Glycoscience
Glycoscience
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The search results on this publication page are automated on a monthly schedule based on acknowledgement of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.
| Title | Author | Journal Name | PubMedID | Journal Abbreviation | Publication Date | PubMedLink |
|---|---|---|---|---|---|---|
| Iron(iii) chloride-catalyzed activation of glycosyl chlorides. | Geringer SA, Demchenko AV | Organic & biomolecular chemistry | 30430182 | Org Biomol Chem | 2018 Dec 5 | https://www.ncbi.nlm.nih.gov/pubmed/30430182 |
| HPLC-assisted automated oligosaccharide synthesis: the implementation of the two-way split valve as a mode of complete automation. | Panza M, Stine KJ, Demchenko AV | Chemical communications (Cambridge, England) | 31930269 | Chem Commun (Camb) | 2020 Jan 28 | https://www.ncbi.nlm.nih.gov/pubmed/31930269 |
| Investigation of Glycosyl Nitrates as Building Blocks for Chemical Glycosylation. | Wang T, Singh Y, Stine KJ, Demchenko AV | European journal of organic chemistry | 31341403 | European J Org Chem | 2018 Dec 19 | https://www.ncbi.nlm.nih.gov/pubmed/31341403 |
| Triflic acid-mediated synthesis of thioglycosides. | Escopy S, Singh Y, Demchenko AV | Organic & biomolecular chemistry | 31490529 | Org Biomol Chem | 2019 Sep 28 | https://www.ncbi.nlm.nih.gov/pubmed/31490529 |
| The chemical synthesis of human milk oligosaccharides: Lacto-N-tetraose (Galβ1→3GlcNAcβ1→3Galβ1→4Glc). | Bandara MD, Stine KJ, Demchenko AV | Carbohydrate research | 31585319 | Carbohydr Res | 2019 Dec 1 | https://www.ncbi.nlm.nih.gov/pubmed/31585319 |
| Glycosyl nitrates in synthesis: streamlined access to glucopyranose building blocks differentiated at C-2. | Wang T, Nigudkar SS, Yasomanee JP, Rath NP, Stine KJ, Demchenko AV | Organic & biomolecular chemistry | 29693690 | Org Biomol Chem | 2018 May 15 | https://www.ncbi.nlm.nih.gov/pubmed/29693690 |
| Intramolecular glycosylation. | Jia XG, Demchenko AV | Beilstein journal of organic chemistry | 29062425 | Beilstein J Org Chem | 2017 | https://www.ncbi.nlm.nih.gov/pubmed/29062425 |
| Investigation of the H-bond-mediated aglycone delivery reaction in application to the synthesis of β-glucosides. | Mannino MP, Yasomanee JP, Demchenko AV | Carbohydrate research | 30286335 | Carbohydr Res | 2018 Dec | https://www.ncbi.nlm.nih.gov/pubmed/30286335 |
| Facile and robust methods for the regioselective acylation of N-acetylneuraminic acid. | Shadrick M, Yu C, Geringer S, Ritter S, Behm A, Cox A, Lohman M, De Meo C | New journal of chemistry = Nouveau journal de chimie | 30147293 | New J Chem | 2018 Sep 7 | https://www.ncbi.nlm.nih.gov/pubmed/30147293 |
| Application of Porous Materials to Carbohydrate Chemistry and Glycoscience. | Stine KJ | Advances in carbohydrate chemistry and biochemistry | 29173727 | Adv Carbohydr Chem Biochem | 2017 | https://www.ncbi.nlm.nih.gov/pubmed/29173727 |
| Extending the S-benzimidazolyl (SBiz) platform: N-alkylated SBiz glycosyl donors with the universal activation profile. | Hasty SJ, Rath NP, Demchenko AV | Pure and applied chemistry. Chimie pure et appliquee | 29861508 | Pure Appl Chem | 2017 Sep | https://www.ncbi.nlm.nih.gov/pubmed/29861508 |
| Automated Chemical Oligosaccharide Synthesis: Novel Approach to Traditional Challenges. | Panza M, Pistorio SG, Stine KJ, Demchenko AV | Chemical reviews | 29953217 | Chem Rev | 2018 Sep 12 | https://www.ncbi.nlm.nih.gov/pubmed/29953217 |
| OFox imidates as versatile glycosyl donors for chemical glycosylation. | Nigudkar SS, Wang T, Pistorio SG, Yasomanee JP, Stine KJ, Demchenko AV | Organic & biomolecular chemistry | 27808325 | Org Biomol Chem | 2017 Jan 4 | https://www.ncbi.nlm.nih.gov/pubmed/27808325 |
| Manual and Automated Syntheses of the N-Linked Glycoprotein Core Glycans. | Pistorio SG, Geringer SA, Stine KJ, Demchenko AV | The Journal of organic chemistry | 31066275 | J Org Chem | 2019 Jun 7 | https://www.ncbi.nlm.nih.gov/pubmed/31066275 |
| Chemical synthesis of human milk oligosaccharides: lacto-N-neohexaose (Galβ1 → 4GlcNAcβ1→)(2) 3,6Galβ1 → 4Glc. | Bandara MD, Stine KJ, Demchenko AV | Organic & biomolecular chemistry | 32048706 | Org Biomol Chem | 2020 Mar 4 | https://www.ncbi.nlm.nih.gov/pubmed/32048706 |
| A pH sensitive thiolated β-cyclodextrin-modified nanoporous gold for controlled release of doxorubicin. | Neupane D, Bhattarai JK, Demchenko AV, Stine KJ | Journal of drug delivery science and technology | 32922527 | J Drug Deliv Sci Technol | 2020 Dec | https://www.ncbi.nlm.nih.gov/pubmed/32922527 |
| The development of a dedicated polymer support for the solid-phase oligosaccharide synthesis. | Panza M , Neupane D , Stine KJ , Demchenko AV | Chemical communications (Cambridge, England) | 32785304 | Chem Commun (Camb) | 2020 Sep 16 | https://www.ncbi.nlm.nih.gov/pubmed/32785304 |
| Comparative Study on the Effects of Picoloyl Groups in Sialylations Based on Their Substitution Pattern. | Jones B, Behm A, Shadrick M, Geringer SA, Escopy S, Lohman M, De Meo C | The Journal of organic chemistry | 31718181 | J Org Chem | 2019 Dec 6 | https://www.ncbi.nlm.nih.gov/pubmed/31718181 |
| Regenerative Glycosylation. | Singh Y, Wang T, Geringer SA, Stine KJ, Demchenko AV | The Journal of organic chemistry | 29227649 | J Org Chem | 2018 Jan 5 | https://www.ncbi.nlm.nih.gov/pubmed/29227649 |
| A Streamlined Regenerative Glycosylation Reaction: Direct, Acid-Free Activation of Thioglycosides. | Escopy S, Singh Y, Stine KJ, Demchenko AV | Chemistry (Weinheim an der Bergstrasse, Germany) | 32804435 | Chemistry | 2021 Jan 4 | https://www.ncbi.nlm.nih.gov/pubmed/32804435 |
| HPLC-Assisted Automated Oligosaccharide Synthesis: Implementation of the Autosampler as a Mode of the Reagent Delivery. | Pistorio SG, Nigudkar SS, Stine KJ, Demchenko AV | The Journal of organic chemistry | 27575052 | J Org Chem | 2016 Oct 7 | https://www.ncbi.nlm.nih.gov/pubmed/27575052 |
| Koenigs-Knorr Glycosylation Reaction Catalyzed by Trimethylsilyl Trifluoromethanesulfonate. | Singh Y, Demchenko AV | Chemistry (Weinheim an der Bergstrasse, Germany) | 30407673 | Chemistry | 2019 Jan 28 | https://www.ncbi.nlm.nih.gov/pubmed/30407673 |
| The chemical synthesis of human milk oligosaccharides: Lacto-N-neotetraose (Galβ1→4GlcNAcβ1→3Galβ1→4Glc). | Bandara MD, Stine KJ, Demchenko AV | Carbohydrate research | 31319351 | Carbohydr Res | 2019 Sep 1 | https://www.ncbi.nlm.nih.gov/pubmed/31319351 |
| Chemical Synthesis of Human Milk Oligosaccharides: Lacto-N-hexaose Galβ1→3GlcNAcβ1→3 [Galβ1→4GlcNAcβ1→6] Galβ1→4Glc. | Bandara MD, Stine KJ, Demchenko AV | The Journal of organic chemistry | 31749363 | J Org Chem | 2019 Dec 20 | https://www.ncbi.nlm.nih.gov/pubmed/31749363 |
| HPLC-Based Automated Synthesis and Purification of Carbohydrates. | Kashiwagi GA, Petrosilli L, Escopy S, Lay L, Stine KJ, De Meo C, Demchenko AV | Chemistry (Weinheim an der Bergstrasse, Germany) | 38684455 | Chemistry | 2024 Aug 1 | https://www.ncbi.nlm.nih.gov/pubmed/38684455 |
| Synthesis of 2-azido-2-deoxy- and 2-acetamido-2-deoxy-D-manno derivatives as versatile building blocks. | Alex C, Visansirikul S, Zhang Y, Yasomanee JP, Codee J, Demchenko AV | Carbohydrate research | 31901454 | Carbohydr Res | 2020 Feb | https://www.ncbi.nlm.nih.gov/pubmed/31901454 |
| Immobilization of glycans on solid surfaces for application in glycomics. | O'Neil CL, Stine KJ, Demchenko AV | Journal of carbohydrate chemistry | 30505067 | J Carbohydr Chem | 2018 | https://www.ncbi.nlm.nih.gov/pubmed/30505067 |
| Bromine-Promoted Glycosidation of Conformationally Superarmed Thioglycosides. | Panza M, Civera M, Yasomanee JP, Belvisi L, Demchenko AV | Chemistry (Weinheim an der Bergstrasse, Germany) | 31286579 | Chemistry | 2019 Sep 12 | https://www.ncbi.nlm.nih.gov/pubmed/31286579 |
| Synthesis of carbohydrate building blocks via regioselective uniform protection/deprotection strategies. | Wang T, Demchenko AV | Organic & biomolecular chemistry | 31044205 | Org Biomol Chem | 2019 May 28 | https://www.ncbi.nlm.nih.gov/pubmed/31044205 |
| Biochemical characterization of Helicobacter pylori α1-3-fucosyltransferase and its application in the synthesis of fucosylated human milk oligosaccharides. | Bai J, Wu Z, Sugiarto G, Gadi MR, Yu H, Li Y, Xiao C, Ngo A, Zhao B, Chen X, Guan W | Carbohydrate research | 31132553 | Carbohydr Res | 2019 Jul 1 | https://www.ncbi.nlm.nih.gov/pubmed/31132553 |
| Regioselective One-Pot Multienzyme (OPME) Chemoenzymatic Strategies for Systematic Synthesis of Sialyl Core 2 Glycans. | Santra A, Li Y, Ghosh T, Li R, Yu H, Chen X | ACS catalysis | 31304048 | ACS Catal | 2019 Jan 4 | https://www.ncbi.nlm.nih.gov/pubmed/31304048 |
| One-pot multienzyme (OPME) chemoenzymatic synthesis of brain ganglioside glycans with human ST3GAL II expressed in E. coli. | Yang X, Yu H, Yang X, Kooner AS, Yuan Y, Luu B, Chen X | ChemCatChem | 35784007 | ChemCatChem | 2022 Jan 21 | https://www.ncbi.nlm.nih.gov/pubmed/35784007 |
| Recent progress in synthesis of carbohydrates with sugar nucleotide-dependent glycosyltransferases. | Na L, Li R, Chen X | Current opinion in chemical biology | 33310623 | Curr Opin Chem Biol | 2021 Apr | https://www.ncbi.nlm.nih.gov/pubmed/33310623 |
| Strategies for chemoenzymatic synthesis of carbohydrates. | Li W, McArthur JB, Chen X | Carbohydrate research | 30529493 | Carbohydr Res | 2019 Jan 15 | https://www.ncbi.nlm.nih.gov/pubmed/30529493 |
| Chemoenzymatic synthesis of para-nitrophenol (pNP)-tagged α2-8-sialosides and high-throughput substrate specificity studies of α2-8-sialidases. | Tasnima N, Yu H, Li Y, Santra A, Chen X | Organic & biomolecular chemistry | 27924345 | Org Biomol Chem | 2016 Dec 20 | https://www.ncbi.nlm.nih.gov/pubmed/27924345 |
| Synthesis of N-Glycolylneuraminic Acid (Neu5Gc) and Its Glycosides. | Kooner AS, Yu H, Chen X | Frontiers in immunology | 31555264 | Front Immunol | 2019 | https://www.ncbi.nlm.nih.gov/pubmed/31555264 |
| A Bacterial β1-3-Galactosyltransferase Enables Multigram-Scale Synthesis of Human Milk Lacto-N-tetraose (LNT) and Its Fucosides. | McArthur JB, Yu H, Chen X | ACS catalysis | 33408950 | ACS Catal | 2019 Dec 6 | https://www.ncbi.nlm.nih.gov/pubmed/33408950 |
| Catalytic Cycle of Neisseria meningitidis CMP-Sialic Acid Synthetase Illustrated by High-Resolution Protein Crystallography. | Matthews MM, McArthur JB, Li Y, Yu H, Chen X, Fisher AJ | Biochemistry | 31583886 | Biochemistry | 2020 Sep 1 | https://www.ncbi.nlm.nih.gov/pubmed/31583886 |
| H. pylori α1-3/4-fucosyltransferase (Hp3/4FT)-catalyzed one-pot multienzyme (OPME) synthesis of Lewis antigens and human milk fucosides. | Yu H, Li Y, Wu Z, Li L, Zeng J, Zhao C, Wu Y, Tasnima N, Wang J, Liu H, Gadi MR, Guan W, Wang PG, Chen X | Chemical communications (Cambridge, England) | 28936496 | Chem Commun (Camb) | 2017 Oct 5 | https://www.ncbi.nlm.nih.gov/pubmed/28936496 |
| Substrate and Process Engineering for Biocatalytic Synthesis and Facile Purification of Human Milk Oligosaccharides. | Bai Y, Yang X, Yu H, Chen X | ChemSusChem | 35100486 | ChemSusChem | 2022 May 6 | https://www.ncbi.nlm.nih.gov/pubmed/35100486 |
| Recent progress in chemical synthesis of bacterial surface glycans. | Li R, Yu H, Chen X | Current opinion in chemical biology | 32920523 | Curr Opin Chem Biol | 2020 Oct | https://www.ncbi.nlm.nih.gov/pubmed/32920523 |
| Chemoenzymatic Synthesis and Facile Purification of Gangliosides. | Bai Y, Yu H, Chen X | Current protocols | 33760402 | Curr Protoc | 2021 Mar | https://www.ncbi.nlm.nih.gov/pubmed/33760402 |
| Converting Pasteurella multocidaα2-3-sialyltransferase 1 (PmST1) to a regioselective α2-6-sialyltransferase by saturation mutagenesis and regioselective screening. | McArthur JB, Yu H, Zeng J, Chen X | Organic & biomolecular chemistry | 28134951 | Org Biomol Chem | 2017 Feb 21 | https://www.ncbi.nlm.nih.gov/pubmed/28134951 |
| Highly efficient chemoenzymatic synthesis and facile purification of α-Gal pentasaccharyl ceramide Galα3nLc(4)βCer. | Santra A, Li Y, Yu H, Slack TJ, Wang PG, Chen X | Chemical communications (Cambridge, England) | 28695219 | Chem Commun (Camb) | 2017 Jul 20 | https://www.ncbi.nlm.nih.gov/pubmed/28695219 |
| Chemoenzymatic synthesis of Neu5Ac9NAc-containing α2-3- and α2-6-linked sialosides and their use for sialidase substrate specificity studies. | Li W, Xiao A, Li Y, Yu H, Chen X | Carbohydrate research | 28961426 | Carbohydr Res | 2017 Nov 8 | https://www.ncbi.nlm.nih.gov/pubmed/28961426 |
| Facile chemoenzymatic synthesis of Lewis a (Le(a)) antigen in gram-scale and sialyl Lewis a (sLe(a)) antigens containing diverse sialic acid forms. | Tasnima N, Yu H, Yan X, Li W, Xiao A, Chen X | Carbohydrate research | 30562693 | Carbohydr Res | 2019 Jan 15 | https://www.ncbi.nlm.nih.gov/pubmed/30562693 |
| Streamlined chemoenzymatic total synthesis of prioritized ganglioside cancer antigens. | Yu H, Santra A, Li Y, McArthur JB, Ghosh T, Yang X, Wang PG, Chen X | Organic & biomolecular chemistry | 29789847 | Org Biomol Chem | 2018 Jun 6 | https://www.ncbi.nlm.nih.gov/pubmed/29789847 |
| Process Engineering and Glycosyltransferase Improvement for Short Route Chemoenzymatic Total Synthesis of GM1 Gangliosides. | Yu H, Zhang L, Yang X, Bai Y, Chen X | Chemistry (Weinheim an der Bergstrasse, Germany) | 36596720 | Chemistry | 2023 May 2 | https://www.ncbi.nlm.nih.gov/pubmed/36596720 |
| Chemoenzymatic Synthesis of N-Acetyl Analogues of 9-O-Acetylated b-Series Gangliosides. | Yu H, Zheng Z, Zhang L, Yang X, Varki A, Chen X | Tetrahedron | 37981995 | Tetrahedron | 2023 Aug 3 | https://www.ncbi.nlm.nih.gov/pubmed/37981995 |
| Sialidase-catalyzed one-pot multienzyme (OPME) synthesis of sialidase transition-state analogue inhibitors. | Xiao A, Li Y, Li X, Santra A, Yu H, Li W, Chen X | ACS catalysis | 29713561 | ACS Catal | 2018 Jan 5 | https://www.ncbi.nlm.nih.gov/pubmed/29713561 |
| Chemoenzymatic Total Synthesis of GM3 Gangliosides Containing Different Sialic Acid Forms and Various Fatty Acyl Chains. | Yu H, Gadi MR, Bai Y, Zhang L, Li L, Yin J, Wang PG, Chen X | The Journal of organic chemistry | 34152144 | J Org Chem | 2021 Jul 2 | https://www.ncbi.nlm.nih.gov/pubmed/34152144 |
| Directed Evolution of Therapeutic Antibodies Targeting Glycosylation in Cancer. | Amon R, Rosenfeld R, Perlmutter S, Grant OC, Yehuda S, Borenstein-Katz A, Alcalay R, Marshanski T, Yu H, Diskin R, Woods RJ, Chen X, Padler-Karavani V | Cancers | 33007970 | Cancers (Basel) | 2020 Sep 30 | https://www.ncbi.nlm.nih.gov/pubmed/33007970 |
| Methods for 2-Deoxyglycoside Synthesis. | Bennett CS, Galan MC | Chemical reviews | 29953219 | Chem Rev | 2018 Sep 12 | https://www.ncbi.nlm.nih.gov/pubmed/29953219 |
| Versatile Glycosyl Sulfonates in β-Selective C-Glycosylation. | Ling J, Bennett CS | Angewandte Chemie (International ed. in English) | 31880395 | Angew Chem Int Ed Engl | 2020 Mar 9 | https://www.ncbi.nlm.nih.gov/pubmed/31880395 |
| Recent Developments in Stereoselective Chemical Glycosylation. | Ling J, Bennett CS | Asian journal of organic chemistry | 31534883 | Asian J Org Chem | 2019 Jun | https://www.ncbi.nlm.nih.gov/pubmed/31534883 |
| An Improved Approach to the Direct Construction of 2-Deoxy-β-Linked Sugars: Applications to Oligosaccharide Synthesis. | Lloyd D, Bennett CS | Chemistry (Weinheim an der Bergstrasse, Germany) | 29572995 | Chemistry | 2018 May 28 | https://www.ncbi.nlm.nih.gov/pubmed/29572995 |
| Modular continuous flow synthesis of orthogonally protected 6-deoxy glucose glycals. | Yalamanchili S, Nguyen TV, Pohl NLB, Bennett CS | Organic & biomolecular chemistry | 32293636 | Org Biomol Chem | 2020 May 6 | https://www.ncbi.nlm.nih.gov/pubmed/32293636 |
| Automated, Multistep Continuous-Flow Synthesis of 2,6-Dideoxy and 3-Amino-2,3,6-trideoxy Monosaccharide Building Blocks. | Yalamanchili S, Nguyen TA, Zsikla A, Stamper G, DeYong AE, Florek J, Vasquez O, Pohl NLB, Bennett CS | Angewandte Chemie (International ed. in English) | 34463017 | Angew Chem Int Ed Engl | 2021 Oct 18 | https://www.ncbi.nlm.nih.gov/pubmed/34463017 |
| Reagent-Controlled α-Selective Dehydrative Glycosylation of 2,6-Dideoxy Sugars: Construction of the Arugomycin Tetrasaccharide. | Romeo JR, McDermott L, Bennett CS | Organic letters | 32281384 | Org Lett | 2020 May 1 | https://www.ncbi.nlm.nih.gov/pubmed/32281384 |
| Reagent Controlled Direct Dehydrative Glycosylation with 2-Deoxy Sugars: Construction of the Saquayamycin Z Pentasaccharide. | Mizia JC, Bennett CS | Organic letters | 31305082 | Org Lett | 2019 Aug 2 | https://www.ncbi.nlm.nih.gov/pubmed/31305082 |
| Challenges in the Conversion of Manual Processes to Machine-Assisted Syntheses: Activation of Thioglycoside Donors with Aryl(trifluoroethyl)iodonium Triflimide. | Saliba RC, Wooke ZJ, Nieves GA, Chu AA, Bennett CS, Pohl NLB | Organic letters | 29336575 | Org Lett | 2018 Feb 2 | https://www.ncbi.nlm.nih.gov/pubmed/29336575 |
| Rapid de Novo Preparation of 2,6-Dideoxy Sugar Libraries through Gold-Catalyzed Homopropargyl Orthoester Cyclization. | Yalamanchili S, Miller W, Chen X, Bennett CS | Organic letters | 31755271 | Org Lett | 2019 Dec 6 | https://www.ncbi.nlm.nih.gov/pubmed/31755271 |
| Glycosyl Sulfonates Beyond Triflates. | Bennett CS | Chemical record (New York, N.Y.) | 34142755 | Chem Rec | 2021 Nov | https://www.ncbi.nlm.nih.gov/pubmed/34142755 |
| Matching Glycosyl Donor Reactivity to Sulfonate Leaving Group Ability Permits S(N)2 Glycosylations. | Zhuo MH, Wilbur DJ, Kwan EE, Bennett CS | Journal of the American Chemical Society | 31550879 | J Am Chem Soc | 2019 Oct 23 | https://www.ncbi.nlm.nih.gov/pubmed/31550879 |
| Synthesis of the Hexasaccharide Fragment of Landomycin A Using a Mild, Reagent-Controlled Approach. | Yalamanchili S, Lloyd D, Bennett CS | Organic letters | 31021647 | Org Lett | 2019 May 17 | https://www.ncbi.nlm.nih.gov/pubmed/31021647 |
| Expanding Glycomic Investigations through Thiol-Derivatized Glycans. | Hurst RD, Nieves A, Brichacek M | Molecules (Basel, Switzerland) | 36838944 | Molecules | 2023 Feb 18 | https://www.ncbi.nlm.nih.gov/pubmed/36838944 |
| Transformation of aldehydes into nitriles in an aqueous medium using O-phenylhydroxylamine as the nitrogen source. | Cheewawisuttichai T, Hurst RD, Brichacek M | Carbohydrate research | 33761407 | Carbohydr Res | 2021 Apr | https://www.ncbi.nlm.nih.gov/pubmed/33761407 |
| Development of a multifunctional neoglycoside auxiliary for applications in glycomics research. | Cheewawisuttichai T, Brichacek M | Organic & biomolecular chemistry | 34264248 | Org Biomol Chem | 2021 Aug 5 | https://www.ncbi.nlm.nih.gov/pubmed/34264248 |
| Streamlining the chemoenzymatic synthesis of complex N-glycans by a stop and go strategy. | Liu L, Prudden AR, Capicciotti CJ, Bosman GP, Yang JY, Chapla DG, Moremen KW, Boons GJ | Nature chemistry | 30532014 | Nat Chem | 2019 Feb | https://www.ncbi.nlm.nih.gov/pubmed/30532014 |
| Emerging structural insights into glycosyltransferase-mediated synthesis of glycans. | Moremen KW, Haltiwanger RS | Nature chemical biology | 31427814 | Nat Chem Biol | 2019 Sep | https://www.ncbi.nlm.nih.gov/pubmed/31427814 |
| Chemoenzymatic Synthesis of Asymmetrical Multi-Antennary N-Glycans to Dissect Glycan-Mediated Interactions between Human Sperm and Oocytes. | Chinoy ZS, Friscourt F, Capicciotti CJ, Chiu P, Boons GJ | Chemistry (Weinheim an der Bergstrasse, Germany) | 29603480 | Chemistry | 2018 Jun 4 | https://www.ncbi.nlm.nih.gov/pubmed/29603480 |
| Glycan remodeled erythrocytes facilitate antigenic characterization of recent A/H3N2 influenza viruses. | Broszeit F, van Beek RJ, Unione L, Bestebroer TM, Chapla D, Yang JY, Moremen KW, Herfst S, Fouchier RAM, de Vries RP, Boons GJ | Nature communications | 34521834 | Nat Commun | 2021 Sep 14 | https://www.ncbi.nlm.nih.gov/pubmed/34521834 |
| Improved isolation and characterization procedure of sialylglycopeptide from egg yolk powder. | Liu L, Prudden AR, Bosman GP, Boons GJ | Carbohydrate research | 29096185 | Carbohydr Res | 2017 Nov 27 | https://www.ncbi.nlm.nih.gov/pubmed/29096185 |
| An automated platform for the enzyme-mediated assembly of complex oligosaccharides. | Li T, Liu L, Wei N, Yang JY, Chapla DG, Moremen KW, Boons GJ | Nature chemistry | 30792508 | Nat Chem | 2019 Mar | https://www.ncbi.nlm.nih.gov/pubmed/30792508 |
| Chemoenzymatic Synthesis of Campylobacter jejuni Lipo-oligosaccharide Core Domains to Examine Guillain-Barré Syndrome Serum Antibody Specificities. | Li T, Wolfert MA, Wei N, Huizinga R, Jacobs BC, Boons GJ | Journal of the American Chemical Society | 33164488 | J Am Chem Soc | 2020 Nov 18 | https://www.ncbi.nlm.nih.gov/pubmed/33164488 |
| Guillain-Barré syndrome: expanding the concept of molecular mimicry. | Laman JD, Huizinga R, Boons GJ, Jacobs BC | Trends in immunology | 35256276 | Trends Immunol | 2022 Apr | https://www.ncbi.nlm.nih.gov/pubmed/35256276 |
| Appropriate aglycone modification significantly expands the glycan substrate acceptability of α1,6-fucosyltransferase (FUT8). | Zhang R, Yang Q, Boruah BM, Zong G, Li C, Chapla D, Yang JY, Moremen KW, Wang LX | The Biochemical journal | 33734311 | Biochem J | 2021 Apr 30 | https://www.ncbi.nlm.nih.gov/pubmed/33734311 |
| Chemoenzymatic Tagging of Tn/TF/STF Antigens in Living Systems. | Yang Y, Chen M, Wu M, Hong S, Gao B, Liu Y, Yu C, Young TS, Chapla DG, Yang JY, Cappiello JR, Li JP, Sharpless KB, Moremen KW, Wu P | Israel journal of chemistry | 38737670 | Isr J Chem | 2023 Oct | https://www.ncbi.nlm.nih.gov/pubmed/38737670 |
| Phenanthroline-Catalyzed Stereoselective Formation of α-1,2-cis 2-Deoxy-2-Fluoro Glycosides. | DeMent PM, Liu C, Wakpal J, Schaugaard RN, Schlegel HB, Nguyen HM | ACS catalysis | 34336371 | ACS Catal | 2021 Feb 19 | https://www.ncbi.nlm.nih.gov/pubmed/34336371 |
| Enantio- and Diastereoselective Synthesis of Hydroxy Bis(boronates) via Cu-Catalyzed Tandem Borylation/1,2-Addition. | Green JC, Joannou MV, Murray SA, Zanghi JM, Meek SJ | ACS catalysis | 29520326 | ACS Catal | 2017 | https://www.ncbi.nlm.nih.gov/pubmed/29520326 |
| Diastereoselective sp(3) C-O Bond Formation via Visible Light-Induced, Copper-Catalyzed Cross-Couplings of Glycosyl Bromides with Aliphatic Alcohols. | Yu F, Dickson JL, Loka RS, Xu H, Schaugaard RN, Schlegel HB, Luo L, Nguyen HM | ACS catalysis | 34168901 | ACS Catal | 2020 Jun 5 | https://www.ncbi.nlm.nih.gov/pubmed/34168901 |
| Phenanthroline-Catalyzed Stereoretentive Glycosylations. | Yu F, Li J, DeMent PM, Tu YJ, Schlegel HB, Nguyen HM | Angewandte Chemie (International ed. in English) | 30920099 | Angew Chem Int Ed Engl | 2019 May 20 | https://www.ncbi.nlm.nih.gov/pubmed/30920099 |
| Identification of the binding roles of terminal and internal glycan epitopes using enzymatically synthesized N-glycans containing tandem epitopes. | Wu Z, Liu Y, Ma C, Li L, Bai J, Byrd-Leotis L, Lasanajak Y, Guo Y, Wen L, Zhu H, Song J, Li Y, Steinhauer DA, Smith DF, Zhao B, Chen X, Guan W, Wang PG | Organic & biomolecular chemistry | 27752690 | Org Biomol Chem | 2016 Nov 29 | https://www.ncbi.nlm.nih.gov/pubmed/27752690 |
| Site-Directed Glycosylation of Peptide/Protein with Homogeneous O-Linked Eukaryotic N-Glycans. | Wu Z, Jiang K, Zhu H, Ma C, Yu Z, Li L, Guan W, Liu Y, Zhu H, Chen Y, Li S, Li J, Cheng J, Zhang L, Wang PG | Bioconjugate chemistry | 27529638 | Bioconjug Chem | 2016 Sep 21 | https://www.ncbi.nlm.nih.gov/pubmed/27529638 |
| Chemoenzymatic Synthesis of a Library of Human Milk Oligosaccharides. | Xiao Z, Guo Y, Liu Y, Li L, Zhang Q, Wen L, Wang X, Kondengaden SM, Wu Z, Zhou J, Cao X, Li X, Ma C, Wang PG | The Journal of organic chemistry | 27305319 | J Org Chem | 2016 Jul 15 | https://www.ncbi.nlm.nih.gov/pubmed/27305319 |
| A One-Step Chemoenzymatic Labeling Strategy for Probing Sialylated Thomsen-Friedenreich Antigen. | Wen L, Liu D, Zheng Y, Huang K, Cao X, Song J, Wang PG | ACS central science | 29721527 | ACS Cent Sci | 2018 Apr 25 | https://www.ncbi.nlm.nih.gov/pubmed/29721527 |
| Facile Chemoenzymatic Synthesis of O-Mannosyl Glycans. | Wang S, Zhang Q, Chen C, Guo Y, Gadi MR, Yu J, Westerlind U, Liu Y, Cao X, Wang PG, Li L | Angewandte Chemie (International ed. in English) | 29732660 | Angew Chem Int Ed Engl | 2018 Jul 20 | https://www.ncbi.nlm.nih.gov/pubmed/29732660 |
| Sialic acid linkage-specific permethylation for improved profiling of protein glycosylation by MALDI-TOF MS. | Jiang K, Zhu H, Li L, Guo Y, Gashash E, Ma C, Sun X, Li J, Zhang L, Wang PG | Analytica chimica acta | 28693729 | Anal Chim Acta | 2017 Aug 15 | https://www.ncbi.nlm.nih.gov/pubmed/28693729 |
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| The Sweet-Side of Leukocytes: Galectins as Master Regulators of Neutrophil Function. | Robinson BS, Arthur CM, Evavold B, Roback E, Kamili NA, Stowell CS, Vallecillo-Zúniga ML, Van Ry PM, Dias-Baruffi M, Cummings RD, Stowell SR | Frontiers in immunology | 31440233 | Front Immunol | 2019 | https://www.ncbi.nlm.nih.gov/pubmed/31440233 |
| The role of galectins in immunity and infection. | Liu FT, Stowell SR | Nature reviews. Immunology | 36646848 | Nat Rev Immunol | 2023 Aug | https://www.ncbi.nlm.nih.gov/pubmed/36646848 |
| Alkylation of Galectin-1 with Iodoacetamide and Mass Spectrometric Mapping of the Sites of Incorporation. | Wu SC, Paul A, Cummings RD, Feasley CL, Arthur CM, Stowell SR | Methods in molecular biology (Clifton, N.J.) | 35320520 | Methods Mol Biol | 2022 | https://www.ncbi.nlm.nih.gov/pubmed/35320520 |
| Method for Identifying Galectin Ligands on Lymphocyte Membrane Glycoproteins. | Patel KR, Barb AW, Stowell SR | Methods in molecular biology (Clifton, N.J.) | 35320529 | Methods Mol Biol | 2022 | https://www.ncbi.nlm.nih.gov/pubmed/35320529 |
| Generation and Use of Recombinant Galectins. | Wu SC, Paul A, Ho A, Patel KR, Allen JWL, Verkerke H, Arthur CM, Stowell SR | Current protocols | 33656274 | Curr Protoc | 2021 Mar | https://www.ncbi.nlm.nih.gov/pubmed/33656274 |
| Multifaceted role of glycosylation in transfusion medicine, platelets, and red blood cells. | Lee-Sundlov MM, Stowell SR, Hoffmeister KM | Journal of thrombosis and haemostasis : JTH | 32350996 | J Thromb Haemost | 2020 Jul | https://www.ncbi.nlm.nih.gov/pubmed/32350996 |
| Whole microbe arrays accurately predict interactions and overall antimicrobial activity of galectin-8 toward distinct strains of Streptococcus pneumoniae. | Wu SC, Jan HM, Vallecillo-Zúniga ML, Rathgeber MF, Stowell CS, Murdock KL, Patel KR, Nakahara H, Stowell CJ, Nahm MH, Arthur CM, Cummings RD, Stowell SR | Scientific reports | 37005394 | Sci Rep | 2023 Apr 1 | https://www.ncbi.nlm.nih.gov/pubmed/37005394 |
| Small Molecule-Activated O-GlcNAcase for Spatiotemporal Removal of O-GlcNAc in Live Cells. | Ge Y, Lu H, Yang B, Woo CM | ACS chemical biology | 36598936 | ACS Chem Biol | 2023 Jan 20 | https://www.ncbi.nlm.nih.gov/pubmed/36598936 |
| Truncation of the TPR domain of OGT alters substrate and glycosite selection. | Ramirez DH, Yang B, D'Souza AK, Shen D, Woo CM | Analytical and bioanalytical chemistry | 34725712 | Anal Bioanal Chem | 2021 Dec | https://www.ncbi.nlm.nih.gov/pubmed/34725712 |
| The Crossroads of Glycoscience, Infection, and Immunology. | McKitrick TR, Ackerman ME, Anthony RM, Bennett CS, Demetriou M, Hudalla GA, Ribbeck K, Ruhl S, Woo CM, Yang L, Zost SJ, Schnaar RL, Doering TL | Frontiers in microbiology | 34646251 | Front Microbiol | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/34646251 |
| Engineering a Proximity-Directed O-GlcNAc Transferase for Selective Protein O-GlcNAcylation in Cells. | Ramirez DH, Aonbangkhen C, Wu HY, Naftaly JA, Tang S, O'Meara TR, Woo CM | ACS chemical biology | 32119511 | ACS Chem Biol | 2020 Apr 17 | https://www.ncbi.nlm.nih.gov/pubmed/32119511 |
| The O-GlcNAc Modification on Kinases. | Schwein PA, Woo CM | ACS chemical biology | 32155042 | ACS Chem Biol | 2020 Mar 20 | https://www.ncbi.nlm.nih.gov/pubmed/32155042 |
| Target protein deglycosylation in living cells by a nanobody-fused split O-GlcNAcase. | Ge Y, Ramirez DH, Yang B, D'Souza AK, Aonbangkhen C, Wong S, Woo CM | Nature chemical biology | 33686291 | Nat Chem Biol | 2021 May | https://www.ncbi.nlm.nih.gov/pubmed/33686291 |
| The schizophrenia-associated variant in SLC39A8 alters protein glycosylation in the mouse brain. | Mealer RG, Williams SE, Noel M, Yang B, D'Souza AK, Nakata T, Graham DB, Creasey EA, Cetinbas M, Sadreyev RI, Scolnick EM, Woo CM, Smoller JW, Xavier RJ, Cummings RD | Molecular psychiatry | 35260802 | Mol Psychiatry | 2022 Mar | https://www.ncbi.nlm.nih.gov/pubmed/35260802 |
| Writing and Erasing O-GlcNAc on Casein Kinase 2 Alpha Alters the Phosphoproteome. | Schwein PA, Ge Y, Yang B, D'Souza A, Mody A, Shen D, Woo CM | ACS chemical biology | 35467332 | ACS Chem Biol | 2022 May 20 | https://www.ncbi.nlm.nih.gov/pubmed/35467332 |
| O-Acetylated Chemical Reporters of Glycosylation Can Display Metabolism-Dependent Background Labeling of Proteins but Are Generally Reliable Tools for the Identification of Glycoproteins. | Darabedian N, Yang B, Ding R, Cutolo G, Zaro BW, Woo CM, Pratt MR | Frontiers in chemistry | 32411667 | Front Chem | 2020 | https://www.ncbi.nlm.nih.gov/pubmed/32411667 |
| Aspartate Residues Far from the Active Site Drive O-GlcNAc Transferase Substrate Selection. | Joiner CM, Levine ZG, Aonbangkhen C, Woo CM, Walker S | Journal of the American Chemical Society | 31373491 | J Am Chem Soc | 2019 Aug 21 | https://www.ncbi.nlm.nih.gov/pubmed/31373491 |
| Writing and erasing O-GlcNAc from target proteins in cells. | Ge Y, Woo CM | Biochemical Society transactions | 34783346 | Biochem Soc Trans | 2021 Dec 17 | https://www.ncbi.nlm.nih.gov/pubmed/34783346 |
| O-GlcNAc Engineering on a Target Protein in Cells with Nanobody-OGT and Nanobody-splitOGA. | Ramirez DH, Ge Y, Woo CM | Current protocols | 33950562 | Curr Protoc | 2021 May | https://www.ncbi.nlm.nih.gov/pubmed/33950562 |
| 4-Deoxy-4-fluoro-GalNAz (4FGalNAz) Is a Metabolic Chemical Reporter of O-GlcNAc Modifications, Highlighting the Notable Substrate Flexibility of O-GlcNAc Transferase. | Jackson EG, Cutolo G, Yang B, Yarravarapu N, Burns MWN, Bineva-Todd G, Roustan C, Thoden JB, Lin-Jones HM, van Kuppevelt TH, Holden HM, Schumann B, Kohler JJ, Woo CM, Pratt MR | ACS chemical biology | 34931806 | ACS Chem Biol | 2022 Jan 21 | https://www.ncbi.nlm.nih.gov/pubmed/34931806 |
| GlycoFibroTyper: A Novel Method for the Glycan Analysis of IgG and the Development of a Biomarker Signature of Liver Fibrosis. | Scott DA, Wang M, Grauzam S, Pippin S, Black A, Angel PM, Drake RR, Castellino S, Kono Y, Rockey DC, Mehta AS | Frontiers in immunology | 35197973 | Front Immunol | 2022 | https://www.ncbi.nlm.nih.gov/pubmed/35197973 |
| A Rapid Array-Based Approach to N-Glycan Profiling of Cultured Cells. | Angel PM, Saunders J, Clift CL, White-Gilbertson S, Voelkel-Johnson C, Yeh E, Mehta A, Drake RR | Journal of proteome research | 31535553 | J Proteome Res | 2019 Oct 4 | https://www.ncbi.nlm.nih.gov/pubmed/31535553 |
| Development of an Antibody-Based Platform for the Analysis of Immune Cell-Specific N-linked Glycosylation. | Dressman JW, McDowell CT, Lu X, Angel PM, Drake RR, Mehta AS | Analytical chemistry | 37293957 | Anal Chem | 2023 Jul 11 | https://www.ncbi.nlm.nih.gov/pubmed/37293957 |
| Utilizing multimodal mass spectrometry imaging for profiling immune cell composition and N-glycosylation across colorectal carcinoma disease progression. | Young LEA, Nietert PJ, Stubler R, Kittrell CG, Grimsley G, Lewin DN, Mehta AS, Hajar C, Wang K, O'Quinn EC, Angel PM, Wallace K, Drake RR | Frontiers in pharmacology | 38273829 | Front Pharmacol | 2023 | https://www.ncbi.nlm.nih.gov/pubmed/38273829 |
| On the Cutting Edge of Translational Research. | Angel PM | Clinical chemistry | 33230521 | Clin Chem | 2021 Mar 31 | https://www.ncbi.nlm.nih.gov/pubmed/33230521 |
| Multiplexed imaging mass spectrometry of the extracellular matrix using serial enzyme digests from formalin-fixed paraffin-embedded tissue sections. | Clift CL, Drake RR, Mehta A, Angel PM | Analytical and bioanalytical chemistry | 33206215 | Anal Bioanal Chem | 2021 Apr | https://www.ncbi.nlm.nih.gov/pubmed/33206215 |
| Antibody Panel Based N-Glycan Imaging for N-Glycoprotein Biomarker Discovery. | Black AP, Angel PM, Drake RR, Mehta AS | Current protocols in protein science | 31721442 | Curr Protoc Protein Sci | 2019 Dec | https://www.ncbi.nlm.nih.gov/pubmed/31721442 |
| Spatial N-glycomics of the human aortic valve in development and pediatric endstage congenital aortic valve stenosis. | Angel PM, Drake RR, Park Y, Clift CL, West C, Berkhiser S, Hardiman G, Mehta AS, Bichell DP, Su YR | Journal of molecular and cellular cardiology | 33516683 | J Mol Cell Cardiol | 2021 May | https://www.ncbi.nlm.nih.gov/pubmed/33516683 |
| Imaging Mass Spectrometry and Lectin Analysis of N-Linked Glycans in Carbohydrate Antigen-Defined Pancreatic Cancer Tissues. | McDowell CT, Klamer Z, Hall J, West CA, Wisniewski L, Powers TW, Angel PM, Mehta AS, Lewin DN, Haab BB, Drake RR | Molecular & cellular proteomics : MCP | 33581409 | Mol Cell Proteomics | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/33581409 |
| Applications and continued evolution of glycan imaging mass spectrometry. | McDowell CT, Lu X, Mehta AS, Angel PM, Drake RR | Mass spectrometry reviews | 34392557 | Mass Spectrom Rev | 2023 Mar | https://www.ncbi.nlm.nih.gov/pubmed/34392557 |
| Protease-dependent defects in N-cadherin processing drive PMM2-CDG pathogenesis. | Klaver EJ, Dukes-Rimsky L, Kumar B, Xia ZJ, Dang T, Lehrman MA, Angel P, Drake RR, Freeze HH, Steet R, Flanagan-Steet H | JCI insight | 34784297 | JCI Insight | 2021 Dec 22 | https://www.ncbi.nlm.nih.gov/pubmed/34784297 |
| Set Up for Failure: Pre-Existing Autoantibodies in Lung Transplant. | McQuiston A, Emtiazjoo A, Angel P, Machuca T, Christie J, Atkinson C | Frontiers in immunology | 34456920 | Front Immunol | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/34456920 |
| Rapid N-Glycan Profiling of Serum and Plasma by a Novel Slide-Based Imaging Mass Spectrometry Workflow. | Blaschke CRK, Black AP, Mehta AS, Angel PM, Drake RR | Journal of the American Society for Mass Spectrometry | 32809822 | J Am Soc Mass Spectrom | 2020 Dec 2 | https://www.ncbi.nlm.nih.gov/pubmed/32809822 |
| Array-Based N-Glycan Profiling of Cells in Culture. | Angel PM, Mehta AS, Drake RR | Methods in molecular biology (Clifton, N.J.) | 33908018 | Methods Mol Biol | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/33908018 |
| Collagen fiber regulation in human pediatric aortic valve development and disease. | Clift CL, Su YR, Bichell D, Jensen Smith HC, Bethard JR, Norris-Caneda K, Comte-Walters S, Ball LE, Hollingsworth MA, Mehta AS, Drake RR, Angel PM | Scientific reports | 33963260 | Sci Rep | 2021 May 7 | https://www.ncbi.nlm.nih.gov/pubmed/33963260 |
| The role of neuraminidase in TLR4-MAPK signalling and the release of cytokines by lupus serum-stimulated mesangial cells. | Sundararaj K, Rodgers J, Angel P, Wolf B, Nowling TK | Immunology | 33314123 | Immunology | 2021 Apr | https://www.ncbi.nlm.nih.gov/pubmed/33314123 |
| Optimization of Multiple Glycosidase and Chemical Stabilization Strategies for N-Glycan Isomer Detection by Mass Spectrometry Imaging in Formalin-Fixed, Paraffin-Embedded Tissues. | West CA, Lu X, Grimsley G, Norris-Caneda K, Mehta AS, Angel PM, Drake RR | Methods in molecular biology (Clifton, N.J.) | 33908016 | Methods Mol Biol | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/33908016 |
| Bioorthogonal Chemical Labeling Probes Targeting Sialic Acid Isomers for N-Glycan MALDI Imaging Mass Spectrometry of Tissues, Cells, and Biofluids. | Lu X, McDowell CT, Blaschke CRK, Liu L, Grimsley G, Wisniewski L, Gao C, Mehta AS, Haab BB, Angel PM, Drake RR | Analytical chemistry | 37126482 | Anal Chem | 2023 May 16 | https://www.ncbi.nlm.nih.gov/pubmed/37126482 |
| An N-glycome tissue atlas of 15 human normal and cancer tissue types determined by MALDI-imaging mass spectrometry. | Wallace EN, West CA, McDowell CT, Lu X, Bruner E, Mehta AS, Aoki-Kinoshita KF, Angel PM, Drake RR | Scientific reports | 38177192 | Sci Rep | 2024 Jan 4 | https://www.ncbi.nlm.nih.gov/pubmed/38177192 |
| Pro-inflammatory IgG1 N-glycan signature correlates with primary graft dysfunction onset in COPD patients. | McQuiston A, Scott D, Nord D, Langerude L, Pelaez A, Machuca T, Mehta A, Drake RR, Christie JD, Angel P, Atkinson C | Transplant immunology | 34767945 | Transpl Immunol | 2022 Apr | https://www.ncbi.nlm.nih.gov/pubmed/34767945 |
| Multi-omic landscape of human gliomas from diagnosis to treatment and recurrence. | Piyadasa H, Oberlton B, Ribi M, Ranek JS, Averbukh I, Leow K, Amouzgar M, Liu CC, Greenwald NF, McCaffrey EF, Kumar R, Ferrian S, Tsai AG, Filiz F, Fullaway CC, Bosse M, Varra SR, Kong A, Sowers C, Gephart MH, Nuñez-Perez P, Yang E, Travers M, Schachter MJ, Liang S, Santi MR, Bucktrout S, Gherardini PF, Cole K, Barish ME, Brown CE, Oldridge DA, Drake RR, Phillips JJ, Okada H, Prins R, Bendall SC, Angelo M | bioRxiv : the preprint server for biology | 40161803 | bioRxiv | 2025 Mar 14 | https://www.ncbi.nlm.nih.gov/pubmed/40161803 |
| Integrating age, BMI, and serum N-glycans detected by MALDI mass spectrometry to classify suspicious mammogram findings as benign lesions or breast cancer. | Blaschke CRK, Hill EG, Mehta AS, Angel PM, Laronga C, Drake RR | Scientific reports | 36460712 | Sci Rep | 2022 Dec 2 | https://www.ncbi.nlm.nih.gov/pubmed/36460712 |
| Evaluation of Therapeutic Collagen-Based Biomaterials in the Infarcted Mouse Heart by Extracellular Matrix Targeted MALDI Imaging Mass Spectrometry. | Clift CL, McLaughlin S, Muñoz M, Suuronen EJ, Rotstein BH, Mehta AS, Drake RR, Alarcon EI, Angel PM | Journal of the American Society for Mass Spectrometry | 34713699 | J Am Soc Mass Spectrom | 2021 Dec 1 | https://www.ncbi.nlm.nih.gov/pubmed/34713699 |
| Glycan Imaging Mass Spectrometry: Progress in Developing Clinical Diagnostic Assays for Tissues, Biofluids, and Cells. | Blaschke CRK, McDowell CT, Black AP, Mehta AS, Angel PM, Drake RR | Clinics in laboratory medicine | 34020762 | Clin Lab Med | 2021 Jun | https://www.ncbi.nlm.nih.gov/pubmed/34020762 |
| Metabolic Markers and Association of Biological Sex in Lupus Nephritis. | Wolf B, Blaschke CRK, Mungaray S, Weselman BT, Stefanenko M, Fedoriuk M, Bai H, Rodgers J, Palygin O, Drake RR, Nowling TK | International journal of molecular sciences | 38003679 | Int J Mol Sci | 2023 Nov 18 | https://www.ncbi.nlm.nih.gov/pubmed/38003679 |
| Determining the N-Glycan and Collagen/Extracellular Matrix Protein Compositions in a Novel Outcome Cohort of Prostate Cancer Tissue Microarrays Using MALDI-MSI. | Hartig JP, Bejar K, Young LEA, Grimsley G, Bethard JR, Troyer DA, Hernandez J, Wu JD, Ippolito JE, Ball LE, Gelfond JAL, Johnson-Pais TL, Mehta AS, Leach RJ, Angel PM, Drake RR | Cancer research communications | 39347566 | Cancer Res Commun | 2024 Nov 1 | https://www.ncbi.nlm.nih.gov/pubmed/39347566 |
| Roles of glycoconjugates in neural patterning in C. elegans. | Bülow HE | Current topics in developmental biology | 33992159 | Curr Top Dev Biol | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/33992159 |
| Imaging Glycosaminoglycan Modification Patterns In Vivo. | Bülow HE | Methods in molecular biology (Clifton, N.J.) | 34626406 | Methods Mol Biol | 2022 | https://www.ncbi.nlm.nih.gov/pubmed/34626406 |
| Heparan sulfates and heparan sulfate proteoglycans in hematopoiesis. | Piszczatowski RT, Bülow HE, Steidl U | Blood | 38639475 | Blood | 2024 Jun 20 | https://www.ncbi.nlm.nih.gov/pubmed/38639475 |
| Aurora Kinase A Inhibition: A Mega-Hit for Myelofibrosis Therapy? | Piszczatowski RT, Steidl U | Clinical cancer research : an official journal of the American Association for Cancer Research | 31196854 | Clin Cancer Res | 2019 Aug 15 | https://www.ncbi.nlm.nih.gov/pubmed/31196854 |
| The HSPG syndecan is a core organizer of cholinergic synapses. | Zhou X, Vachon C, Cizeron M, Romatif O, Bülow HE, Jospin M, Bessereau JL | The Journal of cell biology | 34213535 | J Cell Biol | 2021 Sep 6 | https://www.ncbi.nlm.nih.gov/pubmed/34213535 |
| A glycan-based approach to cell characterization and isolation: Hematopoiesis as a paradigm. | Piszczatowski RT, Schwenger E, Sundaravel S, Stein CM, Liu Y, Stanley P, Verma A, Zheng D, Seidel RD, Almo SC, Townley RA, Bülow HE, Steidl U | The Journal of experimental medicine | 36066492 | J Exp Med | 2022 Nov 7 | https://www.ncbi.nlm.nih.gov/pubmed/36066492 |
| HSMotifDiscover: identification of motifs in sequences composed of non-single-letter elements. | Singh VK, Misra R, Almo SC, Steidl UG, Bülow HE, Zheng D | Bioinformatics (Oxford, England) | 35771633 | Bioinformatics | 2022 Aug 10 | https://www.ncbi.nlm.nih.gov/pubmed/35771633 |
| Ganglioside Extraction, Purification and Profiling. | Porter MJ, Zhang GL, Schnaar RL | Journal of visualized experiments : JoVE | 33779615 | J Vis Exp | 2021 Mar 12 | https://www.ncbi.nlm.nih.gov/pubmed/33779615 |
| Siglec Ligands. | Gonzalez-Gil A, Schnaar RL | Cells | 34065256 | Cells | 2021 May 20 | https://www.ncbi.nlm.nih.gov/pubmed/34065256 |
| Plasma Membrane Calcium ATPase-Neuroplastin Complexes Are Selectively Stabilized in GM1-Containing Lipid Rafts. | Ilic K, Lin X, Malci A, Stojanović M, Puljko B, Rožman M, Vukelić Ž, Heffer M, Montag D, Schnaar RL, Kalanj-Bognar S, Herrera-Molina R, Mlinac-Jerkovic K | International journal of molecular sciences | 34948386 | Int J Mol Sci | 2021 Dec 18 | https://www.ncbi.nlm.nih.gov/pubmed/34948386 |
| Gangliosides as Siglec ligands. | Schnaar RL | Glycoconjugate journal | 36701102 | Glycoconj J | 2023 Apr | https://www.ncbi.nlm.nih.gov/pubmed/36701102 |
| Who's in, who's out? Re-evaluation of lipid raft residents. | Mlinac-Jerkovic K, Ilic K, Zjalić M, Mandić D, Debeljak Ž, Balog M, Damjanović V, Maček Hrvat N, Habek N, Kalanj-Bognar S, Schnaar RL, Heffer M | Journal of neurochemistry | 34081780 | J Neurochem | 2021 Aug | https://www.ncbi.nlm.nih.gov/pubmed/34081780 |
| The Human Ganglioside Interactome in Live Cells Revealed Using Clickable Photoaffinity Ganglioside Probes. | Zhang GL, Porter MJ, Awol AK, Orsburn BC, Canner SW, Gray JJ, O'Meally RN, Cole RN, Schnaar RL | Journal of the American Chemical Society | 38887845 | J Am Chem Soc | 2024 Jul 3 | https://www.ncbi.nlm.nih.gov/pubmed/38887845 |
| Tumor necrosis factor α receptor 1A transduces the inhibitory effect on axon regeneration triggered by IgG anti-ganglioside GD1a antibodies. | Báez BB, Bacaglio CR, Prendergast JM, Rozés-Salvador V, Sheikh KA, Bianchet M, Farah MH, Schnaar RL, Bisbal M, Lopez PHH | Biochimica et biophysica acta. Molecular basis of disease | 38897255 | Biochim Biophys Acta Mol Basis Dis | 2024 Oct | https://www.ncbi.nlm.nih.gov/pubmed/38897255 |
| Designing Smaller, Synthetic, Functional Mimetics of Sulfated Glycosaminoglycans as Allosteric Modulators of Coagulation Factors. | Abdelfadiel EI, Gunta R, Villuri BK, Afosah DK, Sankaranarayanan NV, Desai UR | Journal of medicinal chemistry | 37001055 | J Med Chem | 2023 Apr 13 | https://www.ncbi.nlm.nih.gov/pubmed/37001055 |
| Combinatorial Virtual Library Screening Study of Transforming Growth Factor-β2-Chondroitin Sulfate System. | Sankaranarayanan NV, Nagarajan B, Desai UR | International journal of molecular sciences | 34299163 | Int J Mol Sci | 2021 Jul 14 | https://www.ncbi.nlm.nih.gov/pubmed/34299163 |
| Molecular dynamics simulations to understand glycosaminoglycan interactions in the free- and protein-bound states. | Nagarajan B, Holmes SG, Sankaranarayanan NV, Desai UR | Current opinion in structural biology | 35306321 | Curr Opin Struct Biol | 2022 Jun | https://www.ncbi.nlm.nih.gov/pubmed/35306321 |
| Assessing Genetic Algorithm-Based Docking Protocols for Prediction of Heparin Oligosaccharide Binding Geometries onto Proteins. | Holmes SG, Desai UR | Biomolecules | 38002315 | Biomolecules | 2023 Nov 9 | https://www.ncbi.nlm.nih.gov/pubmed/38002315 |
| Alteration of Neuropilin-1 and Heparan Sulfate Interaction Impairs Murine B16 Tumor Growth. | Painter CD, Sankaranarayanan NV, Nagarajan B, Mandel Clausen T, West AMV, Setiawan NJ, Park J, Porell RN, Bartels PL, Sandoval DR, Vasquez GJ, Chute JP, Godula K, Vander Kooi CW, Gordts PLSM, Corbett KD, Termini CM, Desai UR, Esko JD | ACS chemical biology | 39099090 | ACS Chem Biol | 2024 Aug 16 | https://www.ncbi.nlm.nih.gov/pubmed/39099090 |
| Discovering small-molecule therapeutics against SARS-CoV-2. | Tiwari V, Beer JC, Sankaranarayanan NV, Swanson-Mungerson M, Desai UR | Drug discovery today | 32574699 | Drug Discov Today | 2020 Aug | https://www.ncbi.nlm.nih.gov/pubmed/32574699 |
| Preferential recognition and antagonism of SARS-CoV-2 spike glycoprotein binding to 3-O-sulfated heparan sulfate. | Tiwari V, Tandon R, Sankaranarayanan NV, Beer JC, Kohlmeir EK, Swanson-Mungerson M, Desai UR | bioRxiv : the preprint server for biology | 33052337 | bioRxiv | 2020 Oct 8 | https://www.ncbi.nlm.nih.gov/pubmed/33052337 |
| Structural Insights Into How Proteoglycans Determine Chemokine-CXCR1/CXCR2 Interactions: Progress and Challenges. | Rajarathnam K, Desai UR | Frontiers in immunology | 32391006 | Front Immunol | 2020 | https://www.ncbi.nlm.nih.gov/pubmed/32391006 |
| Merging cultures and disciplines to create a drug discovery ecosystem at Virginia commonwealth university: Medicinal chemistry, structural biology, molecular and behavioral pharmacology and computational chemistry. | Kellogg GE, Cen Y, Dukat M, Ellis KC, Guo Y, Li J, May AE, Safo MK, Zhang S, Zhang Y, Desai UR | SLAS discovery : advancing life sciences R & D | 36863508 | SLAS Discov | 2023 Sep | https://www.ncbi.nlm.nih.gov/pubmed/36863508 |
| Computational studies on glycosaminoglycan recognition of sialyl transferases. | Sankaranarayanan NV, Sistla S, Nagarajan B, Chittum JE, Lau JTY, Desai UR | Glycobiology | 37171590 | Glycobiology | 2023 Aug 14 | https://www.ncbi.nlm.nih.gov/pubmed/37171590 |
| In-Depth Molecular Dynamics Study of All Possible Chondroitin Sulfate Disaccharides Reveals Key Insight into Structural Heterogeneity and Dynamism. | Nagarajan B, Sankaranarayanan NV, Desai UR | Biomolecules | 35053225 | Biomolecules | 2022 Jan 5 | https://www.ncbi.nlm.nih.gov/pubmed/35053225 |
| A Robust Proteomics-Based Method for Identifying Preferred Protein Targets of Synthetic Glycosaminoglycan Mimetics. | Afosah DK, Ongolu R, Fayyad RM, Hawkridge A, Desai UR | bioRxiv : the preprint server for biology | 39896571 | bioRxiv | 2025 Jan 24 | https://www.ncbi.nlm.nih.gov/pubmed/39896571 |
| The alphaherpesvirus conserved pUS10 is important for natural infection and its expression is regulated by the conserved Herpesviridae protein kinase (CHPK). | Ponnuraj N, Akbar H, Arrington JV, Spatz SJ, Nagarajan B, Desai UR, Jarosinski KW | PLoS pathogens | 36749787 | PLoS Pathog | 2023 Feb | https://www.ncbi.nlm.nih.gov/pubmed/36749787 |
| On the Selectivity of Heparan Sulfate Recognition by SARS-CoV-2 Spike Glycoprotein. | Chittum JE, Sankaranarayanan NV, O'Hara CP, Desai UR | ACS medicinal chemistry letters | 34786180 | ACS Med Chem Lett | 2021 Nov 11 | https://www.ncbi.nlm.nih.gov/pubmed/34786180 |
| Discovery of Sulfated Small Molecule Inhibitors of Matrix Metalloproteinase-8. | Morla S, Desai UR | Biomolecules | 32784891 | Biomolecules | 2020 Aug 9 | https://www.ncbi.nlm.nih.gov/pubmed/32784891 |
| Design and Synthesis of Small Molecule Probes of MDA-9/Syntenin. | Sankaranarayanan NV, Villuri BK, Nagarajan B, Lewicki S, Das SK, Fisher PB, Desai UR | Biomolecules | 39456220 | Biomolecules | 2024 Oct 12 | https://www.ncbi.nlm.nih.gov/pubmed/39456220 |
| Novel Isobaric Tagging Reagent Enabled Multiplex Quantitative Glycoproteomics via Electron-Transfer/Higher-Energy Collisional Dissociation (EThcD) Mass Spectrometry. | Li M, Zhong X, Feng Y, Li L | Journal of the American Society for Mass Spectrometry | 36095095 | J Am Soc Mass Spectrom | 2022 Oct 5 | https://www.ncbi.nlm.nih.gov/pubmed/36095095 |
| Quantitative Analysis and Structural Elucidation of Fatty Acids by Isobaric Multiplex Labeling Reagents for Carbonyl-Containing Compound (SUGAR) Tags and m-CPBA Epoxidation. | Feng Y, Lv Y, Gu TJ, Chen B, Li L | Analytical chemistry | 36099193 | Anal Chem | 2022 Sep 27 | https://www.ncbi.nlm.nih.gov/pubmed/36099193 |
| On-tissue amidation of sialic acid with aniline for sensitive imaging of sialylated N-glycans from FFPE tissue sections via MALDI mass spectrometry. | Zhang H, Shi X, Liu Y, Wang B, Xu M, Welham NV, Li L | Analytical and bioanalytical chemistry | 35072748 | Anal Bioanal Chem | 2022 Jul | https://www.ncbi.nlm.nih.gov/pubmed/35072748 |
| Signature-Ion-Triggered Mass Spectrometry Approach Enabled Discovery of N- and O-Linked Glycosylated Neuropeptides in the Crustacean Nervous System. | Cao Q, Yu Q, Liu Y, Chen Z, Li L | Journal of proteome research | 31875397 | J Proteome Res | 2020 Feb 7 | https://www.ncbi.nlm.nih.gov/pubmed/31875397 |
| Discovery of Missing Methylation Sites on Endogenous Peptides of Human Cell Lines. | Yan X, Li L, Jia C | Journal of the American Society for Mass Spectrometry | 31429054 | J Am Soc Mass Spectrom | 2019 Dec | https://www.ncbi.nlm.nih.gov/pubmed/31429054 |
| Recent advances in mass spectrometry (MS)-based glycoproteomics in complex biological samples. | Chen Z, Huang J, Li L | Trends in analytical chemistry : TRAC | 31579312 | Trends Analyt Chem | 2019 Sep | https://www.ncbi.nlm.nih.gov/pubmed/31579312 |
| Isolation and characterization of glycosylated neuropeptides. | Liu Y, Cao Q, Li L | Methods in enzymology | 31606074 | Methods Enzymol | 2019 | https://www.ncbi.nlm.nih.gov/pubmed/31606074 |
| Nanosecond photochemically promoted click chemistry for enhanced neuropeptide visualization and rapid protein labeling. | Li G, Ma F, Cao Q, Zheng Z, DeLaney K, Liu R, Li L | Nature communications | 31619683 | Nat Commun | 2019 Oct 16 | https://www.ncbi.nlm.nih.gov/pubmed/31619683 |
| Dual-Functional Ti(IV)-IMAC Material Enables Simultaneous Enrichment and Separation of Diverse Glycopeptides and Phosphopeptides. | Huang J, Liu X, Wang D, Cui Y, Shi X, Dong J, Ye M, Li L | Analytical chemistry | 34100586 | Anal Chem | 2021 Jun 22 | https://www.ncbi.nlm.nih.gov/pubmed/34100586 |
| Recent Advances in Mass Spectrometry-Based Glycomic and Glycoproteomic Studies of Pancreatic Diseases. | Tabang DN, Ford M, Li L | Frontiers in chemistry | 34368082 | Front Chem | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/34368082 |
| In-Depth Site-Specific O-Glycosylation Analysis of Glycoproteins and Endogenous Peptides in Cerebrospinal Fluid (CSF) from Healthy Individuals, Mild Cognitive Impairment (MCI), and Alzheimer's Disease (AD) Patients. | Chen Z, Wang D, Yu Q, Johnson J, Shipman R, Zhong X, Huang J, Yu Q, Zetterberg H, Asthana S, Carlsson C, Okonkwo O, Li L | ACS chemical biology | 34964596 | ACS Chem Biol | 2022 Nov 18 | https://www.ncbi.nlm.nih.gov/pubmed/34964596 |
| Cotton Ti-IMAC: Developing Phosphorylated Cotton as a Novel Platform for Phosphopeptide Enrichment. | Wang D, Huang J, Zhang H, Gu TJ, Li L | ACS applied materials & interfaces | 37812448 | ACS Appl Mater Interfaces | 2023 Oct 18 | https://www.ncbi.nlm.nih.gov/pubmed/37812448 |
| Site-specific chirality-conferred structural compaction differentially mediates the cytotoxicity of Aβ42. | Li G, Jeon CK, Ma M, Jia Y, Zheng Z, Delafield DG, Lu G, Romanova EV, Sweedler JV, Ruotolo BT, Li L | Chemical science | 37293657 | Chem Sci | 2023 Jun 7 | https://www.ncbi.nlm.nih.gov/pubmed/37293657 |
| Recent Advances in Analytical Approaches for Glycan and Glycopeptide Quantitation. | Delafield DG, Li L | Molecular & cellular proteomics : MCP | 32576592 | Mol Cell Proteomics | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/32576592 |
| Chemoenzymatic Synthesis of Glycopeptides Bearing Galactose-Xylose Disaccharide from the Proteoglycan Linkage Region. | Gao J, Lin PH, Nick ST, Huang J, Tykesson E, Ellervik U, Li L, Huang X | Organic letters | 33576634 | Org Lett | 2021 Mar 5 | https://www.ncbi.nlm.nih.gov/pubmed/33576634 |
| Structural basis of Blastomyces Endoglucanase-2 adjuvancy in anti-fungal and -viral immunity. | Dos Santos Dias L, Dobson HE, Bakke BK, Kujoth GC, Huang J, Kohn EM, Taira CL, Wang H, Supekar NT, Fites JS, Gates D, Gomez CL, Specht CA, Levitz SM, Azadi P, Li L, Suresh M, Klein BS, Wüthrich M | PLoS pathogens | 33735218 | PLoS Pathog | 2021 Mar | https://www.ncbi.nlm.nih.gov/pubmed/33735218 |
| High-resolution magnetic resonance and mass spectrometry imaging of the human larynx. | Kishimoto AO, Kishimoto Y, Shi X, Hutchinson EB, Zhang H, Shi Y, Oliveira G, Li L, Welham NV, Rowland IJ | Journal of anatomy | 34032275 | J Anat | 2021 Sep | https://www.ncbi.nlm.nih.gov/pubmed/34032275 |
| Developing mass spectrometry for the quantitative analysis of neuropeptides. | Sauer CS, Phetsanthad A, Riusech OL, Li L | Expert review of proteomics | 34375152 | Expert Rev Proteomics | 2021 Jul | https://www.ncbi.nlm.nih.gov/pubmed/34375152 |
| In-depth Site-specific Analysis of N-glycoproteome in Human Cerebrospinal Fluid and Glycosylation Landscape Changes in Alzheimer's Disease. | Chen Z, Yu Q, Yu Q, Johnson J, Shipman R, Zhong X, Huang J, Asthana S, Carlsson C, Okonkwo O, Li L | Molecular & cellular proteomics : MCP | 33862227 | Mol Cell Proteomics | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/33862227 |
| The transcriptional elongation factor CTR9 demarcates PRC2-mediated H3K27me3 domains by altering PRC2 subtype equilibrium. | Chan NT, Huang J, Ma G, Zeng H, Donahue K, Wang Y, Li L, Xu W | Nucleic acids research | 35137163 | Nucleic Acids Res | 2022 Feb 28 | https://www.ncbi.nlm.nih.gov/pubmed/35137163 |
| Quantification and molecular imaging of fatty acid isomers from complex biological samples by mass spectrometry. | Zhang H, Xu M, Shi X, Liu Y, Li Z, Jagodinsky JC, Ma M, Welham NV, Morris ZS, Li L | Chemical science | 34194701 | Chem Sci | 2021 May 4 | https://www.ncbi.nlm.nih.gov/pubmed/34194701 |
| Enabling Global Analysis of Protein Citrullination via Biotin Thiol Tag-Assisted Mass Spectrometry. | Shi Y, Li Z, Wang B, Shi X, Ye H, Delafield DG, Lv L, Ye Z, Chen Z, Ma F, Li L | Analytical chemistry | 36512406 | Anal Chem | 2022 Dec 27 | https://www.ncbi.nlm.nih.gov/pubmed/36512406 |
| Finding the Sweet Spot in ERLIC Mobile Phase for Simultaneous Enrichment of N-Glyco and Phosphopeptides. | Cui Y, Yang K, Tabang DN, Huang J, Tang W, Li L | Journal of the American Society for Mass Spectrometry | 31286442 | J Am Soc Mass Spectrom | 2019 Dec | https://www.ncbi.nlm.nih.gov/pubmed/31286442 |
| Dual-Functional Titanium(IV) Immobilized Metal Affinity Chromatography Approach for Enabling Large-Scale Profiling of Protein Mannose-6-Phosphate Glycosylation and Revealing Its Predominant Substrates. | Huang J, Dong J, Shi X, Chen Z, Cui Y, Liu X, Ye M, Li L | Analytical chemistry | 31398006 | Anal Chem | 2019 Sep 17 | https://www.ncbi.nlm.nih.gov/pubmed/31398006 |
| Mass Spectrometry Imaging of N-Glycans from Formalin-Fixed Paraffin-Embedded Tissue Sections Using a Novel Subatmospheric Pressure Ionization Source. | Shi Y, Li Z, Felder MA, Yu Q, Shi X, Peng Y, Cao Q, Wang B, Puglielli L, Patankar MS, Li L | Analytical chemistry | 31507162 | Anal Chem | 2019 Oct 15 | https://www.ncbi.nlm.nih.gov/pubmed/31507162 |
| Analysis of pancreatic extracellular matrix protein post-translational modifications via electrostatic repulsion-hydrophilic interaction chromatography coupled with mass spectrometry. | Tabang DN, Cui Y, Tremmel DM, Ford M, Li Z, Sackett SD, Odorico JS, Li L | Molecular omics | 34318855 | Mol Omics | 2021 Oct 11 | https://www.ncbi.nlm.nih.gov/pubmed/34318855 |
| Evaluation of Collagen Alterations in Early Precursor Lesions of High Grade Serous Ovarian Cancer by Second Harmonic Generation Microscopy and Mass Spectrometry. | Gant KL, Jambor AN, Li Z, Rentchler EC, Weisman P, Li L, Patankar MS, Campagnola PJ | Cancers | 34199725 | Cancers (Basel) | 2021 Jun 4 | https://www.ncbi.nlm.nih.gov/pubmed/34199725 |
| Counterion Optimization Dramatically Improves Selectivity for Phosphopeptides and Glycopeptides in Electrostatic Repulsion-Hydrophilic Interaction Chromatography. | Cui Y, Tabang DN, Zhang Z, Ma M, Alpert AJ, Li L | Analytical chemistry | 34042420 | Anal Chem | 2021 Jun 8 | https://www.ncbi.nlm.nih.gov/pubmed/34042420 |
| DiLeuPMP: A Multiplexed Isobaric Labeling Method for Quantitative Analysis of O-Glycans. | Li M, Gu TJ, Lin X, Li L | Analytical chemistry | 34240851 | Anal Chem | 2021 Jul 20 | https://www.ncbi.nlm.nih.gov/pubmed/34240851 |
| Simultaneous enrichment and separation of neutral and sialyl glycopeptides of SARS-CoV-2 spike protein enabled by dual-functionalized Ti-IMAC material. | Huang J, Wang D, Shipman RD, Zhu Z, Liu Y, Li L | Analytical and bioanalytical chemistry | 34155551 | Anal Bioanal Chem | 2021 Dec | https://www.ncbi.nlm.nih.gov/pubmed/34155551 |
| Selective Enrichment of Sialylglycopeptides Enabled by Click Chemistry and Dynamic Covalent Exchange. | Li M, Huang J, Ma M, Shi X, Li L | Analytical chemistry | 35467842 | Anal Chem | 2022 May 10 | https://www.ncbi.nlm.nih.gov/pubmed/35467842 |
| Native Ion Mobility-Mass Spectrometry-Enabled Fast Structural Interrogation of Labile Protein Surface Modifications at the Intact Protein Level. | Li G, Phetsanthad A, Ma M, Yu Q, Nair A, Zheng Z, Ma F, DeLaney K, Hong S, Li L | Analytical chemistry | 35050568 | Anal Chem | 2022 Feb 1 | https://www.ncbi.nlm.nih.gov/pubmed/35050568 |
| Multiplex Quantitative Glycomics Enabled by Periodate Oxidation and Triplex Mass Defect Isobaric Multiplex Reagents for Carbonyl-Containing Compound Tags. | Feng Y, Li M, Lin Y, Chen B, Li L | Analytical chemistry | 31407884 | Anal Chem | 2019 Sep 17 | https://www.ncbi.nlm.nih.gov/pubmed/31407884 |
| Identification of Double Bond Position Isomers in Unsaturated Lipids by m-CPBA Epoxidation and Mass Spectrometry Fragmentation. | Feng Y, Chen B, Yu Q, Li L | Analytical chemistry | 30608661 | Anal Chem | 2019 Feb 5 | https://www.ncbi.nlm.nih.gov/pubmed/30608661 |
| Recent advances in ion mobility-mass spectrometry for improved structural characterization of glycans and glycoconjugates. | Chen Z, Glover MS, Li L | Current opinion in chemical biology | 29080446 | Curr Opin Chem Biol | 2018 Feb | https://www.ncbi.nlm.nih.gov/pubmed/29080446 |
| Glycopeptide Biomarkers in Serum Haptoglobin for Hepatocellular Carcinoma Detection in Patients with Nonalcoholic Steatohepatitis. | Zhu J, Huang J, Zhang J, Chen Z, Lin Y, Grigorean G, Li L, Liu S, Singal AG, Parikh ND, Lubman DM | Journal of proteome research | 32412768 | J Proteome Res | 2020 Aug 7 | https://www.ncbi.nlm.nih.gov/pubmed/32412768 |
| High-Throughput Quantitative Glycomics Enabled by 12-plex Isobaric Multiplex Labeling Reagents for Carbonyl-Containing Compound (SUGAR) Tags. | Li M, Feng Y, Ma M, Kapur A, Patankar M, Li L | Journal of proteome research | 36700627 | J Proteome Res | 2023 May 5 | https://www.ncbi.nlm.nih.gov/pubmed/36700627 |
| Increased expression of SLC25A1/CIC causes an autistic-like phenotype with altered neuron morphology. | Rigby MJ, Orefice NS, Lawton AJ, Ma M, Shapiro SL, Yi SY, Dieterich IA, Frelka A, Miles HN, Pearce RA, Yu JPJ, Li L, Denu JM, Puglielli L | Brain : a journal of neurology | 35203088 | Brain | 2022 Apr 18 | https://www.ncbi.nlm.nih.gov/pubmed/35203088 |
| Boost-DiLeu: Enhanced Isobaric N,N-Dimethyl Leucine Tagging Strategy for a Comprehensive Quantitative Glycoproteomic Analysis. | Wang D, Ma M, Huang J, Gu TJ, Cui Y, Li M, Wang Z, Zetterberg H, Li L | Analytical chemistry | 35960654 | Anal Chem | 2022 Aug 30 | https://www.ncbi.nlm.nih.gov/pubmed/35960654 |
| Recent Developments and Applications of Quantitative Proteomics Strategies for High-Throughput Biomolecular Analyses in Cancer Research. | Miles HN, Delafield DG, Li L | RSC chemical biology | 34430874 | RSC Chem Biol | 2021 Aug | https://www.ncbi.nlm.nih.gov/pubmed/34430874 |
| On-Tissue Derivatization with Girard's Reagent P Enhances N-Glycan Signals for Formalin-Fixed Paraffin-Embedded Tissue Sections in MALDI Mass Spectrometry Imaging. | Zhang H, Shi X, Vu NQ, Li G, Li Z, Shi Y, Li M, Wang B, Welham NV, Patankar MS, Weisman P, Li L | Analytical chemistry | 32865977 | Anal Chem | 2020 Oct 6 | https://www.ncbi.nlm.nih.gov/pubmed/32865977 |
| Isobaric Multiplex Labeling Reagents for Carbonyl-Containing Compound (SUGAR) Tags: A Probe for Quantitative Glycomic Analysis. | Feng Y, Chen B, Yu Q, Zhong X, Frost DC, Ikonomidou C, Li L | Analytical chemistry | 30649853 | Anal Chem | 2019 Feb 19 | https://www.ncbi.nlm.nih.gov/pubmed/30649853 |
| 6-Plex mdSUGAR Isobaric-Labeling Guide Fingerprint Embedding for Glycomics Analysis. | Ma M, Li M, Zhu Y, Zhao Y, Wu F, Wang Z, Feng Y, Chiang HY, Patankar MS, Chang C, Li L | Analytical chemistry | 37982459 | Anal Chem | 2023 Dec 5 | https://www.ncbi.nlm.nih.gov/pubmed/37982459 |
| Complementary proteome and glycoproteome access revealed through comparative analysis of reversed phase and porous graphitic carbon chromatography. | Delafield DG, Miles HN, Liu Y, Ricke WA, Li L | Analytical and bioanalytical chemistry | 35137243 | Anal Bioanal Chem | 2022 Jul | https://www.ncbi.nlm.nih.gov/pubmed/35137243 |
| Virtual screening for small-molecule pathway regulators by image-profile matching. | Rohban MH, Fuller AM, Tan C, Goldstein JT, Syangtan D, Gutnick A, DeVine A, Nijsure MP, Rigby M, Sacher JR, Corsello SM, Peppler GB, Bogaczynska M, Boghossian A, Ciotti GE, Hands AT, Mekareeya A, Doan M, Gale JP, Derynck R, Turbyville T, Boerckel JD, Singh S, Kiessling LL, Schwarz TL, Varelas X, Wagner FF, Kafri R, Eisinger-Mathason TSK, Carpenter AE | Cell systems | 36057257 | Cell Syst | 2022 Sep 21 | https://www.ncbi.nlm.nih.gov/pubmed/36057257 |
| Engineered Glycan-Binding Proteins for Recognition of the Thomsen-Friedenreich Antigen and Structurally Related Disaccharides. | Ward EM, Zamora CY, Schocker NS, Ghosh S, Kizer ME, Imperiali B | ACS chemical biology | 36525666 | ACS Chem Biol | 2023 Jan 20 | https://www.ncbi.nlm.nih.gov/pubmed/36525666 |
| CH-π Interactions in Glycan Recognition. | Kiessling LL, Diehl RC | ACS chemical biology | 34615357 | ACS Chem Biol | 2021 Oct 15 | https://www.ncbi.nlm.nih.gov/pubmed/34615357 |
| Human oral lectin ZG16B acts as a cell wall polysaccharide probe to decode host-microbe interactions with oral commensals. | Ghosh S, Ahearn CP, Isabella CR, Marando VM, Dodge GJ, Bartlett H, McPherson RL, Dugan AE, Jain S, Neznanova L, Tettelin H, Putnik R, Grimes CL, Ruhl S, Kiessling LL, Imperiali B | Proceedings of the National Academy of Sciences of the United States of America | 37216558 | Proc Natl Acad Sci U S A | 2023 May 30 | https://www.ncbi.nlm.nih.gov/pubmed/37216558 |
| Stereoelectronic Effects Impact Glycan Recognition. | McMahon CM, Isabella CR, Windsor IW, Kosma P, Raines RT, Kiessling LL | Journal of the American Chemical Society | 31930911 | J Am Chem Soc | 2020 Feb 5 | https://www.ncbi.nlm.nih.gov/pubmed/31930911 |
| Soluble Human Lectins at the Host-Microbe Interface. | Peiffer AL, Dugan AE, Kiessling LL | Annual review of biochemistry | 38640018 | Annu Rev Biochem | 2024 Aug | https://www.ncbi.nlm.nih.gov/pubmed/38640018 |
| Strategies and Tactics for the Development of Selective Glycan-Binding Proteins. | Ward EM, Kizer ME, Imperiali B | ACS chemical biology | 33497192 | ACS Chem Biol | 2021 Oct 15 | https://www.ncbi.nlm.nih.gov/pubmed/33497192 |
| Lectin-Seq: A method to profile lectin-microbe interactions in native communities. | McPherson RL, Isabella CR, Walker RL, Sergio D, Bae S, Gaca T, Raman S, Nguyen LTT, Wesener DA, Halim M, Wuo MG, Dugan A, Kerby R, Ghosh S, Rey FE, Dhennezel C, Pishchany G, Lensch V, Vlamakis H, Alm EJ, Xavier RJ, Kiessling LL | Science advances | 37506208 | Sci Adv | 2023 Jul 28 | https://www.ncbi.nlm.nih.gov/pubmed/37506208 |
| Lectin Fingerprinting Distinguishes Antibody Neutralization in SARS-CoV-2. | Wuo MG, Dugan AE, Halim M, Hauser BM, Feldman J, Caradonna TM, Zhang S, Pepi LE, Atyeo C, Fischinger S, Alter G, Garcia-Beltran WF, Azadi P, Hung D, Schmidt AG, Kiessling LL | ACS central science | 37252360 | ACS Cent Sci | 2023 May 24 | https://www.ncbi.nlm.nih.gov/pubmed/37252360 |
| Human intelectin-1 (ITLN1) genetic variation and intestinal expression. | Nonnecke EB, Castillo PA, Dugan AE, Almalki F, Underwood MA, De La Motte CA, Yuan W, Lu W, Shen B, Johansson MEV, Kiessling LL, Hollox EJ, Lönnerdal B, Bevins CL | Scientific reports | 34145348 | Sci Rep | 2021 Jun 18 | https://www.ncbi.nlm.nih.gov/pubmed/34145348 |
| Advances in glycoscience to understand viral infection and colonization. | Dugan AE, Peiffer AL, Kiessling LL | Nature methods | 35396476 | Nat Methods | 2022 Apr | https://www.ncbi.nlm.nih.gov/pubmed/35396476 |
| Glycan analysis probes inspired by human lectins for investigating host-microbe crosstalk. | Ghosh S, Chorghade R, Diehl RC, Dodge GJ, Bae S, Dugan AE, Halim M, Wuo MG, Bartlett H, Herndon L, Kiessling LL, Imperiali B | bioRxiv : the preprint server for biology | 39763805 | bioRxiv | 2024 Dec 25 | https://www.ncbi.nlm.nih.gov/pubmed/39763805 |
| A phase II trial of mitomycin, vincristine, bleomycin, and cisplatin (MOBP) as neoadjuvant therapy in high-risk cervical carcinoma. | Weiner SA, Aristizabal S, Alberts DS, Surwit EA, Deatherage-Deuser K | Gynecologic oncology | 2452769 | Gynecol Oncol | 1988 May | https://www.ncbi.nlm.nih.gov/pubmed/2452769 |
| Glycosaminoglycans compositional analysis of Urodele axolotl (Ambystoma mexicanum) and Porcine Retina. | Kim SY, Kundu J, Williams A, Yandulskaya AS, Monaghan JR, Carrier RL, Linhardt RJ | Glycoconjugate journal | 30963354 | Glycoconj J | 2019 Apr | https://www.ncbi.nlm.nih.gov/pubmed/30963354 |
| Heparin/heparan sulfate analysis by covalently modified reverse polarity capillary zone electrophoresis-mass spectrometry. | Sanderson P, Stickney M, Leach FE 3rd, Xia Q, Yu Y, Zhang F, Linhardt RJ, Amster IJ | Journal of chromatography. A | 29501428 | J Chromatogr A | 2018 Apr 13 | https://www.ncbi.nlm.nih.gov/pubmed/29501428 |
| Glycan Markers of Human Stem Cells Assigned with Beam Search Arrays. | Wu N, Silva LM, Liu Y, Zhang Y, Gao C, Zhang F, Fu L, Peng Y, Linhardt R, Kawasaki T, Mulloy B, Chai W, Feizi T | Molecular & cellular proteomics : MCP | 31308253 | Mol Cell Proteomics | 2019 Oct | https://www.ncbi.nlm.nih.gov/pubmed/31308253 |
| 1D and 2D-HSQC NMR: Two Methods to Distinguish and Characterize Heparin From Different Animal and Tissue Sources. | Mauri L, Marinozzi M, Phatak N, Karfunkle M, St Ange K, Guerrini M, Keire DA, Linhardt RJ | Frontiers in medicine | 31316989 | Front Med (Lausanne) | 2019 | https://www.ncbi.nlm.nih.gov/pubmed/31316989 |
| Functional role of glycosaminoglycans in decellularized lung extracellular matrix. | Uhl FE, Zhang F, Pouliot RA, Uriarte JJ, Rolandsson Enes S, Han X, Ouyang Y, Xia K, Westergren-Thorsson G, Malmström A, Hallgren O, Linhardt RJ, Weiss DJ | Acta biomaterialia | 31751810 | Acta Biomater | 2020 Jan 15 | https://www.ncbi.nlm.nih.gov/pubmed/31751810 |
| Investigation of the Experimental Parameters of Ultraviolet Photodissociation for the Structural Characterization of Chondroitin Sulfate Glycosaminoglycan Isomers. | Pepi LE, Leach FE 3rd, Klein DR, Brodbelt JS, Amster IJ | Journal of the American Society for Mass Spectrometry | 34096288 | J Am Soc Mass Spectrom | 2021 Jul 7 | https://www.ncbi.nlm.nih.gov/pubmed/34096288 |
| The structure-activity relationship of the interactions of SARS-CoV-2 spike glycoproteins with glucuronomannan and sulfated galactofucan from Saccharina japonica. | Jin W, Zhang W, Mitra D, McCandless MG, Sharma P, Tandon R, Zhang F, Linhardt RJ | International journal of biological macromolecules | 32979436 | Int J Biol Macromol | 2020 Nov 15 | https://www.ncbi.nlm.nih.gov/pubmed/32979436 |
| A rolling circle amplification based platform for ultrasensitive detection of heparin. | Lin L , Li B , Han X , Zhang F , Zhang X , Linhardt RJ | The Analyst | 33226386 | Analyst | 2021 Jan 21 | https://www.ncbi.nlm.nih.gov/pubmed/33226386 |
| High density fermentation of probiotic E. coli Nissle 1917 towards heparosan production, characterization, and modification. | Datta P, Fu L, Brodfuerer P, Dordick JS, Linhardt RJ | Applied microbiology and biotechnology | 33481068 | Appl Microbiol Biotechnol | 2021 Feb | https://www.ncbi.nlm.nih.gov/pubmed/33481068 |
| Structural Characterization of Sulfated Glycosaminoglycans Using Charge-Transfer Dissociation. | Pepi LE, Sasiene ZJ, Mendis PM, Jackson GP, Amster IJ | Journal of the American Society for Mass Spectrometry | 32820910 | J Am Soc Mass Spectrom | 2020 Oct 7 | https://www.ncbi.nlm.nih.gov/pubmed/32820910 |
| Filter-entrapment enrichment pull-down assay for glycosaminoglycan structural characterization and protein interaction. | Yu Y, Zhang F, Renois-Predelus G, Amster IJ, Linhardt RJ | Carbohydrate polymers | 32718661 | Carbohydr Polym | 2020 Oct 1 | https://www.ncbi.nlm.nih.gov/pubmed/32718661 |
| Circulating heparin oligosaccharides rapidly target the hippocampus in sepsis, potentially impacting cognitive functions. | Zhang X, Han X, Xia K, Xu Y, Yang Y, Oshima K, Haeger SM, Perez MJ, McMurtry SA, Hippensteel JA, Ford JA, Herson PS, Liu J, Schmidt EP, Linhardt RJ | Proceedings of the National Academy of Sciences of the United States of America | 31010931 | Proc Natl Acad Sci U S A | 2019 May 7 | https://www.ncbi.nlm.nih.gov/pubmed/31010931 |
| Glycosaminoglycan Compositional Analysis of Relevant Tissues in Zika Virus Pathogenesis and in Vitro Evaluation of Heparin as an Antiviral against Zika Virus Infection. | Kim SY, Koetzner CA, Payne AF, Nierode GJ, Yu Y, Wang R, Barr E, Dordick JS, Kramer LD, Zhang F, Linhardt RJ | Biochemistry | 30698412 | Biochemistry | 2019 Feb 26 | https://www.ncbi.nlm.nih.gov/pubmed/30698412 |
| Synthetic heparan sulfate standards and machine learning facilitate the development of solid-state nanopore analysis. | Xia K, Hagan JT, Fu L, Sheetz BS, Bhattacharya S, Zhang F, Dwyer JR, Linhardt RJ | Proceedings of the National Academy of Sciences of the United States of America | 33688052 | Proc Natl Acad Sci U S A | 2021 Mar 16 | https://www.ncbi.nlm.nih.gov/pubmed/33688052 |
| A Revised Structure for the Glycolipid Terminus of Escherichia coli K5 Heparosan Capsular Polysaccharide. | Yan L, Fu L, Xia K, Chen S, Zhang F, Dordick JS, Linhardt RJ | Biomolecules | 33171953 | Biomolecules | 2020 Nov 6 | https://www.ncbi.nlm.nih.gov/pubmed/33171953 |
| Red Algal Sulfated Galactan Binds and Protects Neural Cells from HIV-1 gp120 and Tat. | Pomin VH, Mahdi F, Jin W, Zhang F, Linhardt RJ, Paris JJ | Pharmaceuticals (Basel, Switzerland) | 34451811 | Pharmaceuticals (Basel) | 2021 Jul 23 | https://www.ncbi.nlm.nih.gov/pubmed/34451811 |
| Heparosan Chain Characterization: Sequential Depolymerization of E. Coli K5 Heparosan by a Bacterial Eliminase Heparin Lyase III and a Bacterial Hydrolase Heparanase Bp to Prepare Defined Oligomers. | Datta P, Yan L, Awofiranye A, Dordick JS, Linhardt RJ | Biotechnology journal | 33006278 | Biotechnol J | 2021 Mar | https://www.ncbi.nlm.nih.gov/pubmed/33006278 |
| Structural Characterization of Glycosaminoglycan Carbohydrates Using Ultraviolet Photodissociation. | Klein DR, Leach FE 3rd, Amster IJ, Brodbelt JS | Analytical chemistry | 30932467 | Anal Chem | 2019 May 7 | https://www.ncbi.nlm.nih.gov/pubmed/30932467 |
| Interactions of fibroblast growth factors with sulfated galactofucan from Saccharina japonica. | Jin W, Jiang D, Zhang W, Wang C, Xia K, Zhang F, Linhardt RJ | International journal of biological macromolecules | 32464202 | Int J Biol Macromol | 2020 Oct 1 | https://www.ncbi.nlm.nih.gov/pubmed/32464202 |
| Recent advances in biotechnology for heparin and heparan sulfate analysis. | Qiao M, Lin L, Xia K, Li J, Zhang X, Linhardt RJ | Talanta | 32887160 | Talanta | 2020 Nov 1 | https://www.ncbi.nlm.nih.gov/pubmed/32887160 |
| Chemical O-sulfation of N-sulfoheparosan: a route to rare N-sulfo-3-O-sulfoglucosamine and 2-O-sulfoglucuronic acid. | Yan L, Brodfueher P, Fu L, Zhang F, Chen S, Dordick JS, Linhardt RJ | Glycoconjugate journal | 32778986 | Glycoconj J | 2020 Oct | https://www.ncbi.nlm.nih.gov/pubmed/32778986 |
| Synthesis of selected unnatural sugar nucleotides for biotechnological applications. | Qiao M, Li B, Ji Y, Lin L, Linhardt R, Zhang X | Critical reviews in biotechnology | 33153306 | Crit Rev Biotechnol | 2021 Feb | https://www.ncbi.nlm.nih.gov/pubmed/33153306 |
| Heavy Heparin: A Stable Isotope-Enriched, Chemoenzymatically-Synthesized, Poly-Component Drug. | Cress BF, Bhaskar U, Vaidyanathan D, Williams A, Cai C, Liu X, Fu L, M-Chari V, Zhang F, Mousa SA, Dordick JS, Koffas MAG, Linhardt RJ | Angewandte Chemie (International ed. in English) | 30870573 | Angew Chem Int Ed Engl | 2019 Apr 23 | https://www.ncbi.nlm.nih.gov/pubmed/30870573 |
| Increased CHST15 follows decline in arylsulfatase B (ARSB) and disinhibition of non-canonical WNT signaling: potential impact on epithelial and mesenchymal identity. | Bhattacharyya S, Feferman L, Han X, Xia K, Zhang F, Linhardt RJ, Tobacman JK | Oncotarget | 32595831 | Oncotarget | 2020 Jun 16 | https://www.ncbi.nlm.nih.gov/pubmed/32595831 |
| Analysis of the Glycosaminoglycan Chains of Proteoglycans. | Song Y, Zhang F, Linhardt RJ | The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society | 32623943 | J Histochem Cytochem | 2021 Feb | https://www.ncbi.nlm.nih.gov/pubmed/32623943 |
| A Scoring Algorithm for the Automated Analysis of Glycosaminoglycan MS/MS Data. | Duan J, Pepi L, Amster IJ | Journal of the American Society for Mass Spectrometry | 31673949 | J Am Soc Mass Spectrom | 2019 Dec | https://www.ncbi.nlm.nih.gov/pubmed/31673949 |
| Electron-Activated Tandem Mass Spectrometry Analysis of Glycosaminoglycans. | Pepi LE, Amster IJ | Current protocols | 33798269 | Curr Protoc | 2021 Apr | https://www.ncbi.nlm.nih.gov/pubmed/33798269 |
| Bioengineered production of glycosaminoglycans and their analogues. | Jin W, Zhang F, Linhardt RJ | Systems microbiology and biomanufacturing | 38524245 | Syst Microbiol Biomanuf | 2021 Apr | https://www.ncbi.nlm.nih.gov/pubmed/38524245 |
| Interactions between Sclerostin and Glycosaminoglycans. | Zhang F, Zhao J, Liu X, Linhardt RJ | Glycoconjugate journal | 31828567 | Glycoconj J | 2020 Feb | https://www.ncbi.nlm.nih.gov/pubmed/31828567 |
| High-throughput method for in process monitoring of 3-O-sulfotransferase catalyzed sulfonation in bioengineered heparin synthesis. | Lin L, Yu Y, Zhang F, Zhang X, Linhardt RJ | Analytical biochemistry | 31518551 | Anal Biochem | 2019 Dec 1 | https://www.ncbi.nlm.nih.gov/pubmed/31518551 |
| Comparison of the Interactions of Different Growth Factors and Glycosaminoglycans. | Zhang F, Zheng L, Cheng S, Peng Y, Fu L, Zhang X, Linhardt RJ | Molecules (Basel, Switzerland) | 31527407 | Molecules | 2019 Sep 16 | https://www.ncbi.nlm.nih.gov/pubmed/31527407 |
| Bottom-up and top-down profiling of pentosan polysulfate. | Lin L , Yu Y , Zhang F , Xia K , Zhang X , Linhardt RJ | The Analyst | 31287456 | Analyst | 2019 Aug 5 | https://www.ncbi.nlm.nih.gov/pubmed/31287456 |
| Structural characterization of a clinically described heparin-like substance in plasma causing bleeding. | Yu Y, Bruzdoski K, Kostousov V, Hensch L, Hui SK, Siddiqui F, Farooqui A, Kouta A, Zhang F, Fareed J, Teruya J, Linhardt RJ | Carbohydrate polymers | 32536393 | Carbohydr Polym | 2020 Sep 15 | https://www.ncbi.nlm.nih.gov/pubmed/32536393 |
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| Heparan sulfates from bat and human lung and their binding to the spike protein of SARS-CoV-2 virus. | Yan L, Song Y, Xia K, He P, Zhang F, Chen S, Pouliot R, Weiss DJ, Tandon R, Bates JT, Ederer DR, Mitra D, Sharma P, Davis A, Linhardt RJ | Carbohydrate polymers | 33712145 | Carbohydr Polym | 2021 May 15 | https://www.ncbi.nlm.nih.gov/pubmed/33712145 |
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| An Automated, High-Throughput Method for Interpreting the Tandem Mass Spectra of Glycosaminoglycans. | Duan J, Jonathan Amster I | Journal of the American Society for Mass Spectrometry | 29790112 | J Am Soc Mass Spectrom | 2018 Sep | https://www.ncbi.nlm.nih.gov/pubmed/29790112 |
| Advances in the preparation and synthesis of heparin and related products. | Baytas SN, Linhardt RJ | Drug discovery today | 32947045 | Drug Discov Today | 2020 Dec | https://www.ncbi.nlm.nih.gov/pubmed/32947045 |
| Structural Features of Heparin and Its Interactions With Cellular Prion Protein Measured by Surface Plasmon Resonance. | Kim SY, Zhang F, Harris DA, Linhardt RJ | Frontiers in molecular biosciences | 33324681 | Front Mol Biosci | 2020 | https://www.ncbi.nlm.nih.gov/pubmed/33324681 |
| Unique Cell Surface Mannan of Yeast Pathogen Candida auris with Selective Binding to IgG. | Yan L, Xia K, Yu Y, Miliakos A, Chaturvedi S, Zhang F, Chen S, Chaturvedi V, Linhardt RJ | ACS infectious diseases | 32233507 | ACS Infect Dis | 2020 May 8 | https://www.ncbi.nlm.nih.gov/pubmed/32233507 |
| Elucidating the unusual reaction kinetics of D-glucuronyl C5-epimerase. | Vaidyanathan D, Paskaleva E, Vargason T, Ke X, McCallum SA, Linhardt RJ, Dordick JS | Glycobiology | 32304324 | Glycobiology | 2020 Oct 21 | https://www.ncbi.nlm.nih.gov/pubmed/32304324 |
| Expression of enzymes for 3'-phosphoadenosine-5'-phosphosulfate (PAPS) biosynthesis and their preparation for PAPS synthesis and regeneration. | Datta P, Fu L, He W, Koffas MAG, Dordick JS, Linhardt RJ | Applied microbiology and biotechnology | 32601738 | Appl Microbiol Biotechnol | 2020 Aug | https://www.ncbi.nlm.nih.gov/pubmed/32601738 |
| Online Capillary Zone Electrophoresis Negative Electron Transfer Dissociation Tandem Mass Spectrometry of Glycosaminoglycan Mixtures. | Stickney M, Sanderson P, Leach FE 3rd, Zhang F, Linhardt RJ, Amster IJ | International journal of mass spectrometry | 32641905 | Int J Mass Spectrom | 2019 Nov | https://www.ncbi.nlm.nih.gov/pubmed/32641905 |
| Characterization of heparin and severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) spike glycoprotein binding interactions. | Kim SY, Jin W, Sood A, Montgomery DW, Grant OC, Fuster MM, Fu L, Dordick JS, Woods RJ, Zhang F, Linhardt RJ | Antiviral research | 32653452 | Antiviral Res | 2020 Sep | https://www.ncbi.nlm.nih.gov/pubmed/32653452 |
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| Mammalian cell proliferation requires noncatalytic functions of O-GlcNAc transferase. | Levine ZG, Potter SC, Joiner CM, Fei GQ, Nabet B, Sonnett M, Zachara NE, Gray NS, Paulo JA, Walker S | Proceedings of the National Academy of Sciences of the United States of America | 33419956 | Proc Natl Acad Sci U S A | 2021 Jan 26 | https://www.ncbi.nlm.nih.gov/pubmed/33419956 |
| Inhibiting O-GlcNAcylation impacts p38 and Erk1/2 signaling and perturbs cardiomyocyte hypertrophy. | Papanicolaou KN, Jung J, Ashok D, Zhang W, Modaressanavi A, Avila E, Foster DB, Zachara NE, O'Rourke B | The Journal of biological chemistry | 36642184 | J Biol Chem | 2023 Mar | https://www.ncbi.nlm.nih.gov/pubmed/36642184 |
| Integration of O-GlcNAc into Stress Response Pathways. | Fahie KMM, Papanicolaou KN, Zachara NE | Cells | 36359905 | Cells | 2022 Nov 5 | https://www.ncbi.nlm.nih.gov/pubmed/36359905 |
| Pseudophosphorylation of Arabidopsis jasmonate biosynthesis enzyme lipoxygenase 2 via mutation of Ser(600) inhibits enzyme activity. | Kaur D, Dorion S, Jmii S, Cappadocia L, Bede JC, Rivoal J | The Journal of biological chemistry | 36639029 | J Biol Chem | 2023 Mar | https://www.ncbi.nlm.nih.gov/pubmed/36639029 |
| Detection and Analysis of Proteins Modified by O-Linked N-Acetylglucosamine. | Fahie K, Narayanan B, Zahra F, Reeves R, Fernandes SM, Hart GW, Zachara NE | Current protocols | 34004049 | Curr Protoc | 2021 May | https://www.ncbi.nlm.nih.gov/pubmed/34004049 |
| Cardioprotective O-GlcNAc signaling is elevated in murine female hearts via enhanced O-GlcNAc transferase activity. | Narayanan B, Sinha P, Henry R, Reeves RA, Paolocci N, Kohr MJ, Zachara NE | The Journal of biological chemistry | 37949223 | J Biol Chem | 2023 Dec | https://www.ncbi.nlm.nih.gov/pubmed/37949223 |
| Genetically Encoded Boronolectin as a Specific Red Fluorescent UDP-GlcNAc Biosensor. | Zhang J, Li Z, Pang Y, Fan Y, Ai HW | ACS sensors | 37480329 | ACS Sens | 2023 Aug 25 | https://www.ncbi.nlm.nih.gov/pubmed/37480329 |
| Genetically Encoded Green Fluorescent Biosensors for Monitoring UDP-GlcNAc in Live Cells. | Li Z, Zhang J, Ai HW | ACS central science | 34729420 | ACS Cent Sci | 2021 Oct 27 | https://www.ncbi.nlm.nih.gov/pubmed/34729420 |
| Genetically Encoded Boronolectin as a Specific Red Fluorescent UDP-GlcNAc Biosensor. | Zhang J, Li Z, Pang Y, Fan Y, Ai HW | bioRxiv : the preprint server for biology | 36909602 | bioRxiv | 2023 Mar 1 | https://www.ncbi.nlm.nih.gov/pubmed/36909602 |
| A general strategy to red-shift green fluorescent protein-based biosensors. | Zhang S, Ai HW | Nature chemical biology | 32929278 | Nat Chem Biol | 2020 Dec | https://www.ncbi.nlm.nih.gov/pubmed/32929278 |
| Structural origin and rational development of bright red noncanonical variants of green fluorescent protein. | Chen C, Zhang H, Zhang J, Ai HW, Fang C | Physical chemistry chemical physics : PCCP | 37211909 | Phys Chem Chem Phys | 2023 Jun 15 | https://www.ncbi.nlm.nih.gov/pubmed/37211909 |
| A Rapid LC-MS/MS-PRM Assay for Serologic Quantification of Sialylated O-HPX Glycoforms in Patients with Liver Fibrosis. | Panigrahi A, Benicky J, Wei R, Ahn J, Goldman R, Sanda M | Molecules (Basel, Switzerland) | 35408612 | Molecules | 2022 Mar 29 | https://www.ncbi.nlm.nih.gov/pubmed/35408612 |
| N-Glycosylation is required for secretion of the precursor to brain-derived neurotrophic factor (proBDNF) carrying sulfated LacdiNAc structures. | Benicky J, Sanda M, Brnakova Kennedy Z, Goldman R | The Journal of biological chemistry | 31558607 | J Biol Chem | 2019 Nov 8 | https://www.ncbi.nlm.nih.gov/pubmed/31558607 |
| PD-L1 Glycosylation and Its Impact on Binding to Clinical Antibodies. | Benicky J, Sanda M, Brnakova Kennedy Z, Grant OC, Woods RJ, Zwart A, Goldman R | Journal of proteome research | 33073996 | J Proteome Res | 2021 Jan 1 | https://www.ncbi.nlm.nih.gov/pubmed/33073996 |
| "Ghost" fragment ions in structure and site-specific glycoproteomics analysis. | Campos D, Girgis M, Yang Q, Zong G, Goldman R, Wang LX, Sanda M | bioRxiv : the preprint server for biology | 37292769 | bioRxiv | 2023 May 17 | https://www.ncbi.nlm.nih.gov/pubmed/37292769 |
| GlyGen: Computational and Informatics Resources for Glycoscience. | York WS, Mazumder R, Ranzinger R, Edwards N, Kahsay R, Aoki-Kinoshita KF, Campbell MP, Cummings RD, Feizi T, Martin M, Natale DA, Packer NH, Woods RJ, Agarwal G, Arpinar S, Bhat S, Blake J, Castro LJG, Fochtman B, Gildersleeve J, Goldman R, Holmes X, Jain V, Kulkarni S, Mahadik R, Mehta A, Mousavi R, Nakarakommula S, Navelkar R, Pattabiraman N, Pierce MJ, Ross K, Vasudev P, Vora J, Williamson T, Zhang W | Glycobiology | 31616925 | Glycobiology | 2020 Jan 28 | https://www.ncbi.nlm.nih.gov/pubmed/31616925 |
| A multiplexed microflow LC-MS/MS-PRM assay for serologic quantification of IgG N- and HPX O- glycoforms in liver fibrosis. | Panigrahi A, Zhang L, Benicky J, Sanda M, Ahn J, Goldman R | Scientific reports | 36635317 | Sci Rep | 2023 Jan 12 | https://www.ncbi.nlm.nih.gov/pubmed/36635317 |
| Quantitative Analysis of Sex-Hormone-Binding Globulin Glycosylation in Liver Diseases by Liquid Chromatography-Mass Spectrometry Parallel Reaction Monitoring. | Yuan W, Benicky J, Wei R, Goldman R, Sanda M | Journal of proteome research | 29972295 | J Proteome Res | 2018 Aug 3 | https://www.ncbi.nlm.nih.gov/pubmed/29972295 |
| Glycan-specific precipitation of glycopeptides in high organic content sample solvents used in HILIC. | Kozlik P, Molnarova K, Jecmen T, Krizek T, Goldman R | Journal of chromatography. B, Analytical technologies in the biomedical and life sciences | 32485649 | J Chromatogr B Analyt Technol Biomed Life Sci | 2020 Aug 1 | https://www.ncbi.nlm.nih.gov/pubmed/32485649 |
| "Ghost" Fragment Ions in Structure and Site-Specific Glycoproteomics Analysis. | Campos D, Girgis M, Yang Q, Zong G, Goldman R, Wang LX, Sanda M | Analytical chemistry | 37382290 | Anal Chem | 2023 Jul 11 | https://www.ncbi.nlm.nih.gov/pubmed/37382290 |
| Low Collision Energy Fragmentation in Structure-Specific Glycoproteomics Analysis. | Sanda M, Benicky J, Goldman R | Analytical chemistry | 32441515 | Anal Chem | 2020 Jun 16 | https://www.ncbi.nlm.nih.gov/pubmed/32441515 |
| Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis. | Kawahara R, Chernykh A, Alagesan K, Bern M, Cao W, Chalkley RJ, Cheng K, Choo MS, Edwards N, Goldman R, Hoffmann M, Hu Y, Huang Y, Kim JY, Kletter D, Liquet B, Liu M, Mechref Y, Meng B, Neelamegham S, Nguyen-Khuong T, Nilsson J, Pap A, Park GW, Parker BL, Pegg CL, Penninger JM, Phung TK, Pioch M, Rapp E, Sakalli E, Sanda M, Schulz BL, Scott NE, Sofronov G, Stadlmann J, Vakhrushev SY, Woo CM, Wu HY, Yang P, Ying W, Zhang H, Zhang Y, Zhao J, Zaia J, Haslam SM, Palmisano G, Yoo JS, Larson G, Khoo KH, Medzihradszky KF, Kolarich D, Packer NH, Thaysen-Andersen M | Nature methods | 34725484 | Nat Methods | 2021 Nov | https://www.ncbi.nlm.nih.gov/pubmed/34725484 |
| LC-MS/MS-PRM Quantification of IgG Glycoforms Using Stable Isotope Labeled IgG1 Fc Glycopeptide Standard. | Sanda M, Yang Q, Zong G, Chen H, Zheng Z, Dhani H, Khan K, Kroemer A, Wang LX, Goldman R | Journal of proteome research | 36763792 | J Proteome Res | 2023 Apr 7 | https://www.ncbi.nlm.nih.gov/pubmed/36763792 |
| Analysis of site and structure specific core fucosylation in liver cirrhosis using exoglycosidase-assisted data-independent LC-MS/MS. | Sanda M, Ahn J, Kozlik P, Goldman R | Scientific reports | 34857845 | Sci Rep | 2021 Dec 2 | https://www.ncbi.nlm.nih.gov/pubmed/34857845 |
| Heparan-6-O-Endosulfatase 2 Promotes Invasiveness of Head and Neck Squamous Carcinoma Cell Lines in Co-Cultures with Cancer-Associated Fibroblasts. | Mukherjee P, Zhou X, Benicky J, Panigrahi A, Aljuhani R, Liu J, Ailles L, Pomin VH, Wang Z, Goldman R | Cancers | 37958342 | Cancers (Basel) | 2023 Oct 27 | https://www.ncbi.nlm.nih.gov/pubmed/37958342 |
| Optimized Fragmentation for Quantitative Analysis of Fucosylated N-Glycoproteins by LC-MS-MRM. | Yuan W, Wei R, Goldman R, Sanda M | Analytical chemistry | 31268672 | Anal Chem | 2019 Jul 16 | https://www.ncbi.nlm.nih.gov/pubmed/31268672 |
| Glycoforms of human prostate-specific membrane antigen (PSMA) in human cells and prostate tissue. | Yuan W, Liu B, Sanda M, Wei R, Benicky J, Novakova Z, Barinka C, Goldman R | The Prostate | 34662441 | Prostate | 2022 Jan | https://www.ncbi.nlm.nih.gov/pubmed/34662441 |
| Quantitative analysis of core fucosylation of serum proteins in liver diseases by LC-MS-MRM. | Ma J, Sanda M, Wei R, Zhang L, Goldman R | Journal of proteomics | 29427759 | J Proteomics | 2018 Oct 30 | https://www.ncbi.nlm.nih.gov/pubmed/29427759 |
| N- and O-Glycosylation of the SARS-CoV-2 Spike Protein. | Sanda M, Morrison L, Goldman R | Analytical chemistry | 33406838 | Anal Chem | 2021 Feb 2 | https://www.ncbi.nlm.nih.gov/pubmed/33406838 |
| Probing the contribution of individual polypeptide GalNAc-transferase isoforms to the O-glycoproteome by inducible expression in isogenic cell lines. | Hintze J, Ye Z, Narimatsu Y, Madsen TD, Joshi HJ, Goth CK, Linstedt A, Bachert C, Mandel U, Bennett EP, Vakhrushev SY, Schjoldager KT | The Journal of biological chemistry | 30327431 | J Biol Chem | 2018 Dec 7 | https://www.ncbi.nlm.nih.gov/pubmed/30327431 |
| Site-specific glycosylation of Ebola virus glycoprotein by human polypeptide GalNAc-transferase 1 induces cell adhesion defects. | Simon EJ, Linstedt AD | The Journal of biological chemistry | 30389789 | J Biol Chem | 2018 Dec 21 | https://www.ncbi.nlm.nih.gov/pubmed/30389789 |
| Archaic Hominin Introgression in Africa Contributes to Functional Salivary MUC7 Genetic Variation. | Xu D, Pavlidis P, Taskent RO, Alachiotis N, Flanagan C, DeGiorgio M, Blekhman R, Ruhl S, Gokcumen O | Molecular biology and evolution | 28957509 | Mol Biol Evol | 2017 Oct 1 | https://www.ncbi.nlm.nih.gov/pubmed/28957509 |
| Independent amylase gene copy number bursts correlate with dietary preferences in mammals. | Pajic P, Pavlidis P, Dean K, Neznanova L, Romano RA, Garneau D, Daugherity E, Globig A, Ruhl S, Gokcumen O | eLife | 31084707 | Elife | 2019 May 14 | https://www.ncbi.nlm.nih.gov/pubmed/31084707 |
| Modified Sialic Acids on Mucus and Erythrocytes Inhibit Influenza A Virus Hemagglutinin and Neuraminidase Functions. | Barnard KN, Alford-Lawrence BK, Buchholz DW, Wasik BR, LaClair JR, Yu H, Honce R, Ruhl S, Pajic P, Daugherity EK, Chen X, Schultz-Cherry SL, Aguilar HC, Varki A, Parrish CR | Journal of virology | 32051275 | J Virol | 2020 Apr 16 | https://www.ncbi.nlm.nih.gov/pubmed/32051275 |
| Emergence of saliva protein genes in the secretory calcium-binding phosphoprotein (SCPP) locus and accelerated evolution in primates. | Pajic P, Landau L, Gokcumen O, Ruhl S | bioRxiv : the preprint server for biology | 38405690 | bioRxiv | 2024 Feb 15 | https://www.ncbi.nlm.nih.gov/pubmed/38405690 |
| Streptococcal Siglec-like adhesins recognize different subsets of human plasma glycoproteins: implications for infective endocarditis. | Bensing BA, Li Q, Park D, Lebrilla CB, Sullam PM | Glycobiology | 29796594 | Glycobiology | 2018 Aug 1 | https://www.ncbi.nlm.nih.gov/pubmed/29796594 |
| Human and Nonhuman Primate Lineage-Specific Footprints in the Salivary Proteome. | Thamadilok S, Choi KS, Ruhl L, Schulte F, Kazim AL, Hardt M, Gokcumen O, Ruhl S | Molecular biology and evolution | 31614365 | Mol Biol Evol | 2020 Feb 1 | https://www.ncbi.nlm.nih.gov/pubmed/31614365 |
| The mucin-selective protease StcE enables molecular and functional analysis of human cancer-associated mucins. | Malaker SA, Pedram K, Ferracane MJ, Bensing BA, Krishnan V, Pett C, Yu J, Woods EC, Kramer JR, Westerlind U, Dorigo O, Bertozzi CR | Proceedings of the National Academy of Sciences of the United States of America | 30910957 | Proc Natl Acad Sci U S A | 2019 Apr 9 | https://www.ncbi.nlm.nih.gov/pubmed/30910957 |
| A mechanism of gene evolution generating mucin function. | Pajic P, Shen S, Qu J, May AJ, Knox S, Ruhl S, Gokcumen O | Science advances | 36026444 | Sci Adv | 2022 Aug 26 | https://www.ncbi.nlm.nih.gov/pubmed/36026444 |
| Glycan recognition at the saliva - oral microbiome interface. | Cross BW, Ruhl S | Cellular immunology | 30274839 | Cell Immunol | 2018 Nov | https://www.ncbi.nlm.nih.gov/pubmed/30274839 |
| Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation. | Bensing BA, Stubbs HE, Agarwal R, Yamakawa I, Luong K, Solakyildirim K, Yu H, Hadadianpour A, Castro MA, Fialkowski KP, Morrison KM, Wawrzak Z, Chen X, Lebrilla CB, Baudry J, Smith JC, Sullam PM, Iverson TM | Nature communications | 35585145 | Nat Commun | 2022 May 18 | https://www.ncbi.nlm.nih.gov/pubmed/35585145 |
| Tandem sialoglycan-binding modules in a Streptococcus sanguinis serine-rich repeat adhesin create target dependent avidity effects. | Stubbs HE, Bensing BA, Yamakawa I, Sharma P, Yu H, Chen X, Sullam PM, Iverson TM | The Journal of biological chemistry | 32820052 | J Biol Chem | 2020 Oct 23 | https://www.ncbi.nlm.nih.gov/pubmed/32820052 |
| Multiplex glycan bead array for high throughput and high content analyses of glycan binding proteins. | Purohit S, Li T, Guan W, Song X, Song J, Tian Y, Li L, Sharma A, Dun B, Mysona D, Ghamande S, Rungruang B, Cummings RD, Wang PG, She JX | Nature communications | 29343722 | Nat Commun | 2018 Jan 17 | https://www.ncbi.nlm.nih.gov/pubmed/29343722 |
| Multiplex Glycan Bead Array (MGBA ) for High Throughput and High Content Analyses of Glycan-Binding Proteins Including Natural Anti-Glycan Antibodies. | Purohit S, She JX | Methods in molecular biology (Clifton, N.J.) | 34972929 | Methods Mol Biol | 2022 | https://www.ncbi.nlm.nih.gov/pubmed/34972929 |
| Use of a glycomics array to establish the anti-carbohydrate antibody repertoire in type 1 diabetes. | Tran PMH, Dong F, Kim E, Richardson KP, Tran LKH, Waugh K, Hopkins D, Cummings RD, Wang PG, Rewers MJ, She JX, Purohit S | Nature communications | 36316364 | Nat Commun | 2022 Nov 1 | https://www.ncbi.nlm.nih.gov/pubmed/36316364 |
| A Phase I Clinical Trial of Guadecitabine and Carboplatin in Platinum-Resistant, Recurrent Ovarian Cancer: Clinical, Pharmacokinetic, and Pharmacodynamic Analyses. | Matei D, Ghamande S, Roman L, Alvarez Secord A, Nemunaitis J, Markham MJ, Nephew KP, Jueliger S, Oganesian A, Naim S, Su XY, Keer H, Azab M, Fleming GF | Clinical cancer research : an official journal of the American Association for Cancer Research | 29500276 | Clin Cancer Res | 2018 May 15 | https://www.ncbi.nlm.nih.gov/pubmed/29500276 |
| Clinical calculator predictive of chemotherapy benefit in stage 1A uterine papillary serous cancers. | Mysona DP, Tran LKH, Tran PMH, Gehrig PA, Van Le L, Ghamande S, Rungruang BJ, Java J, Mann AK, Liao J, Kapp DS, Santos BD, She JX, Chan JK | Gynecologic oncology | 31796203 | Gynecol Oncol | 2020 Jan | https://www.ncbi.nlm.nih.gov/pubmed/31796203 |
| Better survival is observed in cervical cancer patients positive for specific anti-glycan antibodies and receiving brachytherapy. | Purohit S, Ferris DG, Alvarez M, Tran PMH, Tran LKH, Mysona DP, Hopkins D, Zhi W, Dun B, Wallbillich JJ, Cummings RD, Wang PG, She JX | Gynecologic oncology | 31955861 | Gynecol Oncol | 2020 Apr | https://www.ncbi.nlm.nih.gov/pubmed/31955861 |
| Pleiotrophin interacts with glycosaminoglycans in a highly flexible and adaptable manner. | Ryan E, Shen D, Wang X | FEBS letters | 33529353 | FEBS Lett | 2021 Apr | https://www.ncbi.nlm.nih.gov/pubmed/33529353 |
| Glycosaminoglycan-Protein Interactions by Nuclear Magnetic Resonance (NMR) Spectroscopy. | Pomin VH, Wang X | Molecules (Basel, Switzerland) | 30208595 | Molecules | 2018 Sep 11 | https://www.ncbi.nlm.nih.gov/pubmed/30208595 |
| Synthetic Oligosaccharide Libraries and Microarray Technology: A Powerful Combination for the Success of Current Glycosaminoglycan Interactomics. | Pomin VH, Wang X | ChemMedChem | 29160016 | ChemMedChem | 2018 Apr 6 | https://www.ncbi.nlm.nih.gov/pubmed/29160016 |
| Deep Sequencing of Complex Proteoglycans: A Novel Strategy for High Coverage and Site-specific Identification of Glycosaminoglycan-linked Peptides. | Klein JA, Meng L, Zaia J | Molecular & cellular proteomics : MCP | 29773674 | Mol Cell Proteomics | 2018 Aug | https://www.ncbi.nlm.nih.gov/pubmed/29773674 |
| Software for Peak Finding and Elemental Composition Assignment for Glycosaminoglycan Tandem Mass Spectra. | Hogan JD, Klein JA, Wu J, Chopra P, Boons GJ, Carvalho L, Lin C, Zaia J | Molecular & cellular proteomics : MCP | 29615495 | Mol Cell Proteomics | 2018 Jul | https://www.ncbi.nlm.nih.gov/pubmed/29615495 |
| psims - A Declarative Writer for mzML and mzIdentML for Python. | Klein J, Zaia J | Molecular & cellular proteomics : MCP | 30563850 | Mol Cell Proteomics | 2019 Mar | https://www.ncbi.nlm.nih.gov/pubmed/30563850 |
| Proteomics, Glycomics, and Glycoproteomics of Matrisome Molecules. | Raghunathan R, Sethi MK, Klein JA, Zaia J | Molecular & cellular proteomics : MCP | 31471497 | Mol Cell Proteomics | 2019 Nov | https://www.ncbi.nlm.nih.gov/pubmed/31471497 |
| On-slide tissue digestion for mass spectrometry based glycomic and proteomic profiling. | Raghunathan R, Sethi MK, Zaia J | MethodsX | 31660297 | MethodsX | 2019 | https://www.ncbi.nlm.nih.gov/pubmed/31660297 |
| A Perspective on the Confident Comparison of Glycoprotein Site-Specific Glycosylation in Sample Cohorts. | Klein JA, Zaia J | Biochemistry | 31833756 | Biochemistry | 2020 Sep 1 | https://www.ncbi.nlm.nih.gov/pubmed/31833756 |
| Glycomic and Proteomic Changes in Aging Brain Nigrostriatal Pathway. | Raghunathan R, Polinski NK, Klein JA, Hogan JD, Shao C, Khatri K, Leon D, McComb ME, Manfredsson FP, Sortwell CE, Zaia J | Molecular & cellular proteomics : MCP | 29915149 | Mol Cell Proteomics | 2018 Sep | https://www.ncbi.nlm.nih.gov/pubmed/29915149 |
| Influence of saccharide modifications on heparin lyase III substrate specificities. | Wu J, Chopra P, Boons GJ, Zaia J | Glycobiology | 33822051 | Glycobiology | 2022 Mar 30 | https://www.ncbi.nlm.nih.gov/pubmed/33822051 |
| Glycoproteomic Sample Processing, LC-MS, and Data Analysis Using GlycReSoft. | Wang M, Shajahan A, Pepi LE, Azadi P, Zaia J | Current protocols | 33761173 | Curr Protoc | 2021 Mar | https://www.ncbi.nlm.nih.gov/pubmed/33761173 |
| GAGrank: Software for Glycosaminoglycan Sequence Ranking Using a Bipartite Graph Model. | Hogan JD, Wu J, Klein JA, Lin C, Carvalho L, Zaia J | Molecular & cellular proteomics : MCP | 33992776 | Mol Cell Proteomics | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/33992776 |
| RAMZIS: a bioinformatic toolkit for rigorous assessment of the alterations to glycoprotein structure that occur during biological processes. | Hackett WE, Chang D, Carvalho L, Zaia J | bioRxiv : the preprint server for biology | 37398011 | bioRxiv | 2023 Jun 1 | https://www.ncbi.nlm.nih.gov/pubmed/37398011 |
| Characterization and Quantification of Highly Sulfated Glycosaminoglycan Isomers by Gated-Trapped Ion Mobility Spectrometry Negative Electron Transfer Dissociation MS/MS. | Wei J, Wu J, Tang Y, Ridgeway ME, Park MA, Costello CE, Zaia J, Lin C | Analytical chemistry | 30649866 | Anal Chem | 2019 Feb 19 | https://www.ncbi.nlm.nih.gov/pubmed/30649866 |
| N-glycosylation in Spodoptera frugiperda (Lepidoptera: Noctuidae) midgut membrane-bound glycoproteins. | Fuzita FJ, Chandler KB, Haserick JR, Terra WR, Ferreira C, Costello CE | Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology | 32553552 | Comp Biochem Physiol B Biochem Mol Biol | 2020 Aug-Sep | https://www.ncbi.nlm.nih.gov/pubmed/32553552 |
| Glycosylation of Serum Clusterin in Wild-Type Transthyretin-Associated (ATTRwt) Amyloidosis: A Study of Disease-Associated Compositional Features Using Mass Spectrometry Analyses. | Torres-Arancivia CM, Chang D, Hackett WE, Zaia J, Connors LH | Biochemistry | 33141553 | Biochemistry | 2020 Nov 17 | https://www.ncbi.nlm.nih.gov/pubmed/33141553 |
| In-Depth Matrisome and Glycoproteomic Analysis of Human Brain Glioblastoma Versus Control Tissue. | Sethi MK, Downs M, Shao C, Hackett WE, Phillips JJ, Zaia J | Molecular & cellular proteomics : MCP | 35202840 | Mol Cell Proteomics | 2022 Apr | https://www.ncbi.nlm.nih.gov/pubmed/35202840 |
| Data-independent acquisition mass spectrometry for site-specific glycoproteomics characterization of SARS-CoV-2 spike protein. | Chang D, Klein JA, Nalehua MR, Hackett WE, Zaia J | Analytical and bioanalytical chemistry | 34635934 | Anal Bioanal Chem | 2021 Dec | https://www.ncbi.nlm.nih.gov/pubmed/34635934 |
| Characterization of Isomeric Glycans by Reversed Phase Liquid Chromatography-Electronic Excitation Dissociation Tandem Mass Spectrometry. | Tang Y, Wei J, Costello CE, Lin C | Journal of the American Society for Mass Spectrometry | 29654534 | J Am Soc Mass Spectrom | 2018 Jun | https://www.ncbi.nlm.nih.gov/pubmed/29654534 |
| Lectin-mediated binding and sialoglycans of porcine surfactant protein D synergistically neutralize influenza A virus. | van Eijk M, Rynkiewicz MJ, Khatri K, Leymarie N, Zaia J, White MR, Hartshorn KL, Cafarella TR, van Die I, Hessing M, Seaton BA, Haagsman HP | The Journal of biological chemistry | 29769321 | J Biol Chem | 2018 Jul 6 | https://www.ncbi.nlm.nih.gov/pubmed/29769321 |
| Improving Statistical Certainty of Glycosylation Similarity between Influenza A Virus Variants Using Data-Independent Acquisition Mass Spectrometry. | Chang D, Klein J, Hackett WE, Nalehua MR, Wan XF, Zaia J | Molecular & cellular proteomics : MCP | 36103992 | Mol Cell Proteomics | 2022 Nov | https://www.ncbi.nlm.nih.gov/pubmed/36103992 |
| The 3-O-sulfation of heparan sulfate modulates protein binding and lyase degradation. | Chopra P, Joshi A, Wu J, Lu W, Yadavalli T, Wolfert MA, Shukla D, Zaia J, Boons GJ | Proceedings of the National Academy of Sciences of the United States of America | 33441484 | Proc Natl Acad Sci U S A | 2021 Jan 19 | https://www.ncbi.nlm.nih.gov/pubmed/33441484 |
| Toward Automatic and Comprehensive Glycan Characterization by Online PGC-LC-EED MS/MS. | Wei J, Tang Y, Bai Y, Zaia J, Costello CE, Hong P, Lin C | Analytical chemistry | 31829560 | Anal Chem | 2020 Jan 7 | https://www.ncbi.nlm.nih.gov/pubmed/31829560 |
| Serial in-solution digestion protocol for mass spectrometry-based glycomics and proteomics analysis. | Sethi MK, Downs M, Zaia J | Molecular omics | 32309832 | Mol Omics | 2020 Aug 1 | https://www.ncbi.nlm.nih.gov/pubmed/32309832 |
| A glycomics and proteomics study of aging and Parkinson's disease in human brain. | Raghunathan R, Hogan JD, Labadorf A, Myers RH, Zaia J | Scientific reports | 32733076 | Sci Rep | 2020 Jul 30 | https://www.ncbi.nlm.nih.gov/pubmed/32733076 |
| Negative Electron Transfer Dissociation Sequencing of 3-O-Sulfation-Containing Heparan Sulfate Oligosaccharides. | Wu J, Wei J, Hogan JD, Chopra P, Joshi A, Lu W, Klein J, Boons GJ, Lin C, Zaia J | Journal of the American Society for Mass Spectrometry | 29564812 | J Am Soc Mass Spectrom | 2018 Jun | https://www.ncbi.nlm.nih.gov/pubmed/29564812 |
| Sensitive method for glycosaminoglycan analysis of tissue sections. | Turiák L, Tóth G, Ozohanics O, Révész Á, Ács A, Vékey K, Zaia J, Drahos L | Journal of chromatography. A | 29506752 | J Chromatogr A | 2018 Apr 6 | https://www.ncbi.nlm.nih.gov/pubmed/29506752 |
| Comprehensive Glycomic and Proteomic Analysis of Mouse Striatum and Lateral Hypothalamus Following Repeated Exposures to Cocaine or Methamphetamine. | Sethi MK, Maccioni R, Hogan JD, Kawamura T, Repunte-Canonigo V, Chen J, Zaia J, Sanna PP | Molecular & cellular proteomics : MCP | 38880242 | Mol Cell Proteomics | 2024 Aug | https://www.ncbi.nlm.nih.gov/pubmed/38880242 |
| Sequencing Heparan Sulfate Using HILIC LC-NETD-MS/MS. | Wu J, Wei J, Chopra P, Boons GJ, Lin C, Zaia J | Analytical chemistry | 31423779 | Anal Chem | 2019 Sep 17 | https://www.ncbi.nlm.nih.gov/pubmed/31423779 |
| glypy: An Open Source Glycoinformatics Library. | Klein J, Zaia J | Journal of proteome research | 31310539 | J Proteome Res | 2019 Sep 6 | https://www.ncbi.nlm.nih.gov/pubmed/31310539 |
| Why Glycosylation Matters in Building a Better Flu Vaccine. | Chang D, Zaia J | Molecular & cellular proteomics : MCP | 31604803 | Mol Cell Proteomics | 2019 Dec | https://www.ncbi.nlm.nih.gov/pubmed/31604803 |
| Resolving Heparan Sulfate Oligosaccharide Positional Isomers Using Hydrophilic Interaction Liquid Chromatography-Cyclic Ion Mobility Mass Spectrometry. | Cavallero GJ, Zaia J | Analytical chemistry | 35090117 | Anal Chem | 2022 Feb 8 | https://www.ncbi.nlm.nih.gov/pubmed/35090117 |
| Application of network smoothing to glycan LC-MS profiling. | Klein J, Carvalho L, Zaia J | Bioinformatics (Oxford, England) | 29790907 | Bioinformatics | 2018 Oct 15 | https://www.ncbi.nlm.nih.gov/pubmed/29790907 |
| Proteomic and biological profiling of extracellular vesicles from Alzheimer's disease human brain tissues. | Muraoka S, DeLeo AM, Sethi MK, Yukawa-Takamatsu K, Yang Z, Ko J, Hogan JD, Ruan Z, You Y, Wang Y, Medalla M, Ikezu S, Chen M, Xia W, Gorantla S, Gendelman HE, Issadore D, Zaia J, Ikezu T | Alzheimer's & dementia : the journal of the Alzheimer's Association | 32301581 | Alzheimers Dement | 2020 Jun | https://www.ncbi.nlm.nih.gov/pubmed/32301581 |
| Measuring Site-specific Glycosylation Similarity between Influenza a Virus Variants with Statistical Certainty. | Chang D, Hackett WE, Zhong L, Wan XF, Zaia J | Molecular & cellular proteomics : MCP | 32601173 | Mol Cell Proteomics | 2020 Sep | https://www.ncbi.nlm.nih.gov/pubmed/32601173 |
| Calculating Glycoprotein Similarities From Mass Spectrometric Data. | Hackett WE, Zaia J | Molecular & cellular proteomics : MCP | 32883803 | Mol Cell Proteomics | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/32883803 |
| β-Catenin/CBP inhibition alters epidermal growth factor receptor fucosylation status in oral squamous cell carcinoma. | Chandler KB, Alamoud KA, Stahl VL, Nguyen BC, Kartha VK, Bais MV, Nomoto K, Owa T, Monti S, Kukuruzinska MA, Costello CE | Molecular omics | 32203567 | Mol Omics | 2020 Jun 1 | https://www.ncbi.nlm.nih.gov/pubmed/32203567 |
| Relative Retention Time Estimation Improves N-Glycopeptide Identifications by LC-MS/MS. | Klein J, Zaia J | Journal of proteome research | 32223173 | J Proteome Res | 2020 May 1 | https://www.ncbi.nlm.nih.gov/pubmed/32223173 |
| Synthesis of Functionalized N-Acetyl Muramic Acids To Probe Bacterial Cell Wall Recycling and Biosynthesis. | DeMeester KE, Liang H, Jensen MR, Jones ZS, D'Ambrosio EA, Scinto SL, Zhou J, Grimes CL | Journal of the American Chemical Society | 29986130 | J Am Chem Soc | 2018 Aug 1 | https://www.ncbi.nlm.nih.gov/pubmed/29986130 |
| Investigating Peptidoglycan Recycling Pathways in Tannerella forsythia with N-Acetylmuramic Acid Bioorthogonal Probes. | Wodzanowski KA, Hyland SN, Chinthamani S, Sandles LD, Honma K, Sharma A, Grimes CL | ACS infectious diseases | 35924866 | ACS Infect Dis | 2022 Sep 9 | https://www.ncbi.nlm.nih.gov/pubmed/35924866 |
| Cell morphology as a virulence determinant: lessons from Helicobacter pylori. | Salama NR | Current opinion in microbiology | 32014717 | Curr Opin Microbiol | 2020 Apr | https://www.ncbi.nlm.nih.gov/pubmed/32014717 |
| Membrane-partitioned cell wall synthesis in mycobacteria. | García-Heredia A, Kado T, Sein CE, Puffal J, Osman SH, Judd J, Gray TA, Morita YS, Siegrist MS | eLife | 33544079 | Elife | 2021 Feb 5 | https://www.ncbi.nlm.nih.gov/pubmed/33544079 |
| Tools for probing host-bacteria interactions in the gut microenvironment: From molecular to cellular levels. | Wodzanowski KA, Cassel SE, Grimes CL, Kloxin AM | Bioorganic & medicinal chemistry letters | 32223923 | Bioorg Med Chem Lett | 2020 May 15 | https://www.ncbi.nlm.nih.gov/pubmed/32223923 |
| Metabolic Incorporation of N-Acetyl Muramic Acid Probes into Bacterial Peptidoglycan. | DeMeester KE, Liang H, Zhou J, Wodzanowski KA, Prather BL, Santiago CC, Grimes CL | Current protocols in chemical biology | 31763799 | Curr Protoc Chem Biol | 2019 Dec | https://www.ncbi.nlm.nih.gov/pubmed/31763799 |
| Protected N-Acetyl Muramic Acid Probes Improve Bacterial Peptidoglycan Incorporation via Metabolic Labeling. | Brown AR, Wodzanowski KA, Santiago CC, Hyland SN, Follmar JL, Asare-Okai P, Grimes CL | ACS chemical biology | 34506714 | ACS Chem Biol | 2021 Oct 15 | https://www.ncbi.nlm.nih.gov/pubmed/34506714 |
| Chemical Biology Tools for Examining the Bacterial Cell Wall. | Brown AR, Gordon RA, Hyland SN, Siegrist MS, Grimes CL | Cell chemical biology | 32822617 | Cell Chem Biol | 2020 Aug 20 | https://www.ncbi.nlm.nih.gov/pubmed/32822617 |
| A two-track model for the spatiotemporal coordination of bacterial septal cell wall synthesis revealed by single-molecule imaging of FtsW. | Yang X, McQuillen R, Lyu Z, Phillips-Mason P, De La Cruz A, McCausland JW, Liang H, DeMeester KE, Santiago CC, Grimes CL, de Boer P, Xiao J | Nature microbiology | 33495624 | Nat Microbiol | 2021 May | https://www.ncbi.nlm.nih.gov/pubmed/33495624 |
| Utility of bacterial peptidoglycan recycling enzymes in the chemoenzymatic synthesis of valuable UDP sugar substrates. | Ukaegbu OI, DeMeester KE, Liang H, Brown AR, Jones ZS, Grimes CL | Methods in enzymology | 32416908 | Methods Enzymol | 2020 | https://www.ncbi.nlm.nih.gov/pubmed/32416908 |
| DivIVA concentrates mycobacterial cell envelope assembly for initiation and stabilization of polar growth. | Melzer ES, Sein CE, Chambers JJ, Siegrist MS | Cytoskeleton (Hoboken, N.J.) | 30160378 | Cytoskeleton (Hoboken) | 2018 Dec | https://www.ncbi.nlm.nih.gov/pubmed/30160378 |
| Coupling Novel Probes with Molecular Localization Microscopy Reveals Cell Wall Homeostatic Mechanisms in Staphylococcus aureus. | Lund VA, Gangotra H, Zhao Z, Sutton JAF, Wacnik K, DeMeester K, Liang H, Santiago C, Leimkuhler Grimes C, Jones S, Foster SJ | ACS chemical biology | 36414253 | ACS Chem Biol | 2022 Dec 16 | https://www.ncbi.nlm.nih.gov/pubmed/36414253 |
| Distinct cytoskeletal proteins define zones of enhanced cell wall synthesis in Helicobacter pylori. | Taylor JA, Bratton BP, Sichel SR, Blair KM, Jacobs HM, DeMeester KE, Kuru E, Gray J, Biboy J, VanNieuwenhze MS, Vollmer W, Grimes CL, Shaevitz JW, Salama NR | eLife | 31916938 | Elife | 2020 Jan 9 | https://www.ncbi.nlm.nih.gov/pubmed/31916938 |
| Peptidoglycan precursor synthesis along the sidewall of pole-growing mycobacteria. | García-Heredia A, Pohane AA, Melzer ES, Carr CR, Fiolek TJ, Rundell SR, Lim HC, Wagner JC, Morita YS, Swarts BM, Siegrist MS | eLife | 30198841 | Elife | 2018 Sep 10 | https://www.ncbi.nlm.nih.gov/pubmed/30198841 |
| Localizing Peptidoglycan Synthesis in Helicobacter pylori using Clickable Metabolic Probes. | Taylor JA, Santiago CC, Gray J, Wodzanowski KA, DeMeester KE, Biboy J, Vollmer W, Grimes CL, Salama NR | Current protocols | 33844460 | Curr Protoc | 2021 Apr | https://www.ncbi.nlm.nih.gov/pubmed/33844460 |
| Minimalist Tetrazine N-Acetyl Muramic Acid Probes for Rapid and Efficient Labeling of Commensal and Pathogenic Peptidoglycans in Living Bacterial Culture and During Macrophage Invasion. | Hillman AS, Hyland SN, Wodzanowski KA, Moore DL, Ratna S, Jemas A, Sandles LD, Chaya T, Ghosh A, Fox JM, Grimes CL | Journal of the American Chemical Society | 38427023 | J Am Chem Soc | 2024 Mar 13 | https://www.ncbi.nlm.nih.gov/pubmed/38427023 |
| Sweet Control: MicroRNA Regulation of the Glycome. | Thu CT, Mahal LK | Biochemistry | 31585501 | Biochemistry | 2020 Sep 1 | https://www.ncbi.nlm.nih.gov/pubmed/31585501 |
| High-Throughput miRFluR Platform Identifies miRNA Regulating B3GLCT That Predict Peters' Plus Syndrome Phenotype, Supporting the miRNA Proxy Hypothesis. | Thu CT, Chung JY, Dhawan D, Vaiana CA, Mahal LK | ACS chemical biology | 34085516 | ACS Chem Biol | 2021 Oct 15 | https://www.ncbi.nlm.nih.gov/pubmed/34085516 |
| GlycoEnzOnto: a GlycoEnzyme pathway and molecular function ontology. | Groth T, Diehl AD, Gunawan R, Neelamegham S | Bioinformatics (Oxford, England) | 36282863 | Bioinformatics | 2022 Dec 13 | https://www.ncbi.nlm.nih.gov/pubmed/36282863 |
| Applying Pose Clustering and MD Simulations To Eliminate False Positives in Molecular Docking. | Makeneni S, Thieker DF, Woods RJ | Journal of chemical information and modeling | 29431438 | J Chem Inf Model | 2018 Mar 26 | https://www.ncbi.nlm.nih.gov/pubmed/29431438 |
| Defining the Specificity of Carbohydrate-Protein Interactions by Quantifying Functional Group Contributions. | Sood A, Gerlits OO, Ji Y, Bovin NV, Coates L, Woods RJ | Journal of chemical information and modeling | 30086239 | J Chem Inf Model | 2018 Sep 24 | https://www.ncbi.nlm.nih.gov/pubmed/30086239 |
| GAG Builder: a web-tool for modeling 3D structures of glycosaminoglycans. | Singh A, Montgomery D, Xue X, Foley BL, Woods RJ | Glycobiology | 31034567 | Glycobiology | 2019 Jul 1 | https://www.ncbi.nlm.nih.gov/pubmed/31034567 |
| O-glycosylation on cerebrospinal fluid and plasma apolipoprotein E differs in the lipid-binding domain. | Flowers SA, Grant OC, Woods RJ, Rebeck GW | Glycobiology | 31616924 | Glycobiology | 2020 Jan 28 | https://www.ncbi.nlm.nih.gov/pubmed/31616924 |
| Virus-Receptor Interactions of Glycosylated SARS-CoV-2 Spike and Human ACE2 Receptor. | Zhao P, Praissman JL, Grant OC, Cai Y, Xiao T, Rosenbalm KE, Aoki K, Kellman BP, Bridger R, Barouch DH, Brindley MA, Lewis NE, Tiemeyer M, Chen B, Woods RJ, Wells L | Cell host & microbe | 32841605 | Cell Host Microbe | 2020 Oct 7 | https://www.ncbi.nlm.nih.gov/pubmed/32841605 |
| A combined computational-experimental approach to define the structural origin of antibody recognition of sialyl-Tn, a tumor-associated carbohydrate antigen. | Amon R, Grant OC, Leviatan Ben-Arye S, Makeneni S, Nivedha AK, Marshanski T, Norn C, Yu H, Glushka JN, Fleishman SJ, Chen X, Woods RJ, Padler-Karavani V | Scientific reports | 30018351 | Sci Rep | 2018 Jul 17 | https://www.ncbi.nlm.nih.gov/pubmed/30018351 |
| Downstream Products are Potent Inhibitors of the Heparan Sulfate 2-O-Sulfotransferase. | Thieker DF, Xu Y, Chapla D, Nora C, Qiu H, Felix T, Wang L, Moremen KW, Liu J, Esko JD, Woods RJ | Scientific reports | 30087361 | Sci Rep | 2018 Aug 7 | https://www.ncbi.nlm.nih.gov/pubmed/30087361 |
| Predicting the Structures of Glycans, Glycoproteins, and Their Complexes. | Woods RJ | Chemical reviews | 30091597 | Chem Rev | 2018 Sep 12 | https://www.ncbi.nlm.nih.gov/pubmed/30091597 |
| A Traveling Wave Ion Mobility Spectrometry (TWIMS) Study of the Robo1-Heparan Sulfate Interaction. | Zhao Y, Yang JY, Thieker DF, Xu Y, Zong C, Boons GJ, Liu J, Woods RJ, Moremen KW, Amster IJ | Journal of the American Society for Mass Spectrometry | 29520710 | J Am Soc Mass Spectrom | 2018 Jun | https://www.ncbi.nlm.nih.gov/pubmed/29520710 |
| Enhanced Human-Type Receptor Binding by Ferret-Transmissible H5N1 with a K193T Mutation. | Peng W, Bouwman KM, McBride R, Grant OC, Woods RJ, Verheije MH, Paulson JC, de Vries RP | Journal of virology | 29491160 | J Virol | 2018 May 15 | https://www.ncbi.nlm.nih.gov/pubmed/29491160 |
| Induction of Antibodies Directed Against Branched Core O-Mannosyl Glycopeptides-Selectivity Complimentary to the ConA Lectin. | Yu J, Grant OC, Pett C, Strahl S, Stahl S, Woods RJ, Westerlind U | Chemistry (Weinheim an der Bergstrasse, Germany) | 28079948 | Chemistry | 2017 Mar 8 | https://www.ncbi.nlm.nih.gov/pubmed/28079948 |
| Reconciling MA'AT and molecular dynamics models of linkage conformation in oligosaccharides. | Meredith RJ, Woods RJ, Carmichael I, Serianni AS | Physical chemistry chemical physics : PCCP | 32597425 | Phys Chem Chem Phys | 2020 Jul 8 | https://www.ncbi.nlm.nih.gov/pubmed/32597425 |
| Hierarchical Multivalent Effects Control Influenza Host Specificity. | Overeem NJ, Hamming PHE, Grant OC, Di Iorio D, Tieke M, Bertolino MC, Li Z, Vos G, de Vries RP, Woods RJ, Tito NB, Boons GPH, van der Vries E, Huskens J | ACS central science | 33376792 | ACS Cent Sci | 2020 Dec 23 | https://www.ncbi.nlm.nih.gov/pubmed/33376792 |
| Comparison of cellooligosaccharide conformations in complexes with proteins with energy maps for cellobiose. | French AD, Montgomery DW, Prevost NT, Edwards JV, Woods RJ | Carbohydrate polymers | 33910736 | Carbohydr Polym | 2021 Jul 15 | https://www.ncbi.nlm.nih.gov/pubmed/33910736 |
| Virus-Receptor Interactions of Glycosylated SARS-CoV-2 Spike and Human ACE2 Receptor. | Zhao P, Praissman JL, Grant OC, Cai Y, Xiao T, Rosenbalm KE, Aoki K, Kellman BP, Bridger R, Barouch DH, Brindley MA, Lewis NE, Tiemeyer M, Chen B, Woods RJ, Wells L | bioRxiv : the preprint server for biology | 32743578 | bioRxiv | 2020 Jul 24 | https://www.ncbi.nlm.nih.gov/pubmed/32743578 |
| Fluorescent Trimeric Hemagglutinins Reveal Multivalent Receptor Binding Properties. | Nemanichvili N, Tomris I, Turner HL, McBride R, Grant OC, van der Woude R, Aldosari MH, Pieters RJ, Woods RJ, Paulson JC, Boons GJ, Ward AB, Verheije MH, de Vries RP | Journal of molecular biology | 30597163 | J Mol Biol | 2019 Feb 15 | https://www.ncbi.nlm.nih.gov/pubmed/30597163 |
| Rapidly Display Glycan Symbols in 3D Structures: 3D-SNFG in LiteMol. | Sehnal D, Grant OC | Journal of proteome research | 30179493 | J Proteome Res | 2019 Feb 1 | https://www.ncbi.nlm.nih.gov/pubmed/30179493 |
| Gly-Spec: a webtool for predicting glycan specificity by integrating glycan array screening data and 3D structure. | Grant OC, Xue X, Ra D, Khatamian A, Foley BL, Woods RJ | Glycobiology | 28120784 | Glycobiology | 2016 Oct | https://www.ncbi.nlm.nih.gov/pubmed/28120784 |
| Allosteric regulation of lysosomal enzyme recognition by the cation-independent mannose 6-phosphate receptor. | Olson LJ, Misra SK, Ishihara M, Battaile KP, Grant OC, Sood A, Woods RJ, Kim JP, Tiemeyer M, Ren G, Sharp JS, Dahms NM | Communications biology | 32908216 | Commun Biol | 2020 Sep 9 | https://www.ncbi.nlm.nih.gov/pubmed/32908216 |
| Recent H3N2 Viruses Have Evolved Specificity for Extended, Branched Human-type Receptors, Conferring Potential for Increased Avidity. | Peng W, de Vries RP, Grant OC, Thompson AJ, McBride R, Tsogtbaatar B, Lee PS, Razi N, Wilson IA, Woods RJ, Paulson JC | Cell host & microbe | 28017661 | Cell Host Microbe | 2017 Jan 11 | https://www.ncbi.nlm.nih.gov/pubmed/28017661 |
| Conformational Populations of β-(1→4) O-Glycosidic Linkages Using Redundant NMR J-Couplings and Circular Statistics. | Zhang W, Turney T, Meredith R, Pan Q, Sernau L, Wang X, Hu X, Woods RJ, Carmichael I, Serianni AS | The journal of physical chemistry. B | 28296420 | J Phys Chem B | 2017 Apr 13 | https://www.ncbi.nlm.nih.gov/pubmed/28296420 |
| Structural Analysis of the Glycosylated Intact HIV-1 gp120-b12 Antibody Complex Using Hydroxyl Radical Protein Footprinting. | Li X, Grant OC, Ito K, Wallace A, Wang S, Zhao P, Wells L, Lu S, Woods RJ, Sharp JS | Biochemistry | 28102671 | Biochemistry | 2017 Feb 21 | https://www.ncbi.nlm.nih.gov/pubmed/28102671 |
| Effect of hydroxylysine-O-glycosylation on the structure of type I collagen molecule: A computational study. | Tang M, Wang X, Gandhi NS, Foley BL, Burrage K, Woods RJ, Gu Y | Glycobiology | 32188979 | Glycobiology | 2020 Sep 28 | https://www.ncbi.nlm.nih.gov/pubmed/32188979 |
| New insights into influenza A specificity: an evolution of paradigms. | Ji Y, White YJ, Hadden JA, Grant OC, Woods RJ | Current opinion in structural biology | 28675835 | Curr Opin Struct Biol | 2017 Jun | https://www.ncbi.nlm.nih.gov/pubmed/28675835 |
| O(2) sensing-associated glycosylation exposes the F-box-combining site of the Dictyostelium Skp1 subunit in E3 ubiquitin ligases. | Sheikh MO, Thieker D, Chalmers G, Schafer CM, Ishihara M, Azadi P, Woods RJ, Glushka JN, Bendiak B, Prestegard JH, West CM | The Journal of biological chemistry | 28928219 | J Biol Chem | 2017 Nov 17 | https://www.ncbi.nlm.nih.gov/pubmed/28928219 |
| The Tetrameric Plant Lectin BanLec Neutralizes HIV through Bidentate Binding to Specific Viral Glycans. | Hopper JTS, Ambrose S, Grant OC, Krumm SA, Allison TM, Degiacomi MT, Tully MD, Pritchard LK, Ozorowski G, Ward AB, Crispin M, Doores KJ, Woods RJ, Benesch JLP, Robinson CV, Struwe WB | Structure (London, England : 1993) | 28434916 | Structure | 2017 May 2 | https://www.ncbi.nlm.nih.gov/pubmed/28434916 |
| Three mutations switch H7N9 influenza to human-type receptor specificity. | de Vries RP, Peng W, Grant OC, Thompson AJ, Zhu X, Bouwman KM, de la Pena ATT, van Breemen MJ, Ambepitiya Wickramasinghe IN, de Haan CAM, Yu W, McBride R, Sanders RW, Woods RJ, Verheije MH, Wilson IA, Paulson JC | PLoS pathogens | 28617868 | PLoS Pathog | 2017 Jun | https://www.ncbi.nlm.nih.gov/pubmed/28617868 |
| Cross-Ring Fragmentation Patterns in the Tandem Mass Spectra of Underivatized Sialylated Oligosaccharides and Their Special Suitability for Spectrum Library Searching. | De Leoz MLA, Simón-Manso Y, Woods RJ, Stein SE | Journal of the American Society for Mass Spectrometry | 30565163 | J Am Soc Mass Spectrom | 2019 Mar | https://www.ncbi.nlm.nih.gov/pubmed/30565163 |
| Analysis of the SARS-CoV-2 spike protein glycan shield reveals implications for immune recognition. | Grant OC, Montgomery D, Ito K, Woods RJ | Scientific reports | 32929138 | Sci Rep | 2020 Sep 14 | https://www.ncbi.nlm.nih.gov/pubmed/32929138 |
| Synthesis and O-Glycosidic Linkage Conformational Analysis of (13)C-Labeled Oligosaccharide Fragments of an Antifreeze Glycolipid. | Zhang W, Meredith R, Yoon MK, Wang X, Woods RJ, Carmichael I, Serianni AS | The Journal of organic chemistry | 30624062 | J Org Chem | 2019 Feb 15 | https://www.ncbi.nlm.nih.gov/pubmed/30624062 |
| Cellular O-Glycome Reporter/Amplification (CORA): Analytical and Preparative Tools to Study Mucin-Type O-Glycans of Living Cells. | Kudelka MR, Li Z, Chernova TA, Smith DF, Song X, Cummings RD, Ju T | Current protocols | 34101390 | Curr Protoc | 2021 Jun | https://www.ncbi.nlm.nih.gov/pubmed/34101390 |
| Synthesis and Characterization of Versatile O-Glycan Precursors for Cellular O-Glycomics. | Zhang Q, Li Z, Chernova T, Saikam V, Cummings R, Song X, Ju T, Smith DF, Wang PG | ACS synthetic biology | 31638776 | ACS Synth Biol | 2019 Nov 15 | https://www.ncbi.nlm.nih.gov/pubmed/31638776 |
| Morphology of Biomaterials Affect O-Glycosylation of HUVECs. | Hu X, Sheng J, Guan G, Ju T, Smith DF, Wang L | Journal of functional biomaterials | 36412876 | J Funct Biomater | 2022 Nov 11 | https://www.ncbi.nlm.nih.gov/pubmed/36412876 |
| Methods Matter: Standard Production Platforms for Recombinant AAV Produce Chemically and Functionally Distinct Vectors. | Rumachik NG, Malaker SA, Poweleit N, Maynard LH, Adams CM, Leib RD, Cirolia G, Thomas D, Stamnes S, Holt K, Sinn P, May AP, Paulk NK | Molecular therapy. Methods & clinical development | 32995354 | Mol Ther Methods Clin Dev | 2020 Sep 11 | https://www.ncbi.nlm.nih.gov/pubmed/32995354 |
| Optimal Dissociation Methods Differ for N- and O-Glycopeptides. | Riley NM, Malaker SA, Driessen MD, Bertozzi CR | Journal of proteome research | 32500713 | J Proteome Res | 2020 Aug 7 | https://www.ncbi.nlm.nih.gov/pubmed/32500713 |
| O-Pair Search with MetaMorpheus for O-glycopeptide characterization. | Lu L, Riley NM, Shortreed MR, Bertozzi CR, Smith LM | Nature methods | 33106676 | Nat Methods | 2020 Nov | https://www.ncbi.nlm.nih.gov/pubmed/33106676 |
| Lineage Plasticity in SCLC Generates Non-Neuroendocrine Cells Primed for Vasculogenic Mimicry. | Pearsall SM, Williamson SC, Humphrey S, Hughes E, Morgan D, García Marqués FJ, Awanis G, Carroll R, Burks L, Shue YT, Bermudez A, Frese KK, Galvin M, Carter M, Priest L, Kerr A, Zhou C, Oliver TG, Humphries JD, Humphries MJ, Blackhall F, Cannell IG, Pitteri SJ, Hannon GJ, Sage J, Dive C, Simpson KL | Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer | 37455012 | J Thorac Oncol | 2023 Oct | https://www.ncbi.nlm.nih.gov/pubmed/37455012 |
| Development of IsoTaG, a Chemical Glycoproteomics Technique for Profiling Intact N- and O-Glycopeptides from Whole Cell Proteomes. | Woo CM, Felix A, Byrd WE, Zuegel DK, Ishihara M, Azadi P, Iavarone AT, Pitteri SJ, Bertozzi CR | Journal of proteome research | 28244757 | J Proteome Res | 2017 Apr 7 | https://www.ncbi.nlm.nih.gov/pubmed/28244757 |
| A Pragmatic Guide to Enrichment Strategies for Mass Spectrometry-Based Glycoproteomics. | Riley NM, Bertozzi CR, Pitteri SJ | Molecular & cellular proteomics : MCP | 33583771 | Mol Cell Proteomics | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/33583771 |
| Mapping and Quantification of Over 2000 O-linked Glycopeptides in Activated Human T Cells with Isotope-Targeted Glycoproteomics (Isotag). | Woo CM, Lund PJ, Huang AC, Davis MM, Bertozzi CR, Pitteri SJ | Molecular & cellular proteomics : MCP | 29351928 | Mol Cell Proteomics | 2018 Apr | https://www.ncbi.nlm.nih.gov/pubmed/29351928 |
| A Novel Germline Variant in CSF3R Reduces N-Glycosylation and Exerts Potent Oncogenic Effects in Leukemia. | Spiciarich DR, Oh ST, Foley A, Hughes SB, Mauro MJ, Abdel-Wahab O, Press RD, Viner R, Thompson SL, Chen Q, Azadi P, Bertozzi CR, Maxson JE | Cancer research | 30348809 | Cancer Res | 2018 Dec 15 | https://www.ncbi.nlm.nih.gov/pubmed/30348809 |
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