Glycoscience
Glycoscience
Program Publications
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The search results on this publication page are automated on a monthly schedule based on acknowledgement of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.
| Title | Author | Journal Name | PubMedID | Journal Abbreviation | Publication Date | PubMedLink |
|---|---|---|---|---|---|---|
| OFox imidates as versatile glycosyl donors for chemical glycosylation. | Nigudkar SS, Wang T, Pistorio SG, Yasomanee JP, Stine KJ, Demchenko AV | Organic & biomolecular chemistry | 27808325 | Org Biomol Chem | 2017 Jan 4 | https://www.ncbi.nlm.nih.gov/pubmed/27808325 |
| Extending the S-benzimidazolyl (SBiz) platform: N-alkylated SBiz glycosyl donors with the universal activation profile. | Hasty SJ, Rath NP, Demchenko AV | Pure and applied chemistry. Chimie pure et appliquee | 29861508 | Pure Appl Chem | 2017 Sep | https://www.ncbi.nlm.nih.gov/pubmed/29861508 |
| Immobilization of glycans on solid surfaces for application in glycomics. | O'Neil CL, Stine KJ, Demchenko AV | Journal of carbohydrate chemistry | 30505067 | J Carbohydr Chem | 2018 | https://www.ncbi.nlm.nih.gov/pubmed/30505067 |
| Chemical Synthesis of Human Milk Oligosaccharides: Lacto-N-hexaose Galβ1→3GlcNAcβ1→3 [Galβ1→4GlcNAcβ1→6] Galβ1→4Glc. | Bandara MD, Stine KJ, Demchenko AV | The Journal of organic chemistry | 31749363 | J Org Chem | 2019 Dec 20 | https://www.ncbi.nlm.nih.gov/pubmed/31749363 |
| Investigation of Glycosyl Nitrates as Building Blocks for Chemical Glycosylation. | Wang T, Singh Y, Stine KJ, Demchenko AV | European journal of organic chemistry | 31341403 | European J Org Chem | 2018 Dec 19 | https://www.ncbi.nlm.nih.gov/pubmed/31341403 |
| Chemical synthesis of human milk oligosaccharides: lacto-N-neohexaose (Galβ1 → 4GlcNAcβ1→)(2) 3,6Galβ1 → 4Glc. | Bandara MD, Stine KJ, Demchenko AV | Organic & biomolecular chemistry | 32048706 | Org Biomol Chem | 2020 Mar 4 | https://www.ncbi.nlm.nih.gov/pubmed/32048706 |
| The development of a dedicated polymer support for the solid-phase oligosaccharide synthesis. | Panza M , Neupane D , Stine KJ , Demchenko AV | Chemical communications (Cambridge, England) | 32785304 | Chem Commun (Camb) | 2020 Sep 16 | https://www.ncbi.nlm.nih.gov/pubmed/32785304 |
| Intramolecular glycosylation. | Jia XG, Demchenko AV | Beilstein journal of organic chemistry | 29062425 | Beilstein J Org Chem | 2017 | https://www.ncbi.nlm.nih.gov/pubmed/29062425 |
| Comparative Study on the Effects of Picoloyl Groups in Sialylations Based on Their Substitution Pattern. | Jones B, Behm A, Shadrick M, Geringer SA, Escopy S, Lohman M, De Meo C | The Journal of organic chemistry | 31718181 | J Org Chem | 2019 Dec 6 | https://www.ncbi.nlm.nih.gov/pubmed/31718181 |
| Regenerative Glycosylation. | Singh Y, Wang T, Geringer SA, Stine KJ, Demchenko AV | The Journal of organic chemistry | 29227649 | J Org Chem | 2018 Jan 5 | https://www.ncbi.nlm.nih.gov/pubmed/29227649 |
| HPLC-Assisted Automated Oligosaccharide Synthesis: Implementation of the Autosampler as a Mode of the Reagent Delivery. | Pistorio SG, Nigudkar SS, Stine KJ, Demchenko AV | The Journal of organic chemistry | 27575052 | J Org Chem | 2016 Oct 7 | https://www.ncbi.nlm.nih.gov/pubmed/27575052 |
| Automated Chemical Oligosaccharide Synthesis: Novel Approach to Traditional Challenges. | Panza M, Pistorio SG, Stine KJ, Demchenko AV | Chemical reviews | 29953217 | Chem Rev | 2018 Sep 12 | https://www.ncbi.nlm.nih.gov/pubmed/29953217 |
| Iron(iii) chloride-catalyzed activation of glycosyl chlorides. | Geringer SA, Demchenko AV | Organic & biomolecular chemistry | 30430182 | Org Biomol Chem | 2018 Dec 5 | https://www.ncbi.nlm.nih.gov/pubmed/30430182 |
| HPLC-assisted automated oligosaccharide synthesis: the implementation of the two-way split valve as a mode of complete automation. | Panza M, Stine KJ, Demchenko AV | Chemical communications (Cambridge, England) | 31930269 | Chem Commun (Camb) | 2020 Jan 28 | https://www.ncbi.nlm.nih.gov/pubmed/31930269 |
| Triflic acid-mediated synthesis of thioglycosides. | Escopy S, Singh Y, Demchenko AV | Organic & biomolecular chemistry | 31490529 | Org Biomol Chem | 2019 Sep 28 | https://www.ncbi.nlm.nih.gov/pubmed/31490529 |
| Synthesis of 2-azido-2-deoxy- and 2-acetamido-2-deoxy-D-manno derivatives as versatile building blocks. | Alex C, Visansirikul S, Zhang Y, Yasomanee JP, Codee J, Demchenko AV | Carbohydrate research | 31901454 | Carbohydr Res | 2020 Feb | https://www.ncbi.nlm.nih.gov/pubmed/31901454 |
| Bromine-Promoted Glycosidation of Conformationally Superarmed Thioglycosides. | Panza M, Civera M, Yasomanee JP, Belvisi L, Demchenko AV | Chemistry (Weinheim an der Bergstrasse, Germany) | 31286579 | Chemistry | 2019 Sep 12 | https://www.ncbi.nlm.nih.gov/pubmed/31286579 |
| Facile and robust methods for the regioselective acylation of N-acetylneuraminic acid. | Shadrick M, Yu C, Geringer S, Ritter S, Behm A, Cox A, Lohman M, De Meo C | New journal of chemistry = Nouveau journal de chimie | 30147293 | New J Chem | 2018 Sep 7 | https://www.ncbi.nlm.nih.gov/pubmed/30147293 |
| Glycosyl nitrates in synthesis: streamlined access to glucopyranose building blocks differentiated at C-2. | Wang T, Nigudkar SS, Yasomanee JP, Rath NP, Stine KJ, Demchenko AV | Organic & biomolecular chemistry | 29693690 | Org Biomol Chem | 2018 May 15 | https://www.ncbi.nlm.nih.gov/pubmed/29693690 |
| Application of Porous Materials to Carbohydrate Chemistry and Glycoscience. | Stine KJ | Advances in carbohydrate chemistry and biochemistry | 29173727 | Adv Carbohydr Chem Biochem | 2017 | https://www.ncbi.nlm.nih.gov/pubmed/29173727 |
| Investigation of the H-bond-mediated aglycone delivery reaction in application to the synthesis of β-glucosides. | Mannino MP, Yasomanee JP, Demchenko AV | Carbohydrate research | 30286335 | Carbohydr Res | 2018 Dec | https://www.ncbi.nlm.nih.gov/pubmed/30286335 |
| Synthesis of carbohydrate building blocks via regioselective uniform protection/deprotection strategies. | Wang T, Demchenko AV | Organic & biomolecular chemistry | 31044205 | Org Biomol Chem | 2019 May 28 | https://www.ncbi.nlm.nih.gov/pubmed/31044205 |
| Manual and Automated Syntheses of the N-Linked Glycoprotein Core Glycans. | Pistorio SG, Geringer SA, Stine KJ, Demchenko AV | The Journal of organic chemistry | 31066275 | J Org Chem | 2019 Jun 7 | https://www.ncbi.nlm.nih.gov/pubmed/31066275 |
| The chemical synthesis of human milk oligosaccharides: Lacto-N-neotetraose (Galβ1→4GlcNAcβ1→3Galβ1→4Glc). | Bandara MD, Stine KJ, Demchenko AV | Carbohydrate research | 31319351 | Carbohydr Res | 2019 Sep 1 | https://www.ncbi.nlm.nih.gov/pubmed/31319351 |
| Koenigs-Knorr Glycosylation Reaction Catalyzed by Trimethylsilyl Trifluoromethanesulfonate. | Singh Y, Demchenko AV | Chemistry (Weinheim an der Bergstrasse, Germany) | 30407673 | Chemistry | 2019 Jan 28 | https://www.ncbi.nlm.nih.gov/pubmed/30407673 |
| A pH sensitive thiolated β-cyclodextrin-modified nanoporous gold for controlled release of doxorubicin. | Neupane D, Bhattarai JK, Demchenko AV, Stine KJ | Journal of drug delivery science and technology | 32922527 | J Drug Deliv Sci Technol | 2020 Dec | https://www.ncbi.nlm.nih.gov/pubmed/32922527 |
| A Streamlined Regenerative Glycosylation Reaction: Direct, Acid-Free Activation of Thioglycosides. | Escopy S, Singh Y, Stine KJ, Demchenko AV | Chemistry (Weinheim an der Bergstrasse, Germany) | 32804435 | Chemistry | 2021 Jan 4 | https://www.ncbi.nlm.nih.gov/pubmed/32804435 |
| The chemical synthesis of human milk oligosaccharides: Lacto-N-tetraose (Galβ1→3GlcNAcβ1→3Galβ1→4Glc). | Bandara MD, Stine KJ, Demchenko AV | Carbohydrate research | 31585319 | Carbohydr Res | 2019 Dec 1 | https://www.ncbi.nlm.nih.gov/pubmed/31585319 |
| HPLC-Based Automated Synthesis and Purification of Carbohydrates. | Kashiwagi GA, Petrosilli L, Escopy S, Lay L, Stine KJ, De Meo C, Demchenko AV | Chemistry (Weinheim an der Bergstrasse, Germany) | 38684455 | Chemistry | 2024 Aug 1 | https://www.ncbi.nlm.nih.gov/pubmed/38684455 |
| Chemoenzymatic synthesis of Neu5Ac9NAc-containing α2-3- and α2-6-linked sialosides and their use for sialidase substrate specificity studies. | Li W, Xiao A, Li Y, Yu H, Chen X | Carbohydrate research | 28961426 | Carbohydr Res | 2017 Nov 8 | https://www.ncbi.nlm.nih.gov/pubmed/28961426 |
| Biochemical characterization of Helicobacter pylori α1-3-fucosyltransferase and its application in the synthesis of fucosylated human milk oligosaccharides. | Bai J, Wu Z, Sugiarto G, Gadi MR, Yu H, Li Y, Xiao C, Ngo A, Zhao B, Chen X, Guan W | Carbohydrate research | 31132553 | Carbohydr Res | 2019 Jul 1 | https://www.ncbi.nlm.nih.gov/pubmed/31132553 |
| Catalytic Cycle of Neisseria meningitidis CMP-Sialic Acid Synthetase Illustrated by High-Resolution Protein Crystallography. | Matthews MM, McArthur JB, Li Y, Yu H, Chen X, Fisher AJ | Biochemistry | 31583886 | Biochemistry | 2020 Sep 1 | https://www.ncbi.nlm.nih.gov/pubmed/31583886 |
| Synthesis of N-Glycolylneuraminic Acid (Neu5Gc) and Its Glycosides. | Kooner AS, Yu H, Chen X | Frontiers in immunology | 31555264 | Front Immunol | 2019 | https://www.ncbi.nlm.nih.gov/pubmed/31555264 |
| Facile chemoenzymatic synthesis of Lewis a (Le(a)) antigen in gram-scale and sialyl Lewis a (sLe(a)) antigens containing diverse sialic acid forms. | Tasnima N, Yu H, Yan X, Li W, Xiao A, Chen X | Carbohydrate research | 30562693 | Carbohydr Res | 2019 Jan 15 | https://www.ncbi.nlm.nih.gov/pubmed/30562693 |
| Streamlined chemoenzymatic total synthesis of prioritized ganglioside cancer antigens. | Yu H, Santra A, Li Y, McArthur JB, Ghosh T, Yang X, Wang PG, Chen X | Organic & biomolecular chemistry | 29789847 | Org Biomol Chem | 2018 Jun 6 | https://www.ncbi.nlm.nih.gov/pubmed/29789847 |
| Sialidase-catalyzed one-pot multienzyme (OPME) synthesis of sialidase transition-state analogue inhibitors. | Xiao A, Li Y, Li X, Santra A, Yu H, Li W, Chen X | ACS catalysis | 29713561 | ACS Catal | 2018 Jan 5 | https://www.ncbi.nlm.nih.gov/pubmed/29713561 |
| Regioselective One-Pot Multienzyme (OPME) Chemoenzymatic Strategies for Systematic Synthesis of Sialyl Core 2 Glycans. | Santra A, Li Y, Ghosh T, Li R, Yu H, Chen X | ACS catalysis | 31304048 | ACS Catal | 2019 Jan 4 | https://www.ncbi.nlm.nih.gov/pubmed/31304048 |
| One-pot multienzyme (OPME) chemoenzymatic synthesis of brain ganglioside glycans with human ST3GAL II expressed in E. coli. | Yang X, Yu H, Yang X, Kooner AS, Yuan Y, Luu B, Chen X | ChemCatChem | 35784007 | ChemCatChem | 2022 Jan 21 | https://www.ncbi.nlm.nih.gov/pubmed/35784007 |
| Recent progress in synthesis of carbohydrates with sugar nucleotide-dependent glycosyltransferases. | Na L, Li R, Chen X | Current opinion in chemical biology | 33310623 | Curr Opin Chem Biol | 2021 Apr | https://www.ncbi.nlm.nih.gov/pubmed/33310623 |
| Advancing Chemoenzymatic Synthesis and Covalent Immobilization of a Comprehensive Ganglio-glycosphingolipid Library Enables Functional Multiplex Bead Assays. | Gucchait A, Fu J, Zhang L, Agrahari AK, Zheng Z, Yang X, Yu H, Yang X, Varki A, Chen X | Journal of the American Chemical Society | 41017468 | J Am Chem Soc | 2025 Oct 8 | https://www.ncbi.nlm.nih.gov/pubmed/41017468 |
| H. pylori α1-3/4-fucosyltransferase (Hp3/4FT)-catalyzed one-pot multienzyme (OPME) synthesis of Lewis antigens and human milk fucosides. | Yu H, Li Y, Wu Z, Li L, Zeng J, Zhao C, Wu Y, Tasnima N, Wang J, Liu H, Gadi MR, Guan W, Wang PG, Chen X | Chemical communications (Cambridge, England) | 28936496 | Chem Commun (Camb) | 2017 Oct 5 | https://www.ncbi.nlm.nih.gov/pubmed/28936496 |
| Recent progress in chemical synthesis of bacterial surface glycans. | Li R, Yu H, Chen X | Current opinion in chemical biology | 32920523 | Curr Opin Chem Biol | 2020 Oct | https://www.ncbi.nlm.nih.gov/pubmed/32920523 |
| Directed Evolution of Therapeutic Antibodies Targeting Glycosylation in Cancer. | Amon R, Rosenfeld R, Perlmutter S, Grant OC, Yehuda S, Borenstein-Katz A, Alcalay R, Marshanski T, Yu H, Diskin R, Woods RJ, Chen X, Padler-Karavani V | Cancers | 33007970 | Cancers (Basel) | 2020 Sep 30 | https://www.ncbi.nlm.nih.gov/pubmed/33007970 |
| Substrate and Process Engineering for Biocatalytic Synthesis and Facile Purification of Human Milk Oligosaccharides. | Bai Y, Yang X, Yu H, Chen X | ChemSusChem | 35100486 | ChemSusChem | 2022 May 6 | https://www.ncbi.nlm.nih.gov/pubmed/35100486 |
| Chemoenzymatic Synthesis and Facile Purification of Gangliosides. | Bai Y, Yu H, Chen X | Current protocols | 33760402 | Curr Protoc | 2021 Mar | https://www.ncbi.nlm.nih.gov/pubmed/33760402 |
| Process Engineering and Glycosyltransferase Improvement for Short Route Chemoenzymatic Total Synthesis of GM1 Gangliosides. | Yu H, Zhang L, Yang X, Bai Y, Chen X | Chemistry (Weinheim an der Bergstrasse, Germany) | 36596720 | Chemistry | 2023 May 2 | https://www.ncbi.nlm.nih.gov/pubmed/36596720 |
| Chemoenzymatic synthesis of para-nitrophenol (pNP)-tagged α2-8-sialosides and high-throughput substrate specificity studies of α2-8-sialidases. | Tasnima N, Yu H, Li Y, Santra A, Chen X | Organic & biomolecular chemistry | 27924345 | Org Biomol Chem | 2016 Dec 20 | https://www.ncbi.nlm.nih.gov/pubmed/27924345 |
| Highly efficient chemoenzymatic synthesis and facile purification of α-Gal pentasaccharyl ceramide Galα3nLc(4)βCer. | Santra A, Li Y, Yu H, Slack TJ, Wang PG, Chen X | Chemical communications (Cambridge, England) | 28695219 | Chem Commun (Camb) | 2017 Jul 20 | https://www.ncbi.nlm.nih.gov/pubmed/28695219 |
| Converting Pasteurella multocidaα2-3-sialyltransferase 1 (PmST1) to a regioselective α2-6-sialyltransferase by saturation mutagenesis and regioselective screening. | McArthur JB, Yu H, Zeng J, Chen X | Organic & biomolecular chemistry | 28134951 | Org Biomol Chem | 2017 Feb 21 | https://www.ncbi.nlm.nih.gov/pubmed/28134951 |
| Strategies for chemoenzymatic synthesis of carbohydrates. | Li W, McArthur JB, Chen X | Carbohydrate research | 30529493 | Carbohydr Res | 2019 Jan 15 | https://www.ncbi.nlm.nih.gov/pubmed/30529493 |
| A Bacterial β1-3-Galactosyltransferase Enables Multigram-Scale Synthesis of Human Milk Lacto-N-tetraose (LNT) and Its Fucosides. | McArthur JB, Yu H, Chen X | ACS catalysis | 33408950 | ACS Catal | 2019 Dec 6 | https://www.ncbi.nlm.nih.gov/pubmed/33408950 |
| Chemoenzymatic Total Synthesis of GM3 Gangliosides Containing Different Sialic Acid Forms and Various Fatty Acyl Chains. | Yu H, Gadi MR, Bai Y, Zhang L, Li L, Yin J, Wang PG, Chen X | The Journal of organic chemistry | 34152144 | J Org Chem | 2021 Jul 2 | https://www.ncbi.nlm.nih.gov/pubmed/34152144 |
| Chemoenzymatic Synthesis of N-Acetyl Analogues of 9-O-Acetylated b-Series Gangliosides. | Yu H, Zheng Z, Zhang L, Yang X, Varki A, Chen X | Tetrahedron | 37981995 | Tetrahedron | 2023 Aug 3 | https://www.ncbi.nlm.nih.gov/pubmed/37981995 |
| Challenges in the Conversion of Manual Processes to Machine-Assisted Syntheses: Activation of Thioglycoside Donors with Aryl(trifluoroethyl)iodonium Triflimide. | Saliba RC, Wooke ZJ, Nieves GA, Chu AA, Bennett CS, Pohl NLB | Organic letters | 29336575 | Org Lett | 2018 Feb 2 | https://www.ncbi.nlm.nih.gov/pubmed/29336575 |
| Modular continuous flow synthesis of orthogonally protected 6-deoxy glucose glycals. | Yalamanchili S, Nguyen TV, Pohl NLB, Bennett CS | Organic & biomolecular chemistry | 32293636 | Org Biomol Chem | 2020 May 6 | https://www.ncbi.nlm.nih.gov/pubmed/32293636 |
| Matching Glycosyl Donor Reactivity to Sulfonate Leaving Group Ability Permits S(N)2 Glycosylations. | Zhuo MH, Wilbur DJ, Kwan EE, Bennett CS | Journal of the American Chemical Society | 31550879 | J Am Chem Soc | 2019 Oct 23 | https://www.ncbi.nlm.nih.gov/pubmed/31550879 |
| Rapid de Novo Preparation of 2,6-Dideoxy Sugar Libraries through Gold-Catalyzed Homopropargyl Orthoester Cyclization. | Yalamanchili S, Miller W, Chen X, Bennett CS | Organic letters | 31755271 | Org Lett | 2019 Dec 6 | https://www.ncbi.nlm.nih.gov/pubmed/31755271 |
| Automated, Multistep Continuous-Flow Synthesis of 2,6-Dideoxy and 3-Amino-2,3,6-trideoxy Monosaccharide Building Blocks. | Yalamanchili S, Nguyen TA, Zsikla A, Stamper G, DeYong AE, Florek J, Vasquez O, Pohl NLB, Bennett CS | Angewandte Chemie (International ed. in English) | 34463017 | Angew Chem Int Ed Engl | 2021 Oct 18 | https://www.ncbi.nlm.nih.gov/pubmed/34463017 |
| Recent Developments in Stereoselective Chemical Glycosylation. | Ling J, Bennett CS | Asian journal of organic chemistry | 31534883 | Asian J Org Chem | 2019 Jun | https://www.ncbi.nlm.nih.gov/pubmed/31534883 |
| Reagent Controlled Direct Dehydrative Glycosylation with 2-Deoxy Sugars: Construction of the Saquayamycin Z Pentasaccharide. | Mizia JC, Bennett CS | Organic letters | 31305082 | Org Lett | 2019 Aug 2 | https://www.ncbi.nlm.nih.gov/pubmed/31305082 |
| Synthesis of the Hexasaccharide Fragment of Landomycin A Using a Mild, Reagent-Controlled Approach. | Yalamanchili S, Lloyd D, Bennett CS | Organic letters | 31021647 | Org Lett | 2019 May 17 | https://www.ncbi.nlm.nih.gov/pubmed/31021647 |
| An Improved Approach to the Direct Construction of 2-Deoxy-β-Linked Sugars: Applications to Oligosaccharide Synthesis. | Lloyd D, Bennett CS | Chemistry (Weinheim an der Bergstrasse, Germany) | 29572995 | Chemistry | 2018 May 28 | https://www.ncbi.nlm.nih.gov/pubmed/29572995 |
| Methods for 2-Deoxyglycoside Synthesis. | Bennett CS, Galan MC | Chemical reviews | 29953219 | Chem Rev | 2018 Sep 12 | https://www.ncbi.nlm.nih.gov/pubmed/29953219 |
| Reagent-Controlled α-Selective Dehydrative Glycosylation of 2,6-Dideoxy Sugars: Construction of the Arugomycin Tetrasaccharide. | Romeo JR, McDermott L, Bennett CS | Organic letters | 32281384 | Org Lett | 2020 May 1 | https://www.ncbi.nlm.nih.gov/pubmed/32281384 |
| Glycosyl Sulfonates Beyond Triflates. | Bennett CS | Chemical record (New York, N.Y.) | 34142755 | Chem Rec | 2021 Nov | https://www.ncbi.nlm.nih.gov/pubmed/34142755 |
| Versatile Glycosyl Sulfonates in β-Selective C-Glycosylation. | Ling J, Bennett CS | Angewandte Chemie (International ed. in English) | 31880395 | Angew Chem Int Ed Engl | 2020 Mar 9 | https://www.ncbi.nlm.nih.gov/pubmed/31880395 |
| Expanding Glycomic Investigations through Thiol-Derivatized Glycans. | Hurst RD, Nieves A, Brichacek M | Molecules (Basel, Switzerland) | 36838944 | Molecules | 2023 Feb 18 | https://www.ncbi.nlm.nih.gov/pubmed/36838944 |
| Transformation of aldehydes into nitriles in an aqueous medium using O-phenylhydroxylamine as the nitrogen source. | Cheewawisuttichai T, Hurst RD, Brichacek M | Carbohydrate research | 33761407 | Carbohydr Res | 2021 Apr | https://www.ncbi.nlm.nih.gov/pubmed/33761407 |
| Development of a multifunctional neoglycoside auxiliary for applications in glycomics research. | Cheewawisuttichai T, Brichacek M | Organic & biomolecular chemistry | 34264248 | Org Biomol Chem | 2021 Aug 5 | https://www.ncbi.nlm.nih.gov/pubmed/34264248 |
| Improved isolation and characterization procedure of sialylglycopeptide from egg yolk powder. | Liu L, Prudden AR, Bosman GP, Boons GJ | Carbohydrate research | 29096185 | Carbohydr Res | 2017 Nov 27 | https://www.ncbi.nlm.nih.gov/pubmed/29096185 |
| Chemoenzymatic Tagging of Tn/TF/STF Antigens in Living Systems. | Yang Y, Chen M, Wu M, Hong S, Gao B, Liu Y, Yu C, Young TS, Chapla DG, Yang JY, Cappiello JR, Li JP, Sharpless KB, Moremen KW, Wu P | Israel journal of chemistry | 38737670 | Isr J Chem | 2023 Oct | https://www.ncbi.nlm.nih.gov/pubmed/38737670 |
| Cell surface glycan engineering reveals that matriglycan alone can recapitulate dystroglycan binding and function. | Sheikh MO, Capicciotti CJ, Liu L, Praissman J, Ding D, Mead DG, Brindley MA, Willer T, Campbell KP, Moremen KW, Wells L, Boons GJ | Nature communications | 35750689 | Nat Commun | 2022 Jun 24 | https://www.ncbi.nlm.nih.gov/pubmed/35750689 |
| Guillain-Barré syndrome: expanding the concept of molecular mimicry. | Laman JD, Huizinga R, Boons GJ, Jacobs BC | Trends in immunology | 35256276 | Trends Immunol | 2022 Apr | https://www.ncbi.nlm.nih.gov/pubmed/35256276 |
| Chemoenzymatic Synthesis of Campylobacter jejuni Lipo-oligosaccharide Core Domains to Examine Guillain-Barré Syndrome Serum Antibody Specificities. | Li T, Wolfert MA, Wei N, Huizinga R, Jacobs BC, Boons GJ | Journal of the American Chemical Society | 33164488 | J Am Chem Soc | 2020 Nov 18 | https://www.ncbi.nlm.nih.gov/pubmed/33164488 |
| Streamlining the chemoenzymatic synthesis of complex N-glycans by a stop and go strategy. | Liu L, Prudden AR, Capicciotti CJ, Bosman GP, Yang JY, Chapla DG, Moremen KW, Boons GJ | Nature chemistry | 30532014 | Nat Chem | 2019 Feb | https://www.ncbi.nlm.nih.gov/pubmed/30532014 |
| Chemoenzymatic Synthesis of Asymmetrical Multi-Antennary N-Glycans to Dissect Glycan-Mediated Interactions between Human Sperm and Oocytes. | Chinoy ZS, Friscourt F, Capicciotti CJ, Chiu P, Boons GJ | Chemistry (Weinheim an der Bergstrasse, Germany) | 29603480 | Chemistry | 2018 Jun 4 | https://www.ncbi.nlm.nih.gov/pubmed/29603480 |
| Glycan remodeled erythrocytes facilitate antigenic characterization of recent A/H3N2 influenza viruses. | Broszeit F, van Beek RJ, Unione L, Bestebroer TM, Chapla D, Yang JY, Moremen KW, Herfst S, Fouchier RAM, de Vries RP, Boons GJ | Nature communications | 34521834 | Nat Commun | 2021 Sep 14 | https://www.ncbi.nlm.nih.gov/pubmed/34521834 |
| An automated platform for the enzyme-mediated assembly of complex oligosaccharides. | Li T, Liu L, Wei N, Yang JY, Chapla DG, Moremen KW, Boons GJ | Nature chemistry | 30792508 | Nat Chem | 2019 Mar | https://www.ncbi.nlm.nih.gov/pubmed/30792508 |
| Appropriate aglycone modification significantly expands the glycan substrate acceptability of α1,6-fucosyltransferase (FUT8). | Zhang R, Yang Q, Boruah BM, Zong G, Li C, Chapla D, Yang JY, Moremen KW, Wang LX | The Biochemical journal | 33734311 | Biochem J | 2021 Apr 30 | https://www.ncbi.nlm.nih.gov/pubmed/33734311 |
| Emerging structural insights into glycosyltransferase-mediated synthesis of glycans. | Moremen KW, Haltiwanger RS | Nature chemical biology | 31427814 | Nat Chem Biol | 2019 Sep | https://www.ncbi.nlm.nih.gov/pubmed/31427814 |
| Diastereoselective sp(3) C-O Bond Formation via Visible Light-Induced, Copper-Catalyzed Cross-Couplings of Glycosyl Bromides with Aliphatic Alcohols. | Yu F, Dickson JL, Loka RS, Xu H, Schaugaard RN, Schlegel HB, Luo L, Nguyen HM | ACS catalysis | 34168901 | ACS Catal | 2020 Jun 5 | https://www.ncbi.nlm.nih.gov/pubmed/34168901 |
| Enantio- and Diastereoselective Synthesis of Hydroxy Bis(boronates) via Cu-Catalyzed Tandem Borylation/1,2-Addition. | Green JC, Joannou MV, Murray SA, Zanghi JM, Meek SJ | ACS catalysis | 29520326 | ACS Catal | 2017 | https://www.ncbi.nlm.nih.gov/pubmed/29520326 |
| Phenanthroline-Catalyzed Stereoretentive Glycosylations. | Yu F, Li J, DeMent PM, Tu YJ, Schlegel HB, Nguyen HM | Angewandte Chemie (International ed. in English) | 30920099 | Angew Chem Int Ed Engl | 2019 May 20 | https://www.ncbi.nlm.nih.gov/pubmed/30920099 |
| Phenanthroline-Catalyzed Stereoselective Formation of α-1,2-cis 2-Deoxy-2-Fluoro Glycosides. | DeMent PM, Liu C, Wakpal J, Schaugaard RN, Schlegel HB, Nguyen HM | ACS catalysis | 34336371 | ACS Catal | 2021 Feb 19 | https://www.ncbi.nlm.nih.gov/pubmed/34336371 |
| Biochemical characterization of an α1,2-colitosyltransferase from Escherichia coli O55:H7. | Wu Z, Zhao G, Li T, Qu J, Guan W, Wang J, Ma C, Li X, Zhao W, Wang PG, Li L | Glycobiology | 26703456 | Glycobiology | 2016 May | https://www.ncbi.nlm.nih.gov/pubmed/26703456 |
| An OGA-Resistant Probe Allows Specific Visualization and Accurate Identification of O-GlcNAc-Modified Proteins in Cells. | Li J, Wang J, Wen L, Zhu H, Li S, Huang K, Jiang K, Li X, Ma C, Qu J, Parameswaran A, Song J, Zhao W, Wang PG | ACS chemical biology | 27622469 | ACS Chem Biol | 2016 Nov 18 | https://www.ncbi.nlm.nih.gov/pubmed/27622469 |
| Chemoenzymatic Synthesis of a Library of Human Milk Oligosaccharides. | Xiao Z, Guo Y, Liu Y, Li L, Zhang Q, Wen L, Wang X, Kondengaden SM, Wu Z, Zhou J, Cao X, Li X, Ma C, Wang PG | The Journal of organic chemistry | 27305319 | J Org Chem | 2016 Jul 15 | https://www.ncbi.nlm.nih.gov/pubmed/27305319 |
| Sialic acid linkage-specific permethylation for improved profiling of protein glycosylation by MALDI-TOF MS. | Jiang K, Zhu H, Li L, Guo Y, Gashash E, Ma C, Sun X, Li J, Zhang L, Wang PG | Analytica chimica acta | 28693729 | Anal Chim Acta | 2017 Aug 15 | https://www.ncbi.nlm.nih.gov/pubmed/28693729 |
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| Lectin-Seq: A method to profile lectin-microbe interactions in native communities. | McPherson RL, Isabella CR, Walker RL, Sergio D, Bae S, Gaca T, Raman S, Nguyen LTT, Wesener DA, Halim M, Wuo MG, Dugan A, Kerby R, Ghosh S, Rey FE, Dhennezel C, Pishchany G, Lensch V, Vlamakis H, Alm EJ, Xavier RJ, Kiessling LL | Science advances | 37506208 | Sci Adv | 2023 Jul 28 | https://www.ncbi.nlm.nih.gov/pubmed/37506208 |
| Advances in glycoscience to understand viral infection and colonization. | Dugan AE, Peiffer AL, Kiessling LL | Nature methods | 35396476 | Nat Methods | 2022 Apr | https://www.ncbi.nlm.nih.gov/pubmed/35396476 |
| Intelectin-2 is a broad-spectrum antimicrobial lectin. | Dugan AE, Syangtan D, Nonnecke EB, Chorghade RS, Peiffer AL, Yao JJ, Ille-Bunn J, Sergio D, Pishchany G, Dhennezel C, Vlamakis H, Bae S, Johnson S, Ellis C, Ghosh S, Alty JW, Barnes CE, Krupkin M, Cárcamo-Oyarce G, Ribbeck K, Xavier RJ, Bevins CL, Kiessling LL | bioRxiv : the preprint server for biology | 40661551 | bioRxiv | 2025 Jun 10 | https://www.ncbi.nlm.nih.gov/pubmed/40661551 |
| A phase II trial of mitomycin, vincristine, bleomycin, and cisplatin (MOBP) as neoadjuvant therapy in high-risk cervical carcinoma. | Weiner SA, Aristizabal S, Alberts DS, Surwit EA, Deatherage-Deuser K | Gynecologic oncology | 2452769 | Gynecol Oncol | 1988 May | https://www.ncbi.nlm.nih.gov/pubmed/2452769 |
| Investigation of electrospray for a capillary electrophoresis-mass spectrometry interface in reverse polarity and negative ion mode. | Stickney M, Xia Q, Amster IJ | European journal of mass spectrometry (Chichester, England) | 30773923 | Eur J Mass Spectrom (Chichester) | 2019 Feb | https://www.ncbi.nlm.nih.gov/pubmed/30773923 |
| Heavy Heparin: A Stable Isotope-Enriched, Chemoenzymatically-Synthesized, Poly-Component Drug. | Cress BF, Bhaskar U, Vaidyanathan D, Williams A, Cai C, Liu X, Fu L, M-Chari V, Zhang F, Mousa SA, Dordick JS, Koffas MAG, Linhardt RJ | Angewandte Chemie (International ed. in English) | 30870573 | Angew Chem Int Ed Engl | 2019 Apr 23 | https://www.ncbi.nlm.nih.gov/pubmed/30870573 |
| Glycosaminoglycans compositional analysis of Urodele axolotl (Ambystoma mexicanum) and Porcine Retina. | Kim SY, Kundu J, Williams A, Yandulskaya AS, Monaghan JR, Carrier RL, Linhardt RJ | Glycoconjugate journal | 30963354 | Glycoconj J | 2019 Apr | https://www.ncbi.nlm.nih.gov/pubmed/30963354 |
| Circulating heparin oligosaccharides rapidly target the hippocampus in sepsis, potentially impacting cognitive functions. | Zhang X, Han X, Xia K, Xu Y, Yang Y, Oshima K, Haeger SM, Perez MJ, McMurtry SA, Hippensteel JA, Ford JA, Herson PS, Liu J, Schmidt EP, Linhardt RJ | Proceedings of the National Academy of Sciences of the United States of America | 31010931 | Proc Natl Acad Sci U S A | 2019 May 7 | https://www.ncbi.nlm.nih.gov/pubmed/31010931 |
| Comparison of the Interactions of Different Growth Factors and Glycosaminoglycans. | Zhang F, Zheng L, Cheng S, Peng Y, Fu L, Zhang X, Linhardt RJ | Molecules (Basel, Switzerland) | 31527407 | Molecules | 2019 Sep 16 | https://www.ncbi.nlm.nih.gov/pubmed/31527407 |
| 1D and 2D-HSQC NMR: Two Methods to Distinguish and Characterize Heparin From Different Animal and Tissue Sources. | Mauri L, Marinozzi M, Phatak N, Karfunkle M, St Ange K, Guerrini M, Keire DA, Linhardt RJ | Frontiers in medicine | 31316989 | Front Med (Lausanne) | 2019 | https://www.ncbi.nlm.nih.gov/pubmed/31316989 |
| Elucidating the unusual reaction kinetics of D-glucuronyl C5-epimerase. | Vaidyanathan D, Paskaleva E, Vargason T, Ke X, McCallum SA, Linhardt RJ, Dordick JS | Glycobiology | 32304324 | Glycobiology | 2020 Oct 21 | https://www.ncbi.nlm.nih.gov/pubmed/32304324 |
| Developments in Mass Spectrometry for Glycosaminoglycan Analysis: A Review. | Pepi LE, Sanderson P, Stickney M, Amster IJ | Molecular & cellular proteomics : MCP | 32938749 | Mol Cell Proteomics | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/32938749 |
| Advances in the preparation and synthesis of heparin and related products. | Baytas SN, Linhardt RJ | Drug discovery today | 32947045 | Drug Discov Today | 2020 Dec | https://www.ncbi.nlm.nih.gov/pubmed/32947045 |
| Investigation of the Experimental Parameters of Ultraviolet Photodissociation for the Structural Characterization of Chondroitin Sulfate Glycosaminoglycan Isomers. | Pepi LE, Leach FE 3rd, Klein DR, Brodbelt JS, Amster IJ | Journal of the American Society for Mass Spectrometry | 34096288 | J Am Soc Mass Spectrom | 2021 Jul 7 | https://www.ncbi.nlm.nih.gov/pubmed/34096288 |
| Increased CHST15 follows decline in arylsulfatase B (ARSB) and disinhibition of non-canonical WNT signaling: potential impact on epithelial and mesenchymal identity. | Bhattacharyya S, Feferman L, Han X, Xia K, Zhang F, Linhardt RJ, Tobacman JK | Oncotarget | 32595831 | Oncotarget | 2020 Jun 16 | https://www.ncbi.nlm.nih.gov/pubmed/32595831 |
| Expression of enzymes for 3'-phosphoadenosine-5'-phosphosulfate (PAPS) biosynthesis and their preparation for PAPS synthesis and regeneration. | Datta P, Fu L, He W, Koffas MAG, Dordick JS, Linhardt RJ | Applied microbiology and biotechnology | 32601738 | Appl Microbiol Biotechnol | 2020 Aug | https://www.ncbi.nlm.nih.gov/pubmed/32601738 |
| Analysis of the Glycosaminoglycan Chains of Proteoglycans. | Song Y, Zhang F, Linhardt RJ | The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society | 32623943 | J Histochem Cytochem | 2021 Feb | https://www.ncbi.nlm.nih.gov/pubmed/32623943 |
| Online Capillary Zone Electrophoresis Negative Electron Transfer Dissociation Tandem Mass Spectrometry of Glycosaminoglycan Mixtures. | Stickney M, Sanderson P, Leach FE 3rd, Zhang F, Linhardt RJ, Amster IJ | International journal of mass spectrometry | 32641905 | Int J Mass Spectrom | 2019 Nov | https://www.ncbi.nlm.nih.gov/pubmed/32641905 |
| Synthesis of selected unnatural sugar nucleotides for biotechnological applications. | Qiao M, Li B, Ji Y, Lin L, Linhardt R, Zhang X | Critical reviews in biotechnology | 33153306 | Crit Rev Biotechnol | 2021 Feb | https://www.ncbi.nlm.nih.gov/pubmed/33153306 |
| Heparosan Chain Characterization: Sequential Depolymerization of E. Coli K5 Heparosan by a Bacterial Eliminase Heparin Lyase III and a Bacterial Hydrolase Heparanase Bp to Prepare Defined Oligomers. | Datta P, Yan L, Awofiranye A, Dordick JS, Linhardt RJ | Biotechnology journal | 33006278 | Biotechnol J | 2021 Mar | https://www.ncbi.nlm.nih.gov/pubmed/33006278 |
| Glycosaminoglycan Compositional Analysis of Relevant Tissues in Zika Virus Pathogenesis and in Vitro Evaluation of Heparin as an Antiviral against Zika Virus Infection. | Kim SY, Koetzner CA, Payne AF, Nierode GJ, Yu Y, Wang R, Barr E, Dordick JS, Kramer LD, Zhang F, Linhardt RJ | Biochemistry | 30698412 | Biochemistry | 2019 Feb 26 | https://www.ncbi.nlm.nih.gov/pubmed/30698412 |
| High-throughput method for in process monitoring of 3-O-sulfotransferase catalyzed sulfonation in bioengineered heparin synthesis. | Lin L, Yu Y, Zhang F, Zhang X, Linhardt RJ | Analytical biochemistry | 31518551 | Anal Biochem | 2019 Dec 1 | https://www.ncbi.nlm.nih.gov/pubmed/31518551 |
| Bottom-up and top-down profiling of pentosan polysulfate. | Lin L , Yu Y , Zhang F , Xia K , Zhang X , Linhardt RJ | The Analyst | 31287456 | Analyst | 2019 Aug 5 | https://www.ncbi.nlm.nih.gov/pubmed/31287456 |
| Functional role of glycosaminoglycans in decellularized lung extracellular matrix. | Uhl FE, Zhang F, Pouliot RA, Uriarte JJ, Rolandsson Enes S, Han X, Ouyang Y, Xia K, Westergren-Thorsson G, Malmström A, Hallgren O, Linhardt RJ, Weiss DJ | Acta biomaterialia | 31751810 | Acta Biomater | 2020 Jan 15 | https://www.ncbi.nlm.nih.gov/pubmed/31751810 |
| Interactions between Sclerostin and Glycosaminoglycans. | Zhang F, Zhao J, Liu X, Linhardt RJ | Glycoconjugate journal | 31828567 | Glycoconj J | 2020 Feb | https://www.ncbi.nlm.nih.gov/pubmed/31828567 |
| Unique Cell Surface Mannan of Yeast Pathogen Candida auris with Selective Binding to IgG. | Yan L, Xia K, Yu Y, Miliakos A, Chaturvedi S, Zhang F, Chen S, Chaturvedi V, Linhardt RJ | ACS infectious diseases | 32233507 | ACS Infect Dis | 2020 May 8 | https://www.ncbi.nlm.nih.gov/pubmed/32233507 |
| High density fermentation of probiotic E. coli Nissle 1917 towards heparosan production, characterization, and modification. | Datta P, Fu L, Brodfuerer P, Dordick JS, Linhardt RJ | Applied microbiology and biotechnology | 33481068 | Appl Microbiol Biotechnol | 2021 Feb | https://www.ncbi.nlm.nih.gov/pubmed/33481068 |
| Electron-Activated Tandem Mass Spectrometry Analysis of Glycosaminoglycans. | Pepi LE, Amster IJ | Current protocols | 33798269 | Curr Protoc | 2021 Apr | https://www.ncbi.nlm.nih.gov/pubmed/33798269 |
| Synthetic heparan sulfate standards and machine learning facilitate the development of solid-state nanopore analysis. | Xia K, Hagan JT, Fu L, Sheetz BS, Bhattacharya S, Zhang F, Dwyer JR, Linhardt RJ | Proceedings of the National Academy of Sciences of the United States of America | 33688052 | Proc Natl Acad Sci U S A | 2021 Mar 16 | https://www.ncbi.nlm.nih.gov/pubmed/33688052 |
| Red Algal Sulfated Galactan Binds and Protects Neural Cells from HIV-1 gp120 and Tat. | Pomin VH, Mahdi F, Jin W, Zhang F, Linhardt RJ, Paris JJ | Pharmaceuticals (Basel, Switzerland) | 34451811 | Pharmaceuticals (Basel) | 2021 Jul 23 | https://www.ncbi.nlm.nih.gov/pubmed/34451811 |
| Heparin/heparan sulfate analysis by covalently modified reverse polarity capillary zone electrophoresis-mass spectrometry. | Sanderson P, Stickney M, Leach FE 3rd, Xia Q, Yu Y, Zhang F, Linhardt RJ, Amster IJ | Journal of chromatography. A | 29501428 | J Chromatogr A | 2018 Apr 13 | https://www.ncbi.nlm.nih.gov/pubmed/29501428 |
| An Automated, High-Throughput Method for Interpreting the Tandem Mass Spectra of Glycosaminoglycans. | Duan J, Jonathan Amster I | Journal of the American Society for Mass Spectrometry | 29790112 | J Am Soc Mass Spectrom | 2018 Sep | https://www.ncbi.nlm.nih.gov/pubmed/29790112 |
| Interactions of fibroblast growth factors with sulfated galactofucan from Saccharina japonica. | Jin W, Jiang D, Zhang W, Wang C, Xia K, Zhang F, Linhardt RJ | International journal of biological macromolecules | 32464202 | Int J Biol Macromol | 2020 Oct 1 | https://www.ncbi.nlm.nih.gov/pubmed/32464202 |
| Characterization of heparin and severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) spike glycoprotein binding interactions. | Kim SY, Jin W, Sood A, Montgomery DW, Grant OC, Fuster MM, Fu L, Dordick JS, Woods RJ, Zhang F, Linhardt RJ | Antiviral research | 32653452 | Antiviral Res | 2020 Sep | https://www.ncbi.nlm.nih.gov/pubmed/32653452 |
| A rolling circle amplification based platform for ultrasensitive detection of heparin. | Lin L , Li B , Han X , Zhang F , Zhang X , Linhardt RJ | The Analyst | 33226386 | Analyst | 2021 Jan 21 | https://www.ncbi.nlm.nih.gov/pubmed/33226386 |
| The structure-activity relationship of the interactions of SARS-CoV-2 spike glycoproteins with glucuronomannan and sulfated galactofucan from Saccharina japonica. | Jin W, Zhang W, Mitra D, McCandless MG, Sharma P, Tandon R, Zhang F, Linhardt RJ | International journal of biological macromolecules | 32979436 | Int J Biol Macromol | 2020 Nov 15 | https://www.ncbi.nlm.nih.gov/pubmed/32979436 |
| Structural Characterization of Sulfated Glycosaminoglycans Using Charge-Transfer Dissociation. | Pepi LE, Sasiene ZJ, Mendis PM, Jackson GP, Amster IJ | Journal of the American Society for Mass Spectrometry | 32820910 | J Am Soc Mass Spectrom | 2020 Oct 7 | https://www.ncbi.nlm.nih.gov/pubmed/32820910 |
| Structural Characterization of Glycosaminoglycan Carbohydrates Using Ultraviolet Photodissociation. | Klein DR, Leach FE 3rd, Amster IJ, Brodbelt JS | Analytical chemistry | 30932467 | Anal Chem | 2019 May 7 | https://www.ncbi.nlm.nih.gov/pubmed/30932467 |
| Bioengineered production of glycosaminoglycans and their analogues. | Jin W, Zhang F, Linhardt RJ | Systems microbiology and biomanufacturing | 38524245 | Syst Microbiol Biomanuf | 2021 Apr | https://www.ncbi.nlm.nih.gov/pubmed/38524245 |
| Structural Features of Heparin and Its Interactions With Cellular Prion Protein Measured by Surface Plasmon Resonance. | Kim SY, Zhang F, Harris DA, Linhardt RJ | Frontiers in molecular biosciences | 33324681 | Front Mol Biosci | 2020 | https://www.ncbi.nlm.nih.gov/pubmed/33324681 |
| A Revised Structure for the Glycolipid Terminus of Escherichia coli K5 Heparosan Capsular Polysaccharide. | Yan L, Fu L, Xia K, Chen S, Zhang F, Dordick JS, Linhardt RJ | Biomolecules | 33171953 | Biomolecules | 2020 Nov 6 | https://www.ncbi.nlm.nih.gov/pubmed/33171953 |
| Chemical O-sulfation of N-sulfoheparosan: a route to rare N-sulfo-3-O-sulfoglucosamine and 2-O-sulfoglucuronic acid. | Yan L, Brodfueher P, Fu L, Zhang F, Chen S, Dordick JS, Linhardt RJ | Glycoconjugate journal | 32778986 | Glycoconj J | 2020 Oct | https://www.ncbi.nlm.nih.gov/pubmed/32778986 |
| Structural characterization of a clinically described heparin-like substance in plasma causing bleeding. | Yu Y, Bruzdoski K, Kostousov V, Hensch L, Hui SK, Siddiqui F, Farooqui A, Kouta A, Zhang F, Fareed J, Teruya J, Linhardt RJ | Carbohydrate polymers | 32536393 | Carbohydr Polym | 2020 Sep 15 | https://www.ncbi.nlm.nih.gov/pubmed/32536393 |
| A Scoring Algorithm for the Automated Analysis of Glycosaminoglycan MS/MS Data. | Duan J, Pepi L, Amster IJ | Journal of the American Society for Mass Spectrometry | 31673949 | J Am Soc Mass Spectrom | 2019 Dec | https://www.ncbi.nlm.nih.gov/pubmed/31673949 |
| Glycan Markers of Human Stem Cells Assigned with Beam Search Arrays. | Wu N, Silva LM, Liu Y, Zhang Y, Gao C, Zhang F, Fu L, Peng Y, Linhardt R, Kawasaki T, Mulloy B, Chai W, Feizi T | Molecular & cellular proteomics : MCP | 31308253 | Mol Cell Proteomics | 2019 Oct | https://www.ncbi.nlm.nih.gov/pubmed/31308253 |
| Heparan sulfates from bat and human lung and their binding to the spike protein of SARS-CoV-2 virus. | Yan L, Song Y, Xia K, He P, Zhang F, Chen S, Pouliot R, Weiss DJ, Tandon R, Bates JT, Ederer DR, Mitra D, Sharma P, Davis A, Linhardt RJ | Carbohydrate polymers | 33712145 | Carbohydr Polym | 2021 May 15 | https://www.ncbi.nlm.nih.gov/pubmed/33712145 |
| Filter-entrapment enrichment pull-down assay for glycosaminoglycan structural characterization and protein interaction. | Yu Y, Zhang F, Renois-Predelus G, Amster IJ, Linhardt RJ | Carbohydrate polymers | 32718661 | Carbohydr Polym | 2020 Oct 1 | https://www.ncbi.nlm.nih.gov/pubmed/32718661 |
| Recent advances in biotechnology for heparin and heparan sulfate analysis. | Qiao M, Lin L, Xia K, Li J, Zhang X, Linhardt RJ | Talanta | 32887160 | Talanta | 2020 Nov 1 | https://www.ncbi.nlm.nih.gov/pubmed/32887160 |
| Circadian control of heparan sulfate levels times phagocytosis of amyloid beta aggregates. | Clark GT, Yu Y, Urban CA, Fu G, Wang C, Zhang F, Linhardt RJ, Hurley JM | PLoS genetics | 35143487 | PLoS Genet | 2022 Feb | https://www.ncbi.nlm.nih.gov/pubmed/35143487 |
| Inhibiting O-GlcNAcylation impacts p38 and Erk1/2 signaling and perturbs cardiomyocyte hypertrophy. | Papanicolaou KN, Jung J, Ashok D, Zhang W, Modaressanavi A, Avila E, Foster DB, Zachara NE, O'Rourke B | The Journal of biological chemistry | 36642184 | J Biol Chem | 2023 Mar | https://www.ncbi.nlm.nih.gov/pubmed/36642184 |
| Mammalian cell proliferation requires noncatalytic functions of O-GlcNAc transferase. | Levine ZG, Potter SC, Joiner CM, Fei GQ, Nabet B, Sonnett M, Zachara NE, Gray NS, Paulo JA, Walker S | Proceedings of the National Academy of Sciences of the United States of America | 33419956 | Proc Natl Acad Sci U S A | 2021 Jan 26 | https://www.ncbi.nlm.nih.gov/pubmed/33419956 |
| Differential Detection of O-GlcNAcylated proteins in the heart using antibodies. | Narayanan B, Zahra F, Reeves RA, Aggarwal A, O'Meally RN, Henry RK, Craven M, Jacobson A, Cole RN, Kohr MJ, Umapathi P, Zachara NE | Analytical biochemistry | 37507081 | Anal Biochem | 2023 Oct 1 | https://www.ncbi.nlm.nih.gov/pubmed/37507081 |
| Critical observations that shaped our understanding of the function(s) of intracellular glycosylation (O-GlcNAc). | Zachara NE | FEBS letters | 30414174 | FEBS Lett | 2018 Dec | https://www.ncbi.nlm.nih.gov/pubmed/30414174 |
| Detection and Analysis of Proteins Modified by O-Linked N-Acetylglucosamine. | Fahie K, Narayanan B, Zahra F, Reeves R, Fernandes SM, Hart GW, Zachara NE | Current protocols | 34004049 | Curr Protoc | 2021 May | https://www.ncbi.nlm.nih.gov/pubmed/34004049 |
| Cardioprotective O-GlcNAc signaling is elevated in murine female hearts via enhanced O-GlcNAc transferase activity. | Narayanan B, Sinha P, Henry R, Reeves RA, Paolocci N, Kohr MJ, Zachara NE | The Journal of biological chemistry | 37949223 | J Biol Chem | 2023 Dec | https://www.ncbi.nlm.nih.gov/pubmed/37949223 |
| Pseudophosphorylation of Arabidopsis jasmonate biosynthesis enzyme lipoxygenase 2 via mutation of Ser(600) inhibits enzyme activity. | Kaur D, Dorion S, Jmii S, Cappadocia L, Bede JC, Rivoal J | The Journal of biological chemistry | 36639029 | J Biol Chem | 2023 Mar | https://www.ncbi.nlm.nih.gov/pubmed/36639029 |
| Integration of O-GlcNAc into Stress Response Pathways. | Fahie KMM, Papanicolaou KN, Zachara NE | Cells | 36359905 | Cells | 2022 Nov 5 | https://www.ncbi.nlm.nih.gov/pubmed/36359905 |
| Structural origin and rational development of bright red noncanonical variants of green fluorescent protein. | Chen C, Zhang H, Zhang J, Ai HW, Fang C | Physical chemistry chemical physics : PCCP | 37211909 | Phys Chem Chem Phys | 2023 Jun 15 | https://www.ncbi.nlm.nih.gov/pubmed/37211909 |
| Genetically Encoded Green Fluorescent Biosensors for Monitoring UDP-GlcNAc in Live Cells. | Li Z, Zhang J, Ai HW | ACS central science | 34729420 | ACS Cent Sci | 2021 Oct 27 | https://www.ncbi.nlm.nih.gov/pubmed/34729420 |
| Genetically Encoded Boronolectin as a Specific Red Fluorescent UDP-GlcNAc Biosensor. | Zhang J, Li Z, Pang Y, Fan Y, Ai HW | bioRxiv : the preprint server for biology | 36909602 | bioRxiv | 2023 Mar 1 | https://www.ncbi.nlm.nih.gov/pubmed/36909602 |
| A general strategy to red-shift green fluorescent protein-based biosensors. | Zhang S, Ai HW | Nature chemical biology | 32929278 | Nat Chem Biol | 2020 Dec | https://www.ncbi.nlm.nih.gov/pubmed/32929278 |
| Genetically Encoded Boronolectin as a Specific Red Fluorescent UDP-GlcNAc Biosensor. | Zhang J, Li Z, Pang Y, Fan Y, Ai HW | ACS sensors | 37480329 | ACS Sens | 2023 Aug 25 | https://www.ncbi.nlm.nih.gov/pubmed/37480329 |
| GlyGen: Computational and Informatics Resources for Glycoscience. | York WS, Mazumder R, Ranzinger R, Edwards N, Kahsay R, Aoki-Kinoshita KF, Campbell MP, Cummings RD, Feizi T, Martin M, Natale DA, Packer NH, Woods RJ, Agarwal G, Arpinar S, Bhat S, Blake J, Castro LJG, Fochtman B, Gildersleeve J, Goldman R, Holmes X, Jain V, Kulkarni S, Mahadik R, Mehta A, Mousavi R, Nakarakommula S, Navelkar R, Pattabiraman N, Pierce MJ, Ross K, Vasudev P, Vora J, Williamson T, Zhang W | Glycobiology | 31616925 | Glycobiology | 2020 Jan 28 | https://www.ncbi.nlm.nih.gov/pubmed/31616925 |
| N-Glycosylation is required for secretion of the precursor to brain-derived neurotrophic factor (proBDNF) carrying sulfated LacdiNAc structures. | Benicky J, Sanda M, Brnakova Kennedy Z, Goldman R | The Journal of biological chemistry | 31558607 | J Biol Chem | 2019 Nov 8 | https://www.ncbi.nlm.nih.gov/pubmed/31558607 |
| Heparan-6-O-Endosulfatase 2 Promotes Invasiveness of Head and Neck Squamous Carcinoma Cell Lines in Co-Cultures with Cancer-Associated Fibroblasts. | Mukherjee P, Zhou X, Benicky J, Panigrahi A, Aljuhani R, Liu J, Ailles L, Pomin VH, Wang Z, Goldman R | Cancers | 37958342 | Cancers (Basel) | 2023 Oct 27 | https://www.ncbi.nlm.nih.gov/pubmed/37958342 |
| "Ghost" Fragment Ions in Structure and Site-Specific Glycoproteomics Analysis. | Campos D, Girgis M, Yang Q, Zong G, Goldman R, Wang LX, Sanda M | Analytical chemistry | 37382290 | Anal Chem | 2023 Jul 11 | https://www.ncbi.nlm.nih.gov/pubmed/37382290 |
| Glycoforms of human prostate-specific membrane antigen (PSMA) in human cells and prostate tissue. | Yuan W, Liu B, Sanda M, Wei R, Benicky J, Novakova Z, Barinka C, Goldman R | The Prostate | 34662441 | Prostate | 2022 Jan | https://www.ncbi.nlm.nih.gov/pubmed/34662441 |
| Quantitative analysis of core fucosylation of serum proteins in liver diseases by LC-MS-MRM. | Ma J, Sanda M, Wei R, Zhang L, Goldman R | Journal of proteomics | 29427759 | J Proteomics | 2018 Oct 30 | https://www.ncbi.nlm.nih.gov/pubmed/29427759 |
| Quantitative Analysis of Sex-Hormone-Binding Globulin Glycosylation in Liver Diseases by Liquid Chromatography-Mass Spectrometry Parallel Reaction Monitoring. | Yuan W, Benicky J, Wei R, Goldman R, Sanda M | Journal of proteome research | 29972295 | J Proteome Res | 2018 Aug 3 | https://www.ncbi.nlm.nih.gov/pubmed/29972295 |
| Low Collision Energy Fragmentation in Structure-Specific Glycoproteomics Analysis. | Sanda M, Benicky J, Goldman R | Analytical chemistry | 32441515 | Anal Chem | 2020 Jun 16 | https://www.ncbi.nlm.nih.gov/pubmed/32441515 |
| LC-MS/MS-PRM Quantification of IgG Glycoforms Using Stable Isotope Labeled IgG1 Fc Glycopeptide Standard. | Sanda M, Yang Q, Zong G, Chen H, Zheng Z, Dhani H, Khan K, Kroemer A, Wang LX, Goldman R | Journal of proteome research | 36763792 | J Proteome Res | 2023 Apr 7 | https://www.ncbi.nlm.nih.gov/pubmed/36763792 |
| "Ghost" fragment ions in structure and site-specific glycoproteomics analysis. | Campos D, Girgis M, Yang Q, Zong G, Goldman R, Wang LX, Sanda M | bioRxiv : the preprint server for biology | 37292769 | bioRxiv | 2023 May 17 | https://www.ncbi.nlm.nih.gov/pubmed/37292769 |
| Glycan-specific precipitation of glycopeptides in high organic content sample solvents used in HILIC. | Kozlik P, Molnarova K, Jecmen T, Krizek T, Goldman R | Journal of chromatography. B, Analytical technologies in the biomedical and life sciences | 32485649 | J Chromatogr B Analyt Technol Biomed Life Sci | 2020 Aug 1 | https://www.ncbi.nlm.nih.gov/pubmed/32485649 |
| PD-L1 Glycosylation and Its Impact on Binding to Clinical Antibodies. | Benicky J, Sanda M, Brnakova Kennedy Z, Grant OC, Woods RJ, Zwart A, Goldman R | Journal of proteome research | 33073996 | J Proteome Res | 2021 Jan 1 | https://www.ncbi.nlm.nih.gov/pubmed/33073996 |
| N- and O-Glycosylation of the SARS-CoV-2 Spike Protein. | Sanda M, Morrison L, Goldman R | Analytical chemistry | 33406838 | Anal Chem | 2021 Feb 2 | https://www.ncbi.nlm.nih.gov/pubmed/33406838 |
| A Rapid LC-MS/MS-PRM Assay for Serologic Quantification of Sialylated O-HPX Glycoforms in Patients with Liver Fibrosis. | Panigrahi A, Benicky J, Wei R, Ahn J, Goldman R, Sanda M | Molecules (Basel, Switzerland) | 35408612 | Molecules | 2022 Mar 29 | https://www.ncbi.nlm.nih.gov/pubmed/35408612 |
| A multiplexed microflow LC-MS/MS-PRM assay for serologic quantification of IgG N- and HPX O- glycoforms in liver fibrosis. | Panigrahi A, Zhang L, Benicky J, Sanda M, Ahn J, Goldman R | Scientific reports | 36635317 | Sci Rep | 2023 Jan 12 | https://www.ncbi.nlm.nih.gov/pubmed/36635317 |
| Optimized Fragmentation for Quantitative Analysis of Fucosylated N-Glycoproteins by LC-MS-MRM. | Yuan W, Wei R, Goldman R, Sanda M | Analytical chemistry | 31268672 | Anal Chem | 2019 Jul 16 | https://www.ncbi.nlm.nih.gov/pubmed/31268672 |
| Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis. | Kawahara R, Chernykh A, Alagesan K, Bern M, Cao W, Chalkley RJ, Cheng K, Choo MS, Edwards N, Goldman R, Hoffmann M, Hu Y, Huang Y, Kim JY, Kletter D, Liquet B, Liu M, Mechref Y, Meng B, Neelamegham S, Nguyen-Khuong T, Nilsson J, Pap A, Park GW, Parker BL, Pegg CL, Penninger JM, Phung TK, Pioch M, Rapp E, Sakalli E, Sanda M, Schulz BL, Scott NE, Sofronov G, Stadlmann J, Vakhrushev SY, Woo CM, Wu HY, Yang P, Ying W, Zhang H, Zhang Y, Zhao J, Zaia J, Haslam SM, Palmisano G, Yoo JS, Larson G, Khoo KH, Medzihradszky KF, Kolarich D, Packer NH, Thaysen-Andersen M | Nature methods | 34725484 | Nat Methods | 2021 Nov | https://www.ncbi.nlm.nih.gov/pubmed/34725484 |
| Analysis of site and structure specific core fucosylation in liver cirrhosis using exoglycosidase-assisted data-independent LC-MS/MS. | Sanda M, Ahn J, Kozlik P, Goldman R | Scientific reports | 34857845 | Sci Rep | 2021 Dec 2 | https://www.ncbi.nlm.nih.gov/pubmed/34857845 |
| Probing the contribution of individual polypeptide GalNAc-transferase isoforms to the O-glycoproteome by inducible expression in isogenic cell lines. | Hintze J, Ye Z, Narimatsu Y, Madsen TD, Joshi HJ, Goth CK, Linstedt A, Bachert C, Mandel U, Bennett EP, Vakhrushev SY, Schjoldager KT | The Journal of biological chemistry | 30327431 | J Biol Chem | 2018 Dec 7 | https://www.ncbi.nlm.nih.gov/pubmed/30327431 |
| Site-specific glycosylation of Ebola virus glycoprotein by human polypeptide GalNAc-transferase 1 induces cell adhesion defects. | Simon EJ, Linstedt AD | The Journal of biological chemistry | 30389789 | J Biol Chem | 2018 Dec 21 | https://www.ncbi.nlm.nih.gov/pubmed/30389789 |
| Independent amylase gene copy number bursts correlate with dietary preferences in mammals. | Pajic P, Pavlidis P, Dean K, Neznanova L, Romano RA, Garneau D, Daugherity E, Globig A, Ruhl S, Gokcumen O | eLife | 31084707 | Elife | 2019 May 14 | https://www.ncbi.nlm.nih.gov/pubmed/31084707 |
| Modified Sialic Acids on Mucus and Erythrocytes Inhibit Influenza A Virus Hemagglutinin and Neuraminidase Functions. | Barnard KN, Alford-Lawrence BK, Buchholz DW, Wasik BR, LaClair JR, Yu H, Honce R, Ruhl S, Pajic P, Daugherity EK, Chen X, Schultz-Cherry SL, Aguilar HC, Varki A, Parrish CR | Journal of virology | 32051275 | J Virol | 2020 Apr 16 | https://www.ncbi.nlm.nih.gov/pubmed/32051275 |
| Sialic Acid Identity Modulates Host Tropism of Sialoglycan-binding Viridans Group Streptococci. | Morrison KM, Agarwal R, Stubbs HE, Yu H, Ruhl S, Chen X, Sullam PM, Bensing BA, Smith JC, Iverson TM | bioRxiv : the preprint server for biology | 40667320 | bioRxiv | 2025 Jun 26 | https://www.ncbi.nlm.nih.gov/pubmed/40667320 |
| A mechanism of gene evolution generating mucin function. | Pajic P, Shen S, Qu J, May AJ, Knox S, Ruhl S, Gokcumen O | Science advances | 36026444 | Sci Adv | 2022 Aug 26 | https://www.ncbi.nlm.nih.gov/pubmed/36026444 |
| Tandem sialoglycan-binding modules in a Streptococcus sanguinis serine-rich repeat adhesin create target dependent avidity effects. | Stubbs HE, Bensing BA, Yamakawa I, Sharma P, Yu H, Chen X, Sullam PM, Iverson TM | The Journal of biological chemistry | 32820052 | J Biol Chem | 2020 Oct 23 | https://www.ncbi.nlm.nih.gov/pubmed/32820052 |
| Saliva Protein Genes in Humans were Shaped During Primate Evolution. | Pajic P, Landau L, Gokcumen O, Ruhl S | Genome biology and evolution | 40845155 | Genome Biol Evol | 2025 Sep 2 | https://www.ncbi.nlm.nih.gov/pubmed/40845155 |
| Streptococcal Siglec-like adhesins recognize different subsets of human plasma glycoproteins: implications for infective endocarditis. | Bensing BA, Li Q, Park D, Lebrilla CB, Sullam PM | Glycobiology | 29796594 | Glycobiology | 2018 Aug 1 | https://www.ncbi.nlm.nih.gov/pubmed/29796594 |
| The mucin-selective protease StcE enables molecular and functional analysis of human cancer-associated mucins. | Malaker SA, Pedram K, Ferracane MJ, Bensing BA, Krishnan V, Pett C, Yu J, Woods EC, Kramer JR, Westerlind U, Dorigo O, Bertozzi CR | Proceedings of the National Academy of Sciences of the United States of America | 30910957 | Proc Natl Acad Sci U S A | 2019 Apr 9 | https://www.ncbi.nlm.nih.gov/pubmed/30910957 |
| Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation. | Bensing BA, Stubbs HE, Agarwal R, Yamakawa I, Luong K, Solakyildirim K, Yu H, Hadadianpour A, Castro MA, Fialkowski KP, Morrison KM, Wawrzak Z, Chen X, Lebrilla CB, Baudry J, Smith JC, Sullam PM, Iverson TM | Nature communications | 35585145 | Nat Commun | 2022 May 18 | https://www.ncbi.nlm.nih.gov/pubmed/35585145 |
| Emergence of saliva protein genes in the secretory calcium-binding phosphoprotein (SCPP) locus and accelerated evolution in primates. | Pajic P, Landau L, Gokcumen O, Ruhl S | bioRxiv : the preprint server for biology | 38405690 | bioRxiv | 2024 Feb 15 | https://www.ncbi.nlm.nih.gov/pubmed/38405690 |
| Glycan recognition at the saliva - oral microbiome interface. | Cross BW, Ruhl S | Cellular immunology | 30274839 | Cell Immunol | 2018 Nov | https://www.ncbi.nlm.nih.gov/pubmed/30274839 |
| Human and Nonhuman Primate Lineage-Specific Footprints in the Salivary Proteome. | Thamadilok S, Choi KS, Ruhl L, Schulte F, Kazim AL, Hardt M, Gokcumen O, Ruhl S | Molecular biology and evolution | 31614365 | Mol Biol Evol | 2020 Feb 1 | https://www.ncbi.nlm.nih.gov/pubmed/31614365 |
| Sialic acid identity modulates host tropism of sialoglycan-binding viridans group streptococci. | Morrison KM, Agarwal R, Stubbs HE, Yu H, Ruhl S, Chen X, Sullam PM, Bensing BA, Smith JC, Iverson TM | The Journal of biological chemistry | 40749830 | J Biol Chem | 2025 Sep | https://www.ncbi.nlm.nih.gov/pubmed/40749830 |
| Clinical calculator predictive of chemotherapy benefit in stage 1A uterine papillary serous cancers. | Mysona DP, Tran LKH, Tran PMH, Gehrig PA, Van Le L, Ghamande S, Rungruang BJ, Java J, Mann AK, Liao J, Kapp DS, Santos BD, She JX, Chan JK | Gynecologic oncology | 31796203 | Gynecol Oncol | 2020 Jan | https://www.ncbi.nlm.nih.gov/pubmed/31796203 |
| Multiplex Glycan Bead Array (MGBA ) for High Throughput and High Content Analyses of Glycan-Binding Proteins Including Natural Anti-Glycan Antibodies. | Purohit S, She JX | Methods in molecular biology (Clifton, N.J.) | 34972929 | Methods Mol Biol | 2022 | https://www.ncbi.nlm.nih.gov/pubmed/34972929 |
| Use of a glycomics array to establish the anti-carbohydrate antibody repertoire in type 1 diabetes. | Tran PMH, Dong F, Kim E, Richardson KP, Tran LKH, Waugh K, Hopkins D, Cummings RD, Wang PG, Rewers MJ, She JX, Purohit S | Nature communications | 36316364 | Nat Commun | 2022 Nov 1 | https://www.ncbi.nlm.nih.gov/pubmed/36316364 |
| A Phase I Clinical Trial of Guadecitabine and Carboplatin in Platinum-Resistant, Recurrent Ovarian Cancer: Clinical, Pharmacokinetic, and Pharmacodynamic Analyses. | Matei D, Ghamande S, Roman L, Alvarez Secord A, Nemunaitis J, Markham MJ, Nephew KP, Jueliger S, Oganesian A, Naim S, Su XY, Keer H, Azab M, Fleming GF | Clinical cancer research : an official journal of the American Association for Cancer Research | 29500276 | Clin Cancer Res | 2018 May 15 | https://www.ncbi.nlm.nih.gov/pubmed/29500276 |
| Multiplex glycan bead array for high throughput and high content analyses of glycan binding proteins. | Purohit S, Li T, Guan W, Song X, Song J, Tian Y, Li L, Sharma A, Dun B, Mysona D, Ghamande S, Rungruang B, Cummings RD, Wang PG, She JX | Nature communications | 29343722 | Nat Commun | 2018 Jan 17 | https://www.ncbi.nlm.nih.gov/pubmed/29343722 |
| Better survival is observed in cervical cancer patients positive for specific anti-glycan antibodies and receiving brachytherapy. | Purohit S, Ferris DG, Alvarez M, Tran PMH, Tran LKH, Mysona DP, Hopkins D, Zhi W, Dun B, Wallbillich JJ, Cummings RD, Wang PG, She JX | Gynecologic oncology | 31955861 | Gynecol Oncol | 2020 Apr | https://www.ncbi.nlm.nih.gov/pubmed/31955861 |
| Synthetic Oligosaccharide Libraries and Microarray Technology: A Powerful Combination for the Success of Current Glycosaminoglycan Interactomics. | Pomin VH, Wang X | ChemMedChem | 29160016 | ChemMedChem | 2018 Apr 6 | https://www.ncbi.nlm.nih.gov/pubmed/29160016 |
| Glycosaminoglycan-Protein Interactions by Nuclear Magnetic Resonance (NMR) Spectroscopy. | Pomin VH, Wang X | Molecules (Basel, Switzerland) | 30208595 | Molecules | 2018 Sep 11 | https://www.ncbi.nlm.nih.gov/pubmed/30208595 |
| Pleiotrophin interacts with glycosaminoglycans in a highly flexible and adaptable manner. | Ryan E, Shen D, Wang X | FEBS letters | 33529353 | FEBS Lett | 2021 Apr | https://www.ncbi.nlm.nih.gov/pubmed/33529353 |
| Deep Sequencing of Complex Proteoglycans: A Novel Strategy for High Coverage and Site-specific Identification of Glycosaminoglycan-linked Peptides. | Klein JA, Meng L, Zaia J | Molecular & cellular proteomics : MCP | 29773674 | Mol Cell Proteomics | 2018 Aug | https://www.ncbi.nlm.nih.gov/pubmed/29773674 |
| Application of network smoothing to glycan LC-MS profiling. | Klein J, Carvalho L, Zaia J | Bioinformatics (Oxford, England) | 29790907 | Bioinformatics | 2018 Oct 15 | https://www.ncbi.nlm.nih.gov/pubmed/29790907 |
| Comprehensive Glycomic and Proteomic Analysis of Mouse Striatum and Lateral Hypothalamus Following Repeated Exposures to Cocaine or Methamphetamine. | Sethi MK, Maccioni R, Hogan JD, Kawamura T, Repunte-Canonigo V, Chen J, Zaia J, Sanna PP | Molecular & cellular proteomics : MCP | 38880242 | Mol Cell Proteomics | 2024 Aug | https://www.ncbi.nlm.nih.gov/pubmed/38880242 |
| β-catenin/CBP Inhibition Alters Epidermal Growth Factor Receptor Fucosylation Status in Oral Squamous Cell Carcinoma. | Chandler KB, Abalkhail KA, Stahl VL, Nguyen BC, Kartha VK, Bais MV, Nomoto K, Owa T, Monti S, Kukuruzinska MA, Costello CE | Molecular omics | 32203567 | Mol Omics | 2020 Jun 1 | https://www.ncbi.nlm.nih.gov/pubmed/32203567 |
| Relative Retention Time Estimation Improves N-Glycopeptide Identifications by LC-MS/MS. | Klein J, Zaia J | Journal of proteome research | 32223173 | J Proteome Res | 2020 May 1 | https://www.ncbi.nlm.nih.gov/pubmed/32223173 |
| Measuring Site-specific Glycosylation Similarity between Influenza a Virus Variants with Statistical Certainty. | Chang D, Hackett WE, Zhong L, Wan XF, Zaia J | Molecular & cellular proteomics : MCP | 32601173 | Mol Cell Proteomics | 2020 Sep | https://www.ncbi.nlm.nih.gov/pubmed/32601173 |
| Glycoproteomic Sample Processing, LC-MS, and Data Analysis Using GlycReSoft. | Wang M, Shajahan A, Pepi LE, Azadi P, Zaia J | Current protocols | 33761173 | Curr Protoc | 2021 Mar | https://www.ncbi.nlm.nih.gov/pubmed/33761173 |
| Resolving Heparan Sulfate Oligosaccharide Positional Isomers Using Hydrophilic Interaction Liquid Chromatography-Cyclic Ion Mobility Mass Spectrometry. | Cavallero GJ, Zaia J | Analytical chemistry | 35090117 | Anal Chem | 2022 Feb 8 | https://www.ncbi.nlm.nih.gov/pubmed/35090117 |
| In-Depth Matrisome and Glycoproteomic Analysis of Human Brain Glioblastoma Versus Control Tissue. | Sethi MK, Downs M, Shao C, Hackett WE, Phillips JJ, Zaia J | Molecular & cellular proteomics : MCP | 35202840 | Mol Cell Proteomics | 2022 Apr | https://www.ncbi.nlm.nih.gov/pubmed/35202840 |
| Characterization and Quantification of Highly Sulfated Glycosaminoglycan Isomers by Gated-Trapped Ion Mobility Spectrometry Negative Electron Transfer Dissociation MS/MS. | Wei J, Wu J, Tang Y, Ridgeway ME, Park MA, Costello CE, Zaia J, Lin C | Analytical chemistry | 30649866 | Anal Chem | 2019 Feb 19 | https://www.ncbi.nlm.nih.gov/pubmed/30649866 |
| Lectin-mediated binding and sialoglycans of porcine surfactant protein D synergistically neutralize influenza A virus. | van Eijk M, Rynkiewicz MJ, Khatri K, Leymarie N, Zaia J, White MR, Hartshorn KL, Cafarella TR, van Die I, Hessing M, Seaton BA, Haagsman HP | The Journal of biological chemistry | 29769321 | J Biol Chem | 2018 Jul 6 | https://www.ncbi.nlm.nih.gov/pubmed/29769321 |
| Software for Peak Finding and Elemental Composition Assignment for Glycosaminoglycan Tandem Mass Spectra. | Hogan JD, Klein JA, Wu J, Chopra P, Boons GJ, Carvalho L, Lin C, Zaia J | Molecular & cellular proteomics : MCP | 29615495 | Mol Cell Proteomics | 2018 Jul | https://www.ncbi.nlm.nih.gov/pubmed/29615495 |
| A glycomics and proteomics study of aging and Parkinson's disease in human brain. | Raghunathan R, Hogan JD, Labadorf A, Myers RH, Zaia J | Scientific reports | 32733076 | Sci Rep | 2020 Jul 30 | https://www.ncbi.nlm.nih.gov/pubmed/32733076 |
| Glycomic and Proteomic Changes in Aging Brain Nigrostriatal Pathway. | Raghunathan R, Polinski NK, Klein JA, Hogan JD, Shao C, Khatri K, Leon D, McComb ME, Manfredsson FP, Sortwell CE, Zaia J | Molecular & cellular proteomics : MCP | 29915149 | Mol Cell Proteomics | 2018 Sep | https://www.ncbi.nlm.nih.gov/pubmed/29915149 |
| Characterization of Isomeric Glycans by Reversed Phase Liquid Chromatography-Electronic Excitation Dissociation Tandem Mass Spectrometry. | Tang Y, Wei J, Costello CE, Lin C | Journal of the American Society for Mass Spectrometry | 29654534 | J Am Soc Mass Spectrom | 2018 Jun | https://www.ncbi.nlm.nih.gov/pubmed/29654534 |
| N-glycosylation in Spodoptera frugiperda (Lepidoptera: Noctuidae) midgut membrane-bound glycoproteins. | Fuzita FJ, Chandler KB, Haserick JR, Terra WR, Ferreira C, Costello CE | Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology | 32553552 | Comp Biochem Physiol B Biochem Mol Biol | 2020 Aug-Sep | https://www.ncbi.nlm.nih.gov/pubmed/32553552 |
| Calculating Glycoprotein Similarities From Mass Spectrometric Data. | Hackett WE, Zaia J | Molecular & cellular proteomics : MCP | 32883803 | Mol Cell Proteomics | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/32883803 |
| Influence of saccharide modifications on heparin lyase III substrate specificities. | Wu J, Chopra P, Boons GJ, Zaia J | Glycobiology | 33822051 | Glycobiology | 2022 Mar 30 | https://www.ncbi.nlm.nih.gov/pubmed/33822051 |
| GAGrank: Software for Glycosaminoglycan Sequence Ranking Using a Bipartite Graph Model. | Hogan JD, Wu J, Klein JA, Lin C, Carvalho L, Zaia J | Molecular & cellular proteomics : MCP | 33992776 | Mol Cell Proteomics | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/33992776 |
| glypy: An Open Source Glycoinformatics Library. | Klein J, Zaia J | Journal of proteome research | 31310539 | J Proteome Res | 2019 Sep 6 | https://www.ncbi.nlm.nih.gov/pubmed/31310539 |
| Why Glycosylation Matters in Building a Better Flu Vaccine. | Chang D, Zaia J | Molecular & cellular proteomics : MCP | 31604803 | Mol Cell Proteomics | 2019 Dec | https://www.ncbi.nlm.nih.gov/pubmed/31604803 |
| RAMZIS: a bioinformatic toolkit for rigorous assessment of the alterations to glycoprotein structure that occur during biological processes. | Hackett WE, Chang D, Carvalho L, Zaia J | bioRxiv : the preprint server for biology | 37398011 | bioRxiv | 2023 Jun 1 | https://www.ncbi.nlm.nih.gov/pubmed/37398011 |
| Sensitive method for glycosaminoglycan analysis of tissue sections. | Turiák L, Tóth G, Ozohanics O, Révész Á, Ács A, Vékey K, Zaia J, Drahos L | Journal of chromatography. A | 29506752 | J Chromatogr A | 2018 Apr 6 | https://www.ncbi.nlm.nih.gov/pubmed/29506752 |
| Negative Electron Transfer Dissociation Sequencing of 3-O-Sulfation-Containing Heparan Sulfate Oligosaccharides. | Wu J, Wei J, Hogan JD, Chopra P, Joshi A, Lu W, Klein J, Boons GJ, Lin C, Zaia J | Journal of the American Society for Mass Spectrometry | 29564812 | J Am Soc Mass Spectrom | 2018 Jun | https://www.ncbi.nlm.nih.gov/pubmed/29564812 |
| Sequencing Heparan Sulfate Using HILIC LC-NETD-MS/MS. | Wu J, Wei J, Chopra P, Boons GJ, Lin C, Zaia J | Analytical chemistry | 31423779 | Anal Chem | 2019 Sep 17 | https://www.ncbi.nlm.nih.gov/pubmed/31423779 |
| On-slide tissue digestion for mass spectrometry based glycomic and proteomic profiling. | Raghunathan R, Sethi MK, Zaia J | MethodsX | 31660297 | MethodsX | 2019 | https://www.ncbi.nlm.nih.gov/pubmed/31660297 |
| psims - A Declarative Writer for mzML and mzIdentML for Python. | Klein J, Zaia J | Molecular & cellular proteomics : MCP | 30563850 | Mol Cell Proteomics | 2019 Mar | https://www.ncbi.nlm.nih.gov/pubmed/30563850 |
| Glycosylation of Serum Clusterin in Wild-Type Transthyretin-Associated (ATTRwt) Amyloidosis: A Study of Disease-Associated Compositional Features Using Mass Spectrometry Analyses. | Torres-Arancivia CM, Chang D, Hackett WE, Zaia J, Connors LH | Biochemistry | 33141553 | Biochemistry | 2020 Nov 17 | https://www.ncbi.nlm.nih.gov/pubmed/33141553 |
| Proteomics, Glycomics, and Glycoproteomics of Matrisome Molecules. | Raghunathan R, Sethi MK, Klein JA, Zaia J | Molecular & cellular proteomics : MCP | 31471497 | Mol Cell Proteomics | 2019 Nov | https://www.ncbi.nlm.nih.gov/pubmed/31471497 |
| Multi-task learning sparse group lasso: a method for quantifying antigenicity of influenza A(H1N1) virus using mutations and variations in glycosylation of Hemagglutinin. | Li L, Chang D, Han L, Zhang X, Zaia J, Wan XF | BMC bioinformatics | 32393178 | BMC Bioinformatics | 2020 May 11 | https://www.ncbi.nlm.nih.gov/pubmed/32393178 |
| Proteomic and biological profiling of extracellular vesicles from Alzheimer's disease human brain tissues. | Muraoka S, DeLeo AM, Sethi MK, Yukawa-Takamatsu K, Yang Z, Ko J, Hogan JD, Ruan Z, You Y, Wang Y, Medalla M, Ikezu S, Chen M, Xia W, Gorantla S, Gendelman HE, Issadore D, Zaia J, Ikezu T | Alzheimer's & dementia : the journal of the Alzheimer's Association | 32301581 | Alzheimers Dement | 2020 Jun | https://www.ncbi.nlm.nih.gov/pubmed/32301581 |
| Serial in-solution digestion protocol for mass spectrometry-based glycomics and proteomics analysis. | Sethi MK, Downs M, Zaia J | Molecular omics | 32309832 | Mol Omics | 2020 Aug 1 | https://www.ncbi.nlm.nih.gov/pubmed/32309832 |
| The 3-O-sulfation of heparan sulfate modulates protein binding and lyase degradation. | Chopra P, Joshi A, Wu J, Lu W, Yadavalli T, Wolfert MA, Shukla D, Zaia J, Boons GJ | Proceedings of the National Academy of Sciences of the United States of America | 33441484 | Proc Natl Acad Sci U S A | 2021 Jan 19 | https://www.ncbi.nlm.nih.gov/pubmed/33441484 |
| Toward Automatic and Comprehensive Glycan Characterization by Online PGC-LC-EED MS/MS. | Wei J, Tang Y, Bai Y, Zaia J, Costello CE, Hong P, Lin C | Analytical chemistry | 31829560 | Anal Chem | 2020 Jan 7 | https://www.ncbi.nlm.nih.gov/pubmed/31829560 |
| A Perspective on the Confident Comparison of Glycoprotein Site-Specific Glycosylation in Sample Cohorts. | Klein JA, Zaia J | Biochemistry | 31833756 | Biochemistry | 2020 Sep 1 | https://www.ncbi.nlm.nih.gov/pubmed/31833756 |
| Improving Statistical Certainty of Glycosylation Similarity between Influenza A Virus Variants Using Data-Independent Acquisition Mass Spectrometry. | Chang D, Klein J, Hackett WE, Nalehua MR, Wan XF, Zaia J | Molecular & cellular proteomics : MCP | 36103992 | Mol Cell Proteomics | 2022 Nov | https://www.ncbi.nlm.nih.gov/pubmed/36103992 |
| Data-independent acquisition mass spectrometry for site-specific glycoproteomics characterization of SARS-CoV-2 spike protein. | Chang D, Klein JA, Nalehua MR, Hackett WE, Zaia J | Analytical and bioanalytical chemistry | 34635934 | Anal Bioanal Chem | 2021 Dec | https://www.ncbi.nlm.nih.gov/pubmed/34635934 |
| RAMZIS: a bioinformatic toolkit for rigorous assessment of the alterations to glycoprotein composition that occur during biological processes. | Hackett WE, Chang D, Carvalho L, Zaia J | Bioinformatics advances | 38384861 | Bioinform Adv | 2024 | https://www.ncbi.nlm.nih.gov/pubmed/38384861 |
| Metabolic Incorporation of N-Acetyl Muramic Acid Probes into Bacterial Peptidoglycan. | DeMeester KE, Liang H, Zhou J, Wodzanowski KA, Prather BL, Santiago CC, Grimes CL | Current protocols in chemical biology | 31763799 | Curr Protoc Chem Biol | 2019 Dec | https://www.ncbi.nlm.nih.gov/pubmed/31763799 |
| Distinct cytoskeletal proteins define zones of enhanced cell wall synthesis in Helicobacter pylori. | Taylor JA, Bratton BP, Sichel SR, Blair KM, Jacobs HM, DeMeester KE, Kuru E, Gray J, Biboy J, VanNieuwenhze MS, Vollmer W, Grimes CL, Shaevitz JW, Salama NR | eLife | 31916938 | Elife | 2020 Jan 9 | https://www.ncbi.nlm.nih.gov/pubmed/31916938 |
| Minimalist Tetrazine N-Acetyl Muramic Acid Probes for Rapid and Efficient Labeling of Commensal and Pathogenic Peptidoglycans in Living Bacterial Culture and During Macrophage Invasion. | Hillman AS, Hyland SN, Wodzanowski KA, Moore DL, Ratna S, Jemas A, Sandles LD, Chaya T, Ghosh A, Fox JM, Grimes CL | Journal of the American Chemical Society | 38427023 | J Am Chem Soc | 2024 Mar 13 | https://www.ncbi.nlm.nih.gov/pubmed/38427023 |
| Synthesis of Functionalized N-Acetyl Muramic Acids To Probe Bacterial Cell Wall Recycling and Biosynthesis. | DeMeester KE, Liang H, Jensen MR, Jones ZS, D'Ambrosio EA, Scinto SL, Zhou J, Grimes CL | Journal of the American Chemical Society | 29986130 | J Am Chem Soc | 2018 Aug 1 | https://www.ncbi.nlm.nih.gov/pubmed/29986130 |
| Cell morphology as a virulence determinant: lessons from Helicobacter pylori. | Salama NR | Current opinion in microbiology | 32014717 | Curr Opin Microbiol | 2020 Apr | https://www.ncbi.nlm.nih.gov/pubmed/32014717 |
| Tools for probing host-bacteria interactions in the gut microenvironment: From molecular to cellular levels. | Wodzanowski KA, Cassel SE, Grimes CL, Kloxin AM | Bioorganic & medicinal chemistry letters | 32223923 | Bioorg Med Chem Lett | 2020 May 15 | https://www.ncbi.nlm.nih.gov/pubmed/32223923 |
| Membrane-partitioned cell wall synthesis in mycobacteria. | García-Heredia A, Kado T, Sein CE, Puffal J, Osman SH, Judd J, Gray TA, Morita YS, Siegrist MS | eLife | 33544079 | Elife | 2021 Feb 5 | https://www.ncbi.nlm.nih.gov/pubmed/33544079 |
| A two-track model for the spatiotemporal coordination of bacterial septal cell wall synthesis revealed by single-molecule imaging of FtsW. | Yang X, McQuillen R, Lyu Z, Phillips-Mason P, De La Cruz A, McCausland JW, Liang H, DeMeester KE, Santiago CC, Grimes CL, de Boer P, Xiao J | Nature microbiology | 33495624 | Nat Microbiol | 2021 May | https://www.ncbi.nlm.nih.gov/pubmed/33495624 |
| Investigating Peptidoglycan Recycling Pathways in Tannerella forsythia with N-Acetylmuramic Acid Bioorthogonal Probes. | Wodzanowski KA, Hyland SN, Chinthamani S, Sandles LD, Honma K, Sharma A, Grimes CL | ACS infectious diseases | 35924866 | ACS Infect Dis | 2022 Sep 9 | https://www.ncbi.nlm.nih.gov/pubmed/35924866 |
| DivIVA concentrates mycobacterial cell envelope assembly for initiation and stabilization of polar growth. | Melzer ES, Sein CE, Chambers JJ, Siegrist MS | Cytoskeleton (Hoboken, N.J.) | 30160378 | Cytoskeleton (Hoboken) | 2018 Dec | https://www.ncbi.nlm.nih.gov/pubmed/30160378 |
| Peptidoglycan precursor synthesis along the sidewall of pole-growing mycobacteria. | García-Heredia A, Pohane AA, Melzer ES, Carr CR, Fiolek TJ, Rundell SR, Lim HC, Wagner JC, Morita YS, Swarts BM, Siegrist MS | eLife | 30198841 | Elife | 2018 Sep 10 | https://www.ncbi.nlm.nih.gov/pubmed/30198841 |
| Utility of bacterial peptidoglycan recycling enzymes in the chemoenzymatic synthesis of valuable UDP sugar substrates. | Ukaegbu OI, DeMeester KE, Liang H, Brown AR, Jones ZS, Grimes CL | Methods in enzymology | 32416908 | Methods Enzymol | 2020 | https://www.ncbi.nlm.nih.gov/pubmed/32416908 |
| Protected N-Acetyl Muramic Acid Probes Improve Bacterial Peptidoglycan Incorporation via Metabolic Labeling. | Brown AR, Wodzanowski KA, Santiago CC, Hyland SN, Follmar JL, Asare-Okai P, Grimes CL | ACS chemical biology | 34506714 | ACS Chem Biol | 2021 Oct 15 | https://www.ncbi.nlm.nih.gov/pubmed/34506714 |
| Localizing Peptidoglycan Synthesis in Helicobacter pylori using Clickable Metabolic Probes. | Taylor JA, Santiago CC, Gray J, Wodzanowski KA, DeMeester KE, Biboy J, Vollmer W, Grimes CL, Salama NR | Current protocols | 33844460 | Curr Protoc | 2021 Apr | https://www.ncbi.nlm.nih.gov/pubmed/33844460 |
| The Legionella pneumophila peptidoglycan recycling kinase, AmgK, is essential for survival and replication inside host alveolar macrophages. | Ratna S, Pradhan L, Vasconcelos MP, Acharya A, Carnahan B, Wang A, Ghosh A, Bolt A, Ellis J, Hyland SN, Hillman AS, Fox JM, Kloxin A, Neunuebel MR, Grimes CL | bioRxiv : the preprint server for biology | 40166355 | bioRxiv | 2025 Mar 22 | https://www.ncbi.nlm.nih.gov/pubmed/40166355 |
| Identification and characterization of mono- and bifunctional galactan synthases in the pediatric pathogen Kingella kingae. | Porsch EA, Allas MJ, Montoya NR, Muñoz VL, Tan L, Muszyński A, Azadi P, Hyland SN, Grimes CL, Kao TT, Lowary TL, St Geme JW 3rd | The Journal of biological chemistry | 40484378 | J Biol Chem | 2025 Jul | https://www.ncbi.nlm.nih.gov/pubmed/40484378 |
| Coupling Novel Probes with Molecular Localization Microscopy Reveals Cell Wall Homeostatic Mechanisms in Staphylococcus aureus. | Lund VA, Gangotra H, Zhao Z, Sutton JAF, Wacnik K, DeMeester K, Liang H, Santiago C, Leimkuhler Grimes C, Jones S, Foster SJ | ACS chemical biology | 36414253 | ACS Chem Biol | 2022 Dec 16 | https://www.ncbi.nlm.nih.gov/pubmed/36414253 |
| Chemical Biology Tools for Examining the Bacterial Cell Wall. | Brown AR, Gordon RA, Hyland SN, Siegrist MS, Grimes CL | Cell chemical biology | 32822617 | Cell Chem Biol | 2020 Aug 20 | https://www.ncbi.nlm.nih.gov/pubmed/32822617 |
| High-Throughput miRFluR Platform Identifies miRNA Regulating B3GLCT That Predict Peters' Plus Syndrome Phenotype, Supporting the miRNA Proxy Hypothesis. | Thu CT, Chung JY, Dhawan D, Vaiana CA, Mahal LK | ACS chemical biology | 34085516 | ACS Chem Biol | 2021 Oct 15 | https://www.ncbi.nlm.nih.gov/pubmed/34085516 |
| GlycoEnzOnto: a GlycoEnzyme pathway and molecular function ontology. | Groth T, Diehl AD, Gunawan R, Neelamegham S | Bioinformatics (Oxford, England) | 36282863 | Bioinformatics | 2022 Dec 13 | https://www.ncbi.nlm.nih.gov/pubmed/36282863 |
| microRNAs Regulate Cellular Magnesium by Tuning Expression of the Plasma Membrane Protein CNNM4. | Lazarou TS, Dehghan Harati H, Mahal LK, Buccella D | ACS chemical biology | 40862638 | ACS Chem Biol | 2025 Sep 19 | https://www.ncbi.nlm.nih.gov/pubmed/40862638 |
| Sweet Control: MicroRNA Regulation of the Glycome. | Thu CT, Mahal LK | Biochemistry | 31585501 | Biochemistry | 2020 Sep 1 | https://www.ncbi.nlm.nih.gov/pubmed/31585501 |
| Gly-Spec: a webtool for predicting glycan specificity by integrating glycan array screening data and 3D structure. | Grant OC, Xue X, Ra D, Khatamian A, Foley BL, Woods RJ | Glycobiology | 28120784 | Glycobiology | 2016 Oct | https://www.ncbi.nlm.nih.gov/pubmed/28120784 |
| A Traveling Wave Ion Mobility Spectrometry (TWIMS) Study of the Robo1-Heparan Sulfate Interaction. | Zhao Y, Yang JY, Thieker DF, Xu Y, Zong C, Boons GJ, Liu J, Woods RJ, Moremen KW, Amster IJ | Journal of the American Society for Mass Spectrometry | 29520710 | J Am Soc Mass Spectrom | 2018 Jun | https://www.ncbi.nlm.nih.gov/pubmed/29520710 |
| Defining the Specificity of Carbohydrate-Protein Interactions by Quantifying Functional Group Contributions. | Sood A, Gerlits OO, Ji Y, Bovin NV, Coates L, Woods RJ | Journal of chemical information and modeling | 30086239 | J Chem Inf Model | 2018 Sep 24 | https://www.ncbi.nlm.nih.gov/pubmed/30086239 |
| The Tetrameric Plant Lectin BanLec Neutralizes HIV through Bidentate Binding to Specific Viral Glycans. | Hopper JTS, Ambrose S, Grant OC, Krumm SA, Allison TM, Degiacomi MT, Tully MD, Pritchard LK, Ozorowski G, Ward AB, Crispin M, Doores KJ, Woods RJ, Benesch JLP, Robinson CV, Struwe WB | Structure (London, England : 1993) | 28434916 | Structure | 2017 May 2 | https://www.ncbi.nlm.nih.gov/pubmed/28434916 |
| Three mutations switch H7N9 influenza to human-type receptor specificity. | de Vries RP, Peng W, Grant OC, Thompson AJ, Zhu X, Bouwman KM, de la Pena ATT, van Breemen MJ, Ambepitiya Wickramasinghe IN, de Haan CAM, Yu W, McBride R, Sanders RW, Woods RJ, Verheije MH, Wilson IA, Paulson JC | PLoS pathogens | 28617868 | PLoS Pathog | 2017 Jun | https://www.ncbi.nlm.nih.gov/pubmed/28617868 |
| GAG Builder: a web-tool for modeling 3D structures of glycosaminoglycans. | Singh A, Montgomery D, Xue X, Foley BL, Woods RJ | Glycobiology | 31034567 | Glycobiology | 2019 Jul 1 | https://www.ncbi.nlm.nih.gov/pubmed/31034567 |
| Hierarchical Multivalent Effects Control Influenza Host Specificity. | Overeem NJ, Hamming PHE, Grant OC, Di Iorio D, Tieke M, Bertolino MC, Li Z, Vos G, de Vries RP, Woods RJ, Tito NB, Boons GPH, van der Vries E, Huskens J | ACS central science | 33376792 | ACS Cent Sci | 2020 Dec 23 | https://www.ncbi.nlm.nih.gov/pubmed/33376792 |
| Reconciling MA'AT and molecular dynamics models of linkage conformation in oligosaccharides. | Meredith RJ, Woods RJ, Carmichael I, Serianni AS | Physical chemistry chemical physics : PCCP | 32597425 | Phys Chem Chem Phys | 2020 Jul 8 | https://www.ncbi.nlm.nih.gov/pubmed/32597425 |
| A combined computational-experimental approach to define the structural origin of antibody recognition of sialyl-Tn, a tumor-associated carbohydrate antigen. | Amon R, Grant OC, Leviatan Ben-Arye S, Makeneni S, Nivedha AK, Marshanski T, Norn C, Yu H, Glushka JN, Fleishman SJ, Chen X, Woods RJ, Padler-Karavani V | Scientific reports | 30018351 | Sci Rep | 2018 Jul 17 | https://www.ncbi.nlm.nih.gov/pubmed/30018351 |
| Rapidly Display Glycan Symbols in 3D Structures: 3D-SNFG in LiteMol. | Sehnal D, Grant OC | Journal of proteome research | 30179493 | J Proteome Res | 2019 Feb 1 | https://www.ncbi.nlm.nih.gov/pubmed/30179493 |
| Cross-Ring Fragmentation Patterns in the Tandem Mass Spectra of Underivatized Sialylated Oligosaccharides and Their Special Suitability for Spectrum Library Searching. | De Leoz MLA, Simón-Manso Y, Woods RJ, Stein SE | Journal of the American Society for Mass Spectrometry | 30565163 | J Am Soc Mass Spectrom | 2019 Mar | https://www.ncbi.nlm.nih.gov/pubmed/30565163 |
| Fluorescent Trimeric Hemagglutinins Reveal Multivalent Receptor Binding Properties. | Nemanichvili N, Tomris I, Turner HL, McBride R, Grant OC, van der Woude R, Aldosari MH, Pieters RJ, Woods RJ, Paulson JC, Boons GJ, Ward AB, Verheije MH, de Vries RP | Journal of molecular biology | 30597163 | J Mol Biol | 2019 Feb 15 | https://www.ncbi.nlm.nih.gov/pubmed/30597163 |
| Synthesis and O-Glycosidic Linkage Conformational Analysis of (13)C-Labeled Oligosaccharide Fragments of an Antifreeze Glycolipid. | Zhang W, Meredith R, Yoon MK, Wang X, Woods RJ, Carmichael I, Serianni AS | The Journal of organic chemistry | 30624062 | J Org Chem | 2019 Feb 15 | https://www.ncbi.nlm.nih.gov/pubmed/30624062 |
| O(2) sensing-associated glycosylation exposes the F-box-combining site of the Dictyostelium Skp1 subunit in E3 ubiquitin ligases. | Sheikh MO, Thieker D, Chalmers G, Schafer CM, Ishihara M, Azadi P, Woods RJ, Glushka JN, Bendiak B, Prestegard JH, West CM | The Journal of biological chemistry | 28928219 | J Biol Chem | 2017 Nov 17 | https://www.ncbi.nlm.nih.gov/pubmed/28928219 |
| Downstream Products are Potent Inhibitors of the Heparan Sulfate 2-O-Sulfotransferase. | Thieker DF, Xu Y, Chapla D, Nora C, Qiu H, Felix T, Wang L, Moremen KW, Liu J, Esko JD, Woods RJ | Scientific reports | 30087361 | Sci Rep | 2018 Aug 7 | https://www.ncbi.nlm.nih.gov/pubmed/30087361 |
| Predicting the Structures of Glycans, Glycoproteins, and Their Complexes. | Woods RJ | Chemical reviews | 30091597 | Chem Rev | 2018 Sep 12 | https://www.ncbi.nlm.nih.gov/pubmed/30091597 |
| Comparison of cellooligosaccharide conformations in complexes with proteins with energy maps for cellobiose. | French AD, Montgomery DW, Prevost NT, Edwards JV, Woods RJ | Carbohydrate polymers | 33910736 | Carbohydr Polym | 2021 Jul 15 | https://www.ncbi.nlm.nih.gov/pubmed/33910736 |
| Virus-Receptor Interactions of Glycosylated SARS-CoV-2 Spike and Human ACE2 Receptor. | Zhao P, Praissman JL, Grant OC, Cai Y, Xiao T, Rosenbalm KE, Aoki K, Kellman BP, Bridger R, Barouch DH, Brindley MA, Lewis NE, Tiemeyer M, Chen B, Woods RJ, Wells L | bioRxiv : the preprint server for biology | 32743578 | bioRxiv | 2020 Jul 24 | https://www.ncbi.nlm.nih.gov/pubmed/32743578 |
| Virus-Receptor Interactions of Glycosylated SARS-CoV-2 Spike and Human ACE2 Receptor. | Zhao P, Praissman JL, Grant OC, Cai Y, Xiao T, Rosenbalm KE, Aoki K, Kellman BP, Bridger R, Barouch DH, Brindley MA, Lewis NE, Tiemeyer M, Chen B, Woods RJ, Wells L | Cell host & microbe | 32841605 | Cell Host Microbe | 2020 Oct 7 | https://www.ncbi.nlm.nih.gov/pubmed/32841605 |
| Allosteric regulation of lysosomal enzyme recognition by the cation-independent mannose 6-phosphate receptor. | Olson LJ, Misra SK, Ishihara M, Battaile KP, Grant OC, Sood A, Woods RJ, Kim JP, Tiemeyer M, Ren G, Sharp JS, Dahms NM | Communications biology | 32908216 | Commun Biol | 2020 Sep 9 | https://www.ncbi.nlm.nih.gov/pubmed/32908216 |
| Analysis of the SARS-CoV-2 spike protein glycan shield reveals implications for immune recognition. | Grant OC, Montgomery D, Ito K, Woods RJ | Scientific reports | 32929138 | Sci Rep | 2020 Sep 14 | https://www.ncbi.nlm.nih.gov/pubmed/32929138 |
| Generating 3D models of complex carbohydrates with GLYCAM-Web. | Grant OC, Wentworth D, Holmes SG, Kandel R, Sehnal D, Wang X, Xiao Y, Sheppard P, Grelsson T, Coulter A, Miller G, Singh A, Nagarajan M, Foley BL, Woods RJ | Nature methods | 41872371 | Nat Methods | 2026 Apr | https://www.ncbi.nlm.nih.gov/pubmed/41872371 |
| Enhanced Human-Type Receptor Binding by Ferret-Transmissible H5N1 with a K193T Mutation. | Peng W, Bouwman KM, McBride R, Grant OC, Woods RJ, Verheije MH, Paulson JC, de Vries RP | Journal of virology | 29491160 | J Virol | 2018 May 15 | https://www.ncbi.nlm.nih.gov/pubmed/29491160 |
| O-glycosylation on cerebrospinal fluid and plasma apolipoprotein E differs in the lipid-binding domain. | Flowers SA, Grant OC, Woods RJ, Rebeck GW | Glycobiology | 31616924 | Glycobiology | 2020 Jan 28 | https://www.ncbi.nlm.nih.gov/pubmed/31616924 |
| Recent H3N2 Viruses Have Evolved Specificity for Extended, Branched Human-type Receptors, Conferring Potential for Increased Avidity. | Peng W, de Vries RP, Grant OC, Thompson AJ, McBride R, Tsogtbaatar B, Lee PS, Razi N, Wilson IA, Woods RJ, Paulson JC | Cell host & microbe | 28017661 | Cell Host Microbe | 2017 Jan 11 | https://www.ncbi.nlm.nih.gov/pubmed/28017661 |
| New insights into influenza A specificity: an evolution of paradigms. | Ji Y, White YJ, Hadden JA, Grant OC, Woods RJ | Current opinion in structural biology | 28675835 | Curr Opin Struct Biol | 2017 Jun | https://www.ncbi.nlm.nih.gov/pubmed/28675835 |
| Induction of Antibodies Directed Against Branched Core O-Mannosyl Glycopeptides-Selectivity Complimentary to the ConA Lectin. | Yu J, Grant OC, Pett C, Strahl S, Stahl S, Woods RJ, Westerlind U | Chemistry (Weinheim an der Bergstrasse, Germany) | 28079948 | Chemistry | 2017 Mar 8 | https://www.ncbi.nlm.nih.gov/pubmed/28079948 |
| Conformational Populations of β-(1→4) O-Glycosidic Linkages Using Redundant NMR J-Couplings and Circular Statistics. | Zhang W, Turney T, Meredith R, Pan Q, Sernau L, Wang X, Hu X, Woods RJ, Carmichael I, Serianni AS | The journal of physical chemistry. B | 28296420 | J Phys Chem B | 2017 Apr 13 | https://www.ncbi.nlm.nih.gov/pubmed/28296420 |
| Structural Analysis of the Glycosylated Intact HIV-1 gp120-b12 Antibody Complex Using Hydroxyl Radical Protein Footprinting. | Li X, Grant OC, Ito K, Wallace A, Wang S, Zhao P, Wells L, Lu S, Woods RJ, Sharp JS | Biochemistry | 28102671 | Biochemistry | 2017 Feb 21 | https://www.ncbi.nlm.nih.gov/pubmed/28102671 |
| Applying Pose Clustering and MD Simulations To Eliminate False Positives in Molecular Docking. | Makeneni S, Thieker DF, Woods RJ | Journal of chemical information and modeling | 29431438 | J Chem Inf Model | 2018 Mar 26 | https://www.ncbi.nlm.nih.gov/pubmed/29431438 |
| Structural Rearrangements Maintain the Glycan Shield of an HIV-1 Envelope Trimer After the Loss of a Glycan. | Ferreira RC, Grant OC, Moyo T, Dorfman JR, Woods RJ, Travers SA, Wood NT | Scientific reports | 30302011 | Sci Rep | 2018 Oct 9 | https://www.ncbi.nlm.nih.gov/pubmed/30302011 |
| Effect of hydroxylysine-O-glycosylation on the structure of type I collagen molecule: A computational study. | Tang M, Wang X, Gandhi NS, Foley BL, Burrage K, Woods RJ, Gu Y | Glycobiology | 32188979 | Glycobiology | 2020 Sep 28 | https://www.ncbi.nlm.nih.gov/pubmed/32188979 |
| Generating 3D Models of Carbohydrates with GLYCAM-Web. | Grant OC, Wentworth D, Holmes SG, Kandel R, Sehnal D, Wang X, Xiao Y, Sheppard P, Grelsson T, Coulter A, Miller G, Foley BL, Woods RJ | bioRxiv : the preprint server for biology | 40654779 | bioRxiv | 2025 May 9 | https://www.ncbi.nlm.nih.gov/pubmed/40654779 |
| GLYCAM Bacterial Carbohydrate Builder: a web-tool for modelling 3D structures of bacterial glycans. | Nieto-Fabregat F, Grant OC, Wang X, Wentworth D, Woods RJ, Marchetti R | bioRxiv : the preprint server for biology | 41659496 | bioRxiv | 2026 Jan 27 | https://www.ncbi.nlm.nih.gov/pubmed/41659496 |
| Cellular O-Glycome Reporter/Amplification (CORA): Analytical and Preparative Tools to Study Mucin-Type O-Glycans of Living Cells. | Kudelka MR, Li Z, Chernova TA, Smith DF, Song X, Cummings RD, Ju T | Current protocols | 34101390 | Curr Protoc | 2021 Jun | https://www.ncbi.nlm.nih.gov/pubmed/34101390 |
| Morphology of Biomaterials Affect O-Glycosylation of HUVECs. | Hu X, Sheng J, Guan G, Ju T, Smith DF, Wang L | Journal of functional biomaterials | 36412876 | J Funct Biomater | 2022 Nov 11 | https://www.ncbi.nlm.nih.gov/pubmed/36412876 |
| Synthesis and Characterization of Versatile O-Glycan Precursors for Cellular O-Glycomics. | Zhang Q, Li Z, Chernova T, Saikam V, Cummings R, Song X, Ju T, Smith DF, Wang PG | ACS synthetic biology | 31638776 | ACS Synth Biol | 2019 Nov 15 | https://www.ncbi.nlm.nih.gov/pubmed/31638776 |
| A Pragmatic Guide to Enrichment Strategies for Mass Spectrometry-Based Glycoproteomics. | Riley NM, Bertozzi CR, Pitteri SJ | Molecular & cellular proteomics : MCP | 33583771 | Mol Cell Proteomics | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/33583771 |
| Mapping and Quantification of Over 2000 O-linked Glycopeptides in Activated Human T Cells with Isotope-Targeted Glycoproteomics (Isotag). | Woo CM, Lund PJ, Huang AC, Davis MM, Bertozzi CR, Pitteri SJ | Molecular & cellular proteomics : MCP | 29351928 | Mol Cell Proteomics | 2018 Apr | https://www.ncbi.nlm.nih.gov/pubmed/29351928 |
| Bioorthogonal Labeling of Human Prostate Cancer Tissue Slice Cultures for Glycoproteomics. | Spiciarich DR, Nolley R, Maund SL, Purcell SC, Herschel J, Iavarone AT, Peehl DM, Bertozzi CR | Angewandte Chemie (International ed. in English) | 28649697 | Angew Chem Int Ed Engl | 2017 Jul 24 | https://www.ncbi.nlm.nih.gov/pubmed/28649697 |
| O-Pair Search with MetaMorpheus for O-glycopeptide characterization. | Lu L, Riley NM, Shortreed MR, Bertozzi CR, Smith LM | Nature methods | 33106676 | Nat Methods | 2020 Nov | https://www.ncbi.nlm.nih.gov/pubmed/33106676 |
| Methods Matter: Standard Production Platforms for Recombinant AAV Produce Chemically and Functionally Distinct Vectors. | Rumachik NG, Malaker SA, Poweleit N, Maynard LH, Adams CM, Leib RD, Cirolia G, Thomas D, Stamnes S, Holt K, Sinn P, May AP, Paulk NK | Molecular therapy. Methods & clinical development | 32995354 | Mol Ther Methods Clin Dev | 2020 Sep 11 | https://www.ncbi.nlm.nih.gov/pubmed/32995354 |
| Development of IsoTaG, a Chemical Glycoproteomics Technique for Profiling Intact N- and O-Glycopeptides from Whole Cell Proteomes. | Woo CM, Felix A, Byrd WE, Zuegel DK, Ishihara M, Azadi P, Iavarone AT, Pitteri SJ, Bertozzi CR | Journal of proteome research | 28244757 | J Proteome Res | 2017 Apr 7 | https://www.ncbi.nlm.nih.gov/pubmed/28244757 |
| A Novel Germline Variant in CSF3R Reduces N-Glycosylation and Exerts Potent Oncogenic Effects in Leukemia. | Spiciarich DR, Oh ST, Foley A, Hughes SB, Mauro MJ, Abdel-Wahab O, Press RD, Viner R, Thompson SL, Chen Q, Azadi P, Bertozzi CR, Maxson JE | Cancer research | 30348809 | Cancer Res | 2018 Dec 15 | https://www.ncbi.nlm.nih.gov/pubmed/30348809 |
| Optimal Dissociation Methods Differ for N- and O-Glycopeptides. | Riley NM, Malaker SA, Driessen MD, Bertozzi CR | Journal of proteome research | 32500713 | J Proteome Res | 2020 Aug 7 | https://www.ncbi.nlm.nih.gov/pubmed/32500713 |
| Lineage Plasticity in SCLC Generates Non-Neuroendocrine Cells Primed for Vasculogenic Mimicry. | Pearsall SM, Williamson SC, Humphrey S, Hughes E, Morgan D, García Marqués FJ, Awanis G, Carroll R, Burks L, Shue YT, Bermudez A, Frese KK, Galvin M, Carter M, Priest L, Kerr A, Zhou C, Oliver TG, Humphries JD, Humphries MJ, Blackhall F, Cannell IG, Pitteri SJ, Hannon GJ, Sage J, Dive C, Simpson KL | Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer | 37455012 | J Thorac Oncol | 2023 Oct | https://www.ncbi.nlm.nih.gov/pubmed/37455012 |
| Crystal structure of an anti-idiotype variable lymphocyte receptor. | Collins BC, Nakahara H, Acharya S, Cooper MD, Herrin BR, Wilson IA | Acta crystallographica. Section F, Structural biology communications | 29199989 | Acta Crystallogr F Struct Biol Commun | 2017 Dec 1 | https://www.ncbi.nlm.nih.gov/pubmed/29199989 |
| Identification of Glycan-Specific Variable Lymphocyte Receptors Using Yeast Surface Display and Glycan Microarrays. | McKitrick TR, Hanes MS, Rosenberg CS, Heimburg-Molinaro J, Cooper MD, Herrin BR, Cummings RD | Methods in molecular biology (Clifton, N.J.) | 34870812 | Methods Mol Biol | 2022 | https://www.ncbi.nlm.nih.gov/pubmed/34870812 |
| Development of smart anti-glycan reagents using immunized lampreys. | McKitrick TR, Goth CK, Rosenberg CS, Nakahara H, Heimburg-Molinaro J, McQuillan AM, Falco R, Rivers NJ, Herrin BR, Cooper MD, Cummings RD | Communications biology | 32111965 | Commun Biol | 2020 Feb 28 | https://www.ncbi.nlm.nih.gov/pubmed/32111965 |
| Development of lamprey-derived antibodies against human blood group antigens. | Kunz PB, Tulin EKC, Mehta AY, Jia T, Heimburg-Molinaro J, Otto VI, Stowell SR, Cummings RD | Glycobiology | 40796252 | Glycobiology | 2025 Nov 6 | https://www.ncbi.nlm.nih.gov/pubmed/40796252 |
| VLR Recognition of TLR5 Expands the Molecular Characterization of Protein Antigen Binding by Non-Ig-based Antibodies. | Gunn RJ, Herrin BR, Acharya S, Cooper MD, Wilson IA | Journal of molecular biology | 29596914 | J Mol Biol | 2018 Apr 27 | https://www.ncbi.nlm.nih.gov/pubmed/29596914 |
| Novel lamprey antibody recognizes terminal sulfated galactose epitopes on mammalian glycoproteins. | McKitrick TR, Bernard SM, Noll AJ, Collins BC, Goth CK, McQuillan AM, Heimburg-Molinaro J, Herrin BR, Wilson IA, Cooper MD, Cummings RD | Communications biology | 34083726 | Commun Biol | 2021 Jun 3 | https://www.ncbi.nlm.nih.gov/pubmed/34083726 |
| Blood group O expression in normal tissues and tumors. | Tulin EKC, Muerner L, McKitrick TR, Tilton CA, Pepi LE, Jia T, Noel M, Zheng LY, Stowell SR, von Gunten S, Heimburg-Molinaro J, Cummings RD | The FEBS journal | 40589148 | FEBS J | 2025 Nov | https://www.ncbi.nlm.nih.gov/pubmed/40589148 |
| Thyroid Carcinoma Glycoproteins Express Altered N-Glycans with 3-O-Sulfated Galactose Residues. | Broekhuis JM, Lu D, Aryal RP, Matsumoto Y, Pepi LE, Chaves N, Gomez-Mayorga JL, James BC, Cummings RD | Biomolecules | 39766189 | Biomolecules | 2024 Nov 21 | https://www.ncbi.nlm.nih.gov/pubmed/39766189 |
| Antibodies from Lampreys as Smart Anti-Glycan Reagents (SAGRs): Perspectives on Their Specificity, Structure, and Glyco-genomics. | McKitrick TR, Eris D, Mondal N, Aryal RP, McCurley N, Heimburg-Molinaro J, Cummings RD | Biochemistry | 32052624 | Biochemistry | 2020 Sep 1 | https://www.ncbi.nlm.nih.gov/pubmed/32052624 |
| Structural Insights into VLR Fine Specificity for Blood Group Carbohydrates. | Collins BC, Gunn RJ, McKitrick TR, Cummings RD, Cooper MD, Herrin BR, Wilson IA | Structure (London, England : 1993) | 28988747 | Structure | 2017 Nov 7 | https://www.ncbi.nlm.nih.gov/pubmed/28988747 |
| Symbol Nomenclature for Graphical Representations of Glycans. | Varki A, Cummings RD, Aebi M, Packer NH, Seeberger PH, Esko JD, Stanley P, Hart G, Darvill A, Kinoshita T, Prestegard JJ, Schnaar RL, Freeze HH, Marth JD, Bertozzi CR, Etzler ME, Frank M, Vliegenthart JF, Lütteke T, Perez S, Bolton E, Rudd P, Paulson J, Kanehisa M, Toukach P, Aoki-Kinoshita KF, Dell A, Narimatsu H, York W, Taniguchi N, Kornfeld S | Glycobiology | 26543186 | Glycobiology | 2015 Dec | https://www.ncbi.nlm.nih.gov/pubmed/26543186 |
| Novel aspects of sialoglycan recognition by the Siglec-like domains of streptococcal SRR glycoproteins. | Bensing BA, Khedri Z, Deng L, Yu H, Prakobphol A, Fisher SJ, Chen X, Iverson TM, Varki A, Sullam PM | Glycobiology | 27037304 | Glycobiology | 2016 Nov | https://www.ncbi.nlm.nih.gov/pubmed/27037304 |
| The role of 9-O-acetylated glycan receptor moieties in the typhoid toxin binding and intoxication. | Nguyen T, Lee S, Yang YA, Ahn C, Sim JH, Kei TG, Barnard KN, Yu H, Millano SK, Chen X, Parrish CR, Song J | PLoS pathogens | 32084237 | PLoS Pathog | 2020 Feb | https://www.ncbi.nlm.nih.gov/pubmed/32084237 |
| Complexity and Diversity of the Mammalian Sialome Revealed by Nidovirus Virolectins. | Langereis MA, Bakkers MJ, Deng L, Padler-Karavani V, Vervoort SJ, Hulswit RJ, van Vliet AL, Gerwig GJ, de Poot SA, Boot W, van Ederen AM, Heesters BA, van der Loos CM, van Kuppeveld FJ, Yu H, Huizinga EG, Chen X, Varki A, Kamerling JP, de Groot RJ | Cell reports | 26095364 | Cell Rep | 2015 Jun 30 | https://www.ncbi.nlm.nih.gov/pubmed/26095364 |
| Effective one-pot multienzyme (OPME) synthesis of monotreme milk oligosaccharides and other sialosides containing 4-O-acetyl sialic acid. | Yu H, Zeng J, Li Y, Thon V, Shi B, Chen X | Organic & biomolecular chemistry | 27548611 | Org Biomol Chem | 2016 Sep 28 | https://www.ncbi.nlm.nih.gov/pubmed/27548611 |
| Expression of 9-O- and 7,9-O-Acetyl Modified Sialic Acid in Cells and Their Effects on Influenza Viruses. | Barnard KN, Wasik BR, LaClair JR, Buchholz DW, Weichert WS, Alford-Lawrence BK, Aguilar HC, Parrish CR | mBio | 31796537 | mBio | 2019 Dec 3 | https://www.ncbi.nlm.nih.gov/pubmed/31796537 |
| An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism. | Song H, Qi J, Khedri Z, Diaz S, Yu H, Chen X, Varki A, Shi Y, Gao GF | PLoS pathogens | 26816272 | PLoS Pathog | 2016 Jan | https://www.ncbi.nlm.nih.gov/pubmed/26816272 |
| Effects of Sialic Acid Modifications on Virus Binding and Infection. | Wasik BR, Barnard KN, Parrish CR | Trends in microbiology | 27491885 | Trends Microbiol | 2016 Dec | https://www.ncbi.nlm.nih.gov/pubmed/27491885 |
| Biological roles of glycans. | Varki A | Glycobiology | 27558841 | Glycobiology | 2017 Jan | https://www.ncbi.nlm.nih.gov/pubmed/27558841 |
| Distribution of O-Acetylated Sialic Acids among Target Host Tissues for Influenza Virus. | Wasik BR, Barnard KN, Ossiboff RJ, Khedri Z, Feng KH, Yu H, Chen X, Perez DR, Varki A, Parrish CR | mSphere | 28904995 | mSphere | 2017 Sep-Oct | https://www.ncbi.nlm.nih.gov/pubmed/28904995 |
| Pre-B acute lymphoblastic leukemia expresses cell surface nucleolin as a 9-O-acetylated sialoglycoprotein. | Joo EJ, Wasik BR, Parrish C, Paz H, Mϋhlenhoff M, Abdel-Azim H, Groffen J, Heisterkamp N | Scientific reports | 30464179 | Sci Rep | 2018 Nov 21 | https://www.ncbi.nlm.nih.gov/pubmed/30464179 |
| Development and applications of sialoglycan-recognizing probes (SGRPs) with defined specificities: exploring the dynamic mammalian sialoglycome. | Srivastava S, Verhagen A, Sasmal A, Wasik BR, Diaz S, Yu H, Bensing BA, Khan N, Khedri Z, Secrest P, Sullam P, Varki N, Chen X, Parrish CR, Varki A | Glycobiology | 35926090 | Glycobiology | 2022 Nov 22 | https://www.ncbi.nlm.nih.gov/pubmed/35926090 |
| Glycosaminoglycans from fish swim bladder: isolation, structural characterization and bioactive potential. | Pan Y, Wang P, Zhang F, Yu Y, Zhang X, Lin L, Linhardt RJ | Glycoconjugate journal | 29124565 | Glycoconj J | 2018 Feb | https://www.ncbi.nlm.nih.gov/pubmed/29124565 |
| Polymorphic factor H-binding activity of CspA protects Lyme borreliae from the host complement in feeding ticks to facilitate tick-to-host transmission. | Hart T, Nguyen NTT, Nowak NA, Zhang F, Linhardt RJ, Diuk-Wasser M, Ram S, Kraiczy P, Lin YP | PLoS pathogens | 29813137 | PLoS Pathog | 2018 May | https://www.ncbi.nlm.nih.gov/pubmed/29813137 |
| Analysis of heparin oligosaccharides by capillary electrophoresis-negative-ion electrospray ionization mass spectrometry. | Lin L, Liu X, Zhang F, Chi L, Amster IJ, Leach FE 3rd, Xia Q, Linhardt RJ | Analytical and bioanalytical chemistry | 27325464 | Anal Bioanal Chem | 2017 Jan | https://www.ncbi.nlm.nih.gov/pubmed/27325464 |
| Negative Electron Transfer Dissociation Sequencing of Increasingly Sulfated Glycosaminoglycan Oligosaccharides on an Orbitrap Mass Spectrometer. | Leach FE 3rd, Riley NM, Westphall MS, Coon JJ, Amster IJ | Journal of the American Society for Mass Spectrometry | 28589488 | J Am Soc Mass Spectrom | 2017 Sep | https://www.ncbi.nlm.nih.gov/pubmed/28589488 |
| Construction and functional characterization of truncated versions of recombinant keratanase II from Bacillus circulans. | Wang H, He W, Jiang P, Yu Y, Lin L, Sun X, Koffas M, Zhang F, Linhardt RJ | Glycoconjugate journal | 28752383 | Glycoconj J | 2017 Oct | https://www.ncbi.nlm.nih.gov/pubmed/28752383 |
| Sequencing the Dermatan Sulfate Chain of Decorin. | Yu Y, Duan J, Leach FE 3rd, Toida T, Higashi K, Zhang H, Zhang F, Amster IJ, Linhardt RJ | Journal of the American Chemical Society | 29111696 | J Am Chem Soc | 2017 Nov 22 | https://www.ncbi.nlm.nih.gov/pubmed/29111696 |
| Glycosaminoglycans from bovine eye vitreous humour and interaction with collagen type II. | Peng Y, Yu Y, Lin L, Liu X, Zhang X, Wang P, Hoffman P, Kim SY, Zhang F, Linhardt RJ | Glycoconjugate journal | 29305777 | Glycoconj J | 2018 Feb | https://www.ncbi.nlm.nih.gov/pubmed/29305777 |
| Borrelia burgdorferi glycosaminoglycan-binding proteins: a potential target for new therapeutics against Lyme disease. | Lin YP, Li L, Zhang F, Linhardt RJ | Microbiology (Reading, England) | 29116038 | Microbiology (Reading) | 2017 Dec | https://www.ncbi.nlm.nih.gov/pubmed/29116038 |
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| Aptamer-field-effect transistors overcome Debye length limitations for small-molecule sensing. | Nakatsuka N, Yang KA, Abendroth JM, Cheung KM, Xu X, Yang H, Zhao C, Zhu B, Rim YS, Yang Y, Weiss PS, Stojanović MN, Andrews AM | Science (New York, N.Y.) | 30190311 | Science | 2018 Oct 19 | https://www.ncbi.nlm.nih.gov/pubmed/30190311 |
| Integrated Microfluidic Isolation of Aptamers Using Electrophoretic Oligonucleotide Manipulation. | Kim J, Olsen TR, Zhu J, Hilton JP, Yang KA, Pei R, Stojanovic MN, Lin Q | Scientific reports | 27217242 | Sci Rep | 2016 May 24 | https://www.ncbi.nlm.nih.gov/pubmed/27217242 |
| Unraveling the isomeric heterogeneity of glycans: ion mobility separations in structures for lossless ion manipulations. | Nagy G , Attah IK , Garimella SVB , Tang K , Ibrahim YM , Baker ES , Smith RD | Chemical communications (Cambridge, England) | 30264832 | Chem Commun (Camb) | 2018 Oct 25 | https://www.ncbi.nlm.nih.gov/pubmed/30264832 |
| Capillary Electrophoresis-Nanoelectrospray Ionization-Selected Reaction Monitoring Mass Spectrometry via a True Sheathless Metal-Coated Emitter Interface for Robust and High-Sensitivity Sample Quantification. | Guo X, Fillmore TL, Gao Y, Tang K | Analytical chemistry | 27028594 | Anal Chem | 2016 Apr 19 | https://www.ncbi.nlm.nih.gov/pubmed/27028594 |
| Enhancing glycan isomer separations with metal ions and positive and negative polarity ion mobility spectrometry-mass spectrometry analyses. | Zheng X, Zhang X, Schocker NS, Renslow RS, Orton DJ, Khamsi J, Ashmus RA, Almeida IC, Tang K, Costello CE, Smith RD, Michael K, Baker ES | Analytical and bioanalytical chemistry | 27604268 | Anal Bioanal Chem | 2017 Jan | https://www.ncbi.nlm.nih.gov/pubmed/27604268 |
| Following sugar patterns in search of galectin function. | Godula K | Proceedings of the National Academy of Sciences of the United States of America | 29496962 | Proc Natl Acad Sci U S A | 2018 Mar 13 | https://www.ncbi.nlm.nih.gov/pubmed/29496962 |
| Engineering of spectator glycocalyx structures to evaluate molecular interactions at crowded cellular boundaries. | Honigfort DJ, Zhang MH, Verespy S, Godula K | Faraday discussions | 31313786 | Faraday Discuss | 2019 Oct 30 | https://www.ncbi.nlm.nih.gov/pubmed/31313786 |
| GIV/Girdin, a non-receptor modulator for Gαi/s, regulates spatiotemporal signaling during sperm capacitation and is required for male fertility. | Reynoso S, Castillo V, Katkar GD, Lopez-Sanchez I, Taheri S, Espinoza C, Rohena C, Sahoo D, Gagneux P, Ghosh P | eLife | 34409938 | Elife | 2021 Aug 19 | https://www.ncbi.nlm.nih.gov/pubmed/34409938 |
| Glycocalyx Scaffolding to Control Cell Surface Glycan Displays. | Huang ML, Tota EM, Verespy S 3rd, Godula K | Current protocols in chemical biology | 29927116 | Curr Protoc Chem Biol | 2018 Jun | https://www.ncbi.nlm.nih.gov/pubmed/29927116 |
| Mucin-mimetic glycan arrays integrating machine learning for analyzing receptor pattern recognition by influenza A viruses. | Lucas TM, Gupta C, Altman MO, Sanchez E, Naticchia MR, Gagneux P, Singharoy A, Godula K | Chem | 34993358 | Chem | 2021 Dec 9 | https://www.ncbi.nlm.nih.gov/pubmed/34993358 |
| Glycocalyx scaffolding with synthetic nanoscale glycomaterials. | Huang ML, Purcell SC, Verespy S III, Wang Y, Godula K | Biomaterials science | 28616946 | Biomater Sci | 2017 Jul 25 | https://www.ncbi.nlm.nih.gov/pubmed/28616946 |
| Glycocalyx crowding with mucin mimetics strengthens binding of soluble and virus-associated lectins to host cell glycan receptors. | Honigfort DJ, Altman MO, Gagneux P, Godula K | Proceedings of the National Academy of Sciences of the United States of America | 34583992 | Proc Natl Acad Sci U S A | 2021 Oct 5 | https://www.ncbi.nlm.nih.gov/pubmed/34583992 |
| α-Galactosidase A-deficient rats accumulate glycosphingolipids and develop cardiorenal phenotypes of Fabry disease. | Miller JJ, Aoki K, Mascari CA, Beltrame AK, Sokumbi O, North PE, Tiemeyer M, Kriegel AJ, Dahms NM | FASEB journal : official publication of the Federation of American Societies for Experimental Biology | 29979634 | FASEB J | 2019 Jan | https://www.ncbi.nlm.nih.gov/pubmed/29979634 |
| DANGO: An MS data annotation tool for glycolipidomics. | Matsubara M, Ishihara M, Tiemeyer M, Aoki K, Ranzinger R | BBA advances | 40485743 | BBA Adv | 2025 | https://www.ncbi.nlm.nih.gov/pubmed/40485743 |
| A Recurrent De Novo Heterozygous COG4 Substitution Leads to Saul-Wilson Syndrome, Disrupted Vesicular Trafficking, and Altered Proteoglycan Glycosylation. | Ferreira CR, Xia ZJ, Clément A, Parry DA, Davids M, Taylan F, Sharma P, Turgeon CT, Blanco-Sánchez B, Ng BG, Logan CV, Wolfe LA, Solomon BD, Cho MT, Douglas G, Carvalho DR, Bratke H, Haug MG, Phillips JB, Wegner J, Tiemeyer M, Aoki K, Undiagnosed Diseases Network, Scottish Genome Partnership, Nordgren A, Hammarsjö A, Duker AL, Rohena L, Hove HB, Ek J, Adams D, Tifft CJ, Onyekweli T, Weixel T, Macnamara E, Radtke K, Powis Z, Earl D, Gabriel M, Russi AHS, Brick L, Kozenko M, Tham E, Raymond KM, Phillips JA 3rd, Tiller GE, Wilson WG, Hamid R, Malicdan MCV, Nishimura G, Grigelioniene G, Jackson A, Westerfield M, Bober MB, Gahl WA, Freeze HH | American journal of human genetics | 30290151 | Am J Hum Genet | 2018 Oct 4 | https://www.ncbi.nlm.nih.gov/pubmed/30290151 |
| Sialylated keratan sulfate proteoglycans are Siglec-8 ligands in human airways. | Gonzalez-Gil A, Porell RN, Fernandes SM, Wei Y, Yu H, Carroll DJ, McBride R, Paulson JC, Tiemeyer M, Aoki K, Bochner BS, Schnaar RL | Glycobiology | 29924315 | Glycobiology | 2018 Oct 1 | https://www.ncbi.nlm.nih.gov/pubmed/29924315 |
| Neuropathic pain in a Fabry disease rat model. | Miller JJ, Aoki K, Moehring F, Murphy CA, O'Hara CL, Tiemeyer M, Stucky CL, Dahms NM | JCI insight | 29563343 | JCI Insight | 2018 Mar 22 | https://www.ncbi.nlm.nih.gov/pubmed/29563343 |
| Airway glycomic and allergic inflammatory consequences resulting from keratan sulfate galactose 6-O-sulfotransferase (CHST1) deficiency. | Kumagai T, Kiwamoto T, Brummet ME, Wu F, Aoki K, Zhu Z, Bochner BS, Tiemeyer M | Glycobiology | 29659839 | Glycobiology | 2018 Jun 1 | https://www.ncbi.nlm.nih.gov/pubmed/29659839 |
| Sulfated Lewis A trisaccharide on oviduct membrane glycoproteins binds bovine sperm and lengthens sperm lifespan. | Dutta S, Aoki K, Doungkamchan K, Tiemeyer M, Bovin N, Miller DJ | The Journal of biological chemistry | 31337705 | J Biol Chem | 2019 Sep 6 | https://www.ncbi.nlm.nih.gov/pubmed/31337705 |
| Recessive GM3 synthase deficiency: Natural history, biochemistry, and therapeutic frontier. | Bowser LE, Young M, Wenger OK, Ammous Z, Brigatti KW, Carson VJ, Moser T, Deline J, Aoki K, Morlet T, Scott EM, Puffenberger EG, Robinson DL, Hendrickson C, Salvin J, Gottlieb S, Heaps AD, Tiemeyer M, Strauss KA | Molecular genetics and metabolism | 30691927 | Mol Genet Metab | 2019 Apr | https://www.ncbi.nlm.nih.gov/pubmed/30691927 |
| Rats deficient in α-galactosidase A develop ocular manifestations of Fabry disease. | Miller JJ, Aoki K, Reid CA, Tiemeyer M, Dahms NM, Kassem IS | Scientific reports | 31253878 | Sci Rep | 2019 Jun 28 | https://www.ncbi.nlm.nih.gov/pubmed/31253878 |
| Global mapping of glycosylation pathways in human-derived cells. | Huang YF, Aoki K, Akase S, Ishihara M, Liu YS, Yang G, Kizuka Y, Mizumoto S, Tiemeyer M, Gao XD, Aoki-Kinoshita KF, Fujita M | Developmental cell | 33730547 | Dev Cell | 2021 Apr 19 | https://www.ncbi.nlm.nih.gov/pubmed/33730547 |
| Platelet and myeloid cell phenotypes in a rat model of Fabry disease. | Kanack AJ, Aoki K, Tiemeyer M, Dahms NM | FASEB journal : official publication of the Federation of American Societies for Experimental Biology | 34320241 | FASEB J | 2021 Aug | https://www.ncbi.nlm.nih.gov/pubmed/34320241 |
| Glucuronylated core 1 glycans are required for precise localization of neuromuscular junctions and normal formation of basement membranes on Drosophila muscles. | Itoh K, Akimoto Y, Kondo S, Ichimiya T, Aoki K, Tiemeyer M, Nishihara S | Developmental biology | 29499182 | Dev Biol | 2018 Apr 15 | https://www.ncbi.nlm.nih.gov/pubmed/29499182 |
| Mining High-Complexity Motifs in Glycans: A New Language To Uncover the Fine Specificities of Lectins and Glycosidases. | Klamer Z, Staal B, Prudden AR, Liu L, Smith DF, Boons GJ, Haab B | Analytical chemistry | 29058413 | Anal Chem | 2017 Nov 21 | https://www.ncbi.nlm.nih.gov/pubmed/29058413 |
| Characterizing Protein Glycosylation through On-Chip Glycan Modification and Probing. | Reatini BS, Ensink E, Liau B, Sinha JY, Powers TW, Partyka K, Bern M, Brand RE, Rudd PM, Kletter D, Drake R, Haab BB | Analytical chemistry | 27809484 | Anal Chem | 2016 Dec 6 | https://www.ncbi.nlm.nih.gov/pubmed/27809484 |
| Deciphering Protein Glycosylation by Computational Integration of On-chip Profiling, Glycan-array Data, and Mass Spectrometry. | Klamer Z, Hsueh P, Ayala-Talavera D, Haab B | Molecular & cellular proteomics : MCP | 30257876 | Mol Cell Proteomics | 2019 Jan | https://www.ncbi.nlm.nih.gov/pubmed/30257876 |
| Automated Identification and Quantification of Signals in Multichannel Immunofluorescence Images: The SignalFinder-IF Platform. | Barnett D, Hall J, Haab B | The American journal of pathology | 31026417 | Am J Pathol | 2019 Jul | https://www.ncbi.nlm.nih.gov/pubmed/31026417 |
| T cells control the generation of nanomolar-affinity anti-glycan antibodies. | Polonskaya Z, Deng S, Sarkar A, Kain L, Comellas-Aragones M, McKay CS, Kaczanowska K, Holt M, McBride R, Palomo V, Self KM, Taylor S, Irimia A, Mehta SR, Dan JM, Brigger M, Crotty S, Schoenberger SP, Paulson JC, Wilson IA, Savage PB, Finn MG, Teyton L | The Journal of clinical investigation | 28287405 | J Clin Invest | 2017 Apr 3 | https://www.ncbi.nlm.nih.gov/pubmed/28287405 |
| New Directions for Natural Killer T Cells in the Immunotherapy of Cancer. | Teyton L | Frontiers in immunology | 29209309 | Front Immunol | 2017 | https://www.ncbi.nlm.nih.gov/pubmed/29209309 |
| Rapid, Selection-Free, High-Efficiency Genome Editing in Protozoan Parasites Using CRISPR-Cas9 Ribonucleoproteins. | Soares Medeiros LC, South L, Peng D, Bustamante JM, Wang W, Bunkofske M, Perumal N, Sanchez-Valdez F, Tarleton RL | mBio | 29114029 | mBio | 2017 Nov 7 | https://www.ncbi.nlm.nih.gov/pubmed/29114029 |
| Separation and Identification of Permethylated Glycan Isomers by Reversed Phase NanoLC-NSI-MS(n). | Kurz S, Sheikh MO, Lu S, Wells L, Tiemeyer M | Molecular & cellular proteomics : MCP | 33376194 | Mol Cell Proteomics | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/33376194 |
| Glycomics, Glycoproteomics, and Glycogenomics: An Inter-Taxa Evolutionary Perspective. | West CM, Malzl D, Hykollari A, Wilson IBH | Molecular & cellular proteomics : MCP | 32994314 | Mol Cell Proteomics | 2021 | https://www.ncbi.nlm.nih.gov/pubmed/32994314 |
| CRISPR/Cas9 and glycomics tools for Toxoplasma glycobiology. | Gas-Pascual E, Ichikawa HT, Sheikh MO, Serji MI, Deng B, Mandalasi M, Bandini G, Samuelson J, Wells L, West CM | The Journal of biological chemistry | 30463938 | J Biol Chem | 2019 Jan 25 | https://www.ncbi.nlm.nih.gov/pubmed/30463938 |
| Nucleocytoplasmic O-glycosylation in protists. | West CM, Kim HW | Current opinion in structural biology | 31128470 | Curr Opin Struct Biol | 2019 Jun | https://www.ncbi.nlm.nih.gov/pubmed/31128470 |
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| The nucleocytosolic O-fucosyltransferase SPINDLY affects protein expression and virulence in Toxoplasma gondii. | Bandini G, Agop-Nersesian C, van der Wel H, Mandalasi M, Kim HW, West CM, Samuelson J | The Journal of biological chemistry | 33158988 | J Biol Chem | 2021 Jan-Jun | https://www.ncbi.nlm.nih.gov/pubmed/33158988 |
| Glycocalyx-Driven Immunomodulation in Trypanosoma cruzi: Structures, Host Responses, Diagnostic and Therapeutic Targeting. | Heise N, West CM, Koeller CM | Parasite immunology | 42429568 | Parasite Immunol | 2026 Jul | https://www.ncbi.nlm.nih.gov/pubmed/42429568 |
| Rapid screening of sugar-nucleotide donor specificities of putative glycosyltransferases. | Sheikh MO, Halmo SM, Patel S, Middleton D, Takeuchi H, Schafer CM, West CM, Haltiwanger RS, Avci FY, Moremen KW, Wells L | Glycobiology | 28177478 | Glycobiology | 2017 Mar 1 | https://www.ncbi.nlm.nih.gov/pubmed/28177478 |
| The GPI sidechain of Toxoplasma gondii inhibits parasite pathogenesis. | Alvarez JA, Gas-Pascual E, Malhi S, Sánchez-Arcila JC, Njume FN, van der Wel H, Zhao Y, García-López L, Ceron G, Posada J, Souza SP, Yap GS, West CM, Jensen KDC | mBio | 39302131 | mBio | 2024 Oct 16 | https://www.ncbi.nlm.nih.gov/pubmed/39302131 |
| Mass Defect-Based Dimethyl Pyrimidinyl Ornithine (DiPyrO) Tags for Multiplex Quantitative Proteomics. | Frost DC, Buchberger AR, Li L | Analytical chemistry | 28795795 | Anal Chem | 2017 Oct 17 | https://www.ncbi.nlm.nih.gov/pubmed/28795795 |
| Targeted Mass Spectrometry Approach Enabled Discovery of O-Glycosylated Insulin and Related Signaling Peptides in Mouse and Human Pancreatic Islets. | Yu Q, Canales A, Glover MS, Das R, Shi X, Liu Y, Keller MP, Attie AD, Li L | Analytical chemistry | 28726377 | Anal Chem | 2017 Sep 5 | https://www.ncbi.nlm.nih.gov/pubmed/28726377 |
| Increased N,N-Dimethyl Leucine Isobaric Tag Multiplexing by a Combined Precursor Isotopic Labeling and Isobaric Tagging Approach. | Frost DC, Rust CJ, Robinson RAS, Li L | Analytical chemistry | 30095893 | Anal Chem | 2018 Sep 18 | https://www.ncbi.nlm.nih.gov/pubmed/30095893 |
| Quantitative Glycomic Analysis by Mass-Defect-Based Dimethyl Pyrimidinyl Ornithine (DiPyrO) Tags and High-Resolution Mass Spectrometry. | Chen B, Feng Y, Frost DC, Zhong X, Buchberger AR, Johnson J, Xu M, Kim M, Puccetti D, Diamond C, Ikonomidou C, Li L | Analytical chemistry | 29779369 | Anal Chem | 2018 Jul 3 | https://www.ncbi.nlm.nih.gov/pubmed/29779369 |
| Site-specific characterization and quantitation of N-glycopeptides in PKM2 knockout breast cancer cells using DiLeu isobaric tags enabled by electron-transfer/higher-energy collision dissociation (EThcD). | Chen Z , Yu Q , Hao L , Liu F , Johnson J , Tian Z , Kao WJ , Xu W , Li L | The Analyst | 29687791 | Analyst | 2018 May 29 | https://www.ncbi.nlm.nih.gov/pubmed/29687791 |
| Targeted MultiNotch MS(3) Approach for Relative Quantification of N-Glycans Using Multiplexed Carbonyl-Reactive Isobaric Tags. | Chen B, Zhong X, Feng Y, Snovida S, Xu M, Rogers J, Li L | Analytical chemistry | 29182308 | Anal Chem | 2018 Jan 16 | https://www.ncbi.nlm.nih.gov/pubmed/29182308 |
| Development of a hydrophilic interaction liquid chromatography coupled with matrix-assisted laser desorption/ionization-mass spectrometric imaging platform for N-glycan relative quantitation using stable-isotope labeled hydrazide reagents. | Chen Z, Zhong X, Tie C, Chen B, Zhang X, Li L | Analytical and bioanalytical chemistry | 28540462 | Anal Bioanal Chem | 2017 Jul | https://www.ncbi.nlm.nih.gov/pubmed/28540462 |
| Electron-Transfer/Higher-Energy Collision Dissociation (EThcD)-Enabled Intact Glycopeptide/Glycoproteome Characterization. | Yu Q, Wang B, Chen Z, Urabe G, Glover MS, Shi X, Guo LW, Kent KC, Li L | Journal of the American Society for Mass Spectrometry | 28695533 | J Am Soc Mass Spectrom | 2017 Sep | https://www.ncbi.nlm.nih.gov/pubmed/28695533 |
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