; Perrin, Alexandra; Suls, Jerry; Chandereng, Thevaa; Cheung, Ying Kuen; Davidson, Karina W BMJ open 36283748 2022 10 25
Acceptability and Feasibility of eSCCIP: Results From a Pilot Study of the Electronic Surviving Cancer Competently Intervention Program. Canter, Kimberly S; Vega, Gabriela; Perez Ramirez, Alejandra; Munoz Osorio, Angel; Thomas, Courtney; Lewis, Amanda M; Arasteh, Kamyar; Kazak, Anne Journal of pediatric psychology 36303445 2023 Mar 20
High-throughput sequencing of single neuron projections reveals spatial organization in the olfactory cortex. Chen, Yushu; Chen, Xiaoyin; Baserdem, Batuhan; Zhan, Huiqing; Li, Yan; Davis, Martin B; Kebschull, Justus M; Zador, Anthony M; Koulakov, Alexei A; Albeanu, Dinu F Cell 36306734 2022 Oct 27
Body mass index associates with amyotrophic lateral sclerosis survival and metabolomic profiles. Goutman, Stephen A; Boss, Jonathan; Iyer, Gayatri; Habra, Hani; Savelieff, Masha G; Karnovsky, Alla; Mukherjee, Bhramar; Feldman, Eva L Muscle & nerve 36321729 2022 Nov 02
Scientific opportunities in resilience research for cardiovascular health and wellness. Report from a National Heart, Lung, and Blood Institute workshop. Taylor, Herman A; Finkel, Toren; Gao, Yunling; Ballinger, Scott W; Campo, Rebecca; Chen, Rong; Chen, Shu Hui; Davidson, Karina; Iruela-Arispe, M Luisa; Jaquish, Cashell; LeBrasseur, Nathan K; Odden, Michelle C; Papanicolaou, George J; Picard, Martin; Srinivas, Pothur; Tjurmina, Olga; Wolz, Michael; Galis, Zorina S FASEB journal : official publication of the Federation of American Societies for Experimental Biology 36322029 2022 Dec
Buffer glucose adjustment affects myocardial function after ischemia-reperfusion in long-term diabetic rat isolated hearts. Balzer, Claudius; Cleveland, William J; Li, Zhu; Riess, Matthias L Physiological reports 36324287 2022 11
IDENTIFIABILITY OF INFECTION MODEL PARAMETERS EARLY IN AN EPIDEMIC. Sauer, Timothy; Berry, Tyrus; Ebeigbe, Donald; Norton, Michael M; Whalen, Andrew J; Schiff, Steven J SIAM journal on control and optimization 36338855 2022
Hippo signaling pathway activation during SARS-CoV-2 infection contributes to host antiviral response. Garcia Jr, Gustavo; Jeyachandran, Arjit Vijey; Wang, Yijie; Irudayam, Joseph Ignatius; Cario, Sebastian Castillo; Sen, Chandani; Li, Shen; Li, Yunfeng; Kumar, Ashok; Nielsen-Saines, Karin; French, Samuel W; Shah, Priya S; Morizono, Kouki; Gomperts, Brigitte N; Deb, Arjun; Ramaiah, Arunachalam; Arumugaswami, Vaithilingaraja PLoS biology 36346780 2022 Nov
An automated feeding system for the African killifish reveals effects of dietary restriction on lifespan and allows scalable assessment of associative learning. McKay, Andrew; Costa, Emma K; Chen, Jingxun; Hu, Chi-Kuo; Chen, Xiaoshan; Bedbrook, Claire Nicole; Khondker, Rishad C; Thielvoldt, Mike; Priya Singh, Param; Wyss-Coray, Tony; Brunet, Anne eLife 36354233 2022 Nov 10
In Silico Genome Analysis Reveals the Evolution and Potential Impact of SARS-CoV-2 Omicron Structural Changes on Host Immune Evasion and Antiviral Therapeutics. Chauhan, Dhruv; Chakravarty, Nikhil; Jeyachandran, Arjit Vijey; Jayakarunakaran, Akshaya; Sinha, Sanjeev; Mishra, Rakesh; Arumugaswami, Vaithilingaraja; Ramaiah, Arunachalam Viruses 36366559 2022 Nov 06
Type IV Pili Are a Critical Virulence Factor in Clinical Isolates of Paenibacillus thiaminolyticus. Hehnly, Christine; Shi, Aiqin; Ssentongo, Paddy; Zhang, Lijun; Isaacs, Albert; Morton, Sarah U; Streck, Nicholas; Erdmann-Gilmore, Petra; Tolstoy, Igor; Townsend, R Reid; Limbrick, David D; Paulson, Joseph N; Ericson, Jessica E; Galperin, Michael Y; Schiff, Steven J; Broach, James R mBio 36374038 2022 Dec 20
Genetic architecture of natural variation of cardiac performance from flies to humans. Saha, Saswati; Spinelli, Lionel; Castro Mondragon, Jaime A; Kervadec, Anaïs; Lynott, Michaela; Kremmer, Laurent; Roder, Laurence; Krifa, Sallouha; Torres, Magali; Brun, Christine; Vogler, Georg; Bodmer, Rolf; Colas, Alexandre R; Ocorr, Karen; Perrin, Laurent eLife 36383075 2022 Nov 16
The cancer chemotherapeutic 5-fluorouracil is a potent Fusobacterium nucleatum inhibitor and its activity is modified by intratumoral microbiota. LaCourse, Kaitlyn D; Zepeda-Rivera, Martha; Kempchinsky, Andrew G; Baryiames, Alexander; Minot, Samuel S; Johnston, Christopher D; Bullman, Susan Cell reports 36384132 2022 Nov 15
Effect of the intratumoral microbiota on spatial and cellular heterogeneity in cancer. Galeano Niño, Jorge Luis; Wu, Hanrui; LaCourse, Kaitlyn D; Kempchinsky, Andrew G; Baryiames, Alexander; Barber, Brittany; Futran, Neal; Houlton, Jeffrey; Sather, Cassie; Sicinska, Ewa; Taylor, Alison; Minot, Samuel S; Johnston, Christopher D; Bullman, Susan Nature 36385528 2022 Nov
Targeting transmembrane-domain-less MOG expression to platelets prevents disease development in experimental autoimmune encephalomyelitis. Cai, Yuanhua; Schroeder, Jocelyn A; Jing, Weiqing; Gurski, Cody; Williams, Calvin B; Wang, Shaoyuan; Dittel, Bonnie N; Shi, Qizhen Frontiers in immunology 36389708 2022
A Statistical Perspective on the Challenges in Molecular Microbial Biology. Jeganathan, Pratheepa; Holmes, Susan P Journal of agricultural, biological, and environmental statistics 36398283 2021 Jun
Extraction and Purification of Single Nuclei from Frozen Human Brain Tissue. Palmer, Carter R; Chun, Jerold Methods in molecular biology (Clifton, N.J.) 36399263 2023
Flexible and Implantable Polyimide Aptamer-Field-Effect Transistor Biosensors. Zhao, Chuanzhen; Man, Tianxing; Cao, Yan; Weiss, Paul S; Monbouquette, Harold G; Andrews, Anne M ACS sensors 36399772 2022 Dec 23
Identifying Common Molecular Mechanisms in Experimental and Human Acute Kidney Injury. Gerhardt, Louisa M S; McMahon, Andrew P Seminars in nephrology 36402654 2022 May
Controlling the crowd with a WNK. Holt, Liam Joseph; Denes, Lance T Cell 36423576 2022 Nov 23
Weapons of stress reduction: (R,S)-ketamine and its metabolites as prophylactics for the prevention of stress-induced psychiatric disorders. Chen, Briana K; Denny, Christine A Neuropharmacology 36427554 2023 Feb 15
Simultaneous mapping of 3D structure and nascent RNAs argues against nuclear compartments that preclude transcription. Goronzy, Isabel N; Quinodoz, Sofia A; Jachowicz, Joanna W; Ollikainen, Noah; Bhat, Prashant; Guttman, Mitchell Cell reports 36450242 2022 Nov 29
Allelic correlation is a marker of trade-offs between barriers to transmission of expression variability and signal responsiveness in genetic networks. Boe, Ryan H; Ayyappan, Vinay; Schuh, Lea; Raj, Arjun Cell systems 36450286 2022 Dec 21
An in silico method to assess antibody fragment polyreactivity. Harvey, Edward P; Shin, Jung-Eun; Skiba, Meredith A; Nemeth, Genevieve R; Hurley, Joseph D; Wellner, Alon; Shaw, Ada Y; Miranda, Victor G; Min, Joseph K; Liu, Chang C; Marks, Debora S; Kruse, Andrew C Nature communications 36477674 2022 Dec 07
Nuclear import receptors are recruited by FG-nucleoporins to rescue hallmarks of TDP-43 proteinopathy. Khalil, Bilal; Chhangani, Deepak; Wren, Melissa C; Smith, Courtney L; Lee, Jannifer H; Li, Xingli; Puttinger, Christian; Tsai, Chih-Wei; Fortin, Gael; Morderer, Dmytro; Gao, Junli; Liu, Feilin; Lim, Chun Kim; Chen, Jingjiao; Chou, Ching-Chieh; Croft, Cara L; Gleixner, Amanda M; Donnelly, Christopher J; Golde, Todd E; Petrucelli, Leonard; Oskarsson, Björn; Dickson, Dennis W; Zhang, Ke; Shorter, James; Yoshimura, Shige H; Barmada, Sami J; Rincon-Limas, Diego E; Rossoll, Wilfried Molecular neurodegeneration 36482422 2022 Dec 08
Cryo-EM structures of human ABCA7 provide insights into its phospholipid translocation mechanisms. Le, Le Thi My; Thompson, James Robert; Dehghani-Ghahnaviyeh, Sepehr; Pant, Shashank; Dang, Phuoc Xuan; French, Jarrod Bradley; Kanikeyo, Takahisa; Tajkhorshid, Emad; Alam, Amer The EMBO journal 36484366 2023 Feb 01
Synthetic cytokine circuits that drive T cells into immune-excluded tumors. Allen, Greg M; Frankel, Nicholas W; Reddy, Nishith R; Bhargava, Hersh K; Yoshida, Maia A; Stark, Sierra R; Purl, Megan; Lee, Jungmin; Yee, Jacqueline L; Yu, Wei; Li, Aileen W; Garcia, K Christopher; El-Samad, Hana; Roybal, Kole T; Spitzer, Matthew H; Lim, Wendell A Science (New York, N.Y.) 36520915 2022 Dec 16
pH-Responsive Charge-Conversion Progelator Peptides. Carlini, Andrea S; Choi, Wonmin; McCallum, Naneki C; Gianneschi, Nathan C Advanced functional materials 36530181 2021 Mar 24
Fluorescence Screens for Identifying Central Nervous System-Acting Drug-Biosensor Pairs for Subcellular and Supracellular Pharmacokinetics. Beatty, Zoe G; Muthusamy, Anand K; Unger, Elizabeth K; Dougherty, Dennis A; Tian, Lin; Looger, Loren L; Shivange, Amol V; Bera, Kallol; Lester, Henry A; Nichols, Aaron L Bio-protocol 36532688 2022 Nov 20
Systems Biology Analysis of Temporal Dynamics That Govern Endothelial Response to Cyclic Stretch. Lai, Michael W; Chow, Nathan; Checco, Antonio; Kunar, Balvir; Redmond, David; Rafii, Shahin; Rabbany, Sina Y Biomolecules 36551265 2022 Dec 08
A genome-wide CRISPR screen identifies WDFY3 as a regulator of macrophage efferocytosis. Shi, Jianting; Wu, Xun; Wang, Ziyi; Li, Fang; Meng, Yujiao; Moore, Rebecca M; Cui, Jian; Xue, Chenyi; Croce, Katherine R; Yurdagul Jr, Arif; Doench, John G; Li, Wei; Zarbalis, Konstantinos S; Tabas, Ira; Yamamoto, Ai; Zhang, Hanrui Nature communications 36566259 2022 Dec 24
Differential dynamics and direct interaction of bound ligands with lipids in multidrug transporter ABCG2. Rasouli, Ali; Yu, Qin; Dehghani-Ghahnaviyeh, Sepehr; Wen, Po-Chao; Kowal, Julia; Locher, Kaspar P; Tajkhorshid, Emad Proceedings of the National Academy of Sciences of the United States of America 36580587 2023 Jan 03
Bayesian semiparametric Markov renewal mixed models for vocalization syntax. Wu, Yutong; Jarvis, Erich D; Sarkar, Abhra Biostatistics (Oxford, England) 36583955 2022 Dec 30
Recording of cellular physiological histories along optically readable self-assembling protein chains. Linghu, Changyang; An, Bobae; Shpokayte, Monika; Celiker, Orhan T; Shmoel, Nava; Zhang, Ruihan; Zhang, Chi; Park, Demian; Park, Won Min; Ramirez, Steve; Boyden, Edward S Nature biotechnology 36593405 2023 May
Helicobacter pylori Chronic Infection Selects for Effective Colonizers of Metaplastic Glands. O'Brien, V P; Jackson, L K; Frick, J P; Rodriguez Martinez, A E; Jones, D S; Johnston, C D; Salama, N R mBio 36598261 2023 Feb 28
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Role of MEF2C in the Endothelial Cells Derived from Human Induced Pluripotent Stem Cells. Li, Tao; Conroy, Kelsey L; Kim, Amy M; Halmai, Julian; Gao, Kewa; Moreno, Emily; Wang, Aijun; Passerini, Anthony G; Nolta, Jan A; Zhou, Ping Stem cells (Dayton, Ohio) 36639926 2023 Apr 25
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Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim, Tae-Wuk; Park, Chan Ho; Hsu, Chuan-Chih; Kim, Yeong-Woo; Ko, Yeong-Woo; Zhang, Zhenzhen; Zhu, Jia-Ying; Hsiao, Yu-Chun; Branon, Tess; Kaasik, Krista; Saldivar, Evan; Li, Kevin; Pasha, Asher; Provart, Nicholas J; Burlingame, Alma L; Xu, Shou-Ling; Tin The Plant cell 36660928 2023 Mar 15
Ozone Disinfection for Elimination of Bacteria and Degradation of SARS-CoV2 RNA for Medical Environments. Westover, Craig; Rahmatulloev, Savlatjon; Danko, David; Afshin, Evan E; O'Hara, Niamh B; Ounit, Rachid; Bezdan, Daniela; Mason, Christopher E Genes 36672826 2022 Dec 28
Differential Susceptibility of Fetal Retinal Pigment Epithelial Cells, hiPSC- Retinal Stem Cells, and Retinal Organoids to Zika Virus Infection. Contreras, Deisy; Garcia Jr, Gustavo; Jones, Melissa Kaye; Martinez, Laura E; Jayakarunakaran, Akshaya; Gangalapudi, Vineela; Tang, Jie; Wu, Ying; Zhao, Jiagang J; Chen, Zhaohui; Ramaiah, Arunachalam; Tsui, Irena; Kumar, Ashok; Nielsen-Saines, Karin; Wang, Shaomei; Arumugaswami, Vaithilingaraja Viruses 36680182 2023 Jan 01
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Phase Separation in Biology and Disease; Current Perspectives and Open Questions. Boeynaems, Steven; Chong, Shasha; Gsponer, Jörg; Holt, Liam; Milovanovic, Dragomir; Mitrea, Diana M; Mueller-Cajar, Oliver; Portz, Bede; Reilly, John F; Reinkemeier, Christopher D; Sabari, Benjamin R; Sanulli, Serena; Shorter, James; Sontag, Emily; Strader, Lucia; Stachowiak, Jeanne; Weber, Stephanie C; White, Michael; Zhang, Huaiying; Zweckstetter, Markus; Elbaum-Garfinkle, Shana; Kriwacki, Richard Journal of molecular biology 36690068 2023 Mar 01
An atlas of lamina-associated chromatin across twelve human cell types reveals an intermediate chromatin subtype. Shah, Parisha P; Keough, Kathleen C; Gjoni, Ketrin; Santini, Garrett T; Abdill, Richard J; Wickramasinghe, Nadeera M; Dundes, Carolyn E; Karnay, Ashley; Chen, Angela; Salomon, Rachel E A; Walsh, Patrick J; Nguyen, Son C; Whalen, Sean; Joyce, Eric F; Loh, Kyle M; Dubois, Nicole; Pollard, Katherine S; Jain, Rajan Genome biology 36691074 2023 Jan 23
A modified Michaelis-Menten equation estimates growth from birth to 3 years in healthy babies in the US. Walters, William; Ley, Catherine; Hastie, Trevor; Ley, Ruth; Parsonnet, Julie Research square 36711501 2023 Jun 22
Increased mesoscale diffusivity in response to acute glucose starvation. Xie, Ying; Gresham, David; Holt, Liam bioRxiv : the preprint server for biology 36711511 2023 Jan 12
Broad-spectrum antiviral inhibitors targeting pandemic potential RNA viruses. Garcia, Gustavo; Irudayam, Joseph Ignatius; Jeyachandran, Arjit Vijay; Dubey, Swati; Chang, Christina; Cario, Sebastian Castillo; Price, Nate; Arumugam, Sathya; Marquez, Angelica L; Shah, Aayushi; Fanaei, Amir; Chakravarty, Nikhil; Joshi, Shantanu; Sinha, Sanjeev; French, Samuel W; Parcells, Mark; Ramaiah, Arunachalam; Arumugaswami, Vaithilingaraja bioRxiv : the preprint server for biology 36711787 2023 Jan 20
Design of 8-mer Peptides that Block Clostridioides difficile Toxin A in Intestinal Cells. Sarma, Sudeep; Catella, Carly M; Pedro, Ellyce T San; Xiao, Xingqing; Durmusoglu, Deniz; Menegatti, Stefano; Crook, Nathan; Magness, Scott T; Hall, Carol K bioRxiv : the preprint server for biology 36711911 2023 Jan 12
Interactive computational and experimental approaches improve the sensitivity of periplasmic binding protein-based nicotine biosensors for measurements in biofluids. Haloi, Nandan; Huang, Shan; Nichols, Aaron L; Fine, Eve J; Friesenhahn, Nicholas J; Marotta, Christopher B; Dougherty, Dennis A; Lindahl, Erik; Howard, Rebecca J; Mayo, Stephen L; Lester, Henry A bioRxiv : the preprint server for biology 36712031 2024 Jan 18
NOVA1 acts on Impact to regulate hypothalamic function and translation in inhibitory neurons. Tajima, Yoko; Ito, Keiichi; Yuan, Yuan; Frank, Mayu O; Saito, Yuhki; Darnell, Robert B Cell reports 36716149 2023 Feb 28
A trypanosome-derived immunotherapeutics platform elicits potent high-affinity antibodies, negating the effects of the synthetic opioid fentanyl. Triller, Gianna; Vlachou, Evi P; Hashemi, Hamidreza; van Straaten, Monique; Zeelen, Johan P; Kelemen, Yosip; Baehr, Carly; Marker, Cheryl L; Ruf, Sandra; Svirina, Anna; Chandra, Monica; Urban, Katharina; Gkeka, Anastasia; Kruse, Sebastian; Baumann, Andreas; Miller, Aubry K; Bartel, Marc; Pravetoni, Marco; Stebbins, C Erec; Papavasiliou, F Nina; Verdi, Joseph P Cell reports 36719797 2023 Feb 28
The effect of a pharmaceutical ghrelin agonist on lifespan in C57BL/6J male mice: A controlled experiment. Kaiser, Kathryn A; Kadish, Inga; van Groen, Thomas; Smith Jr, Daniel L; Dickinson, Stephanie; Henschel, Beate; Parker, Erik S; Brown, Andrew W; Allison, David B Aging cell 36734122 2023 Apr
SYF2 suppression mitigates neurodegeneration in models of diverse forms of ALS. Linares, Gabriel R; Li, Yichen; Chang, Wen-Hsuan; Rubin-Sigler, Jasper; Mendonca, Stacee; Hong, Sarah; Eoh, Yunsun; Guo, Wenxuan; Huang, Yi-Hsuan; Chang, Jonathan; Tu, Sharon; Dorjsuren, Nomongo; Santana, Manuel; Hung, Shu-Ting; Yu, Johnny; Perez, Joscany; Chickering, Michael; Cheng, Tze-Yuan; Huang, Chi-Chou; Lee, Shih-Jong James; Deng, Hao-Jen; Bach, Kieu-Tram; Gray, Kamden; Subramanyam, Vishvak; Rosenfeld, Jeffrey; Alworth, Samuel V; Goodarzi, Hani; Ichida, Justin K Cell stem cell 36736291 2023 Feb 02
Spin glasses, error correcting codes, and synchronization of human stem cell organoids. Thomson, Matt Cell 36736298 2023 Feb 02
High central venous pressure amplitude predicts successful defibrillation in a porcine model of cardiac arrest. Balzer, Claudius; Eagle, Susan S; Yannopoulos, Demetris; Aufderheide, Tom P; Riess, Matthias L Resuscitation 36736947 2023 Apr
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PIKFYVE inhibition mitigates disease in models of diverse forms of ALS. Hung, Shu-Ting; Linares, Gabriel R; Chang, Wen-Hsuan; Eoh, Yunsun; Krishnan, Gopinath; Mendonca, Stacee; Hong, Sarah; Shi, Yingxiao; Santana, Manuel; Kueth, Chuol; Macklin-Isquierdo, Samantha; Perry, Sarah; Duhaime, Sarah; Maios, Claudia; Chang, Jonathan; Perez, Joscany; Couto, Alexander; Lai, Jesse; Li, Yichen; Alworth, Samuel V; Hendricks, Eric; Wang, Yaoming; Zlokovic, Berislav V; Dickman, Dion K; Parker, J Alex; Zarnescu, Daniela C; Gao, Fen-Biao; Ichida, Justin K Cell 36754049 2023 Feb 16
A new microphysiological system shows hypoxia primes human ISCs for interleukin-dependent rescue of stem cell activity. Rivera, Kristina R; Bliton, R Jarrett; Burclaff, Joseph; Czerwinski, Michael J; Liu, Jintong; Trueblood, Jessica M; Hinesley, Caroline M; Breau, Keith A; Joshi, Shlok; Pozdin, Vladimir A; Yao, Ming; Ziegler, Amanda L; Blikslager, Anthony T; Daniele, Michael A; Magness, Scott T bioRxiv : the preprint server for biology 36778265 2023 Feb 01
Crosstalk between the Rho and Rab family of small GTPases in neurodegenerative disorders. Nik Akhtar, Shayan; Bunner, Wyatt P; Brennan, Elizabeth; Lu, Qun; Szatmari, Erzsebet M Frontiers in cellular neuroscience 36779014 2023
Foreign RNA spike-ins enable accurate allele-specific expression analysis at scale. Mendelevich, Asia; Gupta, Saumya; Pakharev, Aleksei; Teodosiadis, Athanasios; Mironov, Andrey A; Gimelbrant, Alexander A bioRxiv : the preprint server for biology 36798258 2023 Feb 12
Retrospective identification of intrinsic factors that mark pluripotency potential in rare somatic cells. Jain, Naveen; Goyal, Yogesh; Dunagin, Margaret C; Cote, Christopher J; Mellis, Ian A; Emert, Benjamin; Jiang, Connie L; Dardani, Ian P; Reffsin, Sam; Raj, Arjun bioRxiv : the preprint server for biology 36798299 2023 Feb 10
PNMA2 forms non-enveloped virus-like capsids that trigger paraneoplastic neurological syndrome. Xu, Junjie; Erlendsson, Simon; Singh, Manvendra; Regier, Matthew; Ibiricu, Iosune; Day, Gregory S; Piquet, Amanda L; Clardy, Stacey L; Feschotte, Cedric; Briggs, John A G; Shepherd, Jason D bioRxiv : the preprint server for biology 36798413 2023 Feb 09
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Selective Serotonin Reuptake Inhibitors within Cells: Temporal Resolution in Cytoplasm, Endoplasmic Reticulum, and Membrane. Nichols, Aaron L; Blumenfeld, Zack; Luebbert, Laura; Knox, Hailey J; Muthusamy, Anand K; Marvin, Jonathan S; Kim, Charlene H; Grant, Stephen N; Walton, David P; Cohen, Bruce N; Hammar, Rebekkah; Looger, Loren; Artursson, Per; Dougherty, Dennis A; Lester, The Journal of neuroscience : the official journal of the Society for Neuroscience 36868853 2023 Mar 29
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Structural homology screens reveal poxvirus-encoded proteins impacting inflammasome-mediated defenses. Boys, Ian N; Johnson, Alex G; Quinlan, Meghan; Kranzusch, Philip J; Elde, Nels C bioRxiv : the preprint server for biology 36909515 2023 Apr 03
Four anti-aging drugs and calorie-restricted diet produce parallel effects in fat, brain, muscle, macrophages, and plasma of young mice. Li, Xinna; McPherson, Madaline; Hager, Mary; Lee, Michael; Chang, Peter; Miller, Richard A GeroScience 36920743 2023 Mar 15
The Family of Single-Case Experimental Designs. Epstein, Leonard H; Dallery, Jesse Harvard data science review 36926648 2022
Error-Correction Method for High-Throughput Sizing of Nanoscale Vesicles with Single-Molecule Localization Microscopy. Jung, Seung-Ryoung; Kim, James; Vojtech, Lucia; Vaughan, Joshua C; Chiu, Daniel T The journal of physical chemistry. B 36944080 2023 Mar 30
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Hematopoietic Somatic Mosaicism Is Associated With an Increased Risk of Postoperative Atrial Fibrillation. Ninni, Sandro; Dombrowicz, David; Kuznetsova, Tanya; Vicario, Rocio; Gao, Vance; Molendi-Coste, Olivier; Haas, Joel; Woitrain, Eloise; Coisne, Augustin; Neele, Annette E; Prange, Koen; Willemsen, Lisa; Aghezzaf, Samy; Fragkogianni, Stamatina; Tazibet, Amine; Pineau, Laurent; White, James Robert; Eeckhoute, Jérôme; Koussa, Mohamed; Dubrulle, Henri; Juthier, Francis; Soquet, Jérôme; Vincentelli, André; Edme, Jean-Louis; de Winther, Menno; Geissmann, Frederic; Staels, Bart; Montaigne, David Journal of the American College of Cardiology 36990546 2023 Apr 04
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Stabilizing the return to normal behavior in an epidemic. Berry, Tyrus; Ferrari, Matthew; Sauer, Timothy; Greybush, Steven J; Ebeigbe, Donald; Whalen, Andrew J; Schiff, Steven J medRxiv : the preprint server for health sciences 36993470 2023 May 22
First-in-human immunoPET imaging of COVID-19 convalescent patients using dynamic total-body PET and a CD8-targeted minibody. Omidvari, Negar; Jones, Terry; Price, Pat M; Ferre, April L; Lu, Jacqueline; Abdelhafez, Yasser G; Sen, Fatma; Cohen, Stuart H; Schmiedehausen, Kristin; Badawi, Ramsey D; Shacklett, Barbara L; Wilson, Ian; Cherry, Simon R medRxiv : the preprint server for health sciences 36993568 2023 Mar 20
Engineered Escherichia coli for the in situ secretion of therapeutic nanobodies in the gut. Lynch, Jason P; González-Prieto, Coral; Reeves, Analise Z; Bae, Sena; Powale, Urmila; Godbole, Neha P; Tremblay, Jacqueline M; Schmidt, Florian I; Ploegh, Hidde L; Kansra, Vikram; Glickman, Jonathan N; Leong, John M; Shoemaker, Charles B; Garrett, Wendy S Cell host & microbe 37003258 2023 Apr 12
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Total-Body Multiparametric PET Quantification of 18 F-FDG Delivery and Metabolism in the Study of COVID-19 Recovery. Wang, Yiran; Nardo, Lorenzo; Spencer, Benjamin A; Abdelhafez, Yasser G; Li, Elizabeth J; Omidvari, Negar; Chaudhari, Abhijit J; Badawi, Ramsey D; Jones, Terry; Cherry, Simon R; Wang, Guobao medRxiv : the preprint server for health sciences 37034643 2023 Mar 30
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High-Temporal-Resolution Lung Kinetic Modeling Using Total-Body Dynamic PET with Time-Delay and Dispersion Corrections. Wang, Yiran; Spencer, Benjamin A; Schmall, Jeffrey; Li, Elizabeth; Badawi, Ramsey D; Jones, Terry; Cherry, Simon R; Wang, Guobao Journal of nuclear medicine : official publication, Society of Nuclear Medicine 37116916 2023 Jul
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Sex-Specific Effects of Anxiety on Cognition and Activity-Dependent Neural Networks: Insights from (Female) Mice and (Wo)Men. Hunsberger, Holly C; Lee, Seonjoo; Jin, Michelle; Lanio, Marcos; Whye, Alicia; Cha, Jiook; Scarlata, Miranda; Jayaseelan, Keerthana; Denny, Christine A bioRxiv : the preprint server for biology 37503264 2023 Jul 10
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Total-Body Multiparametric PET Quantification of 18F-FDG Delivery and Metabolism in the Study of Coronavirus Disease 2019 Recovery. Wang, Yiran; Nardo, Lorenzo; Spencer, Benjamin A; Abdelhafez, Yasser G; Li, Elizabeth J; Omidvari, Negar; Chaudhari, Abhijit J; Badawi, Ramsey D; Jones, Terry; Cherry, Simon R; Wang, Guobao Journal of nuclear medicine : official publication, Society of Nuclear Medicine 37591539 2023 Nov
The DECON pilot project investigates predictive markers for successful bariatric surgery. Seifert, Gabriel; Fagnocchi, Luca; Edozie, Michael; Herrmann, Stephan; Baumann, Hannah; Panzeri, Ilaria; Mewes, Stephanie; Aicher, David; Runkel, Mira; Lässle, Claudia; Fink, Jodok; Marjanovic, Goran; Fichtner-Feigl, Stephan; Pospisilik, J Andrew Scientific reports 37591977 2023 Aug 17
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A Series of Virtual Interventions for Chronic Lower Back Pain: A Feasibility Pilot Study for a Series of Personalized (N-of-1) Trials. Butler, Mark; D'Angelo, Stefani; Kaplan, Melissa; Tashnim, Zarrin; Miller, Danielle; Ahn, Heejoon; Falzon, Louise; Dominello, Andrew J; Foroughi, Cirrus; Chandereng, Thevaa; Cheung, Ken; Davidson, Karina Harvard data science review 37609556 2022
Design of 8-mer peptides that block Clostridioides difficile toxin A in intestinal cells. Sarma, Sudeep; Catella, Carly M; San Pedro, Ellyce T; Xiao, Xingqing; Durmusoglu, Deniz; Menegatti, Stefano; Crook, Nathan; Magness, Scott T; Hall, Carol K Communications biology 37634026 2023 Aug 26
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Antibodies Expand the Scope of Angiotensin Receptor Pharmacology. Skiba, Meredith A; Sterling, Sarah M; Rawson, Shaun; Gilman, Morgan S A; Xu, Huixin; Nemeth, Genevieve R; Hurley, Joseph D; Shen, Pengxiang; Staus, Dean P; Kim, Jihee; McMahon, Conor; Lehtinen, Maria K; Wingler, Laura M; Kruse, Andrew C bioRxiv : the preprint server for biology 37662341 2023 Aug 24
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Corrigendum to "Expanding the rumen Prevotella collection: the description of Prevotella communis, sp. nov. of ovine origin" [Syst. Appl. Microbiol. 46(4) (2023) 126437]. Grabner, Eva; Stare, Eva; Fanedl, Lijana; Zorec, Maša; Jones, Dakota S; Johnston, Christopher D; Avguštin, Gorazd; Accetto, Tomaž Systematic and applied microbiology 37669882 2023 Sep
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A Series of Personalized Virtual Light Therapy Interventions for Fatigue: Feasibility Randomized Crossover Trial for N-of-1 Treatment. Butler, Mark; D'Angelo, Stefani; Ahn, Heejoon; Chandereng, Thevaa; Miller, Danielle; Perrin, Alexandra; Romain, Anne-Marie N; Scatoni, Ava; Friel, Ciaran P; Cheung, Ying-Kuen; Davidson, Karina W JMIR formative research 37721795 2023 Sep 18
Developmental priming of cancer susceptibility. Panzeri, Ilaria; Fagnocchi, Luca; Apostle, Stefanos; Tompkins, Megan; Wolfrum, Emily; Madaj, Zachary; Hostetter, Galen; Liu, Yanqing; Schaefer, Kristen; Chih-Hsiang, Yang; Bergsma, Alexis; Drougard, Anne; Dror, Erez; PERMUTE; Chandler, Darrell; Schramek, Daniel; Triche Jr, Timothy J; Pospisilik, J Andrew bioRxiv : the preprint server for biology 37745326 2023 Sep 15
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Early-onset Colon Cancer Shows a Distinct Intestinal Microbiome and a Host-Microbe Interaction. Adnan, Darbaz; Trinh, Jonathan Q; Sharma, Deepak; Alsayid, Muhammad; Bishehsari, Faraz Cancer prevention research (Philadelphia, Pa.) 37967575 2024 Jan 04
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