NIH Director's New Innovator (NIA)
NIH Director's New Innovator (NIA)
Program Publications
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The search results on this publication page are automated on a monthly schedule based on acknowledgement of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.
| Title | Authors | Journal | PubMedID | Publication Date |
|---|---|---|---|---|
| Rapid, antibiotic incubation-free determination of tuberculosis drug resistance using machine learning and Raman spectroscopy. | Ogunlade, Babatunde; Tadesse, Loza F; Li, Hongquan; Vu, Nhat; Banaei, Niaz; Barczak, Amy K; Saleh, Amr A E; Prakash, Manu; Dionne, Jennifer A | ArXiv | 37332564 | 2024 Apr 09 |
| Multifunctional microelectronic fibers enable wireless modulation of gut and brain neural circuits. | Sahasrabudhe, Atharva; Rupprecht, Laura E; Orguc, Sirma; Khudiyev, Tural; Tanaka, Tomo; Sands, Joanna; Zhu, Weikun; Tabet, Anthony; Manthey, Marie; Allen, Harrison; Loke, Gabriel; Antonini, Marc-Joseph; Rosenfeld, Dekel; Park, Jimin; Garwood, Indie C; Yan, Wei; Niroui, Farnaz; Fink, Yoel; Chandrakasan, Anantha; Bohórquez, Diego V; Anikeeva, Polina | Nature biotechnology | 37349522 | 2024 Jun |
| Joint single-cell profiling resolves 5mC and 5hmC and reveals their distinct gene regulatory effects. | Fabyanic, Emily B; Hu, Peng; Qiu, Qi; Berríos, Kiara N; Connolly, Daniel R; Wang, Tong; Flournoy, Jennifer; Zhou, Zhaolan; Kohli, Rahul M; Wu, Hao | Nature biotechnology | 37640946 | 2024 Jun |
| Targeted DNA integration in human cells without double-strand breaks using CRISPR-associated transposases. | Lampe, George D; King, Rebeca T; Halpin-Healy, Tyler S; Klompe, Sanne E; Hogan, Marcus I; Vo, Phuc Leo H; Tang, Stephen; Chavez, Alejandro; Sternberg, Samuel H | Nature biotechnology | 36991112 | 2024 Jan |
| Inflammation Resolution in the Cardiovascular System: Arterial Hypertension, Atherosclerosis, and Ischemic Heart Disease. | Gonzalez, Azuah L; Dungan, Matthew M; Smart, C Duncan; Madhur, Meena S; Doran, Amanda C | Antioxidants & redox signaling | 37125445 | 2024 Feb |
| Socioeconomic disadvantage and high-effort coping in childhood: evidence of skin-deep resilience. | Ehrlich, Katherine B; Lyle, Sarah M; Corallo, Kelsey L; Brisson, Julie M; Wiggins, Elizabeth R; Yu, Tianyi; Chen, Edith; Miller, Gregory E; Brody, Gene H | Journal of child psychology and psychiatry, and allied disciplines | 37246563 | 2024 Mar |
| Neural activity ramps in frontal cortex signal extended motivation during learning. | Regalado, Josue M; Asensio, Ariadna Corredera; Haunold, Theresa; Toader, Andrew C; Li, Yan Ran; Neal, Lauren A; Rajasethupathy, Priya | bioRxiv : the preprint server for biology | 37905153 | 2024 Apr 20 |
| Gene-based association study of rare variants in children of diverse ancestries implicates TNFRSF21 in the development of allergic asthma. | Clay, Selene; Alladina, Jehan; Smith, Neal P; Visness, Cynthia M; Wood, Robert A; O'Connor, George T; Cohen, Robyn T; Khurana Hershey, Gurjit K; Kercsmar, Carolyn M; Gruchalla, Rebecca S; Gill, Michelle A; Liu, Andrew H; Kim, Haejin; Kattan, Meyer; Bacharier, Leonard B; Rastogi, Deepa; Rivera-Spoljaric, Katherine; Robison, Rachel G; Gergen, Peter J; Busse, William W; Villani, Alexandra-Chloe; Cho, Josalyn L; Medoff, Benjamin D; Gern, James E; Jackson, Daniel J; Ober, Carole; Dapas, Matthew | The Journal of allergy and clinical immunology | 37944567 | 2024 Mar |
| Quantification of influenza virus mini viral RNA dynamics using Cas13. | Lamb, Caitlin H; Pitré, Emmanuelle M; Elshina, Elizaveta; Rigby, Charlotte V; Bisht, Karishma; Oade, Michael S; Jalal, Hamid; Myhrvold, Cameron; Te Velthuis, Aartjan J W | bioRxiv : the preprint server for biology | 37961440 | 2024 May 02 |
| Communicating scientific uncertainty in the early stages of the COVID-19 pandemic: A message experiment. | Adams, Dallin R; Ratcliff, Chelsea L; Pokharel, Manusheela; Jensen, Jakob D; Liao, Yi | Risk analysis : an official publication of the Society for Risk Analysis | 37963681 | 2024 Jul |
| A parametrized two-domain thermodynamic model explains diverse mutational effects on protein allostery. | Liu, Zhuang; Gillis, Thomas; Raman, Srivatsan; Cui, Qiang | bioRxiv : the preprint server for biology | 37662419 | 2024 Feb 14 |
| Reversions mask the contribution of adaptive evolution in microbiomes. | Torrillo, Paul A; Lieberman, Tami D | bioRxiv : the preprint server for biology | 37745437 | 2024 Jun 18 |
| Dissecting key regulators of transcriptome kinetics through scalable single-cell RNA profiling of pooled CRISPR screens. | Xu, Zihan; Sziraki, Andras; Lee, Jasper; Zhou, Wei; Cao, Junyue | Nature biotechnology | 37749268 | 2024 Aug |
| Quantitative Detection of Thyroid-Stimulating Hormone in Patient Samples with a Nanomechanical Single-Antibody Spectro-Immunoassay. | Zheng, Peng; Raj, Piyush; Wu, Lintong; Mizutani, Takayuki; Szabo, Miklos; Hanson, William A; Barman, Ishan | Small (Weinheim an der Bergstrasse, Germany) | 37752776 | 2024 Feb |
| New dimensions of electrospun nanofiber material designs for biotechnological uses. | Kamaraj, Meenakshi; Moghimi, Nafiseh; Chen, Junjie; Morales, Ramon; Chen, Shixuan; Khademhosseini, Ali; John, Johnson V | Trends in biotechnology | 38158307 | 2024 May |
| TESOS: an integrated approach for uniform mesoscale imaging. | Wang, Yu; Ye, Li | Cell research | 38168641 | 2024 Feb |
| Bioassay-Driven, Fractionation-Empowered, Focused Metabolomics for Discovering Bacterial Activators of Aryl Hydrocarbon Receptor. | Tian, Huidi; Wang, Lei; Hardy, Rachel; Kozhaya, Lina; Placek, Lindsey; Fleming, Elizabeth; Oh, Julia; Unutmaz, Derya; Yao, Xudong | Journal of the American Society for Mass Spectrometry | 38308645 | 2024 Mar 06 |
| Accuracy of digital chest x-ray analysis with artificial intelligence software as a triage and screening tool in hospitalized patients being evaluated for tuberculosis in Lima, Peru. | Biewer, Amanda M; Tzelios, Christine; Tintaya, Karen; Roman, Betsabe; Hurwitz, Shelley; Yuen, Courtney M; Mitnick, Carole D; Nardell, Edward; Lecca, Leonid; Tierney, Dylan B; Nathavitharana, Ruvandhi R | PLOS global public health | 38324610 | 2024 |
| Intra-Articular Injectable Biomaterials for Cartilage Repair and Regeneration. | Kalairaj, Manivannan Sivaperuman; Pradhan, Ridhi; Saleem, Waqas; Smith, Morgan M; Gaharwar, Akhilesh K | Advanced healthcare materials | 38324655 | 2024 Jul |
| Covert cortical processing: a diagnosis in search of a definition. | Young, Michael J; Fecchio, Matteo; Bodien, Yelena G; Edlow, Brian L | Neuroscience of consciousness | 38327828 | 2024 |
| Highly specific intracellular ubiquitination of a small molecule. | Li, Weicheng; Garcia-Rivera, Enrique M; Mitchell, Dylan C; Chick, Joel M; Maetani, Micah; Knapp, John M; Matthews, Geoffrey M; Shirasaki, Ryosuke; de Matos Simoes, Ricardo; Viswanathan, Vasanthi; Pulice, John L; Rees, Matthew G; Roth, Jennifer A; Gygi, Steven P; Mitsiades, Constantine S; Kadoch, Cigall; Schreiber, Stuart L; Ostrem, Jonathan M L | bioRxiv : the preprint server for biology | 38328167 | 2024 Jan 28 |
| Modeling and dissociation of intrinsic and input-driven neural population dynamics underlying behavior. | Vahidi, Parsa; Sani, Omid G; Shanechi, Maryam M | Proceedings of the National Academy of Sciences of the United States of America | 38335258 | 2024 Feb 13 |
| Emerging strategies for nanomedicine in autoimmunity. | Thatte, Ajay S; Billingsley, Margaret M; Weissman, Drew; Melamed, Jilian R; Mitchell, Michael J | Advanced drug delivery reviews | 38342243 | 2024 Apr |
| O-GlcNAc forces an α-synuclein amyloid strain with notably diminished seeding and pathology. | Balana, Aaron T; Mahul-Mellier, Anne-Laure; Nguyen, Binh A; Horvath, Mian; Javed, Afraah; Hard, Eldon R; Jasiqi, Yllza; Singh, Preeti; Afrin, Shumaila; Pedretti, Rose; Singh, Virender; Lee, Virginia M-Y; Luk, Kelvin C; Saelices, Lorena; Lashuel, Hilal A; Pratt, Matthew R | Nature chemical biology | 38347213 | 2024 May |
| Prior dengue virus serotype 3 infection modulates subsequent plasmablast responses to Zika virus infection in rhesus macaques. | Singh, Tulika; Miller, Itzayana G; Venkatayogi, Sravani; Webster, Helen; Heimsath, Holly J; Eudailey, Josh A; Dudley, Dawn M; Kumar, Amit; Mangan, Riley J; Thein, Amelia; Aliota, Matthew T; Newman, Christina M; Mohns, Mariel S; Breitbach, Meghan E; Berry, Madison; Friedrich, Thomas C; Wiehe, Kevin; O'Connor, David H; Permar, Sallie R | mBio | 38349142 | 2024 Mar 13 |
| MYC is sufficient to generate mid-life high-grade serous ovarian and uterine serous carcinomas in a p53-R270H mouse model. | Blackman, Alexandra; Rees, Amy C; Bowers, Robert R; Jones, Christian M; Vaena, Silvia G; Clark, Madison A; Carter, Shelby; Villamor, Evan D; Evans, Della; Emanuel, Anthony J; Fullbright, George; Long, David T; Spruill, Laura; Romeo, Martin J; Helke, Kristi L; Delaney, Joe R | bioRxiv : the preprint server for biology | 38352443 | 2024 Jan 29 |
| scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells. | Bowers, Robert M; Gonzalez-Pena, Veronica; Wardhani, Kartika; Goudeau, Danielle; Blow, Matthew James; Udwary, Daniel; Klein, David; Vill, Albert C; Brito, Ilana L; Woyke, Tanja; Malmstrom, Rex; Gawad, Charles | bioRxiv : the preprint server for biology | 38352480 | 2024 Jan 31 |
| Psilocybin-enhanced fear extinction linked to bidirectional modulation of cortical ensembles. | Rogers, Sophie A; Heller, Elizabeth A; Corder, Gregory | bioRxiv : the preprint server for biology | 38352491 | 2024 May 15 |
| A meta-analysis of the gut microbiome in inflammatory bowel disease patients identifies disease-associated small molecules. | Elmassry, Moamen M; Sugihara, Kohei; Chankhamjon, Pranatchareeya; Camacho, Francine R; Wang, Shuo; Sugimoto, Yuki; Chatterjee, Seema; Chen, Lea Ann; Kamada, Nobuhiko; Donia, Mohamed S | bioRxiv : the preprint server for biology | 38370680 | 2024 Feb 08 |
| Circadian rhythm and whole gut transit in mice. | Laible, Emma; Wegner, Andrew; Knutson, Kaitlyn; Kacmaz, Halil; Garramone, Gwyneth K; Gogineni, Kamalika; Matveyenko, Aleksey; Linden, David R; Farrugia, Gianrico; Beyder, Arthur | Neurogastroenterology and motility | 38396340 | 2024 Apr |
| North-south pathways, emerging variants, and high climate suitability characterize the recent spread of dengue virus serotypes 2 and 3 in the Dominican Republic. | Miguel, Isaac; Feliz, Edwin P; Agramonte, Robinson; Martinez, Pedro V; Vergara, Carlos; Imbert, Yvonne; De la Cruz, Lucia; de Castro, Nurys; Cedano, Odalis; De la Paz, Yamilka; Fonseca, Vagner; Santiago, Gilberto A; Muñoz-Jordán, Jorge L; Peguero, Armando; Paulino-Ramírez, Robert; Grubaugh, Nathan D; de Filippis, Ana Maria Bispo; Alcantara, Luiz Carlos Junior; Rico, Jairo Mendez; Lourenço, José; Franco, Leticia; Giovanetti, Marta | medRxiv : the preprint server for health sciences | 38405721 | 2024 Feb 15 |
| Mechanical activation of TWIK-related potassium channel by nanoscopic movement and rapid second messenger signaling. | Petersen, E Nicholas; Pavel, Mahmud Arif; Hansen, Samuel S; Gudheti, Manasa; Wang, Hao; Yuan, Zixuan; Murphy, Keith R; Ja, William; Ferris, Heather A; Jorgensen, Erik; Hansen, Scott B | eLife | 38407149 | 2024 Feb 26 |
| Novel Secreted Effectors Conserved Among Smut Fungi Contribute to the Virulence of Ustilago maydis. | Schuster, Mariana; Schweizer, Gabriel; Reißmann, Stefanie; Happel, Petra; Aßmann, Daniela; Rössel, Nicole; Güldener, Ulrich; Mannhaupt, Gertrud; Ludwig, Nicole; Winterberg, Sarah; Pellegrin, Clément; Tanaka, Shigeyuki; Vincon, Volker; Presti, Libera Lo; Wang, Lei; Bender, Lena; Gonzalez, Carla; Vranes, Miroslav; Kämper, Jörg; Seong, Kyungyong; Krasileva, Ksenia; Kahmann, Regine | Molecular plant-microbe interactions : MPMI | 38416124 | 2024 Mar |
| Incomplete transcripts dominate the Mycobacterium tuberculosis transcriptome. | Ju, Xiangwu; Li, Shuqi; Froom, Ruby; Wang, Ling; Lilic, Mirjana; Delbeau, Madeleine; Campbell, Elizabeth A; Rock, Jeremy M; Liu, Shixin | Nature | 38418874 | 2024 Mar |
| Antigen Presenting Cell Mimetic Lipid Nanoparticles for Rapid mRNA CAR T Cell Cancer Immunotherapy. | Metzloff, Ann E; Padilla, Marshall S; Gong, Ningqiang; Billingsley, Margaret M; Han, Xuexiang; Merolle, Maria; Mai, David; Figueroa-Espada, Christian G; Thatte, Ajay S; Haley, Rebecca M; Mukalel, Alvin J; Hamilton, Alex G; Alameh, Mohamad-Gabriel; Weissman, Drew; Sheppard, Neil C; June, Carl H; Mitchell, Michael J | Advanced materials (Deerfield Beach, Fla.) | 38419362 | 2024 Jun |
| High-throughput barcoding of nanoparticles identifies cationic, degradable lipid-like materials for mRNA delivery to the lungs in female preclinical models. | Xue, Lulu; Hamilton, Alex G; Zhao, Gan; Xiao, Zebin; El-Mayta, Rakan; Han, Xuexiang; Gong, Ningqiang; Xiong, Xinhong; Xu, Junchao; Figueroa-Espada, Christian G; Shepherd, Sarah J; Mukalel, Alvin J; Alameh, Mohamad-Gabriel; Cui, Jiaxi; Wang, Karin; Vaughan, Andrew E; Weissman, Drew; Mitchell, Michael J | Nature communications | 38424061 | 2024 Feb 29 |
| A mouse DRG genetic toolkit reveals morphological and physiological diversity of somatosensory neuron subtypes. | Qi, Lijun; Iskols, Michael; Shi, David; Reddy, Pranav; Walker, Christopher; Lezgiyeva, Karina; Voisin, Tiphaine; Pawlak, Mathias; Kuchroo, Vijay K; Chiu, Isaac M; Ginty, David D; Sharma, Nikhil | Cell | 38442711 | 2024 Mar 14 |
| Alpha-mannosidase-2 modulates arbovirus infection in a pathogen- and Wolbachia-specific manner in Aedes aegypti mosquitoes. | Urakova, Nadya; Joseph, Renuka E; Huntsinger, Allyn; Macias, Vanessa M; Jones, Matthew J; Sigle, Leah T; Li, Ming; Akbari, Omar S; Xi, Zhiyong; Lymperopoulos, Konstantinos; Sayre, Richard T; McGraw, Elizabeth A; Rasgon, Jason L | Insect molecular biology | 38450861 | 2024 Aug |
| GLP-1 Receptor Agonists and Colorectal Cancer Risk in Drug-Naive Patients With Type 2 Diabetes, With and Without Overweight/Obesity. | Wang, Lindsey; Wang, William; Kaelber, David C; Xu, Rong; Berger, Nathan A | JAMA oncology | 38060218 | 2024 Feb 01 |
| Transcriptional changes are tightly coupled to chromatin reorganization during cellular aging. | Braunger, Jana M; Cammarata, Louis V; Sornapudi, Trinadha Rao; Uhler, Caroline; Shivashankar, G V | Aging cell | 38062919 | 2024 Mar |
| In Vivo mRNA CAR T Cell Engineering via Targeted Ionizable Lipid Nanoparticles with Extrahepatic Tropism. | Billingsley, Margaret M; Gong, Ningqiang; Mukalel, Alvin J; Thatte, Ajay S; El-Mayta, Rakan; Patel, Savan K; Metzloff, Ann E; Swingle, Kelsey L; Han, Xuexiang; Xue, Lulu; Hamilton, Alex G; Safford, Hannah C; Alameh, Mohamad-Gabriel; Papp, Tyler E; Parhiz, Hamideh; Weissman, Drew; Mitchell, Michael J | Small (Weinheim an der Bergstrasse, Germany) | 38072809 | 2024 Mar |
| Metabolic and transcriptional activities underlie stationary-phase Pseudomonas aeruginosa sensitivity to Levofloxacin. | Hare, Patricia J; Gonzalez, Juliet R; Quelle, Ryan M; Wu, Yi I; Mok, Wendy W K | Microbiology spectrum | 38078717 | 2024 Jan 11 |
| Base-editing mutagenesis maps alleles to tune human T cell functions. | Schmidt, Ralf; Ward, Carl C; Dajani, Rama; Armour-Garb, Zev; Ota, Mineto; Allain, Vincent; Hernandez, Rosmely; Layeghi, Madeline; Xing, Galen; Goudy, Laine; Dorovskyi, Dmytro; Wang, Charlotte; Chen, Yan Yi; Ye, Chun Jimmie; Shy, Brian R; Gilbert, Luke A; Eyquem, Justin; Pritchard, Jonathan K; Dodgson, Stacie E; Marson, Alexander | Nature | 38093011 | 2024 Jan |
| Using dynamic biomaterials to study the temporal role of bioactive peptides during osteogenesis. | Fumasi, Fallon M; MacCulloch, Tara; Bernal-Chanchavac, Julio; Stephanopoulos, Nicholas; Holloway, Julianne L | Biomaterials advances | 38096646 | 2024 Feb |
| A programmable reaction-diffusion system for spatiotemporal cell signaling circuit design. | Rajasekaran, Rohith; Chang, Chih-Chia; Weix, Elliott W Z; Galateo, Thomas M; Coyle, Scott M | Cell | 38181787 | 2024 Jan 18 |
| Ketone bodies as chemical signals for the immune system. | Gonzatti, Michelangelo B; Goldberg, Emily L | American journal of physiology. Cell physiology | 38189135 | 2024 Mar 01 |
| A pairwise cytokine code explains the organism-wide response to sepsis. | Takahama, Michihiro; Patil, Ashwini; Richey, Gabriella; Cipurko, Denis; Johnson, Katherine; Carbonetto, Peter; Plaster, Madison; Pandey, Surya; Cheronis, Katerina; Ueda, Tatsuki; Gruenbaum, Adam; Kawamoto, Tadafumi; Stephens, Matthew; Chevrier, Nicolas | Nature immunology | 38191855 | 2024 Feb |
| Primary T-cell-based delivery platform for in vivo synthesis of engineered proteins. | Radhakrishnan, Harikrishnan; Newmyer, Sherri L; Ssemadaali, Marvin A; Javitz, Harold S; Bhatnagar, Parijat | Bioengineering & translational medicine | 38193126 | 2024 Jan |
| Electro-metabolic signaling. | Longden, Thomas A; Lederer, W Jonathan | The Journal of general physiology | 38197953 | 2024 Feb 05 |
| Controlling placental spheroid growth and phenotype using engineered synthetic hydrogel matrices. | Slaby, Emily M; Plaisier, Seema B; Brady, Sarah R; Hiremath, Shivani C; Weaver, Jessica D | Biomaterials science | 38204396 | 2024 Feb 13 |
| Epigenetic Regulation of Cardiomyocyte Maturation by Arginine Methyltransferase CARM1. | Garbutt, Tiffany A; Wang, Zhenhua; Wang, Haofei; Ma, Hong; Ruan, Hongmei; Dong, Yanhan; Xie, Yifang; Tan, Lianmei; Phookan, Ranan; Stouffer, Joy A; Vedantham, Vasanth; Yang, Yuchen; Qian, Li; Liu, Jiandong | Circulation | 38223978 | 2024 May 07 |
| Double and triple thermodynamic mutant cycles reveal the basis for specific MsbA-lipid interactions. | Lyu, Jixing; Zhang, Tianqi; Marty, Michael T; Clemmer, David; Russell, David H; Laganowsky, Arthur | eLife | 38252560 | 2024 Jan 22 |
| A mass cytometry approach to track the evolution of T cell responses during infection and immunotherapy by paired T cell receptor repertoire and T cell differentiation state analysis. | Castillo, Jesse Garcia; DeBarge, Rachel; Mende, Abigail; Tenvooren, Iliana; Marquez, Diana M; Straub, Adrian; Busch, Dirk H; Spitzer, Matthew H; DuPage, Michel | bioRxiv : the preprint server for biology | 38260336 | 2024 Jan 12 |
| Behavioral screening of conserved RNA-binding proteins reveals CEY-1/YBX RNA-binding protein dysfunction leads to impairments in memory and cognition. | Hayden, Ashley N; Brandel, Katie L; Merlau, Paul R; Vijayakumar, Priyadharshini; Leptich, Emily J; Pietryk, Edward W; Gaytan, Elizabeth S; Ni, Connie W; Chao, Hsiao-Tuan; Rosenfeld, Jill A; Arey, Rachel N | bioRxiv : the preprint server for biology | 38260399 | 2024 May 02 |
| Somatic cancer driver mutations are enriched and associated with inflammatory states in Alzheimer's disease microglia. | Huang, August Yue; Zhou, Zinan; Talukdar, Maya; Miller, Michael B; Chhouk, Brian; Enyenihi, Liz; Rosen, Ila; Stronge, Edward; Zhao, Boxun; Kim, Dachan; Choi, Jaejoon; Khoshkhoo, Sattar; Kim, Junho; Ganz, Javier; Travaglini, Kyle; Gabitto, Mariano; Hodge, Rebecca; Kaplan, Eitan; Lein, Ed; De Jager, Philip L; Bennett, David A; Lee, Eunjung Alice; Walsh, Christopher A | bioRxiv : the preprint server for biology | 38260600 | 2024 Jan 04 |
| Label-Retention Expansion Microscopy (LR-ExM) for Enhanced Fluorescent Signals using Trifunctional Probes. | Zhuang, Yinyin; Shi, Xiaoyu | Current protocols | 38265180 | 2024 Jan |
| Phosphorylation of pyruvate dehydrogenase inversely associates with neuronal activity. | Yang, Dong; Wang, Yu; Qi, Tianbo; Zhang, Xi; Shen, Leyao; Ma, Jingrui; Pang, Zhengyuan; Lal, Neeraj K; McClatchy, Daniel B; Seradj, Saba Heydari; Leung, Verina H; Wang, Kristina; Xie, Yi; Polli, Filip S; Maximov, Anton; Gonzalez, Oscar Christian; de Lecea, Luis; Cline, Hollis T; Augustine, Vineet; Yates 3rd, John R; Ye, Li | Neuron | 38266644 | 2024 Mar 20 |
| Mechanistic insights into radical formation and functionalization in copper/N-fluorobenzenesulfonimide radical-relay reactions. | Mandal, Mukunda; Buss, Joshua A; Chen, Si-Jie; Cramer, Christopher J; Stahl, Shannon S | Chemical science | 38274066 | 2024 Jan 24 |
| Distinct genomic contexts predict gene presence-absence variation in different pathotypes of Magnaporthe oryzae. | Joubert, Pierre M; Krasileva, Ksenia V | Genetics | 38290434 | 2024 Apr 03 |
| Modular Phoneme Processing in Human Superior Temporal Gyrus. | Cleary, Daniel R; Tchoe, Youngbin; Bourhis, Andrew; Dickey, Charles W; Stedelin, Brittany; Ganji, Mehran; Lee, Sang Hoen; Lee, Jihwan; Siler, Dominic A; Brown, Erik C; Rosen, Burke Q; Kaestner, Erik; Yang, Jimmy C; Soper, Daniel J; Han, Seunggu Jude; Paulk, Angelique C; Cash, Sydney S; Raslan, Ahmed M T; Dayeh, Shadi A; Halgren, Eric | bioRxiv : the preprint server for biology | 38293030 | 2024 Jan 19 |
| Genome scale CRISPR screens identify actin capping proteins as key modulators of therapeutic responses to radiation and immunotherapy. | Verma, Nipun; Renauer, Paul A; Dong, Chuanpeng; Xin, Shan; Lin, Qianqian; Zhang, Feifei; Glazer, Peter M; Chen, Sidi | bioRxiv : the preprint server for biology | 38293095 | 2024 Jan 15 |
| Cellular arrangement impacts metabolic activity and antibiotic tolerance in Pseudomonas aeruginosa biofilms. | Dayton, Hannah; Kiss, Julie; Wei, Mian; Chauhan, Shradha; LaMarre, Emily; Cornell, William Cole; Morgan, Chase J; Janakiraman, Anuradha; Min, Wei; Tomer, Raju; Price-Whelan, Alexa; Nirody, Jasmine A; Dietrich, Lars E P | PLoS biology | 38300958 | 2024 Feb |
| Extracellular matrix protein composition dynamically changes during murine forelimb development. | Jacobson, Kathryn R; Saleh, Aya M; Lipp, Sarah N; Tian, Chengzhe; Watson, Audrey R; Luetkemeyer, Callan M; Ocken, Alexander R; Spencer, Sabrina L; Kinzer-Ursem, Tamara L; Calve, Sarah | iScience | 38303699 | 2024 Feb 16 |
| Determination of fatty acid uptake and desaturase activity in mammalian cells by NMR-based stable isotope tracing. | Lin, Penghui; Sledziona, James; Akkaya-Colak, Kubra B; Mihaylova, Maria M; Lane, Andrew N | Analytica chimica acta | 38609261 | 2024 May 15 |
| Using narratives to correct politically charged health misinformation and address affective belief echoes. | Lillie, Helen M; Ratcliff, Chelsea L; King, Andy J; Pokharel, Manusheela; Jensen, Jakob D | Journal of public health (Oxford, England) | 38632889 | 2024 Aug 25 |
| Targeting Recycling Endosomes to Potentiate mRNA Lipid Nanoparticles. | Shin, Jeehae; Douglas, Cameron J; Zhang, Shanwen; Seath, Ciaran P; Bao, Huan | Nano letters | 38640421 | 2024 May 01 |
| Disruption of Cholinergic Retinal Waves Alters Visual Cortex Development and Function. | Burbridge, Timothy J; Ratliff, Jacob M; Dwivedi, Deepanjali; Vrudhula, Uma; Alvarado-Huerta, Francisco; Sjulson, Lucas; Ibrahim, Leena Ali; Cheadle, Lucas; Fishell, Gordon; Batista-Brito, Renata | bioRxiv : the preprint server for biology | 38644996 | 2024 Apr 15 |
| Dopamine transients encode reward prediction errors independent of learning rates. | Mah, Andrew; Golden, Carla E M; Constantinople, Christine M | bioRxiv : the preprint server for biology | 38659861 | 2024 Aug 19 |
| APOL1-Mediated Kidney Disease. | Hopper, Timothy; Olabisi, Opeyemi A | JAMA | 38662391 | 2024 May 21 |
| Precision Assessment of Real-World Associations Between Stress and Sleep Duration Using Actigraphy Data Collected Continuously for an Academic Year: Individual-Level Modeling Study. | Vidal Bustamante, Constanza M; Coombs Iii, Garth; Rahimi-Eichi, Habiballah; Mair, Patrick; Onnela, Jukka-Pekka; Baker, Justin T; Buckner, Randy L | JMIR formative research | 38687600 | 2024 Apr 30 |
| Chemokine receptor PET imaging: Bridging molecular insights with clinical applications. | Hunter, Chanelle; Larimer, Benjamin | Nuclear medicine and biology | 38691942 | 2024 |
| Biochemical and structural insights into a 5' to 3' RNA ligase reveal a potential role in tRNA ligation. | Hu, Yingjie; Lopez, Victor A; Xu, Hengyi; Pfister, James P; Song, Bing; Servage, Kelly A; Sakurai, Masahiro; Jones, Benjamin T; Mendell, Joshua T; Wang, Tao; Wu, Jun; Lambowitz, Alan M; Tomchick, Diana R; Pawłowski, Krzysztof; Tagliabracci, Vincent S | bioRxiv : the preprint server for biology | 38712170 | 2024 Apr 24 |
| Audio-Based Emotion Recognition Using Self-Supervised Learning on an Engineered Feature Space. | Nimitsurachat, Peranut; Washington, Peter | AI (Basel, Switzerland) | 38715564 | 2024 Mar |
| Direct transposition of native DNA for sensitive multimodal single-molecule sequencing. | Nanda, Arjun S; Wu, Ke; Irkliyenko, Iryna; Woo, Brian; Ostrowski, Megan S; Clugston, Andrew S; Sayles, Leanne C; Xu, Lingru; Satpathy, Ansuman T; Nguyen, Hao G; Alejandro Sweet-Cordero, E; Goodarzi, Hani; Kasinathan, Sivakanthan; Ramani, Vijay | Nature genetics | 38724748 | 2024 Jun |
| TWISP: a transgenic worm for interrogating signal propagation in Caenorhabditis elegans. | Sharma, Anuj Kumar; Randi, Francesco; Kumar, Sandeep; Dvali, Sophie; Leifer, Andrew M | Genetics | 38733622 | 2024 Jul 08 |
| Age-related dysregulation of the retinal transcriptome in African turquoise killifish. | Bergmans, Steven; Noel, Nicole C L; Masin, Luca; Harding, Ellen G; Krzywańska, Aleksandra M; De Schutter, Julie D; Ayana, Rajagopal; Hu, Chi-Kuo; Arckens, Lut; Ruzycki, Philip A; MacDonald, Ryan B; Clark, Brian S; Moons, Lieve | Aging cell | 38742929 | 2024 Aug |
| Mimicking opioid analgesia in cortical pain circuits. | James, Justin G; McCall, Nora M; Hsu, Alex I; Oswell, Corinna S; Salimando, Gregory J; Mahmood, Malaika; Wooldridge, Lisa M; Wachira, Meghan; Jo, Adrienne; Sandoval Ortega, Raquel Adaia; Wojick, Jessica A; Beattie, Katherine; Farinas, Sofia A; Chehimi, Samar N; Rodrigues, Amrith; Ejoh, Lind-Say L; Kimmey, Blake A; Lo, Emily; Azouz, Ghalia; Vasquez, Jose J; Banghart, Matthew R; Creasy, Kate Townsend; Beier, Kevin T; Ramakrishnan, Charu; Crist, Richard C; Reiner, Benjamin C; Deisseroth, Karl; Yttri, Eric A; Corder, Gregory | bioRxiv : the preprint server for biology | 38746090 | 2024 Apr 29 |
| Discovery and Quantification of Long-Range RNA Base Pairs in Coronavirus Genomes with SEARCH-MaP and SEISMIC-RNA. | Allan, Matthew F; Aruda, Justin; Plung, Jesse S; Grote, Scott L; Martin des Taillades, Yves J; de Lajarte, Albéric A; Bathe, Mark; Rouskin, Silvi | bioRxiv : the preprint server for biology | 38746332 | 2024 Jul 28 |
| Granular Biphasic Colloidal Hydrogels for 3D Bioprinting. | Deo, Kaivalya A; Murali, Aparna; Tronolone, James J; Mandrona, Cole; Lee, Hung Pang; Rajput, Satyam; Hargett, Sarah E; Selahi, Amirali; Sun, Yuxiang; Alge, Daniel L; Jain, Abhishek; Gaharwar, Akhilesh K | Advanced healthcare materials | 38749006 | 2024 May 15 |
| Correlative single molecule lattice light sheet imaging reveals the dynamic relationship between nucleosomes and the local chromatin environment. | Daugird, Timothy A; Shi, Yu; Holland, Katie L; Rostamian, Hosein; Liu, Zhe; Lavis, Luke D; Rodriguez, Joseph; Strahl, Brian D; Legant, Wesley R | Nature communications | 38755200 | 2024 May 16 |
| Programmable RNA targeting with CRISPR-Cas13. | Shi, Peiguo; Wu, Xuebing | RNA biology | 38764173 | 2024 Jan |
| Intraspecies warfare restricts strain coexistence in human skin microbiomes. | Mancuso, Christopher P; Baker, Jacob S; Qu, Evan; Tripp, A Delphine; Balogun, Ishaq O; Lieberman, Tami D | bioRxiv : the preprint server for biology | 38765968 | 2024 May 07 |
| Flp-recombinase mouse line for genetic manipulation of ipRGCs. | Contreras, E; Liang, C; Mahoney, H L; Javier, J L; Luce, M L; Labastida Medina, K; Bozza, T; Schmidt, T M | bioRxiv : the preprint server for biology | 38766000 | 2024 May 08 |
| A series of spontaneously blinking dyes for super-resolution microscopy. | Holland, Katie L; Plutkis, Sarah E; Daugird, Timothy A; Sau, Abhishek; Grimm, Jonathan B; English, Brian P; Zheng, Qinsi; Dave, Sandeep; Rahman, Fariha; Xie, Liangqi; Dong, Peng; Tkachuk, Ariana N; Brown, Timothy A; Singer, Robert H; Liu, Zhe; Galbraith, Catherine G; Musser, Siegfried M; Legant, Wesley R; Lavis, Luke D | bioRxiv : the preprint server for biology | 38766149 | 2024 Feb 24 |
| AAV5 Delivery of CRISPR/Cas9 Mediates Genome Editing in the Lungs of Young Rhesus Monkeys. | Liang, Shun-Qing; Navia, Andrew W; Ramseier, Michelle; Zhou, Xuntao; Martinez, Michele; Lee, Charles; Zhou, Chen; Wu, Joae; Xie, Jun; Su, Qin; Wang, Dan; Flotte, Terence R; Anderson, Daniel G; Tarantal, Alice F; Shalek, Alex K; Gao, Guangping; Xue, Wen | Human gene therapy | 38767512 | 2024 Jul 03 |
| Detection of Circulating Transthyretin Amyloid Aggregates in Plasma: A Novel Biomarker for Transthyretin Amyloidosis. | Pedretti, Rose; Wang, Lanie; Hanna, Mazen; Benson, Merrill D; Grodin, Justin L; Tang, W H Wilson; Masri, Ahmad; Saelices, Lorena | Circulation | 38768274 | 2024 May 21 |
| [18F]FMISO-PET imaging reveals the role of hypoxia severity in checkpoint blockade response. | McNeal, Kaytlyn C; Reeves, Kirsten M; Song, Patrick N; Lapi, Suzanne E; Sorace, Anna G; Larimer, Benjamin M | Nuclear medicine and biology | 38772123 | 2024 |
| Construction of Reconfigurable and Polymorphic DNA Origami Assemblies with Coiled-Coil Patches and Patterns. | Teng, Teng; Bernal-Chanchavac, Julio; Stephanopoulos, Nicholas; Castro, Carlos E | Advanced science (Weinheim, Baden-Wurttemberg, Germany) | 38459678 | 2024 May |
| Dietary fiber is a critical determinant of pathologic ILC2 responses and intestinal inflammation. | Arifuzzaman, Mohammad; Won, Tae Hyung; Yano, Hiroshi; Uddin, Jazib; Emanuel, Elizabeth R; Hu, Elin; Zhang, Wen; Li, Ting-Ting; Jin, Wen-Bing; Grier, Alex; Kashyap, Sanchita; JRI Live Cell Bank; Guo, Chun-Jun; Schroeder, Frank C; Artis, David | The Journal of experimental medicine | 38506708 | 2024 May 06 |
| A host-microbiota interactome reveals extensive transkingdom connectivity. | Sonnert, Nicole D; Rosen, Connor E; Ghazi, Andrew R; Franzosa, Eric A; Duncan-Lowey, Brianna; González-Hernández, Jaime A; Huck, John D; Yang, Yi; Dai, Yile; Rice, Tyler A; Nguyen, Mytien T; Song, Deguang; Cao, Yiyun; Martin, Anjelica L; Bielecka, Agata A; Fischer, Suzanne; Guan, Changhui; Oh, Julia; Huttenhower, Curtis; Ring, Aaron M; Palm, Noah W | Nature | 38509360 | 2024 Apr |
| Compensatory evolution in NusG improves fitness of drug-resistant M. tuberculosis. | Eckartt, Kathryn A; Delbeau, Madeleine; Munsamy-Govender, Vanisha; DeJesus, Michael A; Azadian, Zachary A; Reddy, Abhijna K; Chandanani, Joshua; Poulton, Nicholas C; Quiñones-Garcia, Stefany; Bosch, Barbara; Landick, Robert; Campbell, Elizabeth A; Rock, Jeremy M | Nature | 38509362 | 2024 Apr |
| Increased enhancer-promoter interactions during developmental enhancer activation in mammals. | Chen, Zhuoxin; Snetkova, Valentina; Bower, Grace; Jacinto, Sandra; Clock, Benjamin; Dizehchi, Atrin; Barozzi, Iros; Mannion, Brandon J; Alcaina-Caro, Ana; Lopez-Rios, Javier; Dickel, Diane E; Visel, Axel; Pennacchio, Len A; Kvon, Evgeny Z | Nature genetics | 38509385 | 2024 Apr |
| Branched chemically modified poly(A) tails enhance the translation capacity of mRNA. | Chen, Hongyu; Liu, Dangliang; Guo, Jianting; Aditham, Abhishek; Zhou, Yiming; Tian, Jiakun; Luo, Shuchen; Ren, Jingyi; Hsu, Alvin; Huang, Jiahao; Kostas, Franklin; Wu, Mingrui; Liu, David R; Wang, Xiao | Nature biotechnology | 38519719 | 2024 Mar 22 |
| Preparation of Bioconjugates of Chimeric M13 Phage and Gold Nanorods. | Peng, Huan; Chen, Irene A | Methods in molecular biology (Clifton, N.J.) | 38526728 | 2024 |
| Barcoding of episodic memories in the hippocampus of a food-caching bird. | Chettih, Selmaan N; Mackevicius, Emily L; Hale, Stephanie; Aronov, Dmitriy | Cell | 38554707 | 2024 Apr 11 |
| A Data-Driven Approach to Estimate Human Center of Mass State During Perturbed Locomotion Using Simulated Wearable Sensors. | Leestma, Jennifer K; Smith, Courtney R; Sawicki, Gregory S; Young, Aaron J | Annals of biomedical engineering | 38558352 | 2024 Aug |
| Nonpathogenic E. coli engineered to surface display cytokines as a new platform for immunotherapy. | Yang, Shaobo; Sheffer, Michal; Kaplan, Isabel E; Wang, Zongqi; Tarannum, Mubin; Dinh, Khanhlinh; Abdulhamid, Yasmin; Shapiro, Roman; Porter, Rebecca; Soiffer, Robert; Ritz, Jerome; Koreth, John; Wei, Yun; Chen, Peiru; Zhang, Ke; Márquez-Pellegrin, Valeria; Bonanno, Shanna; Joshi, Neel; Guan, Ming; Yang, Mengdi; Li, Deng; Bellini, Chiara; Chen, Jianzhu; Wu, Catherine J; Barbie, David; Li, Jiahe; Romee, Rizwan | Research square | 38562821 | 2024 Mar 22 |
| Improving prime editing with an endogenous small RNA-binding protein. | Yan, Jun; Oyler-Castrillo, Paul; Ravisankar, Purnima; Ward, Carl C; Levesque, Sébastien; Jing, Yangwode; Simpson, Danny; Zhao, Anqi; Li, Hui; Yan, Weihao; Goudy, Laine; Schmidt, Ralf; Solley, Sabrina C; Gilbert, Luke A; Chan, Michelle M; Bauer, Daniel E; Marson, Alexander; Parsons, Lance R; Adamson, Britt | Nature | 38570691 | 2024 Apr |
| Reconstructing axial progenitor field dynamics in mouse stem cell-derived embryoids. | Bolondi, Adriano; Law, Benjamin K; Kretzmer, Helene; Gassaloglu, Seher Ipek; Buschow, René; Riemenschneider, Christina; Yang, Dian; Walther, Maria; Veenvliet, Jesse V; Meissner, Alexander; Smith, Zachary D; Chan, Michelle M | Developmental cell | 38579718 | 2024 Jun 17 |
| Acute multi-level response to defective de novo chromatin assembly in S-phase. | Dreyer, Jan; Ricci, Giulia; van den Berg, Jeroen; Bhardwaj, Vivek; Funk, Janina; Armstrong, Claire; van Batenburg, Vincent; Sine, Chance; VanInsberghe, Michael A; Marsman, Richard; Mandemaker, Imke K; di Sanzo, Simone; Costantini, Juliette; Manzo, Stefano G; Biran, Alva; Burny, Claire; Völker-Albert, Moritz; Groth, Anja; Spencer, Sabrina L; van Oudenaarden, Alexander; Mattiroli, Francesca | bioRxiv : the preprint server for biology | 38585916 | 2024 Mar 27 |
| Mutational scanning of CRX classifies clinical variants and reveals biochemical properties of the transcriptional effector domain. | Shepherdson, James L; Granas, David M; Li, Jie; Shariff, Zara; Plassmeyer, Stephen P; Holehouse, Alex S; White, Michael A; Cohen, Barak A | bioRxiv : the preprint server for biology | 38585983 | 2024 Mar 27 |
| Prairie voles as a model for adaptive reward remodeling following loss of a bonded partner. | Sadino, Julie M; Donaldson, Zoe R | Annals of the New York Academy of Sciences | 38594916 | 2024 May |
| A Perspective on Crowdsourcing and Human-in-the-Loop Workflows in Precision Health. | Washington, Peter | Journal of medical Internet research | 38602750 | 2024 Apr 11 |
| AMPK regulates phagophore-to-autophagosome maturation. | Barnaba, Carlo; Broadbent, David G; Kaminsky, Emily G; Perez, Gloria I; Schmidt, Jens C | The Journal of cell biology | 38775785 | 2024 Aug 05 |
| The Horse with Recurrent Fevers and Infections: Approach to Common Variable Immunodeficiency. | Mullen, Kathleen Rory; Felippe, Maria Julia Bevilaqua | The Veterinary clinics of North America. Equine practice | 38789347 | 2024 Aug |
| Ribosome rescue factor PELOTA modulates translation start site choice for C/EBPα protein isoforms. | Fernandez, Samantha G; Ferguson, Lucas; Ingolia, Nicholas T | Life science alliance | 38803235 | 2024 Jul |
| Quantification of cerebrospinal fluid tumor DNA in lung cancer patients with suspected leptomeningeal carcinomatosis. | Azad, Tej D; Nanjo, Shigeki; Jin, Michael C; Chabon, Jacob J; Kurtz, David M; Chaudhuri, Aadel A; Connolly, Ian D; Hui, Angela Bik-Yu; Liu, Chih Long; Merriott, David; Ko, Ryan; Yoo, Christopher; Carter, Justin; Chen, Emily; Bonilla, Rene; Hata, Akito; Katakami, Nobuyuki; Irie, Kei; Yano, Seiji; Okimoto, Ross; Bivona, Trever G; Newman, Aaron M; Iv, Michael; Nagpal, Seema; Gephart, Melanie Hayden; Alizadeh, Ash A; Diehn, Maximilian | NPJ precision oncology | 38806586 | 2024 May 28 |
| Oral delivery of nanomedicine for genetic kidney disease. | Huang, Yi; Wang, Jonathan; Mancino, Valeria; Pham, Jessica; O'Grady, Colette; Li, Hui; Jiang, Kairui; Chin, Deborah; Poon, Christopher; Ho, Pei-Yin; Gyarmati, Georgina; Peti-Peterdi, János; Hallows, Kenneth R; Chung, Eun Ji | PNAS nexus | 38807632 | 2024 May |
| Associations Between Self and Study Partner Report of Cognitive Decline With Regional Tau in a Multicohort Study. | Jadick, Michalina F; Robinson, Talia; Farrell, Michelle E; Klinger, Hannah; Buckley, Rachel F; Marshall, Gad A; Vannini, Patrizia; Rentz, Dorene M; Johnson, Keith A; Sperling, Reisa A; Amariglio, Rebecca E | Neurology | 38810211 | 2024 Jun 25 |
| Single-molecule imaging reveals the kinetics of non-homologous end-joining in living cells. | Mikhova, Mariia; Goff, Noah J; Janovič, Tomáš; Heyza, Joshua R; Meek, Katheryn; Schmidt, Jens C | bioRxiv : the preprint server for biology | 38826211 | 2024 May 25 |
| Keratin 19 (Krt19) is a novel marker gene for epicardial cells. | Xu, Juan; Deng, Yiting; Li, Guang | Frontiers in genetics | 38831775 | 2024 |
| Single-nucleus multi-omic profiling of polyploid heart nuclei identifies fusion-derived cardiomyocytes in the human heart. | Choudhury, Sangita; Sivankutty, Indu; Jung, Youngsook; Huang, August; Araten, Sarah; Kenny, Connor; An, Zheming; Doan, Ryan; Foijer, Floris; Matsu, Erica; Rosen, Ila; Marciano, Jack; Jain, Asish; Sun, Liang; Hilal, Nazia; Lee, Eunjung; Walsh, Christopher; Chen, Ming | Research square | 38853931 | 2024 May 30 |
| LiveLattice: Real-time visualization of tilted light-sheet microscopy data using a memory-efficient transformation algorithm. | Wang, Zichen; Hakozaki, Hiroyuki; McMahon, Gillian; Medina-Carbonero, Marta; Schöneberg, Johannes | bioRxiv : the preprint server for biology | 38854017 | 2024 May 30 |
| An autoinhibitory switch of the LSD1 disordered region controls enhancer silencing. | Waterbury, Amanda L; Kwok, Hui Si; Lee, Ceejay; Narducci, Domenic N; Freedy, Allyson M; Su, Cindy; Raval, Shaunak; Reiter, Andrew H; Hawkins, William; Lee, Kwangwoon; Li, Jiaming; Hoenig, Samuel M; Vinyard, Michael E; Cole, Philip A; Hansen, Anders S; Carr, Steven A; Papanastasiou, Malvina; Liau, Brian B | Molecular cell | 38870936 | 2024 Jun 20 |
| Modelling patient drug exposure profiles in vitro to narrow the valley of death. | Leasure, Catherine S; Neuert, Gregor | Nature reviews bioengineering | 38873361 | 2024 Mar |
| Parental History of Memory Impairment and β-Amyloid in Cognitively Unimpaired Older Adults. | Seto, Mabel; Hohman, Timothy J; Mormino, Elizabeth C; Papp, Kathryn V; Amariglio, Rebecca E; Rentz, Dorene M; Johnson, Keith A; Schultz, Aaron P; Sperling, Reisa A; Buckley, Rachel F; Yang, Hyun-Sik | JAMA neurology | 38884955 | 2024 Aug 01 |
| Elucidating the Role of Human ALAS2 C-terminal Mutations Resulting in Loss of Function and Disease. | Taylor, Jessica L; Ayres-Galhardo, Pedro H; Brown, Breann L | Biochemistry | 38888931 | 2024 Jul 02 |
| Intracellular pH dynamics respond to microenvironment stiffening and mediate vasculogenic mimicry through β-catenin. | Lund, Leah M; Marchi, Angelina N; Alderfer, Laura; Hall, Eva; Hammer, Jacob; Trull, Keelan J; Hanjaya-Putra, Donny; White, Katharine A | bioRxiv : the preprint server for biology | 38895391 | 2024 Jun 04 |
| Direct prediction of intermolecular interactions driven by disordered regions. | Ginell, Garrett M; Emenecker, Ryan J; Lotthammer, Jeffrey M; Usher, Emery T; Holehouse, Alex S | bioRxiv : the preprint server for biology | 38895487 | 2024 Jun 03 |
| A library-on-library screen reveals the breadth expansion landscape of a broadly neutralizing betacoronavirus antibody. | Ornelas, Marya Y; Ouyang, Wenhao O; Wu, Nicholas C | bioRxiv : the preprint server for biology | 38915656 | 2024 Jun 10 |
| Pharmacokinetics and Biodistribution of Phages and their Current Applications in Antimicrobial Therapy. | Kang, Dayeon; Bagchi, Damayanti; Chen, Irene A | Advanced therapeutics | 38933919 | 2024 Mar |
| The 18S rRNA Methyltransferase DIMT-1 Regulates Lifespan in the Germline Later in Life. | Rothi, M Hafiz; Haddad, Joseph Al; Sarkar, Gautam Chandra; Mitchell, Wayne; Ying, Kejun; Pohl, Nancy; Sotomayor, Roberto; Natale, Julia; Dellacono, Scarlett; Gladyshev, Vadim N; Greer, Eric Lieberman | Research square | 38946979 | 2024 Jun 21 |
| Spinal interneuron population dynamics underlying flexible pattern generation. | Wimalasena, Lahiru N; Pandarinath, Chethan; Yong, Nicholas Au | bioRxiv : the preprint server for biology | 38948833 | 2024 Jun 23 |
| APOL1 Variant and Kidney Disease-Reply. | Hopper, Timothy; Olabisi, Opeyemi A | JAMA | 39186317 | 2024 Sep 24 |
| Structure of the human heparan-α-glucosaminide N-acetyltransferase (HGSNAT). | Navratna, Vikas; Kumar, Arvind; Rana, Jaimin K; Mosalaganti, Shyamal | eLife | 39196614 | 2024 Aug 28 |
| Mapping the nuclear landscape with multiplexed super-resolution fluorescence microscopy. | Rahman, Fariha; Augoustides, Victoria; Tyler, Emma; Daugird, Timothy A; Arthur, Christian; Legant, Wesley R | bioRxiv : the preprint server for biology | 39211261 | 2024 Jul 29 |
| High-throughput affinity measurements of direct interactions between activation domains and co-activators. | DelRosso, Nicole; Suzuki, Peter H; Griffith, Daniel; Lotthammer, Jeffrey M; Novak, Borna; Kocalar, Selin; Sheth, Maya U; Holehouse, Alex S; Bintu, Lacramioara; Fordyce, Polly | bioRxiv : the preprint server for biology | 39229005 | 2024 Aug 20 |
| Molecular Visualization of Neuronal TDP43 Pathology In Situ. | Erwin, Amanda L; Chang, Matthew L; Fernandez, Martin G; Attili, Durga; Russ, Jennifer E; Sutanto, Renaldo; Pinarbasi, Emile S; Bekier, Michael; Brant, Tyler S; Hahn, Terry; Dykstra, Megan; Thomas, Dafydd; Li, Xingli; Baldridge, Ryan D; Tank, Elizabeth M H; Barmada, Sami J; Mosalaganti, Shyamal | bioRxiv : the preprint server for biology | 39229019 | 2024 Aug 19 |
| MiniXL: An open-source, large field-of-view epifluorescence miniature microscope for mice capable of single-cell resolution and multi-brain region imaging. | Zhao, Pingping; Guo, Changliang; Xie, Mian; Chen, Liangyi; Golshani, Peyman; Aharoni, Daniel | bioRxiv : the preprint server for biology | 39229051 | 2024 Aug 19 |
| HMGB1 restores a dynamic chromatin environment in the presence of linker histone by deforming nucleosomal DNA. | Saunders, Hayden S; Chio, Un Seng; Moore, Camille M; Ramani, Vijay; Cheng, Yifan; Narlikar, Geeta J | bioRxiv : the preprint server for biology | 39229246 | 2024 Aug 24 |
| Continuous multiplexed phage genome editing using recombitrons. | Fishman, Chloe B; Crawford, Kate D; Bhattarai-Kline, Santi; Poola, Darshini; Zhang, Karen; González-Delgado, Alejandro; Rojas-Montero, Matías; Shipman, Seth L | Nature biotechnology | 39237706 | 2024 Sep 05 |
| A new lineage nomenclature to aid genomic surveillance of dengue virus. | Hill, Verity; Cleemput, Sara; Pereira, James Siqueira; Gifford, Robert J; Fonseca, Vagner; Tegally, Houriiyah; Brito, Anderson F; Ribeiro, Gabriela; de Souza, Vinicius Carius; Brcko, Isabela Carvalho; Ribeiro, Igor Santana; De Lima, Iago Trezena Tavares; Slavov, Svetoslav Nanev; Sampaio, Sandra Coccuzzo; Elias, Maria Carolina; Tran, Vi Thuy; Kien, Duong Thi Hue; Huynh, Tuyen; Yacoub, Sophie; Dieng, Idrissa; Salvato, Richard; Wallau, Gabriel Luz; Gregianini, Tatiana S; Godinho, Fernanda M S; Vogels, Chantal B F; Breban, Mallery I; Leguia, Mariana; Jagtap, Suraj; Roy, Rahul; Hapuarachchi, Chanditha; Mwanyika, Gaspary; Giovanetti, Marta; Alcantara, Luiz C J; Faria, Nuno R; Carrington, Christine V F; Hanley, Kathryn A; Holmes, Edward C; Dumon, Wim; Lima, Alex Ranieri Jerônimo; Oliveira, Tulio de; Grubaugh, Nathan D | PLoS biology | 39283942 | 2024 Sep |
| Perirhinal cortex learns a predictive map of the task environment. | Lee, David G; McLachlan, Caroline A; Nogueira, Ramon; Kwon, Osung; Carey, Alanna E; House, Garrett; Lagani, Gavin D; LaMay, Danielle; Fusi, Stefano; Chen, Jerry L | Nature communications | 38956015 | 2024 Jul 02 |
| Uncoupling histone modification crosstalk by engineering lysine demethylase LSD1. | Lee, Kwangwoon; Barone, Marco; Waterbury, Amanda L; Jiang, Hanjie; Nam, Eunju; DuBois-Coyne, Sarah E; Whedon, Samuel D; Wang, Zhipeng A; Caroli, Jonatan; Neal, Katherine; Ibeabuchi, Brian; Dhoondia, Zuzer; Kuroda, Mitzi I; Liau, Brian B; Beck, Samuel; Mattevi, Andrea; Cole, Philip A | Nature chemical biology | 38965385 | 2024 Jul 04 |
| BioMapAI: Artificial Intelligence Multi-Omics Modeling of Myalgic Encephalomyelitis / Chronic Fatigue Syndrome. | Xiong, Ruoyun; Fleming, Elizabeth; Caldwell, Ryan; Vernon, Suzanne D; Kozhaya, Lina; Gunter, Courtney; Bateman, Lucinda; Unutmaz, Derya; Oh, Julia | bioRxiv : the preprint server for biology | 38979186 | 2024 Jun 28 |
| Control of innate olfactory valence by segregated cortical amygdala circuits. | Howe, James R; Chan, Chung-Lung; Lee, Donghyung; Blanquart, Marlon; Romero, Haylie K; Zadina, Abigail N; Lemieux, Mackenzie E; Mills, Fergil; Desplats, Paula A; Tye, Kay M; Root, Cory M | bioRxiv : the preprint server for biology | 38979308 | 2024 Jul 04 |
| A single-cell transcriptomic atlas of sensory-dependent gene expression in developing mouse visual cortex. | Xavier, Andre M; Lin, Qianyu; Kang, Chris J; Cheadle, Lucas | bioRxiv : the preprint server for biology | 38979325 | 2024 Jun 26 |
| Identification and characterization of a skin microbiome on Caenorhabditis elegans suggests environmental microbes confer cuticle protection. | Haghani, Nadia B; Lampe, Robert H; Samuel, Buck S; Chalasani, Sreekanth H; Matty, Molly A | Microbiology spectrum | 38980017 | 2024 Aug 06 |
| Healthcare Providers' Resilience Communication: A New Type of Patient-Centered Communication. | Lillie, Helen M | Journal of health communication | 38982683 | 2024 Aug 02 |
| Surface-Grafted Biocompatible Polymer Conductors for Stable and Compliant Electrodes for Brain Interfaces. | Blau, Rachel; Russman, Samantha M; Qie, Yi; Shipley, Wade; Lim, Allison; Chen, Alexander X; Nyayachavadi, Audithya; Ah, Louis; Abdal, Abdulhameed; Esparza, Guillermo L; Edmunds, Samuel J; Vatsyayan, Ritwik; Dunfield, Sean P; Halder, Moumita; Jokerst, Jesse V; Fenning, David P; Tao, Andrea R; Dayeh, Shadi A; Lipomi, Darren J | Advanced healthcare materials | 39011811 | 2024 Jul 16 |
| scMicrobe PTA: near complete genomes from single bacterial cells. | Bowers, Robert M; Gonzalez-Pena, Veronica; Wardhani, Kartika; Goudeau, Danielle; Blow, Matthew James; Udwary, Daniel; Klein, David; Vill, Albert C; Brito, Ilana L; Woyke, Tanja; Malmstrom, Rex R; Gawad, Charles | ISME communications | 39021442 | 2024 Jan |
| Local genetic adaptation to habitat in wild chimpanzees. | Ostridge, Harrison J; Fontsere, Claudia; Lizano, Esther; Soto, Daniela C; Schmidt, Joshua M; Saxena, Vrishti; Alvarez-Estape, Marina; Barratt, Christopher D; Gratton, Paolo; Bocksberger, Gaëlle; Lester, Jack D; Dieguez, Paula; Agbor, Anthony; Angedakin, Samuel; Assumang, Alfred Kwabena; Bailey, Emma; Barubiyo, Donatienne; Bessone, Mattia; Brazzola, Gregory; Chancellor, Rebecca; Cohen, Heather; Coupland, Charlotte; Danquah, Emmanuel; Deschner, Tobias; Dotras, Laia; Dupain, Jef; Egbe, Villard Ebot; Granjon, Anne-Céline; Head, Josephine; Hedwig, Daniela; Hermans, Veerle; Hernandez-Aguilar, R Adriana; Jeffery, Kathryn J; Jones, Sorrel; Junker, Jessica; Kadam, Parag; Kaiser, Michael; Kalan, Ammie K; Kambere, Mbangi; Kienast, Ivonne; Kujirakwinja, Deo; Langergraber, Kevin E; Lapuente, Juan; Larson, Bradley; Laudisoit, Anne; Lee, Kevin C; Llana, Manuel; Maretti, Giovanna; Martín, Rumen; Meier, Amelia; Morgan, David; Neil, Emily; Nicholl, Sonia; Nixon, Stuart; Normand, Emmanuelle; Orbell, Christopher; Ormsby, Lucy Jayne; Orume, Robinson; Pacheco, Liliana; Preece, Jodie; Regnaut, Sebastien; Robbins, Martha M; Rundus, Aaron; Sanz, Crickette; Sciaky, Lilah; Sommer, Volker; Stewart, Fiona A; Tagg, Nikki; Tédonzong, Luc Roscelin; van Schijndel, Joost; Vendras, Elleni; Wessling, Erin G; Willie, Jacob; Wittig, Roman M; Yuh, Yisa Ginath; Yurkiw, Kyle; Vigilant, Linda; Piel, Alex; Boesch, Christophe; Kühl, Hjalmar S; Dennis, Megan Y; Marques-Bonet, Tomas; Arandjelovic, Mimi; Andrés, Aida M | bioRxiv : the preprint server for biology | 39026872 | 2024 Jul 09 |
| Rapid, Multiplexed, and Enzyme-Free Nucleic Acid Detection Using Programmable Aptamer-Based RNA Switches. | Yan, Zhaoqing; Eshed, Amit; Tang, Anli A; Arevalos, Nery R; Ticktin, Zachary M; Chaudhary, Soma; Ma, Duo; McCutcheon, Griffin; Li, Yudan; Wu, Kaiyue; Saha, Sanchari; Alcantar-Fernandez, Jonathan; Moreno-Camacho, Jose L; Campos-Romero, Abraham; Collins, James J; Yin, Peng; Green, Alexander A | Chem | 39036067 | 2024 Jul 11 |
| Large-scale discovery of chromatin dysregulation induced by oncofusions and other protein-coding variants. | Frenkel, Max; Corban, James E; Hujoel, Margaux L A; Morris, Zachary; Raman, Srivatsan | Nature biotechnology | 39048711 | 2024 Jul 24 |
| Neuropathologically directed profiling of PRNP somatic and germline variants in sporadic human prion disease. | McDonough, Gannon A; Cheng, Yuchen; Morillo, Katherine S; Doan, Ryan N; Zhou, Zinan; Kenny, Connor J; Foutz, Aaron; Kim, Chae; Cohen, Mark L; Appleby, Brian S; Walsh, Christopher A; Safar, Jiri G; Huang, August Yue; Miller, Michael B | Acta neuropathologica | 39048735 | 2024 Jul 24 |
| Extended Pharmacokinetics Improve Site-Specific Prodrug Activation Using Radiation. | Quintana, Jeremy M; Kang, Mikyung; Hu, Huiyu; Ng, Thomas S C; Wojtkiewicz, Gregory R; Scott, Ella; Parangi, Sareh; Schuemann, Jan; Weissleder, Ralph; Miller, Miles A | ACS central science | 39071065 | 2024 Jul 24 |
| Context-dependent roles for autophagy in myeloid cells in tumor progression. | Choi, Jayoung; Park, Gayoung; Lee, Steve Seung-Young; Dominici, Erin; Becker, Lev; Macleod, Kay F; Kron, Stephen J; Hwang, Seungmin | bioRxiv : the preprint server for biology | 39071306 | 2024 Jul 16 |
| Resolving DJ-1 Glyoxalase Catalysis Using Mix-and-Inject Serial Crystallography at a Synchrotron. | Zielinski, Kara A; Dolamore, Cole; Dalton, Kevin M; Smith, Nathan; Termini, John; Henning, Robert; Srajer, Vukica; Hekstra, Doeke R; Pollack, Lois; Wilson, Mark A | bioRxiv : the preprint server for biology | 39071394 | 2024 Jul 20 |
| Model-based navigation of transcranial focused ultrasound neuromodulation in humans: Application to targeting the amygdala and thalamus. | Daneshzand, Mohammad; Guerin, Bastien; Kotlarz, Parker; Chou, Tina; Dougherty, Darin D; Edlow, Brian L; Nummenmaa, Aapo | Brain stimulation | 39094682 | 2024 |
| Barriers and facilitators to tuberculosis diagnosis in Lima, Peru: a mixed methods study. | Geadas, Carolina; Millones, Ana Karina; Acosta, Diana; Campos, Hortencia; Del Aguila-Rojas, Erika; Farroñay, Sheyla; Morales, Giannina; Ramirez-Sandoval, Judith; Torres, Isabel; Jimenez, Judith; Lecca, Leonid; Yuen, Courtney M | BMC infectious diseases | 39118040 | 2024 Aug 08 |
| Splice-switching antisense oligonucleotides for pediatric neurological disorders. | Zhang, Xiaochang | Frontiers in molecular neuroscience | 39119251 | 2024 |
| Accurate neuron segmentation method for one-photon calcium imaging videos combining convolutional neural networks and clustering. | Bao, Yijun; Gong, Yiyang | Communications biology | 39122882 | 2024 Aug 09 |
| Mapping protein conformational landscapes from crystallographic drug fragment screens. | Saeed, Ammaar A; Klureza, Margaret A; Hekstra, Doeke R | bioRxiv : the preprint server for biology | 39131376 | 2024 Jul 30 |
| Human brain organoids for understanding substance use disorders. | Li, Kangle; Gu, Longjun; Cai, Hongwei; Lu, Hui-Chen; Mackie, Ken; Guo, Feng | Drug metabolism and pharmacokinetics | 39146603 | 2024 Jul 26 |
| Transcriptome Complexity Disentangled: A Regulatory Molecules Approach. | Asiaee, Amir; Abrams, Zachary B; Pua, Heather H; Coombes, Kevin R | bioRxiv : the preprint server for biology | 37131792 | 2024 May 09 |
| Three linked variants have opposing regulatory effects on isovaleryl-CoA dehydrogenase gene expression. | Brown, Elizabeth A; Kales, Susan; Boyle, Michael James; Vitti, Joseph; Kotliar, Dylan; Schaffner, Steve; Tewhey, Ryan; Sabeti, Pardis C | Human molecular genetics | 37930192 | 2024 Jan 20 |
| Ectopic Expression of a Truncated Isoform of Hair Keratin 81 in Breast Cancer Alters Biophysical Characteristics to Promote Metastatic Propensity. | Kang, Diane S; Moriarty, Aidan; Wang, Yiru Jess; Thomas, Amal; Hao, Jia; Unger, Bret A; Klotz, Remi; Ahmmed, Shamim; Amzaleg, Yonatan; Martin, Stuart; Vanapalli, Siva; Xu, Ke; Smith, Andrew; Shen, Keyue; Yu, Min | Advanced science (Weinheim, Baden-Wurttemberg, Germany) | 37949677 | 2024 Feb |
| R-Loop Accumulation in Spliceosome Mutant Leukemias Confers Sensitivity to PARP1 Inhibition by Triggering Transcription-Replication Conflicts. | Liu, Zhiyan Silvia; Sinha, Sayantani; Bannister, Maxwell; Song, Axia; Arriaga-Gomez, Erica; McKeeken, Alexander J; Bonner, Elizabeth A; Hanson, Benjamin K; Sarchi, Martina; Takashima, Kouhei; Zong, Dawei; Corral, Victor M; Nguyen, Evan; Yoo, Jennifer; Chiraphapphaiboon, Wannasiri; Leibson, Cassandra; McMahon, Matthew C; Rai, Sumit; Swisher, Elizabeth M; Sachs, Zohar; Chatla, Srinivas; Stirewalt, Derek L; Deeg, H Joachim; Skorski, Tomasz; Papapetrou, Eirini P; Walter, Matthew J; Graubert, Timothy A; Doulatov, Sergei; Lee, Stanley C; Nguyen, Hai Dang | Cancer research | 37967363 | 2024 Feb 15 |
| Plasma membrane repair empowers the necrotic survivors as innate immune modulators. | Xu, Shiqi; Yang, Tyler J; Xu, Suhong; Gong, Yi-Nan | Seminars in cell & developmental biology | 37648621 | 2024 Mar 15 |
| Methylmalonic acid in aging and disease. | Tejero, Joanne; Lazure, Felicia; Gomes, Ana P | Trends in endocrinology and metabolism: TEM | 38030482 | 2024 Mar |
| MatchMaps: Non-isomorphous difference maps for X-ray crystallography. | Brookner, Dennis E; Hekstra, Doeke R | bioRxiv : the preprint server for biology | 37732267 | 2024 Jan 02 |
| High-Affinity Host-Guest Recognition for Efficient Assembly and Enzymatic Responsiveness of DNA Nanostructures. | Narayanan, Raghu Pradeep; Prasad, Abhay; Buchberger, Alex; Zou, Lei; Bernal-Chanchavac, Julio; MacCulloch, Tara; Fahmi, Nour Eddine; Yan, Hao; Zhang, Fei; Webber, Matthew J; Stephanopoulos, Nicholas | Small (Weinheim an der Bergstrasse, Germany) | 37849034 | 2024 Mar |
| CRISPR screen for protein inclusion formation uncovers a role for SRRD in the regulation of intermediate filament dynamics and aggresome assembly. | Sweeney, Katelyn M; Chantarawong, Sapanna; Barbieri, Edward M; Cajka, Greg; Liu, Matthew; Spruce, Lynn; Fazelinia, Hossein; Portz, Bede; Copley, Katie; Lapidot, Tomer; Duhamel, Lauren; Greenwald, Phoebe; Saida, Naseeb; Shalgi, Reut; Shorter, James; Shalem, Ophir | PLoS genetics | 38315730 | 2024 Feb |
| Precision treatment of viral pneumonia through macrophage-targeted lipid nanoparticle delivery. | Zhao, Gan; Xue, Lulu; Geisler, Hannah C; Xu, Junchao; Li, Xinyuan; Mitchell, Michael J; Vaughan, Andrew E | Proceedings of the National Academy of Sciences of the United States of America | 38315853 | 2024 Feb 13 |
| DNA damage remodels the MITF interactome to increase melanoma genomic instability. | Binet, Romuald; Lambert, Jean-Philippe; Tomkova, Marketa; Tischfield, Samuel; Baggiolini, Arianna; Picaud, Sarah; Sarkar, Sovan; Louphrasitthiphol, Pakavarin; Dias, Diogo; Carreira, Suzanne; Humphrey, Timothy C; Fillipakopoulos, Panagis; White, Richard; Goding, Colin R | Genes & development | 38316520 | 2024 Feb 13 |
| Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing. | Zhang, Aixin; Jin, Lei; Yao, Shenqin; Matsuyama, Makoto; van Velthoven, Cindy T J; Sullivan, Heather Anne; Sun, Na; Kellis, Manolis; Tasic, Bosiljka; Wickersham, Ian; Chen, Xiaoyin | eLife | 38319699 | 2024 Feb 06 |
| Genome-wide association study identifies human genetic variants associated with fatal outcome from Lassa fever. | Kotliar, Dylan; Raju, Siddharth; Tabrizi, Shervin; Odia, Ikponmwosa; Goba, Augustine; Momoh, Mambu; Sandi, John Demby; Nair, Parvathy; Phelan, Eric; Tariyal, Ridhi; Eromon, Philomena E; Mehta, Samar; Robles-Sikisaka, Refugio; Siddle, Katherine J; Stremlau, Matt; Jalloh, Simbirie; Gire, Stephen K; Winnicki, Sarah; Chak, Bridget; Schaffner, Stephen F; Pauthner, Matthias; Karlsson, Elinor K; Chapin, Sarah R; Kennedy, Sharon G; Branco, Luis M; Kanneh, Lansana; Vitti, Joseph J; Broodie, Nisha; Gladden-Young, Adrianne; Omoniwa, Omowunmi; Jiang, Pan-Pan; Yozwiak, Nathan; Heuklom, Shannon; Moses, Lina M; Akpede, George O; Asogun, Danny A; Rubins, Kathleen; Kales, Susan; Happi, Anise N; Iruolagbe, Christopher O; Dic-Ijiewere, Mercy; Iraoyah, Kelly; Osazuwa, Omoregie O; Okonkwo, Alexander K; Kunz, Stefan; McCormick, Joseph B; Khan, S Humarr; Honko, Anna N; Lander, Eric S; Oldstone, Michael B A; Hensley, Lisa; Folarin, Onikepe A; Okogbenin, Sylvanus A; Günther, Stephan; Ollila, Hanna M; Tewhey, Ryan; Okokhere, Peter O; Schieffelin, John S; Andersen, Kristian G; Reilly, Steven K; Grant, Donald S; Garry, Robert F; Barnes, Kayla G; Happi, Christian T; Sabeti, Pardis C | Nature microbiology | 38326571 | 2024 Mar |
| Sensitization of meningeal afferents to locomotion-related meningeal deformations in a migraine model. | Blaeser, Andrew S; Zhao, Jun; Sugden, Arthur U; Carneiro-Nascimento, Simone; Andermann, Mark L; Levy, Dan | eLife | 38329894 | 2024 Feb 08 |
| Synonymous Mutations Can Alter Protein Dimerization Through Localized Interface Misfolding Involving Self-entanglements. | Lan, Pham Dang; Nissley, Daniel Allen; Sitarik, Ian; Vu, Quyen V; Jiang, Yang; To, Philip; Xia, Yingzi; Fried, Stephen D; Li, Mai Suan; O'Brien, Edward P | Journal of molecular biology | 38341172 | 2024 Mar 15 |
| SLC25A51 decouples the mitochondrial NAD+/NADH ratio to control proliferation of AML cells. | Lu, Mu-Jie; Busquets, Jonathan; Impedovo, Valeria; Wilson, Crystal N; Chan, Hsin-Ru; Chang, Yu-Tai; Matsui, William; Tiziani, Stefano; Cambronne, Xiaolu A | Cell metabolism | 38354740 | 2024 Apr 02 |
| Autonomous transposons tune their sequences to ensure somatic suppression. | Ilık, İbrahim Avşar; Glažar, Petar; Tse, Kevin; Brändl, Björn; Meierhofer, David; Müller, Franz-Josef; Smith, Zachary D; Aktaş, Tuğçe | Nature | 38355802 | 2024 Feb |
| Single-Molecule Spectroscopy and Super-Resolution Mapping of Physicochemical Parameters in Living Cells. | Steves, Megan A; He, Changdong; Xu, Ke | Annual review of physical chemistry | 38360526 | 2024 Jun |
| A biomaterial platform for T cell-specific gene delivery. | Pandit, Sharda; Smith, Blake E; Birnbaum, Michael E; Brudno, Yevgeny | Acta biomaterialia | 38364929 | 2024 Mar 15 |
| De novo mutations mediate phenotypic switching in an opportunistic human lung pathogen. | Poret, Alexandra J; Schaefers, Matthew; Merakou, Christina; Mansour, Kathryn E; Lagoudas, Georgia K; Cross, Ashley R; Goldberg, Joanna B; Kishony, Roy; Uluer, Ahmet Z; McAdam, Alexander J; Blainey, Paul C; Vargas, Sara O; Lieberman, Tami D; Priebe, Gregory P | bioRxiv : the preprint server for biology | 38370793 | 2024 Feb 06 |
| Helical vasculogenesis driven by cell chirality. | Zhang, Haokang; Rahman, Tasnif; Lu, Shuhan; Adam, Alejandro Pablo; Wan, Leo Q | Science advances | 38381835 | 2024 Feb 23 |
| XIST directly regulates X-linked and autosomal genes in naive human pluripotent cells. | Dror, Iris; Chitiashvili, Tsotne; Tan, Shawn Y X; Cano, Clara T; Sahakyan, Anna; Markaki, Yolanda; Chronis, Constantinos; Collier, Amanda J; Deng, Weixian; Liang, Guohao; Sun, Yu; Afasizheva, Anna; Miller, Jarrett; Xiao, Wen; Black, Douglas L; Ding, Fangyuan; Plath, Kathrin | Cell | 38181737 | 2024 Jan 04 |
| Most axonal mitochondria in cortical pyramidal neurons lack mitochondrial DNA and consume ATP. | Hirabayashi, Yusuke; Lewis Jr, Tommy L; Du, Yudan; Virga, Daniel M; Decker, Aubrianna M; Coceano, Giovanna; Alvelid, Jonatan; Paul, Maëla A; Hamilton, Stevie; Kneis, Parker; Takahashi, Yasufumi; Gaublomme, Jellert T; Testa, Ilaria; Polleux, Franck | bioRxiv : the preprint server for biology | 38405915 | 2024 Feb 13 |
| A nociceptive amygdala-striatal pathway for chronic pain aversion. | Wojick, Jessica A; Paranjapye, Alekh; Chiu, Juliann K; Mahmood, Malaika; Oswell, Corinna; Kimmey, Blake A; Wooldridge, Lisa M; McCall, Nora M; Han, Alan; Ejoh, Lindsay L; Chehimi, Samar Nasser; Crist, Richard C; Reiner, Benjamin C; Korb, Erica; Corder, Gregory | bioRxiv : the preprint server for biology | 38405972 | 2024 Feb 13 |
| A combinatorial genetic strategy for exploring complex genotype-phenotype associations in cancer. | Li, Shan; Wong, Alicia; Sun, Huiyun; Bhatia, Vipul; Javier, Gerardo; Jana, Sujata; Wu, Qian; Montgomery, Robert B; Wright, Jonathan L; Lam, Hung-Ming; Hsieh, Andrew C; Faltas, Bishoy M; Haffner, Michael C; Lee, John K | Nature genetics | 38424461 | 2024 Mar |
| Mass Spectrometry Imaging and Histology for the Analysis of Budding Intestinal Organoids. | Sekera, Emily R; Akkaya-Colak, Kubra B; Lopez, Arbil; Mihaylova, Maria M; Hummon, Amanda B | Analytical chemistry | 38427328 | 2024 Mar 12 |
| Lipid nanoparticle structure and delivery route during pregnancy dictate mRNA potency, immunogenicity, and maternal and fetal outcomes. | Chaudhary, Namit; Newby, Alexandra N; Arral, Mariah L; Yerneni, Saigopalakrishna S; LoPresti, Samuel T; Doerfler, Rose; Petersen, Daria M Strelkova; Montoya, Catalina; Kim, Julie S; Fox, Bethany; Coon, Tiffany; Malaney, Angela; Sadovsky, Yoel; Whitehead, Kathryn A | Proceedings of the National Academy of Sciences of the United States of America | 38437545 | 2024 Mar 12 |
| Dissection of a CTCF topological boundary uncovers principles of enhancer-oncogene regulation. | Kim, Kyung Lock; Rahme, Gilbert J; Goel, Viraat Y; El Farran, Chadi A; Hansen, Anders S; Bernstein, Bradley E | Molecular cell | 38452764 | 2024 Apr 04 |
| Nucleus accumbens dopamine release reflects the selective nature of pair bonds. | Pierce, Anne F; Protter, David S W; Watanabe, Yurika L; Chapel, Gabriel D; Cameron, Ryan T; Donaldson, Zoe R | Current biology : CB | 38218185 | 2024 Feb 05 |
| Flexible, scalable, high channel count stereo-electrode for recording in the human brain. | Lee, Keundong; Paulk, Angelique C; Ro, Yun Goo; Cleary, Daniel R; Tonsfeldt, Karen J; Kfir, Yoav; Pezaris, John S; Tchoe, Youngbin; Lee, Jihwan; Bourhis, Andrew M; Vatsyayan, Ritwik; Martin, Joel R; Russman, Samantha M; Yang, Jimmy C; Baohan, Amy; Richardson, R Mark; Williams, Ziv M; Fried, Shelley I; Hoi Sang, U; Raslan, Ahmed M; Ben-Haim, Sharona; Halgren, Eric; Cash, Sydney S; Dayeh, Shadi A | Nature communications | 38233418 | 2024 Jan 17 |
| Prevotella copri variants among a single host diverge in sphingolipid production. | Xiao, Xieyue; Le, Henry H; Lee, Min-Ting; Lamm, Daniel; Johnson, Elizabeth L; Brito, Ilana L | mBio | 38236049 | 2024 Feb 14 |
| Highly-resolved within-species dynamics in the human facial skin microbiome. | Baker, Jacob S; Qu, Evan; Mancuso, Christopher P; Tripp, A Delphine; Conwill, Arolyn; Lieberman, Tami D | bioRxiv : the preprint server for biology | 38260404 | 2024 Jan 10 |
| Splice modulators target PMS1 to reduce somatic expansion of the Huntington's disease-associated CAG repeat. | McLean, Zachariah L; Gao, Dadi; Correia, Kevin; Roy, Jennie C L; Shibata, Shota; Farnum, Iris N; Valdepenas-Mellor, Zoe; Kovalenko, Marina; Rapuru, Manasa; Morini, Elisabetta; Ruliera, Jayla; Gillis, Tammy; Lucente, Diane; Kleinstiver, Benjamin P; Lee, Jong-Min; MacDonald, Marcy E; Wheeler, Vanessa C; Mouro Pinto, Ricardo; Gusella, James F | Nature communications | 38609352 | 2024 Apr 12 |
| Bioorthogonally activated reactive species for target identification. | Siriwongsup, Surached; Schmoker, Anna M; Ficarro, Scott B; Marto, Jarrod A; Kim, Justin | Chem | 38617077 | 2024 Apr 11 |
| Reimagining Cortical Connectivity by Deconstructing Its Molecular Logic into Building Blocks. | Chen, Xiaoyin | Cold Spring Harbor perspectives in biology | 38621822 | 2024 Apr 15 |
| iPSC-based modeling of preeclampsia identifies epigenetic defects in extravillous trophoblast differentiation. | Morey, Robert; Bui, Tony; Cheung, Virginia Chu; Dong, Chen; Zemke, Joseph E; Requena, Daniela; Arora, Harneet; Jackson, Madeline G; Pizzo, Donald; Theunissen, Thorold W; Horii, Mariko | iScience | 38623329 | 2024 Apr 19 |
| DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. | Takahashi, Mariko; Chong, Harrison B; Zhang, Siwen; Yang, Tzu-Yi; Lazarov, Matthew J; Harry, Stefan; Maynard, Michelle; Hilbert, Brendan; White, Ryan D; Murrey, Heather E; Tsou, Chih-Chiang; Vordermark, Kira; Assaad, Jonathan; Gohar, Magdy; Dürr, Benedikt R; Richter, Marianne; Patel, Himani; Kryukov, Gregory; Brooijmans, Natasja; Alghali, Aliyu Sidi Omar; Rubio, Karla; Villanueva, Antonio; Zhang, Junbing; Ge, Maolin; Makram, Farah; Griesshaber, Hanna; Harrison, Drew; Koglin, Ann-Sophie; Ojeda, Samuel; Karakyriakou, Barbara; Healy, Alexander; Popoola, George; Rachmin, Inbal; Khandelwal, Neha; Neil, Jason R; Tien, Pei-Chieh; Chen, Nicholas; Hosp, Tobias; van den Ouweland, Sanne; Hara, Toshiro; Bussema, Lillian; Dong, Rui; Shi, Lei; Rasmussen, Martin Q; Domingues, Ana Carolina; Lawless, Aleigha; Fang, Jacy; Yoda, Satoshi; Nguyen, Linh Phuong; Reeves, Sarah Marie; Wakefield, Farrah Nicole; Acker, Adam; Clark, Sarah Elizabeth; Dubash, Taronish; Kastanos, John; Oh, Eugene; Fisher, David E; Maheswaran, Shyamala; Haber, Daniel A; Boland, Genevieve M; Sade-Feldman, Moshe; Jenkins, Russell W; Hata, Aaron N; Bardeesy, Nabeel M; Suvà, Mario L; Martin, Brent R; Liau, Brian B; Ott, Christopher J; Rivera, Miguel N; Lawrence, Michael S; Bar-Peled, Liron | Cell | 38653237 | 2024 May 09 |
| Travel surveillance uncovers dengue virus dynamics and introductions in the Caribbean. | Taylor-Salmon, Emma; Hill, Verity; Paul, Lauren M; Koch, Robert T; Breban, Mallery I; Chaguza, Chrispin; Sodeinde, Afeez; Warren, Joshua L; Bunch, Sylvia; Cano, Natalia; Cone, Marshall; Eysoldt, Sarah; Garcia, Alezaundra; Gilles, Nicadia; Hagy, Andrew; Heberlein, Lea; Jaber, Rayah; Kassens, Elizabeth; Colarusso, Pamela; Davis, Amanda; Baudin, Samantha; Rico, Edhelene; Mejía-Echeverri, Álvaro; Scott, Blake; Stanek, Danielle; Zimler, Rebecca; Muñoz-Jordán, Jorge L; Santiago, Gilberto A; Adams, Laura E; Paz-Bailey, Gabriela; Spillane, Melanie; Katebi, Volha; Paulino-Ramírez, Robert; Mueses, Sayira; Peguero, Armando; Sánchez, Nelissa; Norman, Francesca F; Galán, Juan-Carlos; Huits, Ralph; Hamer, Davidson H; Vogels, Chantal B F; Morrison, Andrea; Michael, Scott F; Grubaugh, Nathan D | Nature communications | 38664380 | 2024 Apr 25 |
| Corticospinal Modulation of Precision Movements. | Marino, Francesca; Moreno-López, Yunuen; Hollis, Edmund | Neuroscience insights | 38680210 | 2024 |
| Immunometabolism of CD8+ T cell differentiation in cancer. | Shi, Hao; Chen, Sidi; Chi, Hongbo | Trends in cancer | 38693002 | 2024 Jul |
| Changes in depressive symptoms and antibody production following influenza vaccination in adolescents and adults. | Ehrlich, Katherine B; Lyle, Sarah M; Corallo, Kelsey L; Lavner, Justin A; Ross, Ted M | Vaccine | 38702230 | 2024 Jun 11 |
| Improved specificity and efficacy of base-editing therapies with hybrid guide RNAs. | Whittaker, Madelynn N; Brooks, Dominique L; Quigley, Aidan; Jindal, Ishaan; Said, Hooda; Qu, Ping; Wang, Josh Zhiyong; Ahrens-Nicklas, Rebecca C; Musunuru, Kiran; Alameh, Mohamad-Gabriel; Peranteau, William H; Wang, Xiao | bioRxiv : the preprint server for biology | 38712058 | 2024 Jun 16 |
| Cell-free assays reveal the HIV-1 capsid protects reverse transcripts from cGAS. | Scott, Tiana M; Arnold, Lydia M; Powers, Jordan A; McCann, Delaney A; Christensen, Devin E; Pereira, Miguel J; Zhou, Wen; Torrez, Rachel M; Iwasa, Janet H; Kranzusch, Philip J; Sundquist, Wesley I; Johnson, Jarrod S | bioRxiv : the preprint server for biology | 38712059 | 2024 May 10 |
| Cryogenic electron tomography reveals novel structures in the apical complex of Plasmodium falciparum. | Sun, Stella Y; Segev-Zarko, Li-Av; Pintilie, Grigore D; Kim, Chi Yong; Staggers, Sophia R; Schmid, Michael F; Egan, Elizabeth S; Chiu, Wah; Boothroyd, John C | mBio | 38456679 | 2024 Apr 10 |
| Impaired polyamine metabolism causes behavioral and neuroanatomical defects in a mouse model of Snyder-Robinson syndrome. | Akinyele, Oluwaseun; Munir, Anushe; Johnson, Marie A; Perez, Megan S; Gao, Yuan; Foley, Jackson R; Nwafor, Ashley; Wu, Yijen; Murray-Stewart, Tracy; Casero Jr, Robert A; Bayir, Hülya; Kemaladewi, Dwi U | Disease models & mechanisms | 38463005 | 2024 Jun 01 |
| Acetylcholine demixes heterogeneous dopamine signals for learning and moving. | Jang, Hee Jae; Ward, Royall McMahon; Golden, Carla E M; Constantinople, Christine M | bioRxiv : the preprint server for biology | 38746300 | 2024 May 04 |
| Recombinant manufacturing of multispecies biolubricants. | Colville, Marshall J; Huang, Ling-Ting; Schmidt, Samuel; Chen, Kevin; Vishwanath, Karan; Su, Jin; Williams, Rebecca M; Bonassar, Lawrence J; Reesink, Heidi L; Paszek, Matthew J | bioRxiv : the preprint server for biology | 38746339 | 2024 May 05 |
| Daily social comparisons among women in midlife with elevated risk for cardiovascular disease: A within-person test of the identification/contrast model. | Baga, Kiri; Salvatore, Gabrielle M; Bercovitz, Iris; Mogle, Jacqueline A; Arigo, Danielle | Applied psychology. Health and well-being | 38785210 | 2024 May 24 |
| EGFR-targeted ionizable lipid nanoparticles enhance in vivo mRNA delivery to the placenta. | Geisler, Hannah C; Ghalsasi, Aditi A; Safford, Hannah C; Swingle, Kelsey L; Thatte, Ajay S; Mukalel, Alvin J; Gong, Ningqiang; Hamilton, Alex G; Han, Emily L; Nachod, Benjamin E; Padilla, Marshall S; Mitchell, Michael J | Journal of controlled release : official journal of the Controlled Release Society | 38789090 | 2024 Jul |
| Y chromosome linked UTY modulates sex differences in valvular fibroblast methylation in response to nanoscale extracellular matrix cues. | Gorashi, Rayyan M; Baddour, Talia; Chittle, Sarah J; Vélez, Nicole E Félix; Wenning, Michaela A; Anseth, Kristi S; Mestroni, Luisa; Peña, Brisa; Guo, Peng; Aguado, Brian A | bioRxiv : the preprint server for biology | 38798394 | 2024 Aug 19 |
| Identification of Fasnall as a therapeutically effective Complex I inhibitor. | Mukha, Dzmitry; Dessain, Jena; O'Connor, Seamus; Pniewski, Katherine; Bertolazzi, Fabrizio; Patel, Jeet; Mullins, Mary; Schug, Zachary T | bioRxiv : the preprint server for biology | 38766222 | 2024 May 06 |
| Glucose restriction in antiviral defence. | Goldberg, Emily L | Nature immunology | 38811817 | 2024 Jun |
| CRASH2p: Closed-loop Two Photon Imaging in Freely Moving Animals. | McNulty, Paul; Wu, Rui; Yamaguchi, Akihiro; Heckscher, Ellie S; Haas, Andrew; Nwankpa, Amajindi; Skanata, Mirna Mihovilovic; Gershow, Marc | bioRxiv : the preprint server for biology | 38826435 | 2024 Jun 10 |
| An ultrathin membrane mediates tissue-specific morphogenesis and barrier function in a human kidney chip. | Mou, Xingrui; Shah, Jessica; Roye, Yasmin; Du, Carolyn; Musah, Samira | Science advances | 38838141 | 2024 Jun 07 |
| Exploring the potential of cell-derived vesicles for transient delivery of gene editing payloads. | Leandro, Kevin; Rufino-Ramos, David; Breyne, Koen; Di Ianni, Emilio; Lopes, Sara M; Jorge Nobre, Rui; Kleinstiver, Benjamin P; Perdigão, Pedro R L; Breakefield, Xandra O; Pereira de Almeida, Luís | Advanced drug delivery reviews | 38849005 | 2024 Aug |
| Membrane-induced 2D phase separation of the focal adhesion protein talin. | Litschel, Thomas; Kelley, Charlotte F; Cheng, Xiaohang; Babl, Leon; Mizuno, Naoko; Case, Lindsay B; Schwille, Petra | Nature communications | 38862544 | 2024 Jun 11 |
| Metabolic inflexibility promotes mitochondrial health during liver regeneration. | Wang, Xun; Menezes, Cameron J; Jia, Yuemeng; Xiao, Yi; Venigalla, Siva Sai Krishna; Cai, Feng; Hsieh, Meng-Hsiung; Gu, Wen; Du, Liming; Sudderth, Jessica; Kim, Dohun; Shelton, Spencer D; Llamas, Claire B; Lin, Yu-Hsuan; Zhu, Min; Merchant, Salma; Bezwada, Divya; Kelekar, Sherwin; Zacharias, Lauren G; Mathews, Thomas P; Hoxhaj, Gerta; Wynn, R Max; Tambar, Uttam K; DeBerardinis, Ralph J; Zhu, Hao; Mishra, Prashant | Science (New York, N.Y.) | 38870309 | 2024 Jun 14 |
| Discovery and Characterization of Two Folded Intermediates for Outer Membrane Protein TolC Biogenesis. | Ikujuni, Ayotunde Paul; Dhar, Rik; Cordova, Andres; Bowman, Alexander M; Noga, Sarah; Slusky, Joanna S G | Journal of molecular biology | 38871177 | 2024 Aug 15 |
| Proteomic analysis of human sperm reveals changes in protamine 1 phosphorylation in men with infertility. | Schon, Samantha B; Moritz, Lindsay; Rabbani, Mashiat; Meguid, Julia; Juliano, Brock R; Ruotolo, Brandon T; Aston, Kenneth; Hammoud, Saher Sue | F&S science | 38065301 | 2024 May |
| Distinct catecholaminergic pathways projecting to hippocampal CA1 transmit contrasting signals during navigation in familiar and novel environments. | Heer, Chad M; Sheffield, Mark E J | bioRxiv : the preprint server for biology | 38076843 | 2024 Jul 24 |
| Cortical reactivations predict future sensory responses. | Nguyen, Nghia D; Lutas, Andrew; Amsalem, Oren; Fernando, Jesseba; Ahn, Andy Young-Eon; Hakim, Richard; Vergara, Josselyn; McMahon, Justin; Dimidschstein, Jordane; Sabatini, Bernardo L; Andermann, Mark L | Nature | 38093002 | 2024 Jan |
| Stretch response of the mechano-gated channel TMEM63A in membrane patches and single cells. | Niloy, Sayeman Islam; Strege, Peter R; Hannan, Elizabeth C; Cowan, Luke M; Linsenmeier, Fabian; Friedrich, Oliver; Farrugia, Gianrico; Beyder, Arthur | American journal of physiology. Cell physiology | 38189136 | 2024 Feb 01 |
| Alternative mRNA splicing events and regulators in epidermal differentiation. | Takashima, Shota; Sun, Wujianan; Otten, Auke B C; Cai, Pengfei; Peng, Shaohong Isaac; Tong, Elton; Bui, Jolina; Mai, McKenzie; Amarbayar, Oyumergen; Cheng, Binbin; Odango, Rowen Jane; Li, Zongkai; Qu, Kun; Sun, Bryan K | Cell reports | 38402585 | 2024 Mar 26 |
| Using structure prediction of negative sense RNA virus nucleoproteins to assess evolutionary relationships. | Sabsay, Kimberly R; Te Velthuis, Aartjan J W | bioRxiv : the preprint server for biology | 38405982 | 2024 May 22 |
| Smart lattice light-sheet microscopy for imaging rare and complex cellular events. | Shi, Yu; Tabet, Jimmy S; Milkie, Daniel E; Daugird, Timothy A; Yang, Chelsea Q; Ritter, Alex T; Giovannucci, Andrea; Legant, Wesley R | Nature methods | 38167656 | 2024 Feb |
| Design automation of microfluidic single and double emulsion droplets with machine learning. | Lashkaripour, Ali; McIntyre, David P; Calhoun, Suzanne G K; Krauth, Karl; Densmore, Douglas M; Fordyce, Polly M | Nature communications | 38167827 | 2024 Jan 02 |
| Emergence of nanoscale viscoelasticity from single cancer cells to established tumors. | Hadzipasic, Muhamed; Zhang, Sue; Huang, Zhuoying; Passaro, Rachel; Sten, Margaret S; Shankar, Ganesh M; Nia, Hadi T | Biomaterials | 38169188 | 2024 Mar |
| Single-cell transcriptomic analyses reveal distinct immune cell contributions to epithelial barrier dysfunction in checkpoint inhibitor colitis. | Thomas, Molly Fisher; Slowikowski, Kamil; Manakongtreecheep, Kasidet; Sen, Pritha; Samanta, Nandini; Tantivit, Jessica; Nasrallah, Mazen; Zubiri, Leyre; Smith, Neal P; Tirard, Alice; Ramesh, Swetha; Arnold, Benjamin Y; Nieman, Linda T; Chen, Jonathan H; Eisenhaure, Thomas; Pelka, Karin; Song, Yuhui; Xu, Katherine H; Jorgji, Vjola; Pinto, Christopher J; Sharova, Tatyana; Glasser, Rachel; Chan, PuiYee; Sullivan, Ryan J; Khalili, Hamed; Juric, Dejan; Boland, Genevieve M; Dougan, Michael; Hacohen, Nir; Li, Bo; Reynolds, Kerry L; Villani, Alexandra-Chloé | Nature medicine | 38724705 | 2024 May |
| Ionizable lipid nanoparticles for RAS protease delivery to inhibit cancer cell proliferation. | Atsavapranee, Ella; Haley, Rebecca M; Billingsley, Margaret M; Chan, Alexander; Ruan, Biao; Figueroa-Espada, Christian G; Gong, Ningqiang; Mukalel, Alvin J; Bryan, Philip N; Mitchell, Michael J | Journal of controlled release : official journal of the Controlled Release Society | 38729436 | 2024 Jun |
| Inorganic Biomaterials Shape the Transcriptome Profile to Induce Endochondral Differentiation. | Murali, Aparna; Brokesh, Anna M; Cross, Lauren M; Kersey, Anna L; Jaiswal, Manish K; Singh, Irtisha; Gaharwar, Akhilesh | Advanced science (Weinheim, Baden-Wurttemberg, Germany) | 38738803 | 2024 Aug |
| Inferring Stochastic Rates from Heterogeneous Snapshots of Particle Positions. | Miles, Christopher E; McKinley, Scott A; Ding, Fangyuan; Lehoucq, Richard B | Bulletin of mathematical biology | 38740619 | 2024 May 13 |
| Genome-wide CRISPR screens in spheroid culture reveal that the tumor suppressor LKB1 inhibits growth via the PIKFYVE lipid kinase. | Ferrarone, John R; Thomas, Jerin; Unni, Arun M; Zheng, Yuxiang; Nagiec, Michal J; Gardner, Eric E; Mashadova, Oksana; Li, Kate; Koundouros, Nikos; Montalbano, Antonino; Mustafa, Meer; Cantley, Lewis C; Blenis, John; Sanjana, Neville E; Varmus, Harold | Proceedings of the National Academy of Sciences of the United States of America | 38743625 | 2024 May 21 |
| Keratin 17 modulates the immune topography of pancreatic cancer. | Delgado-Coka, Lyanne A; Horowitz, Michael; Torrente-Goncalves, Mariana; Roa-Peña, Lucia; Leiton, Cindy V; Hasan, Mahmudul; Babu, Sruthi; Fassler, Danielle; Oentoro, Jaymie; Karen Bai, Ji-Dong; Petricoin, Emanuel F; Matrisian, Lynn M; Blais, Edik Matthew; Marchenko, Natalia; Allard, Felicia D; Jiang, Wei; Larson, Brent; Hendifar, Andrew; Chen, Chao; Abousamra, Shahira; Samaras, Dimitris; Kurc, Tahsin; Saltz, Joel; Escobar-Hoyos, Luisa F; Shroyer, Kenneth | Research square | 38464123 | 2024 Feb 20 |
| Non-linear transcriptional responses to gradual modulation of transcription factor dosage. | Domingo, Júlia; Minaeva, Mariia; Morris, John A; Ghatan, Sam; Ziosi, Marcello; Sanjana, Neville E; Lappalainen, Tuuli | bioRxiv : the preprint server for biology | 38464330 | 2024 Aug 06 |
| Cell morphology best predicts tumorigenicity and metastasis in vivo across multiple TNBC cell lines of different metastatic potential. | Conner, Sydney J; Guarin, Justinne R; Le, Thanh T; Fatherree, Jackson P; Kelley, Charlotte; Payne, Samantha L; Parker, Savannah R; Bloomer, Hanan; Zhang, Crystal; Salhany, Kenneth; McGinn, Rachel A; Henrich, Emily; Yui, Anna; Srinivasan, Deepti; Borges, Hannah; Oudin, Madeleine J | Breast cancer research : BCR | 38468326 | 2024 Mar 11 |
| The emerging role of extracellular vesicles in bronchopulmonary dysplasia. | Ransom, Meaghan A; Blatt, Alexander M; Pua, Heather H; Sucre, Jennifer M S | American journal of physiology. Lung cellular and molecular physiology | 38469633 | 2024 May 01 |
| Dysregulation of transcriptional condensates in human disease: mechanisms, biological functions, and open questions. | Mathias, Kaeli M; Liu, Yiman; Wan, Liling | Current opinion in genetics & development | 38788489 | 2024 Jun |
| A new lineage nomenclature to aid genomic surveillance of dengue virus. | Hill, Verity; Cleemput, Sara; Fonseca, Vagner; Tegally, Houriiyah; Brito, Anderson F; Gifford, Robert; Tran, Vi Thuy; Kien, Duong Thi Hue; Huynh, Tuyen; Yacoub, Sophie; Dieng, Idrissa; Ndiaye, Mignane; Balde, Diamilatou; Diagne, Moussa M; Faye, Oumar; Salvato, Richard; Wallau, Gabriel Luz; Gregianini, Tatiana S; Godinho, Fernanda M S; Vogels, Chantal B F; Breban, Mallery I; Leguia, Mariana; Jagtap, Suraj; Roy, Rahul; Hapuarachchi, Chanditha; Mwanyika, Gaspary; Giovanetti, Marta; Alcantara, Luiz C J; Faria, Nuno R; Carrington, Christine V F; Hanley, Kathryn A; Holmes, Edward C; Dumon, Wim; de Oliveira, Tulio; Grubaugh, Nathan D | medRxiv : the preprint server for health sciences | 38798319 | 2024 May 17 |
| Resurgence of Dengue in the Era of Genomic Surveillance and Vaccines. | Huits, Ralph; Grubaugh, Nathan D; Libman, Michael; Hamer, Davidson H | Annals of internal medicine | 38498879 | 2024 May |
| Visualization of Engineered M13 Phages Bound to Bacterial Targets by Transmission Electron Microscopy. | Yang, Yanxi; Chen, Irene A | Methods in molecular biology (Clifton, N.J.) | 38526731 | 2024 |
| Synaptotagmin 7 docks synaptic vesicles to support facilitation and Doc2α-triggered asynchronous release. | Wu, Zhenyong; Kusick, Grant F; Berns, Manon M M; Raychaudhuri, Sumana; Itoh, Kie; Walter, Alexander M; Chapman, Edwin R; Watanabe, Shigeki | eLife | 38536730 | 2024 Mar 27 |
| Identifying Distinct Neural Features between the Initial and Corrective Phases of Precise Reaching Using AutoLFADS. | Lee, Wei-Hsien; Karpowicz, Brianna M; Pandarinath, Chethan; Rouse, Adam G | The Journal of neuroscience : the official journal of the Society for Neuroscience | 38538142 | 2024 May 15 |
| Age-related dysregulation of the retinal transcriptome in African turquoise killifish. | Bergmans, Steven; Noel, Nicole C L; Masin, Luca; Harding, Ellen G; Krzywańska, Aleksandra M; De Schutter, Julie D; Ayana, Rajagopal; Hu, Chi-Kuo; Arckens, Lut; Ruzycki, Philip A; MacDonald, Ryan B; Clark, Brian S; Moons, Lieve | bioRxiv : the preprint server for biology | 38559206 | 2024 Mar 11 |
| Agent-based modeling of stress anisotropy driven nematic ordering in growing biofilms. | Li, Changhao; Nijjer, Japinder; Feng, Luyi; Zhang, Qiuting; Yan, Jing; Zhang, Sulin | Soft matter | 38563244 | 2024 Apr 24 |
| Protein-Based Tools for Studying Neuromodulation. | Wang, Wenjing | ACS chemical biology | 38581649 | 2024 Apr 19 |
| Hierarchal single-cell lineage tracing reveals differential fate commitment of CD8 T-cell clones in response to acute infection. | Abdullah, Leena; Emiliani, Francesco E; Vaidya, Chinmay M; Stuart, Hannah; Kolling, Fred W; Ackerman, Margaret E; Song, Li; McKenna, Aaron; Huang, Yina H | bioRxiv : the preprint server for biology | 38585810 | 2024 Mar 27 |
| An inhibitory acetylcholine receptor gates context dependent mechanosensory processing in C. elegans. | Kumar, Sandeep; Sharma, Anuj K; Leifer, Andrew M | bioRxiv : the preprint server for biology | 38585821 | 2024 Mar 27 |
| Rapid structural analysis of bacterial ribosomes in situ. | Powell, Barrett M; Brant, Tyler S; Davis, Joseph H; Mosalaganti, Shyamal | bioRxiv : the preprint server for biology | 38585831 | 2024 Mar 26 |
| Establishing Primary and Stable Cell Lines from Frozen Wing Biopsies for Cellular, Physiological, and Genetic Studies in Bats. | Deng, Fengyan; Morales-Sosa, Pedro; Bernal-Rivera, Andrea; Wang, Yan; Tsuchiya, Dai; Javier, Jose Emmanuel; Rohner, Nicolas; Zhao, Chongbei; Camacho, Jasmin | bioRxiv : the preprint server for biology | 38585913 | 2024 Mar 27 |
| A fluorogenic complementation tool kit for interrogating lipid droplet-organelle interaction. | Li, Xiao; Gamuyao, Rico; Wu, Ming-Lun; Cho, Woo Jung; King, Sharon V; Petersen, R A; Stabley, Daniel R; Lindow, Caleb; Climer, Leslie K; Shirinifard, Abbas; Ferrara, Francesca; Throm, Robert E; Robinson, Camenzind G; Zhou, Yiwang; Carisey, Alexandre F; Tebo, Alison G; Chang, Chi-Lun | The Journal of cell biology | 38949658 | 2024 Sep 02 |
| Enhancing in situ cancer vaccines using delivery technologies. | Gong, Ningqiang; Alameh, Mohamad-Gabriel; El-Mayta, Rakan; Xue, Lulu; Weissman, Drew; Mitchell, Michael J | Nature reviews. Drug discovery | 38951662 | 2024 Aug |
| Engineering human midbrain organoid microphysiological systems to model prenatal PFOS exposure. | Tian, Chunhui; Cai, Hongwei; Ao, Zheng; Gu, Longjun; Li, Xiang; Niu, Vivian C; Bondesson, Maria; Gu, Mingxia; Mackie, Ken; Guo, Feng | The Science of the total environment | 38964381 | 2024 Oct 15 |
| Sex and gender differences in cognitive resilience to aging and Alzheimer's disease. | Arenaza-Urquijo, Eider M; Boyle, Rory; Casaletto, Kaitlin; Anstey, Kaarin J; Vila-Castelar, Clara; Colverson, Aaron; Palpatzis, Eleni; Eissman, Jaclyn M; Kheng Siang Ng, Ted; Raghavan, Sheelakumari; Akinci, Muge; Vonk, Jet M J; Machado, Luiza S; Zanwar, Preeti P; Shrestha, Hom L; Wagner, Maude; Tamburin, Stefano; Sohrabi, Hamid R; Loi, Samantha; Bartrés-Faz, David; Dubal, Dena B; Vemuri, Prashanthi; Okonkwo, Ozioma; Hohman, Timothy J; Ewers, Michael; Buckley, Rachel F; Reserve, Resilience and Protective Factors Professional Interest Area, Sex and Gender Professional Interest area and the ADDRESS! Special Interest Group | Alzheimer's & dementia : the journal of the Alzheimer's Association | 38967222 | 2024 Aug |
| Neuropathologically-directed profiling of PRNP somatic and germline variants in sporadic human prion disease. | McDonough, Gannon A; Cheng, Yuchen; Morillo, Katherine; Doan, Ryan N; Kenny, Connor J; Foutz, Aaron; Kim, Chae; Cohen, Mark L; Appleby, Brian S; Walsh, Christopher A; Safar, Jiri G; Huang, August Yue; Miller, Michael B | bioRxiv : the preprint server for biology | 38979287 | 2024 Jun 29 |
| In silico screening identifies SHPRH as a novel nucleosome acidic patch interactor. | James, Allison M; Schmid, Ernst W; Walter, Johannes C; Farnung, Lucas | bioRxiv : the preprint server for biology | 38979307 | 2024 Jun 27 |
| Ancestral Sequence Reconstruction as a Tool to Detect and Study De Novo Gene Emergence. | Vakirlis, Nikolaos; Acar, Omer; Cherupally, Vijay; Carvunis, Anne-Ruxandra | Genome biology and evolution | 39004885 | 2024 Aug 05 |
| Postprandial sleep in short-sleeping Mexican cavefish. | Gallman, Kathryn; Rastogi, Aakriti; North, Owen; O'Gorman, Morgan; Hutton, Pierce; Lloyd, Evan; Warren, Wes; Kowalko, Johanna E; Duboue, Erik R; Rohner, Nicolas; Keene, Alex C | bioRxiv : the preprint server for biology | 39005273 | 2024 Jul 05 |
| Detecting branching rate heterogeneity in multifurcating trees with applications in lineage tracing data. | Gao, Yingnan; Feder, Alison F | bioRxiv : the preprint server for biology | 39005367 | 2024 Aug 06 |
| Single-cell multiomics reveals ENL mutation perturbs kidney developmental trajectory by rewiring gene regulatory landscape. | Song, Lele; Li, Qinglan; Xia, Lingbo; Sahay, Arushi Eesha; Qiu, Qi; Li, Yuanyuan; Li, Haitao; Sasaki, Kotaro; Susztak, Katalin; Wu, Hao; Wan, Liling | Nature communications | 39009564 | 2024 Jul 15 |
| Multi-omics analysis of green lineage osmotic stress pathways unveils crucial roles of different cellular compartments. | Vilarrasa-Blasi, Josep; Vellosillo, Tamara; Jinkerson, Robert E; Fauser, Friedrich; Xiang, Tingting; Minkoff, Benjamin B; Wang, Lianyong; Kniazev, Kiril; Guzman, Michael; Osaki, Jacqueline; Barrett-Wilt, Gregory A; Sussman, Michael R; Jonikas, Martin C; Dinneny, José R | Nature communications | 39013881 | 2024 Jul 16 |
| Cryopreservation of human kidney organoids. | Mashouf, Parham; Tabibzadeh, Nahid; Kuraoka, Shohei; Oishi, Haruka; Morizane, Ryuji | Cellular and molecular life sciences : CMLS | 39023560 | 2024 Jul 18 |
| Development of neural circuits for social motion perception in schooling fish. | Zada, David; Schulze, Lisanne; Yu, Jo-Hsien; Tarabishi, Princess; Napoli, Julia L; Milan, Jimjohn; Lovett-Barron, Matthew | Current biology : CB | 39025069 | 2024 Aug 05 |
| Unsupervised representation learning of chromatin images identifies changes in cell state and tissue organization in DCIS. | Zhang, Xinyi; Venkatachalapathy, Saradha; Paysan, Daniel; Schaerer, Paulina; Tripodo, Claudio; Uhler, Caroline; Shivashankar, G V | Nature communications | 39030176 | 2024 Jul 20 |
| Optimized microfluidic formulation and organic excipients for improved lipid nanoparticle mediated genome editing. | Palanki, Rohan; Han, Emily L; Murray, Amanda M; Maganti, Rohin; Tang, Sophia; Swingle, Kelsey L; Kim, Dongyoon; Yamagata, Hannah; Safford, Hannah C; Mrksich, Kaitlin; Peranteau, William H; Mitchell, Michael J | Lab on a chip | 39037068 | 2024 Aug 06 |
| Neural activity ramps in frontal cortex signal extended motivation during learning. | Regalado, Josue M; Corredera Asensio, Ariadna; Haunold, Theresa; Toader, Andrew C; Li, Yan Ran; Neal, Lauren A; Rajasethupathy, Priyamvada | eLife | 39037775 | 2024 Jul 22 |
| Click editing enables programmable genome writing using DNA polymerases and HUH endonucleases. | Ferreira da Silva, Joana; Tou, Connor J; King, Emily M; Eller, Madeline L; Rufino-Ramos, David; Ma, Linyuan; Cromwell, Christopher R; Metovic, Jasna; Benning, Friederike M C; Chao, Luke H; Eichler, Florian S; Kleinstiver, Benjamin P | Nature biotechnology | 39039307 | 2024 Jul 22 |
| SARS-CoV-2 spike does not interact with the T cell receptor or directly activate T cells. | Gaglione, Stephanie A; Rosales, Tatiana J; Schmidt-Hong, Laura; Baker, Brian M; Birnbaum, Michael E | Proceedings of the National Academy of Sciences of the United States of America | 39042676 | 2024 Jul 30 |
| Left Frontoparietal Control Network Connectivity Moderates the Effect of Amyloid on Cognitive Decline in Preclinical Alzheimer's Disease: The A4 Study. | Boyle, R; Klinger, H M; Shirzadi, Z; Coughlan, G T; Seto, M; Properzi, M J; Townsend, D L; Yuan, Z; Scanlon, C; Jutten, R J; Papp, K V; Amariglio, R E; Rentz, D M; Chhatwal, J P; Donohue, M C; Sperling, R A; Schultz, A P; Buckley, R F | The journal of prevention of Alzheimer's disease | 39044497 | 2024 |
| A sequence of SVA retrotransposon insertions in ASIP shaped human pigmentation. | Kamitaki, Nolan; Hujoel, Margaux L A; Mukamel, Ronen E; Gebara, Edward; McCarroll, Steven A; Loh, Po-Ru | Nature genetics | 39048794 | 2024 Aug |
| Agar and agarose used for Staphylococcus aureus biofilm cultivation impact fluoroquinolone tolerance. | Power, Angela D; Mok, Wendy W K | Journal of applied microbiology | 39066496 | 2024 Aug 05 |
| Cryo-EM confirms a common fibril fold in the heart of four patients with ATTRwt amyloidosis. | Nguyen, Binh An; Singh, Virender; Afrin, Shumaila; Singh, Preeti; Pekala, Maja; Ahmed, Yasmin; Pedretti, Rose; Canepa, Jacob; Lemoff, Andrew; Kluve-Beckerman, Barbara; Wydorski, Pawel M; Chhapra, Farzeen; Saelices, Lorena | Communications biology | 39068302 | 2024 Jul 27 |
| 2023-24 dengue outbreak in Valle del Cauca, Colombia caused by multiple virus serotypes and lineages. | Grubaugh, Nathan D; Torres-Hernández, Daniela; Murillo-Ortiz, Mónica A; Dávalos, Diana M; Lopez, Pio; Hurtado, Isabel C; Breban, Mallery I; Bourgikos, Ellie; Hill, Verity; López-Medina, Eduardo | medRxiv : the preprint server for health sciences | 39072046 | 2024 Jul 18 |
| Multi-species genome-wide CRISPR screens identify conserved suppressors of cold-induced cell death. | Lam, Breanna; Kajderowicz, Kathrin M; Keys, Heather R; Roessler, Julian M; Frenkel, Evgeni M; Kirkland, Adina; Bisht, Punam; El-Brolosy, Mohamed A; Jaenisch, Rudolf; Bell, George W; Weissman, Jonathan S; Griffith, Eric C; Hrvatin, Sinisa | bioRxiv : the preprint server for biology | 39091747 | 2024 Sep 06 |
| Prediction of protein subcellular localization in single cells. | Zhang, Xinyi; Tseo, Yitong; Bai, Yunhao; Chen, Fei; Uhler, Caroline | bioRxiv : the preprint server for biology | 39091825 | 2024 Jul 25 |
| Sensitive Detection of Structural Differences using a Statistical Framework for Comparative Crystallography. | Hekstra, Doeke R; Wang, Harrison K; Klureza, Margaret A; Greisman, Jack B; Dalton, Kevin M | bioRxiv : the preprint server for biology | 39091831 | 2024 Jul 23 |
| Broad-spectrum antibiotics disrupt homeostatic efferocytosis. | Saavedra, Pedro H V; Trzeciak, Alissa J; Lipshutz, Allie; Daman, Andrew W; O'Neal, Anya J; Liu, Zong-Lin; Wang, Zhaoquan; Romero-Pichardo, Jesús E; Rojas, Waleska Saitz; Zago, Giulia; van den Brink, Marcel R M; Josefowicz, Steven Z; Lucas, Christopher D; Anderson, Christopher J; Rudensky, Alexander Y; Perry, Justin S A | Nature metabolism | 39122784 | 2024 Sep |
| Conservation, alteration, and redistribution of mammalian striatal interneurons. | Corrigan, Emily K; DeBerardine, Michael; Poddar, Aunoy; Turrero García, Miguel; Schmitz, Matthew T; Harwell, Corey C; Paredes, Mercedes F; Krienen, Fenna M; Pollen, Alex A | bioRxiv : the preprint server for biology | 39131311 | 2024 Jul 29 |
| A hippocampal circuit mechanism to balance memory reactivation during sleep. | Karaba, Lindsay A; Robinson, Heath L; Harvey, Ryan E; Chen, Weiwei; Fernandez-Ruiz, Antonio; Oliva, Azahara | Science (New York, N.Y.) | 39146421 | 2024 Aug 16 |
| Optics-free Spatial Genomics for Mapping Mouse Brain Aging. | Abdulraouf, Abdulraouf; Jiang, Weirong; Xu, Zihan; Zhang, Zehao; Isakov, Samuel; Raihan, Tanvir; Zhou, Wei; Cao, Junyue | bioRxiv : the preprint server for biology | 39149282 | 2024 Aug 08 |
| Scalable spatial single-cell transcriptomics and translatomics in 3D thick tissue blocks. | Sui, Xin; Lo, Jennifer A; Luo, Shuchen; He, Yichun; Tang, Zefang; Lin, Zuwan; Zhou, Yiming; Wang, Wendy Xueyi; Liu, Jia; Wang, Xiao | bioRxiv : the preprint server for biology | 39149316 | 2024 Aug 08 |
| Molecular and circuit determinants in the globus pallidus mediating control of cocaine-induced behavioral plasticity. | Tian, Guilian; Bartas, Katrina; Hui, May; Chen, Lingxuan; Vasquez, Jose J; Azouz, Ghalia; Derdeyn, Pieter; Manville, Rían W; Ho, Erick L; Fang, Amanda S; Li, Yuan; Tyler, Isabella; Setola, Vincent; Aoto, Jason; Abbott, Geoffrey W; Beier, Kevin T | Neuron | 39153478 | 2024 Aug 14 |
| Inference for treatment-specific survival curves using machine learning. | Westling, Ted; Luedtke, Alex; Gilbert, Peter B; Carone, Marco | Journal of the American Statistical Association | 39184837 | 2024 |
| Lab-on-a-lollipop (LoL) platform for preventing food-induced toxicity: all-in-one system for saliva sampling and electrochemical detection of vanillin. | Ma, Haozheng; Khazaee Nejad, Sina; Vargas Ramos, Daniel; Al-Shami, Abdulrahman; Soleimani, Ali; Amirghasemi, Farbod; Mohamed, Mona A; Mousavi, Maral P S | Lab on a chip | 39207360 | 2024 Sep 10 |
| Low-cost and scalable projected light-sheet microscopy for the high-resolution imaging of cleared tissue and living samples. | Chen, Yannan; Chauhan, Shradha; Gong, Cheng; Dayton, Hannah; Xu, Cong; De La Cruz, Estanislao Daniel; Tsai, Yu-Young Wesley; Datta, Malika S; Rosoklija, Gorazd B; Dwork, Andrew J; Mann, J John; Boldrini, Maura; Leong, Kam W; Dietrich, Lars E P; Tomer, Raju | Nature biomedical engineering | 39209948 | 2024 Aug 29 |
| Engineered human iPS cell models reveal altered podocytogenesis and glomerular capillary wall in CHD-associated SMAD2 mutations. | Bhattacharya, Rohan; Ward, Tarsha; Kalejaiye, Titilola D; Mishra, Alekshyander; Leeman, Sophia; Arzaghi, Hamidreza; Seidman, Jonathan G; Seidman, Christine E; Musah, Samira | bioRxiv : the preprint server for biology | 39211233 | 2024 Aug 06 |
| Restraint of melanoma progression by cells in the local skin environment. | Ma, Yilun; Tagore, Mohita; Hunter, Miranda V; Huang, Ting-Hsiang; Montal, Emily; Weiss, Joshua M; White, Richard M | bioRxiv : the preprint server for biology | 39229155 | 2024 Aug 19 |
| Small LEA proteins mitigate air-water interface damage to fragile cryo-EM samples during plunge freezing. | Abe, Kaitlyn M; Li, Gan; He, Qixiang; Grant, Timothy; Lim, Ci Ji | Nature communications | 39231985 | 2024 Sep 04 |
| Simultaneous interneuron labeling reveals cell type-specific, population-level interactions in cortex. | Potter, Christian T; Bassi, Constanza D; Runyan, Caroline A | iScience | 39280622 | 2024 Sep 20 |
| Flexible Acetylcholine Neural Probe with a Hydrophobic Laser-Induced Graphene Electrode and a Fluorous-Phase Sensing Membrane. | Amirghasemi, Farbod; Al-Shami, Abdulrahman; Ushijima, Kara; Mousavi, Maral P S | ACS materials letters | 39309214 | 2024 Sep 02 |
| Differences in Beliefs About Suicide by Occupation in a Representative Sample of Adults in the United States, General Social Survey 2002-2021. | Blosnich, John R; Haydinger, Alexandra M; Rhoades, Harmony; De Luca, Susan M | Archives of suicide research : official journal of the International Academy for Suicide Research | 36916390 | 2024 |
| Dissociable contributions of the amygdala and ventral hippocampus to stress-induced changes in defensive behavior. | Pennington, Zachary T; LaBanca, Alexa R; Sompolpong, Patlapa; Abdel-Raheim, Shereen D; Ko, Bumjin; Christenson Wick, Zoe; Feng, Yu; Dong, Zhe; Francisco, Taylor R; Bacon, Madeline E; Chen, Lingxuan; Fulton, Sasha L; Maze, Ian; Shuman, Tristan; Cai, Denise Jade | bioRxiv : the preprint server for biology | 36945605 | 2024 May 08 |
| Microglia cannibalism and efferocytosis leads to shorter lifespans of developmental microglia. | Gordon, Hannah; Schafer, Zachary; Smith, Cody J | bioRxiv : the preprint server for biology | 36993267 | 2024 Aug 29 |
| Fetal gene therapy. | Waddington, Simon N; Peranteau, William H; Rahim, Ahad A; Boyle, Ashley K; Kurian, Manju A; Gissen, Paul; Chan, Jerry K Y; David, Anna L | Journal of inherited metabolic disease | 37470194 | 2024 Jan |
| Neurobiology and treatment advances for prolonged grief disorder. | Donaldson, Zoe R; Shear, M Katherine | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | 37479860 | 2024 Jan |
| Oligomeric organization of membrane proteins from native membranes at nanoscale spatial and single-molecule resolution. | Walker, Gerard; Brown, Caroline; Ge, Xiangyu; Kumar, Shailesh; Muzumdar, Mandar D; Gupta, Kallol; Bhattacharyya, Moitrayee | Nature nanotechnology | 38012273 | 2024 Jan |
| Neuronal "parts list" and wiring diagram for a visual system. | Matsliah, Arie; Yu, Szi-Chieh; Kruk, Krzysztof; Bland, Doug; Burke, Austin; Gager, Jay; Hebditch, James; Silverman, Ben; Willie, Kyle; Willie, Ryan W; Sorek, Marissa; Sterling, Amy R; Kind, Emil; Garner, Dustin; Sancer, Gizem; Wernet, Mathias F; Kim, Sung Soo; Murthy, Mala; Seung, H Sebastian; FlyWire Consortium | bioRxiv : the preprint server for biology | 37873160 | 2024 Apr 15 |
| Intraoperative application and early experience with novel high-resolution, high-channel-count thin-film electrodes for human microelectrocorticography. | Tan, Hao; Paulk, Angelique C; Stedelin, Brittany; Cleary, Daniel R; Nerison, Caleb; Tchoe, Youngbin; Brown, Erik C; Bourhis, Andrew; Russman, Samantha; Lee, Jihwan; Tonsfeldt, Karen J; Yang, Jimmy C; Oh, Hongseok; Ro, Yun Goo; Lee, Keundong; Ganji, Mehran; Galton, Ian; Siler, Dominic; Han, Seunggu Jude; Collins, Kelly L; Ben-Haim, Sharona; Halgren, Eric; Cash, Sydney S; Dayeh, Shadi; Raslan, Ahmed M | Journal of neurosurgery | 37874692 | 2024 Mar 01 |
| Integrating innate and adaptive immunity in oncolytic virus therapy. | DePeaux, Kristin; Delgoffe, Greg M | Trends in cancer | 37880008 | 2024 Feb |
| Substrate stiffness modulates cardiac fibroblast activation, senescence, and proinflammatory secretory phenotype. | Felisbino, Marina B; Rubino, Marcello; Travers, Joshua G; Schuetze, Katherine B; Lemieux, Madeleine E; Anseth, Kristi S; Aguado, Brian A; McKinsey, Timothy A | American journal of physiology. Heart and circulatory physiology | 37889253 | 2024 Jan 01 |
| The eRF1 degrader SRI-41315 acts as a molecular glue at the ribosomal decoding center. | Coelho, João P L; Yip, Matthew C J; Oltion, Keely; Taunton, Jack; Shao, Sichen | Nature chemical biology | 38172604 | 2024 Jul |
| Reward contingency gates selective cholinergic suppression of amygdala neurons. | Kimchi, Eyal Y; Burgos-Robles, Anthony; Matthews, Gillian A; Chakoma, Tatenda; Patarino, Makenzie; Weddington, Javier C; Siciliano, Cody; Yang, Wannan; Foutch, Shaun; Simons, Renee; Fong, Ming-Fai; Jing, Miao; Li, Yulong; Polley, Daniel B; Tye, Kay M | eLife | 38376907 | 2024 Feb 20 |
| The Afferent Function of Adipose Innervation. | Wang, Yu; Ye, Li | Diabetes | 38377447 | 2024 Mar 01 |
| Visualizing PIEZO1 Localization and Activity in hiPSC-Derived Single Cells and Organoids with HaloTag Technology. | Bertaccini, Gabriella A; Casanellas, Ignasi; Evans, Elizabeth L; Nourse, Jamison L; Dickinson, George D; Liu, Gaoxiang; Seal, Sayan; Ly, Alan T; Holt, Jesse R; Wijerathne, Tharaka D; Yan, Shijun; Hui, Elliot E; Lacroix, Jerome J; Panicker, Mitradas M; Upadhyayula, Srigokul; Parker, Ian; Pathak, Medha M | bioRxiv : the preprint server for biology | 38187535 | 2024 Sep 18 |
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| Dissecting tumor transcriptional heterogeneity from single-cell RNA-seq data by generalized binary covariance decomposition. | Liu, Yusha; Carbonetto, Peter; Willwerscheid, Jason; Oakes, Scott A; Macleod, Kay F; Stephens, Matthew | bioRxiv : the preprint server for biology | 37645713 | 2024 May 26 |
| Prediction of on-target and off-target activity of CRISPR-Cas13d guide RNAs using deep learning. | Wessels, Hans-Hermann; Stirn, Andrew; Méndez-Mancilla, Alejandro; Kim, Eric J; Hart, Sydney K; Knowles, David A; Sanjana, Neville E | Nature biotechnology | 37400521 | 2024 Apr |
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| Biphasic regulation of epigenetic state by matrix stiffness during cell reprogramming. | Song, Yang; Soto, Jennifer; Wong, Sze Yue; Wu, Yifan; Hoffman, Tyler; Akhtar, Navied; Norris, Sam; Chu, Julia; Park, Hyungju; Kelkhoff, Douglas O; Ang, Cheen Euong; Wernig, Marius; Kasko, Andrea; Downing, Timothy L; Poo, Mu-Ming; Li, Song | Science advances | 38354231 | 2024 Feb 16 |
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| Nutritional regulation of microbiota-derived metabolites: Implications for immunity and inflammation. | Arifuzzaman, Mohammad; Collins, Nicholas; Guo, Chun-Jun; Artis, David | Immunity | 38198849 | 2024 Jan 09 |
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| Outer membrane vesicles and the outer membrane protein OmpU govern Vibrio cholerae biofilm matrix assembly. | Potapova, Anna; Garvey, William; Dahl, Peter; Guo, Shuaiqi; Chang, Yunjie; Schwechheimer, Carmen; Trebino, Michael A; Floyd, Kyle A; Phinney, Brett S; Liu, Jun; Malvankar, Nikhil S; Yildiz, Fitnat H | mBio | 38206049 | 2024 Feb 14 |
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| The Hybrid Antibiotic Thiomarinol A Overcomes Intrinsic Resistance in Escherichia coli Using a Privileged Dithiolopyrrolone Moiety. | Johnson, Rachel M; Li, Kelin; Chen, Xiaoyan; Morgan, Gina L; Aubé, Jeffrey; Li, Bo | ACS infectious diseases | 38226592 | 2024 Feb 09 |
| Engineered probiotic overcomes pathogen defences using signal interference and antibiotic production to treat infection in mice. | Do, Hackwon; Li, Zhong-Rui; Tripathi, Praveen Kumar; Mitra, Sonali; Guerra, Stephanie; Dash, Ananya; Weerasekera, Dulanthi; Makthal, Nishanth; Shams, Syed; Aggarwal, Shifu; Singh, Bharat Bhushan; Gu, Di; Du, Yongle; Olsen, Randall J; LaRock, Christopher; Zhang, Wenjun; Kumaraswami, Muthiah | Nature microbiology | 38228859 | 2024 Feb |
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| An electroencephalogram microdisplay to visualize neuronal activity on the brain surface. | Tchoe, Youngbin; Wu, Tianhai; U, Hoi Sang; Roth, David M; Kim, Dongwoo; Lee, Jihwan; Cleary, Daniel R; Pizarro, Patricia; Tonsfeldt, Karen J; Lee, Keundong; Chen, Po Chun; Bourhis, Andrew M; Galton, Ian; Coughlin, Brian; Yang, Jimmy C; Paulk, Angelique C; Halgren, Eric; Cash, Sydney S; Dayeh, Shadi A | Science translational medicine | 38657026 | 2024 Apr 24 |
| Sequence basis of transcription initiation in the human genome. | Dudnyk, Kseniia; Cai, Donghong; Shi, Chenlai; Xu, Jian; Zhou, Jian | Science (New York, N.Y.) | 38662817 | 2024 Apr 26 |
| Mitochondrially-associated actin waves maintain organelle homeostasis and equitable inheritance. | Coscia, Stephen M; Moore, Andrew S; Wong, Yvette C; Holzbaur, Erika L F | Current opinion in cell biology | 38692079 | 2024 Jun |
| Impact of the private sector on spatial accessibility to chest radiography services in Lima, Peru. | Xiong, Yiqi; Millones, Ana Karina; Farroñay, Sheyla; Torres, Isabel; Acosta, Diana; Jordan, Demetrice R; Jimenez, Judith; Wippel, Christoph; Jenkins, Helen E; Lecca, Leonid; Yuen, Courtney M | IJTLD open | 38698907 | 2024 Mar 01 |
| Exploiting Sound for Emerging Applications of Extracellular Vesicles. | Wu, Zhuhao; Cai, Hongwei; Tian, Chunhui; Ao, Zheng; Jiang, Lei; Guo, Feng | Nano research | 38712329 | 2024 Feb |
| B cells in the pneumococcus-infected lung are heterogeneous and require CD4+ T cell help including CD40L to become resident memory B cells. | Etesami, Neelou S; Barker, Kimberly A; Shenoy, Anukul T; De Ana, Carolina Lyon; Arafa, Emad I; Grifno, Gabrielle N; Matschulat, Adeline M; Vannini, Michael E; Pihl, Riley M F; Breen, Michael P; Soucy, Alicia M; Goltry, Wesley N; Ha, Catherine T; Betsuyaku, Hanae; Browning, Jeffrey L; Varelas, Xaralabos; Traber, Katrina E; Jones, Matthew R; Quinton, Lee J; Maglione, Paul J; Nia, Hadi T; Belkina, Anna C; Mizgerd, Joseph P | Frontiers in immunology | 38715601 | 2024 |
| CRISPR-Cas Genome Editing in Ex Vivo Human Lungs to Rewire the Translational Path of Genome-Targeting Therapeutics. | Mesaki, Kumi; Yamamoto, Haruchika; Juvet, Stephen; Yeung, Jonathan; Guan, Zehong; Akhter, Akhi; Yao, Yan; Dickie, Cameron; Mangat, Henna; Wang, Aizhou; Wilson, Gavin W; Mariscal, Andrea; Hu, Jim; Davidson, Alan R; Kleinstiver, Benjamin P; Cypel, Marcelo; Liu, Mingyao; Keshavjee, Shaf | Human gene therapy | 38717950 | 2024 Jun |
| Soft mechanical sensors for wearable and implantable applications. | Papani, Rithvik; Li, Yang; Wang, Sihong | Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology | 38723798 | 2024 |
| RNA-based programmable DNA cleavage. | King, Madeleine B; Lapinaite, Audrone | Nature chemical biology | 38730193 | 2024 Jun |
| The microtubule targeting agent ST-401 triggers cell death in interphase and prevents the formation of polyploid giant cancer cells. | Vicente, Juan Jesus; Khan, Kainat; Tillinghast, Grant; McFaline-Figueroa, José L; Sancak, Yasemin; Stella, Nephi | Journal of translational medicine | 38730481 | 2024 May 10 |
| Functional characterization of helminth-associated Clostridiales reveals covariates of Treg differentiation. | Sargsian, Shushan; Mondragón-Palomino, Octavio; Lejeune, Alannah; Ercelen, Defne; Jin, Wen-Bing; Varghese, Alan; Lim, Yvonne A L; Guo, Chun-Jun; Loke, P'ng; Cadwell, Ken | Microbiome | 38730492 | 2024 May 10 |
| Exploring the Role of the Private Sector in Tuberculosis Detection and Management in Lima, Peru: A Mixed-Methods Patient Pathway Analysis. | Wippel, Christoph; Farroñay, Sheyla; Gilbert, Hannah N; Millones, Ana Karina; Acosta, Diana; Torres, Isabel; Jimenez, Judith; Alarcón, Valentina A; Lecca, Leonid; Yuen, Courtney M | The American journal of tropical medicine and hygiene | 38744270 | 2024 Jul 03 |
| Tuft cell-derived acetylcholine promotes epithelial chloride secretion and intestinal helminth clearance. | Billipp, Tyler E; Fung, Connie; Webeck, Lily M; Sargent, Derek B; Gologorsky, Matthew B; Chen, Zuojia; McDaniel, Margaret M; Kasal, Darshan N; McGinty, John W; Barrow, Kaitlyn A; Rich, Lucille M; Barilli, Alessio; Sabat, Mark; Debley, Jason S; Wu, Chuan; Myers, Richard; Howitt, Michael R; von Moltke, Jakob | Immunity | 38744291 | 2024 Jun 11 |
| A high-throughput screening platform for discovering bacterial species and small molecules that modify animal physiology. | Nauta, Kelsie M; Gates, Darrick; Mechan-Llontop, Marco; Wang, Xiao; Nguyen, Kim; Isaguirre, Christine N; Genjdar, Megan; Sheldon, Ryan D; Burton, Nicholas O | bioRxiv : the preprint server for biology | 38746390 | 2024 Apr 29 |
| TOMOMAN: a software package for large scale cryo-electron tomography data preprocessing, community data sharing, and collaborative computing. | Khavnekar, Sagar; Erdmann, Philipp S; Wan, William | bioRxiv : the preprint server for biology | 38746401 | 2024 Aug 07 |
| A Translaminar Spacetime Code Supports Touch-Evoked Traveling Waves. | Gonzales, Daniel L; Khan, Hammad F; Keri, Hayagreev V S; Yadav, Saumitra; Steward, Christopher; Muller, Lyle E; Pluta, Scott R; Jayant, Krishna | bioRxiv : the preprint server for biology | 38766232 | 2024 May 09 |
| Barcoding Notch signaling in the developing brain. | Siniscalco, Abigail; Perera, Roshan Priyarangana; Greenslade, Jessie E; Masters, Aiden; Doll, Hannah; Raj, Bushra | bioRxiv : the preprint server for biology | 38766256 | 2024 May 10 |
| Metabolic coordination between skin epithelium and type 17 immunity sustains chronic skin inflammation. | Subudhi, Ipsita; Konieczny, Piotr; Prystupa, Aleksandr; Castillo, Rochelle L; Sze-Tu, Erica; Xing, Yue; Rosenblum, Daniel; Reznikov, Ilana; Sidhu, Ikjot; Loomis, Cynthia; Lu, Catherine P; Anandasabapathy, Niroshana; Suárez-Fariñas, Mayte; Gudjonsson, Johann E; Tsirigos, Aristotelis; Scher, Jose U; Naik, Shruti | Immunity | 38772365 | 2024 Jul 09 |
| Proxiome assembly of the plant nuclear pore reveals an essential hub for gene expression regulation. | Tang, Yu; Yang, Xiangyun; Huang, Aobo; Seong, Kyungyong; Ye, Mao; Li, Mengting; Zhao, Qiao; Krasileva, Ksenia; Gu, Yangnan | Nature plants | 38773271 | 2024 Jun |
| The performance of 11 fingertip pulse oximeters during hypoxemia in healthy human participants with varied, quantified skin pigment. | Leeb, Gregory; Auchus, Isabella; Law, Tyler; Bickler, Philip; Feiner, John; Hashi, Shamsudini; Monk, Ellis; Igaga, Elizabeth; Bernstein, Michael; Chou, Yu Celine; Hughes, Caroline; Schornack, Deleree; Lester, Jenna; Moore Jr, Kelvin; Okunlola, Olubunmi; Fernandez, Jana; Shmuylovich, Leonid; Lipnick, Michael | EBioMedicine | 38458110 | 2024 Apr |
| Dynamic microenvironments shape nuclear organization and gene expression. | Hayward-Lara, Gabriela; Fischer, Matthew D; Mir, Mustafa | Current opinion in genetics & development | 38461773 | 2024 Jun |
| Starvation-resistant cavefish reveal conserved mechanisms of starvation-induced hepatic lipotoxicity. | Pozo-Morales, Macarena; Cobham, Ansa E; Centola, Cielo; McKinney, Mary Cathleen; Liu, Peiduo; Perazzolo, Camille; Lefort, Anne; Libert, Frédérick; Bai, Hua; Rohner, Nicolas; Singh, Sumeet Pal | Life science alliance | 38467419 | 2024 May |
| Lipoarabinomannan mediates localized cell wall integrity during division in mycobacteria. | Sparks, Ian L; Kado, Takehiro; Prithviraj, Malavika; Nijjer, Japinder; Yan, Jing; Morita, Yasu S | Nature communications | 38467648 | 2024 Mar 11 |
| Reprograming Clots for In Vivo Chemical Targeting in Traumatic Brain Injury. | Kandell, Rebecca M; Wu, Jason R; Kwon, Ester J | Advanced materials (Deerfield Beach, Fla.) | 38780012 | 2024 Aug |
| The 18S rRNA Methyltransferase DIMT-1 Regulates Lifespan in the Germline Later in Life. | Hafiz Rothi, M; Sarkar, Gautam Chandra; Haddad, Joseph Al; Mitchell, Wayne; Ying, Kejun; Pohl, Nancy; Sotomayor-Mena, Roberto G; Natale, Julia; Dellacono, Scarlett; Gladyshev, Vadim N; Lieberman Greer, Eric | bioRxiv : the preprint server for biology | 38798397 | 2024 May 15 |
| Engineered reactivity of a bacterial E1-like enzyme enables ATP-driven modification of protein C termini. | Frazier, Clara L; Deb, Debashrito; Weeks, Amy M | bioRxiv : the preprint server for biology | 38798401 | 2024 May 13 |
| Multi-organ structural homogeneity of amyloid fibrils in ATTRv-T60A amyloidosis patients, revealed by Cryo-EM. | Fernandez-Ramirez, Maria Del Carmen; Nguyen, Binh A; Singh, Virender; Afrin, Shumaila; Evers, Bret; Basset, Parker; Wang, Lanie; Pękała, Maja; Ahmed, Yasmin; Singh, Preeti; Canepa, Jacob; Wosztyl, Aleksandra; Li, Yang; Saelices, Lorena | bioRxiv : the preprint server for biology | 38798519 | 2024 May 14 |
| A single-vector intersectional AAV strategy for interrogating cellular diversity and brain function. | Hughes, Alex C; Pittman, Brittany G; Xu, Beisi; Gammons, Jesse W; Webb, Charis M; Nolen, Hunter G; Chapman, Phillip; Bikoff, Jay B; Schwarz, Lindsay A | Nature neuroscience | 38802592 | 2024 Jul |
| Evolution of diapause in the African turquoise killifish by remodeling the ancient gene regulatory landscape. | Singh, Param Priya; Reeves, G Adam; Contrepois, Kévin; Papsdorf, Katharina; Miklas, Jason W; Ellenberger, Mathew; Hu, Chi-Kuo; Snyder, Michael P; Brunet, Anne | Cell | 38810644 | 2024 Jun 20 |
| Tissue-specific landscape of protein aggregation and quality control in an aging vertebrate. | Chen, Yiwen R; Harel, Itamar; Singh, Param Priya; Ziv, Inbal; Moses, Eitan; Goshtchevsky, Uri; Machado, Ben E; Brunet, Anne; Jarosz, Daniel F | Developmental cell | 38810654 | 2024 Jul 22 |
| Niclosamide potentiates TMEM16A and induces vasoconstriction. | Liang, Pengfei; Wan, Yui Chun S; Yu, Kuai; Hartzell, H Criss; Yang, Huanghe | The Journal of general physiology | 38814250 | 2024 Jul 01 |
| Mis-splicing of Mitotic Regulators Sensitizes SF3B1-Mutated Human HSCs to CHK1 Inhibition. | Sarchi, Martina; Clough, Courtnee A; Crosse, Edie I; Kim, Jason; Baquero Galvis, Laura D; Aydinyan, Nelli; Wellington, Rachel; Yang, Feini; Gallì, Anna; Creamer, J Philip; Stewart, Sintra; Bradley, Robert K; Malcovati, Luca; Doulatov, Sergei | Blood cancer discovery | 38856693 | 2024 Sep 03 |
| Rapid, antibiotic incubation-free determination of tuberculosis drug resistance using machine learning and Raman spectroscopy. | Ogunlade, Babatunde; Tadesse, Loza F; Li, Hongquan; Vu, Nhat; Banaei, Niaz; Barczak, Amy K; Saleh, Amr A E; Prakash, Manu; Dionne, Jennifer A | Proceedings of the National Academy of Sciences of the United States of America | 38861604 | 2024 Jun 18 |
| Gel-assisted mass spectrometry imaging enables sub-micrometer spatial lipidomics. | Chan, Yat Ho; Pathmasiri, Koralege C; Pierre-Jacques, Dominick; Hibbard, Maddison C; Tao, Nannan; Fischer, Joshua L; Yang, Ethan; Cologna, Stephanie M; Gao, Ruixuan | Nature communications | 38866734 | 2024 Jun 12 |
| Medial entorhinal cortex mediates learning of context-dependent interval timing behavior. | Bigus, Erin R; Lee, Hyun-Woo; Bowler, John C; Shi, Jiani; Heys, James G | Nature neuroscience | 38877306 | 2024 Aug |
| Phage detection by a bacterial NLR-related protein is mediated by DnaJ. | Conte, Amy N; Ridgeway, Samantha M; Ruchel, Madison E; Kibby, Emily M; Nagy, Toni A; Whiteley, Aaron T | bioRxiv : the preprint server for biology | 38895412 | 2024 Jun 04 |
| Spatial Single-cell Analysis Decodes Cortical Layer and Area Specification. | Qian, Xuyu; Coleman, Kyle; Jiang, Shunzhou; Kriz, Andrea J; Marciano, Jack H; Luo, Chunyu; Cai, Chunhui; Manam, Monica Devi; Caglayan, Emre; Otani, Aoi; Ghosh, Urmi; Shao, Diane D; Andersen, Rebecca E; Neil, Jennifer E; Johnson, Robert; LeFevre, Alexandra; Hecht, Jonathan L; Miller, Michael B; Sun, Liang; Stringer, Carsen; Li, Mingyao; Walsh, Christopher A | bioRxiv : the preprint server for biology | 38915567 | 2024 Jun 10 |
| A nucleosome switch primes Hepatitis B Virus infection. | Prescott, Nicholas A; Mansisidor, Andrés; Bram, Yaron; Biaco, Tracy; Rendleman, Justin; Faulkner, Sarah C; Lemmon, Abigail A; Lim, Christine; Hamard, Pierre-Jacques; Koche, Richard P; Risca, Viviana I; Schwartz, Robert E; David, Yael | bioRxiv : the preprint server for biology | 38915612 | 2024 Jun 12 |
| Discovering type I cis-AT polyketides through computational mass spectrometry and genome mining with Seq2PKS. | Yan, Donghui; Zhou, Muqing; Adduri, Abhinav; Zhuang, Yihao; Guler, Mustafa; Liu, Sitong; Shin, Hyonyoung; Kovach, Torin; Oh, Gloria; Liu, Xiao; Deng, Yuting; Wang, Xiaofeng; Cao, Liu; Sherman, David H; Schultz, Pamela J; Kersten, Roland D; Clement, Jason A; Tripathi, Ashootosh; Behsaz, Bahar; Mohimani, Hosein | Nature communications | 38918378 | 2024 Jun 25 |
| Structure of the human systemic RNAi defective transmembrane protein 1 (hSIDT1) reveals the conformational flexibility of its lipid binding domain. | Navratna, Vikas; Kumar, Arvind; Rana, Jaimin K; Mosalaganti, Shyamal | Life science alliance | 38925866 | 2024 Sep |
| Enamine N-oxides: Design, Synthesis, and Function in Bioorthogonal Reactions. | Kang, Dahye; Kim, Justin | Synlett : accounts and rapid communications in synthetic organic chemistry | 38947226 | 2024 Jan |
| Type-I-interferon-responsive microglia shape cortical development and behavior. | Escoubas, Caroline C; Dorman, Leah C; Nguyen, Phi T; Lagares-Linares, Christian; Nakajo, Haruna; Anderson, Sarah R; Barron, Jerika J; Wade, Sarah D; Cuevas, Beatriz; Vainchtein, Ilia D; Silva, Nicholas J; Guajardo, Ricardo; Xiao, Yinghong; Lidsky, Peter V; Wang, Ellen Y; Rivera, Brianna M; Taloma, Sunrae E; Kim, Dong Kyu; Kaminskaya, Elizaveta; Nakao-Inoue, Hiromi; Schwer, Bjoern; Arnold, Thomas D; Molofsky, Ari B; Condello, Carlo; Andino, Raul; Nowakowski, Tomasz J; Molofsky, Anna V | Cell | 38490196 | 2024 Apr 11 |
| Cryo-EM confirms a common fibril fold in the heart of four patients with ATTRwt amyloidosis. | Nguyen, Binh An; Singh, Virender; Afrin, Shumaila; Singh, Preeti; Pekala, Maja; Ahmed, Yasmin; Pedretti, Rose; Canepa, Jacob; Lemoff, Andrew; Kluve-Beckerman, Barbara; Wydorski, Pawel; Chhapra, Farzeen; Saelices, Lorena | bioRxiv : the preprint server for biology | 38496656 | 2024 Mar 09 |
| Villus myofibroblasts are developmental and adult progenitors of mammalian gut lymphatic musculature. | Sanketi, Bhargav D; Mantri, Madhav; Huang, Liqing; Tavallaei, Mohammad A; Hu, Shing; Wang, Michael F Z; De Vlaminck, Iwijn; Kurpios, Natasza A | Developmental cell | 38537630 | 2024 May 06 |
| Protein-altering variants at copy number-variable regions influence diverse human phenotypes. | Hujoel, Margaux L A; Handsaker, Robert E; Sherman, Maxwell A; Kamitaki, Nolan; Barton, Alison R; Mukamel, Ronen E; Terao, Chikashi; McCarroll, Steven A; Loh, Po-Ru | Nature genetics | 38548989 | 2024 Apr |
| Colitis reduces active social engagement in mice and is ameliorated by supplementation with human microbiota members. | Brown, D Garrett; Murphy, Michaela; Cadeddu, Roberto; Bell, Rickesha; Weis, Allison; Chiaro, Tyson; Klag, Kendra; Morgan, Jubel; Coon, Hilary; Stephens, W Zac; Bortolato, Marco; Round, June L | Nature communications | 38553486 | 2024 Mar 30 |
| Distinct changes to hippocampal and medial entorhinal circuits emerge across the progression of cognitive deficits in epilepsy. | Feng, Yu; Diego, Keziah S; Dong, Zhe; Wick, Zoé Christenson; Page-Harley, Lucia; Page-Harley, Veronica; Schnipper, Julia; Lamsifer, Sophia I; Pennington, Zachary T; Vetere, Lauren M; Philipsberg, Paul A; Soler, Ivan; Jurkowski, Albert; Rosado, Christin J; Khan, Nadia N; Cai, Denise J; Shuman, Tristan | bioRxiv : the preprint server for biology | 38559224 | 2024 Mar 14 |
| LiFT (a Lithium Fiber-Based Test): An At-Home Companion Diagnostics for a Safer Lithium Therapy in Bipolar Disorder. | Amirghasemi, Farbod; Nejad, Sina Khazaee; Chen, Ruitong; Soleimani, Ali; Ong, Victor; Shroff, Nika; Eftekhari, Tanya; Ushijima, Kara; Ainla, Alar; Siegel, Steven; Mousavi, Maral P S | Advanced healthcare materials | 38563494 | 2024 Jul |
| A germline point mutation in the MYC-FBW7 phosphodegron initiates hematopoietic malignancies. | Freie, Brian; Carroll, Patrick A; Varnum-Finney, Barbara J; Ramsey, Erin L; Ramani, Vijay; Bernstein, Irwin; Eisenman, Robert N | Genes & development | 38565249 | 2024 Apr 17 |
| Protocol to detect and quantify tumor hypoxia in mice using photoacoustic imaging. | Dai, Tao; Rich, Laurie J; Seshadri, Mukund; Dasgupta, Subhamoy | STAR protocols | 38568814 | 2024 Jun 21 |
| The microbiota and T cells non-genetically modulate inherited phenotypes transgenerationally. | Harris, Jordan C; Trigg, Natalie A; Goshu, Bruktawit; Yokoyama, Yuichi; Dohnalová, Lenka; White, Ellen K; Harman, Adele; Murga-Garrido, Sofía M; Ting-Chun Pan, Jamie; Bhanap, Preeti; Thaiss, Christoph A; Grice, Elizabeth A; Conine, Colin C; Kambayashi, Taku | Cell reports | 38573852 | 2024 Apr 23 |
| An Update on MR Spectroscopy in Cancer Management: Advances in Instrumentation, Acquisition, and Analysis. | Martinez Luque, Eva; Liu, Zexuan; Sung, Dongsuk; Goldberg, Rachel M; Agarwal, Rishab; Bhattacharya, Aditya; Ahmed, Nadine S; Allen, Jason W; Fleischer, Candace C | Radiology. Imaging cancer | 38578207 | 2024 May |
| Multiparametric Single-Vesicle Flow Cytometry Resolves Extracellular Vesicle Heterogeneity and Reveals Selective Regulation of Biogenesis and Cargo Distribution. | von Lersner, Ariana K; Fernandes, Fabiane; Ozawa, Patricia Midori Murobushi; Jackson, Marques; Masureel, Matthieu; Ho, Hoangdung; Lima, Sierra M; Vagner, Tatyana; Sung, Bong Hwan; Wehbe, Mohamed; Franze, Kai; Pua, Heather; Wilson, John T; Irish, Jonathan M; Weaver, Alissa M; Di Vizio, Dolores; Zijlstra, Andries | ACS nano | 38578701 | 2024 Apr 16 |
| PIEZO1 regulates leader cell formation and cellular coordination during collective keratinocyte migration. | Chen, Jinghao; Holt, Jesse R; Evans, Elizabeth L; Lowengrub, John S; Pathak, Medha M | PLoS computational biology | 38578817 | 2024 Apr |
| BRAND: a platform for closed-loop experiments with deep network models. | Ali, Yahia H; Bodkin, Kevin; Rigotti-Thompson, Mattia; Patel, Kushant; Card, Nicholas S; Bhaduri, Bareesh; Nason-Tomaszewski, Samuel R; Mifsud, Domenick M; Hou, Xianda; Nicolas, Claire; Allcroft, Shane; Hochberg, Leigh R; Au Yong, Nicholas; Stavisky, Sergey D; Miller, Lee E; Brandman, David M; Pandarinath, Chethan | Journal of neural engineering | 38579696 | 2024 Apr 17 |
| Symmetry in levels of axon-axon homophilic adhesion establishes topography in the corpus callosum and development of connectivity between brain hemispheres. | Poulopoulos, Alexandros; Davis, Patrick; Brandenburg, Cheryl; Itoh, Yasuhiro; Galazo, Maria J; Greig, Luciano C; Romanowski, Andrea J; Budnik, Bogdan; Macklis, Jeffrey D | bioRxiv : the preprint server for biology | 38585721 | 2024 Mar 31 |
| A torpor-like state (TLS) in mice slows blood epigenetic aging and prolongs healthspan. | Jayne, Lorna; Lavin-Peter, Aurora; Roessler, Julian; Tyshkovskiy, Alexander; Antoszewski, Mateusz; Ren, Erika; Markovski, Aleksandar; Sun, Senmiao; Yao, Hanqi; Sankaran, Vijay G; Gladyshev, Vadim N; Brooke, Robert T; Horvath, Steve; Griffith, Eric C; Hrvatin, Sinisa | bioRxiv : the preprint server for biology | 38585858 | 2024 Mar 25 |
| Wrapping of single-stranded DNA by Replication Protein A and modulation through phosphorylation. | Chadda, Rahul; Kaushik, Vikas; Ahmad, Iram Munir; Deveryshetty, Jaigeeth; Holehouse, Alex; Sigurdsson, Snorri Th D; Bothner, Brian; Dastvan, Reza; Origanti, Sofia; Antony, Edwin | bioRxiv : the preprint server for biology | 38585962 | 2024 Mar 29 |
| Cell-Type Specificity of Mosaic Chromosome 1q Gain Resolved by snRNA-seq in a Case of Epilepsy With Hyaline Protoplasmic Astrocytopathy. | Leng, Kun; Cadwell, Cathryn R; Devine, Walter P; Tihan, Tarik; Qi, Zhongxia; Singhal, Nilika S; Glenn, Orit A; Kamiya, Sherry; Wiita, Arun P; Berger, Amy C; Shieh, Joseph T; Titus, Erron W; Paredes, Mercedes F; Upadhyay, Vaibhav | Neurology. Genetics | 38586598 | 2024 Apr |
| Functionalizing tandem mass tags for streamlining click-based quantitative chemoproteomics. | Burton, Nikolas R; Backus, Keriann M | Communications chemistry | 38600184 | 2024 Apr 10 |
| Mechanism of ASF1 Inhibition by CDAN1. | Sedor, Samantha F; Shao, Sichen | bioRxiv : the preprint server for biology | 39149339 | 2024 Aug 08 |
| Engineering the plant intracellular immune receptor Sr50 to restore recognition of the AvrSr50 escape mutant. | Seong, Kyungyong; Wei, Wei; Vega, Brandon; Dee, Amanda; Ramirez-Bernardino, Griselda; Kumar, Rakesh; Parra, Lorena; Krasileva, Ksenia | bioRxiv : the preprint server for biology | 39149390 | 2024 Aug 09 |
| Discovery and Quantification of Long-Range RNA Base Pairs in Coronavirus Genomes with SEARCH-MaP and SEISMIC-RNA. | Allan, Matthew F; Aruda, Justin; Plung, Jesse S; Grote, Scott L; des Taillades, Yves J Martin; de Lajarte, Albéric A; Bathe, Mark; Rouskin, Silvi | Research square | 39149495 | 2024 Aug 07 |
| "As a patient I do not belong to the clinic, I belong to the community": co-developing multi-level, person-centred tuberculosis stigma interventions in Cape Town, South Africa. | Hayward, Sally E; Vanqa, Nosivuyile; Makanda, Goodman; Tisile, Phumeza; Ngwatyu, Luthando; Foster, Isabel; Mcinziba, Abenathi A; Biewer, Amanda; Mbuyamba, Rachel; Galloway, Michelle; Bunyula, Siyavuya; van der Westhuizen, Helene-Mari; Friedland, Jon S; Medina-Marino, Andrew; Viljoen, Lario; Schoeman, Ingrid; Hoddinott, Graeme; Nathavitharana, Ruvandhi R | BMC global and public health | 39157720 | 2024 |
| Sugar assimilation underlying dietary evolution of Neotropical bats. | Camacho, Jasmin; Bernal-Rivera, Andrea; Peña, Valentina; Morales-Sosa, Pedro; Robb, Sofia M C; Russell, Jonathon; Yi, Kexi; Wang, Yongfu; Tsuchiya, Dai; Murillo-García, Oscar E; Rohner, Nicolas | Nature ecology & evolution | 39198571 | 2024 Sep |
| Spatially clustered type I interferon responses at injury borderzones. | Ninh, V K; Calcagno, D M; Yu, J D; Zhang, B; Taghdiri, N; Sehgal, R; Mesfin, J M; Chen, C J; Kalhor, K; Toomu, A; Duran, J M; Adler, E; Hu, J; Zhang, K; Christman, K L; Fu, Z; Bintu, B; King, K R | Nature | 39198639 | 2024 Sep |
| Fenestrated Endothelial Cells across Organs: Insights into Kidney Function and Disease. | Mou, Xingrui; Leeman, Sophia M; Roye, Yasmin; Miller, Carmen; Musah, Samira | International journal of molecular sciences | 39201792 | 2024 Aug 22 |
| A sperm-enriched 5'fragment of tRNA-Valine regulates preimplantation embryonic transcriptome and development. | Liu, Simeiyun; Holmes, Andrew D; Katzman, Sol; Sharma, Upasna | bioRxiv : the preprint server for biology | 39211093 | 2024 Aug 27 |
| Lipid- and protein-directed photosensitizer proximity labeling captures the cholesterol interactome. | Becker, Andrew P; Biletch, Elijah; Kennelly, John Paul; Julio, Ashley R; Villaneuva, Miranda; Nagari, Rohith T; Turner, Daniel W; Burton, Nikolas R; Fukuta, Tomoyuki; Cui, Liujuan; Xiao, Xu; Hong, Soon-Gook; Mack, Julia J; Tontonoz, Peter; Backus, Keriann M | bioRxiv : the preprint server for biology | 39229057 | 2024 Aug 24 |
| Epigenetic regulation of global proteostasis dynamics by RBBP5 ensures mammalian organismal health. | Kubra, Syeda; Sun, Michelle; Dion, William; Catak, Ahmet; Luong, Hannah; Wang, Haokun; Pan, Yinghong; Liu, Jia-Jun; Ponna, Aishwarya; Sipula, Ian; Jurczak, Michael J; Liu, Silvia; Zhu, Bokai | bioRxiv : the preprint server for biology | 39314427 | 2024 Sep 13 |
| Increased anti-correlation between the left dorsolateral prefrontal cortex and the default mode network following Stanford Neuromodulation Therapy (SNT): analysis of a double-blinded, randomized, sham-controlled trial. | Gajawelli, Niharika; Geoly, Andrew D; Batail, Jean-Marie; Xiao, Xiaoqian; Maron-Katz, Adi; Cole, Eleanor; Azeez, Azeezat; Kratter, Ian H; Saggar, Manish; Williams, Nolan R | Npj mental health research | 38971869 | 2024 Jul 06 |
| Inter-cellular mRNA Transfer Alters Human Pluripotent Stem Cell State. | Yoneyama, Yosuke; Zhang, Ran-Ran; Kimura, Masaki; Cai, Yuqi; Adam, Mike; Parameswaran, Sreeja; Masaki, Hideki; Mizuno, Naoaki; Bhadury, Joydeep; Maezawa, So; Ochiai, Hiroshi; Nakauchi, Hiromitsu; Potter, S Steven; Weirauch, Matthew T; Takebe, Takanori | bioRxiv : the preprint server for biology | 38979277 | 2024 Jun 27 |
| A Wireless, Multicolor Fluorescence Image Sensor Implant for Real-Time Monitoring in Cancer Therapy. | Roschelle, Micah; Rabbani, Rozhan; Gweon, Surin; Kumar, Rohan; Vercruysse, Alec; Cho, Nam Woo; Spitzer, Matthew H; Niknejad, Ali M; Stojanović, Vladimir M; Anwar, Mekhail | ArXiv | 38979489 | 2024 Jun 27 |
| Rational protein engineering to enhance MHC-independent T cell receptors. | Chang, Ju-Fang; Landmann, Jack H; Chang, Tien-Ching; Selli, Mehmet Emrah; Tenzin, Yangdon; Warrington, John M; Ritchey, Julie; Hsu, Yu-Sung; Slade, Michael; Gupta, Deepesh Kumar; DiPersio, John F; Holehouse, Alex S; Singh, Nathan | Cancer discovery | 38980802 | 2024 Jul 10 |
| Fast and facile synthesis of amidine-incorporated degradable lipids for versatile mRNA delivery in vivo. | Han, Xuexiang; Alameh, Mohamad-Gabriel; Gong, Ningqiang; Xue, Lulu; Ghattas, Majed; Bojja, Goutham; Xu, Junchao; Zhao, Gan; Warzecha, Claude C; Padilla, Marshall S; El-Mayta, Rakan; Dwivedi, Garima; Xu, Ying; Vaughan, Andrew E; Wilson, James M; Weissman, Drew; Mitchell, Michael J | Nature chemistry | 38982196 | 2024 Jul 09 |
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| Geography versus sociodemographics as predictors of changes in daily mobility across the USA during the COVID-19 pandemic: a two-stage regression analysis across 26 metropolitan areas. | Schaber, Kathryn; Arambepola, Rohan; Schluth, Catherine; Labrique, Alain B; Mehta, Shruti H; Solomon, Sunil S; Cummings, Derek A T; Wesolowski, Amy | BMJ open | 38986558 | 2024 Jul 09 |
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| A pheromone receptor in cichlid fish mediates attraction to females but inhibits male parental care. | Li, Cheng-Yu; Bowers, Jessica M; Alexander, Theresa A; Behrens, Kristen A; Jackson, Peter; Amini, Cyrus J; Juntti, Scott A | Current biology : CB | 39094572 | 2024 Sep 09 |
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| An Accurate and Rapidly Calibrating Speech Neuroprosthesis. | Card, Nicholas S; Wairagkar, Maitreyee; Iacobacci, Carrina; Hou, Xianda; Singer-Clark, Tyler; Willett, Francis R; Kunz, Erin M; Fan, Chaofei; Vahdati Nia, Maryam; Deo, Darrel R; Srinivasan, Aparna; Choi, Eun Young; Glasser, Matthew F; Hochberg, Leigh R; Henderson, Jaimie M; Shahlaie, Kiarash; Stavisky, Sergey D; Brandman, David M | The New England journal of medicine | 39141853 | 2024 Aug 15 |
| Activity of FoxP2-positive neurons is associated with tadpole begging behavior. | Ludington, Sarah C; McKinney, Jordan E; Butler, Julie M; Goolsby, Billie C; Callan, Ashlyn A; Gaines-Richardson, Maiah; O'Connell, Lauren A | bioRxiv : the preprint server for biology | 37292748 | 2024 Aug 29 |
| AAV-mediated delivery of a Sleeping Beauty transposon and an mRNA-encoded transposase for the engineering of therapeutic immune cells. | Ye, Lupeng; Lam, Stanley Z; Yang, Luojia; Suzuki, Kazushi; Zou, Yongji; Lin, Qianqian; Zhang, Yueqi; Clark, Paul; Peng, Lei; Chen, Sidi | Nature biomedical engineering | 37430157 | 2024 Feb |
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| Genetic mapping identifies Homer1 as a developmental modifier of attention. | Gershon, Zachary; Bonito-Oliva, Alessandra; Kanke, Matt; Terceros, Andrea; Rankin, Genelle; Fak, John; Harada, Yujin; Iannone, Andrew F; Gebremedhin, Millennium; Fabella, Brian; De Marco Garcia, Natalia V; Sethupathy, Praveen; Rajasethupathy, Priya | bioRxiv : the preprint server for biology | 36993710 | 2024 Feb 28 |
| Dictionary learning for integrative, multimodal and scalable single-cell analysis. | Hao, Yuhan; Stuart, Tim; Kowalski, Madeline H; Choudhary, Saket; Hoffman, Paul; Hartman, Austin; Srivastava, Avi; Molla, Gesmira; Madad, Shaista; Fernandez-Granda, Carlos; Satija, Rahul | Nature biotechnology | 37231261 | 2024 Feb |
| Simultaneous interneuron labeling reveals population-level interactions among parvalbumin, somatostatin, and pyramidal neurons in cortex. | Potter, Christian; Bassi, Constanza; Runyan, Caroline A | bioRxiv : the preprint server for biology | 36711788 | 2024 Feb 02 |
| Origin and adult renewal of the gut lacteal musculature from villus myofibroblasts. | Sanketi, Bhargav D; Mantri, Madhav; Huang, Liqing; Tavallaei, Mohammad A; Hu, Shing; Wang, Michael F Z; De Vlaminck, Iwijn; Kurpios, Natasza A | bioRxiv : the preprint server for biology | 36712064 | 2024 Jan 09 |
| Infralimbic parvalbumin neural activity facilitates cued threat avoidance. | Ho, Yi-Yun; Yang, Qiuwei; Boddu, Priyanka; Bulkin, David A; Warden, Melissa R | bioRxiv : the preprint server for biology | 37645876 | 2024 Mar 24 |
| Energetic Demands Regulate Sleep-Wake Rhythm Circuit Development. | Poe, Amy R; Zhu, Lucy; Tang, Si Hao; Valencia, Ella; Kayser, Matthew S | bioRxiv : the preprint server for biology | 37786713 | 2024 May 22 |
| Trophoblast organoids with physiological polarity model placental structure and function. | Yang, Liheng; Liang, Pengfei; Yang, Huanghe; Coyne, Carolyn B | Journal of cell science | 37676312 | 2024 Mar 01 |
| The Role of Endothelial Cells in Atherosclerosis: Insights from Genetic Association Studies. | Pepin, Mark E; Gupta, Rajat M | The American journal of pathology | 37827214 | 2024 Apr |
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| Structure of the human heparan-α-glucosaminide N-acetyltransferase (HGSNAT). | Navratna, Vikas; Kumar, Arvind; Rana, Jaimin K; Mosalaganti, Shyamal | bioRxiv : the preprint server for biology | 37961489 | 2024 Jun 12 |
| A nanobody-based strategy for rapid and scalable purification of human protein complexes. | Stevens, Taylor Anthony; Tomaleri, Giovani Pinton; Hazu, Masami; Wei, Sophia; Nguyen, Vy N; DeKalb, Charlene; Voorhees, Rebecca M; Pleiner, Tino | Nature protocols | 37974029 | 2024 Jan |
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| Structural basis of Gabija anti-phage defence and viral immune evasion. | Antine, Sadie P; Johnson, Alex G; Mooney, Sarah E; Leavitt, Azita; Mayer, Megan L; Yirmiya, Erez; Amitai, Gil; Sorek, Rotem; Kranzusch, Philip J | Nature | 37992757 | 2024 Jan |
| Increased task-relevant fMRI responsiveness in comatose cardiac arrest patients is associated with improved neurologic outcomes. | Dhakal, Kiran; Rosenthal, Eric S; Kulpanowski, Annelise M; Dodelson, Jacob A; Wang, Zihao; Cudemus-Deseda, Gaston; Villien, Marjorie; Edlow, Brian L; Presciutti, Alexander M; Januzzi, James L; Ning, MingMing; Taylor Kimberly, W; Amorim, Edilberto; Brandon Westover, M; Copen, William A; Schaefer, Pamela W; Giacino, Joseph T; Greer, David M; Wu, Ona | Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism | 37728641 | 2024 Jan |
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| Optimization of base editors for the functional correction of SMN2 as a treatment for spinal muscular atrophy. | Alves, Christiano R R; Ha, Leillani L; Yaworski, Rebecca; Sutton, Emma R; Lazzarotto, Cicera R; Christie, Kathleen A; Reilly, Aoife; Beauvais, Ariane; Doll, Roman M; de la Cruz, Demitri; Maguire, Casey A; Swoboda, Kathryn J; Tsai, Shengdar Q; Kothary, Rashmi; Kleinstiver, Benjamin P | Nature biomedical engineering | 38057426 | 2024 Feb |
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| Small LEA proteins as an effective air-water interface protectant for fragile samples during cryo-EM grid plunge freezing. | Abe, Kaitlyn M; Lim, Ci Ji | bioRxiv : the preprint server for biology | 38370693 | 2024 Feb 11 |
| TMEM16 and OSCA/TMEM63 proteins share a conserved potential to permeate ions and phospholipids. | Lowry, Augustus J; Liang, Pengfei; Song, Mo; Wan, Y C Serena; Pei, Zhen-Ming; Yang, Huanghe; Zhang, Yang | bioRxiv : the preprint server for biology | 38370744 | 2024 Sep 03 |
| Transient RNA structures underlie highly pathogenic avian influenza virus genesis. | Funk, Mathis; Spronken, Monique I; Bestebroer, Theo M; de Bruin, Anja C M; Gultyaev, Alexander P; Fouchier, Ron A M; Te Velthuis, Aartjan J W; Richard, Mathilde | bioRxiv : the preprint server for biology | 38370829 | 2024 Jan 11 |
| Structure of the human systemic RNAi defective transmembrane protein 1 (hSIDT1) reveals the conformational flexibility of its lipid binding domain. | Navratna, Vikas; Kumar, Arvind; Rana, Jaimin K; Mosalaganti, Shyamal | bioRxiv : the preprint server for biology | 38187772 | 2024 Jun 12 |
| 3D spheroid culturing of Astyanax mexicanus liver-derived cell lines recapitulates distinct transcriptomic and metabolic states of in vivo tissue environment. | Biswas, Tathagata; Rajendran, Naresh; Hassan, Huzaifa; Li, Hua; Zhao, Chongbei; Rohner, Nicolas | Journal of experimental zoology. Part B, Molecular and developmental evolution | 38192038 | 2024 May |
| Transcriptome analysis of polyploid giant cancer cells and their progeny reveals a functional role for p21 in polyploidization and depolyploidization. | White-Gilbertson, Shai; Lu, Ping; Saatci, Ozge; Sahin, Ozgur; Delaney, Joe R; Ogretmen, Besim; Voelkel-Johnson, Christina | The Journal of biological chemistry | 38447798 | 2024 Apr |
| Structural polymorphism of amyloid fibrils in ATTR amyloidosis revealed by cryo-electron microscopy. | Nguyen, Binh An; Singh, Virender; Afrin, Shumaila; Yakubovska, Anna; Wang, Lanie; Ahmed, Yasmin; Pedretti, Rose; Fernandez-Ramirez, Maria Del Carmen; Singh, Preeti; Pękała, Maja; Cabrera Hernandez, Luis O; Kumar, Siddharth; Lemoff, Andrew; Gonzalez-Prieto, Roman; Sawaya, Michael R; Eisenberg, David S; Benson, Merrill Douglas; Saelices, Lorena | Nature communications | 38233397 | 2024 Jan 17 |
| Affinity-optimizing enhancer variants disrupt development. | Lim, Fabian; Solvason, Joe J; Ryan, Genevieve E; Le, Sophia H; Jindal, Granton A; Steffen, Paige; Jandu, Simran K; Farley, Emma K | Nature | 38233525 | 2024 Feb |
| Exposure to parental depression in adolescence and proinflammatory phenotypes 20 years later. | Ehrlich, Katherine B; Celia-Sanchez, Manuela L; Yu, Tianyi; Heard-Garris, Nia; Chen, Edith; Miller, Gregory E; Brody, Gene H | Brain, behavior, and immunity | 38242368 | 2024 Mar |
| A Semi-supervised Pipeline for Accurate Neuron Segmentation with Fewer Ground Truth Labels. | Baker, Casey M; Gong, Yiyang | eNeuro | 38242690 | 2024 Feb |
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| Light-driven C-H activation mediated by 2D transition metal dichalcogenides. | Li, Jingang; Zhang, Di; Guo, Zhongyuan; Jiang, Xi; Larson, Jonathan M; Zhu, Haoyue; Zhang, Tianyi; Gu, Yuqian; Blankenship, Brian; Chen, Min; Wu, Zilong; Huang, Suichu; Kostecki, Robert; Minor, Andrew M; Grigoropoulos, Costas P; Akinwande, Deji; Terrones, Mauricio; Redwing, Joan M; Li, Hao; Zheng, Yuebing | Research square | 38260621 | 2024 Jan 05 |
| Oral mucosal vaccination using integrated fiber microneedles. | Creighton, Rachel L; Faber, Kate A; Tobos, Carmen I; Doan, My-Anh; Guo, Teri; Woodrow, Kim A | Journal of controlled release : official journal of the Controlled Release Society | 38295993 | 2024 Mar |
| Advancements in therapeutic development: kidney organoids and organs on a chip. | Tabibzadeh, Nahid; Morizane, Ryuji | Kidney international | 38296026 | 2024 Apr |
| Low frequency independent components: Internal neuromarkers linking cortical LFPs to behavior. | Orellana V, Diego; Donoghue, John P; Vargas-Irwin, Carlos E | iScience | 38303697 | 2024 Feb 16 |
| Using a theory-based, customized video game as an educational tool to improve physicians' trauma triage decisions: study protocol for a randomized cluster trial. | Mohan, Deepika; Angus, Derek C; Chang, Chung-Chou H; Elmer, Jonathan; Fischhoff, Baruch; Rak, Kim J; Barnes, Jacqueline L; Peitzman, Andrew B; White, Douglas B | Trials | 38365758 | 2024 Feb 16 |
| Perturbative diffraction methods resolve a conformational switch that facilitates a two-step enzymatic mechanism. | Greisman, Jack B; Dalton, Kevin M; Brookner, Dennis E; Klureza, Margaret A; Sheehan, Candice J; Kim, In-Sik; Henning, Robert W; Russi, Silvia; Hekstra, Doeke R | Proceedings of the National Academy of Sciences of the United States of America | 38386706 | 2024 Feb 27 |
| Caenorhabditis elegans endorse bacterial nanocellulose fibers as functional dietary Fiber reducing lipid markers. | Muñoz-Juan, Amanda; Assié, Adrien; Esteve-Codina, Anna; Gut, Marta; Benseny-Cases, Núria; Samuel, Buck S; Dalfó, Esther; Laromaine, Anna | Carbohydrate polymers | 38388067 | 2024 May 01 |
| Sustained and Localized Drug Depot Release Using Radiation-Activated Scintillating Nanoparticles. | Kang, Mikyung; Quintana, Jeremy; Hu, Huiyu; Teixeira, Verônica C; Olberg, Sven; Banla, Leou Ismael; Rodriguez, Victoria; Hwang, William L; Schuemann, Jan; Parangi, Sareh; Weissleder, Ralph; Miller, Miles A | Advanced materials (Deerfield Beach, Fla.) | 38389502 | 2024 Jun |
| "As a patient I do not belong to the clinic, I belong to the community." Co-developing a multi-level, person-centred tuberculosis stigma intervention in Cape Town, South Africa. | Hayward, Sally E; Vanqa, Nosivuyile; Makanda, Goodman; Tisile, Phumeza; Ngwatyu, Luthando; Foster, Isabel; Mcinziba, Abenathi; Biewer, Amanda; Mbuyamba, Rachel; Galloway, Michelle; Bunyula, Siyavuya; Westhuizen, Helene-Mari; Friedland, Jon S; Marino-Medina, Andrew; Viljoen, Lario; Schoeman, Ingrid; Hoddinott, Graeme; Nathavitharana, Ruvandhi R | Research square | 38405783 | 2024 Feb 08 |
| GABA co-released from striatal dopamine axons dampens phasic dopamine release through autoregulatory GABAA receptors. | Patel, Jyoti C; Sherpa, Ang D; Melani, Riccardo; Witkovsky, Paul; Wiseman, Madeline R; O'Neill, Brian; Aoki, Chiye; Tritsch, Nicolas X; Rice, Margaret E | Cell reports | 38431842 | 2024 Mar 26 |
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| Building a two-way street between cell biology and machine learning. | Uhler, Caroline | Nature cell biology | 38228823 | 2024 Jan |
| ATM-deficiency-induced microglial activation promotes neurodegeneration in ataxia-telangiectasia. | Lai, Jenny; Demirbas, Didem; Kim, Junho; Jeffries, Ailsa M; Tolles, Allie; Park, Junseok; Chittenden, Thomas W; Buckley, Patrick G; Yu, Timothy W; Lodato, Michael A; Lee, Eunjung Alice | Cell reports | 38159274 | 2024 Jan 23 |
| microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data. | Zuffa, Simone; Schmid, Robin; Bauermeister, Anelize; P Gomes, Paulo Wender; Caraballo-Rodriguez, Andres M; El Abiead, Yasin; Aron, Allegra T; Gentry, Emily C; Zemlin, Jasmine; Meehan, Michael J; Avalon, Nicole E; Cichewicz, Robert H; Buzun, Ekaterina; Terrazas, Marvic Carrillo; Hsu, Chia-Yun; Oles, Renee; Ayala, Adriana Vasquez; Zhao, Jiaqi; Chu, Hiutung; Kuijpers, Mirte C M; Jackrel, Sara L; Tugizimana, Fidele; Nephali, Lerato Pertunia; Dubery, Ian A; Madala, Ntakadzeni Edwin; Moreira, Eduarda Antunes; Costa-Lotufo, Leticia Veras; Lopes, Norberto Peporine; Rezende-Teixeira, Paula; Jimenez, Paula C; Rimal, Bipin; Patterson, Andrew D; Traxler, Matthew F; Pessotti, Rita de Cassia; Alvarado-Villalobos, Daniel; Tamayo-Castillo, Giselle; Chaverri, Priscila; Escudero-Leyva, Efrain; Quiros-Guerrero, Luis-Manuel; Bory, Alexandre Jean; Joubert, Juliette; Rutz, Adriano; Wolfender, Jean-Luc; Allard, Pierre-Marie; Sichert, Andreas; Pontrelli, Sammy; Pullman, Benjamin S; Bandeira, Nuno; Gerwick, William H; Gindro, Katia; Massana-Codina, Josep; Wagner, Berenike C; Forchhammer, Karl; Petras, Daniel; Aiosa, Nicole; Garg, Neha; Liebeke, Manuel; Bourceau, Patric; Kang, Kyo Bin; Gadhavi, Henna; de Carvalho, Luiz Pedro Sorio; Silva Dos Santos, Mariana; Pérez-Lorente, Alicia Isabel; Molina-Santiago, Carlos; Romero, Diego; Franke, Raimo; Brönstrup, Mark; Vera Ponce de León, Arturo; Pope, Phillip Byron; La Rosa, Sabina Leanti; La Barbera, Giorgia; Roager, Henrik M; Laursen, Martin Frederik; Hammerle, Fabian; Siewert, Bianka; Peintner, Ursula; Licona-Cassani, Cuauhtemoc; Rodriguez-Orduña, Lorena; Rampler, Evelyn; Hildebrand, Felina; Koellensperger, Gunda; Schoeny, Harald; Hohenwallner, Katharina; Panzenboeck, Lisa; Gregor, Rachel; O'Neill, Ellis Charles; Roxborough, Eve Tallulah; Odoi, Jane; Bale, Nicole J; Ding, Su; Sinninghe Damsté, Jaap S; Guan, Xue Li; Cui, Jerry J; Ju, Kou-San; Silva, Denise Brentan; Silva, Fernanda Motta Ribeiro; da Silva, Gilvan Ferreira; Koolen, Hector H F; Grundmann, Carlismari; Clement, Jason A; Mohimani, Hosein; Broders, Kirk; McPhail, Kerry L; Ober-Singleton, Sidnee E; Rath, Christopher M; McDonald, Daniel; Knight, Rob; Wang, Mingxun; Dorrestein, Pieter C | Nature microbiology | 38316926 | 2024 Feb |
| Convergence of coronary artery disease genes onto endothelial cell programs. | Schnitzler, Gavin R; Kang, Helen; Fang, Shi; Angom, Ramcharan S; Lee-Kim, Vivian S; Ma, X Rosa; Zhou, Ronghao; Zeng, Tony; Guo, Katherine; Taylor, Martin S; Vellarikkal, Shamsudheen K; Barry, Aurelie E; Sias-Garcia, Oscar; Bloemendal, Alex; Munson, Glen; Guckelberger, Philine; Nguyen, Tung H; Bergman, Drew T; Hinshaw, Stephen; Cheng, Nathan; Cleary, Brian; Aragam, Krishna; Lander, Eric S; Finucane, Hilary K; Mukhopadhyay, Debabrata; Gupta, Rajat M; Engreitz, Jesse M | Nature | 38326615 | 2024 Feb |
| The Intersections of COVID-19, HIV, and Race/Ethnicity: Machine Learning Methods to Identify and Model Risk Factors for Severe COVID-19 in a Large U.S. National Dataset. | Kunz, Miranda; Rott, Kollin W; Hurwitz, Eric; Kunisaki, Ken; Sun, Jing; Wilkins, Kenneth J; Islam, Jessica Y; Patel, Rena; Safo, Sandra E; National Covid Cohort Collaborative (N3C) Consortium | AIDS and behavior | 38326668 | 2024 Feb 07 |
| An experimental census of retrons for DNA production and genome editing. | Khan, Asim G; Rojas-Montero, Matías; González-Delgado, Alejandro; Lopez, Santiago C; Fang, Rebecca F; Shipman, Seth L | bioRxiv : the preprint server for biology | 38328236 | 2024 Jan 26 |
| Digitally Diagnosing Multiple Developmental Delays Using Crowdsourcing Fused With Machine Learning: Protocol for a Human-in-the-Loop Machine Learning Study. | Jaiswal, Aditi; Kruiper, Ruben; Rasool, Abdur; Nandkeolyar, Aayush; Wall, Dennis P; Washington, Peter | JMIR research protocols | 38329783 | 2024 Feb 08 |
| BRD4-mediated epigenetic regulation of endoplasmic reticulum-mitochondria contact sites is governed by the mitochondrial complex III. | Chen, Brandon; Lynn-Nguyen, Theophilus M; Jadhav, Pankaj; Halligan, Benjamin S; Rossiter, Nicholas J; Guerra, Rachel M; Koshkin, Sergei; Koo, Imhoi; Morlacchi, Pietro; Hanna, David A; Lin, Jason; Banerjee, Ruma; Pagliarini, David J; Patterson, Andrew D; Mosalaganti, Shyamal; Sexton, Jonathan Z; Calì, Tito; Lyssiotis, Costas A; Shah, Yatrik M | bioRxiv : the preprint server for biology | 38352460 | 2024 Feb 04 |
| Association of semaglutide with risk of suicidal ideation in a real-world cohort. | Wang, William; Volkow, Nora D; Berger, Nathan A; Davis, Pamela B; Kaelber, David C; Xu, Rong | Nature medicine | 38182782 | 2024 Jan |
| A Low-Noise Low-Power 0.001Hz-1kHz Neural Recording System-on-Chip With Sample-Level Duty-Cycling. | Wu, Jiajia; Akinin, Abraham; Somayajulu, Jonathan; Lee, Min S; Paul, Akshay; Lu, Hongyu; Park, Yongjae; Kim, Seong-Jin; Mercier, Patrick P; Cauwenberghs, Gert | IEEE transactions on biomedical circuits and systems | 38408002 | 2024 Apr |
| Loss of GTF2I promotes neuronal apoptosis and synaptic reduction in human cellular models of neurodevelopment. | Adams, Jason W; Vinokur, Annabelle; de Souza, Janaína S; Austria, Charles; Guerra, Bruno S; Herai, Roberto H; Wahlin, Karl J; Muotri, Alysson R | Cell reports | 38416640 | 2024 Mar 26 |
| High-density transparent graphene arrays for predicting cellular calcium activity at depth from surface potential recordings. | Ramezani, Mehrdad; Kim, Jeong-Hoon; Liu, Xin; Ren, Chi; Alothman, Abdullah; De-Eknamkul, Chawina; Wilson, Madison N; Cubukcu, Ertugrul; Gilja, Vikash; Komiyama, Takaki; Kuzum, Duygu | Nature nanotechnology | 38212523 | 2024 Apr |
| APOL1-mediated monovalent cation transport contributes to APOL1-mediated podocytopathy in kidney disease. | Datta, Somenath; Antonio, Brett M; Zahler, Nathan H; Theile, Jonathan W; Krafte, Doug; Zhang, Hengtao; Rosenberg, Paul B; Chaves, Alec B; Muoio, Deborah M; Zhang, Guofang; Silas, Daniel; Li, Guojie; Soldano, Karen; Nystrom, Sarah; Ferreira, Davis; Miller, Sara E; Bain, James R; Muehlbauer, Michael J; Ilkayeva, Olga; Becker, Thomas C; Hohmeier, Hans-Ewald; Newgard, Christopher B; Olabisi, Opeyemi A | The Journal of clinical investigation | 38227370 | 2024 Jan 16 |
| Engineered CRISPR-Cas12a for higher-order combinatorial chromatin perturbations. | Hsiung, C C-S; Wilson, C M; Sambold, N A; Dai, R; Chen, Q; Teyssier, N; Misiukiewicz, S; Arab, A; O'Loughlin, T; Cofsky, J C; Shi, J; Gilbert, L A | Nature biotechnology | 38760567 | 2024 May 17 |
| A Panoramic View of Cell Population Dynamics in Mammalian Aging. | Zhang, Zehao; Schaefer, Chloe; Jiang, Weirong; Lu, Ziyu; Lee, Jasper; Sziraki, Andras; Abdulraouf, Abdulraouf; Wick, Brittney; Haeussler, Maximilian; Li, Zhuoyan; Molla, Gesmira; Satija, Rahul; Zhou, Wei; Cao, Junyue | bioRxiv : the preprint server for biology | 38496474 | 2024 Mar 05 |
| Amyloid fibril polymorphism in the heart of an ATTR amyloidosis patient with polyneuropathy attributed to the V122Δ variant. | Ahmed, Yasmin; Nguyen, Binh An; Afrin, Shumaila; Singh, Virender; Evers, Bret; Singh, Preeti; Pedretti, Rose; Wang, Lanie; Bassett, Parker; Del Carmen Fernandez-Ramirez, Maria; Pekala, Maja; Kluve-Beckerman, Barbara; Saelices, Lorena | bioRxiv : the preprint server for biology | 38766262 | 2024 May 10 |
| Contrasting somatic mutation patterns in aging human neurons and oligodendrocytes. | Ganz, Javier; Luquette, Lovelace J; Bizzotto, Sara; Miller, Michael B; Zhou, Zinan; Bohrson, Craig L; Jin, Hu; Tran, Antuan V; Viswanadham, Vinayak V; McDonough, Gannon; Brown, Katherine; Chahine, Yasmine; Chhouk, Brian; Galor, Alon; Park, Peter J; Walsh, Christopher A | Cell | 38503282 | 2024 Apr 11 |
| Axonal organelle buildup from loss of AP-4 complex function causes exacerbation of amyloid plaque pathology and gliosis in Alzheimer's disease mouse model. | Orlowski, Alex; Karippaparambil, Joseph; Paumier, Jean-Michel; Ghanta, Shraddha; Pallares, Eduardo; Tandukar, Jamuna; Gao, Ruixuan; Gowrishankar, Swetha | bioRxiv : the preprint server for biology | 38617351 | 2024 Apr 01 |
| Improving Biological Joint Moment Estimation During Real-World Tasks With EMG and Instrumented Insoles. | Scherpereel, Keaton L; Molinaro, Dean D; Shepherd, Max K; Inan, Omer T; Young, Aaron J | IEEE transactions on bio-medical engineering | 38619965 | 2024 Sep |
| NTCA Guidelines for Respiratory Isolation and Restrictions to Reduce Transmission of Pulmonary Tuberculosis in Community Settings. | Shah, Maunank; Dansky, Zoe; Nathavitharana, Ruvandhi; Behm, Heidi; Brown, Shaka; Dov, Lana; Fortune, Diana; Gadon, Nicole Linda; Gardner Toren, Katelynne; Graves, Susannah; Haley, Connie A; Kates, Olivia; Sabuwala, Nadya; Wegener, Donna; Yoo, Kathryn; Burzynski, Joseph | Clinical infectious diseases : an official publication of the Infectious Diseases Society of America | 38632829 | 2024 Apr 18 |
| Keratin 17 is a prognostic and predictive biomarker in pancreatic ductal adenocarcinoma. | Delgado-Coka, Lyanne A; Roa-Peña, Lucia; Babu, Sruthi; Horowitz, Michael; Petricoin 3rd, Emanuel F; Matrisian, Lynn M; Blais, Edik M; Marchenko, Natalia; Allard, Felicia D; Akalin, Ali; Jiang, Wei; Larson, Brent K; Hendifar, Andrew E; Picozzi, Vincent J; Choi, Minsig; Shroyer, Kenneth R; Escobar-Hoyos, Luisa F | American journal of clinical pathology | 38642081 | 2024 Sep 03 |
| An accurate and rapidly calibrating speech neuroprosthesis. | Card, Nicholas S; Wairagkar, Maitreyee; Iacobacci, Carrina; Hou, Xianda; Singer-Clark, Tyler; Willett, Francis R; Kunz, Erin M; Fan, Chaofei; Nia, Maryam Vahdati; Deo, Darrel R; Srinivasan, Aparna; Choi, Eun Young; Glasser, Matthew F; Hochberg, Leigh R; Henderson, Jaimie M; Shahlaie, Kiarash; Brandman, David M; Stavisky, Sergey D | medRxiv : the preprint server for health sciences | 38645254 | 2024 Apr 10 |
| Condensate-Promoting ENL Mutation Drives Tumorigenesis In Vivo Through Dynamic Regulation of Histone Modifications and Gene Expression. | Liu, Yiman; Li, Qinglan; Song, Lele; Gong, Chujie; Tang, Sylvia; Budinich, Krista A; Vanderbeck, Ashley; Mathias, Kaeli M; Wertheim, Gerald B; Nguyen, Son C; Outen, Riley; Joyce, Eric F; Maillard, Ivan; Wan, Liling | Cancer discovery | 38655899 | 2024 Aug 02 |
| De novo identification of CD4+ T cell epitopes. | Zdinak, Paul M; Trivedi, Nishtha; Grebinoski, Stephanie; Torrey, Jessica; Martinez, Eduardo Zarate; Martinez, Salome; Hicks, Louise; Ranjan, Rashi; Makani, Venkata Krishna Kanth; Roland, Mary Melissa; Kublo, Lyubov; Arshad, Sanya; Anderson, Mark S; Vignali, Dario A A; Joglekar, Alok V | Nature methods | 38658646 | 2024 May |
| Whole-cortex in situ sequencing reveals input-dependent area identity. | Chen, Xiaoyin; Fischer, Stephan; Rue, Mara C P; Zhang, Aixin; Mukherjee, Didhiti; Kanold, Patrick O; Gillis, Jesse; Zador, Anthony M | Nature | 38658747 | 2024 Apr 24 |
| A fine kinetic balance of interactions directs transcription factor hubs to genes. | Mukherjee, Apratim; Fallacaro, Samantha; Ratchasanmuang, Puttachai; Zinski, Joseph; Boka, Alan; Shankta, Kareena; Mir, Mustafa | bioRxiv : the preprint server for biology | 38659757 | 2024 Apr 16 |
| Nuclear speckle rejuvenation alleviates proteinopathies at the expense of YAP1. | Dion, William; Tao, Yuren; Chambers, Maci; Zhao, Shanshan; Arbuckle, Riley K; Sun, Michelle; Kubra, Syeda; Nie, Yuhang; Ye, Megan; Larsen, Mads B; Camarco, Daniel; Ickes, Eleanor; DuPont, Claire; Wang, Haokun; Wang, Bingjie; Liu, Silvia; Pi, Shaohua; Chen, Bill B; Chen, Yuanyuan; Chen, Xu; Zhu, Bokai | bioRxiv : the preprint server for biology | 38659924 | 2024 Apr 21 |
| Alteration of mechanical stresses in the murine brain by age and hemorrhagic stroke. | Zheng, Siyi; Banerji, Rohin; LeBourdais, Rob; Zhang, Sue; DuBois, Eric; O'Shea, Timothy; Nia, Hadi T | PNAS nexus | 38659974 | 2024 Apr |
| Long-term expandable mouse and human-induced nephron progenitor cells enable kidney organoid maturation and modeling of plasticity and disease. | Huang, Biao; Zeng, Zipeng; Kim, Sunghyun; Fausto, Connor C; Koppitch, Kari; Li, Hui; Li, Zexu; Chen, Xi; Guo, Jinjin; Zhang, Chennan C; Ma, Tianyi; Medina, Pedro; Schreiber, Megan E; Xia, Mateo W; Vonk, Ariel C; Xiang, Tianyuan; Patel, Tadrushi; Li, Yidan; Parvez, Riana K; Der, Balint; Chen, Jyun Hao; Liu, Zhenqing; Thornton, Matthew E; Grubbs, Brendan H; Diao, Yarui; Dou, Yali; Gnedeva, Ksenia; Ying, Qilong; Pastor-Soler, Nuria M; Fei, Teng; Hallows, Kenneth R; Lindström, Nils O; McMahon, Andrew P; Li, Zhongwei | Cell stem cell | 38692273 | 2024 Jun 06 |
| DengueSeq: a pan-serotype whole genome amplicon sequencing protocol for dengue virus. | Vogels, Chantal B F; Hill, Verity; Breban, Mallery I; Chaguza, Chrispin; Paul, Lauren M; Sodeinde, Afeez; Taylor-Salmon, Emma; Ott, Isabel M; Petrone, Mary E; Dijk, Dennis; Jonges, Marcel; Welkers, Matthijs R A; Locksmith, Timothy; Dong, Yibo; Tarigopula, Namratha; Tekin, Omer; Schmedes, Sarah; Bunch, Sylvia; Cano, Natalia; Jaber, Rayah; Panzera, Charles; Stryker, Ian; Vergara, Julieta; Zimler, Rebecca; Kopp, Edgar; Heberlein, Lea; Herzog, Kaylee S; Fauver, Joseph R; Morrison, Andrea M; Michael, Scott F; Grubaugh, Nathan D | BMC genomics | 38693476 | 2024 May 01 |
| Methylmalonic acid's potential as a prognostic indicator for cancer-related mortality. | Gomes, Ana P | The American journal of clinical nutrition | 38702108 | 2024 May |
| From darkness to discovery: evolutionary, adaptive, and translational genetic insights from cavefish. | Swaminathan, Amruta; Xia, Fanning; Rohner, Nicolas | Trends in genetics : TIG | 38707509 | 2024 Jan |
| Evidence of compensatory neural hyperactivity in a subgroup of chemotherapy-treated breast cancer survivors and its association with brain aging. | Mulholland, Michele M; Stuifbergen, Alexa; De La Torre Schutz, Alexa; Franco Rocha, Oscar Y; Blayney, Douglas W; Kesler, Shelli R | medRxiv : the preprint server for health sciences | 38712178 | 2024 Apr 22 |
| Behavioral control through the direct, focal silencing of neuronal activity. | Elleman, Anna V; Milicic, Nikola; Williams, Damian J; Simko, Jane; Liu, Christine J; Haynes, Allison L; Ehrlich, David E; Makinson, Christopher D; Du Bois, J | Cell chemical biology | 38729162 | 2024 Jul 18 |
| Hypnotic treatment improves sleep architecture and EEG disruptions and rescues memory deficits in a mouse model of fragile X syndrome. | Martinez, Jessy D; Wilson, Lydia G; Brancaleone, William P; Peterson, Kathryn G; Popke, Donald S; Garzon, Valentina Caicedo; Perez Tremble, Roxanne E; Donnelly, Marcus J; Mendez Ortega, Stephany L; Torres, Daniel; Shaver, James J; Jiang, Sha; Yang, Zhongying; Aton, Sara J | Cell reports | 38787724 | 2024 Jun 25 |
| Natural phasic inhibition of dopamine neurons signals cognitive rigidity. | Burwell, Sasha C V; Yan, Haidun; Lim, Shaun S X; Shields, Brenda C; Tadross, Michael R | bioRxiv : the preprint server for biology | 38766037 | 2024 Jul 13 |
| Advancing in vivo reprogramming with synthetic biology. | Islam, Farhana; Lewis, Mitchell R; Craig, James D; Leyendecker, Peyton M; Deans, Tara L | Current opinion in biotechnology | 38520824 | 2024 Jun |
| Autofluorescence is a biomarker of neural stem cell activation state. | Morrow, Christopher S; Tweed, Kelsey; Farhadova, Sabina; Walsh, Alex J; Lear, Bo P; Roopra, Avtar; Risgaard, Ryan D; Klosa, Payton C; Arndt, Zachary P; Peterson, Ella R; Chi, Michelle M; Harris, Allison G; Skala, Melissa C; Moore, Darcie L | Cell stem cell | 38521057 | 2024 Apr 04 |
| Engineering vascularized skin-mimetic phantom for non-invasive Raman spectroscopy. | Raj, Piyush; Wu, Lintong; Arora, Saransh; Bhatt, Raj; Zuo, Yi; Fang, Zhiwei; Verdoold, Remco; Koch, Tanja; Gu, Luo; Barman, Ishan | Sensors and actuators. B, Chemical | 38524639 | 2024 Apr 01 |
| High allelic diversity in Arabidopsis NLRs is associated with distinct genomic features. | Sutherland, Chandler A; Prigozhin, Daniil M; Monroe, J Grey; Krasileva, Ksenia V | EMBO reports | 38528170 | 2024 May |
| Rugged fitness landscapes minimize promiscuity in the evolution of transcriptional repressors. | Meger, Anthony T; Spence, Matthew A; Sandhu, Mahakaran; Matthews, Dana; Chen, Jackie; Jackson, Colin J; Raman, Srivatsan | Cell systems | 38537640 | 2024 Apr 17 |
| Advancing preclinical drug evaluation through automated 3D imaging for high-throughput screening with kidney organoids. | Oishi, Haruka; Tabibzadeh, Nahid; Morizane, Ryuji | Biofabrication | 38547531 | 2024 Apr 08 |
| INGEsT: An Open-Source Behavioral Setup for Studying Self-motivated Ingestive Behavior and Learned Operant Behavior. | Zhao, Zhe; Xu, Binbin; Loomis, Cody L; Anthony, Skylar A; McKie, Isaac; Srigiriraju, Abhishikta; Bolton, McLean; Stern, Sarah A | bioRxiv : the preprint server for biology | 38558985 | 2024 Mar 12 |
| Great expectations: Aligning visual prosthetic development with implantee needs. | Nadolskis, Lucas Gil; Turkstra, Lily Marie; Larnyo, Ebenezer; Beyeler, Michael | medRxiv : the preprint server for health sciences | 38559196 | 2024 Mar 14 |
| Polyphosphate affects cytoplasmic and chromosomal dynamics in nitrogen-starved Pseudomonas aeruginosa. | Magkiriadou, Sofia; Stepp, Willi L; Newman, Dianne K; Manley, Suliana; Racki, Lisa R | Proceedings of the National Academy of Sciences of the United States of America | 38564631 | 2024 Apr 09 |
| Planting a chemical flag on antigens. | Kunjapur, Aditya M | Science (New York, N.Y.) | 38574130 | 2024 Apr 05 |
| Intracellular pH regulates β-catenin with low pHi increasing adhesion and signaling functions. | Czowski, Brandon J; White, Katharine A | bioRxiv : the preprint server for biology | 38585883 | 2024 Mar 27 |
| Molecular phenotyping of small cell lung cancer using targeted cfDNA profiling of transcriptional regulatory regions. | Hiatt, Joseph B; Doebley, Anna-Lisa; Arnold, Henry U; Adil, Mohamed; Sandborg, Holly; Persse, Thomas W; Ko, Minjeong; Wu, Feinan; Quintanal Villalonga, Alvaro; Santana-Davila, Rafael; Eaton, Keith; Dive, Caroline; Rudin, Charles M; Thomas, Anish; Houghton, A McGarry; Ha, Gavin; MacPherson, David | Science advances | 38598634 | 2024 Apr 12 |
| Characterizing mobility patterns and malaria risk factors in semi-nomadic populations of Northern Kenya. | Meredith, Hannah R; Wesolowski, Amy; Okoth, Dennis; Maraga, Linda; Ambani, George; Chepkwony, Tabitha; Abel, Lucy; Kipkoech, Joseph; Lokoel, Gilchrist; Esimit, Daniel; Lokemer, Samuel; Maragia, James; Prudhomme O'Meara, Wendy; Obala, Andrew A | PLOS global public health | 38478562 | 2024 |
| PET Imaging for Monitoring Cellular and Immunotherapy of Cancer. | Larimer, Benjamin M | Cancer journal (Sudbury, Mass.) | 38753749 | 2024 May-Jun 01 |
| Influence of ionizable lipid tail length on lipid nanoparticle delivery of mRNA of varying length. | Mrksich, Kaitlin; Padilla, Marshall S; Joseph, Ryann A; Han, Emily L; Kim, Dongyoon; Palanki, Rohan; Xu, Junchao; Mitchell, Michael J | Journal of biomedical materials research. Part A | 38487970 | 2024 Sep |
| Rapid, biochemical tagging of cellular activity history in vivo. | Zhang, Run; Anguiano, Maribel; Aarrestad, Isak K; Lin, Sophia; Chandra, Joshua; Vadde, Sruti S; Olson, David E; Kim, Christina K | bioRxiv : the preprint server for biology | 38798353 | 2024 May 14 |
| ATTRv-V30M Type A amyloid fibrils from heart and nerves exhibit structural homogeneity. | Nguyen, Binh An; Afrin, Shumaila; Yakubovska, Anna; Singh, Virender; Alicea, Jaime Vaquer; Kunach, Peter; Singh, Preeti; Pekala, Maja; Ahmed, Yasmin; Fernandez-Ramirez, Maria Del Carmen; Hernandez, Luis O Cabrera; Pedretti, Rose; Bassett, Parker; Wang, Lanie; Lemoff, Andrew; Villalon, Layla; Kluve-Beckerman, Barbara; Saelices, Lorena | bioRxiv : the preprint server for biology | 38798361 | 2024 May 14 |
| Clarifying Mendelian vs non-Mendelian inheritance. | Strome, Susan; Bhalla, Needhi; Kamakaka, Rohinton; Sharma, Upasna; Sullivan, William | Genetics | 38805696 | 2024 Jul 08 |
| Different state-dependence of population codes across cortex. | Bandi, Akhil C; Runyan, Caroline A | bioRxiv : the preprint server for biology | 38826351 | 2024 May 26 |
| Conserved Cis-Acting Range Extender Element Mediates Extreme Long-Range Enhancer Activity in Mammals. | Bower, Grace; Hollingsworth, Ethan W; Jacinto, Sandra; Clock, Benjamin; Cao, Kaitlyn; Liu, Mandy; Dziulko, Adam; Alcaina-Caro, Ana; Xu, Qianlan; Skowronska-Krawczyk, Dorota; Lopez-Rios, Javier; Dickel, Diane E; Bardet, Anaïs F; Pennacchio, Len A; Visel, Axel; Kvon, Evgeny Z | bioRxiv : the preprint server for biology | 38826394 | 2024 May 26 |
| A parameterized two-domain thermodynamic model explains diverse mutational effects on protein allostery. | Liu, Zhuang; Gillis, Thomas G; Raman, Srivatsan; Cui, Qiang | eLife | 38836839 | 2024 Jun 05 |
| The relationship of rate and pause features to the communicative participation of people living with ALS. | Connaghan, Kathryn P; Green, Jordan R; Eshghi, Marziye; Haenssler, Abigail E; Scheier, Zoe A; Clark, Alison; Iyer, Amrita; Richburg, Brian D; Rowe, Hannah P; Okada, June; Johnson, Stephen A; Onnela, Jukka-Pekka; Burke, Katherine M; Berry, James D | Muscle & nerve | 38837773 | 2024 Aug |
| The genetic engineering Swiss army knife. | King, Madeleine B; Perry, Kayla N; McAndrew, Mitchell J; Lapinaite, Audrone | Nature chemistry | 38844636 | 2024 Jun |
| Isthmus progenitor cells contribute to homeostatic cellular turnover and support regeneration following intestinal injury. | Malagola, Ermanno; Vasciaveo, Alessandro; Ochiai, Yosuke; Kim, Woosook; Zheng, Biyun; Zanella, Luca; Wang, Alexander L E; Middelhoff, Moritz; Nienhüser, Henrik; Deng, Lu; Wu, Feijing; Waterbury, Quin T; Belin, Bryana; LaBella, Jonathan; Zamechek, Leah B; Wong, Melissa H; Li, Linheng; Guha, Chandan; Cheng, Chia-Wei; Yan, Kelley S; Califano, Andrea; Wang, Timothy C | Cell | 38848678 | 2024 Jun 06 |
| Mechanobiological Modulation of In Vitro Astrocyte Reactivity Using Variable Gel Stiffness. | C Benincasa, Julia; Madias, Marianne I; Kandell, Rebecca M; Delgado-Garcia, Lina M; Engler, Adam J; Kwon, Ester J; Porcionatto, Marimelia A | ACS biomaterials science & engineering | 38870483 | 2024 Jul 08 |
| Branched-Tail Lipid Nanoparticles for Intravenous mRNA Delivery to Lung Immune, Endothelial, and Alveolar Cells in Mice. | Petersen, Daria M Strelkova; Weiss, Ryan M; Hajj, Khalid A; Yerneni, Saigopalakrishna S; Chaudhary, Namit; Newby, Alexandra N; Arral, Mariah L; Whitehead, Kathryn A | Advanced healthcare materials | 38888972 | 2024 Sep |
| Identification and characterization of a human MORC2 DNA binding region that is required for gene silencing. | Fendler, Nikole L; Ly, Jimmy; Welp, Luisa; Urlaub, Henning; Vos, Seychelle M | bioRxiv : the preprint server for biology | 38895295 | 2024 Jun 06 |
| A large-scale type I CBASS antiphage screen identifies the phage prohead protease as a key determinant of immune activation and evasion. | Richmond-Buccola, Desmond; Hobbs, Samuel J; Garcia, Jasmine M; Toyoda, Hunter; Gao, Jingjing; Shao, Sichen; Lee, Amy S Y; Kranzusch, Philip J | Cell host & microbe | 38917809 | 2024 Jul 10 |
| Spatial mapping of mobile genetic elements and their bacterial hosts in complex microbiomes. | Grodner, Benjamin; Shi, Hao; Farchione, Owen; Vill, Albert C; Ntekas, Ioannis; Diebold, Peter J; Wu, David T; Chen, Chia-Yu; Kim, David M; Zipfel, Warren R; Brito, Ilana L; De Vlaminck, Iwijn | Nature microbiology | 38918467 | 2024 Sep |
| Coaching ribosome biogenesis from the nuclear periphery. | Zhuang, Yinyin; Guo, Xiangfu; Razorenova, Olga V; Miles, Christopher E; Zhao, Wenting; Shi, Xiaoyu | bioRxiv : the preprint server for biology | 38948754 | 2024 Jun 22 |
| Variation in season length and development time is sufficient to drive the emergence and coexistence of social and solitary behavioral strategies. | Ruttenberg, Dee M; Levin, Simon A; Wingreen, Ned S; Kocher, Sarah D | bioRxiv : the preprint server for biology | 38948882 | 2024 Jun 22 |
| Three-dimensional fiber orientation mapping of the human brain at micrometer resolution. | Liu, Chao J; Ammon, William; Jones, Robert J; Nolan, Jackson C; Gong, Dayang; Maffei, Chiara; Edlow, Brian L; Augustinack, Jean C; Magnain, Caroline; Yendiki, Anastasia; Villiger, Martin; Fischl, Bruce; Wang, Hui | Research square | 39149445 | 2024 Aug 07 |
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| Unleashing the power of biomaterials to enhance organoid differentiation and function. | Musah, Samira; Arzaghi, Hamidreza | Nature methods | 39179910 | 2024 Sep |
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| Molecular consequences of acute versus chronic CDK12 loss in prostate carcinoma nominates distinct therapeutic strategies. | Frank, Sander; Persse, Thomas; Coleman, Ilsa; Bankhead 3rd, Armand; Li, Dapei; De-Sarkar, Navonil; Wilson, Divin; Rudoy, Dmytro; Vashisth, Manasvita; Galipeau, Patty; Yang, Michael; Hanratty, Brian; Dumpit, Ruth; Morrissey, Colm; Corey, Eva; Montgomery, R Bruce; Haffner, Michael C; Pritchard, Colin; Vasioukhin, Valera; Ha, Gavin; Nelson, Peter S | bioRxiv : the preprint server for biology | 39071291 | 2024 Jul 19 |
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| High-affinity agonism at the P2X7 receptor is mediated by three residues outside the orthosteric pocket. | Oken, Adam C; Lisi, Nicolas E; Krishnamurthy, Ipsita; McCarthy, Alanna E; Godsey, Michael H; Glasfeld, Arthur; Mansoor, Steven E | Nature communications | 39107314 | 2024 Aug 06 |
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| Saturation transposon mutagenesis enables genome-wide identification of genes required for growth and fluconazole resistance in the human fungal pathogen Cryptococcus neoformans. | Billmyre, R Blake; Craig, Caroline J; Lyon, Joshua; Reichardt, Claire; Eickbush, Michael T; Zanders, Sarah E | bioRxiv : the preprint server for biology | 39131341 | 2024 Aug 06 |
| Determining mesoscale chromatin structure parameters from spatially correlated cleavage data using a coarse-grained oligonucleosome model. | Clerkin, Ariana Brenner; Pagane, Nicole; West, Devany W; Spakowitz, Andrew J; Risca, Viviana I | bioRxiv : the preprint server for biology | 39131347 | 2024 Jul 29 |
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| Efficient chromosome capture requires a bias in the 'search-and-capture' process during mitotic-spindle assembly. | Wollman, R; Cytrynbaum, E N; Jones, J T; Meyer, T; Scholey, J M; Mogilner, A | Current biology : CB.. | 15886100 | 2005 May 10; |
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| The diverse functions of CD1d-restricted NKT cells and their potential for immunotherapy. | Yu, Karl O A; Porcelli, Steven A | Immunology letters.. | 16083968 | 2005 Aug 15; |
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| Investigating bacterial N-linked glycosylation: synthesis and glycosyl acceptor activity of the undecaprenyl pyrophosphate-linked bacillosamine. | Weerapana, Eranthie; Glover, Kerney Jebrell; Chen, Mark M; Imperiali, Barbara | Journal of the American Chemical Society. | 16201778 | 2005 Oct 12; |
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| The bovine CD1 family contains group 1 CD1 proteins, but no functional CD1d. | Van Rhijn, Ildiko; Koets, Ad P; Im, Jin Seon; Piebes, Diewertje; Reddington, Faye; Besra, Gurdyal S; Porcelli, Steven A; van Eden, Willem; Rutten, Victor P M G | Journal of immunology (Baltimore, Md. : 1950). | 16585584 | 2006 Apr 15; |
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| Alcohol consumption patterns among pregnant women in the Moscow region of the Russian Federation. | Chambers, Christina D; Kavteladze, Lela; Joutchenko, Loudmila; Bakhireva, Ludmila N; Jones, Kenneth Lyons | Alcohol (Fayetteville, N.Y.). | 16905438 | 2006 Apr; |
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| A homotetrameric kinesin-5, KLP61F, bundles microtubules and antagonizes Ncd in motility assays. | Tao, Li; Mogilner, Alex; Civelekoglu-Scholey, Gul; Wollman, Roy; Evans, James; Stahlberg, Henning; Scholey, Jonathan M | Current biology : CB. | 17141610 | 2006 Dec 5; |
| The chemokine receptor CXCR3 attenuates the control of chronic Mycobacterium tuberculosis infection in BALB/c mice. | Chakravarty, Soumya D; Xu, Jiayong; Lu, Bao; Gerard, Craig; Flynn, Joanne; Chan, John | Journal of immunology (Baltimore, Md. : 1950). | 17237422 | 2007 Feb 1; |
| Analysis of organophosphorus pesticides in dried ground ginseng root by capillary gas chromatography-mass spectrometry and -flame photometric detection. | Wong, Jon W; Hennessy, Michael K; Hayward, Douglas G; Krynitsky, Alexander J; Cassias, Irene; Schenck, Frank J | Journal of agricultural and food chemistry | 17249685 | 2007 Feb 21 |
| Deletion of kasB in Mycobacterium tuberculosis causes loss of acid-fastness and subclinical latent tuberculosis in immunocompetent mice. | Bhatt, Apoorva; Fujiwara, Nagatoshi; Bhatt, Kiranmai; Gurcha, Sudagar S; Kremer, Laurent; Chen, Bing; Chan, John; Porcelli, Steven A; Kobayashi, Kazuo; Besra, Gurdyal S; Jacobs Jr, William R | Proceedings of the National Academy of Sciences of the United States of America. | 17360388 | 2007 Mar 20; |
| Anthrax lethal toxin kills macrophages in a strain-specific manner by apoptosis or caspase-1-mediated necrosis. | Muehlbauer, Stefan M; Evering, Teresa H; Bonuccelli, Gloria; Squires, Raynal C; Ashton, Anthony W; Porcelli, Steven A; Lisanti, Michael P; Brojatsch, Jurgen | Cell cycle (Georgetown, Tex.). | 17374996 | 2007 Mar 15; |
| Aldolase provides an unusual binding site for thrombospondin-related anonymous protein in the invasion machinery of the malaria parasite. | Bosch, Jürgen; Buscaglia, Carlos A; Krumm, Brian; Ingason, Bjarni P; Lucas, Robert; Roach, Claudia; Cardozo, Timothy; Nussenzweig, Victor; Hol, Wim G J | Proceedings of the National Academy of Sciences of the United States of America. | 17426153 | 2007 Apr 24; |
| Production and characterization of monoclonal antibodies against complexes of the NKT cell ligand alpha-galactosylceramide bound to mouse CD1d. | Yu, Karl O A; Im, Jin S; Illarionov, Petr A; Ndonye, Rachel M; Howell, Amy R; Besra, Gurdyal S; Porcelli, Steven A | Journal of immunological methods. | 17442335 | 2007 May 31; |
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| B cells moderate inflammatory progression and enhance bacterial containment upon pulmonary challenge with Mycobacterium tuberculosis. | Maglione, Paul J; Xu, Jiayong; Chan, John | Journal of immunology (Baltimore, Md. : 1950). | 17513771 | 2007 Jun 1; |
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| Enhanced priming of adaptive immunity by a proapoptotic mutant of Mycobacterium tuberculosis. | Hinchey, Joseph; Lee, Sunhee; Jeon, Bo Y; Basaraba, Randall J; Venkataswamy, Manjunatha M; Chen, Bing; Chan, John; Braunstein, Miriam; Orme, Ian M; Derrick, Steven C; Morris, Sheldon L; Jacobs Jr, William R; Porcelli, Steven A | The Journal of clinical investigation. | 17671656 | 2007 Aug; |
| The C. elegans TGF-beta Dauer pathway regulates longevity via insulin signaling. | Shaw, Wendy M; Luo, Shijing; Landis, Jessica; Ashraf, Jasmine; Murphy, Coleen T | Current biology : CB | 17900898 | 2007 Oct 9 |
| Peptide-functionalized poly(ethylene glycol) star polymers: DNA delivery vehicles with multivalent molecular architecture. | Fichter, Katye M; Zhang, Le; Kiick, Kristi L; Reineke, Theresa M | Bioconjugate chemistry. | 17915935 | 2008 Jan; |
| Polyisoprenol specificity in the Campylobacter jejuni N-linked glycosylation pathway. | Chen, Mark M; Weerapana, Eranthie; Ciepichal, Ewa; Stupak, Jacek; Reid, Christopher W; Swiezewska, Ewa; Imperiali, Barbara | Biochemistry. | 18034500 | 2007 Dec 18; |
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| Characterization of a late transitional B cell population highly sensitive to BAFF-mediated homeostatic proliferation. | Meyer-Bahlburg, Almut; Andrews, Sarah F; Yu, Karl O A; Porcelli, Steven A; Rawlings, David J | The Journal of experimental medicine. | 18180309 | 2008 Jan 21; |
| Fc gamma receptors regulate immune activation and susceptibility during Mycobacterium tuberculosis infection. | Maglione, Paul J; Xu, Jiayong; Casadevall, Arturo; Chan, John | Journal of immunology (Baltimore, Md. : 1950). | 18292558 | 2008 Mar 1; |
| Alteration of the relative levels of iNKT cell subsets is associated with chronic mycobacterial infections. | Im, Jin S; Kang, Tae-Jin; Lee, Seong-Beom; Kim, Chi-Hong; Lee, Sang-Haak; Venkataswamy, Manjunatha M; Serfass, Evan R; Chen, Bing; Illarionov, Petr A; Besra, Gurdyal S; Jacobs Jr, William R; Chae, Gue-Tae; Porcelli, Steven A | Clinical immunology (Orlando, Fla.). | 18308638 | 2008 May; |
| Reverse the curse--the role of deubiquitination in cell cycle control. | Song, Ling; Rape, Michael | Current opinion in cell biology | 18346885 | 2008 Apr |
| Entry of herpesviruses into mammalian cells. | Heldwein, E E; Krummenacher, C | Cellular and molecular life sciences : CMLS. | 18351291 | 2008 Jun; |
| Directly reprogrammed fibroblasts show global epigenetic remodeling and widespread tissue contribution. | Maherali, Nimet; Sridharan, Rupa; Xie, Wei; Utikal, Jochen; Eminli, Sarah; Arnold, Katrin; Stadtfeld, Matthias; Yachechko, Robin; Tchieu, Jason; Jaenisch, Rudolf; Plath, Kathrin; Hochedlinger, Konrad | Cell stem cell | 18371336 | 2007 Jun 7 |
| Defining molecular cornerstones during fibroblast to iPS cell reprogramming in mouse. | Stadtfeld, Matthias; Maherali, Nimet; Breault, David T; Hochedlinger, Konrad | Cell stem cell | 18371448 | 2008 Mar 6 |
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| Mitosis: moesin and the importance of being round. | Rosenblatt, Jody | Current biology : CB. | 18397735 | 2008 Apr 8; |
| Caspase-2 cleavage of BID is a critical apoptotic signal downstream of endoplasmic reticulum stress. | Upton, John-Paul; Austgen, Kathryn; Nishino, Mari; Coakley, Kristen M; Hagen, Andrew; Han, Dan; Papa, Feroz R; Oakes, Scott A | Molecular and cellular biology | 18426910 | 2008 Jun |
| Sub-cellular precision on-chip small-animal immobilization, multi-photon imaging and femtosecond-laser manipulation. | Zeng, Fei; Rohde, Christopher B; Yanik, Mehmet Fatih | Lab on a chip | 18432331 | 2008 May |
| Prosthetic systems for therapeutic optical activation and silencing of genetically-targeted neurons. | Bernstein, Jacob G; Han, Xue; Henninger, Michael A; Ko, Emily Y; Qian, Xiaofeng; Franzesi, Giovanni Talei; McConnell, Jackie P; Stern, Patrick; Desimone, Robert; Boyden, Edward S | Proceedings - Society of Photo-Optical Instrumentation Engineers | 18458792 | 2008 |
| Epigenetic mechanisms and the transgenerational effects of maternal care. | Champagne, Frances A | Frontiers in neuroendocrinology | 18462782 | 2008 Jun |
| Reverse engineering of force integration during mitosis in the Drosophila embryo. | Wollman, Roy; Civelekoglu-Scholey, Gul; Scholey, Jonathan M; Mogilner, Alex | Molecular systems biology. | 18463619 | 2008; |
| Plasma pyridoxal 5'-phosphate in the US population: the National Health and Nutrition Examination Survey, 2003-2004. | Morris, Martha Savaria; Picciano, Mary Frances; Jacques, Paul F; Selhub, Jacob | The American journal of clinical nutrition | 18469270 | 2008 May |
| Rapid strengthening of thalamo-amygdala synapses mediates cue-reward learning. | Tye, Kay M; Stuber, Garret D; de Ridder, Bram; Bonci, Antonello; Janak, Patricia H | Nature. | 18469802 | 2008 Jun 26; |
| Mechanism of ubiquitin-chain formation by the human anaphase-promoting complex. | Jin, Lingyan; Williamson, Adam; Banerjee, Sudeep; Philipp, Isabelle; Rape, Michael | Cell | 18485873 | 2008 May 16 |
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| Developmental origins of disease and determinants of chromatin structure: maternal diet modifies the primate fetal epigenome. | Aagaard-Tillery, Kjersti M; Grove, Kevin; Bishop, Jacalyn; Ke, Xingrao; Fu, Qi; McKnight, Robert; Lane, Robert H | Journal of molecular endocrinology | 18515302 | 2008 Aug |
| Mycolic acid modification by the mmaA4 gene of M. tuberculosis modulates IL-12 production. | Dao, Dee N; Sweeney, Kari; Hsu, Tsungda; Gurcha, Sudagar S; Nascimento, Ivan P; Roshevsky, Dan; Besra, Gurdyal S; Chan, John; Porcelli, Steven A; Jacobs, William R | PLoS pathogens. | 18535659 | 2008 Jun; |
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| Both daughter cells traffic and exocytose membrane at the cleavage furrow during mammalian cytokinesis. | Goss, John W; Toomre, Derek K | The Journal of cell biology | 18573914 | 2008 Jun 30 |
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| A developmental taxonomy of glioblastoma defined and maintained by MicroRNAs. | Kim, Tae-Min; Huang, Wei; Park, Richard; Park, Peter J; Johnson, Mark D | Cancer research | 21385897 | 2011 May 1 |
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| A novel nanoparticle-enhanced photoacoustic stimulus for bone tissue engineering. | Sitharaman, Balaji; Avti, Pramod K; Schaefer, Kenneth; Talukdar, Yahfi; Longtin, Jon P | Tissue engineering. Part A | 21395444 | 2011 Jul |
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| Apoptotic regulation of epithelial cellular extrusion. | Andrade, Daniel; Rosenblatt, Jody | Apoptosis : an international journal on programmed cell death | 21399977 | 2011 May |
| Loss of sarcolemmal nNOS is common in acquired and inherited neuromuscular disorders. | Finanger Hedderick, E L; Simmers, J L; Soleimani, A; Andres-Mateos, E; Marx, R; Files, D C; King, L; Crawford, T O; Corse, A M; Cohn, R D | Neurology | 21403107 | 2011 Mar 15 |
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| Robust amyloid clearance in a mouse model of Alzheimer's disease provides novel insights into the mechanism of amyloid-beta immunotherapy. | Wang, Allan; Das, Pritam; Switzer 3rd, Robert C; Golde, Todd E; Jankowsky, Joanna L | The Journal of neuroscience : the official journal of the Society for Neuroscience | 21411653 | 2011 Mar 16 |
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| Progress in understanding reprogramming to the induced pluripotent state. | Plath, Kathrin; Lowry, William E | Nature reviews. Genetics | 21415849 | 2011 Apr |
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| Carbon nanotube monolayer cues for osteogenesis of mesenchymal stem cells. | Baik, Ku Youn; Park, Sung Young; Heo, Kwang; Lee, Ki-Bum; Hong, Seunghun | Small (Weinheim an der Bergstrasse, Germany). | 21425459 | 2011 Mar 21; |
| A rapid fluorescence-based assay for classification of iNKT cell activating glycolipids. | Arora, Pooja; Venkataswamy, Manjunatha M; Baena, Andres; Bricard, Gabriel; Li, Qian; Veerapen, Natacha; Ndonye, Rachel; Park, Jeong Ju; Lee, Ji Hyung; Seo, Kyung-Chang; Howell, Amy R; Chang, Young-Tae; Illarionov, Petr A; Besra, Gurdyal S; Chung, Sung-Kee | Journal of the American Chemical Society. | 21425779 | 2011 Apr 13; |
| Monoalkylglycerol ether lipids promote adipogenesis. | Homan, Edwin A; Kim, Yun-Gon; Cardia, James P; Saghatelian, Alan | Journal of the American Chemical Society. | 21428285 | 2011 Apr 13; |
| Thiazole/oxazole-modified microcins: complex natural products from ribosomal templates. | Melby, Joel O; Nard, Nathan J; Mitchell, Douglas A | Current opinion in chemical biology | 21429787 | 2011 Jun |
| Sex-specific cognitive deficits and regional brain volume loss in mice exposed to chronic, sublethal hypoxia. | Lan, Wen-Chun J; Priestley, Matthew; Mayoral, Sonia R; Tian, Lu; Shamloo, Mehrdad; Penn, Anna A | Pediatric research | 21436761 | 2011 Jul |
| DNA-encoding to improve performance and allow parallel evaluation of the binding characteristics of multiple antibodies in a surface-bound immunoassay format. | Washburn, Adam L; Gomez, Joseph; Bailey, Ryan C | Analytical chemistry | 21438633 | 2011 May 1 |
| Microbial colonization induces dynamic temporal and spatial patterns of NF-ýýB activation in the zebrafish digestive tract. | Kanther, Michelle; Sun, Xiaolun; Muhlbauer, Marcus; Mackey, Lantz C; Flynn 3rd, Edward J; Bagnat, Michel; Jobin, Christian; Rawls, John F | Gastroenterology | 21439961 | 2011 Jul |
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| Measuring Caenorhabditis elegans life span in 96 well microtiter plates. | Solis, Gregory M; Petrascheck, Michael | Journal of visualized experiments : JoVE. | 21445049 | 2011; |
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| Thickness dependence of the MoO(3) blocking layers on ZnO nanorod-inverted organic photovoltaic devices. | Wang, Mingjun; Li, Yuan; Huang, Huihui; Peterson, Eric D; Nie, Wanyi; Zhou, Wei; Zeng, Wei; Huang, Wenxiao; Fang, Guojia; Sun, Nanhai; Zhao, Xingzhong; Carroll, David L | Applied physics letters. | 21464889 | 2011 Mar 07; |
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| PolyQ repeat expansions in ATXN2 associated with ALS are CAA interrupted repeats. | Yu, Zhenming; Zhu, Yongqing; Chen-Plotkin, Alice S; Clay-Falcone, Dana; McCluskey, Leo; Elman, Lauren; Kalb, Robert G; Trojanowski, John Q; Lee, Virginia M-Y; Van Deerlin, Vivianna M; Gitler, Aaron D; Bonini, Nancy M | PloS one | 21479228 | 2011 |
| A single-layer, planar, optofluidic Mach-Zehnder interferometer for label-free detection. | Lapsley, Michael Ian; Chiang, I-Kao; Zheng, Yue Bing; Ding, Xiaoyun; Mao, Xiaole; Huang, Tony Jun | Lab on a chip | 21479332 | 2011 May 21 |
| Obstructive sleep apnea screening in pregnancy, perinatal outcomes, and impact of maternal obesity. | Olivarez, Sofia A; Ferres, Millie; Antony, Katherine; Mattewal, Amarbir; Maheshwari, Bani; Sangi-Haghpeykar, Haleh; Aagaard-Tillery, Kjersti | American journal of perinatology. | 21480159 | 2011 Sep; |
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| Expanding cofactor repertoire of protein lysine methyltransferase for substrate labeling. | Islam, Kabirul; Zheng, Weihong; Yu, Haiqiang; Deng, Haiteng; Luo, Minkui | ACS chemical biology | 21495674 | 2011 Jul 15 |
| Biocompatible and pH-sensitive PLGA encapsulated MnO nanocrystals for molecular and cellular MRI. | Bennewitz, Margaret F; Lobo, Tricia L; Nkansah, Michael K; Ulas, Gozde; Brudvig, Gary W; Shapiro, Erik M | ACS nano | 21495676 | 2011 May 24 |
| Aldehyde dehydrogenase in combination with CD133 defines angiogenic ovarian cancer stem cells that portend poor patient survival. | Silva, Ines A; Bai, Shoumei; McLean, Karen; Yang, Kun; Griffith, Kent; Thomas, Dafydd; Ginestier, Christophe; Johnston, Carolyn; Kueck, Angela; Reynolds, R Kevin; Wicha, Max S; Buckanovich, Ronald J | Cancer research | 21498635 | 2011 Jun 1 |
| Mechanisms for maintaining cell shape in rod-shaped Gram-negative bacteria. | Furchtgott, Leon; Wingreen, Ned S; Huang, Kerwyn Casey | Molecular microbiology | 21501250 | 2011 Jul |
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| High-efficiency channelrhodopsins for fast neuronal stimulation at low light levels. | Berndt, André; Schoenenberger, Philipp; Mattis, Joanna; Tye, Kay M; Deisseroth, Karl; Hegemann, Peter; Oertner, Thomas G | Proceedings of the National Academy of Sciences of the United States of America. | 21504945 | 2011 May 03; |
| The expanding horizons of asparagine-linked glycosylation. | Larkin, Angelyn; Imperiali, Barbara | Biochemistry. | 21506607 | 2011 May 31; |
| Capturing the herpes simplex virus core fusion complex (gB-gH/gL) in an acidic environment. | Cairns, Tina M; Whitbeck, J Charles; Lou, Huan; Heldwein, Ekaterina E; Chowdary, Tirumala K; Eisenberg, Roselyn J; Cohen, Gary H | Journal of virology | 21507973 | 2011 Jul |
| Modelling the performance of isoniazid preventive therapy for reducing tuberculosis in HIV endemic settings: the effects of network structure. | Mills, H L; Cohen, T; Colijn, C | Journal of the Royal Society, Interface / the Royal Society | 21508012 | 2011 Oct 7 |
| A yeast model for polyalanine-expansion aggregation and toxicity. | Konopka, Catherine A; Locke, Melissa N; Gallagher, Pamela S; Pham, Ngan; Hart, Michael P; Walker, Claire J; Gitler, Aaron D; Gardner, Richard G | Molecular biology of the cell | 21508314 | 2011 Jun 15 |
| Recent progress in SERS biosensing. | Bantz, Kyle C; Meyer, Audrey F; Wittenberg, Nathan J; Im, Hyungsoon; Kurtulus, Ozge; Lee, Si Hoon; Lindquist, Nathan C; Oh, Sang-Hyun; Haynes, Christy L | Physical chemistry chemical physics : PCCP | 21509385 | 2011 Jun 28 |
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| Models to understand the population-level impact of mixed strain M. tuberculosis infections. | Sergeev, Rinat; Colijn, Caroline; Cohen, Ted | Journal of theoretical biology | 21514304 | 2011 Jul 7 |
| Use of whole genome sequencing to estimate the mutation rate of Mycobacterium tuberculosis during latent infection. | Ford, Christopher B; Lin, Philana Ling; Chase, Michael R; Shah, Rupal R; Iartchouk, Oleg; Galagan, James; Mohaideen, Nilofar; Ioerger, Thomas R; Sacchettini, James C; Lipsitch, Marc; Flynn, JoAnne L; Fortune, Sarah M | Nature genetics | 21516081 | 2011 May |
| Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells. | Rabani, Michal; Levin, Joshua Z; Fan, Lin; Adiconis, Xian; Raychowdhury, Raktima; Garber, Manuel; Gnirke, Andreas; Nusbaum, Chad; Hacohen, Nir; Friedman, Nir; Amit, Ido; Regev, Aviv | Nature biotechnology | 21516085 | 2011 May |
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| Ribosome-mediated specificity in Hox mRNA translation and vertebrate tissue patterning. | Kondrashov, Nadya; Pusic, Aya; Stumpf, Craig R; Shimizu, Kunihiko; Hsieh, Andrew C; Xue, Shifeng; Ishijima, Junko; Shiroishi, Toshihiko; Barna, Maria | Cell. | 21529712 | 2011 Apr 29; |
| An epigenetic signature for monoallelic olfactory receptor expression. | Magklara, Angeliki; Yen, Angela; Colquitt, Bradley M; Clowney, E Josephine; Allen, William; Markenscoff-Papadimitriou, Eirene; Evans, Zoe A; Kheradpour, Pouya; Mountoufaris, George; Carey, Catriona; Barnea, Gilad; Kellis, Manolis; Lomvardas, Stavros | Cell | 21529909 | 2011 May 13 |
| Blocking lymphocyte localization to the gastrointestinal mucosa as a therapeutic strategy for inflammatory bowel diseases. | Villablanca, Eduardo J; Cassani, Barbara; von Andrian, Ulrich H; Mora, J Rodrigo | Gastroenterology | 21530744 | 2011 May |
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| Labeling substrates of protein arginine methyltransferase with engineered enzymes and matched S-adenosyl-L-methionine analogues. | Wang, Rui; Zheng, Weihong; Yu, Haiqiang; Deng, Haiteng; Luo, Minkui | Journal of the American Chemical Society | 21539310 | 2011 May 25 |
| Harnessing the potential of induced pluripotent stem cells for regenerative medicine. | Wu, Sean M; Hochedlinger, Konrad | Nature cell biology | 21540845 | 2011 May |
| Molecular determinants and genetic modifiers of aggregation and toxicity for the ALS disease protein FUS/TLS. | Sun, Zhihui; Diaz, Zamia; Fang, Xiaodong; Hart, Michael P; Chesi, Alessandra; Shorter, James; Gitler, Aaron D | PLoS biology | 21541367 | 2011 Apr |
| Sensitive on-chip detection of a protein biomarker in human serum and plasma over an extended dynamic range using silicon photonic microring resonators and sub-micron beads. | Luchansky, Matthew S; Washburn, Adam L; McClellan, Melinda S; Bailey, Ryan C | Lab on a chip | 21541438 | 2011 Jun 21 |
| Biochemical characterization of the O-linked glycosylation pathway in Neisseria gonorrhoeae responsible for biosynthesis of protein glycans containing N,N'-diacetylbacillosamine. | Hartley, Meredith D; Morrison, Michael J; Aas, Finn Erik; Borud, Bente; Koomey, Michael; Imperiali, Barbara | Biochemistry. | 21542610 | 2011 Jun 7; |
| Stereochemical basis for engineered pyrrolysyl-tRNA synthetase and the efficient in vivo incorporation of structurally divergent non-native amino acids. | Takimoto, Jeffrey K; Dellas, Nikki; Noel, Joseph P; Wang, Lei | ACS chemical biology | 21545173 | 2011 Jul 15 |
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| Top-gated chemical vapor deposition grown graphene transistors with current saturation. | Bai, Jingwei; Liao, Lei; Zhou, Hailong; Cheng, Rui; Liu, Lixin; Huang, Yu; Duan, Xiangfeng | Nano letters | 21548551 | 2011 Jun 8 |
| Dual-mode of insulin action controls GLUT4 vesicle exocytosis. | Xu, Yingke; Rubin, Bradley R; Orme, Charisse M; Karpikov, Alexander; Yu, Chenfei; Bogan, Jonathan S; Toomre, Derek K | The Journal of cell biology | 21555461 | 2011 May 16 |
| Epithelial cell extrusion requires the sphingosine-1-phosphate receptor 2 pathway. | Gu, Yapeng; Forostyan, Tetyana; Sabbadini, Roger; Rosenblatt, Jody | The Journal of cell biology | 21555463 | 2011 May 16 |
| Tracking brain states under general anesthesia by using global coherence analysis. | Cimenser, Aylin; Purdon, Patrick L; Pierce, Eric T; Walsh, John L; Salazar-Gomez, Andres F; Harrell, Priscilla G; Tavares-Stoeckel, Casie; Habeeb, Kathleen; Brown, Emery N | Proceedings of the National Academy of Sciences of the United States of America | 21555565 | 2011 May 24 |
| Graphite-coated magnetic nanoparticles as multimodal imaging probes and cooperative therapeutic agents for tumor cells. | Park, Joung Kyu; Jung, Jongjin; Subramaniam, Prasad; Shah, Birju P; Kim, Cheoljin; Lee, Jong Kyo; Cho, Jee-Hyun; Lee, Chulhyun; Lee, Ki-Bum | Small (Weinheim an der Bergstrasse, Germany). | 21560243 | 2011 Jun 20; |
| Losartan restores skeletal muscle remodeling and protects against disuse atrophy in sarcopenia. | Burks, Tyesha N; Andres-Mateos, Eva; Marx, Ruth; Mejias, Rebeca; Van Erp, Christel; Simmers, Jessica L; Walston, Jeremy D; Ward, Christopher W; Cohn, Ronald D | Science translational medicine | 21562229 | 2011 May 11 |
| Evaluating the prevalence of polyglutamine repeat expansions in amyotrophic lateral sclerosis. | Lee, T; Li, Y R; Chesi, A; Hart, M P; Ramos, D; Jethava, N; Hosangadi, D; Epstein, J; Hodges, B; Bonini, N M; Gitler, A D | Neurology | 21562248 | 2011 Jun 14 |
| Polarization-controlled differentiation of human neural stem cells using synergistic cues from the patterns of carbon nanotube monolayer coating. | Park, Sung Young; Choi, Dong Shin; Jin, Hye Jun; Park, Juhun; Byun, Kyung-Eun; Lee, Ki-Bum; Hong, Seunghun | ACS nano | 21568294 | 2011 Jun 28 |
| Serial monitoring of endogenous neuroblast migration by cellular MRI. | Granot, Dorit; Scheinost, Dustin; Markakis, Eleni A; Papademetris, Xenios; Shapiro, Erik M | NeuroImage | 21571076 | 2011 Aug 1 |
| Field-portable lensfree tomographic microscope. | Isikman, Serhan O; Bishara, Waheb; Sikora, Uzair; Yaglidere, Oguzhan; Yeah, John; Ozcan, Aydogan | Lab on a chip | 21573311 | 2011 Jul 7 |
| Microscale mechanisms of agarose-induced disruption of collagen remodeling. | Ulrich, Theresa A; Lee, Tae Geol; Shon, Hyun Kyong; Moon, Dae Won; Kumar, Sanjay | Biomaterials | 21575987 | 2011 Aug |
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| Constructing de novo biosynthetic pathways for chemical synthesis inside living cells. | Weeks, Amy M; Chang, Michelle C Y | Biochemistry. | 21591680 | 2011 Jun 21; |
| pH-Operated mechanized porous silicon nanoparticles. | Xue, Min; Zhong, Xing; Shaposhnik, Zory; Qu, Yongquan; Tamanoi, Fuyuhiko; Duan, Xiangfeng; Zink, Jeffrey I | Journal of the American Chemical Society | 21595466 | 2011 Jun 15 |
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| Nanospheres delivering the EGFR TKI AG1478 promote optic nerve regeneration: the role of size for intraocular drug delivery. | Robinson, Rebecca; Viviano, Stephen R; Criscione, Jason M; Williams, Cicely A; Jun, Lin; Tsai, James C; Lavik, Erin B | ACS nano | 21619059 | 2011 Jun 28 |
| Small RNAs loom large during reprogramming. | Sridharan, Rupa; Plath, Kathrin | Cell stem cell | 21624799 | 2011 Jun 3 |
| Heterointegration of Pt/Si/Ag Nanowire Photodiodes and Their Photocatalytic Properties. | Qu, Yongquan; Xue, Teng; Zhong, Xing; Lin, Yung-Chen; Liao, Lei; Choi, Jina; Duan, Xiangfeng | Advanced functional materials | 21629399 | 2010 Sep 23 |
| Adaptive immune defects against glycoantigens in chronic granulomatous disease via dysregulated nitric oxide production. | Lewis, Colleen J; Cobb, Brian A | European journal of immunology | 21630251 | 2011 Sep |
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| Lensfree on-chip holography facilitates novel microscopy applications. | Ozcan, Aydogan; Isikman, Serhan; Mudanyali, Onur; Tseng, Derek; Sencan, Ikbal | SPIE newsroom. | 21643449 | 2010 May 19; |
| All-Optical Modulation of Localized Surface Plasmon Coupling in a Hybrid System Composed of Photo-Switchable Gratings and Au Nanodisk Arrays. | Liu, Yan Jun; Zheng, Yue Bing; Liou, Justin; Chiang, I-Kao; Khoo, Iam Choon; Huang, Tony Jun | The journal of physical chemistry. C, Nanomaterials and interfaces | 21643480 | 2011 Apr 21 |
| Interleukin-1ýý (IL-1ýý) promotes susceptibility of Toll-like receptor 5 (TLR5) deficient mice to colitis. | Carvalho, Frederic A; Nalbantoglu, Ilke; Ortega-Fernandez, Sophie; Aitken, Jesse D; Su, Yueju; Koren, Omry; Walters, William A; Knight, Rob; Ley, Ruth E; Vijay-Kumar, Matam; Gewirtz, Andrew T | Gut | 21646247 | 2012 Mar |
| MyD88-dependent TLR1/2 signals educate dendritic cells with gut-specific imprinting properties. | Wang, Sen; Villablanca, Eduardo J; De Calisto, Jaime; Gomes, Daniel C O; Nguyen, Deanna D; Mizoguchi, Emiko; Kagan, Jonathan C; Reinecker, Hans-Christian; Hacohen, Nir; Nagler, Cathryn; Xavier, Ramnik J; Rossi-Bergmann, Bartira; Chen, Yi-Bin; Blomhoff, Ru | Journal of immunology (Baltimore, Md. : 1950) | 21646294 | 2011 Jul 1 |
| Dissecting the oncogenic and tumorigenic potential of differentiated human induced pluripotent stem cells and human embryonic stem cells. | Ghosh, Zhumur; Huang, Mei; Hu, Shijun; Wilson, Kitchener D; Dey, Devaveena; Wu, Joseph C | Cancer research | 21646469 | 2011 Jul 15 |
| Scalable fabrication of self-aligned graphene transistors and circuits on glass. | Liao, Lei; Bai, Jingwei; Cheng, Rui; Zhou, Hailong; Liu, Lixin; Liu, Yuan; Huang, Yu; Duan, Xiangfeng | Nano letters | 21648419 | 2012 Jun 13 |
| FGF signaling regulates the number of posterior taste papillae by controlling progenitor field size. | Petersen, Camille I; Jheon, Andrew H; Mostowfi, Pasha; Charles, Cyril; Ching, Saunders; Thirumangalathu, Shoba; Barlow, Linda A; Klein, Ophir D | PLoS genetics | 21655085 | 2011 Jun |
| Model organisms reveal insight into human neurodegenerative disease: ataxin-2 intermediate-length polyglutamine expansions are a risk factor for ALS. | Bonini, Nancy M; Gitler, Aaron D | Journal of molecular neuroscience : MN | 21660502 | 2011 Nov |
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| antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences. | Medema, Marnix H; Blin, Kai; Cimermancic, Peter; de Jager, Victor; Zakrzewski, Piotr; Fischbach, Michael A; Weber, Tilmann; Takano, Eriko; Breitling, Rainer | Nucleic acids research | 21672958 | 2011 Jul |
| Genetically encoding unnatural amino acids in neural stem cells and optically reporting voltage-sensitive domain changes in differentiated neurons. | Shen, Bin; Xiang, Zheng; Miller, Barbara; Louie, Gordon; Wang, Wenyuan; Noel, Joseph P; Gage, Fred H; Wang, Lei | Stem cells (Dayton, Ohio) | 21681861 | 2011 Aug |
| Paternal drinking, intimate relationship quality, and alcohol consumption in pregnant Ukrainian women. | Bakhireva, Ludmila N; Wilsnack, Sharon C; Kristjanson, Arlinda; Yevtushok, Lyubov; Onishenko, Svetlana; Wertelecki, Wladimir; Chambers, Christina D | Journal of studies on alcohol and drugs. | 21683035 | 2011 Jul; |
| Inflammation responsive logic gate nanoparticles for the delivery of proteins. | Mahmoud, Enas A; Sankaranarayanan, Jagadis; Morachis, Jose M; Kim, Gloria; Almutairi, Adah | Bioconjugate chemistry | 21688843 | 2011 Jul 20 |
| Detection and avoidance of a carnivore odor by prey. | Ferrero, David M; Lemon, Jamie K; Fluegge, Daniela; Pashkovski, Stan L; Korzan, Wayne J; Datta, Sandeep Robert; Spehr, Marc; Fendt, Markus; Liberles, Stephen D | Proceedings of the National Academy of Sciences of the United States of America | 21690383 | 2011 Jul 5 |
| Peroxisome proliferator-activated receptor-? agonists prevent in vivo remodeling of human artery induced by alloreactive T cells. | Tobiasova, Zuzana; Zhang, Lufeng; Yi, Tai; Qin, Linfeng; Manes, Thomas D; Kulkarni, Sanjay; Lorber, Marc I; Rodriguez, Frederick C; Choi, Je-Min; Tellides, George; Pober, Jordan S; Kawikova, Ivana; Bothwell, Alfred L M | Circulation. | 21690493 | 2011 Jul 12; |
| Scalable manufacturing of plasmonic nanodisk dimers and cusp nanostructures using salting-out quenching method and colloidal lithography. | Juluri, Bala Krishna; Chaturvedi, Neetu; Hao, Qingzhen; Lu, Mengqian; Velegol, Darrell; Jensen, Lasse; Huang, Tony Jun | ACS nano | 21692473 | 2011 Jul 26 |
| A substrate-free activity-based protein profiling screen for the discovery of selective PREPL inhibitors. | Lone, Anna Mari; Bachovchin, Daniel A; Westwood, David B; Speers, Anna E; Spicer, Timothy P; Fernandez-Vega, Virneliz; Chase, Peter; Hodder, Peter S; Rosen, Hugh; Cravatt, Benjamin F; Saghatelian, Alan | Journal of the American Chemical Society | 21692504 | 2011 Aug 3 |
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| Towards an evolutionary model of transcription networks. | Xie, Dan; Chen, Chieh-Chun; He, Xin; Cao, Xiaoyi; Zhong, Sheng | PLoS computational biology | 21695281 | 2011 Jun |
| Patient-to-patient variability in autologous pericardial matrix scaffolds for cardiac repair. | Seif-Naraghi, Sonya B; Horn, Dinah; Schup-Magoffin, Pam A; Madani, Michael M; Christman, Karen L | Journal of cardiovascular translational research | 21695575 | 2011 Oct |
| Wet nanoscale imaging and testing of polymersomes. | Battaglia, Giuseppe; LoPresti, Caterina; Massignani, Marzia; Warren, Nicholas J; Madsen, Jeppe; Forster, Simon; Vasilev, Cvetilin; Hobbs, Jamie K; Armes, Steven P; Chirasatitsin, Somoyot; Engler, Adam J | Small (Weinheim an der Bergstrasse, Germany) | 21695783 | 2011 Jul 18 |
| Striatal origin of the pathologic beta oscillations in Parkinson's disease. | McCarthy, M M; Moore-Kochlacs, C; Gu, X; Boyden, E S; Han, X; Kopell, N | Proceedings of the National Academy of Sciences of the United States of America | 21697509 | 2011 Jul 12 |
| Interaction of poly(ethylenimine)-DNA polyplexes with mitochondria: implications for a mechanism of cytotoxicity. | Grandinetti, Giovanna; Ingle, Nilesh P; Reineke, Theresa M | Molecular pharmaceutics | 21699201 | 2011 Oct 3 |
| Regulation of ubiquitin chain initiation to control the timing of substrate degradation. | Williamson, Adam; Banerjee, Sudeep; Zhu, Xining; Philipp, Isabelle; Iavarone, Anthony T; Rape, Michael | Molecular cell | 21700221 | 2011 Jun 24 |
| A wirelessly powered and controlled device for optical neural control of freely-behaving animals. | Wentz, Christian T; Bernstein, Jacob G; Monahan, Patrick; Guerra, Alexander; Rodriguez, Alex; Boyden, Edward S | Journal of neural engineering | 21701058 | 2011 Aug |
| High-throughput mapping of the promoters of the mouse olfactory receptor genes reveals a new type of mammalian promoter and provides insight into olfactory receptor gene regulation. | Clowney, E Josephine; Magklara, Angeliki; Colquitt, Bradley M; Pathak, Nidhi; Lane, Robert P; Lomvardas, Stavros | Genome research | 21705439 | 2011 Aug |
| Combined reflection and transmission microscope for telemedicine applications in field settings. | Biener, Gabriel; Greenbaum, Alon; Isikman, Serhan O; Lee, Kelvin; Tseng, Derek; Ozcan, Aydogan | Lab on a chip | 21709875 | 2011 Aug 21 |
| Three-dimensional continuous particle focusing in a microfluidic channel via standing surface acoustic waves (SSAW). | Shi, Jinjie; Yazdi, Shahrzad; Lin, Sz-Chin Steven; Ding, Xiaoyun; Chiang, I-Kao; Sharp, Kendra; Huang, Tony Jun | Lab on a chip | 21709881 | 2011 Jul 21 |
| Anti-DNA:RNA antibodies and silicon photonic microring resonators: increased sensitivity for multiplexed microRNA detection. | Qavi, Abraham J; Kindt, Jared T; Gleeson, Martin A; Bailey, Ryan C | Analytical chemistry | 21711056 | 2011 Aug 1 |
| Excitatory transmission from the amygdala to nucleus accumbens facilitates reward seeking. | Stuber, Garret D; Sparta, Dennis R; Stamatakis, Alice M; van Leeuwen, Wieke A; Hardjoprajitno, Juanita E; Cho, Saemi; Tye, Kay M; Kempadoo, Kimberly A; Zhang, Feng; Deisseroth, Karl; Bonci, Antonello | Nature. | 21716290 | 2011 Jun 29; |
| Molecular detection of bacterial pathogens using microparticle enhanced double-stranded DNA probes. | Riahi, Reza; Mach, Kathleen E; Mohan, Ruchika; Liao, Joseph C; Wong, Pak Kin | Analytical chemistry | 21718053 | 2011 Aug 15 |
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| Increased infarct wall thickness by a bio-inert material is insufficient to prevent negative left ventricular remodeling after myocardial infarction. | Rane, Aboli A; Chuang, Joyce S; Shah, Amul; Hu, Diane P; Dalton, Nancy D; Gu, Yusu; Peterson, Kirk L; Omens, Jeffrey H; Christman, Karen L | PloS one | 21731777 | 2011 |
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| Discovery of 1,2,4-thiadiazolidine-3,5-dione analogs that exhibit unusual and selective rapid cell death kinetics against acute myelogenous leukemia cells in culture. | Nasim, Shama; Guzman, Monica L; Jordan, Craig T; Crooks, Peter A | Bioorganic & medicinal chemistry letters | 21757349 | 2011 Aug 15 |
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| A new evolutionary and pharmacokinetic-pharmacodynamic scenario for rapid emergence of resistance to single and multiple anti-tuberculosis drugs. | Pasipanodya, Jotam G; Gumbo, Tawanda | Current opinion in pharmacology | 21807559 | 2011 Oct |
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| The architecture of CopA from Archeaoglobus fulgidus studied by cryo-electron microscopy and computational docking. | Allen, Gregory S; Wu, Chen-Chou; Cardozo, Tim; Stokes, David L | Structure (London, England : 1993) | 21820315 | 2011 Sep 7 |
| Elucidating the mechanobiology of malignant brain tumors using a brain matrix-mimetic hyaluronic acid hydrogel platform. | Ananthanarayanan, Badriprasad; Kim, Yushan; Kumar, Sanjay | Biomaterials | 21820737 | 2011 Nov |
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| RNA-binding proteins with prion-like domains in ALS and FTLD-U. | Gitler, Aaron D; Shorter, James | Prion | 21847013 | 2011 Jul-Sep |
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| Human defensin 5 disulfide array mutants: disulfide bond deletion attenuates antibacterial activity against Staphylococcus aureus. | Wanniarachchi, Yoshitha A; Kaczmarek, Piotr; Wan, Andrea; Nolan, Elizabeth M | Biochemistry | 21861459 | 2011 Sep 20 |
| Molecular-level engineering of protein physical hydrogels for predictive sol-gel phase behavior. | Mulyasasmita, Widya; Lee, Ji Seok; Heilshorn, Sarah C | Biomacromolecules | 21861461 | 2011 Oct 10 |
| Regulation of tooth number by fine-tuning levels of receptor-tyrosine kinase signaling. | Charles, Cyril; Hovorakova, Maria; Ahn, Youngwook; Lyons, David B; Marangoni, Pauline; Churava, Svatava; Biehs, Brian; Jheon, Andrew; Lesot, Herve; Balooch, Guive; Krumlauf, Robb; Viriot, Laurent; Peterkova, Renata; Klein, Ophir D | Development (Cambridge, England) | 21862563 | 2011 Sep |
| The emergence of sarcomeric, graded-polarity and spindle-like patterns in bundles of short cytoskeletal polymers and two opposite molecular motors. | Craig, E M; Dey, S; Mogilner, A | Journal of physics. Condensed matter : an Institute of Physics journal. | 21862843 | 2011 Sep 21; |
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| Porous silicon nanowires. | Qu, Yongquan; Zhou, Hailong; Duan, Xiangfeng | Nanoscale | 21869999 | 2011 Oct 5 |
| Intersection of FOXO- and RUNX1-mediated gene expression programs in single breast epithelial cells during morphogenesis and tumor progression. | Wang, Lixin; Brugge, Joan S; Janes, Kevin A | Proceedings of the National Academy of Sciences of the United States of America | 21873240 | 2011 Oct 4 |
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| The modulation of Amyotrophic Lateral Sclerosis risk by ataxin-2 intermediate polyglutamine expansions is a specific effect. | Gispert, Suzana; Kurz, Alexander; Waibel, Stefan; Bauer, Peter; Liepelt, Inga; Geisen, Christof; Gitler, Aaron D; Becker, Tim; Weber, Markus; Berg, Daniela; Andersen, Peter M; Kruger, Rejko; Riess, Olaf; Ludolph, Albert C; Auburger, Georg | Neurobiology of disease | 21889984 | 2012 Jan |
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| Site-specific recombinase strategy to create induced pluripotent stem cells efficiently with plasmid DNA. | Karow, Marisa; Chavez, Christopher L; Farruggio, Alfonso P; Geisinger, Jonathan M; Keravala, Annahita; Jung, W Edward; Lan, Feng; Wu, Joseph C; Chen-Tsai, Yanru; Calos, Michele P | Stem cells (Dayton, Ohio) | 21898697 | 2011 Nov |
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| High-throughput detection of actionable genomic alterations in clinical tumor samples by targeted, massively parallel sequencing. | Wagle, Nikhil; Berger, Michael F; Davis, Matthew J; Blumenstiel, Brendan; Defelice, Matthew; Pochanard, Panisa; Ducar, Matthew; Van Hummelen, Paul; Macconaill, Laura E; Hahn, William C; Meyerson, Matthew; Gabriel, Stacey B; Garraway, Levi A | Cancer discovery | 22585170 | 2012 Jan |
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| Nanofabrication using near-field optical probes. | McLeod, Euan; Ozcan, Aydogan | Journal of laboratory automation | 22713756 | 2012 Aug |
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| On-chip manipulation of single microparticles, cells, and organisms using surface acoustic waves. | Ding, Xiaoyun; Lin, Sz-Chin Steven; Kiraly, Brian; Yue, Hongjun; Li, Sixing; Chiang, I-Kao; Shi, Jinjie; Benkovic, Stephen J; Huang, Tony Jun | Proceedings of the National Academy of Sciences of the United States of America | 22733731 | 2012 Jul 10 |
| Deep-tissue focal fluorescence imaging with digitally time-reversed ultrasound-encoded light. | Wang, Ying Min; Judkewitz, Benjamin; Dimarzio, Charles A; Yang, Changhuei | Nature communications | 22735456 | 2012 |
| Linking the transcriptional profiles and the physiological states of Mycobacterium tuberculosis during an extended intracellular infection. | Rohde, Kyle H; Veiga, Diogo F T; Caldwell, Shannon; Balazsi, Gabor; Russell, David G | PLoS pathogens | 22737072 | 2012 |
| DCAP: a broad-spectrum antibiotic that targets the cytoplasmic membrane of bacteria. | Eun, Ye-Jin; Foss, Marie H; Kiekebusch, Daniela; Pauw, Daniel A; Westler, William M; Thanbichler, Martin; Weibel, Douglas B | Journal of the American Chemical Society | 22741745 | 2012 Jul 18 |
| Characterization of dental epithelial stem cells from the mouse incisor with two-dimensional and three-dimensional platforms. | Chavez, Miquella G; Yu, Wenli; Biehs, Brian; Harada, Hidemitsu; Snead, Malcolm L; Lee, Janice S; Desai, Tejal A; Klein, Ophir D | Tissue engineering. Part C, Methods | 22742471 | 2013 Jan |
| Generation of a library of non-toxic quantum dots for cellular imaging and siRNA delivery. | Subramaniam, Prasad; Lee, Seung Jae; Shah, Shreyas; Patel, Sahishnu; Starovoytov, Valentin; Lee, Ki-Bum | Advanced materials (Deerfield Beach, Fla.) | 22744954 | 2012 Aug 2 |
| Role of phosphatidylinositol 4-phosphate (PI4P) and its binding protein GOLPH3 in hepatitis C virus secretion. | Bishe, Bryan; Syed, Gulam H; Field, Seth J; Siddiqui, Aleem | The Journal of biological chemistry | 22745132 | 2012 Aug 10 |
| White paper report of the 2011 RAD-AID Conference on International Radiology for Developing Countries: integrating multidisciplinary strategies for imaging services in the developing world. | Everton, Kathryn L; Mazal, Jonathan; Mollura, Daniel J; RAD-AID Conference Writing Group | Journal of the American College of Radiology : JACR. | 22748790 | 2012 Jul; |
| Injectable extracellular matrix derived hydrogel provides a platform for enhanced retention and delivery of a heparin-binding growth factor. | Seif-Naraghi, Sonya B; Horn, Dinah; Schup-Magoffin, Pamela J; Christman, Karen L | Acta biomaterialia | 22750737 | 2012 Oct |
| Activation of the AXL kinase causes resistance to EGFR-targeted therapy in lung cancer. | Zhang, Zhenfeng; Lee, Jae Cheol; Lin, Luping; Olivas, Victor; Au, Valerie; LaFramboise, Thomas; Abdel-Rahman, Mohamed; Wang, Xiaoqi; Levine, Alan D; Rho, Jin Kyung; Choi, Yun Jung; Choi, Chang-Min; Kim, Sang-We; Jang, Se Jin; Park, Young Soo; Kim, Woo Sun | Nature genetics. | 22751098 | 2012 Aug; |
| The antibiotic resistance arrow of time: efflux pump induction is a general first step in the evolution of mycobacterial drug resistance. | Schmalstieg, Aurelia M; Srivastava, Shashikant; Belkaya, Serkan; Deshpande, Devyani; Meek, Claudia; Leff, Richard; van Oers, Nicolai S C; Gumbo, Tawanda | Antimicrobial agents and chemotherapy | 22751536 | 2012 Sep |
| Defining the DNA uptake specificity of naturally competent Haemophilus influenzae cells. | Mell, Joshua Chang; Hall, Ira M; Redfield, Rosemary J | Nucleic acids research | 22753031 | 2012 Sep 1 |
| High-frequency self-aligned graphene transistors with transferred gate stacks. | Cheng, Rui; Bai, Jingwei; Liao, Lei; Zhou, Hailong; Chen, Yu; Liu, Lixin; Lin, Yung-Chen; Jiang, Shan; Huang, Yu; Duan, Xiangfeng | Proceedings of the National Academy of Sciences of the United States of America. | 22753503 | 2012 Jul 17; |
| Antibody-recruiting molecules: an emerging paradigm for engaging immune function in treating human disease. | McEnaney, Patrick J; Parker, Christopher G; Zhang, Andrew X; Spiegel, David A | ACS chemical biology | 22758917 | 2012 Jul 20 |
| Adjunctive TNF inhibition with standard treatment enhances bacterial clearance in a murine model of necrotic TB granulomas. | Skerry, Ciaran; Harper, Jamie; Klunk, Mariah; Bishai, William R; Jain, Sanjay K | PloS one | 22761866 | 2012 |
| Epigenetic effects of prenatal stress on 11ýý-hydroxysteroid dehydrogenase-2 in the placenta and fetal brain. | Jensen Pena, Catherine; Monk, Catherine; Champagne, Frances A | PloS one | 22761903 | 2012 |
| Poly-acetylated chromatin signatures are preferred epitopes for site-specific histone H4 acetyl antibodies. | Rothbart, Scott B; Lin, Shu; Britton, Laura-Mae; Krajewski, Krzysztof; Keogh, Michael-C; Garcia, Benjamin A; Strahl, Brian D | Scientific reports | 22761995 | 2012 |
| ALS-associated ataxin 2 polyQ expansions enhance stress-induced caspase 3 activation and increase TDP-43 pathological modifications. | Hart, Michael P; Gitler, Aaron D | The Journal of neuroscience : the official journal of the Society for Neuroscience | 22764223 | 2012 Jul 4 |
| Photodegradable macromers and hydrogels for live cell encapsulation and release. | Griffin, Donald R; Kasko, Andrea M | Journal of the American Chemical Society | 22765384 | 2012 Aug 8 |
| Temporal and fluoride control of secondary metabolism regulates cellular organofluorine biosynthesis. | Walker, Mark C; Wen, Miao; Weeks, Amy M; Chang, Michelle C Y | ACS chemical biology. | 22769062 | 2012 Sep 21; |
| An old drug for new ideas: metformin promotes adult neurogenesis and spatial memory formation. | Potts, Matthew B; Lim, Daniel A | Cell stem cell | 22770236 | 2012 Jul 6 |
| Nanoparticle surface charge mediates the cellular receptors used by protein-nanoparticle complexes. | Fleischer, Candace C; Payne, Christine K | The journal of physical chemistry. B | 22774860 | 2012 Aug 2 |
| Antibody nanoparticle dispersions formed with mixtures of crowding molecules retain activity and in vivo bioavailability. | Miller, Maria A; Khan, Tarik A; Kaczorowski, Kevin J; Wilson, Brian K; Dinin, Aileen K; Borwankar, Ameya U; Rodrigues, Miguel A; Truskett, Thomas M; Johnston, Keith P; Maynard, Jennifer A | Journal of pharmaceutical sciences | 22777686 | 2012 Oct |
| Surface acoustic wave (SAW) acoustophoresis: now and beyond. | Lin, Sz-Chin Steven; Mao, Xiaole; Huang, Tony Jun | Lab on a chip | 22781941 | 2012 Aug 21 |
| The role of scaffold microarchitecture in engineering endothelial cell immunomodulation. | Indolfi, Laura; Baker, Aaron B; Edelman, Elazer R | Biomaterials. | 22796162 | 2012 Oct; |
| Least median of squares filtering of locally optimal point matches for compressible flow image registration. | Castillo, Edward; Castillo, Richard; White, Benjamin; Rojo, Javier; Guerrero, Thomas | Physics in medicine and biology | 22797602 | 2012 Aug 7 |
| The alignment and fusion assembly of adipose-derived stem cells on mechanically patterned matrices. | Choi, Yu Suk; Vincent, Ludovic G; Lee, Andrew R; Kretchmer, Kyle C; Chirasatitsin, Somyot; Dobke, Marek K; Engler, Adam J | Biomaterials | 22800539 | 2012 Oct |
| Monitoring cotranslational protein folding in mammalian cells at codon resolution. | Han, Yan; David, Alexandre; Liu, Botao; Magadan, Javier G; Bennink, Jack R; Yewdell, Jonathan W; Qian, Shu-Bing | Proceedings of the National Academy of Sciences of the United States of America | 22802618 | 2012 Jul 31 |
| E-cadherin is under constitutive actomyosin-generated tension that is increased at cell-cell contacts upon externally applied stretch. | Borghi, Nicolas; Sorokina, Maria; Shcherbakova, Olga G; Weis, William I; Pruitt, Beth L; Nelson, W James; Dunn, Alexander R | Proceedings of the National Academy of Sciences of the United States of America | 22802638 | 2012 Jul 31 |
| The small protein MbiA interacts with MreB and modulates cell shape in Caulobacter crescentus. | Yakhnina, Anastasiya A; Gitai, Zemer | Molecular microbiology | 22804814 | 2012 Sep |
| Characterization of differential Toll-like receptor responses below the optical diffraction limit. | Aaron, Jesse S; Carson, Bryan D; Timlin, Jerilyn A | Small (Weinheim an der Bergstrasse, Germany) | 22807232 | 2012 Oct 8 |
| Role of MXD3 in proliferation of DAOY human medulloblastoma cells. | Barisone, Gustavo A; Ngo, Tin; Tran, Martin; Cortes, Daniel; Shahi, Mehdi H; Nguyen, Tuong-Vi; Perez-Lanza, Daniel; Matayasuwan, Wanna; Diaz, Elva | PloS one | 22808009 | 2012 |
| GAT: a graph-theoretical analysis toolbox for analyzing between-group differences in large-scale structural and functional brain networks. | Hosseini, S M Hadi; Hoeft, Fumiko; Kesler, Shelli R | PloS one | 22808240 | 2012 |
| Fluorophore and dye-assisted dispersion of carbon nanotubes in aqueous solution. | Koh, Byumseok; Kim, Gwangseong; Yoon, Hyung Ki; Park, Jong Bae; Kopelman, Raoul; Cheng, Wei | Langmuir : the ACS journal of surfaces and colloids | 22812904 | 2012 Aug 14 |
| Neutrophil chemotaxis within a competing gradient of chemoattractants. | Kim, Donghyuk; Haynes, Christy L | Analytical chemistry | 22816782 | 2012 Jul 17 |
| Pluripotent stem cell-derived pancreatic ?-cells: potential for regenerative medicine in diabetes. | Kao, Der-I; Chen, Shuibing | Regenerative medicine. | 22817630 | 2012 Jul; |
| A landscape of driver mutations in melanoma. | Hodis, Eran; Watson, Ian R; Kryukov, Gregory V; Arold, Stefan T; Imielinski, Marcin; Theurillat, Jean-Philippe; Nickerson, Elizabeth; Auclair, Daniel; Li, Liren; Place, Chelsea; Dicara, Daniel; Ramos, Alex H; Lawrence, Michael S; Cibulskis, Kristian; Siva | Cell | 22817889 | 2012 Jul 20 |
| Promoters recognized by forkhead proteins exist for individual 21U-RNAs. | Cecere, Germano; Zheng, Grace X Y; Mansisidor, Andres R; Klymko, Katherine E; Grishok, Alla | Molecular cell | 22819322 | 2012 Sep 14 |
| Sox2+ stem cells contribute to all epithelial lineages of the tooth via Sfrp5+ progenitors. | Juuri, Emma; Saito, Kan; Ahtiainen, Laura; Seidel, Kerstin; Tummers, Mark; Hochedlinger, Konrad; Klein, Ophir D; Thesleff, Irma; Michon, Frederic | Developmental cell | 22819339 | 2012 Aug 14 |
| Advances in targeted genome editing. | Perez-Pinera, Pablo; Ousterout, David G; Gersbach, Charles A | Current opinion in chemical biology | 22819644 | 2012 Aug |
| Altered resting state functional brain network topology in chemotherapy-treated breast cancer survivors. | Bruno, Jennifer; Hosseini, S M Hadi; Kesler, Shelli | Neurobiology of disease | 22820143 | 2012 Dec |
| Mycobacterial shuttle vectors designed for high-level protein expression in infected macrophages. | Eitson, Jennifer L; Medeiros, Jennifer J; Hoover, Ashley R; Srivastava, Shashikant; Roybal, Kole T; Ainsa, Jose A; Hansen, Eric J; Gumbo, Tawanda; van Oers, Nicolai S C | Applied and environmental microbiology | 22820329 | 2012 Oct |
| Microfluidic single-cell analysis shows that porcine induced pluripotent stem cell-derived endothelial cells improve myocardial function by paracrine activation. | Gu, Mingxia; Nguyen, Patricia K; Lee, Andrew S; Xu, Dan; Hu, Shijun; Plews, Jordan R; Han, Leng; Huber, Bruno C; Lee, Won Hee; Gong, Yongquan; de Almeida, Patricia E; Lyons, Jennifer; Ikeno, Fumi; Pacharinsak, Cholawat; Connolly, Andrew J; Gambhir, Sanjiv | Circulation research | 22821929 | 2012 Sep 14 |
| Flow directs surface-attached bacteria to twitch upstream. | Shen, Yi; Siryaporn, Albert; Lecuyer, Sigolene; Gitai, Zemer; Stone, Howard A | Biophysical journal | 22828341 | 2012 Jul 3 |
| YAHA: fast and flexible long-read alignment with optimal breakpoint detection. | Faust, Gregory G; Hall, Ira M | Bioinformatics (Oxford, England) | 22829624 | 2012 Oct 1 |
| Convergent functional genomic studies of ?-3 fatty acids in stress reactivity, bipolar disorder and alcoholism. | Le-Niculescu, H; Case, N J; Hulvershorn, L; Patel, S D; Bowker, D; Gupta, J; Bell, R; Edenberg, H J; Tsuang, M T; Kuczenski, R; Geyer, M A; Rodd, Z A; Niculescu, A B | Translational psychiatry. | 22832392 | 2011; |
| Convergent functional genomics of anxiety disorders: translational identification of genes, biomarkers, pathways and mechanisms. | Le-Niculescu, H; Balaraman, Y; Patel, S D; Ayalew, M; Gupta, J; Kuczenski, R; Shekhar, A; Schork, N; Geyer, M A; Niculescu, A B | Translational psychiatry | 22832404 | 2011 |
| Stem cell and biomaterials research in dental tissue engineering and regeneration. | Horst, Orapin V; Chavez, Miquella G; Jheon, Andrew H; Desai, Tejal; Klein, Ophir D | Dental clinics of North America | 22835534 | 2012 Jul |
| A multichannel dampened flow system for studies on shear stress-mediated mechanotransduction. | Voyvodic, Peter L; Min, Daniel; Baker, Aaron B | Lab on a chip | 22836694 | 2012 Sep 21 |
| Reprogramming the beat: kicking it up a notch. | Wu, Sean M; Milan, David J | Circulation | 22837161 | 2012 Aug 28 |
| Revisiting lab-on-a-chip technology for drug discovery. | Neu?i, Pavel; Giselbrecht, Stefan; Länge, Kerstin; Huang, Tony Jun; Manz, Andreas | Nature reviews. Drug discovery. | 22850786 | 2012 Aug; |
| Water-soluble poly(L-serine)s with elongated and charged side-chains: synthesis, conformations, and cell-penetrating properties. | Tang, Haoyu; Yin, Lichen; Lu, Hua; Cheng, Jianjun | Biomacromolecules | 22853191 | 2012 Sep 10 |
| Soft microenvironments promote the early neurogenic differentiation but not self-renewal of human pluripotent stem cells. | Keung, Albert J; Asuri, Prashanth; Kumar, Sanjay; Schaffer, David V | Integrative biology : quantitative biosciences from nano to macro | 22854634 | 2012 Sep |
| Strain background influences neurotoxicity and behavioral abnormalities in mice expressing the tetracycline transactivator. | Han, Harry J; Allen, Carolyn C; Buchovecky, Christie M; Yetman, Michael J; Born, Heather A; Marin, Miguel A; Rodgers, Shaefali P; Song, Bryan J; Lu, Hui-Chen; Justice, Monica J; Probst, Frank J; Jankowsky, Joanna L | The Journal of neuroscience : the official journal of the Society for Neuroscience | 22855807 | 2012 Aug 1 |
| Alternative nuclear transport for cellular protein quality control. | Rose, April; Schlieker, Christian | Trends in cell biology | 22858153 | 2012 Oct |
| Host remodeling of the gut microbiome and metabolic changes during pregnancy. | Koren, Omry; Goodrich, Julia K; Cullender, Tyler C; Spor, Ayme; Laitinen, Kirsi; Backhed, Helene Kling; Gonzalez, Antonio; Werner, Jeffrey J; Angenent, Largus T; Knight, Rob; Backhed, Fredrik; Isolauri, Erika; Salminen, Seppo; Ley, Ruth E | Cell | 22863002 | 2012 Aug 3 |
| A synthetic biology framework for programming eukaryotic transcription functions. | Khalil, Ahmad S; Lu, Timothy K; Bashor, Caleb J; Ramirez, Cherie L; Pyenson, Nora C; Joung, J Keith; Collins, James J | Cell | 22863014 | 2012 Aug 3 |
| Transient inability to manage proteobacteria promotes chronic gut inflammation in TLR5-deficient mice. | Carvalho, Frederic A; Koren, Omry; Goodrich, Julia K; Johansson, Malin E V; Nalbantoglu, Ilke; Aitken, Jesse D; Su, Yueju; Chassaing, Benoit; Walters, William A; Gonzalez, Antonio; Clemente, Jose C; Cullender, Tyler C; Barnich, Nicolas; Darfeuille-Michaud | Cell host & microbe. | 22863420 | 2012 Aug 16; |
| CSR-1 RNAi pathway positively regulates histone expression in C. elegans. | Avgousti, Daphne C; Palani, Santhosh; Sherman, Yekaterina; Grishok, Alla | The EMBO journal | 22863779 | 2012 Oct 3 |
| Metformin targets ovarian cancer stem cells in vitro and in vivo. | Shank, Jessica J; Yang, Kun; Ghannam, Jacob; Cabrera, Lourdes; Johnston, Carolyn J; Reynolds, R Kevin; Buckanovich, Ronald J | Gynecologic oncology | 22864111 | 2012 Nov |
| Mycobacterium tuberculosis Beijing strains favor transmission but not drug resistance in China. | Yang, Chongguang; Luo, Tao; Sun, Guomei; Qiao, Ke; Sun, Gang; DeRiemer, Kathryn; Mei, Jian; Gao, Qian | Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. | 22865872 | 2012 Nov; |
| PGC7, H3K9me2 and Tet3: regulators of DNA methylation in zygotes. | Kang, Jinsuk; Kalantry, Sundeep; Rao, Anjana | Cell research | 22868271 | 2013 Jan |
| Modeling the latent dimensions of multivariate signaling datasets. | Jensen, Karin J; Janes, Kevin A | Physical biology | 22871687 | 2012 Aug |
| Multiplexed single-molecule force proteolysis measurements using magnetic tweezers. | Adhikari, Arjun S; Chai, Jack; Dunn, Alexander R | Journal of visualized experiments : JoVE | 22871786 | 2012 |
| Variable ligand- and receptor-binding hot spots in key strains of influenza neuraminidase. | Votapka, Lane; Demir, Ozlem; Swift, Robert V; Walker, Ross C; Amaro, Rommie E | Journal of molecular and genetic medicine : an international journal of biomedical research. | 22872804 | 2012; |
| Metabolomic signatures in guinea pigs infected with epidemic-associated W-Beijing strains of Mycobacterium tuberculosis. | Somashekar, Bagganahalli S; Amin, Anita G; Tripathi, Pratima; MacKinnon, Neil; Rithner, Christopher D; Shanley, Crystal A; Basaraba, Randall; Henao-Tamayo, Marcela; Kato-Maeda, Midori; Ramamoorthy, Ayyalusamy; Orme, Ian M; Ordway, Diane J; Chatterjee, Del | Journal of proteome research | 22873951 | 2012 Oct 5 |
| Interplay between the localization and kinetics of phosphorylation in flagellar pole development of the bacterium Caulobacter crescentus. | Tropini, Carolina; Huang, Kerwyn Casey | PLoS computational biology | 22876167 | 2012 |
| Single-shot characterization of enzymatic reaction constants Km and kcat by an acoustic-driven, bubble-based fast micromixer. | Xie, Yuliang; Ahmed, Daniel; Lapsley, Michael Ian; Lin, Sz-Chin Steven; Nawaz, Ahmad Ahsan; Wang, Lin; Huang, Tony Jun | Analytical chemistry | 22880882 | 2012 Sep 4 |
| IRE1ýý induces thioredoxin-interacting protein to activate the NLRP3 inflammasome and promote programmed cell death under irremediable ER stress. | Lerner, Alana G; Upton, John-Paul; Praveen, P V K; Ghosh, Rajarshi; Nakagawa, Yoshimi; Igbaria, Aeid; Shen, Sarah; Nguyen, Vinh; Backes, Bradley J; Heiman, Myriam; Heintz, Nathaniel; Greengard, Paul; Hui, Simon; Tang, Qizhi; Trusina, Ala; Oakes, Scott A; | Cell metabolism | 22883233 | 2012 Aug 8 |
| Association of cystic fibrosis transmembrane conductance regulator gene variants with acute lung injury in African American children with pneumonia*. | Baughn, Julie M; Quasney, Michael W; Simpson, Pippa; Merchant, Daniel; Li, Shun-Hwa; Levy, Hara; Dahmer, Mary K | Critical care medicine | 22890249 | 2012 Nov |
| Iron oxide nanoparticle-based magnetic resonance method to monitor release kinetics from polymeric particles with high resolution. | Chan, Minnie; Schopf, Eric; Sankaranarayanan, Jagadis; Almutairi, Adah | Analytical chemistry | 22891894 | 2012 Sep 18 |
| Real-time full-spectral imaging and affinity measurements from 50 microfluidic channels using nanohole surface plasmon resonance. | Lee, Si Hoon; Lindquist, Nathan C; Wittenberg, Nathan J; Jordan, Luke R; Oh, Sang-Hyun | Lab on a chip | 22895607 | 2012 Oct 21 |
| Adventures in neurobioengineering. | Jasanoff, Alan | ACS chemical neuroscience | 22896800 | 2012 Aug 15 |
| Bioengineered probes for molecular magnetic resonance imaging in the nervous system. | Hsieh, Vivian; Jasanoff, Alan | ACS chemical neuroscience | 22896803 | 2012 Aug 15 |
| Proteogenomic characterization and mapping of nucleosomes decoded by Brd and HP1 proteins. | LeRoy, Gary; Chepelev, Iouri; DiMaggio, Peter A; Blanco, Mario A; Zee, Barry M; Zhao, Keji; Garcia, Benjamin A | Genome biology. | 22897906 | 2012; |
| Identification of novel bioactive aldehyde-modified phosphatidylethanolamines formed by lipid peroxidation. | Guo, Lilu; Chen, Zhongyi; Amarnath, Venkataraman; Davies, Sean S | Free radical biology & medicine | 22898174 | 2012 Sep 15 |
| Interplay between social experiences and the genome: epigenetic consequences for behavior. | Champagne, Frances A | Advances in genetics | 22902125 | 2012 |
| Electrowetting-driven variable-focus microlens on flexible surfaces. | Li, Chenhui; Jiang, Hongrui | Applied physics letters | 22904571 | 2012 Jun 4 |
| High-yield chemical vapor deposition growth of high-quality large-area AB-stacked bilayer graphene. | Liu, Lixin; Zhou, Hailong; Cheng, Rui; Yu, Woo Jong; Liu, Yuan; Chen, Yu; Shaw, Jonathan; Zhong, Xing; Huang, Yu; Duan, Xiangfeng | ACS nano | 22906199 | 2012 Sep 25 |
| Role of Kruppel-like factor 4 in neurogenesis and radial neuronal migration in the developing cerebral cortex. | Qin, Song; Zhang, Chun-Li | Molecular and cellular biology | 22907754 | 2012 Nov |
| Holographically formed, acoustically switchable gratings based on polymer-dispersed liquid crystals. | Liu, Yan Jun; Lu, Mengqian; Ding, Xiaoyun; Leong, Eunice S P; Lin, Sz-Chin Steven; Shi, Jinjie; Teng, Jing Hua; Wang, Lin; Bunning, Timothy J; Huang, Tony Jun | Journal of laboratory automation | 22909448 | 2013 Aug |
| Selective penicillin-binding protein imaging probes reveal substructure in bacterial cell division. | Kocaoglu, Ozden; Calvo, Rebecca A; Sham, Lok-To; Cozy, Loralyn M; Lanning, Bryan R; Francis, Samson; Winkler, Malcolm E; Kearns, Daniel B; Carlson, Erin E | ACS chemical biology | 22909777 | 2012 Oct 19 |
| Examining histone posttranslational modification patterns by high-resolution mass spectrometry. | Lin, Shu; Garcia, Benjamin A | Methods in enzymology | 22910200 | 2012 |
| Aýý alters the connectivity of olfactory neurons in the absence of amyloid plaques in vivo. | Cao, Luxiang; Schrank, Benjamin R; Rodriguez, Steve; Benz, Eric G; Moulia, Thomas W; Rickenbacher, Gregory T; Gomez, Alexis C; Levites, Yona; Edwards, Sarah R; Golde, Todd E; Hyman, Bradley T; Barnea, Gilad; Albers, Mark W | Nature communications | 22910355 | 2012 |
| Early interactions with mother and peers independently build adult social skills and shape BDNF and oxytocin receptor brain levels. | Branchi, Igor; Curley, James P; D'Andrea, Ivana; Cirulli, Francesca; Champagne, Frances A; Alleva, Enrico | Psychoneuroendocrinology | 22910688 | 2013 Apr |
| Fabrication and characterization of beaded SiC quantum rings with anomalous red spectral shift. | Yang, Shikuan; Kiraly, Brian; Wang, William Yi; Shang, Shunli; Cao, Bingqiang; Zeng, Haibo; Zhao, Yanhui; Li, Weizhou; Liu, Zi-Kui; Cai, Weiping; Huang, Tony Jun | Advanced materials (Deerfield Beach, Fla.) | 22911493 | 2012 Nov 2 |
| Chaperone probes and bead-based enhancement to improve the direct detection of mRNA using silicon photonic sensor arrays. | Kindt, Jared T; Bailey, Ryan C | Analytical chemistry | 22913333 | 2012 Sep 18 |
| Se-adenosyl-L-selenomethionine cofactor analogue as a reporter of protein methylation. | Bothwell, Ian R; Islam, Kabirul; Chen, Yuling; Zheng, Weihong; Blum, Gil; Deng, Haiteng; Luo, Minkui | Journal of the American Chemical Society | 22917021 | 2012 Sep 12 |
| Crowd-sourced BioGames: managing the big data problem for next-generation lab-on-a-chip platforms. | Mavandadi, Sam; Dimitrov, Stoyan; Feng, Steve; Yu, Frank; Yu, Richard; Sikora, Uzair; Ozcan, Aydogan | Lab on a chip | 22918378 | 2012 Oct 21 |
| TGFýý signaling: its role in fibrosis formation and myopathies. | MacDonald, Elizabeth M; Cohn, Ronald D | Current opinion in rheumatology | 22918531 | 2012 Nov |
| RNA-Binding Proteins in Amyotrophic Lateral Sclerosis and Neurodegeneration. | Ugras, Scott E; Shorter, James | Neurology research international. | 22919483 | 2012; |
| Site-specific genome editing in Plasmodium falciparum using engineered zinc-finger nucleases. | Straimer, Judith; Lee, Marcus C S; Lee, Andrew H; Zeitler, Bryan; Williams, April E; Pearl, Jocelynn R; Zhang, Lei; Rebar, Edward J; Gregory, Philip D; Llinas, Manuel; Urnov, Fyodor D; Fidock, David A | Nature methods | 22922501 | 2012 Oct |
| Global mapping of translation initiation sites in mammalian cells at single-nucleotide resolution. | Lee, Sooncheol; Liu, Botao; Lee, Soohyun; Huang, Sheng-Xiong; Shen, Ben; Qian, Shu-Bing | Proceedings of the National Academy of Sciences of the United States of America | 22927429 | 2012 Sep 11 |
| Dynamics of protein noise can distinguish between alternate sources of gene-expression variability. | Singh, Abhyudai; Razooky, Brandon S; Dar, Roy D; Weinberger, Leor S | Molecular systems biology | 22929617 | 2012 |
| Graphene: an emerging electronic material. | Weiss, Nathan O; Zhou, Hailong; Liao, Lei; Liu, Yuan; Jiang, Shan; Huang, Yu; Duan, Xiangfeng | Advanced materials (Deerfield Beach, Fla.) | 22930422 | 2012 Nov 14 |
| Physical constraints on the establishment of intracellular spatial gradients in bacteria. | Tropini, Carolina; Rabbani, Naveed; Huang, Kerwyn Casey | BMC biophysics. | 22931750 | 2012 Aug 29; |
| Imaging without lenses: achievements and remaining challenges of wide-field on-chip microscopy. | Greenbaum, Alon; Luo, Wei; Su, Ting-Wei; Gorocs, Zoltan; Xue, Liang; Isikman, Serhan O; Coskun, Ahmet F; Mudanyali, Onur; Ozcan, Aydogan | Nature methods | 22936170 | 2012 Sep |
| Electrokinetic focusing and separation of mammalian cells in conductive biological fluids. | Gao, Jian; Riahi, Reza; Sin, Mandy L Y; Zhang, Shufeng; Wong, Pak Kin | The Analyst | 22937529 | 2012 Nov 21 |
| Lis1 acts as a "clutch" between the ATPase and microtubule-binding domains of the dynein motor. | Huang, Julie; Roberts, Anthony J; Leschziner, Andres E; Reck-Peterson, Samara L | Cell | 22939623 | 2012 Aug 31 |
| A high-throughput chromatin immunoprecipitation approach reveals principles of dynamic gene regulation in mammals. | Garber, Manuel; Yosef, Nir; Goren, Alon; Raychowdhury, Raktima; Thielke, Anne; Guttman, Mitchell; Robinson, James; Minie, Brian; Chevrier, Nicolas; Itzhaki, Zohar; Blecher-Gonen, Ronnie; Bornstein, Chamutal; Amann-Zalcenstein, Daniela; Weiner, Assaf; Frie | Molecular cell | 22940246 | 2012 Sep 14 |
| Loss of tumor suppressor NF1 activates HSF1 to promote carcinogenesis. | Dai, Chengkai; Santagata, Sandro; Tang, Zijian; Shi, Jiayuan; Cao, Junxia; Kwon, Hyoungtae; Bronson, Roderick T; Whitesell, Luke; Lindquist, Susan | The Journal of clinical investigation | 22945628 | 2012 Oct 1 |
| Stuck in the middle: Rac, adhesion, and cytokinesis. | Davies, Tim; Canman, Julie C | The Journal of cell biology. | 22945931 | 2012 Sep 3; |
| Craniofacial and dental development in cardio-facio-cutaneous syndrome: the importance of Ras signaling homeostasis. | Goodwin, A F; Oberoi, S; Landan, M; Charles, C; Groth, J; Martinez, A; Fairley, C; Weiss, L A; Tidyman, W E; Klein, O D; Rauen, K A | Clinical genetics | 22946697 | 2013 Jun |
| Biocompatible polymeric nanoparticles degrade and release cargo in response to biologically relevant levels of hydrogen peroxide. | de Gracia Lux, Caroline; Joshi-Barr, Shivanjali; Nguyen, Trung; Mahmoud, Enas; Schopf, Eric; Fomina, Nadezda; Almutairi, Adah | Journal of the American Chemical Society | 22946840 | 2012 Sep 26 |
| In vitro optimization of EtNBS-PDT against hypoxic tumor environments with a tiered, high-content, 3D model optical screening platform. | Klein, Oliver J; Bhayana, Brijesh; Park, Yong Jin; Evans, Conor L | Molecular pharmaceutics | 22946843 | 2012 Nov 5 |
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| Inhibitors of reactive oxygen species accumulation delay and/or reduce the lethality of several antistaphylococcal agents. | Liu, Yuanli; Liu, Xinghan; Qu, Yilin; Wang, Xiuhong; Li, Liping; Zhao, Xilin | Antimicrobial agents and chemotherapy | 22948880 | 2012 Nov |
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| Paternal social enrichment effects on maternal behavior and offspring growth. | Mashoodh, Rahia; Franks, Becca; Curley, James P; Champagne, Frances A | Proceedings of the National Academy of Sciences of the United States of America | 23045657 | 2012 Oct 16 |
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| Biopsy with thermally-responsive untethered microtools. | Gultepe, Evin; Randhawa, Jatinder S; Kadam, Sachin; Yamanaka, Sumitaka; Selaru, Florin M; Shin, Eun J; Kalloo, Anthony N; Gracias, David H | Advanced materials (Deerfield Beach, Fla.) | 23047708 | 2013 Jan 25 |
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| Antigen-loaded pH-sensitive hydrogel microparticles are taken up by dendritic cells with no requirement for targeting antibodies. | Ruff, Laura E; Mahmoud, Enas A; Sankaranarayanan, Jagadis; Morachis, Jose M; Katayama, Carol D; Corr, Maripat; Hedrick, Stephen M; Almutairi, Adah | Integrative biology : quantitative biosciences from nano to macro | 23060228 | 2013 Jan |
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| Linking prenatal maternal adversity to developmental outcomes in infants: the role of epigenetic pathways. | Monk, Catherine; Spicer, Julie; Champagne, Frances A | Development and psychopathology | 23062303 | 2012 Nov |
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| A Single UV or Near IR Triggering Event Leads to Polymer Degradation into Small Molecules. | de Gracia Lux, Caroline; McFearin, Cathryn L; Joshi-Barr, Shivanjali; Sankaranarayanan, Jagadis; Fomina, Nadezda; Almutairi, Adah | ACS macro letters | 23066523 | 2012 Jul 17 |
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| Subdiffraction-resolution fluorescence microscopy reveals a domain of the centrosome critical for pericentriolar material organization. | Mennella, V; Keszthelyi, B; McDonald, K L; Chhun, B; Kan, F; Rogers, G C; Huang, B; Agard, D A | Nature cell biology. | 23086239 | 2012 Nov; |
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| HCMV gB shares structural and functional properties with gB proteins from other herpesviruses. | Sharma, Sapna; Wisner, Todd W; Johnson, David C; Heldwein, Ekaterina E | Virology | 23089254 | 2013 Jan 20 |
| Adaptation to a new environment allows cooperators to purge cheaters stochastically. | Waite, Adam James; Shou, Wenying | Proceedings of the National Academy of Sciences of the United States of America | 23091010 | 2012 Nov 20 |
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| 3D printed bionic ears. | Mannoor, Manu S; Jiang, Ziwen; James, Teena; Kong, Yong Lin; Malatesta, Karen A; Soboyejo, Winston O; Verma, Naveen; Gracias, David H; McAlpine, Michael C | Nano letters | 23635097 | 2013 Jun 12 |
| feedback between population and evolutionary dynamics determines the fate of social microbial populations. | Sanchez, Alvaro; Gore, Jeff | PLoS biology. | 23637571 | 2013; |
| Thin-capped atheromata with reduced collagen content in pigs develop in coronary arterial regions exposed to persistently low endothelial shear stress. | Koskinas, Konstantinos C; Sukhova, Galina K; Baker, Aaron B; Papafaklis, Michail I; Chatzizisis, Yiannis S; Coskun, Ahmet U; Quillard, Thibaut; Jonas, Michael; Maynard, Charles; Antoniadis, Antonios P; Shi, Guo-Ping; Libby, Peter; Edelman, Elazer R; Feldm | Arteriosclerosis, thrombosis, and vascular biology. | 23640495 | 2013 Jul; |
| Large-scale global identification of protein lysine methylation in vivo. | Cao, Xing-Jun; Arnaudo, Anna M; Garcia, Benjamin A | Epigenetics : official journal of the DNA Methylation Society | 23644510 | 2013 May |
| Epigenetic Modulations of Induced Pluripotent Stem Cells: Novel Therapies and Disease Models. | Huang, Chengyang; Wu, Joseph C | Drug discovery today. Disease models | 23646061 | 2012 |
| An on-chip, multichannel droplet sorter using standing surface acoustic waves. | Li, Sixing; Ding, Xiaoyun; Guo, Feng; Chen, Yuchao; Lapsley, Michael Ian; Lin, Sz-Chin Steven; Wang, Lin; McCoy, J Philip; Cameron, Craig E; Huang, Tony Jun | Analytical chemistry | 23647057 | 2013 Jun 4 |
| Cognitive Training for Improving Executive Function in Chemotherapy-Treated Breast Cancer Survivors. | Kesler, Shelli; Hosseini, S M Hadi; Heckler, Charles; Janelsins, Michelle; Palesh, Oxana; Mustian, Karen; Morrow, Gary | Clinical breast cancer | 23647804 | 2013 May 3 |
| Actuators based on liquid crystalline elastomer materials. | Jiang, Hongrui; Li, Chensha; Huang, Xuezhen | Nanoscale | 23648966 | 2013 Jun 21 |
| Chain-shattering polymeric therapeutics with on-demand drug-release capability. | Zhang, Yanfeng; Yin, Qian; Yin, Lichen; Ma, Liang; Tang, Li; Cheng, Jianjun | Angewandte Chemie (International ed. in English) | 23650111 | 2013 Jun 17 |
| Multimodal magnetic core-shell nanoparticles for effective stem-cell differentiation and imaging. | Shah, Birju; Yin, Perry T; Ghoshal, Shraboni; Lee, Ki-Bum | Angewandte Chemie (International ed. in English) | 23650180 | 2013 Jun 10 |
| The role of SIRT6 protein in aging and reprogramming of human induced pluripotent stem cells. | Sharma, Amit; Diecke, Sebastian; Zhang, Wendy Y; Lan, Feng; He, Chunjiang; Mordwinkin, Nicholas M; Chua, Katrin F; Wu, Joseph C | The Journal of biological chemistry | 23653361 | 2013 Jun 21 |
| Keto-mycolic acid-dependent pellicle formation confers tolerance to drug-sensitive Mycobacterium tuberculosis. | Sambandan, Dhinakaran; Dao, Dee N; Weinrick, Brian C; Vilcheze, Catherine; Gurcha, Sudagar S; Ojha, Anil; Kremer, Laurent; Besra, Gurdyal S; Hatfull, Graham F; Jacobs Jr, William R | mBio. | 23653446 | 2013; |
| The magnetic, relaxometric, and optical properties of gadolinium-catalyzed single walled carbon nanotubes. | Sitharaman, Balaji; Jacobson, Barry D; Wadghiri, Youssef Z; Bryant, Henry; Frank, Joseph | Journal of applied physics | 23653487 | 2013 Apr 7 |
| Interaction of the Capsular Polysaccharide A from Bacteroides fragilis with DC-SIGN on Human Dendritic Cells is Necessary for Its Processing and Presentation to T Cells. | Bloem, Karien; Garcia-Vallejo, Juan J; Vuist, Ilona M; Cobb, Brian A; van Vliet, Sandra J; van Kooyk, Yvette | Frontiers in immunology | 23653626 | 2013 |
| Synthetic biology of antimicrobial discovery. | Zakeri, Bijan; Lu, Timothy K | ACS synthetic biology | 23654251 | 2013 Jul 19 |
| Novel mTOR inhibitory activity of ciclopirox enhances parthenolide antileukemia activity. | Sen, Siddhartha; Hassane, Duane C; Corbett, Cheryl; Becker, Michael W; Jordan, Craig T; Guzman, Monica L | Experimental hematology | 23660068 | 2013 Sep |
| Pan-neuronal maturation but not neuronal subtype differentiation of adult neural stem cells is mechanosensitive. | Keung, Albert J; Dong, Meimei; Schaffer, David V; Kumar, Sanjay | Scientific reports | 23660869 | 2013 |
| Optoelectronic tweezers integrated with lensfree holographic microscopy for wide-field interactive cell and particle manipulation on a chip. | Huang, Kuo-Wei; Su, Ting-Wei; Ozcan, Aydogan; Chiou, Pei-Yu | Lab on a chip | 23661233 | 2013 Jun 21 |
| Accumulation of micron sized iron oxide particles in endothelin-1 induced focal cortical ischemia in rats is independent of cell migration. | Granot, Dorit; Shapiro, Erik M | Magnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine | 23661604 | 2014 Apr |
| Growth differentiation factor 11 is a circulating factor that reverses age-related cardiac hypertrophy. | Loffredo, Francesco S; Steinhauser, Matthew L; Jay, Steven M; Gannon, Joseph; Pancoast, James R; Yalamanchi, Pratyusha; Sinha, Manisha; Dall'Osso, Claudia; Khong, Danika; Shadrach, Jennifer L; Miller, Christine M; Singer, Britta S; Stewart, Alex; Psychogi | Cell | 23663781 | 2013 May 9 |
| Epigenomic analysis of multilineage differentiation of human embryonic stem cells. | Xie, Wei; Schultz, Matthew D; Lister, Ryan; Hou, Zhonggang; Rajagopal, Nisha; Ray, Pradipta; Whitaker, John W; Tian, Shulan; Hawkins, R David; Leung, Danny; Yang, Hongbo; Wang, Tao; Lee, Ah Young; Swanson, Scott A; Zhang, Jiuchun; Zhu, Yun; Kim, Audrey; N | Cell | 23664764 | 2013 May 23 |
| ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering. | Gaj, Thomas; Gersbach, Charles A; Barbas 3rd, Carlos F | Trends in biotechnology | 23664777 | 2013 May 8 |
| Genome-wide chromatin interactions of the Nanog locus in pluripotency, differentiation, and reprogramming. | Apostolou, Effie; Ferrari, Francesco; Walsh, Ryan M; Bar-Nur, Ori; Stadtfeld, Matthias; Cheloufi, Sihem; Stuart, Hannah T; Polo, Jose M; Ohsumi, Toshiro K; Borowsky, Mark L; Kharchenko, Peter V; Park, Peter J; Hochedlinger, Konrad | Cell stem cell | 23665121 | 2013 Jun 6 |
| Using Azido Analogue of S-Adenosyl-L-methionine for Bioorthogonal Profiling of Protein Methylation (BPPM). | Blum, Gil; Islam, Kabirul; Luo, Minkui | Current protocols in chemical biology | 23667794 | 2013 Mar |
| Thiol-ene Enabled Detection of Thiophosphorylated Kinase Substrates. | Garber, Kathleen C A; Carlson, Erin E | ACS chemical biology | 23668631 | 2013 May 17 |
| Lab-on-a-chip technologies for single-molecule studies. | Zhao, Yanhui; Chen, Danqi; Yue, Hongjun; French, Jarrod B; Rufo, Joseph; Benkovic, Stephen J; Huang, Tony Jun | Lab on a chip | 23670195 | 2013 Jun 21 |
| Collective activation of MRI agents via encapsulation and disease-triggered release. | Viger, Mathieu L; Sankaranarayanan, Jagadis; de Gracia Lux, Caroline; Chan, Minnie; Almutairi, Adah | Journal of the American Chemical Society | 23672342 | 2013 May 29 |
| Impulsivity Moderates Promotive Environmental Influences on Adolescent Delinquency: A Comparison Across Family, School, and Neighborhood Contexts. | Chen, Pan; Jacobson, Kristen C | Journal of abnormal child psychology | 23673971 | 2013 May 15 |
| Intestinal CFTR expression alleviates meconium ileus in cystic fibrosis pigs. | Stoltz, David A; Rokhlina, Tatiana; Ernst, Sarah E; Pezzulo, Alejandro A; Ostedgaard, Lynda S; Karp, Philip H; Samuel, Melissa S; Reznikov, Leah R; Rector, Michael V; Gansemer, Nicholas D; Bouzek, Drake C; Alaiwa, Mahmoud H Abou; Hoegger, Mark J; Ludwig, | The Journal of clinical investigation. | 23676501 | 2013 Jun; |
| Peptidoglycan at its peaks: how chromatographic analyses can reveal bacterial cell wall structure and assembly. | Desmarais, Samantha M; De Pedro, Miguel A; Cava, Felipe; Huang, Kerwyn Casey | Molecular microbiology | 23679048 | 2013 Jul |
| Torque spectroscopy of DNA: base-pair stability, boundary effects, backbending, and breathing dynamics. | Oberstrass, Florian C; Fernandes, Louis E; Lebel, Paul; Bryant, Zev | Physical review letters | 23679785 | 2013 Apr 26 |
| Social signals increase monoamine levels in the tegmentum of juvenile Mexican spadefoot toads (Spea multiplicata). | Rodriguez Moncalvo, Veronica G; Moncalvo, Veronica G; Burmeister, Sabrina S; Pfennig, Karin S | Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology | 23681220 | 2013 Aug |
| Draft Genome Sequences of Two Pairs of Human Intestinal Bifidobacterium longum subsp. longum Strains, 44B and 1-6B and 35B and 2-2B, Consecutively Isolated from Two Children after a 5-Year Time Period. | Shkoporov, A N; Efimov, B A; Khokhlova, E V; Chaplin, A V; Kafarskaya, L I; Durkin, A S; McCorrison, J; Torralba, M; Gillis, M; Sutton, G; Weibel, D B; Nelson, K E; Smeianov, V V | Genome announcements. | 23682142 | 2013; |
| Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells. | Shalek, Alex K; Satija, Rahul; Adiconis, Xian; Gertner, Rona S; Gaublomme, Jellert T; Raychowdhury, Raktima; Schwartz, Schraga; Yosef, Nir; Malboeuf, Christine; Lu, Diana; Trombetta, John J; Gennert, Dave; Gnirke, Andreas; Goren, Alon; Hacohen, Nir; Levin | Nature | 23685454 | 2013 Jun 13 |
| viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia. | Amir, El-ad David; Davis, Kara L; Tadmor, Michelle D; Simonds, Erin F; Levine, Jacob H; Bendall, Sean C; Shenfeld, Daniel K; Krishnaswamy, Smita; Nolan, Garry P; Pe'er, Dana | Nature biotechnology | 23685480 | 2013 Jun |
| Cytotoxicity, cytocompatibility, cell-labeling efficiency, and in vitro cellular magnetic resonance imaging of gadolinium-catalyzed single-walled carbon nanotubes. | Avti, Pramod K; Caparelli, Elisabeth D; Sitharaman, Balaji | Journal of biomedical materials research. Part A | 23686792 | 2013 May 18 |
| Vinculin tension distributions of individual stress fibers within cell-matrix adhesions. | Chang, Ching-Wei; Kumar, Sanjay | Journal of cell science | 23687380 | 2013 Jul 15 |
| Regenerative medicine for the kidney: stem cell prospects & challenges. | Li, Yue; Wingert, Rebecca A | Clinical and translational medicine | 23688352 | 2013 |
| Stochastic gene expression in mammals: lessons from olfaction. | Magklara, Angeliki; Lomvardas, Stavros | Trends in cell biology | 23689023 | 2013 May 17 |
| Live-cell imaging of exocyst links its spatiotemporal dynamics to various stages of vesicle fusion. | Rivera-Molina, Felix; Toomre, Derek | The Journal of cell biology | 23690179 | 2013 May 27 |
| Identifying dynamic tuberculosis case-finding policies for HIV/TB coepidemics. | Yaesoubi, Reza; Cohen, Ted | Proceedings of the National Academy of Sciences of the United States of America | 23690585 | 2013 Jun 4 |
| Induced pluripotent stem cell modeling of complex genetic diseases. | Hinson, J Travis; Nakamura, Kenta; Wu, Sean M | Drug discovery today. Disease models | 23690830 | 2012 |
| Deciphering the growth behaviour of Mycobacterium africanum. | Gehre, Florian; Otu, Jacob; DeRiemer, Kathryn; de Sessions, Paola Florez; Hibberd, Martin L; Mulders, Wim; Corrah, Tumani; de Jong, Bouke C; Antonio, Martin | PLoS neglected tropical diseases. | 23696911 | 2013; |
| Membrane potential mediates the cellular binding of nanoparticles. | Shin, Edwin H; Li, Ye; Kumar, Umesh; Sureka, Hursh V; Zhang, Xianren; Payne, Christine K | Nanoscale | 23698734 | 2013 Jul 7 |
| Multifunctional porous silicon nanopillar arrays: antireflection, superhydrophobicity, photoluminescence, and surface-enhanced Raman scattering. | Kiraly, Brian; Yang, Shikuan; Huang, Tony Jun | Nanotechnology | 23703091 | 2013 Jun 21 |
| The innate immune DNA sensor cGAS produces a noncanonical cyclic dinucleotide that activates human STING. | Diner, Elie J; Burdette, Dara L; Wilson, Stephen C; Monroe, Kathryn M; Kellenberger, Colleen A; Hyodo, Mamoru; Hayakawa, Yoshihiro; Hammond, Ming C; Vance, Russell E | Cell reports | 23707065 | 2013 May 30 |
| Longitudinal Relationships Between College Education and Patterns of Heavy Drinking: A Comparison Between Caucasians and African-Americans. | Chen, Pan; Jacobson, Kristen C | The Journal of adolescent health : official publication of the Society for Adolescent Medicine | 23707401 | 2013 May 23 |
| Exome sequencing to identify de novo mutations in sporadic ALS trios. | Chesi, Alessandra; Staahl, Brett T; Jovicic, Ana; Couthouis, Julien; Fasolino, Maria; Raphael, Alya R; Yamazaki, Tomohiro; Elias, Laura; Polak, Meraida; Kelly, Crystal; Williams, Kelly L; Fifita, Jennifer A; Maragakis, Nicholas J; Nicholson, Garth A; King | Nature neuroscience | 23708140 | 2013 May 26 |
| A causal link between prediction errors, dopamine neurons and learning. | Steinberg, Elizabeth E; Keiflin, Ronald; Boivin, Josiah R; Witten, Ilana B; Deisseroth, Karl; Janak, Patricia H | Nature neuroscience. | 23708143 | 2013 Jul; |
| Silicon coupled with plasmon nanocavity generates bright visible hot-luminescence. | Cho, Chang-Hee; Aspetti, Carlos O; Park, Joohee; Agarwal, Ritesh | Nature photonics | 23710256 | 2013 |
| Enzyme-Directed Assembly of a Nanoparticle Probe in Tumor Tissue. | Chien, Miao-Ping; Thompson, Matthew P; Barback, Christopher V; Ku, Ti-Hsuan; Hall, David J; Gianneschi, Nathan C | Advanced materials (Deerfield Beach, Fla.) | 23712821 | 2013 May 28 |
| Sex-specific epigenetic disruption and behavioral changes following low-dose in utero bisphenol A exposure. | Kundakovic, Marija; Gudsnuk, Kathryn; Franks, Becca; Madrid, Jesus; Miller, Rachel L; Perera, Frederica P; Champagne, Frances A | Proceedings of the National Academy of Sciences of the United States of America | 23716699 | 2013 Jun 11 |
| The Ion Channel TRPA1 Is Required for Chronic Itch. | Wilson, Sarah R; Nelson, Aislyn M; Batia, Lyn; Morita, Takeshi; Estandian, Daniel; Owens, David M; Lumpkin, Ellen A; Bautista, Diana M | The Journal of neuroscience : the official journal of the Society for Neuroscience | 23719797 | 2013 May 29 |
| Specification of hepatopancreas progenitors in zebrafish by hnf1ba and wnt2bb. | Lancman, Joseph J; Zvenigorodsky, Natasha; Gates, Keith P; Zhang, Danhua; Solomon, Keely; Humphrey, Rohan K; Kuo, Taiyi; Setiawan, Linda; Verkade, Heather; Chi, Young-In; Jhala, Ulupi S; Wright, Christopher V E; Stainier, Didier Y R; Dong, P Duc Si | Development (Cambridge, England) | 23720049 | 2013 Jul |
| Models of signalling networks - what cell biologists can gain from them and give to them. | Janes, Kevin A; Lauffenburger, Douglas A | Journal of cell science | 23720376 | 2013 May 1 |
| Low power upconverted near-IR light for efficient polymeric nanoparticle degradation and cargo release. | Viger, Mathieu L; Grossman, Madeleine; Fomina, Nadezda; Almutairi, Adah | Advanced materials (Deerfield Beach, Fla.) | 23722298 | 2013 Jul 19 |
| Vitamin D and maternal and child health: overview and implications for dietary requirements. | Uriu-Adams, Janet Y; Obican, Sarah G; Keen, Carl L | Birth defects research. Part C, Embryo today : reviews. | 23723170 | 2013 Mar; |
| linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis. | Maamar, Hedia; Cabili, Moran N; Rinn, John; Raj, Arjun | Genes & development | 23723417 | 2013 Jun 1 |
| BioGames: A Platform for Crowd-Sourced Biomedical Image Analysis and Telediagnosis. | Mavandadi, Sam; Feng, Steve; Yu, Frank; Dimitrov, Stoyan; Yu, Richard; Ozcan, Aydogan | Games for health journal | 23724363 | 2012 Oct 1 |
| Bivalent chromatin marks developmental regulatory genes in the mouse embryonic germline inýývivo. | Sachs, Michael; Onodera, Courtney; Blaschke, Kathryn; Ebata, Kevin T; Song, Jun S; Ramalho-Santos, Miguel | Cell reports | 23727241 | 2013 Jun 27 |
| Tungsten disulfide nanotubes reinforced biodegradable polymers for bone tissue engineering. | Lalwani, Gaurav; Henslee, Allan M; Farshid, Behzad; Parmar, Priyanka; Lin, Liangjun; Qin, Yi-Xian; Kasper, F Kurtis; Mikos, Antonios G; Sitharaman, Balaji | Acta biomaterialia | 23727293 | 2013 Sep |
| Enzymatic production of 'monoclonal stoichiometric' single-stranded DNA oligonucleotides. | Ducani, Cosimo; Kaul, Corinna; Moche, Martin; Shih, William M; Hogberg, Bjorn | Nature methods | 23727986 | 2013 Jul |
| Control of metastatic progression by microRNA regulatory networks. | Pencheva, Nora; Tavazoie, Sohail F | Nature cell biology. | 23728460 | 2013 Jun; |
| Convergent functional genomics of psychiatric disorders. | Niculescu, Alexander B | American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics | 23728881 | 2013 Oct |
| Targeting Mantle Cell Lymphoma with Anti-SYK Nanoparticles. | Cely, Ingrid; Yiv, Seang; Yin, Qian; Shahidzadeh, Anoush; Tang, Li; Cheng, Jianjun; Uckun, Fatih M | Journal of analytical oncology. | 23730399 | 2012 Jun 25; |
| Reading frame correction by targeted genome editing restores dystrophin expression in cells from Duchenne muscular dystrophy patients. | Ousterout, David G; Perez-Pinera, Pablo; Thakore, Pratiksha I; Kabadi, Ami M; Brown, Matthew T; Qin, Xiaoxia; Fedrigo, Olivier; Mouly, Vincent; Tremblay, Jacques P; Gersbach, Charles A | Molecular therapy : the journal of the American Society of Gene Therapy | 23732986 | 2013 Sep |
| Magnetoencephalography correlate of EEG POSTS (positive occipital sharp transients of sleep). | Kakisaka, Yosuke; Wang, Zhong I; Enatsu, Rei; Dubarry, Anne-Sophie; Mosher, John C; Alexopoulos, Andreas V; Burgess, Richard C | Journal of clinical neurophysiology : official publication of the American Electroencephalographic Society | 23733086 | 2013 Jun |
| Wide-field computational color imaging using pixel super-resolved on-chip microscopy. | Greenbaum, Alon; Feizi, Alborz; Akbari, Najva; Ozcan, Aydogan | Optics express | 23736466 | 2013 May 20 |
| C-RAF Mutations Confer Resistance to RAF Inhibitors. | Antony, Rajee; Emery, Caroline M; Sawyer, Allison M; Garraway, Levi A | Cancer research | 23737487 | 2013 Aug 1 |
| Divin: a small molecule inhibitor of bacterial divisome assembly. | Eun, Ye-Jin; Zhou, Maoquan; Kiekebusch, Daniela; Schlimpert, Susan; Trivedi, Rishi R; Bakshi, Somenath; Zhong, Zhou; Wahlig, Taylor A; Thanbichler, Martin; Weibel, Douglas B | Journal of the American Chemical Society | 23738839 | 2013 Jul 3 |
| A metabolomic view of how the human gut microbiota impacts the host metabolome using humanized and gnotobiotic mice. | Marcobal, A; Kashyap, P C; Nelson, T A; Aronov, P A; Donia, M S; Spormann, A; Fischbach, M A; Sonnenburg, J L | The ISME journal | 23739052 | 2013 Jun 6 |
| Dye-sensitized solar cell with energy storage function through PVDF/ZnO nanocomposite counter electrode. | Zhang, Xi; Huang, Xuezhen; Li, Chensha; Jiang, Hongrui | Advanced materials (Deerfield Beach, Fla.) | 23740719 | 2013 Aug 14 |
| Doxycycline alters metabolism and proliferation of human cell lines. | Ahler, Ethan; Sullivan, William J; Cass, Ashley; Braas, Daniel; York, Autumn G; Bensinger, Steven J; Graeber, Thomas G; Christofk, Heather R | PloS one | 23741339 | 2013 |
| Overview of high throughput sequencing technologies to elucidate molecular pathways in cardiovascular diseases. | Churko, Jared M; Mantalas, Gary L; Snyder, Michael P; Wu, Joseph C | Circulation research | 23743227 | 2013 Jun 7 |
| Topographical control of ocular cell types for tissue engineering. | McHugh, Kevin J; Saint-Geniez, Magali; Tao, Sarah L | Journal of biomedical materials research. Part B, Applied biomaterials | 23744715 | 2013 Nov |
| Epigenetic influence of stress and the social environment. | Gudsnuk, Kathryn; Champagne, Frances A | ILAR journal / National Research Council, Institute of Laboratory Animal Resources | 23744967 | 2012 Dec |
| Early origins of adult disease: approaches for investigating the programmable epigenome in humans, nonhuman primates, and rodents. | Ganu, Radhika S; Harris, R Alan; Collins, Kiara; Aagaard, Kjersti M | ILAR journal / National Research Council, Institute of Laboratory Animal Resources | 23744969 | 2012 Dec |
| Mechanical consequences of cell-wall turnover in the elongation of a Gram-positive bacterium. | Misra, Gaurav; Rojas, Enrique R; Gopinathan, Ajay; Huang, Kerwyn Casey | Biophysical journal | 23746506 | 2013 Jun 4 |
| High-throughput optogenetic functional magnetic resonance imaging with parallel computations. | Fang, Zhongnan; Lee, Jin Hyung | Journal of neuroscience methods | 23747482 | 2013 Jun 4 |
| Proteomic and genomic approaches reveal critical functions of H3K9 methylation and heterochromatin protein-1ýý in reprogramming to pluripotency. | Sridharan, Rupa; Gonzales-Cope, Michelle; Chronis, Constantinos; Bonora, Giancarlo; McKee, Robin; Huang, Chengyang; Patel, Sanjeet; Lopez, David; Mishra, Nilamadhab; Pellegrini, Matteo; Carey, Michael; Garcia, Benjamin A; Plath, Kathrin | Nature cell biology | 23748610 | 2013 Jul |
| Mycobacterium tuberculosis mutation rate estimates from different lineages predict substantial differences in the emergence of drug-resistant tuberculosis. | Ford, Christopher B; Shah, Rupal R; Maeda, Midori Kato; Gagneux, Sebastien; Murray, Megan B; Cohen, Ted; Johnston, James C; Gardy, Jennifer; Lipsitch, Marc; Fortune, Sarah M | Nature genetics | 23749189 | 2013 Jul |
| Characterization of a large human transgene following invasin-mediated delivery in a bacterial artificial chromosome. | Gillen, Austin E; Lucas, Catherine A; Haussecker, Pei Ling; Kosak, Steven T; Harris, Ann | Chromosoma | 23749207 | 2013 Oct |
| FGFR fusions in the driver's seat. | Sabnis, Amit J; Bivona, Trever G | Cancer discovery | 23749526 | 2013 Jun |
| Microfluidic multiplexing in bioanalyses. | Araz, M Kursad; Tentori, Augusto M; Herr, Amy E | Journal of laboratory automation | 23757343 | 2013 Oct |
| Astroglial cells regulate the developmental timeline of human neurons differentiated from induced pluripotent stem cells. | Tang, Xin; Zhou, Li; Wagner, Alecia M; Marchetto, Maria C N; Muotri, Alysson R; Gage, Fred H; Chen, Gong | Stem cell research | 23759711 | 2013 Sep |
| Novel resistance functions uncovered using functional metagenomic investigations of resistance reservoirs. | Pehrsson, Erica C; Forsberg, Kevin J; Gibson, Molly K; Ahmadi, Sara; Dantas, Gautam | Frontiers in microbiology. | 23760651 | 2013; |
| Programmable repression and activation of bacterial gene expression using an engineered CRISPR-Cas system. | Bikard, David; Jiang, Wenyan; Samai, Poulami; Hochschild, Ann; Zhang, Feng; Marraffini, Luciano A | Nucleic acids research | 23761437 | 2013 Aug |
| Targeted quantification of low ng/mL level proteins in human serum without immunoaffinity depletion. | Shi, Tujin; Sun, Xuefei; Gao, Yuqian; Fillmore, Thomas L; Schepmoes, Athena A; Zhao, Rui; He, Jintang; Moore, Ronald J; Kagan, Jacob; Rodland, Karin D; Liu, Tao; Liu, Alvin Y; Smith, Richard D; Tang, Keqi; Camp 2nd, David G; Qian, Wei-Jun | Journal of proteome research | 23763644 | 2013 Jul 5 |
| Real-time Closed-loop Control in a Rodent Model of Medically Induced Coma Using Burst Suppression. | Ching, Shinung; Liberman, Max Y; Chemali, Jessica J; Westover, M Brandon; Kenny, Jonathan; Solt, Ken; Purdon, Patrick L; Brown, Emery N | Anesthesiology | 23770601 | 2013 Jun 13 |
| Polar substitutions in helix 3 of the prion protein produce transmembrane isoforms that disturb vesicle trafficking. | Sanchez-Garcia, Jonatan; Arbelaez, Daniela; Jensen, Kurt; Rincon-Limas, Diego E; Fernandez-Funez, Pedro | Human molecular genetics | 23771030 | 2013 Nov 1 |
| Detection of mRNA in living cells by double-stranded locked nucleic acid probes. | Riahi, Reza; Dean, Zachary; Wu, Ting-Hsiang; Teitell, Michael A; Chiou, Pei-Yu; Zhang, Donna D; Wong, Pak Kin | The Analyst | 23772441 | 2013 Sep 7 |
| Resin-assisted enrichment of N-terminal peptides for characterizing proteolytic processing. | Kim, Jong-Seo; Dai, Ziyu; Aryal, Uma K; Moore, Ronald J; Camp 2nd, David G; Baker, Scott E; Smith, Richard D; Qian, Wei-Jun | Analytical chemistry | 23772796 | 2013 Jul 16 |
| Processive ATP-driven substrate disassembly by the N-ethylmaleimide-sensitive factor (NSF) molecular machine. | Cipriano, Daniel J; Jung, Jaemyeong; Vivona, Sandro; Fenn, Timothy D; Brunger, Axel T; Bryant, Zev | The Journal of biological chemistry | 23775070 | 2013 Aug 9 |
| Vaccination with recombinant Mycobacterium tuberculosis PknD attenuates bacterial dissemination to the brain in guinea pigs. | Skerry, Ciaran; Pokkali, Supriya; Pinn, Michael; Be, Nicholas A; Harper, Jamie; Karakousis, Petros C; Jain, Sanjay K | PloS one | 23776655 | 2013 |
| Mutations in Hedgehog pathway genes in fetal rhabdomyomas. | Hettmer, Simone; Teot, Lisa A; van Hummelen, Paul; MacConaill, Laura; Bronson, Roderick T; Dall'Osso, Claudia; Mao, Junhao; McMahon, Andrew P; Gruber, Peter J; Grier, Holcombe E; Rodriguez-Galindo, Carlos; Fletcher, Christopher D; Wagers, Amy J | The Journal of pathology | 23780909 | 2013 Sep |
| In vivo cardiac reprogramming contributes to zebrafish heart regeneration. | Zhang, Ruilin; Han, Peidong; Yang, Hongbo; Ouyang, Kunfu; Lee, Derek; Lin, Yi-Fan; Ocorr, Karen; Kang, Guson; Chen, Ju; Stainier, Didier Y R; Yelon, Deborah; Chi, Neil C | Nature | 23783515 | 2013 Jun 27 |
| Perfusion-decellularized pancreas as a natural 3D scaffold for pancreatic tissue and whole organ engineering. | Goh, Saik-Kia; Bertera, Suzanne; Olsen, Phillip; Candiello, Joseph E; Halfter, Willi; Uechi, Guy; Balasubramani, Manimalha; Johnson, Scott A; Sicari, Brian M; Kollar, Elizabeth; Badylak, Stephen F; Banerjee, Ipsita | Biomaterials | 23787110 | 2013 Sep |
| Postweaning exposure to a high-fat diet is associated with alterations to the hepatic histone code in Japanese macaques. | Suter, Melissa A; Takahashi, Diana; Grove, Kevin L; Aagaard, Kjersti M | Pediatric research | 23788059 | 2013 Jun 20 |
| Advances in lectin microarray technology: optimized protocols for piezoelectric print conditions. | Pilobello, Kanoelani T; Agrawal, Praveen; Rouse, Richard; Mahal, Lara K | Current protocols in chemical biology. | 23788322 | 2013; |
| Profiling protein methylation with cofactor analog containing terminal alkyne functionality. | Blum, Gil; Bothwell, Ian R; Islam, Kabirul; Luo, Minkui | Current protocols in chemical biology | 23788324 | 2013 Mar 1 |
| Stage-specific regulation of reprogramming to induced pluripotent stem cells by wnt signaling and T cell factor proteins. | Ho, Ritchie; Papp, Bernadett; Hoffman, Jackson A; Merrill, Bradley J; Plath, Kathrin | Cell reports | 23791530 | 2013 Jun 27 |
| Rats are the smart choice: Rationale for a renewed focus on rats in behavioral genetics. | Parker, Clarissa C; Chen, Hao; Flagel, Shelly B; Geurts, Aron M; Richards, Jerry B; Robinson, Terry E; Solberg Woods, Leah C; Palmer, Abraham A | Neuropharmacology. | 23791960 | 2014 Jan; |
| Set and setting: how behavioral state regulates sensory function and plasticity. | Aton, Sara J | Neurobiology of learning and memory. | 23792020 | 2013 Nov; |
| Application of time-resolved fluorescence for direct and continuous probing of release from polymeric delivery vehicles. | Viger, Mathieu L; Sheng, Wangzhong; McFearin, Cathryn L; Berezin, Mikhail Y; Almutairi, Adah | Journal of controlled release : official journal of the Controlled Release Society | 23792808 | 2013 Nov 10 |
| The adaptive variant EDARV370A is associated with straight hair in East Asians. | Tan, Jingze; Yang, Yajun; Tang, Kun; Sabeti, Pardis C; Jin, Li; Wang, Sijia | Human genetics | 23793515 | 2013 Oct |
| Default mode network connectivity distinguishes chemotherapy-treated breast cancer survivors from controls. | Kesler, Shelli R; Wefel, Jeffrey S; Hosseini, S M Hadi; Cheung, Maria; Watson, Christa L; Hoeft, Fumiko | Proceedings of the National Academy of Sciences of the United States of America | 23798392 | 2013 Jul 9 |
| Vibrational imaging of newly synthesized proteins in live cells by stimulated Raman scattering microscopy. | Wei, Lu; Yu, Yong; Shen, Yihui; Wang, Meng C; Min, Wei | Proceedings of the National Academy of Sciences of the United States of America. | 23798434 | 2013 Jul 9; |
| Chemical vapour deposition growth of large single crystals of monolayer and bilayer graphene. | Zhou, Hailong; Yu, Woo Jong; Liu, Lixin; Cheng, Rui; Chen, Yu; Huang, Xiaoqing; Liu, Yuan; Wang, Yang; Huang, Yu; Duan, Xiangfeng | Nature communications | 23803650 | 2013 |
| The ZFP-1(AF10)/DOT-1 complex opposes H2B ubiquitination to reduce Pol II transcription. | Cecere, Germano; Hoersch, Sebastian; Jensen, Morten B; Dixit, Shiv; Grishok, Alla | Molecular cell | 23806335 | 2013 Jun 27 |
| Vitamin C induces Tet-dependent DNA demethylation and a blastocyst-like state in ES cells. | Blaschke, Kathryn; Ebata, Kevin T; Karimi, Mohammad M; Zepeda-Martinez, Jorge A; Goyal, Preeti; Mahapatra, Sahasransu; Tam, Angela; Laird, Diana J; Hirst, Martin; Rao, Anjana; Lorincz, Matthew C; Ramalho-Santos, Miguel | Nature | 23812591 | 2013 Aug 8 |
| Quantitative assessment of ratiometric bimolecular beacons as a tool for imaging single engineered RNA transcripts and measuring gene expression in living cells. | Zhang, Xuemei; Song, Yang; Shah, Akash Y; Lekova, Virzhiniya; Raj, Arjun; Huang, Ling; Behlke, Mark A; Tsourkas, Andrew | Nucleic acids research. | 23814183 | 2013 Aug; |
| Speckle-scale focusing in the diffusive regime with time-reversal of variance-encoded light (TROVE). | Judkewitz, Benjamin; Wang, Ying Min; Horstmeyer, Roarke; Mathy, Alexandre; Yang, Changhuei | Nature photonics | 23814605 | 2013 Apr 1 |
| Intramolecular Cyclization for Stimuli-Controlled Depolymerization of Polycaprolactone Particles Leading to Disassembly and Payload Release. | de Gracia Lux, Caroline; Almutairi, Adah | ACS macro letters | 23814697 | 2013 May 21 |
| Dysregulation of PAD4-mediated citrullination of nuclear GSK3ýý activates TGF-ýý signaling and induces epithelial-to-mesenchymal transition in breast cancer cells. | Stadler, Sonja C; Vincent, C Theresa; Fedorov, Victor D; Patsialou, Antonia; Cherrington, Brian D; Wakshlag, Joseph J; Mohanan, Sunish; Zee, Barry M; Zhang, Xuesen; Garcia, Benjamin A; Condeelis, John S; Brown, Anthony M C; Coonrod, Scott A; Allis, C Davi | Proceedings of the National Academy of Sciences of the United States of America | 23818587 | 2013 Jul 16 |
| The aging brain and anesthesia. | Brown, Emery N; Purdon, Patrick L | Current opinion in anaesthesiology | 23820102 | 2013 Aug |
| Towards a whole-cell modeling approach for synthetic biology. | Purcell, Oliver; Jain, Bonny; Karr, Jonathan R; Covert, Markus W; Lu, Timothy K | Chaos (Woodbury, N.Y.) | 23822510 | 2013 Jun |
| Engineering Unnatural Variants of Plantazolicin through Codon Reprogramming. | Deane, Caitlin D; Melby, Joel O; Molohon, Katie J; Susarrey, Aziz R; Mitchell, Douglas A | ACS chemical biology | 23823732 | 2013 Jul 3 |
| Natural selection in a bangladeshi population from the cholera-endemic ganges river delta. | Karlsson, Elinor K; Harris, Jason B; Tabrizi, Shervin; Rahman, Atiqur; Shlyakhter, Ilya; Patterson, Nick; O'Dushlaine, Colm; Schaffner, Stephen F; Gupta, Sameer; Chowdhury, Fahima; Sheikh, Alaullah; Shin, Ok Sarah; Ellis, Crystal; Becker, Christine E; Stu | Science translational medicine. | 23825302 | 2013 Jul 03; |
| Thalamocortical mechanisms for the anteriorization of alpha rhythms during propofol-induced unconsciousness. | Vijayan, Sujith; Ching, Shinung; Purdon, Patrick L; Brown, Emery N; Kopell, Nancy J | The Journal of neuroscience : the official journal of the Society for Neuroscience | 23825412 | 2013 Jul 3 |
| Optimized Infectivity of the Cell-Free Single-Cycle Human Immunodeficiency Viruses Type 1 (HIV-1) and Its Restriction by Host Cells. | Kim, Jin H; Song, Hanna; Austin, Jamie L; Cheng, Wei | PloS one. | 23825637 | 2013; |
| A quantitative atlas of histone modification signatures from human cancer cells. | Leroy, Gary; Dimaggio, Peter A; Chan, Eric Y; Zee, Barry M; Blanco, M Andres; Bryant, Barbara; Flaniken, Ian Z; Liu, Sherry; Kang, Yibin; Trojer, Patrick; Garcia, Benjamin A | Epigenetics & chromatin | 23826629 | 2013 |
| Sum of the parts: composition and architecture of the bacterial extracellular matrix. | McCrate, Oscar A; Zhou, Xiaoxue; Reichhardt, Courtney; Cegelski, Lynette | Journal of molecular biology | 23827139 | 2013 Nov 15 |
| Expression of arginine vasotocin receptors in the developing zebrafish CNS. | Iwasaki, Kenichi; Taguchi, Meari; Bonkowsky, Joshua L; Kuwada, John Y | Gene expression patterns : GEP. | 23830982 | 2013 Dec; |
| The AMPK-related kinase SNARK regulates hepatitis C virus replication and pathogenesis through enhancement of TGF-* signaling. | Goto, Kaku; Lin, Wenyu; Zhang, Leiliang; Jilg, Nikolaus; Shao, Run-Xuan; Schaefer, Esperance A K; Zhao, Hong; Fusco, Dahlene N; Peng, Lee F; Kato, Naoya; Chung, Raymond T | Journal of hepatology. | 23831117 | 2013 Nov; |
| Transforming potential and matrix stiffness co-regulate confinement sensitivity of tumor cell migration. | Pathak, Amit; Kumar, Sanjay | Integrative biology : quantitative biosciences from nano to macro | 23832051 | 2013 Aug |
| Bacterial growth and adaptation in microdroplet chemostats. | Jakiela, Slawomir; Kaminski, Tomasz S; Cybulski, Olgierd; Weibel, Douglas B; Garstecki, Piotr | Angewandte Chemie (International ed. in English) | 23832572 | 2013 Aug 19 |
| Light-responsive helical polypeptides capable of reducing toxicity and unpacking DNA: toward nonviral gene delivery. | Yin, Lichen; Tang, Haoyu; Kim, Kyung Hoon; Zheng, Nan; Song, Ziyuan; Gabrielson, Nathan P; Lu, Hua; Cheng, Jianjun | Angewandte Chemie (International ed. in English) | 23832670 | 2013 Aug 26 |
| Circulating Tumor Cell Enrichment Based on Physical Properties. | Harouaka, Ramdane A; Nisic, Merisa; Zheng, Si-Yang | Journal of laboratory automation | 23832928 | 2013 Jul 5 |
| Complex chemoattractive and chemorepellent Kit signals revealed by direct imaging of murine mast cells in microfluidic gradient chambers. | Shamloo, Amir; Manchandia, Milan; Ferreira, Meghaan; Mani, Maheswaran; Nguyen, Christopher; Jahn, Thomas; Weinberg, Kenneth; Heilshorn, Sarah | Integrative biology : quantitative biosciences from nano to macro | 23835699 | 2013 Aug |
| Overhauser Dynamic Nuclear Polarization-Enhanced NMR Relaxometry. | Franck, John M; Kausik, Ravinath; Han, Songi | Microporous and mesoporous materials : the official journal of the International Zeolite Association | 23837010 | 2013 Sep 15 |
| Expanding the structural diversity of polyketides by exploring the cofactor tolerance of an inline methyltransferase domain. | Winter, Jaclyn M; Chiou, Grace; Bothwell, Ian R; Xu, Wei; Garg, Neil K; Luo, Minkui; Tang, Yi | Organic letters | 23837609 | 2013 Jul 19 |
| Antibody, T-cell and dendritic cell immunotherapy for malignant brain tumors. | Chandramohan, Vidyalakshmi; Mitchell, Duane A; Johnson, Laura A; Sampson, John H; Bigner, Darell D | Future oncology (London, England). | 23837761 | 2013 Jul; |
| Interactions between B lymphocytes and the osteoblast lineage in bone marrow. | Panaroni, Cristina; Wu, Joy Y | Calcified tissue international | 23839529 | 2013 Sep |
| Bacteria-human somatic cell lateral gene transfer is enriched in cancer samples. | Riley, David R; Sieber, Karsten B; Robinson, Kelly M; White, James Robert; Ganesan, Ashwinkumar; Nourbakhsh, Syrus; Dunning Hotopp, Julie C | PLoS computational biology | 23840181 | 2013 Jun |
| Influence of choice of null network on small-world parameters of structural correlation networks. | Hosseini, S M Hadi; Kesler, Shelli R | PloS one | 23840672 | 2013 |
| In vivo robotics: the automation of neuroscience and other intact-system biological fields. | Kodandaramaiah, Suhasa B; Boyden, Edward S; Forest, Craig R | Annals of the New York Academy of Sciences | 23841584 | 2013 Jul 10 |
| Reduction of human defensin 5 affords a high-affinity zinc-chelating peptide. | Zhang, Yunfei; Cougnon, Fabien B L; Wanniarachchi, Yoshitha A; Hayden, Joshua A; Nolan, Elizabeth M | ACS chemical biology | 23841778 | 2013 Sep 20 |
| Tuning ligand density on intravenous hemostatic nanoparticles dramatically increases survival following blunt trauma. | Shoffstall, Andrew J; Everhart, Lydia M; Varley, Matthew E; Soehnlen, Eric S; Shick, Adam M; Ustin, Jeffrey S; Lavik, Erin B | Biomacromolecules. | 23841817 | 2013 Aug 12; |
| Probing cell-cell communication with microfluidic devices. | Guo, Feng; French, Jarrod B; Li, Peng; Zhao, Hong; Chan, Chung Yu; Fick, James R; Benkovic, Stephen J; Huang, Tony Jun | Lab on a chip | 23843092 | 2013 Aug 21 |
| Mutations in the cytoplasmic tail of herpes simplex virus 1 gH reduce the fusogenicity of gB in transfected cells. | Silverman, Jessica L; Heldwein, Ekaterina E | Journal of virology. | 23843635 | 2013 Sep; |
| Intracellular water exchange for measuring the dry mass, water mass and changes in chemical composition of living cells. | Feijó Delgado, Francisco; Cermak, Nathan; Hecht, Vivian C; Son, Sungmin; Li, Yingzhong; Knudsen, Scott M; Olcum, Selim; Higgins, John M; Chen, Jianzhu; Grover, William H; Manalis, Scott R | PloS one. | 23844039 | 2013; |
| TB: the Yin and Yang of lipid mediators. | Tobin, David M; Ramakrishnan, Lalita | Current opinion in pharmacology | 23849093 | 2013 Aug |
| DNA methylation impacts gene expression and ensures hypoxic survival of Mycobacterium tuberculosis. | Shell, Scarlet S; Prestwich, Erin G; Baek, Seung-Hun; Shah, Rupal R; Sassetti, Christopher M; Dedon, Peter C; Fortune, Sarah M | PLoS pathogens | 23853579 | 2013 Jul |
| B cells regulate neutrophilia during Mycobacterium tuberculosis infection and BCG vaccination by modulating the interleukin-17 response. | Kozakiewicz, Lee; Chen, Yong; Xu, Jiayong; Wang, Yanhua; Dunussi-Joannopoulos, Kyri; Ou, Qinglin; Flynn, Joanne L; Porcelli, Steven A; Jacobs Jr, William R; Chan, John | PLoS pathogens. | 23853593 | 2013; |
| Dot by dot: analyzing the glycome using lectin microarrays. | Ribeiro, Joao P; Mahal, Lara K | Current opinion in chemical biology | 23856055 | 2013 Jul 12 |
| Metabolic modeling of species interaction in the human microbiome elucidates community-level assembly rules. | Levy, Roie; Borenstein, Elhanan | Proceedings of the National Academy of Sciences of the United States of America. | 23858463 | 2013 Jul 30; |
| Molecular tension sensors report forces generated by single integrin molecules in living cells. | Morimatsu, Masatoshi; Mekhdjian, Armen H; Adhikari, Arjun S; Dunn, Alexander R | Nano letters | 23859772 | 2013 Sep 11 |
| Poly(lactic-co-glycolic acid) encapsulated gadolinium oxide nanoparticles for MRI-based cell tracking. | Bennewitz, Margaret F; Williams, Simone S; Nkansah, Michael K; Shapiro, Erik M | Journal of nanoscience and nanotechnology | 23862407 | 2013 Jun |
| Gene transcription is coordinated with, but not dependent on, cell divisions during C. elegans embryonic fate specification. | Nair, Gautham; Walton, Travis; Murray, John Isaac; Raj, Arjun | Development (Cambridge, England) | 23863485 | 2013 Aug |
| Steric effects in peptide and protein exchange with activated disulfides. | Kerr, Jason; Schlosser, Jessica L; Griffin, Donald R; Wong, Darice Y; Kasko, Andrea M | Biomacromolecules | 23865598 | 2013 Aug 12 |
| Biomolecular analysis with microring resonators: applications in multiplexed diagnostics and interaction screening. | Kindt, Jared T; Bailey, Ryan C | Current opinion in chemical biology | 23871688 | 2013 Oct |
| Dimer dynamics and filament organization of the bacterial cell division protein FtsA. | Hsin, Jen; Fu, Rui; Huang, Kerwyn Casey | Journal of molecular biology. | 23871894 | 2013 Nov 15; |
| Small molecules enable neurogenin 2 to efficiently convert human fibroblasts into cholinergic neurons. | Liu, Meng-Lu; Zang, Tong; Zou, Yuhua; Chang, Joshua C; Gibson, Jay R; Huber, Kimberly M; Zhang, Chun-Li | Nature communications | 23873306 | 2013 Jul 19 |
| Production of ýý-galactosylceramide by a prominent member of the human gut microbiota. | Wieland Brown, Laura C; Penaranda, Cristina; Kashyap, Purna C; Williams, Brianna B; Clardy, Jon; Kronenberg, Mitchell; Sonnenburg, Justin L; Comstock, Laurie E; Bluestone, Jeffrey A; Fischbach, Michael A | PLoS biology | 23874157 | 2013 Jul |
| Optimal dynamics for quality control in spatially distributed mitochondrial networks. | Patel, Pinkesh K; Shirihai, Orian; Huang, Kerwyn Casey | PLoS computational biology | 23874166 | 2013 Jul |
| Genome-scale co-evolutionary inference identifies functions and clients of bacterial Hsp90. | Press, Maximilian O; Li, Hui; Creanza, Nicole; Kramer, Gunter; Queitsch, Christine; Sourjik, Victor; Borenstein, Elhanan | PLoS genetics | 23874229 | 2013 Jul |
| An enzyme that inactivates the inflammatory mediator leukotriene b4 restricts mycobacterial infection. | Tobin, David M; Roca, Francisco J; Ray, John P; Ko, Dennis C; Ramakrishnan, Lalita | PloS one | 23874453 | 2013 |
| Structural and functional insight into an unexpectedly selective N-methyltransferase involved in plantazolicin biosynthesis. | Lee, Jaeheon; Hao, Yue; Blair, Patricia M; Melby, Joel O; Agarwal, Vinayak; Burkhart, Brandon J; Nair, Satish K; Mitchell, Douglas A | Proceedings of the National Academy of Sciences of the United States of America | 23878226 | 2013 Aug 6 |
| A computational pipeline for quantification of pulmonary infections in small animal models using serial PET-CT imaging. | Bagci, Ulas; Foster, Brent; Miller-Jaster, Kirsten; Luna, Brian; Dey, Bappaditya; Bishai, William R; Jonsson, Colleen B; Jain, Sanjay; Mollura, Daniel J | EJNMMI research. | 23879987 | 2013 Jul 23; |
| Local cortical dynamics of burst suppression in the anaesthetized brain. | Lewis, Laura D; Ching, Shinung; Weiner, Veronica S; Peterfreund, Robert A; Eskandar, Emad N; Cash, Sydney S; Brown, Emery N; Purdon, Patrick L | Brain : a journal of neurology | 23887187 | 2013 Sep |
| The vacuole within: how cellular organization dictates notochord function. | Ellis, Kathryn; Hoffman, Brenton D; Bagnat, Michel | Bioarchitecture | 23887209 | 2013 May-Jun |
| Real-time electrical detection of nitric oxide in biological systems with sub-nanomolar sensitivity. | Jiang, Shan; Cheng, Rui; Wang, Xiang; Xue, Teng; Liu, Yuan; Nel, Andre; Huang, Yu; Duan, Xiangfeng | Nature communications | 23887829 | 2013 |
| FtsZ protofilaments use a hinge-opening mechanism for constrictive force generation. | Li, Ying; Hsin, Jen; Zhao, Lingyun; Cheng, Yiwen; Shang, Weina; Huang, Kerwyn Casey; Wang, Hong-Wei; Ye, Sheng | Science (New York, N.Y.) | 23888039 | 2013 Jul 26 |
| Optical detection and sizing of single nanoparticles using continuous wetting films. | Hennequin, Yves; Allier, Cedric P; McLeod, Euan; Mudanyali, Onur; Migliozzi, Daniel; Ozcan, Aydogan; Dinten, Jean-Marc | ACS nano | 23889001 | 2013 Sep 24 |
| Preexisting high frequencies of memory CD8+ T cells favor rapid memory differentiation and preservation of proliferative potential upon boosting. | Fraser, Kathryn A; Schenkel, Jason M; Jameson, Stephen C; Vezys, Vaiva; Masopust, David | Immunity | 23890070 | 2013 Jul 25 |
| Biology and Mechanisms of Short RNAs in Caenorhabditis elegans. | Grishok, Alla | Advances in genetics | 23890211 | 2013 |
| Real-time segmentation of burst suppression patterns in critical care EEG monitoring. | Brandon Westover, M; Shafi, Mouhsin M; Ching, Shinung; Chemali, Jessica J; Purdon, Patrick L; Cash, Sydney S; Brown, Emery N | Journal of neuroscience methods | 23891828 | 2013 Sep 30 |
| Electrokinetic stringency control in self-assembled monolayer-based biosensors for multiplex urinary tract infection diagnosis. | Liu, Tingting; Sin, Mandy L Y; Pyne, Jeff D; Gau, Vincent; Liao, Joseph C; Wong, Pak Kin | Nanomedicine : nanotechnology, biology, and medicine | 23891989 | 2014 Jan |
| RNA-guided gene activation by CRISPR-Cas9-based transcription factors. | Perez-Pinera, Pablo; Kocak, D Dewran; Vockley, Christopher M; Adler, Andrew F; Kabadi, Ami M; Polstein, Lauren R; Thakore, Pratiksha I; Glass, Katherine A; Ousterout, David G; Leong, Kam W; Guilak, Farshid; Crawford, Gregory E; Reddy, Timothy E; Gersbach, | Nature methods | 23892895 | 2013 Oct |
| Proteolysis controls endogenous substance P levels. | Mitchell, Andrew J; Lone, Anna Mari; Tinoco, Arthur D; Saghatelian, Alan | PloS one | 23894327 | 2013 |
| Combining genomic and proteomic approaches for epigenetics research. | Han, Yumiao; Garcia, Benjamin A | Epigenomics | 23895656 | 2013 Aug |
| Ant genomics sheds light on the molecular regulation of social organization. | Libbrecht, Romain; Oxley, Peter R; Kronauer, Daniel J C; Keller, Laurent | Genome biology. | 23895728 | 2013; |
| A rational design of cosolvent exfoliation of layered materials by directly probing liquid-solid interaction. | Halim, Udayabagya; Zheng, Chu Ran; Chen, Yu; Lin, Zhaoyang; Jiang, Shan; Cheng, Rui; Huang, Yu; Duan, Xiangfeng | Nature communications | 23896793 | 2013 |
| An acoustofluidic micromixer based on oscillating sidewall sharp-edges. | Huang, Po-Hsun; Xie, Yuliang; Ahmed, Daniel; Rufo, Joseph; Nama, Nitesh; Chen, Yuchao; Chan, Chung Yu; Huang, Tony Jun | Lab on a chip | 23896797 | 2013 Oct 7 |
| AIEC pathobiont instigates chronic colitis in susceptible hosts by altering microbiota composition. | Chassaing, Benoit; Koren, Omry; Carvalho, Frederic A; Ley, Ruth E; Gewirtz, Andrew T | Gut. | 23896971 | 2014 Jul; |
| In situ mechanotransduction via vinculin regulates stem cell differentiation. | Holle, Andrew W; Tang, Xinyi; Vijayraghavan, Deepthi; Vincent, Ludovic G; Fuhrmann, Alexander; Choi, Yu Suk; Del Alamo, Juan C; Engler, Adam J | Stem cells (Dayton, Ohio) | 23897765 | 2013 Jul 29 |
| Strain-induced large exciton energy shifts in buckled CdS nanowires. | Sun, Liaoxin; Kim, Do Hyun; Oh, Kyu Hwan; Agarwal, Ritesh | Nano letters. | 23899018 | 2013 Aug 14; |
| Effects of vascular-endothelial protein tyrosine phosphatase inhibition on breast cancer vasculature and metastatic progression. | Goel, Shom; Gupta, Nisha; Walcott, Brian P; Snuderl, Matija; Kesler, Cristina T; Kirkpatrick, Nathaniel D; Heishi, Takahiro; Huang, Yuhui; Martin, John D; Ager, Eleanor; Samuel, Rekha; Wang, Shuhan; Yazbek, John; Vakoc, Benjamin J; Peterson, Randall T; Pa | Journal of the National Cancer Institute | 23899555 | 2013 Aug 21 |
| Surface acoustic wave microfluidics. | Ding, Xiaoyun; Li, Peng; Lin, Sz-Chin Steven; Stratton, Zackary S; Nama, Nitesh; Guo, Feng; Slotcavage, Daniel; Mao, Xiaole; Shi, Jinjie; Costanzo, Francesco; Huang, Tony Jun | Lab on a chip | 23900527 | 2013 Sep 21 |
| Serum drug concentrations predictive of pulmonary tuberculosis outcomes. | Pasipanodya, Jotam G; McIlleron, Helen; Burger, André; Wash, Peter A; Smith, Peter; Gumbo, Tawanda | The Journal of infectious diseases | 23901086 | 2013 Nov 01 |
| Noninvasive molecular imaging of tuberculosis-associated inflammation with radioiodinated DPA-713. | Foss, Catherine A; Harper, Jamie S; Wang, Haofan; Pomper, Martin G; Jain, Sanjay K | The Journal of infectious diseases | 23901092 | 2013 Dec 15 |
| Deep brain stimulation of the ventral striatum/anterior limb of the internal capsule in thalamic pain syndrome: study protocol for a pilot randomized controlled trial. | Plow, Ela B; Malone Jr, Donald A; Machado, Andre | Trials | 23902631 | 2013 |
| Histone variant H3.3 maintains a decondensed chromatin state essential for mouse preimplantation development. | Lin, Chih-Jen; Conti, Marco; Ramalho-Santos, Miguel | Development (Cambridge, England) | 23903189 | 2013 Sep |
| Associations between multivitamin supplement use and alcohol consumption before pregnancy: Pregnancy Risk Assessment Monitoring System, 2004 to 2008. | Weiss, Lauren A; Chambers, Christina D | Alcoholism, clinical and experimental research. | 23906504 | 2013 Sep; |
| Cell-autonomous regulation of brown fat identity gene UCP1 by unliganded vitamin D receptor. | Malloy, Peter J; Feldman, Brian J | Molecular endocrinology (Baltimore, Md.) | 23906633 | 2013 Oct |
| Developmental effects of serotonin 1A autoreceptors on anxiety and social behavior. | Donaldson, Zoe R; Piel, David A; Santos, Tabia L; Richardson-Jones, Jesse; Leonardo, E David; Beck, Sheryl G; Champagne, Frances A; Hen, Rene | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | 23907404 | 2014 Jan |
| Mathematical modeling of eukaryotic cell migration: insights beyond experiments. | Danuser, Gaudenz; Allard, Jun; Mogilner, Alex | Annual review of cell and developmental biology. | 23909278 | 2013; |
| PQM-1 Complements DAF-16 as a Key Transcriptional Regulator of DAF-2-Mediated Development and Longevity. | Tepper, Ronald G; Ashraf, Jasmine; Kaletsky, Rachel; Kleemann, Gunnar; Murphy, Coleen T; Bussemaker, Harmen J | Cell | 23911329 | 2013 Aug 1 |
| Tumor-associated macrophages and stromal TNF-ýý regulate collagen structure in a breast tumor model as visualized by second harmonic generation. | Burke, Ryan M; Madden, Kelley S; Perry, Seth W; Zettel, Martha L; Brown 3rd, Edward B | Journal of biomedical optics | 23912760 | 2013 Aug |
| Adding an unnatural covalent bond to proteins through proximity-enhanced bioreactivity. | Xiang, Zheng; Ren, Haiyan; Hu, Ying S; Coin, Irene; Wei, Jing; Cang, Hu; Wang, Lei | Nature methods | 23913257 | 2013 Sep |
| Visualizing SNVs to quantify allele-specific expression in single cells. | Levesque, Marshall J; Ginart, Paul; Wei, Yichen; Raj, Arjun | Nature methods | 23913259 | 2013 Sep |
| Polymeric Nanomedicines Based on Poly(lactide) and Poly(lactide-co-glycolide). | Tong, Rong; Gabrielson, Nathan P; Fan, Timothy M; Cheng, Jianjun | Current opinion in solid state & materials science | 23914135 | 2012 Dec 1 |
| Sex-specific and strain-dependent effects of early life adversity on behavioral and epigenetic outcomes. | Kundakovic, Marija; Lim, Sean; Gudsnuk, Kathryn; Champagne, Frances A | Frontiers in psychiatry. | 23914177 | 2013; |
| In Vivo Whole Animal Fluorescence Imaging of a Microparticle-Based Oral Vaccine Containing (CuInSexS2-x)/ZnS Core/Shell Quantum Dots. | Panthani, Matthew G; Khan, Tarik A; Reid, Dariya K; Hellebusch, Daniel J; Rasch, Michael R; Maynard, Jennifer A; Korgel, Brian A | Nano letters | 23915166 | 2013 Aug 9 |
| Proteomic characterization of novel histone post-translational modifications. | Arnaudo, Anna M; Garcia, Benjamin A | Epigenetics & chromatin | 23916056 | 2013 |
| Non-exomic and synonymous variants in ABCA4 are an important cause of Stargardt disease. | Braun, Terry A; Mullins, Robert F; Wagner, Alex H; Andorf, Jeaneen L; Johnston, Rebecca M; Bakall, Benjamin B; Deluca, Adam P; Fishman, Gerald A; Lam, Byron L; Weleber, Richard G; Cideciyan, Artur V; Jacobson, Samuel G; Sheffield, Val C; Tucker, Budd A; Stone, Edwin M | Human molecular genetics. | 23918662 | 2013 Dec 20; |
| Simultaneous profiling of 194 distinct receptor transcripts in human cells. | Kang, Byong H; Jensen, Karin J; Hatch, Jaime A; Janes, Kevin A | Science signaling. | 23921087 | 2013 Aug 6; |
| Disruptive by design: a perspective on engineering in analytical chemistry. | Herr, Amy E | Analytical chemistry | 23924345 | 2013 Aug 20 |
| H4K20 methylation regulates quiescence and chromatin compaction. | Evertts, Adam G; Manning, Amity L; Wang, Xin; Dyson, Nicholas J; Garcia, Benjamin A; Coller, Hilary A | Molecular biology of the cell | 23924899 | 2013 Oct |
| Modeling lung deformation: a combined deformable image registration method with spatially varying Young's modulus estimates. | Li, Min; Castillo, Edward; Zheng, Xiao-Lin; Luo, Hong-Yan; Castillo, Richard; Wu, Yi; Guerrero, Thomas | Medical physics | 23927316 | 2013 Aug |
| Molecular simulations of aromatase reveal new insights into the mechanism of ligand binding. | Park, Jiho; Czapla, Luke; Amaro, Rommie E | Journal of chemical information and modeling | 23927370 | 2013 Aug 26 |
| A reconfigurable plasmofluidic lens. | Zhao, Chenglong; Liu, Yongmin; Zhao, Yanhui; Fang, Nicholas; Huang, Tony Jun | Nature communications | 23929463 | 2013 |
| Bacteria-surface interactions. | Tuson, Hannah H; Weibel, Douglas B | Soft matter | 23930134 | 2013 May 14 |
| In vivo time-gated fluorescence imaging with biodegradable luminescent porous silicon nanoparticles. | Gu, Luo; Hall, David J; Qin, Zhengtao; Anglin, Emily; Joo, Jinmyoung; Mooney, David J; Howell, Stephen B; Sailor, Michael J | Nature communications | 23933660 | 2013 |
| Diverse functions for six glycosyltransferases in Caulobacter crescentus cell wall assembly. | Yakhnina, Anastasiya A; Gitai, Zemer | Journal of bacteriology | 23935048 | 2013 Oct |
| A Ruler Protein in a Complex for Antiviral Defense Determines the Length of Small Interfering CRISPR RNAs. | Hatoum-Aslan, Asma; Samai, Poulami; Maniv, Inbal; Jiang, Wenyan; Marraffini, Luciano A | The Journal of biological chemistry | 23935102 | 2013 Sep 27 |
| A Biochip with a 3D microfluidic architecture for trapping white blood cells. | Tripathi, Anurag; Riddell 4th, James; Chronis, Nikos | Sensors and actuators. B, Chemical | 23935241 | 2013 Sep 1 |
| A 3-dimensional trimeric ýý-barrel model for Chlamydia MOMP contains conserved and novel elements of Gram-negative bacterial porins. | Feher, Victoria A; Randall, Arlo; Baldi, Pierre; Bush, Robin M; de la Maza, Luis M; Amaro, Rommie E | PloS one | 23935908 | 2013 |
| 3D graphene oxide-encapsulated gold nanoparticles to detect neural stem cell differentiation. | Kim, Tae-Hyung; Lee, Ki-Bum; Choi, Jeong-Woo | Biomaterials. | 23937915 | 2013 Nov; |
| The Local Dinucleotide Preference of APOBEC3G Can Be Altered from 5'-CC to 5'-TC by a Single Amino Acid Substitution. | Rathore, Anurag; Carpenter, Michael A; Demir, Ozlem; Ikeda, Terumasa; Li, Ming; Shaban, Nadine M; Law, Emily K; Anokhin, Dmitry; Brown, William L; Amaro, Rommie E; Harris, Reuben S | Journal of molecular biology | 23938202 | 2013 Aug 11 |
| Srs2 prevents Rad51 filament formation by repetitive motion on DNA. | Qiu, Yupeng; Antony, Edwin; Doganay, Sultan; Koh, Hye Ran; Lohman, Timothy M; Myong, Sua | Nature communications. | 23939144 | 2013; |
| Smart-phone based computational microscopy using multi-frame contact imaging on a fiber-optic array. | Navruz, Isa; Coskun, Ahmet F; Wong, Justin; Mohammad, Saqib; Tseng, Derek; Nagi, Richie; Phillips, Stephen; Ozcan, Aydogan | Lab on a chip | 23939637 | 2013 Oct 21 |
| Analysis of the proteolysis of bioactive peptides using a peptidomics approach. | Kim, Yun-Gon; Lone, Anna Mari; Saghatelian, Alan | Nature protocols | 23949379 | 2013 Sep |
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| Nutritional control of epigenetic processes in yeast and human cells. | Sadhu, Meru J; Guan, Qiaoning; Li, Fei; Sales-Lee, Jade; Iavarone, Anthony T; Hammond, Ming C; Cande, W Zacheus; Rine, Jasper | Genetics | 23979574 | 2013 Nov |
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| H3R42me2a is a histone modification with positive transcriptional effects. | Casadio, Fabio; Lu, Xiangdong; Pollock, Samuel B; LeRoy, Gary; Garcia, Benjamin A; Muir, Tom W; Roeder, Robert G; Allis, C David | Proceedings of the National Academy of Sciences of the United States of America | 23980157 | 2013 Sep 10 |
| Centromeric motion facilitates the mobility of interphase genomic regions in fission yeast. | Kim, Kyoung-Dong; Tanizawa, Hideki; Iwasaki, Osamu; Corcoran, Christopher J; Capizzi, Joseph R; Hayden, James E; Noma, Ken-Ichi | Journal of cell science | 23986481 | 2013 Nov 15 |
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| Poly(iohexol) nanoparticles as contrast agents for in vivo X-ray computed tomography imaging. | Yin, Qian; Yap, Felix Y; Yin, Lichen; Ma, Liang; Zhou, Qin; Dobrucki, Lawrence W; Fan, Timothy M; Gaba, Ron C; Cheng, Jianjun | Journal of the American Chemical Society | 23987119 | 2013 Sep 18 |
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| The use of contact heat evoked potential stimulator (CHEPS) in magnetoencephalography for pain research. | Gopalakrishnan, Raghavan; Machado, Andre G; Burgess, Richard C; Mosher, John C | Journal of neuroscience methods | 23994044 | 2013 Oct 30 |
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| Albumin testing in urine using a smart-phone. | Coskun, Ahmet F; Nagi, Richie; Sadeghi, Kayvon; Phillips, Stephen; Ozcan, Aydogan | Lab on a chip | 23995895 | 2013 Nov 7 |
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| Developmental timing of the effects of maternal care on gene expression and epigenetic regulation of hormone receptor levels in female rats. | Pena, Catherine Jensen; Neugut, Y Dana; Champagne, Frances A | Endocrinology | 24002038 | 2013 Nov |
| Redox-responsive, core-cross-linked micelles capable of on-demand, concurrent drug release and structure disassembly. | Wang, Hua; Tang, Li; Tu, Chunlai; Song, Ziyuan; Yin, Qian; Yin, Lichen; Zhang, Zhonghai; Cheng, Jianjun | Biomacromolecules | 24003893 | 2013 Oct 14 |
| Long-gradient separations coupled with selected reaction monitoring for highly sensitive, large scale targeted protein quantification in a single analysis. | Shi, Tujin; Fillmore, Thomas L; Gao, Yuqian; Zhao, Rui; He, Jintang; Schepmoes, Athena A; Nicora, Carrie D; Wu, Chaochao; Chambers, Justin L; Moore, Ronald J; Kagan, Jacob; Srivastava, Sudhir; Liu, Alvin Y; Rodland, Karin D; Liu, Tao; Camp 2nd, David G; S | Analytical chemistry | 24004026 | 2013 Oct 1 |
| Rapid, label-free detection of brain tumors with stimulated Raman scattering microscopy. | Ji, Minbiao; Orringer, Daniel A; Freudiger, Christian W; Ramkissoon, Shakti; Liu, Xiaohui; Lau, Darryl; Golby, Alexandra J; Norton, Isaiah; Hayashi, Marika; Agar, Nathalie Y R; Young, Geoffrey S; Spino, Cathie; Santagata, Sandro; Camelo-Piragua, Sandra; L | Science translational medicine | 24005159 | 2013 Sep 4 |
| Identifying multiple causative genes at a single GWAS locus. | Flister, Michael J; Tsaih, Shirng-Wern; O'Meara, Caitlin C; Endres, Bradley; Hoffman, Matthew J; Geurts, Aron M; Dwinell, Melinda R; Lazar, Jozef; Jacob, Howard J; Moreno, Carol | Genome research | 24006081 | 2013 Sep 4 |
| Spatiotemporal cellular imaging of polymer-pDNA nanocomplexes affords in situ morphology and trafficking trends. | Ingle, Nilesh P; Xue, Lian; Reineke, Theresa M | Molecular pharmaceutics | 24007201 | 2013 Nov 4 |
| From molecules to mastication: the development and evolution of teeth. | Jheon, Andrew H; Seidel, Kerstin; Biehs, Brian; Klein, Ophir D | Wiley interdisciplinary reviews. Developmental biology | 24009032 | 2013 Mar |
| Expanding the fluorine chemistry of living systems using engineered polyketide synthase pathways. | Walker, Mark C; Thuronyi, Benjamin W; Charkoudian, Louise K; Lowry, Brian; Khosla, Chaitan; Chang, Michelle C Y | Science (New York, N.Y.) | 24009388 | 2013 Sep 6 |
| Stromal matrix metalloprotease-13 knockout alters Collagen I structure at the tumor-host interface and increases lung metastasis of C57BL/6 syngeneic E0771 mammary tumor cells. | Perry, Seth W; Schueckler, Jill M; Burke, Kathleen; Arcuri, Giuseppe L; Brown, Edward B | BMC cancer | 24010522 | 2013 |
| Longitudinal, quantitative monitoring of therapeutic response in 3D in vitro tumor models with OCT for high-content therapeutic screening. | Klein, O J; Jung, Y K; Evans, C L | Methods (San Diego, Calif.) | 24013042 | 2013 Sep 3 |
| DNA-directed self-assembly of shape-controlled hydrogels. | Qi, Hao; Ghodousi, Majid; Du, Yanan; Grun, Casey; Bae, Hojae; Yin, Peng; Khademhosseini, Ali | Nature communications | 24013352 | 2013 Sep 9 |
| Kidney organogenesis in the zebrafish: insights into vertebrate nephrogenesis and regeneration. | Gerlach, Gary F; Wingert, Rebecca A | Wiley interdisciplinary reviews. Developmental biology | 24014448 | 2013 Sep |
| Structural and functional characterization of the N terminus of Schizosaccharomyces pombe Cwf10. | Livesay, S Brent; Collier, Scott E; Bitton, Danny A; Bahler, Jurg; Ohi, Melanie D | Eukaryotic cell | 24014766 | 2013 Nov |
| Polymerization of Protecting-Group-Free Peptides via ROMP. | Kammeyer, Jacquelin K; Blum, Angela P; Adamiak, Lisa; Hahn, Michael E; Gianneschi, Nathan C | Polymer chemistry | 24015154 | 2013 |
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| Burst suppression probability algorithms: state-space methods for tracking EEG burst suppression. | Chemali, Jessica; Ching, Shinung; Purdon, Patrick L; Solt, Ken; Brown, Emery N | Journal of neural engineering | 24018288 | 2013 Oct |
| Isolevuglandin-modified phosphatidylethanolamine is metabolized by NAPE-hydrolyzing phospholipase D. | Guo, Lilu; Gragg, Stephen D; Chen, Zhongyi; Zhang, Yongqin; Amarnath, Venkataraman; Davies, Sean S | Journal of lipid research | 24018423 | 2013 Nov |
| Expanding the Library and Substrate Diversity of the Pyrrolysyl-tRNA Synthetase to Incorporate Unnatural Amino Acids Containing Conjugated Rings. | Lacey, Vanessa K; Louie, Gordon V; Noel, Joseph P; Wang, Lei | Chembiochem : a European journal of chemical biology | 24019075 | 2013 Nov 4 |
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| Zebrafish cardiac injury and regeneration models: a noninvasive and invasive in vivo model of cardiac regeneration. | Dickover, Michael S; Zhang, Ruilin; Han, Peidong; Chi, Neil C | Methods in molecular biology (Clifton, N.J.) | 24029953 | 2013 |
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| Long-range chromatin contacts in embryonic stem cells reveal a role for pluripotency factors and polycomb proteins in genome organization. | Denholtz, Matthew; Bonora, Giancarlo; Chronis, Constantinos; Splinter, Erik; de Laat, Wouter; Ernst, Jason; Pellegrini, Matteo; Plath, Kathrin | Cell stem cell | 24035354 | 2013 Nov 7 |
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| The role of hydrolases in bacterial cell-wall growth. | Lee, Timothy K; Huang, Kerwyn Casey | Current opinion in microbiology | 24035761 | 2013 Dec |
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| Inhibitors of SCF-Skp2/Cks1 E3 ligase block estrogen-induced growth stimulation and degradation of nuclear p27kip1: therapeutic potential for endometrial cancer. | Pavlides, Savvas C; Huang, Kuang-Tzu; Reid, Dylan A; Wu, Lily; Blank, Stephanie V; Mittal, Khushbakhat; Guo, Lankai; Rothenberg, Eli; Rueda, Bo; Cardozo, Timothy; Gold, Leslie I | Endocrinology | 24035998 | 2013 Nov |
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| Hsp104 suppresses polyglutamine-induced degeneration post onset in a drosophila MJD/SCA3 model. | Cushman-Nick, Mimi; Bonini, Nancy M; Shorter, James | PLoS genetics | 24039611 | 2013 Sep |
| Power Doppler ultrasound phenotyping of expanding versus collapsed popliteal lymph nodes in murine inflammatory arthritis. | Bouta, Echoe M; Ju, Yawen; Rahimi, Homaira; de Mesy-Bentley, Karen L; Wood, Ronald W; Xing, Lianping; Schwarz, Edward M | PloS one | 24040061 | 2013 |
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| Thioridazine pharmacokinetic-pharmacodynamic parameters "Wobble" during treatment of tuberculosis: a theoretical basis for shorter-duration curative monotherapy with congeners. | Musuka, Sandirai; Srivastava, Shashikant; Siyambalapitiyage Dona, Chandima Wasana; Meek, Claudia; Leff, Richard; Pasipanodya, Jotam; Gumbo, Tawanda | Antimicrobial agents and chemotherapy | 24041886 | 2013 Dec |
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| Counting molecules in single organelles with superresolution microscopy allows tracking of the endosome maturation trajectory. | Puchner, Elias M; Walter, Jessica M; Kasper, Robert; Huang, Bo; Lim, Wendell A | Proceedings of the National Academy of Sciences of the United States of America | 24043832 | 2013 Oct 1 |
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| A Subspace Pursuit-based Iterative Greedy Hierarchical solution to the neuromagnetic inverse problem. | Babadi, Behtash; Obregon-Henao, Gabriel; Lamus, Camilo; Hamalainen, Matti S; Brown, Emery N; Purdon, Patrick L | NeuroImage | 24055554 | 2013 Sep 18 |
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| A co-culture device with a tunable stiffness to understand combinatorial cell-cell and cell-matrix interactions. | Rao, Nikhil; Grover, Gregory N; Vincent, Ludovic G; Evans, Samantha C; Choi, Yu Suk; Spencer, Katrina H; Hui, Elliot E; Engler, Adam J; Christman, Karen L | Integrative biology : quantitative biosciences from nano to macro | 24061208 | 2013 Nov |
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| A phase I study using bortezomib with weekly idarubicin for treatment of elderly patients with acute myeloid leukemia. | Howard, Dianna S; Liesveld, Jane; Phillips 2nd, Gordon L; Hayslip, John; Weiss, Heidi; Jordan, Craig T; Guzman, Monica L | Leukemia research. | 24075534 | 2013 Nov; |
| Disruption of helix-capping residues 671 and 674 reveals a role in HIV-1 entry for a specialized hinge segment of the membrane proximal external region of gp41. | Sun, Zhen-Yu J; Cheng, Yuxing; Kim, Mikyung; Song, Likai; Choi, Jaewon; Kudahl, Ulrich J; Brusic, Vladimir; Chowdhury, Barnali; Yu, Lu; Seaman, Michael S; Bellot, Gaetan; Shih, William M; Wagner, Gerhard; Reinherz, Ellis L | Journal of molecular biology | 24075869 | 2014 Mar 6 |
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| Giga-pixel fluorescent imaging over an ultra-large field-of-view using a flatbed scanner. | Gorocs, Zoltan; Ling, Yuye; Yu, Meng Dai; Karahalios, Dimitri; Mogharabi, Kian; Lu, Kenny; Wei, Qingshan; Ozcan, Aydogan | Lab on a chip | 24080766 | 2013 Nov 21 |
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| International consensus criteria for the diagnosis of Raynaud's phenomenon. | Maverakis, Emanual; Patel, Forum; Kronenberg, Daniel G; Chung, Lorinda; Fiorentino, David; Allanore, Yannick; Guiducci, Serena; Hesselstrand, Roger; Hummers, Laura K; Duong, Chris; Kahaleh, Bashar; Macgregor, Alexander; Matucci-Cerinic, Marco; Wollheim, F | Journal of autoimmunity | 24491823 | 2014 Feb-Mar |
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| Award winner for outstanding research in the PhD category, 2014 Society for Biomaterials annual meeting and exposition, Denver, Colorado, April 16-19, 2014: Decellularized adipose matrix hydrogels stimulate in vivo neovascularization and adipose formation | Adam Young, D; Bajaj, Vaibhav; Christman, Karen L | Journal of biomedical materials research. Part A | 24510423 | 2014 Jun |
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| Geographical heterogeneity of multidrug-resistant tuberculosis in Georgia, January 2009 to June 2011. | Jenkins, H E; Gegia, M; Furin, J; Kalandadze, I; Nanava, U; Chakhaia, T; Cohen, T | Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin | 24679722 | 2014 |
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| Comprehensive evaluation of peripheral nerve regeneration in the acute healing phase using tissue clearing and optical microscopy in a rodent model. | Jung, Yookyung; Ng, Joanna H; Keating, Cameron P; Senthil-Kumar, Prabhu; Zhao, Jie; Randolph, Mark A; Winograd, Jonathan M; Evans, Conor L | PloS one | 24714405 | 2014 |
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| Near-infrared-induced heating of confined water in polymeric particles for efficient payload release. | Viger, Mathieu L; Sheng, Wangzhong; Dore, Kim; Alhasan, Ali H; Carling, Carl-Johan; Lux, Jacques; de Gracia Lux, Caroline; Grossman, Madeleine; Malinow, Roberto; Almutairi, Adah | ACS nano | 24717072 | 2014 May 27 |
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| Pro-atherogenic shear stress and HIV proteins synergistically upregulate cathepsin K in endothelial cells. | Parker, Ivana Kennedy; Roberts, Ladeidra Monet; Hansen, Laura; Gleason Jr, Rudolph L; Sutliff, Roy L; Platt, Manu O | Annals of biomedical engineering | 24719048 | 2014 Jun |
| Genome-wide family-based linkage analysis of exome chip variants and cardiometabolic risk. | Hellwege, Jacklyn N; Palmer, Nicholette D; Raffield, Laura M; Ng, Maggie C Y; Hawkins, Gregory A; Long, Jirong; Lorenzo, Carlos; Norris, Jill M; Ida Chen, Y-D; Speliotes, Elizabeth K; Rotter, Jerome I; Langefeld, Carl D; Wagenknecht, Lynne E; Bowden, Dona | Genetic epidemiology. | 24719370 | 2014 May; |
| Developmental self-assembly of a DNA tetrahedron. | Sadowski, John P; Calvert, Colby R; Zhang, David Yu; Pierce, Niles A; Yin, Peng | ACS nano | 24720462 | 2014 Apr 22 |
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| EGFRvIII-Specific Chimeric Antigen Receptor T Cells Migrate to and Kill Tumor Deposits Infiltrating the Brain Parenchyma in an Invasive Xenograft Model of Glioblastoma. | Miao, Hongsheng; Choi, Bryan D; Suryadevara, Carter M; Sanchez-Perez, Luis; Yang, Shicheng; De Leon, Gabriel; Sayour, Elias J; McLendon, Roger; Herndon 2nd, James E; Healy, Patrick; Archer, Gary E; Bigner, Darell D; Johnson, Laura A; Sampson, John H | PloS one | 24722266 | 2014 |
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| Comparison of 4-dimensional computed tomography ventilation with nuclear medicine ventilation-perfusion imaging: a clinical validation study. | Vinogradskiy, Yevgeniy; Koo, Phillip J; Castillo, Richard; Castillo, Edward; Guerrero, Thomas; Gaspar, Laurie E; Miften, Moyed; Kavanagh, Brian D | International journal of radiation oncology, biology, physics | 24725702 | 2014 May 1 |
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| CD209a expression on dendritic cells is critical for the development of pathogenic Th17 cell responses in murine schistosomiasis. | Ponichtera, Holly E; Shainheit, Mara G; Liu, Beiyun C; Raychowdhury, Raktima; Larkin, Bridget M; Russo, Joanne M; Salantes, D Brenda; Lai, Chao-Qiang; Parnell, Laurence D; Yun, Tae J; Cheong, Cheolho; Bunnell, Stephen C; Hacohen, Nir; Stadecker, Miguel J | Journal of immunology (Baltimore, Md. : 1950) | 24729611 | 2014 May 15 |
| One-pot Synthesis of Elastin-like Polypeptide Hydrogels with Grafted VEGF-Mimetic Peptides. | Cai, Lei; Dinh, Cong B; Heilshorn, Sarah C | Biomaterials science | 24729868 | 2014 May 1 |
| Administration of Antenatal Glucocorticoids and Postnatal Surfactant Ameliorates Respiratory Distress Syndrome-Associated Neonatal Lethality in Erk3 (-/-) Mouse Pups. | Cuevas Guaman, Milenka; Sbrana, Elena; Shope, Cynthia; Showalter, Lori; Hu, Min; Meloche, Sylvain; Aagaard, Kjersti | Pediatric research | 24732107 | 2014 Apr 14 |
| Reduced virulence of an extensively drug-resistant outbreak strain of Mycobacterium tuberculosis in a murine model. | Smith, Kristen L Jurcic; Saini, Divey; Bardarov, Svetoslav; Larsen, Michelle; Frothingham, Richard; Gandhi, Neel R; Jacobs Jr, William R; Sturm, A Willem; Lee, Sunhee | PloS one. | 24733050 | 2014; |
| Positive reinforcement mediated by midbrain dopamine neurons requires D1 and D2 receptor activation in the nucleus accumbens. | Steinberg, Elizabeth E; Boivin, Josiah R; Saunders, Benjamin T; Witten, Ilana B; Deisseroth, Karl; Janak, Patricia H | PloS one. | 24733061 | 2014; |
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| Stepwise recruitment of transcellular and paracellular pathways underlies blood-brain barrier breakdown in stroke. | Knowland, Daniel; Arac, Ahmet; Sekiguchi, Kohei J; Hsu, Martin; Lutz, Sarah E; Perrino, John; Steinberg, Gary K; Barres, Ben A; Nimmerjahn, Axel; Agalliu, Dritan | Neuron | 24746419 | 2014 May 7 |
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| Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development. | Bendall, Sean C; Davis, Kara L; Amir, El-Ad David; Tadmor, Michelle D; Simonds, Erin F; Chen, Tiffany J; Shenfeld, Daniel K; Nolan, Garry P; Pe'er, Dana | Cell | 24766814 | 2014 Apr 24 |
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| Regulatory interactions maintaining self-renewal of human embryonic stem cells as revealed through a systems analysis of PI3K/AKT pathway. | Mathew, Shibin; Sundararaj, Sankaramanivel; Mamiya, Hikaru; Banerjee, Ipsita | Bioinformatics (Oxford, England). | 24778109 | 2014 Aug 15; |
| Secondary structure of corona proteins determines the cell surface receptors used by nanoparticles. | Fleischer, Candace C; Payne, Christine K | The journal of physical chemistry. B. | 24779411 | 2014 Dec 11; |
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| Molecular-level functional magnetic resonance imaging of dopaminergic signaling. | Lee, Taekwan; Cai, Lili X; Lelyveld, Victor S; Hai, Aviad; Jasanoff, Alan | Science (New York, N.Y.) | 24786083 | 2014 May 2 |
| Conserved modular domains team up to latch-open active protein kinase C*. | Swanson, Carter J; Ritt, Michael; Wang, William; Lang, Michael J; Narayan, Arvind; Tesmer, John J; Westfall, Margaret; Sivaramakrishnan, Sivaraj | The Journal of biological chemistry. | 24790081 | 2014 Jun 20; |
| The microbiome, parturition, and timing of birth: more questions than answers. | Prince, Amanda L; Antony, Kathleen M; Chu, Derrick M; Aagaard, Kjersti M | Journal of reproductive immunology | 24793619 | 2014 Apr 18 |
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| Myeloid Glycosylation Defects Lead to a Spontaneous Common Variable Immunodeficiency-Like Condition with Associated Hemolytic Anemia and Antilymphocyte Autoimmunity. | Ryan, Sean O; Abbott, Derek W; Cobb, Brian A | Journal of immunology (Baltimore, Md. : 1950) | 24795453 | 2014 May 2 |
| Restoring systemic GDF11 levels reverses age-related dysfunction in mouse skeletal muscle. | Sinha, Manisha; Jang, Young C; Oh, Juhyun; Khong, Danika; Wu, Elizabeth Y; Manohar, Rohan; Miller, Christine; Regalado, Samuel G; Loffredo, Francesco S; Pancoast, James R; Hirshman, Michael F; Lebowitz, Jessica; Shadrach, Jennifer L; Cerletti, Massimilian | Science (New York, N.Y.) | 24797481 | 2014 May 9 |
| Vascular and neurogenic rejuvenation of the aging mouse brain by young systemic factors. | Katsimpardi, Lida; Litterman, Nadia K; Schein, Pamela A; Miller, Christine M; Loffredo, Francesco S; Wojtkiewicz, Gregory R; Chen, John W; Lee, Richard T; Wagers, Amy J; Rubin, Lee L | Science (New York, N.Y.) | 24797482 | 2014 May 9 |
| 3-D intestinal scaffolds for evaluating the therapeutic potential of probiotics. | Costello, Cait M; Sorna, Rachel M; Goh, Yih-Lin; Cengic, Ivana; Jain, Nina K; March, John C | Molecular pharmaceutics | 24798584 | 2014 Jul 7 |
| ECM protein nanofibers and nanostructures engineered using surface-initiated assembly. | Szymanski, John M; Jallerat, Quentin; Feinberg, Adam W | Journal of visualized experiments : JoVE. | 24799041 | 2014; |
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| Selection via pluripotency-related transcriptional screen minimizes the influence of somatic origin on iPSC differentiation propensity. | Hartjes, Katherine A; Li, Xing; Martinez-Fernandez, Almudena; Roemmich, Alexa J; Larsen, Brandon T; Terzic, Andre; Nelson, Timothy J | Stem cells (Dayton, Ohio) | 24802033 | 2014 May 6 |
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| Acquired resistance of EGFR-mutant lung adenocarcinomas to afatinib plus cetuximab is associated with activation of mTORC1. | Pirazzoli, Valentina; Nebhan, Caroline; Song, Xiaoling; Wurtz, Anna; Walther, Zenta; Cai, Guoping; Zhao, Zhongming; Jia, Peilin; de Stanchina, Elisa; Shapiro, Erik M; Gale, Molly; Yin, Ruonan; Horn, Leora; Carbone, David P; Stephens, Philip J; Miller, Vin | Cell reports | 24813888 | 2014 May 22 |
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| Telomeric Overhang Length Determines Structural Dynamics and Accessibility to Telomerase and ALT-Associated Proteins. | Hwang, Helen; Kreig, Alex; Calvert, Jacob; Lormand, Justin; Kwon, Yongho; Daley, James M; Sung, Patrick; Opresko, Patricia L; Myong, Sua | Structure (London, England : 1993) | 24836024 | 2014 Jun 10 |
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| Putative hydrogen bond to tyrosine M208 in photosynthetic reaction centers from Rhodobacter capsulatus significantly slows primary charge separation. | Saggu, Miguel; Carter, Brett; Zhou, Xiaoxue; Faries, Kaitlyn; Cegelski, Lynette; Holten, Dewey; Boxer, Steven G; Kirmaier, Christine | The journal of physical chemistry. B | 24902471 | 2014 Jun 19 |
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| CD19-antigen specific nanoscale liposomal formulation of a SYK P-site inhibitor causes apoptotic destruction of human B-precursor leukemia cells. | Myers, Dorothea E; Yiv, Seang; Qazi, Sanjive; Ma, Hong; Cely, Ingrid; Shahidzadeh, Anoush; Arellano, Martha; Finestone, Erin; Gaynon, Paul S; Termuhlen, Amanda; Cheng, Jianjun; Uckun, Fatih M | Integrative biology : quantitative biosciences from nano to macro | 24910947 | 2014 Aug |
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| MORC1 represses transposable elements in the mouse male germline. | Pastor, William A; Stroud, Hume; Nee, Kevin; Liu, Wanlu; Pezic, Dubravka; Manakov, Sergei; Lee, Serena A; Moissiard, Guillaume; Zamudio, Natasha; Bourc'his, Deborah; Aravin, Alexei A; Clark, Amander T; Jacobsen, Steven E | Nature communications. | 25503965 | 2014; |
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| The Bordetella adenylate cyclase repeat-in-toxin (RTX) domain is immunodominant and elicits neutralizing antibodies. | Wang, Xianzhe; Maynard, Jennifer A | The Journal of biological chemistry. | 25505186 | 2015 Feb 6; |
| Live imaging of endogenous PSD-95 using ENABLED: a conditional strategy to fluorescently label endogenous proteins. | Fortin, Dale A; Tillo, Shane E; Yang, Guang; Rah, Jong-Cheol; Melander, Joshua B; Bai, Suxia; Soler-Cedeno, Omar; Qin, Maozhen; Zemelman, Boris V; Guo, Caiying; Mao, Tianyi; Zhong, Haining | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 25505322 | 2014 Dec 10; |
| Quantitative Analysis of Robustness of Dynamic Response and Signal Transfer in Insulin mediated PI3K/AKT Pathway. | Mathew, Shibin; Banerjee, Ipsita | Computers & chemical engineering. | 25506104 | 2014 Dec 4; |
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| Method for the quantitative measurement of collecting lymphatic vessel contraction in mice. | Liao, Shan; Jones, Dennis; Cheng, Gang; Padera, Timothy P | Journal of biological methods. | 25512945 | 2014; |
| Correlation of outer nuclear layer thickness with cone density values in patients with retinitis pigmentosa and healthy subjects. | Menghini, Moreno; Lujan, Brandon J; Zayit-Soudry, Shiri; Syed, Reema; Porco, Travis C; Bayabo, Kristine; Carroll, Joseph; Roorda, Austin; Duncan, Jacque L | Investigative ophthalmology & visual science. | 25515570 | 2014 Dec 16; |
| Kinetic pathway of 40S ribosomal subunit recruitment to hepatitis C virus internal ribosome entry site. | Fuchs, Gabriele; Petrov, Alexey N; Marceau, Caleb D; Popov, Lauren M; Chen, Jin; O'Leary, Seán E; Wang, Richard; Carette, Jan E; Sarnow, Peter; Puglisi, Joseph D | Proceedings of the National Academy of Sciences of the United States of America. | 25516984 | 2015 Jan 13; |
| Sensitive targeted quantification of ERK phosphorylation dynamics and stoichiometry in human cells without affinity enrichment. | Shi, Tujin; Gao, Yuqian; Gaffrey, Matthew J; Nicora, Carrie D; Fillmore, Thomas L; Chrisler, William B; Gritsenko, Marina A; Wu, Chaochao; He, Jintang; Bloodsworth, Kent J; Zhao, Rui; Camp 2nd, David G; Liu, Tao; Rodland, Karin D; Smith, Richard D; Wiley, | Analytical chemistry. | 25517423 | 2015 Jan 20; |
| Knockdown of the cell cycle inhibitor p21 enhances cartilage formation by induced pluripotent stem cells. | Diekman, Brian O; Thakore, Pratiksha I; O'Connor, Shannon K; Willard, Vincent P; Brunger, Jonathan M; Christoforou, Nicolas; Leong, Kam W; Gersbach, Charles A; Guilak, Farshid | Tissue engineering. Part A. | 25517798 | 2015 Apr; |
| An AUTS2-Polycomb complex activates gene expression in the CNS. | Gao, Zhonghua; Lee, Pedro; Stafford, James M; von Schimmelmann, Melanie; Schaefer, Anne; Reinberg, Danny | Nature. | 25519132 | 2014 Dec 18; |
| Machine-learning techniques applied to antibacterial drug discovery. | Durrant, Jacob D; Amaro, Rommie E | Chemical biology & drug design. | 25521642 | 2015 Jan; |
| Cross-sectional and longitudinal effects of racism on mental health among residents of Black neighborhoods in New York City. | Kwate, Naa Oyo A; Goodman, Melody S | American journal of public health. | 25521873 | 2015 Apr; |
| Minimizing antibody surface density on liposomes while sustaining cytokine-activated EC targeting. | Almeda, Dariela; Wang, Biran; Auguste, Debra T | Biomaterials. | 25522963 | 2015 Feb; |
| Follow-up Care Education and Information: Identifying Cancer Survivors in Need of More Guidance. | O'Malley, Denalee M; Hudson, Shawna V; Ohman-Strickland, Pamela A; Bator, Alicja; Lee, Heather S; Gundersen, Daniel A; Miller, Suzanne M | Journal of cancer education : the official journal of the American Association for Cancer Education. | 25524391 | 2014 Dec 20; |
| Adenovirus small E1A employs the lysine acetylases p300/CBP and tumor suppressor Rb to repress select host genes and promote productive virus infection. | Ferrari, Roberto; Gou, Dawei; Jawdekar, Gauri; Johnson, Sarah A; Nava, Miguel; Su, Trent; Yousef, Ahmed F; Zemke, Nathan R; Pellegrini, Matteo; Kurdistani, Siavash K; Berk, Arnold J | Cell host & microbe. | 25525796 | 2014 Nov 12; |
| X chromosome reactivation dynamics reveal stages of reprogramming to pluripotency. | Pasque, Vincent; Tchieu, Jason; Karnik, Rahul; Uyeda, Molly; Sadhu Dimashkie, Anupama; Case, Dana; Papp, Bernadett; Bonora, Giancarlo; Patel, Sanjeet; Ho, Ritchie; Schmidt, Ryan; McKee, Robin; Sado, Takashi; Tada, Takashi; Meissner, Alexander; Plath, Kath | Cell. | 25525883 | 2014 Dec 18; |
| Gut symbionts from distinct hosts exhibit genotoxic activity via divergent colibactin biosynthesis pathways. | Engel, Philipp; Vizcaino, Maria I; Crawford, Jason M | Applied and environmental microbiology. | 25527542 | 2015 Feb; |
| Optogenetic control of intracellular signaling pathways. | Zhang, Kai; Cui, Bianxiao | Trends in biotechnology. | 25529484 | 2015 Feb; |
| Shrink Wrapping Cells in a Defined Extracellular Matrix to Modulate the Chemo-Mechanical Microenvironment. | Palchesko, Rachelle N; Szymanski, John M; Sahu, Amrita; Feinberg, Adam W | Cellular and molecular bioengineering. | 25530816 | 2014 Sep; |
| Reducing X-Ray Induced Oxidative Damages in Fibroblasts with Graphene Oxide. | Qiao, Yong; Zhang, Peipei; Wang, Chaoming; Ma, Liyuan; Su, Ming | Nanomaterials (Basel, Switzerland). | 25530873 | 2014; |
| Inactivation of multiple bacterial histidine kinases by targeting the ATP-binding domain. | Wilke, Kaelyn E; Francis, Samson; Carlson, Erin E | ACS chemical biology. | 25531939 | 2015 Jan 16; |
| Group 2 innate lymphoid cells promote beiging of white adipose tissue and limit obesity. | Brestoff, Jonathan R; Kim, Brian S; Saenz, Steven A; Stine, Rachel R; Monticelli, Laurel A; Sonnenberg, Gregory F; Thome, Joseph J; Farber, Donna L; Lutfy, Kabirullah; Seale, Patrick; Artis, David | Nature. | 25533952 | 2015 Mar 12; |
| Involvement of Holliday junction resolvase in fluoroquinolone-mediated killing of Mycobacterium smegmatis. | Long, Quanxin; Du, Qinglin; Fu, Tiwei; Drlica, Karl; Zhao, Xilin; Xie, Jianping | Antimicrobial agents and chemotherapy. | 25534729 | 2015 Mar; |
| Controlling cell-cell interactions using surface acoustic waves. | Guo, Feng; Li, Peng; French, Jarrod B; Mao, Zhangming; Zhao, Hong; Li, Sixing; Nama, Nitesh; Fick, James R; Benkovic, Stephen J; Huang, Tony Jun | Proceedings of the National Academy of Sciences of the United States of America. | 25535339 | 2015 Jan 6; |
| A cell-ECM screening method to predict breast cancer metastasis. | Barney, L E; Dandley, E C; Jansen, L E; Reich, N G; Mercurio, A M; Peyton, S R | Integrative biology : quantitative biosciences from nano to macro. | 25537447 | 2015 Feb; |
| Flexible and stretchable micromagnet arrays for tunable biointerfacing. | Tseng, Peter; Lin, Jonathan; Owsley, Keegan; Kong, Janay; Kunze, Anja; Murray, Coleman; Di Carlo, Dino | Advanced materials (Deerfield Beach, Fla.). | 25537971 | 2015 Feb; |
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| Impaired myogenic response and autoregulation of cerebral blood flow is rescued in CYP4A1 transgenic Dahl salt-sensitive rat. | Fan, Fan; Geurts, Aron M; Murphy, Sydney R; Pabbidi, Mallikarjuna R; Jacob, Howard J; Roman, Richard J | American journal of physiology. Regulatory, integrative and comparative physiology. | 25540098 | 2015 Mar 1; |
| Polysaccharide A from the capsule of Bacteroides fragilis induces clonal CD4+ T cell expansion. | Johnson, Jenny L; Jones, Mark B; Cobb, Brian A | The Journal of biological chemistry. | 25540199 | 2015 Feb 20; |
| Mesolimbic dopamine dynamically tracks, and is causally linked to, discrete aspects of value-based decision making. | Saddoris, Michael P; Sugam, Jonathan A; Stuber, Garret D; Witten, Ilana B; Deisseroth, Karl; Carelli, Regina M | Biological psychiatry. | 25541492 | 2015 May 15; |
| Nephron proximal tubule patterning and corpuscles of Stannius formation are regulated by the sim1a transcription factor and retinoic acid in zebrafish. | Cheng, Christina N; Wingert, Rebecca A | Developmental biology. | 25542995 | 2015 Mar 1; |
| Substoichiometric hydroxynonenylation of a single protein recapitulates whole-cell-stimulated antioxidant response. | Parvez, Saba; Fu, Yuan; Li, Jiayang; Long, Marcus J C; Lin, Hong-Yu; Lee, Dustin K; Hu, Gene S; Aye, Yimon | Journal of the American Chemical Society. | 25544059 | 2015 Jan 14; |
| U0126 protects cells against oxidative stress independent of its function as a MEK inhibitor. | Ong, Qunxiang; Guo, Shunling; Zhang, Kai; Cui, Bianxiao | ACS chemical neuroscience. | 25544156 | 2015 Jan 21; |
| Validation of gene expression biomarker analysis for biopsy-based clinical trials in Crohn's disease. | Boland, Brigid S; Boyle, David L; Sandborn, William J; Firestein, Gary S; Levesque, Barrett G; Hillman, Joshua; Zhang, Bing; Proudfoot, James; Eckmann, Lars; Ernst, Peter B; Rivera-Nieves, Jesus; Pola, Suresh; Copur-Dahi, Nedret; Zou, Guangyong; Chang, Jo | Inflammatory bowel diseases. | 25545378 | 2015 Feb; |
| Nanogels from metal-chelating crosslinkers as versatile platforms applied to copper-64 PET imaging of tumors and metastases. | Lux, Jacques; White, Alexander G; Chan, Minnie; Anderson, Carolyn J; Almutairi, Adah | Theranostics. | 25553115 | 2015; |
| Cascaded spiral microfluidic device for deterministic and high purity continuous separation of circulating tumor cells. | Kim, Tae Hyun; Yoon, Hyeun Joong; Stella, Philip; Nagrath, Sunitha | Biomicrofluidics. | 25553193 | 2014 Nov; |
| Magnitude and sources of bias in the detection of mixed strain M. tuberculosis infection. | Plazzotta, Giacomo; Cohen, Ted; Colijn, Caroline | Journal of theoretical biology. | 25553967 | 2015 Mar 07; |
| Loss of MXD3 induces apoptosis of Reh human precursor B acute lymphoblastic leukemia cells. | Barisone, Gustavo A; Satake, Noriko; Lewis, Carly; Duong, Connie; Chen, Cathy; Lam, Kit S; Nolta, Jan; D?az, Elva | Blood cells, molecules & diseases. | 25554682 | 2015 Apr; |
| SIMULTANEOUS CONTROL OF AN ANKLE-FOOT PROSTHESIS MODEL USING A VIRTUAL CONSTRAINT. | Nanjangud, Akshay; Gregg, Robert D | Proceedings of the ASME Dynamic Systems and Control Conference. ASME Dynamic Systems and Control Conference. | 25554734 | 2014 Oct; |
| Protein synthesis. Rqc2p and 60S ribosomal subunits mediate mRNA-independent elongation of nascent chains. | Shen, Peter S; Park, Joseph; Qin, Yidan; Li, Xueming; Parsawar, Krishna; Larson, Matthew H; Cox, James; Cheng, Yifan; Lambowitz, Alan M; Weissman, Jonathan S; Brandman, Onn; Frost, Adam | Science (New York, N.Y.). | 25554787 | 2015 Jan 2; |
| A virtual screening approach for identifying plants with anti H5N1 neuraminidase activity. | Ikram, Nur Kusaira Khairul; Durrant, Jacob D; Muchtaridi, Muchtaridi; Zalaludin, Ayunni Salihah; Purwitasari, Neny; Mohamed, Nornisah; Rahim, Aisyah Saad Abdul; Lam, Chan Kit; Normi, Yahaya M; Rahman, Noorsaadah Abd; Amaro, Rommie E; Wahab, Habibah A | Journal of chemical information and modeling | 25555059 | 2015 Feb 23 |
| Visualization of lncRNA by single-molecule fluorescence in situ hybridization. | Dunagin, Margaret; Cabili, Moran N; Rinn, John; Raj, Arjun | Methods in molecular biology (Clifton, N.J.). | 25555572 | 2015; |
| DeCoN: genome-wide analysis of in vivo transcriptional dynamics during pyramidal neuron fate selection in neocortex. | Molyneaux, Bradley J; Goff, Loyal A; Brettler, Andrea C; Chen, Hsu-Hsin; Brown, Juliana R; Hrvatin, Sini?a; Rinn, John L; Arlotta, Paola | Neuron. | 25556833 | 2015 Jan 21; |
| The preterm placental microbiome varies in association with excess maternal gestational weight gain. | Antony, Kathleen M; Ma, Jun; Mitchell, Kristen B; Racusin, Diana A; Versalovic, James; Aagaard, Kjersti | American journal of obstetrics and gynecology. | 25557210 | 2015 May; |
| Synthesis, anticancer activity and molecular docking studies on a series of heterocyclic trans-cyanocombretastatin analogues as antitubulin agents. | Penthala, Narsimha Reddy; Zong, Hongliang; Ketkar, Amit; Madadi, Nikhil Reddy; Janganati, Venumadav; Eoff, Robert L; Guzman, Monica L; Crooks, Peter A | European journal of medicinal chemistry. | 25557492 | 2015 Mar 6; |
| Virtual Constraint Control of a Powered Prosthetic Leg: From Simulation to Experiments with Transfemoral Amputees. | Gregg, Robert D; Lenzi, Tommaso; Hargrove, Levi J; Sensinger, Jonathon W | IEEE transactions on robotics : a publication of the IEEE Robotics and Automation Society. | 25558185 | 2014 Dec; |
| Altered iPSC-derived neurons' sodium channel properties in subjects with Monge's disease. | Zhao, H W; Gu, X Q; Chailangkarn, T; Perkins, G; Callacondo, D; Appenzeller, O; Poulsen, O; Zhou, D; Muotri, A R; Haddad, G G | Neuroscience. | 25559931 | 2015 Mar 12; |
| Imaging complex protein metabolism in live organisms by stimulated Raman scattering microscopy with isotope labeling. | Wei, Lu; Shen, Yihui; Xu, Fang; Hu, Fanghao; Harrington, Jamie K; Targoff, Kimara L; Min, Wei | ACS chemical biology. | 25560305 | 2015 Mar 20; |
| Imaging chemical neurotransmission with genetically encoded fluorescent sensors. | Liang, Ruqiang; Broussard, Gerard Joseph; Tian, Lin | ACS chemical neuroscience. | 25565280 | 2015 Jan 21; |
| A mechanism of leading-edge protrusion in the absence of Arp2/3 complex. | Suraneni, Praveen; Fogelson, Ben; Rubinstein, Boris; Noguera, Philippe; Volkmann, Niels; Hanein, Dorit; Mogilner, Alex; Li, Rong | Molecular biology of the cell. | 25568333 | 2015 Mar 1; |
| The expanding epigenetic landscape of non-model organisms. | Bonasio, Roberto | The Journal of experimental biology. | 25568458 | 2015 Jan 01; |
| Efficient ribcage segmentation from CT scans using shape features. | Xu, Ziyue; Bagci, Ulas; Jonsson, Colleen; Jain, Sanjay; Mollura, Daniel J | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 25570597 | 2014; |
| An automated 3D registration method for optical coherence tomography volumes. | Gan, Yu; Yao, Wang; Myers, Kristin M; Hendon, Christine P | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 25570837 | 2014; |
| A survey of phase variable candidates of human locomotion. | Villarreal, Dario J; Gregg, Robert D | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 25570873 | 2014; |
| Accurate and efficient separation of left and right lungs from 3D CT scans: A generic hysteresis approach. | Ziyue Xu; Bagci, Ulas; Jonsson, Colleen; Jain, Sanjay; Mollura, Daniel J | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 25571373 | 2014; |
| Light-responsive nanoparticle depot to control release of a small molecule angiogenesis inhibitor in the posterior segment of the eye. | Huu, Viet Anh Nguyen; Luo, Jing; Zhu, Jie; Zhu, Jing; Patel, Sherrina; Boone, Alexander; Mahmoud, Enas; McFearin, Cathryn; Olejniczak, Jason; de Gracia Lux, Caroline; Lux, Jacques; Fomina, Nadezda; Huynh, Michelle; Zhang, Kang; Almutairi, Adah | Journal of controlled release : official journal of the Controlled Release Society. | 25571784 | 2015 Feb 28; |
| Combined inhibition of MAP kinase and KIT signaling synergistically destabilizes ETV1 and suppresses GIST tumor growth. | Ran, Leili; Sirota, Inna; Cao, Zhen; Murphy, Devan; Chen, Yuedan; Shukla, Shipra; Xie, Yuanyuan; Kaufmann, Michael C; Gao, Dong; Zhu, Sinan; Rossi, Ferdinando; Wongvipat, John; Taguchi, Takahiro; Tap, William D; Mellinghoff, Ingo K; Besmer, Peter; Antones | Cancer discovery. | 25572173 | 2015 Mar; |
| Cardiac and inflammatory biomarkers do not correlate with volume of heart or lung receiving radiation. | Kuo, Angera H; Ancukiewicz, Marek; Kozak, Kevin R; Yock, Torunn I; Padera, Timothy P | Radiation oncology (London, England). | 25573181 | 2015 Jan 9; |
| Gut microbiota. Antimicrobial peptide resistance mediates resilience of prominent gut commensals during inflammation. | Cullen, T W; Schofield, W B; Barry, N A; Putnam, E E; Rundell, E A; Trent, M S; Degnan, P H; Booth, C J; Yu, H; Goodman, A L | Science (New York, N.Y.). | 25574022 | 2015 Jan 9; |
| Glycans in the immune system and The Altered Glycan Theory of Autoimmunity: a critical review. | Maverakis, Emanual; Kim, Kyoungmi; Shimoda, Michiko; Gershwin, M Eric; Patel, Forum; Wilken, Reason; Raychaudhuri, Siba; Ruhaak, L Renee; Lebrilla, Carlito B | Journal of autoimmunity. | 25578468 | 2015 Feb; |
| Using non-enzymatic chemistry to influence microbial metabolism. | Wallace, Stephen; Schultz, Erica E; Balskus, Emily P | Current opinion in chemical biology. | 25579453 | 2015 Apr; |
| Mechanisms of HCV NS3 helicase monitored by optical tweezers. | Cheng, Wei | Methods in molecular biology (Clifton, N.J.). | 25579590 | 2015 Sep 21; |
| Photo-triggerable Hydrogel-Nanoparticle Hybrid Scaffolds for Remotely Controlled Drug Delivery. | Shah, Shreyas; Sasmal, Pijus K; Lee, Ki-Bum | Journal of materials chemistry. B. | 25580246 | 2014; |
| Psychiatric blood biomarkers: avoiding jumping to premature negative or positive conclusions. | Niculescu, A B; Levey, D; Le-Niculescu, H; Niculescu, E; Kurian, S M; Salomon, D | Molecular psychiatry. | 25582618 | 2015 Mar; |
| The development of next-generation screening and diagnostic platforms will change diabetes care. | Kumar, Rajiv B; Gupta, Mihir; Feldman, Brian J | Expert review of molecular diagnostics. | 25583407 | 2015 Mar; |
| Microfluidics for High School Chemistry Students. | Hemling, Melissa; Crooks, John A; Oliver, Piercen M; Brenner, Katie; Gilbertson, Jennifer; Lisensky, George C; Weibel, Douglas B | Journal of chemical education. | 25584013 | 2014 Jan 14; |
| Pre-Radiation Therapy Fluorine 18 Fluorodeoxyglucose PET Helps Identify Patients with Esophageal Cancer at High Risk for Radiation Pneumonitis. | Castillo, Richard; Pham, Ngoc; Castillo, Edward; Aso-Gonzalez, Samantha; Ansari, Sobiya; Hobbs, Brian; Palacio, Diana; Skinner, Heath; Guerrero, Thomas M | Radiology | 25584706 | 2015 Jun |
| Gold Nanoparticle-assisted Selective Photothermolysis of Adipose Tissue (NanoLipo). | Sheng, Wangzhong; Alhasan, Ali H; DiBernardo, Gabriella; Almutairi, Khalid M; Rubin, J Peter; DiBernardo, Barry E; Almutairi, Adah | Plastic and reconstructive surgery. Global open. | 25587517 | 2014 Dec; |
| A Combinatory Strategy for Detection of Live CTCs Using Microfiltration and a New Telomerase-Selective Adenovirus. | Ma, Yanchun; Hao, Sijie; Wang, Shuwen; Zhao, Yuanjun; Lim, Bora; Lei, Ming; Spector, David J; El-Deiry, Wafik S; Zheng, Si-Yang; Zhu, Jiyue | Molecular cancer therapeutics. | 25589497 | 2015 Mar; |
| Focus formation: a cell-based assay to determine the oncogenic potential of a gene. | Alvarez, Angel; Barisone, Gustavo A; Diaz, Elva | Journal of visualized experiments : JoVE. | 25590282 | 2014 Dec 31; |
| Engineering living functional materials. | Chen, Allen Y; Zhong, Chao; Lu, Timothy K | ACS synthetic biology. | 25592034 | 2015 Jan 16; |
| Loss of cftr function leads to pancreatic destruction in larval zebrafish. | Navis, Adam; Bagnat, Michel | Developmental biology. | 25592226 | 2015 Mar 15; |
| From circuits to behaviour in the amygdala. | Janak, Patricia H; Tye, Kay M | Nature. | 25592533 | 2015 Jan 15; |
| Molecular and genetic properties of tumors associated with local immune cytolytic activity. | Rooney, Michael S; Shukla, Sachet A; Wu, Catherine J; Getz, Gad; Hacohen, Nir | Cell. | 25594174 | 2015 Jan 15; |
| Manganese and microbial pathogenesis: sequestration by the Mammalian immune system and utilization by microorganisms. | Brophy, Megan Brunjes; Nolan, Elizabeth M | ACS chemical biology. | 25594606 | 2015 Mar 20; |
| Self-folding thermo-magnetically responsive soft microgrippers. | Breger, Joyce C; Yoon, ChangKyu; Xiao, Rui; Kwag, Hye Rin; Wang, Martha O; Fisher, John P; Nguyen, Thao D; Gracias, David H | ACS applied materials & interfaces. | 25594664 | 2015 Feb 11; |
| Mechanical systems biology of C. elegans touch sensation. | Krieg, Michael; Dunn, Alexander R; Goodman, Miriam B | BioEssays : news and reviews in molecular, cellular and developmental biology. | 25597279 | 2015 Mar; |
| Manganese binding properties of human calprotectin under conditions of high and low calcium: X-ray crystallographic and advanced electron paramagnetic resonance spectroscopic analysis. | Gagnon, Derek M; Brophy, Megan Brunjes; Bowman, Sarah E J; Stich, Troy A; Drennan, Catherine L; Britt, R David; Nolan, Elizabeth M | Journal of the American Chemical Society. | 25597447 | 2015 Mar 4; |
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| The role of the lymphatic system in inflammatory-erosive arthritis. | Bouta, Echoe M; Li, Jie; Ju, Yawen; Brown, Edward B; Ritchlin, Christopher T; Xing, Lianping; Schwarz, Edward M | Seminars in cell & developmental biology. | 25598390 | 2015 Feb; |
| Single-cell mass cytometry reveals intracellular survival/proliferative signaling in FLT3-ITD-mutated AML stem/progenitor cells. | Han, Lina; Qiu, Peng; Zeng, Zhihong; Jorgensen, Jeffrey L; Mak, Duncan H; Burks, Jared K; Schober, Wendy; McQueen, Teresa J; Cortes, Jorge; Tanner, Scott D; Roboz, Gail J; Kantarjian, Hagop M; Kornblau, Steven M; Guzman, Monica L; Andreeff, Michael; Konop | Cytometry. Part A : the journal of the International Society for Analytical Cytology. | 25598437 | 2015 Apr; |
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| Glycolytic enzymes localize to ribonucleoprotein granules in Drosophila germ cells, bind Tudor and protect from transposable elements. | Gao, Ming; Thomson, Travis C; Creed, T Michael; Tu, Shikui; Loganathan, Sudan N; Jackson, Christina A; McCluskey, Patrick; Lin, Yanyan; Collier, Scott E; Weng, Zhiping; Lasko, Paul; Ohi, Melanie D; Arkov, Alexey L | EMBO reports. | 25600116 | 2015 Mar; |
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| Structure, bioactivity, and resistance mechanism of streptomonomicin, an unusual lasso Peptide from an understudied halophilic actinomycete. | Metelev, Mikhail; Tietz, Jonathan I; Melby, Joel O; Blair, Patricia M; Zhu, Lingyang; Livnat, Itamar; Severinov, Konstantin; Mitchell, Douglas A | Chemistry & biology. | 25601074 | 2015 Feb 19; |
| Endothelial cells control pancreatic cell fate at defined stages through EGFL7 signaling. | Kao, Der-I; Lacko, Lauretta A; Ding, Bi-Sen; Huang, Chen; Phung, Kathleen; Gu, Guoqiang; Rafii, Shahin; Stuhlmann, Heidi; Chen, Shuibing | Stem cell reports. | 25601205 | 2015 Feb 10; |
| Extracellular metabolic energetics can promote cancer progression. | Loo, Jia Min; Scherl, Alexis; Nguyen, Alexander; Man, Fung Ying; Weinberg, Ethan; Zeng, Zhaoshi; Saltz, Leonard; Paty, Philip B; Tavazoie, Sohail F | Cell. | 25601461 | 2015 Jan 29; |
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| In vitro analysis of riboswitch-Spinach aptamer fusions as metabolite-sensing fluorescent biosensors. | Kellenberger, Colleen A; Hammond, Ming C | Methods in enzymology. | 25605385 | 2014 Dec 19; |
| Genetic engineering of hematopoietic stem cells to generate invariant natural killer T cells. | Smith, Drake J; Liu, Siyuan; Ji, Sunjong; Li, Bo; McLaughlin, Jami; Cheng, Donghui; Witte, Owen N; Yang, Lili | Proceedings of the National Academy of Sciences of the United States of America. | 25605948 | 2015 Feb 3; |
| Activation of a bacterial mechanosensitive channel in mammalian cells by cytoskeletal stress. | Heureaux, Johanna; Chen, Di; Murray, Victoria L; Deng, Cheri X; Liu, Allen P | Cellular and molecular bioengineering. | 25606062 | 2014 Sep; |
| Origins of cystic fibrosis lung disease. | Stoltz, David A; Meyerholz, David K; Welsh, Michael J | The New England journal of medicine. | 25607428 | 2015 Jan 22; |
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| In vitro expansion of corneal endothelial cells on biomimetic substrates. | Palchesko, Rachelle N; Lathrop, Kira L; Funderburgh, James L; Feinberg, Adam W | Scientific reports. | 25609008 | 2015; |
| The Efficacy of the Wee1 Inhibitor MK-1775 Combined with Temozolomide Is Limited by Heterogeneous Distribution across the Blood-Brain Barrier in Glioblastoma. | Pokorny, Jenny L; Calligaris, David; Gupta, Shiv K; Iyekegbe Jr, Dennis O; Mueller, Dustin; Bakken, Katrina K; Carlson, Brett L; Schroeder, Mark A; Evans, Debra L; Lou, Zhenkun; Decker, Paul A; Eckel-Passow, Jeanette E; Pucci, Vincenzo; Ma, Bennett; Shumw | Clinical cancer research : an official journal of the American Association for Cancer Research. | 25609063 | 2015 Apr 15; |
| The functional role of astrocyte calcium signaling in cortical blood flow regulation. | Biesecker, Kyle R; Srienc, Anja I | The Journal of neuroscience : the official journal of the Society for Neuroscience | 25609605 | 2015 Jan 21 |
| Chimeric antigen receptor engineered T cells can eliminate brain tumors and initiate long-term protection against recurrence. | Johnson, Laura A; Sanchez-Perez, Luis; Suryadevara, Carter M; Sampson, John H | Oncoimmunology. | 25610729 | 2014; |
| Computational analysis of fluid flow within a device for applying biaxial strain to cultured cells. | Lee, Jason; Baker, Aaron B | Journal of biomechanical engineering. | 25611013 | 2015 May; |
| Regulation of asymmetric division and CD8+ T lymphocyte fate specification by protein kinase Cýý and protein kinase Cýý/ýý. | Metz, Patrick J; Arsenio, Janilyn; Kakaradov, Boyko; Kim, Stephanie H; Remedios, Kelly A; Oakley, Katherine; Akimoto, Kazunori; Ohno, Shigeo; Yeo, Gene W; Chang, John T | Journal of immunology (Baltimore, Md. : 1950). | 25617472 | 2015 Mar 1; |
| High-throughput small-molecule screening in Caenorhabditis elegans. | Rangaraju, Sunitha; Solis, Gregory M; Petrascheck, Michael | Methods in molecular biology (Clifton, N.J.). | 25618342 | 2014 Dec 22; |
| Acute shear stress direction dictates adherent cell remodeling and verifies shear profile of spinning disk assays. | Fuhrmann, Alexander; Engler, Adam J | Physical biology. | 25619322 | 2015 Feb; |
| Biodegradable micelles capable of mannose-mediated targeted drug delivery to cancer cells. | Yin, Lichen; Chen, Yongbing; Zhang, Zhonghai; Yin, Qian; Zheng, Nan; Cheng, Jianjun | Macromolecular rapid communications. | 25619623 | 2015 Mar; |
| MyD88 signaling in T cells directs IgA-mediated control of the microbiota to promote health. | Kubinak, Jason L; Petersen, Charisse; Stephens, W Zac; Soto, Ray; Bake, Erin; O'Connell, Ryan M; Round, June L | Cell host & microbe. | 25620548 | 2015 Feb 11; |
| The Hsp104 N-terminal domain enables disaggregase plasticity and potentiation. | Sweeny, Elizabeth A; Jackrel, Meredith E; Go, Michelle S; Sochor, Matthew A; Razzo, Beatrice M; DeSantis, Morgan E; Gupta, Kushol; Shorter, James | Molecular cell. | 25620563 | 2015 Mar 5; |
| The lymph node microenvironment and its role in the progression of metastatic cancer. | Pereira, Ethel R; Jones, Dennis; Jung, Keehoon; Padera, Timothy P | Seminars in cell & developmental biology. | 25620792 | 2015 Feb; |
| Combining the Masking and Scaffolding Modalities of Colloidal Crystal Templates: Plasmonic Nanoparticle Arrays with Multiple Periodicities. | Yang, Shikuan; Slotcavage, Daniel; Mai, John D; Liang, Wansheng; Xie, Yuliang; Chen, Yuchao; Huang, Tony Jun | Chemistry of materials : a publication of the American Chemical Society | 25620849 | 2014 Nov 25 |
| 3D-resolved targeting of photodynamic therapy using temporal focusing. | Rowlands, Christopher J; Wu, Jackie; Uzel, Sebastien G M; Klein, Oliver; Evans, Conor L; So, Peter T C | Laser physics letters. | 25620902 | 2014 Nov; |
| Focusing on moving targets through scattering samples. | Zhou, Edward Haojiang; Ruan, Haowen; Yang, Changhuei; Judkewitz, Benjamin | Optica. | 25621302 | 2014; |
| Defective apical extrusion signaling contributes to aggressive tumor hallmarks. | Gu, Yapeng; Shea, Jill; Slattum, Gloria; Firpo, Matthew A; Alexander, Margaret; Mulvihill, Sean J; Golubovskaya, Vita M; Rosenblatt, Jody | eLife. | 25621765 | 2014 Sep 03; |
| RNA sequencing of mouse sinoatrial node reveals an upstream regulatory role for Islet-1 in cardiac pacemaker cells. | Vedantham, Vasanth; Galang, Giselle; Evangelista, Melissa; Deo, Rahul C; Srivastava, Deepak | Circulation research. | 25623957 | 2015 Feb 27; |
| Second-harmonic generation scattering directionality predicts tumor cell motility in collagen gels. | Burke, Kathleen A; Dawes, Ryan P; Cheema, Mehar K; Van Hove, Amy; Benoit, Danielle S W; Perry, Seth W; Brown, Edward | Journal of biomedical optics. | 25625899 | 2015 May; |
| Engineered commensal bacteria reprogram intestinal cells into glucose-responsive insulin-secreting cells for the treatment of diabetes. | Duan, Franklin F; Liu, Joy H; March, John C | Diabetes. | 25626737 | 2015 May; |
| Localization and abundance analysis of human lncRNAs at single-cell and single-molecule resolution. | Cabili, Moran N; Dunagin, Margaret C; McClanahan, Patrick D; Biaesch, Andrew; Padovan-Merhar, Olivia; Regev, Aviv; Rinn, John L; Raj, Arjun | Genome biology. | 25630241 | 2015; |
| Nanometer-scale water- and proton-diffusion heterogeneities across water channels in polymer electrolyte membranes. | Song, Jinsuk; Han, Oc Hee; Han, Songi | Angewandte Chemie (International ed. in English). | 25630609 | 2015 Mar 16; |
| Low-frequency and rare exome chip variants associate with fasting glucose and type 2 diabetes susceptibility. | Wessel, Jennifer; Chu, Audrey Y; Willems, Sara M; Wang, Shuai; Yaghootkar, Hanieh; Brody, Jennifer A; Dauriz, Marco; Hivert, Marie-France; Raghavan, Sridharan; Lipovich, Leonard; Hidalgo, Bertha; Fox, Keolu; Huffman, Jennifer E; An, Ping; Lu, Yingchang; R | Nature communications. | 25631608 | 2015 Jan 26; |
| A strategy for tissue self-organization that is robust to cellular heterogeneity and plasticity. | Cerchiari, Alec E; Garbe, James C; Jee, Noel Y; Todhunter, Michael E; Broaders, Kyle E; Peehl, Donna M; Desai, Tejal A; LaBarge, Mark A; Thomson, Matthew; Gartner, Zev J | Proceedings of the National Academy of Sciences of the United States of America. | 25633040 | 2015 Feb 17; |
| Prioritizing causal disease genes using unbiased genomic features. | Deo, Rahul C; Musso, Gabriel; Tasan, Murat; Tang, Paul; Poon, Annie; Yuan, Christiana; Felix, Janine F; Vasan, Ramachandran S; Beroukhim, Rameen; De Marco, Teresa; Kwok, Pui-Yan; MacRae, Calum A; Roth, Frederick P | Genome biology. | 25633252 | 2014; |
| Lipid agonism: The PIP2 paradigm of ligand-gated ion channels. | Hansen, Scott B | Biochimica et biophysica acta. | 25633344 | 2015 May; |
| Identification of cardiovascular lineage descendants at single-cell resolution. | Li, Guang; Plonowska, Karolina; Kuppusamy, Rajarajan; Sturzu, Anthony; Wu, Sean M | Development (Cambridge, England). | 25633351 | 2015 Mar 1; |
| Spontaneous emergence of overgrown molar teeth in a colony of Prairie voles (Microtus ochrogaster). | Jheon, Andrew H; Prochazkova, Michaela; Sherman, Michael; Manoli, Devanand S; Shah, Nirao M; Carbone, Lawrence; Klein, Ophir | International journal of oral science. | 25634121 | 2015 Mar; |
| Constitutive activation of myosin-dependent contractility sensitizes glioma tumor-initiating cells to mechanical inputs and reduces tissue invasion. | Wong, Sophie Y; Ulrich, Theresa A; Deleyrolle, Loic P; MacKay, Joanna L; Lin, Jung-Ming G; Martuscello, Regina T; Jundi, Musa A; Reynolds, Brent A; Kumar, Sanjay | Cancer research. | 25634210 | 2015 Mar 15; |
| GOLPH3 links the Golgi, DNA damage, and cancer. | Buschman, Matthew D; Rahajeng, Juliati; Field, Seth J | Cancer research. | 25634214 | 2015 Feb 15; |
| Insights into methyltransferase specificity and bioactivity of derivatives of the antibiotic plantazolicin. | Hao, Yue; Blair, Patricia M; Sharma, Abhishek; Mitchell, Douglas A; Nair, Satish K | ACS chemical biology. | 25635336 | 2015 May 15; |
| Decoding neural circuits that control compulsive sucrose seeking. | Nieh, Edward H; Matthews, Gillian A; Allsop, Stephen A; Presbrey, Kara N; Leppla, Christopher A; Wichmann, Romy; Neve, Rachael; Wildes, Craig P; Tye, Kay M | Cell. | 25635460 | 2015 Jan 29; |
| A virtual screen discovers novel, fragment-sized inhibitors of Mycobacterium tuberculosis InhA. | Perryman, Alexander L; Yu, Weixuan; Wang, Xin; Ekins, Sean; Forli, Stefano; Li, Shao-Gang; Freundlich, Joel S; Tonge, Peter J; Olson, Arthur J | Journal of chemical information and modeling. | 25636146 | 2015 Mar 23; |
| Establishing the stability and reversibility of protein pyrophosphorylation with synthetic peptides. | Yates, Lisa M; Fiedler, Dorothea | Chembiochem : a European journal of chemical biology. | 25639821 | 2015 Feb 9; |
| Spatiotemporal Analyses of Osteogenesis and Angiogenesis via Intravital Imaging in Cranial Bone Defect Repair. | Huang, Chunlan; Ness, Vincent P; Yang, Xiaochuan; Chen, Hongli; Luo, Jiebo; Brown, Edward B; Zhang, Xinping | Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research. | 25640220 | 2015 Jul; |
| Extensive strain-level copy-number variation across human gut microbiome species. | Greenblum, Sharon; Carr, Rogan; Borenstein, Elhanan | Cell. | 25640238 | 2015 Feb 12; |
| Precise Manipulation and Patterning of Protein Crystals for Macromolecular Crystallography Using Surface Acoustic Waves. | Guo, Feng; Zhou, Weijie; Li, Peng; Mao, Zhangming; Yennawar, Neela H; French, Jarrod B; Huang, Tony Jun | Small (Weinheim an der Bergstrasse, Germany). | 25641793 | 2015 Jun; |
| Drawbacks in the use of unconventional hydrophobic anhydrides for histone derivatization in bottom-up proteomics PTM analysis. | Sidoli, Simone; Yuan, Zuo-Fei; Lin, Shu; Karch, Kelly; Wang, Xiaoshi; Bhanu, Natarajan; Arnaudo, Anna M; Britton, Laura-Mae; Cao, Xing-Jun; Gonzales-Cope, Michelle; Han, Yumiao; Liu, Shichong; Molden, Rosalynn C; Wein, Samuel; Afjehi-Sadat, Leila; Garcia, | Proteomics. | 25641854 | 2015 May; |
| Mechanism of automaticity in cardiomyocytes derived from human induced pluripotent stem cells. | Kim, Jong J; Yang, Lei; Lin, Bo; Zhu, Xiaodong; Sun, Bin; Kaplan, Aaron D; Bett, Glenna C L; Rasmusson, Randall L; London, Barry; Salama, Guy | Journal of molecular and cellular cardiology. | 25644533 | 2015 Apr; |
| PRDM16 binds MED1 and controls chromatin architecture to determine a brown fat transcriptional program. | Harms, Matthew J; Lim, Hee-Woong; Ho, Yugong; Shapira, Suzanne N; Ishibashi, Jeff; Rajakumari, Sona; Steger, David J; Lazar, Mitchell A; Won, Kyoung-Jae; Seale, Patrick | Genes & development. | 25644604 | 2015 Feb 1; |
| Rapid drug tolerance and dramatic sterilizing effect of moxifloxacin monotherapy in a novel hollow-fiber model of intracellular Mycobacterium kansasii disease. | Srivastava, Shashikant; Pasipanodya, Jotam; Sherman, Carleton M; Meek, Claudia; Leff, Richard; Gumbo, Tawanda | Antimicrobial agents and chemotherapy. | 25645830 | 2015 Apr; |
| In vitro activity of RX-P873 against Enterobacteriaceae, Pseudomonas aeruginosa, and Acinetobacter baumannii. | Flamm, Robert K; Rhomberg, Paul R; Jones, Ronald N; Farrell, David J | Antimicrobial agents and chemotherapy. | 25645834 | 2015 Apr; |
| Self-affirmation alters the brain's response to health messages and subsequent behavior change. | Falk, Emily B; O'Donnell, Matthew Brook; Cascio, Christopher N; Tinney, Francis; Kang, Yoona; Lieberman, Matthew D; Taylor, Shelley E; An, Lawrence; Resnicow, Kenneth; Strecher, Victor J | Proceedings of the National Academy of Sciences of the United States of America. | 25646442 | 2015 Feb 17; |
| Applying superresolution localization-based microscopy to neurons. | Zhong, Haining | Synapse (New York, N.Y.). | 25648102 | 2015 May; |
| A kinetic model identifies phosphorylated estrogen receptor-* (ER*) as a critical regulator of ER* dynamics in breast cancer. | Tian, Dan; Solodin, Natalia M; Rajbhandari, Prashant; Bjorklund, Kelsi; Alarid, Elaine T; Kreeger, Pamela K | FASEB journal : official publication of the Federation of American Societies for Experimental Biology. | 25648997 | 2015 May; |
| The human burst suppression electroencephalogram of deep hypothermia. | Brandon Westover, M; Ching, ShiNung; Kumaraswamy, Vishakhadatta M; Akeju, Oluwaseun; Pierce, Eric; Cash, Sydney S; Kilbride, Ronan; Brown, Emery N; Purdon, Patrick L | Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. | 25649968 | 2015 Oct; |
| FOXP1 potentiates Wnt/*-catenin signaling in diffuse large B cell lymphoma. | Walker, Matthew P; Stopford, Charles M; Cederlund, Maria; Fang, Fang; Jahn, Christopher; Rabinowitz, Alex D; Goldfarb, Dennis; Graham, David M; Yan, Feng; Deal, Allison M; Fedoriw, Yuri; Richards, Kristy L; Davis, Ian J; Weidinger, Gilbert; Damania, Bloss | Science signaling. | 25650440 | 2015 Feb 3; |
| An affinity reagent for the recognition of pyrophosphorylated peptides. | Conway, John H; Fiedler, Dorothea | Angewandte Chemie (International ed. in English). | 25651128 | 2015 Mar 23; |
| In vivo optogenetic stimulation of the rodent central nervous system. | Sidor, Michelle M; Davidson, Thomas J; Tye, Kay M; Warden, Melissa R; Diesseroth, Karl; McClung, Colleen A | Journal of visualized experiments : JoVE. | 25651158 | 2015 Jan 15; |
| How the ankyrin and SOCS box protein, ASB9, binds to creatine kinase. | Balasubramaniam, Deepa; Schiffer, Jamie; Parnell, Jonathan; Mir, Stephan P; Amaro, Rommie E; Komives, Elizabeth A | Biochemistry. | 25654263 | 2015 Mar 3; |
| Relation between speckle decorrelation and optical phase conjugation (OPC)-based turbidity suppression through dynamic scattering media: a study on in vivo mouse skin. | Jang, Mooseok; Ruan, Haowen; Vellekoop, Ivo M; Judkewitz, Benjamin; Chung, Euiheon; Yang, Changhuei | Biomedical optics express. | 25657876 | 2015 Jan 01; |
| CD22?E12 as a molecular target for RNAi therapy. | Uckun, Fatih M; Ma, Hong; Cheng, Jianjun; Myers, Dorothea E; Qazi, Sanjive | British journal of haematology. | 25659406 | 2015 May; |
| MIPSTR: a method for multiplex genotyping of germline and somatic STR variation across many individuals. | Carlson, Keisha D; Sudmant, Peter H; Press, Maximilian O; Eichler, Evan E; Shendure, Jay; Queitsch, Christine | Genome research. | 25659649 | 2015 May; |
| The Pex1/Pex6 complex is a heterohexameric AAA+ motor with alternating and highly coordinated subunits. | Gardner, Brooke M; Chowdhury, Saikat; Lander, Gabriel C; Martin, Andreas | Journal of molecular biology. | 25659908 | 2015 Mar 27; |
| Risk. | Cole, Stephen R; Hudgens, Michael G; Brookhart, M Alan; Westreich, Daniel | American journal of epidemiology. | 25660080 | 2015 Feb 15; |
| Preventing postnatal cytomegalovirus infection in the preterm infant: should it be done, can it be done, and at what cost? | Wright, Clyde J; Permar, Sallie R | The Journal of pediatrics. | 25662832 | 2015 Apr; |
| Silane surface modification for improved bioadhesion of esophageal stents. | Karakoy, Mert; Gultepe, Evin; Pandey, Shivendra; Khashab, Mouen A; Gracias, David H | Applied surface science. | 25663731 | 2014 Aug 30; |
| Imaging and three-dimensional reconstruction of chemical groups inside a protein complex using atomic force microscopy. | Kim, Duckhoe; Sahin, Ozgur | Nature nanotechnology. | 25664622 | 2015 Mar; |
| Visualizing attack of Escherichia coli by the antimicrobial peptide human defensin 5. | Chileveru, Haritha R; Lim, Shion A; Chairatana, Phoom; Wommack, Andrew J; Chiang, I-Ling; Nolan, Elizabeth M | Biochemistry. | 25664683 | 2015 Mar 10; |
| A light-inducible CRISPR-Cas9 system for control of endogenous gene activation. | Polstein, Lauren R; Gersbach, Charles A | Nature chemical biology. | 25664691 | 2015 Mar; |
| The Hippo effector YAP promotes resistance to RAF- and MEK-targeted cancer therapies. | Lin, Luping; Sabnis, Amit J; Chan, Elton; Olivas, Victor; Cade, Lindsay; Pazarentzos, Evangelos; Asthana, Saurabh; Neel, Dana; Yan, Jenny Jiacheng; Lu, Xinyuan; Pham, Luu; Wang, Mingxue M; Karachaliou, Niki; Cao, Maria Gonzalez; Manzano, Jose Luis; Ramire | Nature genetics. | 25665005 | 2015 Mar; |
| ChIP-seq for genome-scale analysis of bacterial DNA-binding proteins. | Bonocora, Richard P; Wade, Joseph T | Methods in molecular biology (Clifton, N.J.). | 25665574 | 2015 Jan 28; |
| Large-scale recording of astrocyte activity. | Nimmerjahn, Axel; Bergles, Dwight E | Current opinion in neurobiology. | 25665733 | 2015 Jun; |
| Protein footprinting by pyrite shrink-wrap laminate. | Leser, Micheal; Pegan, Jonathan; El Makkaoui, Mohammed; Schlatterer, Joerg C; Khine, Michelle; Law, Matt; Brenowitz, Michael | Lab on a chip. | 25666234 | 2015 Apr 7; |
| Immunodeficiency and autoimmune enterocolopathy linked to NFAT5 haploinsufficiency. | Boland, Brigid S; Widjaja, Christella E; Banno, Asoka; Zhang, Bing; Kim, Stephanie H; Stoven, Samantha; Peterson, Michael R; Jones, Marilyn C; Su, H Irene; Crowe, Sheila E; Bui, Jack D; Ho, Samuel B; Okugawa, Yoshinaga; Goel, Ajay; Marietta, Eric V; Khosr | Journal of immunology (Baltimore, Md. : 1950). | 25667416 | 2015 Mar 15; |
| Pentobra: A Potent Antibiotic with Multiple Layers of Selective Antimicrobial Mechanisms against Propionibacterium Acnes. | Schmidt, Nathan W; Agak, George W; Deshayes, Stephanie; Yu, Yang; Blacker, Alyssa; Champer, Jackson; Xian, Wujing; Kasko, Andrea M; Kim, Jenny; Wong, Gerard C L | The Journal of investigative dermatology. | 25668237 | 2015 Jun; |
| HIV protease inhibitors block streptolysin S production. | Maxson, Tucker; Deane, Caitlin D; Molloy, Evelyn M; Cox, Courtney L; Markley, Andrew L; Lee, Shaun W; Mitchell, Douglas A | ACS chemical biology. | 25668590 | 2015 May 15; |
| Quantification of plant chlorophyll content using Google Glass. | Cortazar, Bingen; Koydemir, Hatice Ceylan; Tseng, Derek; Feng, Steve; Ozcan, Aydogan | Lab on a chip. | 25669673 | 2015 Apr 7; |
| Red blood cell population dynamics. | Higgins, John M | Clinics in laboratory medicine. | 25676371 | 2015 Mar; |
| Perinatal cytomegalovirus and varicella zoster virus infections: epidemiology, prevention, and treatment. | Bialas, Kristy M; Swamy, Geeta K; Permar, Sallie R | Clinics in perinatology. | 25677997 | 2015 Mar; |
| Chemical biology. A small-molecule inhibitor of the aberrant transcription factor CBF?-SMMHC delays leukemia in mice. | Illendula, Anuradha; Pulikkan, John A; Zong, Hongliang; Grembecka, Jolanta; Xue, Liting; Sen, Siddhartha; Zhou, Yunpeng; Boulton, Adam; Kuntimaddi, Aravinda; Gao, Yan; Rajewski, Roger A; Guzman, Monica L; Castilla, Lucio H; Bushweller, John H | Science (New York, N.Y.). | 25678665 | 2015 Feb 13; |
| MEK guards proteome stability and inhibits tumor-suppressive amyloidogenesis via HSF1. | Tang, Zijian; Dai, Siyuan; He, Yishu; Doty, Rosalinda A; Shultz, Leonard D; Sampson, Stephen Byers; Dai, Chengkai | Cell. | 25679764 | 2015 Feb 12; |
| Redox-responsive, reversibly-crosslinked thiolated cationic helical polypeptides for efficient siRNA encapsulation and delivery. | Zheng, Nan; Song, Ziyuan; Liu, Yang; Zhang, Rujing; Zhang, Ruoyan; Yao, Catherine; Uckun, Fatih M; Yin, Lichen; Cheng, Jianjun | Journal of controlled release : official journal of the Controlled Release Society. | 25683619 | 2015 May 10; |
| Disease specific therapies in leukodystrophies and leukoencephalopathies. | Helman, Guy; Van Haren, Keith; Bonkowsky, Joshua L; Bernard, Genevieve; Pizzino, Amy; Braverman, Nancy; Suhr, Dean; Patterson, Marc C; Ali Fatemi, S; Leonard, Jeff; van der Knaap, Marjo S; Back, Stephen A; Damiani, Stephen; Goldman, Steven A; Takanohashi, Asako; Petryniak, Magdalena; Rowitch, David; Messing, Albee; Wrabetz, Lawrence; Schiffmann, Raphael; Eichler, Florian; Escolar, Maria L; Vanderver, Adeline; GLIA Consortium | Molecular genetics and metabolism. | 25684057 | 2015 Apr; |
| Interferon ?/? Enhances the Cytotoxic Response of MEK Inhibition in Melanoma. | Litvin, Oren; Schwartz, Sarit; Wan, Zhenmao; Schild, Tanya; Rocco, Mark; Oh, Nul Loren; Chen, Bo-Juen; Goddard, Noel; Pratilas, Christine; Pe'er, Dana | Molecular cell. | 25684207 | 2015 Mar 5; |
| Cellular binding of nanoparticles disrupts the membrane potential. | Warren, Emilie A K; Payne, Christine K | RSC advances. | 25685328 | 2015 Jan 1; |
| Do Dog Behavioral Characteristics Predict the Quality of the Relationship between Dogs and Their Owners? | Hoffman, Christy L; Chen, Pan; Serpell, James A; Jacobson, Kristen C | Human-animal interaction bulletin. | 25685855 | 2013; |
| Daytime spikes in dopaminergic activity drive rapid mood-cycling in mice. | Sidor, M M; Spencer, S M; Dzirasa, K; Parekh, P K; Tye, K M; Warden, M R; Arey, R N; Enwright, J F; Jacobsen, J P R; Kumar, S; Remillard, E M; Caron, M G; Deisseroth, K; McClung, C A | Molecular psychiatry. | 25687774 | 2015 Nov; |
| Quantitative proteomic analysis of histone modifications. | Huang, He; Lin, Shu; Garcia, Benjamin A; Zhao, Yingming | Chemical reviews. | 25688442 | 2015 Mar 25; |
| High-throughput and label-free single nanoparticle sizing based on time-resolved on-chip microscopy. | McLeod, Euan; Dincer, T Umut; Veli, Muhammed; Ertas, Yavuz N; Nguyen, Chau; Luo, Wei; Greenbaum, Alon; Feizi, Alborz; Ozcan, Aydogan | ACS nano. | 25688665 | 2015 Mar 24; |
| Modulation of red blood cell population dynamics is a fundamental homeostatic response to disease. | Patel, Harsh H; Patel, Hasmukh R; Higgins, John M | American journal of hematology. | 25691355 | 2015 May; |
| Characterization of BRD4 during mammalian postmeiotic sperm development. | Bryant, Jessica M; Donahue, Greg; Wang, Xiaoshi; Meyer-Ficca, Mirella; Luense, Lacey J; Weller, Angela H; Bartolomei, Marisa S; Blobel, Gerd A; Meyer, Ralph G; Garcia, Benjamin A; Berger, Shelley L | Molecular and cellular biology. | 25691659 | 2015 Apr; |
| Design, synthesis, and characterization of graphene-nanoparticle hybrid materials for bioapplications. | Yin, Perry T; Shah, Shreyas; Chhowalla, Manish; Lee, Ki-Bum | Chemical reviews. | 25692385 | 2015 Apr 08; |
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| Balance between cell-substrate adhesion and myosin contraction determines the frequency of motility initiation in fish keratocytes. | Barnhart, Erin; Lee, Kun-Chun; Allen, Greg M; Theriot, Julie A; Mogilner, Alex | Proceedings of the National Academy of Sciences of the United States of America. | 25848042 | 2015 Apr 21; |
| Rationally Designed MicroRNA-Based Genetic Classifiers Target Specific Neurons in the Brain. | Sayeg, Marianna K; Weinberg, Benjamin H; Cha, Susie S; Goodloe, Michael; Wong, Wilson W; Han, Xue | ACS synthetic biology. | 25848814 | 2015 Jul 17; |
| Structural and biophysical characterization of an epitope-specific engineered Fab fragment and complexation with membrane proteins: implications for co-crystallization. | Johnson, Jennifer L; Entzminger, Kevin C; Hyun, Jeongmin; Kalyoncu, Sibel; Heaner Jr, David P; Morales, Ivan A; Sheppard, Aly; Gumbart, James C; Maynard, Jennifer A; Lieberman, Raquel L | Acta crystallographica. Section D, Biological crystallography. | 25849400 | 2015 Apr; |
| Epigenome editing by a CRISPR-Cas9-based acetyltransferase activates genes from promoters and enhancers. | Hilton, Isaac B; D'Ippolito, Anthony M; Vockley, Christopher M; Thakore, Pratiksha I; Crawford, Gregory E; Reddy, Timothy E; Gersbach, Charles A | Nature biotechnology. | 25849900 | 2015 May; |
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| The Use of Induced Pluripotent Stem Cell Technology to Advance Autism Research and Treatment. | Acab, Allan; Muotri, Alysson Renato | Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics. | 25851569 | 2015 Jul; |
| Design and evaluation of a peptide-based immunotoxin for breast cancer therapeutics. | Weigel, Kelsey J; Shen, Luqun; Thomas, Clayton L; Alber, Daniel; Drapalik, Lauren; Schafer, Zachary T; Lee, Shaun W | FEBS open bio. | 25853036 | 2015 Mar 14; |
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| Local failure in parameningeal rhabdomyosarcoma correlates with poor response to induction chemotherapy. | Ladra, Matthew M; Mandeville, Henry C; Niemierko, Andrzej; Padera, Timothy P; Friedmann, Alison M; MacDonald, Shannon M; Ebb, David; Chen, Yen-Lin; Tarbell, Nancy J; Yock, Torunn I | International journal of radiation oncology, biology, physics. | 25864172 | 2015 Jun 01; |
| Cytoplasmic dynein is required for the spatial organization of protein aggregates in filamentous fungi. | Egan, Martin J; McClintock, Mark A; Hollyer, Ian H L; Elliott, Hunter L; Reck-Peterson, Samara L | Cell reports. | 25865884 | 2015 Apr 14; |
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| Kinetochore components are required for central spindle assembly. | Maton, Gilliane; Edwards, Frances; Lacroix, Benjamin; Stefanutti, Marine; Laband, Kimberley; Lieury, Tiffany; Kim, Taekyung; Espeut, Julien; Canman, Julie C; Dumont, Julien | Nature cell biology. | 25866924 | 2015 May; |
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| Transgene expression in the Nop-tTA driver line is not inherently restricted to the entorhinal cortex. | Yetman, Michael J; Lillehaug, Sveinung; Bjaalie, Jan G; Leergaard, Trygve B; Jankowsky, Joanna L | Brain structure & function. | 25869275 | 2015 Apr 14; |
| Young, proliferative thymic epithelial cells engraft and function in aging thymuses. | Kim, Mi-Jeong; Miller, Christine M; Shadrach, Jennifer L; Wagers, Amy J; Serwold, Thomas | Journal of immunology (Baltimore, Md. : 1950). | 25870244 | 2015 May 15; |
| AXL mediates resistance to PI3K? inhibition by activating the EGFR/PKC/mTOR axis in head and neck and esophageal squamous cell carcinomas. | Elkabets, Moshe; Pazarentzos, Evangelos; Juric, Dejan; Sheng, Qing; Pelossof, Raphael A; Brook, Samuel; Benzaken, Ana Oaknin; Rodon, Jordi; Morse, Natasha; Yan, Jenny Jiacheng; Liu, Manway; Das, Rita; Chen, Yan; Tam, Angela; Wang, Huiqin; Liang, Jinsheng; | Cancer cell. | 25873175 | 2015 Apr 13; |
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| Toward barrier free contact to molybdenum disulfide using graphene electrodes. | Liu, Yuan; Wu, Hao; Cheng, Hung-Chieh; Yang, Sen; Zhu, Enbo; He, Qiyuan; Ding, Mengning; Li, Dehui; Guo, Jian; Weiss, Nathan O; Huang, Yu; Duan, Xiangfeng | Nano letters. | 25879371 | 2015 May 13; |
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| Caspase-3-independent apoptotic pathways contribute to interleukin-32?-mediated control of Mycobacterium tuberculosis infection in THP-1 cells. | Bai, Xiyuan; Kinney, William H; Su, Wen-Lin; Bai, An; Ovrutsky, Alida R; Honda, Jennifer R; Netea, Mihai G; Henao-Tamayo, Marcela; Ordway, Diane J; Dinarello, Charles A; Chan, Edward D | BMC microbiology. | 25887904 | 2015 Feb 21; |
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| Human umbilical cord blood-derived mononuclear cells improve murine ventricular function upon intramyocardial delivery in right ventricular chronic pressure overload. | Oommen, Saji; Yamada, Satsuki; Cantero Peral, Susana; Campbell, Katherine A; Bruinsma, Elizabeth S; Terzic, Andre; Nelson, Timothy J | Stem cell research & therapy. | 25890300 | 2015 Mar 26; |
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| Matrix stiffness drives epithelial-mesenchymal transition and tumour metastasis through a TWIST1-G3BP2 mechanotransduction pathway. | Wei, Spencer C; Fattet, Laurent; Tsai, Jeff H; Guo, Yurong; Pai, Vincent H; Majeski, Hannah E; Chen, Albert C; Sah, Robert L; Taylor, Susan S; Engler, Adam J; Yang, Jing | Nature cell biology. | 25893917 | 2015 May; |
| Intrinsic retroviral reactivation in human preimplantation embryos and pluripotent cells. | Grow, Edward J; Flynn, Ryan A; Chavez, Shawn L; Bayless, Nicholas L; Wossidlo, Mark; Wesche, Daniel J; Martin, Lance; Ware, Carol B; Blish, Catherine A; Chang, Howard Y; Pera, Renee A Reijo; Wysocka, Joanna | Nature. | 25896322 | 2015 Jun 11; |
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| A generalizable platform for interrogating target- and signal-specific consequences of electrophilic modifications in redox-dependent cell signaling. | Lin, Hong-Yu; Haegele, Joseph A; Disare, Michael T; Lin, Qishan; Aye, Yimon | Journal of the American Chemical Society. | 25909755 | 2015 May 20; |
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| Leptin Manipulation Reduces Appetite and Causes a Switch in Mating Preference in the Plains Spadefoot Toad (Spea bombifrons). | Garcia, Nicholas W; Pfennig, Karin S; Burmeister, Sabrina S | PloS one. | 25919309 | 2015 Apr 28; |
| 2015 Guidelines for Establishing Genetically Modified Rat Models for Cardiovascular Research. | Flister, Michael J; Prokop, Jeremy W; Lazar, Jozef; Shimoyama, Mary; Dwinell, Melinda; Geurts, Aron | Journal of cardiovascular translational research. | 25920443 | 2015 Jun; |
| Continuously growing rodent molars result from a predictable quantitative evolutionary change over 50 million years. | Tapaltsyan, Vagan; Eronen, Jussi T; Lawing, A Michelle; Sharir, Amnon; Janis, Christine; Jernvall, Jukka; Klein, Ophir D | Cell reports. | 25921530 | 2015 May 5; |
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| Bacterial division. Mechanical crack propagation drives millisecond daughter cell separation in Staphylococcus aureus. | Zhou, Xiaoxue; Halladin, David K; Rojas, Enrique R; Koslover, Elena F; Lee, Timothy K; Huang, Kerwyn Casey; Theriot, Julie A | Science (New York, N.Y.). | 25931560 | 2015 May 1; |
| Thermal-Responsive Behavior of a Cell Compatible Chitosan/Pectin Hydrogel. | Birch, Nathan P; Barney, Lauren E; Pandres, Elena; Peyton, Shelly R; Schiffman, Jessica D | Biomacromolecules. | 25932898 | 2015 Jun 08; |
| Inhibition of Mouse Breast Tumor-Initiating Cells by Calcitriol and Dietary Vitamin D. | Jeong, Youngtae; Swami, Srilatha; Krishnan, Aruna V; Williams, Jasmaine D; Martin, Shanique; Horst, Ronald L; Albertelli, Megan A; Feldman, Brian J; Feldman, David; Diehn, Maximilian | Molecular cancer therapeutics. | 25934710 | 2015 Aug; |
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| Inhibitory Neuron Transplantation into Adult Visual Cortex Creates a New Critical Period that Rescues Impaired Vision. | Davis, Melissa F; Figueroa Velez, Dario X; Guevarra, Roblen P; Yang, Michael C; Habeeb, Mariyam; Carathedathu, Mathew C; Gandhi, Sunil P | Neuron. | 25937171 | 2015 May 20; |
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| The parvalbumin/somatostatin ratio is increased in Pten mutant mice and by human PTEN ASD alleles. | Vogt, Daniel; Cho, Kathleen K A; Lee, Anthony T; Sohal, Vikaas S; Rubenstein, John L R | Cell reports. | 25937288 | 2015 May 12; |
| Targeting tumor vasculature with aptamer-functionalized doxorubicin-polylactide nanoconjugates for enhanced cancer therapy. | Tang, Li; Tong, Rong; Coyle, Virginia J; Yin, Qian; Pondenis, Holly; Borst, Luke B; Cheng, Jianjun; Fan, Timothy M | ACS nano. | 25938427 | 2015 May 26; |
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| Nuclear bodies: the emerging biophysics of nucleoplasmic phases. | Zhu, Lian; Brangwynne, Clifford P | Current opinion in cell biology. | 25942753 | 2015 Jun; |
| Dysregulation of astrocyte extracellular signaling in Costello syndrome. | Krencik, Robert; Hokanson, Kenton C; Narayan, Aditi R; Dvornik, Jill; Rooney, Gemma E; Rauen, Katherine A; Weiss, Lauren A; Rowitch, David H; Ullian, Erik M | Science translational medicine. | 25947161 | 2015 May 6; |
| Brains, genes, and primates. | Izpisua Belmonte, Juan Carlos; Callaway, Edward M; Caddick, Sarah J; Churchland, Patricia; Feng, Guoping; Homanics, Gregg E; Lee, Kuo-Fen; Leopold, David A; Miller, Cory T; Mitchell, Jude F; Mitalipov, Shoukhrat; Moutri, Alysson R; Movshon, J Anthony; Okano, Hideyuki; Reynolds, John H; Ringach, Dario; Sejnowski, Terrence J; Silva, Afonso C; Strick, Peter L; Wu, Jun; Zhang, Feng | Neuron. | 25950631 | 2015 May 6; |
| Single-molecule analysis of myocyte differentiation reveals bimodal lineage commitment. | Gibson, Tyler M; Gersbach, Charles A | Integrative biology : quantitative biosciences from nano to macro. | 25953198 | 2015 Jun; |
| Waking up to the alarm: sleep, clocks, and making memory (s)tick. | Gerstner, Jason R; Aton, Sara J; Heller, H Craig | Frontiers in systems neuroscience. | 25954165 | 2015; |
| Microarchitectural and mechanical characterization of the sickle bone. | Green, Mykel; Akinsami, Idowu; Lin, Angela; Banton, Shereka; Ghosh, Samit; Chen, Binbin; Platt, Manu; Osunkwo, Ifeyinwa; Ofori-Acquah, Solomon; Guldberg, Robert; Barabino, Gilda | Journal of the mechanical behavior of biomedical materials. | 25957113 | 2015 Aug; |
| Bacterial Filament Systems: Toward Understanding Their Emergent Behavior and Cellular Functions. | Eun, Ye-Jin; Kapoor, Mrinal; Hussain, Saman; Garner, Ethan C | The Journal of biological chemistry. | 25957405 | 2015 Jul 10; |
| Building the Microtubule Cytoskeleton Piece by Piece. | Alfaro-Aco, Ray; Petry, Sabine | The Journal of biological chemistry | 25957410 | 2015 Jul 10 |
| RNA exosome-regulated long non-coding RNA transcription controls super-enhancer activity. | Pefanis, Evangelos; Wang, Jiguang; Rothschild, Gerson; Lim, Junghyun; Kazadi, David; Sun, Jianbo; Federation, Alexander; Chao, Jaime; Elliott, Oliver; Liu, Zhi-Ping; Economides, Aris N; Bradner, James E; Rabadan, Raul; Basu, Uttiya | Cell. | 25957685 | 2015 May 7; |
| Multivalent Microtubule Recognition by Tubulin Tyrosine Ligase-like Family Glutamylases. | Garnham, Christopher P; Vemu, Annapurna; Wilson-Kubalek, Elizabeth M; Yu, Ian; Szyk, Agnieszka; Lander, Gabriel C; Milligan, Ronald A; Roll-Mecak, Antonina | Cell. | 25959773 | 2015 May 21; |
| Co-transcriptional DNA and RNA Cleavage during Type III CRISPR-Cas Immunity. | Samai, Poulami; Pyenson, Nora; Jiang, Wenyan; Goldberg, Gregory W; Hatoum-Aslan, Asma; Marraffini, Luciano A | Cell. | 25959775 | 2015 May 21; |
| A beginning of the end: new insights into the functional organization of telomeres. | Wood, Ashley M; Laster, Kyle; Rice, Ellen L; Kosak, Steven T | Nucleus (Austin, Tex.). | 25961132 | 2015 Apr 29; |
| A hydrogel-endothelial cell implant mimics infantile hemangioma: modulation by survivin and the Hippo pathway. | Tsuneki, Masayuki; Hardee, Steven; Michaud, Michael; Morotti, Raffaella; Lavik, Erin; Madri, Joseph A | Laboratory investigation; a journal of technical methods and pathology. | 25961170 | 2015 Jul; |
| Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes. | Beliveau, Brian J; Boettiger, Alistair N; Avendaño, Maier S; Jungmann, Ralf; McCole, Ruth B; Joyce, Eric F; Kim-Kiselak, Caroline; Bantignies, Frédéric; Fonseka, Chamith Y; Erceg, Jelena; Hannan, Mohammed A; Hoang, Hien G; Colognori, David; Lee, Jeannie T; Shih, William M; Yin, Peng; Zhuang, Xiaowei; Wu, Chao-ting | Nature communications. | 25962338 | 2015; |
| Optogenetic control of molecular motors and organelle distributions in cells. | Duan, Liting; Che, Daphne; Zhang, Kai; Ong, Qunxiang; Guo, Shunling; Cui, Bianxiao | Chemistry & biology. | 25963241 | 2015 May 21; |
| RNA-Based Fluorescent Biosensors for Live Cell Imaging of Second Messenger Cyclic di-AMP. | Kellenberger, Colleen A; Chen, Chen; Whiteley, Aaron T; Portnoy, Daniel A; Hammond, Ming C | Journal of the American Chemical Society. | 25965978 | 2015 May 27; |
| Live Cell Imaging Using Riboswitch-Spinach tRNA Fusions as Metabolite-Sensing Fluorescent Biosensors. | Kellenberger, Colleen A; Hallberg, Zachary F; Hammond, Ming C | Methods in molecular biology (Clifton, N.J.). | 25967055 | 2015; |
| Model for adhesion clutch explains biphasic relationship between actin flow and traction at the cell leading edge. | Craig, Erin M; Stricker, Jonathan; Gardel, Margaret; Mogilner, Alex | Physical biology. | 25969948 | 2015 May; |
| Spatial distribution of cell-cell and cell-ECM adhesions regulates force balance while main-taining E-cadherin molecular tension in cell pairs. | Sim, Joo Yong; Moeller, Jens; Hart, Kevin C; Ramallo, Diego; Vogel, Viola; Dunn, Alex R; Nelson, W James; Pruitt, Beth L | Molecular biology of the cell. | 25971797 | 2015 Jul 1; |
| Classic reaction kinetics can explain complex patterns of antibiotic action. | Abel Zur Wiesch, Pia; Abel, Sören; Gkotzis, Spyridon; Ocampo, Paolo; Engelstädter, Jan; Hinkley, Trevor; Magnus, Carsten; Waldor, Matthew K; Udekwu, Klas; Cohen, Ted | Science translational medicine. | 25972005 | 2015 May 13; |
| Zebrafish Renal Pathology: Emerging Models of Acute Kidney Injury. | McKee, Robert A; Wingert, Rebecca A | Current pathobiology reports. | 25973344 | 2015; |
| Detection of minimal residual disease in B lymphoblastic leukemia using viSNE. | DiGiuseppe, Joseph A; Tadmor, Michelle D; Pe'er, Dana | Cytometry. Part B, Clinical cytometry. | 25974871 | 2015 Sep-Oct; |
| Angiopoietin-4 increases permeability of blood vessels and promotes lymphatic dilation. | Kesler, Cristina T; Pereira, Ethel R; Cui, Cheryl H; Nelson, Gregory M; Masuck, David J; Baish, James W; Padera, Timothy P | FASEB journal : official publication of the Federation of American Societies for Experimental Biology. | 25977256 | 2015 Sep; |
| Cancer. The transcription factor GABP selectively binds and activates the mutant TERT promoter in cancer. | Bell, Robert J A; Rube, H Tomas; Kreig, Alex; Mancini, Andrew; Fouse, Shaun D; Nagarajan, Raman P; Choi, Serah; Hong, Chibo; He, Daniel; Pekmezci, Melike; Wiencke, John K; Wrensch, Margaret R; Chang, Susan M; Walsh, Kyle M; Myong, Sua; Song, Jun S; Costel | Science (New York, N.Y.). | 25977370 | 2015 May 29; |
| NetCooperate: a network-based tool for inferring host-microbe and microbe-microbe cooperation. | Levy, Roie; Carr, Rogan; Kreimer, Anat; Freilich, Shiri; Borenstein, Elhanan | BMC bioinformatics. | 25980407 | 2015 May 17; |
| A Primary Role for the Tsix lncRNA in Maintaining Random X-Chromosome Inactivation. | Gayen, Srimonta; Maclary, Emily; Buttigieg, Emily; Hinten, Michael; Kalantry, Sundeep | Cell reports. | 25981039 | 2015 May 26; |
| Endogenous repair signaling after brain injury and complementary bioengineering approaches to enhance neural regeneration. | Addington, Caroline P; Roussas, Adam; Dutta, Dipankar; Stabenfeldt, Sarah E | Biomarker insights. | 25983552 | 2015 May 12; |
| Vertical nanopillars for in situ probing of nuclear mechanics in adherent cells. | Hanson, Lindsey; Zhao, Wenting; Lou, Hsin-Ya; Lin, Ziliang Carter; Lee, Seok Woo; Chowdary, Praveen; Cui, Yi; Cui, Bianxiao | Nature nanotechnology. | 25984833 | 2015 Jun; |
| The Dual Characteristics of Light-Induced Cryptochrome 2, Homo-oligomerization and Heterodimerization, for Optogenetic Manipulation in Mammalian Cells. | Che, Daphne L; Duan, Liting; Zhang, Kai; Cui, Bianxiao | ACS synthetic biology. | 25985220 | 2015 Jun 8; |
| Host-Directed Therapies for Tuberculosis. | Tobin, David M | Cold Spring Harbor perspectives in medicine. | 25986592 | 2015; |
| Endoplasmic reticulum stress-independent activation of unfolded protein response kinases by a small molecule ATP-mimic. | Mendez, Aaron S; Alfaro, Jennifer; Morales-Soto, Marisol A; Dar, Arvin C; McCullagh, Emma; Gotthardt, Katja; Li, Han; Acosta-Alvear, Diego; Sidrauski, Carmela; Korennykh, Alexei V; Bernales, Sebastian; Shokat, Kevan M; Walter, Peter | eLife. | 25986605 | 2015 May 19; |
| Single-cell analysis of mast cell degranulation induced by airway smooth muscle-secreted chemokines. | Manning, Benjamin M; Meyer, Audrey F; Gruba, Sarah M; Haynes, Christy L | Biochimica et biophysica acta. | 25986989 | 2015 Sep; |
| KPC and NDM-1 genes in related Enterobacteriaceae strains and plasmids from Pakistan and the United States. | Pesesky, Mitchell W; Hussain, Tahir; Wallace, Meghan; Wang, Bin; Andleeb, Saadia; Burnham, Carey-Ann D; Dantas, Gautam | Emerging infectious diseases. | 25988236 | 2015 Jun; |
| Lumiquinone A, an ?-Aminomalonate-Derived Aminobenzoquinone from Photorhabdus luminescens. | Park, Hyun Bong; Crawford, Jason M | Journal of natural products. | 25988621 | 2015 Jun 26; |
| Bone marrow transcriptome and epigenome profiles of equine common variable immunodeficiency patients unveil block of B lymphocyte differentiation. | Tallmadge, Rebecca L; Shen, Lishuang; Tseng, Chia T; Miller, Steven C; Barry, Jay; Felippe, M Julia B | Clinical immunology (Orlando, Fla.). | 25988861 | 2015 Oct; |
| Adaptable hydrogel networks with reversible linkages for tissue engineering. | Wang, Huiyuan; Heilshorn, Sarah C | Advanced materials (Deerfield Beach, Fla.). | 25989348 | 2015 Jul 1; |
| Self-assembly of complex two-dimensional shapes from single-stranded DNA tiles. | Wei, Bryan; Vhudzijena, Michelle K; Robaszewski, Joanna; Yin, Peng | Journal of visualized experiments : JoVE. | 25993048 | 2015 May 8; |
| Selectively manipulable acoustic-powered microswimmers. | Ahmed, Daniel; Lu, Mengqian; Nourhani, Amir; Lammert, Paul E; Stratton, Zak; Muddana, Hari S; Crespi, Vincent H; Huang, Tony Jun | Scientific reports. | 25993314 | 2015 May 20; |
| Fetal Mammalian Heart Generates a Robust Compensatory Response to Cell Loss. | Sturzu, Anthony C; Rajarajan, Kuppusamy; Passer, Derek; Plonowska, Karolina; Riley, Alyssa; Tan, Timothy C; Sharma, Arun; Xu, Adele F; Engels, Marc C; Feistritzer, Rebecca; Li, Guang; Selig, Martin K; Geissler, Richard; Robertson, Keston D; Scherrer-Crosb | Circulation. | 25995316 | 2015 Jul 14; |
| Placental mitochondrial methylation and exposure to airborne particulate matter in the early life environment: An ENVIRONAGE birth cohort study. | Janssen, Bram G; Byun, Hyang-Min; Gyselaers, Wilfried; Lefebvre, Wouter; Baccarelli, Andrea A; Nawrot, Tim S | Epigenetics. | 25996590 | 2015; |
| Comparative transcriptomic analysis of multiple cardiovascular fates from embryonic stem cells predicts novel regulators in human cardiogenesis. | Li, Yang; Lin, Bo; Yang, Lei | Scientific reports. | 25997157 | 2015 May 21; |
| Structural and functional studies of membrane remodeling machines. | Kalia, Raghav; Talledge, Nathaniel; Frost, Adam | Methods in cell biology. | 25997348 | 2015; |
| Engineering artificial cells by combining HeLa-based cell-free expression and ultrathin double emulsion template. | Ho, Kenneth K Y; Murray, Victoria L; Liu, Allen P | Methods in cell biology. | 25997354 | 2015 Apr 8; |
| Epimuscular Fat in the Human Rotator Cuff Is a Novel Beige Depot. | Meyer, Gretchen A; Gibbons, Michael C; Sato, Eugene; Lane, John G; Ward, Samuel R; Engler, Adam J | Stem cells translational medicine. | 25999520 | 2015 Jul; |
| Integrative clinical genomics of advanced prostate cancer. | Robinson, Dan; Van Allen, Eliezer M; Wu, Yi-Mi; Schultz, Nikolaus; Lonigro, Robert J; Mosquera, Juan-Miguel; Montgomery, Bruce; Taplin, Mary-Ellen; Pritchard, Colin C; Attard, Gerhardt; Beltran, Himisha; Abida, Wassim; Bradley, Robert K; Vinson, Jake; Cao | Cell. | 26000489 | 2015 May 21; |
| Prognostic factors for survival in patients with high-grade osteosarcoma using the Surveillance, Epidemiology, and End Results (SEER) Program database. | Duchman, Kyle R; Gao, Yubo; Miller, Benjamin J | Cancer epidemiology. | 26002013 | 2015 Aug; |
| Arrhythmia in stem cell transplantation. | Almeida, Shone O; Skelton, Rhys J; Adigopula, Sasikanth; Ardehali, Reza | Cardiac electrophysiology clinics. | 26002399 | 2015 Jun; |
| Brain network alterations and vulnerability to simulated neurodegeneration in breast cancer. | Kesler, Shelli R; Watson, Christa L; Blayney, Douglas W | Neurobiology of aging. | 26004016 | 2015 Aug; |
| Engineered composite tissue as a bioartificial limb graft. | Jank, Bernhard J; Xiong, Linjie; Moser, Philipp T; Guyette, Jacques P; Ren, Xi; Cetrulo, Curtis L; Leonard, David A; Fernandez, Leopoldo; Fagan, Shawn P; Ott, Harald C | Biomaterials. | 26004237 | 2015 Aug; |
| Polo-like kinase 2 regulates angiogenic sprouting and blood vessel development. | Yang, Hongbo; Fang, Longhou; Zhan, Rui; Hegarty, Jeffrey M; Ren, Jie; Hsiai, Tzung K; Gleeson, Joseph G; Miller, Yury I; Trejo, JoAnn; Chi, Neil C | Developmental biology. | 26004360 | 2015 Aug 15; |
| Molecular mechanism of resolving trinucleotide repeat hairpin by helicases. | Qiu, Yupeng; Niu, Hengyao; Vukovic, Lela; Sung, Patrick; Myong, Sua | Structure (London, England : 1993). | 26004439 | 2015 Jun 2; |
| Anticancer Camptothecin-N-Poly(lactic acid) Nanoconjugates with Facile Hydrolysable Linker. | Yin, Qian; Tong, Rong; Yin, Lichen; Fan, Timothy M; Cheng, Jianjun | Polymer chemistry. | 26005498 | 2014; |
| Enhanced Non-Viral Gene Delivery to Human Embryonic Stem Cells via Small Molecule-Mediated Transient Alteration of Cell Structure. | Yen, Jonathan; Yin, Lichen; Cheng, Jianjun | Journal of materials chemistry. B, Materials for biology and medicine. | 26005572 | 2014; |
| New challenges in the diagnosis and management of cystic fibrosis. | Levy, Hara; Farrell, Philip M | The Journal of pediatrics. | 26008169 | 2015 Jun; |
| A large-scale screen reveals genes that mediate electrotaxis in Dictyostelium discoideum. | Gao, Runchi; Zhao, Siwei; Jiang, Xupin; Sun, Yaohui; Zhao, Sanjun; Gao, Jing; Borleis, Jane; Willard, Stacey; Tang, Ming; Cai, Huaqing; Kamimura, Yoichiro; Huang, Yuesheng; Jiang, Jianxin; Huang, Zunxi; Mogilner, Alex; Pan, Tingrui; Devreotes, Peter N; Zh | Science signaling. | 26012633 | 2015 May 26; |
| Second harmonic generation microscopy reveals altered collagen microstructure in usual interstitial pneumonia versus healthy lung. | Kottmann, Robert Matthew; Sharp, Jesse; Owens, Kristina; Salzman, Peter; Xiao, Guang-Qian; Phipps, Richard P; Sime, Patricia J; Brown, Edward B; Perry, Seth W | Respiratory research. | 26013144 | 2015 May 27; |
| The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics. | Elbaum-Garfinkle, Shana; Kim, Younghoon; Szczepaniak, Krzysztof; Chen, Carlos Chih-Hsiung; Eckmann, Christian R; Myong, Sua; Brangwynne, Clifford P | Proceedings of the National Academy of Sciences of the United States of America. | 26015579 | 2015 Jun 9; |
| Targets for Combating the Evolution of Acquired Antibiotic Resistance. | Culyba, Matthew J; Mo, Charlie Y; Kohli, Rahul M | Biochemistry. | 26016604 | 2015 Jun 16; |
| Fabrication and cytocompatibility of in situ crosslinked carbon nanomaterial films. | Patel, Sunny C; Lalwani, Gaurav; Grover, Kartikey; Qin, Yi-Xian; Sitharaman, Balaji | Scientific reports. | 26018775 | 2015 May 28; |
| Putative Microcircuit-Level Substrates for Attention Are Disrupted in Mouse Models of Autism. | Luongo, Francisco J; Horn, Meryl E; Sohal, Vikaas S | Biological psychiatry. | 26022075 | 2015 Apr 28; |
| Modeling the complex pathology of Alzheimer's disease in Drosophila. | Fernandez-Funez, Pedro; de Mena, Lorena; Rincon-Limas, Diego E | Experimental neurology. | 26024860 | 2015 Dec; |
| Genome-wide specificity of DNA binding, gene regulation, and chromatin remodeling by TALE- and CRISPR/Cas9-based transcriptional activators. | Polstein, Lauren R; Perez-Pinera, Pablo; Kocak, D Dewran; Vockley, Christopher M; Bledsoe, Peggy; Song, Lingyun; Safi, Alexias; Crawford, Gregory E; Reddy, Timothy E; Gersbach, Charles A | Genome research. | 26025803 | 2015 Aug; |
| A Stem Cell-Derived Platform for Studying Single Synaptic Vesicles in Dopaminergic Synapses. | Gu, Haigang; Lazarenko, Roman M; Koktysh, Dmitry; Iacovitti, Lorraine; Zhang, Qi | Stem cells translational medicine. | 26025981 | 2015 Aug; |
| Accelerated wound healing by injectable microporous gel scaffolds assembled from annealed building blocks. | Griffin, Donald R; Weaver, Westbrook M; Scumpia, Philip O; Di Carlo, Dino; Segura, Tatiana | Nature materials. | 26030305 | 2015 Jul; |
| Compact and modular multicolour fluorescence detector for droplet microfluidics. | Cole, Russell H; de Lange, Niek; Gartner, Zev J; Abate, Adam R | Lab on a chip. | 26032595 | 2015 Jul 7; |
| Chemical probes reveal an extraseptal mode of cross-linking in Staphylococcus aureus. | Gautam, Samir; Kim, Taehan; Spiegel, David A | Journal of the American Chemical Society. | 26035224 | 2015 Jun 17; |
| YAP in MAPK pathway targeted therapy resistance. | Flaherty, Keith T; Wargo, Jennifer A; Bivona, Trever G | Cell cycle (Georgetown, Tex.). | 26036142 | 2015; |
| Dual Stimuli-Responsive Poly(?-amino ester) Nanoparticles for On-Demand Burst Release. | Lee, Jung Seok; Deng, Xiaojian; Han, Patrick; Cheng, Jianjun | Macromolecular bioscience. | 26036966 | 2015 Sep; |
| Retrograde NGF axonal transport--motor coordination in the unidirectional motility regime. | Chowdary, Praveen D; Che, Daphne L; Zhang, Kai; Cui, Bianxiao | Biophysical journal. | 26039170 | 2015 Jun 02; |
| Molecular dynamics analysis of antibody recognition and escape by human H1N1 influenza hemagglutinin. | Ieong, Pek; Amaro, Rommie E; Li, Wilfred W | Biophysical journal. | 26039171 | 2015 Jun 2; |
| Dissecting enzyme function with microfluidic-based deep mutational scanning. | Romero, Philip A; Tran, Tuan M; Abate, Adam R | Proceedings of the National Academy of Sciences of the United States of America. | 26040002 | 2015 Jun 9; |
| A noisy linear map underlies oscillations in cell size and gene expression in bacteria. | Tanouchi, Yu; Pai, Anand; Park, Heungwon; Huang, Shuqiang; Stamatov, Rumen; Buchler, Nicolas E; You, Lingchong | Nature. | 26040722 | 2015 Jul 16; |
| Memory acquisition and retrieval impact different epigenetic processes that regulate gene expression. | Peixoto, Lucia L; Wimmer, Mathieu E; Poplawski, Shane G; Tudor, Jennifer C; Kenworthy, Charles A; Liu, Shichong; Mizuno, Keiko; Garcia, Benjamin A; Zhang, Nancy R; Giese, K; Abel, Ted | BMC genomics. | 26040834 | 2015 May 26; |
| The Torsin Activator LULL1 Is Required for Efficient Growth of Herpes Simplex Virus 1. | Turner, Elizabeth M; Brown, Rebecca S H; Laudermilch, Ethan; Tsai, Pei-Ling; Schlieker, Christian | Journal of virology. | 26041288 | 2015 Aug; |
| Ghrelin. | Müller, T D; Nogueiras, R; Andermann, M L; Andrews, Z B; Anker, S D; Argente, J; Batterham, R L; Benoit, S C; Bowers, C Y; Broglio, F; Casanueva, F F; D'Alessio, D; Depoortere, I; Geliebter, A; Ghigo, E; Cole, P A; Cowley, M; Cummings, D E; Dagher, A; Dia | Molecular metabolism. | 26042199 | 2015 Jun; |
| 3D Printed Programmable Release Capsules. | Gupta, Maneesh K; Meng, Fanben; Johnson, Blake N; Kong, Yong Lin; Tian, Limei; Yeh, Yao-Wen; Masters, Nina; Singamaneni, Srikanth; McAlpine, Michael C | Nano letters. | 26042472 | 2015 Aug 12; |
| Apoc2 loss-of-function zebrafish mutant as a genetic model of hyperlipidemia. | Liu, Chao; Gates, Keith P; Fang, Longhou; Amar, Marcelo J; Schneider, Dina A; Geng, Honglian; Huang, Wei; Kim, Jungsu; Pattison, Jennifer; Zhang, Jian; Witztum, Joseph L; Remaley, Alan T; Dong, P Duc; Miller, Yury I | Disease models & mechanisms. | 26044956 | 2015 Aug 1; |
| Transcriptional Regulatory Circuits Controlling Brown Fat Development and Activation. | Seale, Patrick | Diabetes. | 26050669 | 2015 Jul; |
| DNA nanotechnology: new adventures for an old warhorse. | Zakeri, Bijan; Lu, Timothy K | Current opinion in chemical biology. | 26056949 | 2015 Oct; |
| A Fluorescent Sensor and Gel Stain for Detection of Pyrophosphorylated Proteins. | Williams, Florence J; Fiedler, Dorothea | ACS chemical biology. | 26061479 | 2015 Sep 18; |
| Basal exon skipping and genetic pleiotropy: A predictive model of disease pathogenesis. | Drivas, Theodore G; Wojno, Adam P; Tucker, Budd A; Stone, Edwin M; Bennett, Jean | Science translational medicine. | 26062849 | 2015 Jun 10; |
| Investigation of the Lack of Angiogenesis in the Formation of Lymph Node Metastases. | Jeong, Han-Sin; Jones, Dennis; Liao, Shan; Wattson, Daniel A; Cui, Cheryl H; Duda, Dan G; Willett, Christopher G; Jain, Rakesh K; Padera, Timothy P | Journal of the National Cancer Institute. | 26063793 | 2015 Sep; |
| Synthesis and biomedical applications of functional poly(?-hydroxy acids) via ring-opening polymerization of O-carboxyanhydrides. | Yin, Qian; Yin, Lichen; Wang, Hua; Cheng, Jianjun | Accounts of chemical research. | 26065588 | 2015 Jul 21; |
| Democratization of Nanoscale Imaging and Sensing Tools Using Photonics. | McLeod, Euan; Wei, Qingshan; Ozcan, Aydogan | Analytical chemistry. | 26068279 | 2015 Jul 7; |
| The B. subtilis Accessory Helicase PcrA Facilitates DNA Replication through Transcription Units. | Merrikh, Christopher N; Brewer, Bonita J; Merrikh, Houra | PLoS genetics. | 26070154 | 2015 Jun; |
| Cross-species oncogenomics using zebrafish models of cancer. | White, Richard M | Current opinion in genetics & development. | 26070506 | 2015 Feb; |
| The influence of lexical statistics on temporal lobe cortical dynamics during spoken word listening. | Cibelli, Emily S; Leonard, Matthew K; Johnson, Keith; Chang, Edward F | Brain and language. | 26072003 | 2015 Aug; |
| Phenome-driven disease genetics prediction toward drug discovery. | Chen, Yang; Li, Li; Zhang, Guo-Qiang; Xu, Rong | Bioinformatics (Oxford, England). | 26072493 | 2015 Jun 15; |
| Realizing the potential of mobile mental health: new methods for new data in psychiatry. | Torous, John; Staples, Patrick; Onnela, Jukka-Pekka | Current psychiatry reports. | 26073363 | 2015 Aug; |
| RNA Exosome Regulates AID DNA Mutator Activity in the B Cell Genome. | Pefanis, Evangelos; Basu, Uttiya | Advances in immunology. | 26073986 | 2015 May 14; |
| Drosophila comes of age as a model system for understanding the function of cytoskeletal proteins in cells, tissues, and organisms. | Rodal, Avital A; Del Signore, Steven J; Martin, Adam C | Cytoskeleton (Hoboken, N.J.). | 26074334 | 2015 May; |
| A neural network that finds a naturalistic solution for the production of muscle activity. | Sussillo, David; Churchland, Mark M; Kaufman, Matthew T; Shenoy, Krishna V | Nature neuroscience. | 26075643 | 2015 Jul; |
| Placenta-on-a-chip: a novel platform to study the biology of the human placenta. | Lee, Ji Soo; Romero, Roberto; Han, Yu Mi; Kim, Hee Chan; Kim, Chong Jai; Hong, Joon-Seok; Huh, Dongeun | The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians. | 26075842 | 2016; |
| Integrating single-molecule experiments and discrete stochastic models to understand heterogeneous gene transcription dynamics. | Munsky, Brian; Fox, Zachary; Neuert, Gregor | Methods (San Diego, Calif.). | 26079925 | 2015 Sep 1; |
| Next-generation libraries for robust RNA interference-based genome-wide screens. | Kampmann, Martin; Horlbeck, Max A; Chen, Yuwen; Tsai, Jordan C; Bassik, Michael C; Gilbert, Luke A; Villalta, Jacqueline E; Kwon, S Chul; Chang, Hyeshik; Kim, V Narry; Weissman, Jonathan S | Proceedings of the National Academy of Sciences of the United States of America. | 26080438 | 2015 Jun 30; |
| Interactions of 1D- and 2D-layered inorganic nanoparticles with fibroblasts and human mesenchymal stem cells. | Rashkow, Jason Thomas; Talukdar, Yahfi; Lalwani, Gaurav; Sitharaman, Balaji | Nanomedicine (London, England). | 26080694 | 2015 June; |
| Immunotherapeutic Approaches To Prevent Cytomegalovirus-Mediated Disease. | Seedah, Edith A; Frye, Zachary P; Maynard, Jennifer A | Microbiology spectrum. | 26082112 | 2014 Feb; |
| Age at Entry Into Care, Timing of Antiretroviral Therapy Initiation, and 10-Year Mortality Among HIV-Seropositive Adults in the United States. | Edwards, Jessie K; Cole, Stephen R; Westreich, Daniel; Mugavero, Michael J; Eron, Joseph J; Moore, Richard D; Mathews, William C; Hunt, Peter; Williams, Carolyn; Centers for AIDS Research Network of Integrated Clinical Systems investigators | Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. | 26082505 | 2015 Oct 1; |
| Selective Vaporization of Superheated Nanodroplets for Rapid, Sensitive, Acoustic Biosensing. | Chattaraj, Rajarshi; Mohan, Praveena; Besmer, Jeremy D; Goodwin, Andrew P | Advanced healthcare materials. | 26084414 | 2015 Aug; |
| Profiling of adrenocorticotropic hormone and arginine vasopressin in human pituitary gland and tumor thin tissue sections using droplet-based liquid-microjunction surface-sampling-HPLC-ESI-MS-MS. | Kertesz, Vilmos; Calligaris, David; Feldman, Daniel R; Changelian, Armen; Laws, Edward R; Santagata, Sandro; Agar, Nathalie Y R; Van Berkel, Gary J | Analytical and bioanalytical chemistry. | 26084546 | 2015 Aug; |
| Vinculin network-mediated cytoskeletal remodeling regulates contractile function in the aging heart. | Kaushik, Gaurav; Spenlehauer, Alice; Sessions, Ayla O; Trujillo, Adriana S; Fuhrmann, Alexander; Fu, Zongming; Venkatraman, Vidya; Pohl, Danielle; Tuler, Jeremy; Wang, Mingyi; Lakatta, Edward G; Ocorr, Karen; Bodmer, Rolf; Bernstein, Sanford I; Van Eyk, J | Science translational medicine. | 26084806 | 2015 Jun 17; |
| From analog to digital models of gene regulation. | Munsky, Brian; Neuert, Gregor | Physical biology. | 26086470 | 2015 Jul; |
| Identification of novel Fgf enhancers and their role in dental evolution. | Tapaltsyan, Vagan; Charles, Cyril; Hu, Jianxin; Mindell, David; Ahituv, Nadav; Wilson, Gregory M; Black, Brian L; Viriot, Laurent; Klein, Ophir D | Evolution & development. | 26086993 | 2016 Jan-Feb; |
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| Endothelial cells and cathepsins: Biochemical and biomechanical regulation. | Platt, Manu O; Shockey, W Andrew | Biochimie. | 26458976 | 2016 Mar; |
| Helical antimicrobial polypeptides with radial amphiphilicity. | Xiong, Menghua; Lee, Michelle W; Mansbach, Rachael A; Song, Ziyuan; Bao, Yan; Peek Jr, Richard M; Yao, Catherine; Chen, Lin-Feng; Ferguson, Andrew L; Wong, Gerard C L; Cheng, Jianjun | Proceedings of the National Academy of Sciences of the United States of America. | 26460016 | 2015 Oct 27; |
| Racism at the intersections: Gender and socioeconomic differences in the experience of racism among African Americans. | Kwate, Naa Oyo A; Goodman, Melody S | The American journal of orthopsychiatry. | 26460700 | 2015 Sep; |
| The genomic landscape of ribosomal peptides containing thiazole and oxazole heterocycles. | Cox, Courtney L; Doroghazi, James R; Mitchell, Douglas A | BMC genomics. | 26462797 | 2015; |
| Genome-Wide Profiling of Alternative Translation Initiation Sites. | Gao, Xiangwei; Wan, Ji; Qian, Shu-Bing | Methods in molecular biology (Clifton, N.J.). | 26463392 | 2016; |
| Chaperones in Neurodegeneration. | Lindberg, Iris; Shorter, James; Wiseman, R Luke; Chiti, Fabrizio; Dickey, Chad A; McLean, Pamela J | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 26468185 | 2015 Oct 14; |
| All-Optical Interrogation of Neural Circuits. | Emiliani, Valentina; Cohen, Adam E; Deisseroth, Karl; Häusser, Michael | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 26468193 | 2015 Oct 14; |
| High-throughput, Highly Sensitive Analyses of Bacterial Morphogenesis Using Ultra Performance Liquid Chromatography. | Desmarais, Samantha M; Tropini, Carolina; Miguel, Amanda; Cava, Felipe; Monds, Russell D; de Pedro, Miguel A; Huang, Kerwyn Casey | The Journal of biological chemistry. | 26468288 | 2015 Dec 25; |
| A high-throughput screen of inactive X chromosome reactivation identifies the enhancement of DNA demethylation by 5-aza-2'-dC upon inhibition of ribonucleotide reductase. | Minkovsky, Alissa; Sahakyan, Anna; Bonora, Giancarlo; Damoiseaux, Robert; Dimitrova, Elizabeth; Rubbi, Liudmilla; Pellegrini, Matteo; Radu, Caius G; Plath, Kathrin | Epigenetics & chromatin. | 26468331 | 2015; |
| Mammalian Lipopolysaccharide Receptors Incorporated into the Retroviral Envelope Augment Virus Transmission. | Wilks, Jessica; Lien, Egil; Jacobson, Amy N; Fischbach, Michael A; Qureshi, Nilofer; Chervonsky, Alexander V; Golovkina, Tatyana V | Cell host & microbe. | 26468748 | 2015 Oct 14; |
| Global Analysis of Palmitoylated Proteins in Toxoplasma gondii. | Foe, Ian T; Child, Matthew A; Majmudar, Jaimeen D; Krishnamurthy, Shruthi; van der Linden, Wouter A; Ward, Gary E; Martin, Brent R; Bogyo, Matthew | Cell host & microbe. | 26468752 | 2015 Oct 14; |
| Molecular mechanisms governing differential robustness of development and environmental responses in plants. | Lachowiec, Jennifer; Queitsch, Christine; Kliebenstein, Daniel J | Annals of botany. | 26473020 | 2015 Oct 14; |
| Identification of the Polyketide Biosynthetic Machinery for the Indolizidine Alkaloid Cyclizidine. | Huang, Wei; Kim, Seong Jong; Liu, Joyce; Zhang, Wenjun | Organic letters. | 26473429 | 2015 Nov 6; |
| An internal promoter underlies the difference in disease severity between N- and C-terminal truncation mutations of Titin in zebrafish. | Zou, Jun; Tran, Diana; Baalbaki, Mai; Tang, Ling Fung; Poon, Annie; Pelonero, Angelo; Titus, Erron W; Yuan, Christiana; Shi, Chenxu; Patchava, Shruthi; Halper, Elizabeth; Garg, Jasmine; Movsesyan, Irina; Yin, Chaoying; Wu, Roland; Wilsbacher, Lisa D; Liu, Jiandong; Hager, Ronald L; Coughlin, Shaun R; Jinek, Martin; Pullinger, Clive R; Kane, John P; Hart, Daniel O; Kwok, Pui-Yan; Deo, Rahul C | eLife. | 26473617 | 2015; |
| RNA Controls PolyQ Protein Phase Transitions. | Zhang, Huaiying; Elbaum-Garfinkle, Shana; Langdon, Erin M; Taylor, Nicole; Occhipinti, Patricia; Bridges, Andrew A; Brangwynne, Clifford P; Gladfelter, Amy S | Molecular cell. | 26474065 | 2015 Oct 15; |
| Asymmetric Cell Division in T Lymphocyte Fate Diversification. | Arsenio, Janilyn; Metz, Patrick J; Chang, John T | Trends in immunology. | 26474675 | 2015 Nov; |
| Controversies in preterm brain injury. | Penn, Anna A; Gressens, Pierre; Fleiss, Bobbi; Back, Stephen A; Gallo, Vittorio | Neurobiology of disease. | 26477300 | 2016 08; |
| Identifying the Minimal Enzymes Required for Biosynthesis of Epoxyketone Proteasome Inhibitors. | Liu, Joyce; Zhu, Xuejun; Zhang, Wenjun | Chembiochem : a European journal of chemical biology. | 26477320 | 2015 Dec; |
| An Xist-activating antisense RNA required for X-chromosome inactivation. | Sarkar, Mrinal K; Gayen, Srimonta; Kumar, Surinder; Maclary, Emily; Buttigieg, Emily; Hinten, Michael; Kumari, Archana; Harris, Clair; Sado, Takashi; Kalantry, Sundeep | Nature communications. | 26477563 | 2015; |
| Perceiving the Black female body: Race and gender in police constructions of body weight. | Kwate, Naa Oyo A; Threadcraft, Shatema | Race and social problems. | 26478750 | 2015 Sep; |
| Bacteriocin production augments niche competition by enterococci in the mammalian gastrointestinal tract. | Kommineni, Sushma; Bretl, Daniel J; Lam, Vy; Chakraborty, Rajrupa; Hayward, Michael; Simpson, Pippa; Cao, Yumei; Bousounis, Pavlos; Kristich, Christopher J; Salzman, Nita H | Nature. | 26479034 | 2015 Oct 29; |
| Treatment and Survival Trends in Glottic Carcinoma in Situ and Stage I Cancer From 1988 to 2012. | Khaja, Sobia F; Hoffman, Henry T; Pagedar, Nitin A | The Annals of otology, rhinology, and laryngology. | 26481178 | 2016 Apr; |
| Anionic Phospholipids Stabilize RecA Filament Bundles in Escherichia coli. | Rajendram, Manohary; Zhang, Leili; Reynolds, Bradley J; Auer, George K; Tuson, Hannah H; Ngo, Khanh V; Cox, Michael M; Yethiraj, Arun; Cui, Qiang; Weibel, Douglas B | Molecular cell. | 26481664 | 2015 Nov 5; |
| Frequency swept microwaves for hyperfine decoupling and time domain dynamic nuclear polarization. | Hoff, Daniel E M; Albert, Brice J; Saliba, Edward P; Scott, Faith J; Choi, Eric J; Mardini, Michael; Barnes, Alexander B | Solid state nuclear magnetic resonance. | 26482131 | 2015 Nov; |
| Cathepsin Protease Inhibition Reduces Endometriosis Lesion Establishment. | Porter, Kristi M; Wieser, Friedrich A; Wilder, Catera L; Sidell, Neil; Platt, Manu O | Reproductive sciences (Thousand Oaks, Calif.). | 26482207 | 2016 May; |
| Maternal CD4+ T cells protect against severe congenital cytomegalovirus disease in a novel nonhuman primate model of placental cytomegalovirus transmission. | Bialas, Kristy M; Tanaka, Takayuki; Tran, Dollnovan; Varner, Valerie; Cisneros De La Rosa, Eduardo; Chiuppesi, Flavia; Wussow, Felix; Kattenhorn, Lisa; Macri, Sheila; Kunz, Erika L; Estroff, Judy A; Kirchherr, Jennifer; Yue, Yujuan; Fan, Qihua; Lauck, Mic | Proceedings of the National Academy of Sciences of the United States of America. | 26483473 | 2015 Nov 03; |
| Tau Aggregation Propensity Engrained in Its Solution State. | Eschmann, Neil A; Do, Thanh D; LaPointe, Nichole E; Shea, Joan-Emma; Feinstein, Stuart C; Bowers, Michael T; Han, Songi | The journal of physical chemistry. B. | 26484390 | 2015 Nov 12; |
| Invited commentary: every good randomization deserves observation. | Westreich, Daniel; Edwards, Jessie K | American journal of epidemiology. | 26487342 | 2015 Nov 15; |
| Knockout of Lmod2 results in shorter thin filaments followed by dilated cardiomyopathy and juvenile lethality. | Pappas, Christopher T; Mayfield, Rachel M; Henderson, Christine; Jamilpour, Nima; Cover, Cathleen; Hernandez, Zachary; Hutchinson, Kirk R; Chu, Miensheng; Nam, Ki-Hwan; Valdez, Jose M; Wong, Pak Kin; Granzier, Henk L; Gregorio, Carol C | Proceedings of the National Academy of Sciences of the United States of America. | 26487682 | 2015 Nov 3; |
| Cystic Fibrosis Transmembrane Conductance Regulator in Sarcoplasmic Reticulum of Airway Smooth Muscle. Implications for Airway Contractility. | Cook, Daniel P; Rector, Michael V; Bouzek, Drake C; Michalski, Andrew S; Gansemer, Nicholas D; Reznikov, Leah R; Li, Xiaopeng; Stroik, Mallory R; Ostedgaard, Lynda S; Abou Alaiwa, Mahmoud H; Thompson, Michael A; Prakash, Y S; Krishnan, Ramaswamy; Meyerhol | American journal of respiratory and critical care medicine. | 26488271 | 2016 Feb 15; |
| Physics of Intracellular Organization in Bacteria. | Wingreen, Ned S; Huang, Kerwyn Casey | Annual review of microbiology. | 26488278 | 2015; |
| The Low Noise Limit in Gene Expression. | Dar, Roy D; Razooky, Brandon S; Weinberger, Leor S; Cox, Chris D; Simpson, Michael L | PloS one. | 26488303 | 2015; |
| Vitamin D Regulates Fatty Acid Composition in Subcutaneous Adipose Tissue Through Elovl3. | Ji, Lijuan; Gupta, Mihir; Feldman, Brian J | Endocrinology. | 26488808 | 2016 Jan; |
| The adherens junctions control susceptibility to Staphylococcus aureus ?-toxin. | Popov, Lauren M; Marceau, Caleb D; Starkl, Philipp M; Lumb, Jennifer H; Shah, Jimit; Guerrera, Diego; Cooper, Rachel L; Merakou, Christina; Bouley, Donna M; Meng, Wenxiang; Kiyonari, Hiroshi; Takeichi, Masatoshi; Galli, Stephen J; Bagnoli, Fabio; Citi, Sandra; Carette, Jan E; Amieva, Manuel R | Proceedings of the National Academy of Sciences of the United States of America. | 26489655 | 2015 Nov 17; |
| Whole-body tissue stabilization and selective extractions via tissue-hydrogel hybrids for high-resolution intact circuit mapping and phenotyping. | Treweek, Jennifer B; Chan, Ken Y; Flytzanis, Nicholas C; Yang, Bin; Deverman, Benjamin E; Greenbaum, Alon; Lignell, Antti; Xiao, Cheng; Cai, Long; Ladinsky, Mark S; Bjorkman, Pamela J; Fowlkes, Charless C; Gradinaru, Viviana | Nature protocols | 26492141 | 2015 Nov |
| Ubiquitylation of CD98 limits cell proliferation and clonal expansion. | Ablack, Jailal N G; Metz, Patrick J; Chang, John T; Cantor, Joseph M; Ginsberg, Mark H | Journal of cell science. | 26493331 | 2015 Dec 01; |
| Frequency-selective REDOR and spin-diffusion relays in uniformly labeled whole cells. | Rice, David M; Romaniuk, Joseph A H; Cegelski, Lynette | Solid state nuclear magnetic resonance. | 26493462 | 2015 Nov; |
| Resistance and tolerance to foreign elements by prokaryotic immune systems - curating the genome. | Goldberg, Gregory W; Marraffini, Luciano A | Nature reviews. Immunology. | 26494050 | 2015 Nov; |
| MHC variation sculpts individualized microbial communities that control susceptibility to enteric infection. | Kubinak, Jason L; Stephens, W Zac; Soto, Ray; Petersen, Charisse; Chiaro, Tyson; Gogokhia, Lasha; Bell, Rickesha; Ajami, Nadim J; Petrosino, Joseph F; Morrison, Linda; Potts, Wayne K; Jensen, Peter E; O'Connell, Ryan M; Round, June L | Nature communications. | 26494419 | 2015; |
| Hypomorphic mutations in TRNT1 cause retinitis pigmentosa with erythrocytic microcytosis. | DeLuca, Adam P; Whitmore, S Scott; Barnes, Jenna; Sharma, Tasneem P; Westfall, Trudi A; Scott, C Anthony; Weed, Matthew C; Wiley, Jill S; Wiley, Luke A; Johnston, Rebecca M; Schnieders, Michael J; Lentz, Steven R; Tucker, Budd A; Mullins, Robert F; Scheetz, Todd E; Stone, Edwin M; Slusarski, Diane C | Human molecular genetics. | 26494905 | 2016 Jan 01; |
| Smooth Muscle Stiffness Sensitivity is Driven by Soluble and Insoluble ECM Chemistry. | Herrick, William G; Rattan, Shruti; Nguyen, Thuy V; Grunwald, Michael S; Barney, Christopher W; Crosby, Alfred J; Peyton, Shelly R | Cellular and molecular bioengineering. | 26495043 | 2015 Sep 1; |
| Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes. | Sanborn, Adrian L; Rao, Suhas S P; Huang, Su-Chen; Durand, Neva C; Huntley, Miriam H; Jewett, Andrew I; Bochkov, Ivan D; Chinnappan, Dharmaraj; Cutkosky, Ashok; Li, Jian; Geeting, Kristopher P; Gnirke, Andreas; Melnikov, Alexandre; McKenna, Doug; Stamenova, Elena K; Lander, Eric S; Aiden, Erez Lieberman | Proceedings of the National Academy of Sciences of the United States of America | 26499245 | 2015 Nov 24 |
| Highly specific epigenome editing by CRISPR-Cas9 repressors for silencing of distal regulatory elements. | Thakore, Pratiksha I; D'Ippolito, Anthony M; Song, Lingyun; Safi, Alexias; Shivakumar, Nishkala K; Kabadi, Ami M; Reddy, Timothy E; Crawford, Gregory E; Gersbach, Charles A | Nature methods. | 26501517 | 2015 Dec; |
| Transportable, Chemical Genetic Methodology for the Small Molecule-Mediated Inhibition of Heat Shock Factor 1. | Moore, Christopher L; Dewal, Mahender B; Nekongo, Emmanuel E; Santiago, Sebasthian; Lu, Nancy B; Levine, Stuart S; Shoulders, Matthew D | ACS chemical biology | 26502114 | 2016 Jan 15 |
| Wall teichoic acids prevent antibody binding to epitopes within the cell wall of Staphylococcus aureus. | Gautam, Samir; Kim, Taehan; Lester, Evan; Deep, Deeksha; Spiegel, David A | ACS chemical biology. | 26502318 | 2016 Jan 15; |
| Bioengineering Human Myocardium on Native Extracellular Matrix. | Guyette, Jacques P; Charest, Jonathan M; Mills, Robert W; Jank, Bernhard J; Moser, Philipp T; Gilpin, Sarah E; Gershlak, Joshua R; Okamoto, Tatsuya; Gonzalez, Gabriel; Milan, David J; Gaudette, Glenn R; Ott, Harald C | Circulation research. | 26503464 | 2016 Jan 08; |
| Multiscale Estimation of Binding Kinetics Using Brownian Dynamics, Molecular Dynamics and Milestoning. | Votapka, Lane W; Amaro, Rommie E | PLoS computational biology. | 26505480 | 2015 Oct; |
| Low Resolution Data-Independent Acquisition in an LTQ-Orbitrap Allows for Simplified and Fully Untargeted Analysis of Histone Modifications. | Sidoli, Simone; Simithy, Johayra; Karch, Kelly R; Kulej, Katarzyna; Garcia, Benjamin A | Analytical chemistry. | 26505526 | 2015 Nov 17; |
| Ribosomal Proteins RPS11 and RPS20, Two Stress-Response Markers of Glioblastoma Stem Cells, Are Novel Predictors of Poor Prognosis in Glioblastoma Patients. | Yong, William H; Shabihkhani, Maryam; Telesca, Donatello; Yang, Shuai; Tso, Jonathan L; Menjivar, Jimmy C; Wei, Bowen; Lucey, Gregory M; Mareninov, Sergey; Chen, Zugen; Liau, Linda M; Lai, Albert; Nelson, Stanley F; Cloughesy, Timothy F; Tso, Cho-Lea | PloS one. | 26506620 | 2015; |
| Coupling between apical tension and basal adhesion allow epithelia to collectively sense and respond to substrate topography over long distances. | Broaders, Kyle E; Cerchiari, Alec E; Gartner, Zev J | Integrative biology : quantitative biosciences from nano to macro. | 26507156 | 2015 Dec 30; |
| A Method for Comprehensive Glycosite-Mapping and Direct Quantitation of Serum Glycoproteins. | Hong, Qiuting; Ruhaak, L Renee; Stroble, Carol; Parker, Evan; Huang, Jincui; Maverakis, Emanual; Lebrilla, Carlito B | Journal of proteome research. | 26510530 | 2015 Dec 4; |
| Bright, ''Clickable'' Porphyrins for the Visualization of Oxygenation under Ambient Light. | Roussakis, Emmanuel; Li, Zongxi; Nowell, Nicholas H; Nichols, Alexander J; Evans, Conor L | Angewandte Chemie (International ed. in English). | 26510549 | 2015 Dec 1; |
| High spatial resolution compressed sensing (HSPARSE) functional MRI. | Fang, Zhongnan; Van Le, Nguyen; Choy, ManKin; Lee, Jin Hyung | Magnetic resonance in medicine. | 26511101 | 2016 Aug; |
| Immunohistochemical Detection of Markers for Translational Studies of Lung Disease in Pigs and Humans. | Meyerholz, David K; Lambertz, Allyn M; Reznikov, Leah R; Ofori-Amanfo, Georgina K; Karp, Phil H; McCray Jr, Paul B; Welsh, Michael J; Stoltz, David A | Toxicologic pathology. | 26511846 | 2015 Oct 27; |
| Cationic surface modification of gold nanoparticles for enhanced cellular uptake and X-ray radiation therapy. | Wang, Chaoming; Sun, An; Qiao, Yong; Zhang, Peipei; Ma, Liyuan; Su, Ming | Journal of materials chemistry. B, Materials for biology and medicine. | 26512323 | 2015 Oct 7; |
| Cryopreservation and recovery of human endometrial epithelial cells with high viability, purity, and functional fidelity. | Chen, Joseph C; Hoffman, Jacquelyn R; Arora, Ripla; Perrone, Lila A; Gonzalez-Gomez, Christian J; Vo, Kim Chi; Laird, Diana J; Irwin, Juan C; Giudice, Linda C | Fertility and sterility. | 26515378 | 2016 Feb; |
| Tailoring Sub-Micron PLGA Particle Release Profiles via Centrifugal Fractioning. | Dutta, Dipankar; Salifu, Mariama; Sirianni, Rachael W; Stabenfeldt, Sarah E | Journal of biomedical materials research. Part A. | 26517011 | 2015 Oct 30; |
| Biomonitoring of human exposures to chlorinated derivatives and structural analogs of bisphenol A. | Andra, Syam S; Charisiadis, Pantelis; Arora, Manish; van Vliet-Ostaptchouk, Jana V; Makris, Konstantinos C | Environment international. | 26521216 | 2015 Dec; |
| Engineering intracellular biomineralization and biosensing by a magnetic protein. | Matsumoto, Yuri; Chen, Ritchie; Anikeeva, Polina; Jasanoff, Alan | Nature communications. | 26522873 | 2015; |
| Wnt/Notum spatial feedback inhibition controls neoblast differentiation to regulate reversible growth of the planarian brain. | Hill, Eric M; Petersen, Christian P | Development (Cambridge, England). | 26525673 | 2015 Dec 15; |
| Boron nitride nanotubes and nanoplatelets as reinforcing agents of polymeric matrices for bone tissue engineering. | Farshid, Behzad; Lalwani, Gaurav; Shir Mohammadi, Meisam; Simonsen, John; Sitharaman, Balaji | Journal of biomedical materials research. Part B, Applied biomaterials. | 26526153 | 2015 Nov 3; |
| Re-examination of Dietary Amino Acid Sensing Reveals a GCN2-Independent Mechanism. | Leib, David E; Knight, Zachary A | Cell reports. | 26526991 | 2015 Nov 10; |
| Transcriptomics Identify CD9 as a Marker of Murine IL-10-Competent Regulatory B Cells. | Sun, Jianbo; Wang, Jiguang; Pefanis, Evangelos; Chao, Jaime; Rothschild, Gerson; Tachibana, Isao; Chen, Jun Kui; Ivanov, Ivaylo I; Rabadan, Raul; Takeda, Yoshito; Basu, Uttiya | Cell reports. | 26527007 | 2015 Nov 10; |
| Magnetically-actuated, bead-enhanced silicon photonic immunosensor. | Valera, Enrique; McClellan, Melinda S; Bailey, Ryan C | Analytical methods : advancing methods and applications. | 26528374 | 2015 Oct 21; |
| A close look at axonal transport: Cargos slow down when crossing stationary organelles. | Che, Daphne L; Chowdary, Praveen D; Cui, Bianxiao | Neuroscience letters. | 26528790 | 2016 Jan 1; |
| Leaderless Transcripts and Small Proteins Are Common Features of the Mycobacterial Translational Landscape. | Shell, Scarlet S; Wang, Jing; Lapierre, Pascal; Mir, Mushtaq; Chase, Michael R; Pyle, Margaret M; Gawande, Richa; Ahmad, Rushdy; Sarracino, David A; Ioerger, Thomas R; Fortune, Sarah M; Derbyshire, Keith M; Wade, Joseph T; Gray, Todd A | PLoS genetics. | 26536359 | 2015 Nov; |
| Glycocalyx Remodeling with Glycopolymer-Based Proteoglycan Mimetics. | Huang, Mia L; Smith, Raymond A A; Trieger, Greg W; Godula, Kamil | Methods in molecular biology (Clifton, N.J.). | 26537476 | 2016; |
| Cell cycle Start is coupled to entry into the yeast metabolic cycle across diverse strains and growth rates. | Burnetti, Anthony J; Aydin, Mert; Buchler, Nicolas E | Molecular biology of the cell. | 26538026 | 2016 Jan 1; |
| The Crossroads of Synaptic Growth Signaling, Membrane Traffic and Neurological Disease: Insights from Drosophila. | Deshpande, Mugdha; Rodal, Avital A | Traffic (Copenhagen, Denmark). | 26538429 | 2016 Feb; |
| A Serotonin Circuit Acts as an Environmental Sensor to Mediate Midline Axon Crossing through EphrinB2. | Xing, Lingyan; Son, Jong-Hyun; Stevenson, Tamara J; Lillesaar, Christina; Bally-Cuif, Laure; Dahl, Tiffanie; Bonkowsky, Joshua L | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 26538650 | 2015 Nov 4; |
| X chromosome reactivation in reprogramming and in development. | Pasque, Vincent; Plath, Kathrin | Current opinion in cell biology. | 26540406 | 2015 Dec; |
| Self-affirmation activates brain systems associated with self-related processing and reward and is reinforced by future orientation. | Cascio, Christopher N; O'Donnell, Matthew Brook; Tinney, Francis J; Lieberman, Matthew D; Taylor, Shelley E; Strecher, Victor J; Falk, Emily B | Social cognitive and affective neuroscience. | 26541373 | 2016 Apr; |
| Redefining the BH3 Death Domain as a 'Short Linear Motif'. | Aouacheria, Abdel; Combet, Christophe; Tompa, Peter; Hardwick, J Marie | Trends in biochemical sciences. | 26541461 | 2015 Dec; |
| Single-cell transcriptomics reveals receptor transformations during olfactory neurogenesis. | Hanchate, Naresh K; Kondoh, Kunio; Lu, Zhonghua; Kuang, Donghui; Ye, Xiaolan; Qiu, Xiaojie; Pachter, Lior; Trapnell, Cole; Buck, Linda B | Science (New York, N.Y.). | 26541607 | 2015 Dec 4; |
| Nitric Oxide Regulates Gene Expression in Cancers by Controlling Histone Posttranslational Modifications. | Vasudevan, Divya; Hickok, Jason R; Bovee, Rhea C; Pham, Vy; Mantell, Lin L; Bahroos, Neil; Kanabar, Pinal; Cao, Xing-Jun; Maienschein-Cline, Mark; Garcia, Benjamin A; Thomas, Douglas D | Cancer research. | 26542213 | 2015 Dec 15; |
| Dynamics and Interactions of Individual Proteins in the Membrane of Single, Living Cells. | Anthony, Stephen; Carroll-Portillo, Amanda; Timlin, Jerilyn | Methods in molecular biology (Clifton, N.J.). | 26542723 | 2015; |
| Forces, fluctuations, and self-organization in the nucleus. | Pederson, Thoru; King, Megan C; Marko, John F | Molecular biology of the cell. | 26543199 | 2015 Nov 5; |
| Utilizing a Personal Smartphone Custom App to Assess the Patient Health Questionnaire-9 (PHQ-9) Depressive Symptoms in Patients With Major Depressive Disorder. | Torous, John; Staples, Patrick; Shanahan, Meghan; Lin, Charlie; Peck, Pamela; Keshavan, Matcheri; Onnela, Jukka-Pekka | JMIR mental health. | 26543914 | 2015 Jan-Mar; |
| Mechanisms of Toll-like Receptor 4 Endocytosis Reveal a Common Immune-Evasion Strategy Used by Pathogenic and Commensal Bacteria. | Tan, Yunhao; Zanoni, Ivan; Cullen, Thomas W; Goodman, Andrew L; Kagan, Jonathan C | Immunity. | 26546281 | 2015 Nov 17; |
| Bone morphogenetic protein 7 sensitizes O6-methylguanine methyltransferase expressing-glioblastoma stem cells to clinically relevant dose of temozolomide. | Tso, Jonathan L; Yang, Shuai; Menjivar, Jimmy C; Yamada, Kazunari; Zhang, Yibei; Hong, Irene; Bui, Yvonne; Stream, Alexandra; McBride, William H; Liau, Linda M; Nelson, Stanley F; Cloughesy, Timothy F; Yong, William H; Lai, Albert; Tso, Cho-Lea | Molecular cancer. | 26546412 | 2015 Nov 06; |
| Identification of Genes Conferring Tolerance to Lignocellulose-Derived Inhibitors by Functional Selections in Soil Metagenomes. | Forsberg, Kevin J; Patel, Sanket; Witt, Evan; Wang, Bin; Ellison, Tyler D; Dantas, Gautam | Applied and environmental microbiology | 26546427 | 2016 Jan 15 |
| Identification of bacterial sRNA regulatory targets using ribosome profiling. | Wang, Jing; Rennie, William; Liu, Chaochun; Carmack, Charles S; Prévost, Karine; Caron, Marie-Pier; Massé, Eric; Ding, Ye; Wade, Joseph T | Nucleic acids research. | 26546513 | 2015 Dec 2; |
| Health and Economic Implications of National Treatment Coverage for Cardiovascular Disease in India: Cost-Effectiveness Analysis. | Basu, Sanjay; Bendavid, Eran; Sood, Neeraj | Circulation. Cardiovascular quality and outcomes. | 26555122 | 2015 Dec; |
| A retrograde adeno-associated virus for collecting ribosome-bound mRNA from anatomically defined projection neurons. | Cook-Snyder, Denise R; Jones, Alexander; Reijmers, Leon G | Frontiers in molecular neuroscience. | 26557053 | 2015; |
| A large scale prediction of bacteriocin gene blocks suggests a wide functional spectrum for bacteriocins. | Morton, James T; Freed, Stefan D; Lee, Shaun W; Friedberg, Iddo | BMC bioinformatics. | 26558535 | 2015; |
| Discovery in Droplets. | Price, Alexander K; Paegel, Brian M | Analytical chemistry. | 26558892 | 2016 Jan 5; |
| Cognitive function in cancer survivors: analysis of the 1999-2002 National Health and Nutrition Examination Survey. | Williams, A M; Janelsins, M C; van Wijngaarden, E | Supportive care in cancer : official journal of the Multinational Association of Supportive Care in Cancer. | 26559193 | 2015 Nov 9; |
| MYC-induced reprogramming of glutamine catabolism supports optimal virus replication. | Thai, Minh; Thaker, Shivani K; Feng, Jun; Du, Yushen; Hu, Hailiang; Ting Wu, Ting; Graeber, Thomas G; Braas, Daniel; Christofk, Heather R | Nature communications. | 26561297 | 2015; |
| Dynamic Redox Regulation of IL-4 Signaling. | Dwivedi, Gaurav; Gran, Margaret A; Bagchi, Pritha; Kemp, Melissa L | PLoS computational biology. | 26562652 | 2015 Nov; |
| Molecular response of chorioretinal endothelial cells to complement injury: implications for macular degeneration. | Zeng, Shemin; Whitmore, S Scott; Sohn, Elliott H; Riker, Megan J; Wiley, Luke A; Scheetz, Todd E; Stone, Edwin M; Tucker, Budd A; Mullins, Robert F | The Journal of pathology. | 26564985 | 2016 Feb; |
| A forward genetic screen reveals novel independent regulators of ULBP1, an activating ligand for natural killer cells. | Gowen, Benjamin G; Chim, Bryan; Marceau, Caleb D; Greene, Trever T; Burr, Patrick; Gonzalez, Jeanmarie R; Hesser, Charles R; Dietzen, Peter A; Russell, Teal; Iannello, Alexandre; Coscoy, Laurent; Sentman, Charles L; Carette, Jan E; Muljo, Stefan A; Raulet, David H | eLife | 26565589 | 2015 Nov 13 |
| Hydrogel Pore-Size Modulation for Enhanced Single-Cell Western Blotting. | Duncombe, Todd A; Kang, Chi-Chih; Maity, Santanu; Ward, Toby M; Pegram, Mark D; Murthy, Niren; Herr, Amy E | Advanced materials (Deerfield Beach, Fla.). | 26567472 | 2016 Jan; |
| Scalable amplification of strand subsets from chip-synthesized oligonucleotide libraries. | Schmidt, Thorsten L; Beliveau, Brian J; Uca, Yavuz O; Theilmann, Mark; Da Cruz, Felipe; Wu, Chao-Ting; Shih, William M | Nature communications. | 26567534 | 2015; |
| Machine Learning in Medicine. | Deo, Rahul C | Circulation. | 26572668 | 2015 Nov 17; |
| Efficient Calculation of Accurate Reaction Energies-Assessment of Different Models in Electronic Structure Theory. | Friedrich, Joachim | Journal of chemical theory and computation. | 26574443 | 2015 Aug 11; |
| Progress and challenges for chemical probing of RNA structure inside living cells. | Kubota, Miles; Tran, Catherine; Spitale, Robert C | Nature chemical biology. | 26575240 | 2015 Dec; |
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| The clinical impact of recent advances in LC-MS for cancer biomarker discovery and verification. | Wang, Hui; Shi, Tujin; Qian, Wei-Jun; Liu, Tao; Kagan, Jacob; Srivastava, Sudhir; Smith, Richard D; Rodland, Karin D; Camp 2nd, David G | Expert review of proteomics. | 26581546 | 2016; |
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| High Performance All-Solid-State Flexible Micro-Pseudocapacitor Based on Hierarchically Nanostructured Tungsten Trioxide Composite. | Huang, Xuezhen; Liu, Hewei; Zhang, Xi; Jiang, Hongrui | ACS applied materials & interfaces. | 26618406 | 2015 Dec 23; |
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| The Binding Interface between Human APOBEC3F and HIV-1 Vif Elucidated by Genetic and Computational Approaches. | Richards, Christopher; Albin, John S; Demir, Özlem; Shaban, Nadine M; Luengas, Elizabeth M; Land, Allison M; Anderson, Brett D; Holten, John R; Anderson, John S; Harki, Daniel A; Amaro, Rommie E; Harris, Reuben S | Cell reports | 26628363 | 2015 Dec 01 |
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| In vivo genome editing improves muscle function in a mouse model of Duchenne muscular dystrophy. | Nelson, Christopher E; Hakim, Chady H; Ousterout, David G; Thakore, Pratiksha I; Moreb, Eirik A; Castellanos Rivera, Ruth M; Madhavan, Sarina; Pan, Xiufang; Ran, F Ann; Yan, Winston X; Asokan, Aravind; Zhang, Feng; Duan, Dongsheng; Gersbach, Charles A | Science (New York, N.Y.). | 26721684 | 2016 Jan 22; |
| In vivo gene editing in dystrophic mouse muscle and muscle stem cells. | Tabebordbar, Mohammadsharif; Zhu, Kexian; Cheng, Jason K W; Chew, Wei Leong; Widrick, Jeffrey J; Yan, Winston X; Maesner, Claire; Wu, Elizabeth Y; Xiao, Ru; Ran, F Ann; Cong, Le; Zhang, Feng; Vandenberghe, Luk H; Church, George M; Wagers, Amy J | Science (New York, N.Y.). | 26721686 | 2016 Jan 22; |
| Epigenetic (re)programming of caste-specific behavior in the ant Camponotus floridanus. | Simola, Daniel F; Graham, Riley J; Brady, Cristina M; Enzmann, Brittany L; Desplan, Claude; Ray, Anandasankar; Zwiebel, Laurence J; Bonasio, Roberto; Reinberg, Danny; Liebig, Jürgen; Berger, Shelley L | Science (New York, N.Y.). | 26722000 | 2016 Jan 1; |
| Prefrontal cortical regulation of brainwide circuit dynamics and reward-related behavior. | Ferenczi, Emily A; Zalocusky, Kelly A; Liston, Conor; Grosenick, Logan; Warden, Melissa R; Amatya, Debha; Katovich, Kiefer; Mehta, Hershel; Patenaude, Brian; Ramakrishnan, Charu; Kalanithi, Paul; Etkin, Amit; Knutson, Brian; Glover, Gary H; Deisseroth, Ka | Science (New York, N.Y.). | 26722001 | 2016 Jan 01; |
| ICAM-1-Targeted, Lcn2 siRNA-Encapsulating Liposomes are Potent Anti-angiogenic Agents for Triple Negative Breast Cancer. | Guo, Peng; Yang, Jiang; Jia, Di; Moses, Marsha A; Auguste, Debra T | Theranostics | 26722369 | 2016 |
| Cyclic Mechanical Loading Is Essential for Rac1-Mediated Elongation and Remodeling of the Embryonic Mitral Valve. | Gould, Russell A; Yalcin, Huseyin C; MacKay, Joanna L; Sauls, Kimberly; Norris, Russell; Kumar, Sanjay; Butcher, Jonathan T | Current biology : CB. | 26725196 | 2016 Jan 11; |
| Uncovering system-specific stress signatures in primate teeth with multimodal imaging. | Austin, Christine; Smith, Tanya M; Farahani, Ramin M Z; Hinde, Katie; Carter, Elizabeth A; Lee, Joonsup; Lay, Peter A; Kennedy, Brendan J; Sarrafpour, Babak; Wright, Rosalind J; Wright, Robert O; Arora, Manish | Scientific reports. | 26727334 | 2016 Jan 04; |
| Transgenic FingRs for Live Mapping of Synaptic Dynamics in Genetically-Defined Neurons. | Son, Jong-Hyun; Keefe, Matthew D; Stevenson, Tamara J; Barrios, Joshua P; Anjewierden, Scott; Newton, James B; Douglass, Adam D; Bonkowsky, Joshua L | Scientific reports. | 26728131 | 2016; |
| Cortical PAR polarity proteins promote robust cytokinesis during asymmetric cell division. | Jordan, Shawn N; Davies, Tim; Zhuravlev, Yelena; Dumont, Julien; Shirasu-Hiza, Mimi; Canman, Julie C | The Journal of cell biology. | 26728855 | 2016 Jan 4; |
| A microfluidic platform enabling single-cell RNA-seq of multigenerational lineages. | Kimmerling, Robert J; Lee Szeto, Gregory; Li, Jennifer W; Genshaft, Alex S; Kazer, Samuel W; Payer, Kristofor R; de Riba Borrajo, Jacob; Blainey, Paul C; Irvine, Darrell J; Shalek, Alex K; Manalis, Scott R | Nature communications | 26732280 | 2016 Jan 06 |
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| KCC2 rescues functional deficits in human neurons derived from patients with Rett syndrome. | Tang, Xin; Kim, Julie; Zhou, Li; Wengert, Eric; Zhang, Lei; Wu, Zheng; Carromeu, Cassiano; Muotri, Alysson R; Marchetto, Maria C N; Gage, Fred H; Chen, Gong | Proceedings of the National Academy of Sciences of the United States of America. | 26733678 | 2016 Jan 19; |
| An enhanced cerebral recovery index for coma prognostication following cardiac arrest. | Ghassemi, Mohammad M; Amorim, Edilberto; Pati, Sandipan B; Mark, Roger G; Brown, Emery N; Purdon, Patrick L; Westover, M Brandon | Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference | 26736317 | 2015 |
| A comparison of ERP spatial filtering methods for optimal mental workload estimation. | Roy, Raphaelle N; Bonnet, Stephane; Charbonnier, Sylvie; Jallon, Pierre; Campagne, Aurelie | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 26737966 | 2015; |
| Clustering analysis to identify distinct spectral components of encephalogram burst suppression in critically ill patients. | Zhou, David W; Westover, M Brandon; McClain, Lauren M; Nagaraj, Sunil B; Bajwa, Ednan K; Quraishi, Sadeq A; Akeju, Oluwaseun; Cobb, J Perren; Purdon, Patrick L | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 26737967 | 2015; |
| Spatial variation in automated burst suppression detection in pharmacologically induced coma. | An, Jingzhi; Jonnalagadda, Durga; Moura, Valdery; Purdon, Patrick L; Brown, Emery N; Westover, M Brandon | Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference | 26738009 | 2015 |
| Sex-specific silencing of X-linked genes by Xist RNA. | Gayen, Srimonta; Maclary, Emily; Hinten, Michael; Kalantry, Sundeep | Proceedings of the National Academy of Sciences of the United States of America. | 26739568 | 2016 Jan 19; |
| Human iPS Cell-Derived Neurons Uncover the Impact of Increased Ras Signaling in Costello Syndrome. | Rooney, Gemma E; Goodwin, Alice F; Depeille, Philippe; Sharir, Amnon; Schofield, Claude M; Yeh, Erika; Roose, Jeroen P; Klein, Ophir D; Rauen, Katherine A; Weiss, Lauren A; Ullian, Erik M | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 26740656 | 2016 Jan 6; |
| Atomic structure of the 26S proteasome lid reveals the mechanism of deubiquitinase inhibition. | Dambacher, Corey M; Worden, Evan J; Herzik, Mark A; Martin, Andreas; Lander, Gabriel C | eLife. | 26744777 | 2016 Jan 08; |
| Mechanical Characterization of a Dynamic and Tunable Methacrylated Hyaluronic Acid Hydrogel. | Ondeck, Matthew G; Engler, Adam J | Journal of biomechanical engineering. | 26746491 | 2016 Feb; |
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| Tracking Down Response and Resistance to TRK Inhibitors. | Okimoto, Ross A; Bivona, Trever G | Cancer discovery. | 26747892 | 2016 Jan; |
| The Path of Least Resistance: Mechanisms to Reduce Influenza's Sensitivity to Oseltamivir. | Phillips, Angela M; Shoulders, Matthew D | Journal of molecular biology | 26748011 | 2016 Feb 13 |
| period-Regulated Feeding Behavior and TOR Signaling Modulate Survival of Infection. | Allen, Victoria W; O'Connor, Reed M; Ulgherait, Matthew; Zhou, Clarice G; Stone, Elizabeth F; Hill, Vanessa M; Murphy, Keith R; Canman, Julie C; Ja, William W; Shirasu-Hiza, Mimi M | Current biology : CB. | 26748856 | 2016 Jan 25; |
| Interrogating cellular fate decisions with high-throughput arrays of multiplexed cellular communities. | Chen, Sisi; Bremer, Andrew W; Scheideler, Olivia J; Na, Yun Suk; Todhunter, Michael E; Hsiao, Sonny; Bomdica, Prithvi R; Maharbiz, Michel M; Gartner, Zev J; Schaffer, David V | Nature communications. | 26754526 | 2016 Jan 12; |
| Genome-editing Technologies for Gene and Cell Therapy. | Maeder, Morgan L; Gersbach, Charles A | Molecular therapy : the journal of the American Society of Gene Therapy. | 26755333 | 2016 Mar; |
| Impact of Different Target Sequences on Type III CRISPR-Cas Immunity. | Maniv, Inbal; Jiang, Wenyan; Bikard, David; Marraffini, Luciano A | Journal of bacteriology. | 26755632 | 2016 Mar; |
| Cockayne syndrome-derived neurons display reduced synapse density and altered neural network synchrony. | Vessoni, Alexandre T; Herai, Roberto H; Karpiak, Jerome V; Leal, Angelica M S; Trujillo, Cleber A; Quinet, Annabel; Agnez Lima, Lucymara F; Menck, Carlos F M; Muotri, Alysson R | Human molecular genetics. | 26755826 | 2016 Apr 01; |
| A synergistic approach to the design, fabrication and evaluation of 3D printed micro and nano featured scaffolds for vascularized bone tissue repair. | Holmes, Benjamin; Bulusu, Kartik; Plesniak, Michael; Zhang, Lijie Grace | Nanotechnology. | 26758780 | 2016 Feb 12; |
| A Stable Pyrophosphoserine Analog for Incorporation into Peptides and Proteins. | Yates, Lisa M; Fiedler, Dorothea | ACS chemical biology. | 26760216 | 2016 Apr 15; |
| Biomechanical and biochemical regulation of cathepsin K expression in endothelial cells converge at AP-1 and NF-?B. | Keegan, Philip M; Anbazhakan, Suhaas; Kang, Baolin; Pace, Betty S; Platt, Manu O | Biological chemistry. | 26760306 | 2016 May; |
| Alternative Strategies to Achieve Cardiovascular Mortality Goals in China and India: A Microsimulation of Target- Versus Risk-Based Blood Pressure Treatment. | Basu, Sanjay; Yudkin, John S; Sussman, Jeremy B; Millett, Christopher; Hayward, Rodney A | Circulation. | 26762520 | 2016 Mar 1; |
| Role of DNA binding sites and slow unbinding kinetics in titration-based oscillators. | Karapetyan, Sargis; Buchler, Nicolas E | Physical review. E, Statistical, nonlinear, and soft matter physics. | 26764732 | 2015 Dec; |
| Regulation of Asymmetric Division by Atypical Protein Kinase C Influences Early Specification of CD8(+) T Lymphocyte Fates. | Metz, Patrick J; Lopez, Justine; Kim, Stephanie H; Akimoto, Kazunori; Ohno, Shigeo; Chang, John T | Scientific reports. | 26765121 | 2016 Jan 14; |
| Within-Host Heterogeneity of Mycobacterium tuberculosis Infection Is Associated With Poor Early Treatment Response: A Prospective Cohort Study. | Cohen, Ted; Chindelevitch, Leonid; Misra, Reshma; Kempner, Maria E; Galea, Jerome; Moodley, Prashini; Wilson, Douglas | The Journal of infectious diseases. | 26768249 | 2016 Jun 01; |
| Graphene-based platforms for cancer therapeutics. | Patel, Sunny C; Lee, Stephen; Lalwani, Gaurav; Suhrland, Cassandra; Chowdhury, Sayan Mullick; Sitharaman, Balaji | Therapeutic delivery. | 26769305 | 2016; |
| Force Feedback Controls Motor Activity and Mechanical Properties of Self-Assembling Branched Actin Networks. | Bieling, Peter; Li, Tai-De; Weichsel, Julian; McGorty, Ryan; Jreij, Pamela; Huang, Bo; Fletcher, Daniel A; Mullins, R Dyche | Cell. | 26771487 | 2016 Jan 14; |
| The effect of antiretroviral therapy on all-cause mortality, generalized to persons diagnosed with HIV in the USA, 2009-11. | Lesko, Catherine R; Cole, Stephen R; Hall, H Irene; Westreich, Daniel; Miller, William C; Eron, Joseph J; Li, Jianmin; Mugavero, Michael J; CNICS Investigators | International journal of epidemiology. | 26772869 | 2016 Feb; |
| Motor Behavior Mediated by Continuously Generated Dopaminergic Neurons in the Zebrafish Hypothalamus Recovers after Cell Ablation. | McPherson, Adam D; Barrios, Joshua P; Luks-Morgan, Sasha J; Manfredi, John P; Bonkowsky, Joshua L; Douglass, Adam D; Dorsky, Richard I | Current biology : CB. | 26774784 | 2016 Jan 25; |
| Getting Personal About Nutrition. | Noecker, Cecilia; Borenstein, Elhanan | Trends in molecular medicine. | 26776092 | 2016 Feb; |
| Intravesical and alternative bladder-preservation therapies in the management of non-muscle-invasive bladder cancer unresponsive to bacillus Calmette-Guérin. | Steinberg, Ryan L; Thomas, Lewis J; Nepple, Kenneth G | Urologic oncology. | 26777259 | 2016 Jun; |
| Ligand Activation of ERR? by Cholesterol Mediates Statin and Bisphosphonate Effects. | Wei, Wei; Schwaid, Adam G; Wang, Xueqian; Wang, Xunde; Chen, Shili; Chu, Qian; Saghatelian, Alan; Wan, Yihong | Cell metabolism. | 26777690 | 2016 Jan 12; |
| The distribution of cutaneous metastases correlates with local immunologic milieu. | Schulman, Joshua M; Pauli, Mariela L; Neuhaus, Isaac M; Sanchez Rodriguez, Roberto; Taravati, Keyon; Shin, Uk Sok; McCalmont, Timothy H; Rosenblum, Michael D | Journal of the American Academy of Dermatology. | 26778012 | 2016 Mar; |
| Cryo-electron microscopy structure of the TRPV2 ion channel. | Zubcevic, Lejla; Herzik Jr, Mark A; Chung, Ben C; Liu, Zhirui; Lander, Gabriel C; Lee, Seok-Yong | Nature structural & molecular biology | 26779611 | 2016 Feb |
| Interactions of the Immune System with Skin and Bone Tissue in Psoriatic Arthritis: A Comprehensive Review. | Sukhov, Andrea; Adamopoulos, Iannis E; Maverakis, Emanual | Clinical reviews in allergy & immunology. | 26780035 | 2016 Aug; |
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| Harnessing Redox Cross-Reactivity To Profile Distinct Cysteine Modifications. | Majmudar, Jaimeen D; Konopko, Aaron M; Labby, Kristin J; Tom, Christopher T M B; Crellin, John E; Prakash, Ashesh; Martin, Brent R | Journal of the American Chemical Society. | 26780921 | 2016 Feb 17; |
| PKLR promotes colorectal cancer liver colonization through induction of glutathione synthesis. | Nguyen, Alexander; Loo, Jia Min; Mital, Rohit; Weinberg, Ethan M; Man, Fung Ying; Zeng, Zhaoshi; Paty, Philip B; Saltz, Leonard; Janjigian, Yelena Y; de Stanchina, Elisa; Tavazoie, Sohail F | The Journal of clinical investigation. | 26784545 | 2016 Feb; |
| Reduced Blood Coagulation on Roll-to-Roll, Shrink-Induced Superhydrophobic Plastics. | Nokes, Jolie M; Liedert, Ralph; Kim, Monica Y; Siddiqui, Ali; Chu, Michael; Lee, Eugene K; Khine, Michelle | Advanced healthcare materials. | 26784916 | 2016 Mar 09; |
| Chemical Inhibition of Kynureninase Reduces Pseudomonas aeruginosa Quorum Sensing and Virulence Factor Expression. | Kasper, Stephen H; Bonocora, Richard P; Wade, Joseph T; Musah, Rabi Ann; Cady, Nathaniel C | ACS chemical biology. | 26785289 | 2016 Apr 15; |
| Processes for design, construction and utilisation of arrays of light-emitting diodes and light-emitting diode-coupled optical fibres for multi-site brain light delivery. | Bernstein, Jacob G; Allen, Brian D; Guerra, Alexander A; Boyden, Edward S | Journal of engineering (Stevenage, England). | 26798482 | 2015 May; |
| Phosphate starvation: a novel signal that triggers ESX-5 secretion in Mycobacterium tuberculosis. | Elliott, Sarah R; Tischler, Anna D | Molecular microbiology. | 26800324 | 2016 May; |
| Correlation between Activity and Domain Complementation in Adenylyl Cyclase Demonstrated with a Novel Fluorescence Resonance Energy Transfer Sensor. | Ritt, Michael; Sivaramakrishnan, Sivaraj | Molecular pharmacology. | 26801393 | 2016 Apr; |
| Mode of action and resistance studies unveil new roles for tropodithietic acid as an anticancer agent and the ?-glutamyl cycle as a proton sink. | Wilson, Maxwell Z; Wang, Rurun; Gitai, Zemer; Seyedsayamdost, Mohammad R | Proceedings of the National Academy of Sciences of the United States of America. | 26802120 | 2016 Feb 9; |
| Torsin ATPases: structural insights and functional perspectives. | Laudermilch, Ethan; Schlieker, Christian | Current opinion in cell biology. | 26803745 | 2016 Jan 21; |
| Robust DNA Methylation in the Clonal Raider Ant Brain. | Libbrecht, Romain; Oxley, Peter Robert; Keller, Laurent; Kronauer, Daniel Jan Christoph | Current biology : CB. | 26804553 | 2016 Feb 8; |
| Induction of Calcium Influx in Cortical Neural Networks by Nanomagnetic Forces. | Tay, Andy; Kunze, Anja; Murray, Coleman; Di Carlo, Dino | ACS nano. | 26805612 | 2016 Feb 23; |
| Trehalose-Based Block Copolycations Promote Polyplex Stabilization for Lyophilization and in Vivo pDNA Delivery. | Tolstyka, Zachary P; Phillips, Haley; Cortez, Mallory; Wu, Yaoying; Ingle, Nilesh; Bell, Jason B; Hackett, Perry B; Reineke, Theresa M | ACS biomaterials science & engineering. | 26807438 | 2016 Jan 11; |
| Acidic pH increases airway surface liquid viscosity in cystic fibrosis. | Tang, Xiao Xiao; Ostedgaard, Lynda S; Hoegger, Mark J; Moninger, Thomas O; Karp, Philip H; McMenimen, James D; Choudhury, Biswa; Varki, Ajit; Stoltz, David A; Welsh, Michael J | The Journal of clinical investigation. | 26808501 | 2016 Mar 01; |
| Peroxisomes move by hitchhiking on early endosomes using the novel linker protein PxdA. | Salogiannis, John; Egan, Martin J; Reck-Peterson, Samara L | The Journal of cell biology | 26811422 | 2016 Feb 01 |
| Rapid Metal -free Macromolecular Coupling via in situ Nitrile Oxide-Activated Alkene Cycloaddition. | Isaacman, Michael J; Cui, Weibin; Theogarajan, Luke S | Journal of polymer science. Part A, Polymer chemistry. | 26811566 | 2014 Nov 1; |
| A survey of best practices for RNA-seq data analysis. | Conesa, Ana; Madrigal, Pedro; Tarazona, Sonia; Gomez-Cabrero, David; Cervera, Alejandra; McPherson, Andrew; Szcze?niak, Micha? Wojciech; Gaffney, Daniel J; Elo, Laura L; Zhang, Xuegong; Mortazavi, Ali | Genome biology. | 26813401 | 2016 Jan 26; |
| Proteome-wide analysis reveals widespread lysine acetylation of major protein complexes in the malaria parasite. | Cobbold, Simon A; Santos, Joana M; Ochoa, Alejandro; Perlman, David H; Llinás, Manuel | Scientific reports. | 26813983 | 2016 Jan 27; |
| An essential receptor for adeno-associated virus infection. | Pillay, S; Meyer, N L; Puschnik, A S; Davulcu, O; Diep, J; Ishikawa, Y; Jae, L T; Wosen, J E; Nagamine, C M; Chapman, M S; Carette, J E | Nature. | 26814968 | 2016 Feb 4; |
| h?SABR: Photochemical Dose-Response Bead Screening in Droplets. | Price, Alexander K; MacConnell, Andrew B; Paegel, Brian M | Analytical chemistry. | 26815064 | 2016 Mar 1; |
| High Throughput Label Free Measurement of Cancer Cell Adhesion Kinetics Under Hemodynamic Flow. | Spencer, Adrianne; Baker, Aaron B | Scientific reports. | 26816215 | 2016 Jan 27; |
| Harnessing Smartphone-Based Digital Phenotyping to Enhance Behavioral and Mental Health. | Onnela, Jukka-Pekka; Rauch, Scott L | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology. | 26818126 | 2016 Jun; |
| Editing the epigenome: technologies for programmable transcription and epigenetic modulation. | Thakore, Pratiksha I; Black, Joshua B; Hilton, Isaac B; Gersbach, Charles A | Nature methods. | 26820547 | 2016 Feb; |
| Signatures of early frailty in the gut microbiota. | Jackson, Matthew A; Jackson, Matt; Jeffery, Ian B; Beaumont, Michelle; Bell, Jordana T; Clark, Andrew G; Ley, Ruth E; O'Toole, Paul W; Spector, Tim D; Steves, Claire J | Genome medicine. | 26822992 | 2016 Jan 29; |
| Airway acidification initiates host defense abnormalities in cystic fibrosis mice. | Shah, Viral S; Meyerholz, David K; Tang, Xiao Xiao; Reznikov, Leah; Abou Alaiwa, Mahmoud; Ernst, Sarah E; Karp, Philip H; Wohlford-Lenane, Christine L; Heilmann, Kristopher P; Leidinger, Mariah R; Allen, Patrick D; Zabner, Joseph; McCray Jr, Paul B; Ostedgaard, Lynda S; Stoltz, David A; Randak, Christoph O; Welsh, Michael J | Science (New York, N.Y.). | 26823428 | 2016 Jan 29; |
| A zebrafish melanoma model reveals emergence of neural crest identity during melanoma initiation. | Kaufman, Charles K; Mosimann, Christian; Fan, Zi Peng; Yang, Song; Thomas, Andrew J; Ablain, Julien; Tan, Justin L; Fogley, Rachel D; van Rooijen, Ellen; Hagedorn, Elliott J; Ciarlo, Christie; White, Richard M; Matos, Dominick A; Puller, Ann-Christin; Santoriello, Cristina; Liao, Eric C; Young, Richard A; Zon, Leonard I | Science (New York, N.Y.). | 26823433 | 2016 Jan 29; |
| DAZL and CPEB1 regulate mRNA translation synergistically during oocyte maturation. | Sousa Martins, Joao P; Liu, Xueqing; Oke, Ashwini; Arora, Ripla; Franciosi, Federica; Viville, Stephan; Laird, Diana J; Fung, Jennifer C; Conti, Marco | Journal of cell science. | 26826184 | 2016 Mar 15; |
| Cutting Edge: Regulatory T Cells Facilitate Cutaneous Wound Healing. | Nosbaum, Audrey; Prevel, Nicolas; Truong, Hong-An; Mehta, Pooja; Ettinger, Monika; Scharschmidt, Tiffany C; Ali, Niwa H; Pauli, Mariela L; Abbas, Abul K; Rosenblum, Michael D | Journal of immunology (Baltimore, Md. : 1950). | 26826250 | 2016 Mar 1; |
| Epithelial cell fate in the nephron tubule is mediated by the ETS transcription factors etv5a and etv4 during zebrafish kidney development. | Marra, Amanda N; Wingert, Rebecca A | Developmental biology. | 26827902 | 2016 Jan 29; |
| Corynebacterium glutamicum Metabolic Engineering with CRISPR Interference (CRISPRi). | Cleto, Sara; Jensen, Jaide Vk; Wendisch, Volker F; Lu, Timothy K | ACS synthetic biology. | 26829286 | 2016 May 20; |
| Cre-dependent selection yields AAV variants for widespread gene transfer to the adult brain. | Deverman, Benjamin E; Pravdo, Piers L; Simpson, Bryan P; Kumar, Sripriya Ravindra; Chan, Ken Y; Banerjee, Abhik; Wu, Wei-Li; Yang, Bin; Huber, Nina; Pasca, Sergiu P; Gradinaru, Viviana | Nature biotechnology. | 26829320 | 2016 Feb; |
| ClassTR: Classifying Within-Host Heterogeneity Based on Tandem Repeats with Application to Mycobacterium tuberculosis Infections. | Chindelevitch, Leonid; Colijn, Caroline; Moodley, Prashini; Wilson, Douglas; Cohen, Ted | PLoS computational biology. | 26829497 | 2016 Feb; |
| Secondary Metabolic Pathway-Targeted Metabolomics. | Vizcaino, Maria I; Crawford, Jason M | Methods in molecular biology (Clifton, N.J.). | 26831709 | 2016; |
| Analyzing the relationship between decorrelation time and tissue thickness in acute rat brain slices using multispeckle diffusing wave spectroscopy. | Brake, Joshua; Jang, Mooseok; Yang, Changhuei | Journal of the Optical Society of America. A, Optics, image science, and vision. | 26831778 | 2016 Feb 01; |
| Hybrid promiscuous (Hypr) GGDEF enzymes produce cyclic AMP-GMP (3', 3'-cGAMP). | Hallberg, Zachary F; Wang, Xin C; Wright, Todd A; Nan, Beiyan; Ad, Omer; Yeo, Jongchan; Hammond, Ming C | Proceedings of the National Academy of Sciences of the United States of America. | 26839412 | 2016 Feb 16; |
| EBF2 promotes the recruitment of beige adipocytes in white adipose tissue. | Stine, Rachel R; Shapira, Suzanne N; Lim, Hee-Woong; Ishibashi, Jeff; Harms, Matthew; Won, Kyoung-Jae; Seale, Patrick | Molecular metabolism. | 26844207 | 2016 Jan; |
| Sensorimotor Transformations Underlying Variability in Song Intensity during Drosophila Courtship. | Coen, Philip; Xie, Marjorie; Clemens, Jan; Murthy, Mala | Neuron. | 26844835 | 2016 Feb 3; |
| Multielemental bioimaging of tissues in children's environmental health research. | Austin, Christine; Niedzwiecki, Megan M; Arora, Manish | Current opinion in pediatrics. | 26845145 | 2016 Apr; |
| Label-free detection and manipulation of single biological nanoparticles. | DeSantis, Michael C; Cheng, Wei | Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology. | 26846164 | 2016 Sep; |
| Histone H4 acetylation and the epigenetic reader Brd4 are critical regulators of pluripotency in embryonic stem cells. | Gonzales-Cope, Michelle; Sidoli, Simone; Bhanu, Natarajan V; Won, Kyoung-Jae; Garcia, Benjamin A | BMC genomics. | 26847871 | 2016 Feb 04; |
| Challenges in Recruitment for the Study of Noninvasive Brain Stimulation in Stroke: Lessons from Deep Brain Stimulation. | Potter-Baker, Kelsey A; Bonnett, Corin E; Chabra, Patrick; Roelle, Sarah; Varnerin, Nicole; Cunningham, David A; Sankarasubramanian, Vishwanath; Pundik, Svetlana; Conforto, Adriana B; Machado, Andre G; Plow, Ela B | Journal of stroke and cerebrovascular diseases : the official journal of National Stroke Association. | 26851211 | 2016 Apr; |
| Degradation of Phage Transcripts by CRISPR-Associated RNases Enables Type III CRISPR-Cas Immunity. | Jiang, Wenyan; Samai, Poulami; Marraffini, Luciano A | Cell. | 26853474 | 2016 Feb 11; |
| An integrative approach for analyzing hundreds of neurons in task performing mice using wide-field calcium imaging. | Mohammed, Ali I; Gritton, Howard J; Tseng, Hua-an; Bucklin, Mark E; Yao, Zhaojie; Han, Xue | Scientific reports | 26854041 | 2016 Feb 08 |
| Modeling autism spectrum disorders with human neurons. | Beltrão-Braga, Patricia C B; Muotri, Alysson R | Brain research. | 26854137 | 2017 02 01; |
| The tooth exposome in children's health research. | Andra, Syam S; Austin, Christine; Arora, Manish | Current opinion in pediatrics. | 26859286 | 2016 Apr; |
| Association of the IGF1 gene with fasting insulin levels. | Willems, Sara M; Cornes, Belinda K; Brody, Jennifer A; Morrison, Alanna C; Lipovich, Leonard; Dauriz, Marco; Chen, Yuning; Liu, Ching-Ti; Rybin, Denis V; Gibbs, Richard A; Muzny, Donna; Pankow, James S; Psaty, Bruce M; Boerwinkle, Eric; Rotter, Jerome I; Siscovick, David S; Vasan, Ramachandran S; Kaplan, Robert C; Isaacs, Aaron; Dupuis, Josée; van Duijn, Cornelia M; Meigs, James B | European journal of human genetics : EJHG | 26860063 | 2016 Aug |
| Mucosal vaccine delivery: Current state and a pediatric perspective. | Shakya, Akhilesh Kumar; Chowdhury, Mohammed Y E; Tao, Wenqian; Gill, Harvinder Singh | Journal of controlled release : official journal of the Controlled Release Society. | 26860287 | 2016 Feb 6; |
| Quantitative analysis of insulin-like growth factor 2 receptor and insulin-like growth factor binding proteins to identify control mechanisms for insulin-like growth factor 1 receptor phosphorylation. | Tian, Dan; Mitchell, Isaiah; Kreeger, Pamela K | BMC systems biology. | 26861122 | 2016; |
| Deriving human ENS lineages for cell therapy and drug discovery in Hirschsprung disease. | Fattahi, Faranak; Steinbeck, Julius A; Kriks, Sonja; Tchieu, Jason; Zimmer, Bastian; Kishinevsky, Sarah; Zeltner, Nadja; Mica, Yvonne; El-Nachef, Wael; Zhao, Huiyong; de Stanchina, Elisa; Gershon, Michael D; Grikscheit, Tracy C; Chen, Shuibing; Studer, Lorenz | Nature. | 26863197 | 2016 Mar 3; |
| The Lymphatic System in Disease Processes and Cancer Progression. | Padera, Timothy P; Meijer, Eelco F J; Munn, Lance L | Annual review of biomedical engineering. | 26863922 | 2016 Jul 11; |
| Multiplexed barcoded CRISPR-Cas9 screening enabled by CombiGEM. | Wong, Alan S L; Choi, Gigi C G; Cui, Cheryl H; Pregernig, Gabriela; Milani, Pamela; Adam, Miriam; Perli, Samuel D; Kazer, Samuel W; Gaillard, Aleth; Hermann, Mario; Shalek, Alex K; Fraenkel, Ernest; Lu, Timothy K | Proceedings of the National Academy of Sciences of the United States of America. | 26864203 | 2016 Mar 01; |
| The March towards a Vaccine for Congenital CMV: Rationale and Models. | Bialas, Kristy M; Permar, Sallie R | PLoS pathogens. | 26866914 | 2016 Feb; |
| Tunable optical response of bowtie nanoantenna arrays on thermoplastic substrates. | Sharac, N; Sharma, H; Veysi, M; Sanderson, R N; Khine, M; Capolino, F; Ragan, R | Nanotechnology. | 26867001 | 2016 Mar 11; |
| Generation of an artificial intestine for the management of short bowel syndrome. | Ladd, Mitchell R; Niño, Diego F; March, John C; Sodhi, Chhinder P; Hackam, David J | Current opinion in organ transplantation. | 26867049 | 2016 Apr; |
| Environmental exposure to metals, neurodevelopment, and psychosis. | Modabbernia, Amirhossein; Arora, Manish; Reichenberg, Abraham | Current opinion in pediatrics. | 26867166 | 2016 Apr; |
| Chronic central serotonin depletion attenuates ventilation and body temperature in young but not adult Tph2 knockout rats. | Kaplan, Kara; Echert, Ashley E; Massat, Ben; Puissant, Madeleine M; Palygin, Oleg; Geurts, Aron M; Hodges, Matthew R | Journal of applied physiology (Bethesda, Md. : 1985). | 26869713 | 2016 May 01; |
| Dorsal Raphe Dopamine Neurons Represent the Experience of Social Isolation. | Matthews, Gillian A; Nieh, Edward H; Vander Weele, Caitlin M; Halbert, Sarah A; Pradhan, Roma V; Yosafat, Ariella S; Glober, Gordon F; Izadmehr, Ehsan M; Thomas, Rain E; Lacy, Gabrielle D; Wildes, Craig P; Ungless, Mark A; Tye, Kay M | Cell | 26871628 | 2016 Feb 11 |
| The Mechanistic Underpinnings of an ago1-Mediated, Environmentally Dependent, and Stochastic Phenotype. | Mason, G Alex; Lemus, Tzitziki; Queitsch, Christine | Plant physiology. | 26872948 | 2016 04; |
| Singing on the fly: sensorimotor integration and acoustic communication in Drosophila. | Coen, Philip; Murthy, Mala | Current opinion in neurobiology. | 26874218 | 2016 06; |
| MCT1 Modulates Cancer Cell Pyruvate Export and Growth of Tumors that Co-express MCT1 and MCT4. | Hong, Candice Sun; Graham, Nicholas A; Gu, Wen; Espindola Camacho, Carolina; Mah, Vei; Maresh, Erin L; Alavi, Mohammed; Bagryanova, Lora; Krotee, Pascal A L; Gardner, Brian K; Behbahan, Iman Saramipoor; Horvath, Steve; Chia, David; Mellinghoff, Ingo K; Hurvitz, Sara A; Dubinett, Steven M; Critchlow, Susan E; Kurdistani, Siavash K; Goodglick, Lee; Braas, Daniel; Graeber, Thomas G; Christofk, Heather R | Cell reports. | 26876179 | 2016 Feb 23; |
| Alterations in expression of imprinted genes from the H19/IGF2 loci in a multigenerational model of intrauterine growth restriction (IUGR). | Gonzalez-Rodriguez, Pablo; Cantu, Jessica; O'Neil, Derek; Seferovic, Maxim D; Goodspeed, Danielle M; Suter, Melissa A; Aagaard, Kjersti M | American journal of obstetrics and gynecology. | 26880735 | 2016 05; |
| Widespread RNA binding by chromatin-associated proteins. | G Hendrickson, David; Kelley, David R; Tenen, Danielle; Bernstein, Bradley; Rinn, John L | Genome biology. | 26883116 | 2016 Feb 16; |
| Functional Dissection of the CroRS Two-Component System Required for Resistance to Cell Wall Stressors in Enterococcus faecalis. | Kellogg, Stephanie L; Kristich, Christopher J | Journal of bacteriology. | 26883822 | 2016 Apr; |
| Cascade of neural processing orchestrates cognitive control in human frontal cortex. | Tang, Hanlin; Yu, Hsiang-Yu; Chou, Chien-Chen; Crone, Nathan E; Madsen, Joseph R; Anderson, William S; Kreiman, Gabriel | eLife. | 26888070 | 2016 Feb 18; |
| Correlations between prefrontal neurons form a small-world network that optimizes the generation of multineuron sequences of activity. | Luongo, Francisco J; Zimmerman, Chris A; Horn, Meryl E; Sohal, Vikaas S | Journal of neurophysiology. | 26888108 | 2016 05 01; |
| Ndufc2 Gene Inhibition Is Associated With Mitochondrial Dysfunction and Increased Stroke Susceptibility in an Animal Model of Complex Human Disease. | Rubattu, Speranza; Di Castro, Sara; Schulz, Herbert; Geurts, Aron M; Cotugno, Maria; Bianchi, Franca; Maatz, Henrike; Hummel, Oliver; Falak, Samreen; Stanzione, Rosita; Marchitti, Simona; Scarpino, Stefania; Giusti, Betti; Kura, Ada; Gensini, Gian Franco; Peyvandi, Flora; Mannucci, Pier Mannuccio; Rasura, Maurizia; Sciarretta, Sebastiano; Dwinell, Melinda R; Hubner, Norbert; Volpe, Massimo | Journal of the American Heart Association. | 26888427 | 2016 Feb; |
| Transformation of Probiotic Yeast and Their Recovery from Gastrointestinal Immune Tissues Following Oral Gavage in Mice. | Hudson, Lauren E; Stewart, Taryn P; Fasken, Milo B; Corbett, Anita H; Lamb, Tracey J | Journal of visualized experiments : JoVE. | 26890281 | 2016; |
| Quantitative Magnetic Separation of Particles and Cells Using Gradient Magnetic Ratcheting. | Murray, Coleman; Pao, Edward; Tseng, Peter; Aftab, Shayan; Kulkarni, Rajan; Rettig, Matthew; Di Carlo, Dino | Small (Weinheim an der Bergstrasse, Germany). | 26890496 | 2016 Apr 13; |
| Syndecan-4 Enhances Therapeutic Angiogenesis after Hind Limb Ischemia in Mice with Type 2 Diabetes. | Das, Subhamoy; Monteforte, Anthony J; Singh, Gunjan; Majid, Marjan; Sherman, Michael B; Dunn, Andrew K; Baker, Aaron B | Advanced healthcare materials. | 26891081 | 2016 May; |
| Neurodegeneration in a Drosophila model of adrenoleukodystrophy: the roles of the Bubblegum and Double bubble acyl-CoA synthetases. | Sivachenko, Anna; Gordon, Hannah B; Kimball, Suzanne S; Gavin, Erin J; Bonkowsky, Joshua L; Letsou, Anthea | Disease models & mechanisms. | 26893370 | 2016 Apr; |
| L1 Retrotransposition in Neural Progenitor Cells. | Muotri, Alysson R | Methods in molecular biology (Clifton, N.J.). | 26895053 | 2016; |
| Starting too soon: upstream reading frames repress downstream translation. | McGeachy, Anna M; Ingolia, Nicholas T | The EMBO journal. | 26896443 | 2016 Apr 01; |
| Making sense of the sensory regulation of hunger neurons. | Chen, Yiming; Knight, Zachary A | BioEssays : news and reviews in molecular, cellular and developmental biology. | 26898524 | 2016 Apr; |
| Orthotic Body-Weight Support Through Underactuated Potential Energy Shaping with Contact Constraints. | Lv, Ge; Gregg, Robert D | Proceedings of the ... IEEE Conference on Decision & Control / IEEE Control Systems Society. IEEE Conference on Decision & Control. | 26900254 | 2015 Dec; |
| Shortened Intervals during Heterologous Boosting Preserve Memory CD8 T Cell Function but Compromise Longevity. | Thompson, Emily A; Beura, Lalit K; Nelson, Christine E; Anderson, Kristin G; Vezys, Vaiva | Journal of immunology (Baltimore, Md. : 1950). | 26903479 | 2016 Apr 01; |
| Differences in codon bias and GC content contribute to the balanced expression of TLR7 and TLR9. | Newman, Zachary R; Young, Janet M; Ingolia, Nicholas T; Barton, Gregory M | Proceedings of the National Academy of Sciences of the United States of America. | 26903634 | 2016 Mar 8; |
| On-Demand Targeting: Investigating Biology with Proximity-Directed Chemistry. | Long, Marcus J C; Poganik, Jesse R; Aye, Yimon | Journal of the American Chemical Society | 26907082 | 2016 Mar 23 |
| Foundations and Emerging Paradigms for Computing in Living Cells. | Ma, Kevin C; Perli, Samuel D; Lu, Timothy K | Journal of molecular biology. | 26908220 | 2016 Feb 27; |
| Variations in Fusion Pore Formation in Cholesterol-Treated Platelets. | Finkenstaedt-Quinn, Solaire A; Gruba, Sarah M; Haynes, Christy L | Biophysical journal. | 26910428 | 2016 Feb 23; |
| A Bright and Fast Red Fluorescent Protein Voltage Indicator That Reports Neuronal Activity in Organotypic Brain Slices. | Abdelfattah, Ahmed S; Farhi, Samouil L; Zhao, Yongxin; Brinks, Daan; Zou, Peng; Ruangkittisakul, Araya; Platisa, Jelena; Pieribone, Vincent A; Ballanyi, Klaus; Cohen, Adam E; Campbell, Robert E | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 26911693 | 2016 Feb 24; |
| Large-scale imaging of cortical dynamics during sensory perception and behavior. | Wekselblatt, Joseph B; Flister, Erik D; Piscopo, Denise M; Niell, Cristopher M | Journal of neurophysiology. | 26912600 | 2016 06 01; |
| Unifying the Gait Cycle in the Control of a Powered Prosthetic Leg. | Quintero, David; Martin, Anne E; Gregg, Robert D | IEEE ... International Conference on Rehabilitation Robotics : [proceedings]. | 26913092 | 2015 Aug; |
| Calcium Ions Tune the Zinc-Sequestering Properties and Antimicrobial Activity of Human S100A12. | Cunden, Lisa S; Gaillard, Aleth; Nolan, Elizabeth M | Chemical science (Royal Society of Chemistry : 2010). | 26913170 | 2016 Feb 1; |
| Generation and characterization of rat liver stem cell lines and their engraftment in a rat model of liver failure. | Kuijk, Ewart W; Rasmussen, Shauna; Blokzijl, Francis; Huch, Meritxell; Gehart, Helmuth; Toonen, Pim; Begthel, Harry; Clevers, Hans; Geurts, Aron M; Cuppen, Edwin | Scientific reports. | 26915950 | 2016 Feb 26; |
| Blending block copolymer micelles in solution; Obstacles of blending. | Wright, Daniel B; Patterson, Joseph P; Gianneschi, Nathan C; Chassenieux, Christophe; Colombani, Olivier; O'Reilly, Rachel K | Polymer chemistry. | 26918033 | 2016 Feb 28; |
| Programming a Human Commensal Bacterium, Bacteroides thetaiotaomicron, to Sense and Respond to Stimuli in the Murine Gut Microbiota. | Mimee, Mark; Tucker, Alex C; Voigt, Christopher A; Lu, Timothy K | Cell systems. | 26918244 | 2015 Jul 29; |
| Activating Peptides for Cellular Uptake via Polymerization into High Density Brushes. | Blum, Angela P; Kammeyer, Jacquelin K; Gianneschi, Nathan C | Chemical science (Royal Society of Chemistry : 2010). | 26925209 | 2016 Feb 1; |
| Calcium-induced Tetramerization and Zinc Chelation Shield Human Calprotectin from Degradation by Host and Bacterial Extracellular Proteases. | Stephan, Jules R; Nolan, Elizabeth M | Chemical science (Royal Society of Chemistry : 2010). | 26925211 | 2016 Mar 1; |
| Interaction of graphene nanoribbons with components of the blood vascular system. | Chowdhury, Sayan Mullick; Fang, Justin; Sitharaman, Balaji | Future science OA. | 26925250 | 2015; |
| Synthetic RNA-protein modules integrated with native translation mechanisms to control gene expression in malaria parasites. | Ganesan, Suresh M; Falla, Alejandra; Goldfless, Stephen J; Nasamu, Armiyaw S; Niles, Jacquin C | Nature communications. | 26925876 | 2016; |
| Susceptibility Testing of Antibiotics That Degrade Faster than the Doubling Time of Slow-Growing Mycobacteria: Ertapenem Sterilizing Effect versus Mycobacterium tuberculosis. | Srivastava, Shashikant; van Rijn, Sander P; Wessels, A Mireille A; Alffenaar, Jan-Willem C; Gumbo, Tawanda | Antimicrobial agents and chemotherapy. | 26926650 | 2016 May; |
| Automated classification of optical coherence tomography images of human atrial tissue. | Gan, Yu; Tsay, David; Amir, Syed B; Marboe, Charles C; Hendon, Christine P | Journal of biomedical optics. | 26926869 | 2016 Oct; |
| A Membrane-Embedded Amino Acid Couples the SpoIIQ Channel Protein to Anti-Sigma Factor Transcriptional Repression during Bacillus subtilis Sporulation. | Flanagan, Kelly A; Comber, Joseph D; Mearls, Elizabeth; Fenton, Colleen; Erickson, Anna F Wang; Camp, Amy H | Journal of bacteriology. | 26929302 | 2016 May; |
| Functional and topological diversity of LOV domain photoreceptors. | Glantz, Spencer T; Carpenter, Eric J; Melkonian, Michael; Gardner, Kevin H; Boyden, Edward S; Wong, Gane Ka-Shu; Chow, Brian Y | Proceedings of the National Academy of Sciences of the United States of America | 26929367 | 2016 Mar 15 |
| Disruption of lipid homeostasis in the Gram-negative cell envelope activates a novel cell death pathway. | Sutterlin, Holly A; Shi, Handuo; May, Kerrie L; Miguel, Amanda; Khare, Somya; Huang, Kerwyn Casey; Silhavy, Thomas J | Proceedings of the National Academy of Sciences of the United States of America. | 26929379 | 2016 Mar 15; |
| Downregulation of 26S proteasome catalytic activity promotes epithelial-mesenchymal transition. | Banno, Asoka; Garcia, Daniel A; van Baarsel, Eric D; Metz, Patrick J; Fisch, Kathleen; Widjaja, Christella E; Kim, Stephanie H; Lopez, Justine; Chang, Aaron N; Geurink, Paul P; Florea, Bogdan I; Overkleeft, Hermen S; Ovaa, Huib; Bui, Jack D; Yang, Jing; Chang, John T | Oncotarget. | 26930717 | 2016 Apr 19; |
| Tumor Autonomous Effects of Vitamin D Deficiency Promote Breast Cancer Metastasis. | Williams, Jasmaine D; Aggarwal, Abhishek; Swami, Srilatha; Krishnan, Aruna V; Ji, Lijuan; Albertelli, Megan A; Feldman, Brian J | Endocrinology. | 26934299 | 2016 Apr; |
| Cardiac Light-Sheet Fluorescent Microscopy for Multi-Scale and Rapid Imaging of Architecture and Function. | Fei, Peng; Lee, Juhyun; Packard, René R Sevag; Sereti, Konstantina-Ioanna; Xu, Hao; Ma, Jianguo; Ding, Yichen; Kang, Hanul; Chen, Harrison; Sung, Kevin; Kulkarni, Rajan; Ardehali, Reza; Kuo, C-C Jay; Xu, Xiaolei; Ho, Chih-Ming; Hsiai, Tzung K | Scientific reports | 26935567 | 2016 Mar 03 |
| Light-Triggered Release of Bioactive Molecules from DNA Nanostructures. | Kohman, Richie E; Cha, Susie S; Man, Heng-Ye; Han, Xue | Nano letters | 26935839 | 2016 Apr 13 |
| Single-cell differences in matrix gene expression do not predict matrix deposition. | Cote, Allison J; McLeod, Claire M; Farrell, Megan J; McClanahan, Patrick D; Dunagin, Margaret C; Raj, Arjun; Mauck, Robert L | Nature communications. | 26936319 | 2016 Mar 03; |
| Probing Leader Cells in Endothelial Collective Migration by Plasma Lithography Geometric Confinement. | Yang, Yongliang; Jamilpour, Nima; Yao, Baoyin; Dean, Zachary S; Riahi, Reza; Wong, Pak Kin | Scientific reports. | 26936382 | 2016 Mar 03; |
| Highly stretchable wrinkled gold thin film wires. | Kim, Joshua; Park, Sun-Jun; Nguyen, Thao; Chu, Michael; Pegan, Jonathan D; Khine, Michelle | Applied physics letters. | 26937042 | 2016 Feb 08; |
| A Programmable DNA Origami Platform to Organize SNAREs for Membrane Fusion. | Xu, Weiming; Nathwani, Bhavik; Lin, Chenxiang; Wang, Jing; Karatekin, Erdem; Pincet, Frederic; Shih, William; Rothman, James E | Journal of the American Chemical Society. | 26938705 | 2016 Apr 6; |
| The Predictive Link between Matrix and Metastasis. | Barney, L E; Jansen, L E; Polio, S R; Galarza, S; Lynch, M E; Peyton, S R | Current opinion in chemical engineering. | 26942108 | 2016 Feb; |
| Network Architecture Predisposes an Enzyme to Either Pharmacologic or Genetic Targeting. | Jensen, Karin J; Moyer, Christian B; Janes, Kevin A | Cell systems. | 26942229 | 2016 Feb 24; |
| Layered hydrogels accelerate iPSC-derived neuronal maturation and reveal migration defects caused by MeCP2 dysfunction. | Zhang, Zhen-Ning; Freitas, Beatriz C; Qian, Hao; Lux, Jacques; Acab, Allan; Trujillo, Cleber A; Herai, Roberto H; Nguyen Huu, Viet Anh; Wen, Jessica H; Joshi-Barr, Shivanjali; Karpiak, Jerome V; Engler, Adam J; Fu, Xiang-Dong; Muotri, Alysson R; Almutairi | Proceedings of the National Academy of Sciences of the United States of America. | 26944080 | 2016 Mar 22; |
| Visualizing allele-specific expression in single cells reveals epigenetic mosaicism in an H19 loss-of-imprinting mutant. | Ginart, Paul; Kalish, Jennifer M; Jiang, Connie L; Yu, Alice C; Bartolomei, Marisa S; Raj, Arjun | Genes & development. | 26944681 | 2016 Mar 1; |
| Health Behaviors, Mental Health, and Health Care Utilization Among Single Mothers After Welfare Reforms in the 1990s. | Basu, Sanjay; Rehkopf, David H; Siddiqi, Arjumand; Glymour, M Maria; Kawachi, Ichiro | American journal of epidemiology. | 26946395 | 2016 Mar 15; |
| Basu et al. Respond to ''Interdisciplinary Approach for Policy Evaluation''. | Basu, Sanjay; Rehkopf, David H; Siddiqi, Arjumand; Glymour, M Maria; Kawachi, Ichiro | American journal of epidemiology. | 26946397 | 2016 Mar 15; |
| Original Research: Sickle cell anemia and pediatric strokes: Computational fluid dynamics analysis in the middle cerebral artery. | Rivera, Christian P; Veneziani, Alessandro; Ware, Russell E; Platt, Manu O | Experimental biology and medicine (Maywood, N.J.). | 26946534 | 2016 04; |
| Biophysical characterization of small molecule antiviral-loaded nanolipogels for HIV-1 chemoprophylaxis and topical mucosal application. | Ramanathan, R; Jiang, Y; Read, B; Golan-Paz, S; Woodrow, K A | Acta biomaterialia. | 26947382 | ; |
| Data publication with the structural biology data grid supports live analysis. | Meyer, Peter A; Socias, Stephanie; Key, Jason; Ransey, Elizabeth; Tjon, Emily C; Buschiazzo, Alejandro; Lei, Ming; Botka, Chris; Withrow, James; Neau, David; Rajashankar, Kanagalaghatta; Anderson, Karen S; Baxter, Richard H; Blacklow, Stephen C; Boggon, Titus J; Bonvin, Alexandre M J J; Borek, Dominika; Brett, Tom J; Caflisch, Amedeo; Chang, Chung-I; Chazin, Walter J; Corbett, Kevin D; Cosgrove, Michael S; Crosson, Sean; Dhe-Paganon, Sirano; Di Cera, Enrico; Drennan, Catherine L; Eck, Michael J; Eichman, Brandt F; Fan, Qing R; Ferré-D'Amaré, Adrian R; Fromme, J Christopher; Garcia, K Christopher; Gaudet, Rachelle; Gong, Peng; Harrison, Stephen C; Heldwein, Ekaterina E; Jia, Zongchao; Keenan, Robert J; Kruse, Andrew C; Kvansakul, Marc; McLellan, Jason S; Modis, Yorgo; Nam, Yunsun; Otwinowski, Zbyszek; Pai, Emil F; Pereira, Pedro José Barbosa; Petosa, Carlo; Raman, C S; Rapoport, Tom A; Roll-Mecak, Antonina; Rosen, Michael K; Rudenko, Gabby; Schlessinger, Joseph; Schwartz, Thomas U; Shamoo, Yousif; Sondermann, Holger; Tao, Yizhi J; Tolia, Niraj H; Tsodikov, Oleg V; Westover, Kenneth D; Wu, Hao; Foster, Ian; Fraser, James S; Maia, Filipe R N C; Gonen, Tamir; Kirchhausen, Tom; Diederichs, Kay; Crosas, Mercè; Sliz, Piotr | Nature communications. | 26947396 | 2016 Mar 07; |
| The Complete Genome Sequences, Unique Mutational Spectra, and Developmental Potency of Adult Neurons Revealed by Cloning. | Hazen, Jennifer L; Faust, Gregory G; Rodriguez, Alberto R; Ferguson, William C; Shumilina, Svetlana; Clark, Royden A; Boland, Michael J; Martin, Greg; Chubukov, Pavel; Tsunemoto, Rachel K; Torkamani, Ali; Kupriyanov, Sergey; Hall, Ira M; Baldwin, Kristin | Neuron. | 26948891 | 2016 Mar 16; |
| Single-cell transcriptome sequencing: recent advances and remaining challenges. | Liu, Serena; Trapnell, Cole | F1000Research | 26949524 | 2016 |
| Identification of Human Neuronal Protein Complexes Reveals Biochemical Activities and Convergent Mechanisms of Action in Autism Spectrum Disorders. | Li, Jingjing; Ma, Zhihai; Shi, Minyi; Malty, Ramy H; Aoki, Hiroyuki; Minic, Zoran; Phanse, Sadhna; Jin, Ke; Wall, Dennis P; Zhang, Zhaolei; Urban, Alexander E; Hallmayer, Joachim; Babu, Mohan; Snyder, Michael | Cell systems | 26949739 | 2015 Nov 25 |
| Role of the Cys154Arg Substitution in Ribosomal Protein L3 in Oxazolidinone Resistance in Mycobacterium tuberculosis. | Makafe, Gaëlle Guiewi; Cao, Yuanyuan; Tan, Yaoju; Julius, Mugweru; Liu, Zhiyong; Wang, Changwei; Njire, Moses M; Cai, Xingshan; Liu, Tianzhou; Wang, Bangxing; Pang, Wei; Tan, Shouyong; Zhang, Buchang; Yew, Wing Wai; Lamichhane, Gyanu; Guo, Jintao; Zhang, Tianyu | Antimicrobial agents and chemotherapy. | 26953211 | 2016 May; |
| Site-specific Proteolysis Mobilizes TorsinA from the Membrane of the Endoplasmic Reticulum (ER) in Response to ER Stress and B Cell Stimulation. | Zhao, Chenguang; Brown, Rebecca S H; Tang, Chih-Hang Anthony; Hu, Chih-Chi Andrew; Schlieker, Christian | The Journal of biological chemistry. | 26953341 | 2016 Apr 29; |
| Arrhythmogenic Right Ventricular Cardiomyopathy: Electroarchitecture of the Substrate. | Watanabe, Atsuyuki; Seki, Atsuko; Fishbein, Michael C; Shivkumar, Kalyanam; Vaseghi, Marmar | HeartRhythm case reports. | 26955520 | 2016 Jan 1; |
| Stromal Cells in Dense Collagen Promote Cardiomyocyte and Microvascular Patterning in Engineered Human Heart Tissue. | Roberts, Meredith A; Tran, Dominic; Coulombe, Kareen L K; Razumova, Maria; Regnier, Michael; Murry, Charles E; Zheng, Ying | Tissue engineering. Part A. | 26955856 | 2016 Apr; |
| Human symbionts inject and neutralize antibacterial toxins to persist in the gut. | Wexler, Aaron G; Bao, Yiqiao; Whitney, John C; Bobay, Louis-Marie; Xavier, Joao B; Schofield, Whitman B; Barry, Natasha A; Russell, Alistair B; Tran, Bao Q; Goo, Young Ah; Goodlett, David R; Ochman, Howard; Mougous, Joseph D; Goodman, Andrew L | Proceedings of the National Academy of Sciences of the United States of America. | 26957597 | 2016 Mar 29; |
| Topologically associated domains enriched for lineage-specific genes reveal expression-dependent nuclear topologies during myogenesis. | Neems, Daniel S; Garza-Gongora, Arturo G; Smith, Erica D; Kosak, Steven T | Proceedings of the National Academy of Sciences of the United States of America | 26957603 | 2016 Mar 22 |
| DenguePredict: An Integrated Drug Repositioning Approach towards Drug Discovery for Dengue. | Wang, QuanQiu; Xu, Rong | AMIA ... Annual Symposium proceedings. AMIA Symposium. | 26958268 | 2015; |
| tcTKB: an integrated cardiovascular toxicity knowledge base for targeted cancer drugs. | Xu, Rong; Wang, QuanQiu | AMIA ... Annual Symposium proceedings. AMIA Symposium. | 26958275 | 2015; |
| Combining Human Disease Genetics and Mouse Model Phenotypes towards Drug Repositioning for Parkinson's disease. | Chen, Yang; Cai, Xiaoshu; Xu, Rong | AMIA ... Annual Symposium proceedings. AMIA Symposium. | 26958284 | 2015; |
| Optogenetics: Turning the Microscope on Its Head. | Cohen, Adam E | Biophysical journal. | 26958872 | 2016 Mar 08; |
| Hunting Viral Receptors Using Haploid Cells. | Pillay, Sirika; Carette, Jan E | Annual review of virology. | 26958914 | 2015 Nov; |
| Ribosome Profiling as a Tool to Decipher Viral Complexity. | Stern-Ginossar, Noam; Ingolia, Nicholas T | Annual review of virology. | 26958919 | 2015 Nov; |
| Recent Advances in Understanding and Engineering Polyketide Synthesis. | Zhang, Wenjun; Liu, Joyce | F1000Research | 26962443 | 2016 |
| The placental membrane microbiome is altered among subjects with spontaneous preterm birth with and without chorioamnionitis. | Prince, Amanda L; Ma, Jun; Kannan, Paranthaman S; Alvarez, Manuel; Gisslen, Tate; Harris, R Alan; Sweeney, Emma L; Knox, Christine L; Lambers, Donna S; Jobe, Alan H; Chougnet, Claire A; Kallapur, Suhas G; Aagaard, Kjersti M | American journal of obstetrics and gynecology. | 26965447 | 2016 05; |
| Dissecting Electrostatic Contributions to Folding and Self-Assembly Using Designed Multicomponent Peptide Systems. | Parmar, Avanish S; James, Jose K; Grisham, Daniel R; Pike, Douglas H; Nanda, Vikas | Journal of the American Chemical Society. | 26966815 | 2016 Apr 06; |
| Cardiac sympathetic denervation for intractable ventricular arrhythmias in Chagas disease. | Saenz, Luis Carlos; Corrales, Federico Malavassi; Bautista, William; Traina, Mahmoud; Meymandi, Sheba; Rodriguez, Diego A; Tellez, Luis J; Vaseghi, Marmar; Garcia, Fermin; Shivkumar, Kalyanam; Bradfield, Jason S | Heart rhythm. | 26969783 | 2016 07; |
| What is a ''DNA-Compatible'' Reaction? | Malone, Marie L; Paegel, Brian M | ACS combinatorial science. | 26971959 | 2016 Apr 11; |
| Human NK Cell Diversity in Viral Infection: Ramifications of Ramification. | Strauss-Albee, Dara M; Blish, Catherine A | Frontiers in immunology. | 26973646 | 2016; |
| Metabolic stressors disrupt proteome homeostasis to suppress malignancy. | Dai, Chengkai | Molecular & cellular oncology. | 26973866 | 2015; |
| Engineering Modular Viral Scaffolds for Targeted Bacterial Population Editing. | Ando, Hiroki; Lemire, Sebastien; Pires, Diana P; Lu, Timothy K | Cell systems. | 26973885 | 2015 Sep 23; |
| Artificial eye for scotopic vision with bioinspired all-optical photosensitivity enhancer. | Liu, Hewei; Huang, Yinggang; Jiang, Hongrui | Proceedings of the National Academy of Sciences of the United States of America. | 26976565 | 2016 Apr 12; |
| Optimizing matching and analysis combinations for estimating causal effects. | Colson, K Ellicott; Rudolph, Kara E; Zimmerman, Scott C; Goin, Dana E; Stuart, Elizabeth A; Laan, Mark van der; Ahern, Jennifer | Scientific reports. | 26980444 | 2016; |
| SuhB Associates with Nus Factors To Facilitate 30S Ribosome Biogenesis in Escherichia coli. | Singh, Navjot; Bubunenko, Mikhail; Smith, Carol; Abbott, David M; Stringer, Anne M; Shi, Ronald; Court, Donald L; Wade, Joseph T | mBio. | 26980831 | 2016; |
| Insights into kidney stem cell development and regeneration using zebrafish. | Drummond, Bridgette E; Wingert, Rebecca A | World journal of stem cells. | 26981168 | 2016 Feb 26; |
| Understanding the Role of ECM Protein Composition and Geometric Micropatterning for Engineering Human Skeletal Muscle. | Duffy, Rebecca M; Sun, Yan; Feinberg, Adam W | Annals of biomedical engineering. | 26983843 | 2016 Jun; |
| Cardinal Orientation Selectivity Is Represented by Two Distinct Ganglion Cell Types in Mouse Retina. | Nath, Amurta; Schwartz, Gregory W | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 26985031 | 2016 Mar 16; |
| A multimodal imaging workflow to visualize metal mixtures in the human placenta and explore colocalization with biological response markers. | Niedzwiecki, Megan M; Austin, Christine; Remark, Romain; Merad, Miriam; Gnjatic, Sacha; Estrada-Gutierrez, Guadalupe; Espejel-Nuñez, Aurora; Borboa-Olivares, Hector; Guzman-Huerta, Mario; Wright, Rosalind J; Wright, Robert O; Arora, Manish | Metallomics : integrated biometal science. | 26987553 | 2016 Apr 1; |
| Versatile protein tagging in cells with split fluorescent protein. | Kamiyama, Daichi; Sekine, Sayaka; Barsi-Rhyne, Benjamin; Hu, Jeffrey; Chen, Baohui; Gilbert, Luke A; Ishikawa, Hiroaki; Leonetti, Manuel D; Marshall, Wallace F; Weissman, Jonathan S; Huang, Bo | Nature communications. | 26988139 | 2016; |
| Regulation at a distance of biomolecular interactions using a DNA origami nanoactuator. | Ke, Yonggang; Meyer, Travis; Shih, William M; Bellot, Gaetan | Nature communications. | 26988942 | 2016; |
| Stable Encapsulation of Air in Mesoporous Silica Nanoparticles: Fluorocarbon-Free Nanoscale Ultrasound Contrast Agents. | Yildirim, Adem; Chattaraj, Rajarshi; Blum, Nicholas T; Goldscheitter, Galen M; Goodwin, Andrew P | Advanced healthcare materials. | 26990167 | 2016 Jun; |
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| Placental function assessed visually using half-Fourier acquisition single-shot turbo spin-echo (HASTE) magnetic resonance imaging. | Himoto, Yuki; Kido, Aki; Mogami, Haruta; Moribata, Yusaku; Minamiguchi, Sachiko; Shitano, Fuki; Kiguchi, Kayo; Kurata, Yasuhisa; Konishi, Ikuo; Togashi, Kaori | Placenta. | 26992675 | 2016 Mar; |
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| Dynamic peptides of human TPP1 fulfill diverse functions in telomere maintenance. | Rajavel, Malligarjunan; Orban, Tivadar; Xu, Mengyuan; Hernandez-Sanchez, Wilnelly; de la Fuente, Maria; Palczewski, Krzysztof; Taylor, Derek J | Nucleic acids research. | 27655633 | ; |
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| 53BP1 ablation rescues genomic instability in mice expressing 'RING-less' BRCA1. | Li, Minxing; Cole, Francesca; Patel, Dharm S; Misenko, Sarah M; Her, Joonyoung; Malhowski, Amy; Alhamza, Ali; Zheng, Haiyan; Baer, Richard; Ludwig, Thomas; Jasin, Maria; Nussenzweig, André; Serrano, Lourdes; Bunting, Samuel F | EMBO reports. | 27670884 | 2016 Nov; |
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| Effect of platelet-rich plasma on degeneration change of rotator cuff muscles: In vitro and in vivo evaluations. | Takase, Fumiaki; Inui, Atsuyuki; Mifune, Yutaka; Sakata, Ryosuke; Muto, Tomoyuki; Harada, Yoshifumi; Ueda, Yasuhiro; Kokubu, Takeshi; Kurosaka, Masahiro | Journal of orthopaedic research : official publication of the Orthopaedic Research Society. | 27684960 | 2017 08; |
| Micropatterning and Assembly of 3D Microvessels. | Roberts, Meredith A; Kotha, Surya S; Phong, Kiet T; Zheng, Ying | Journal of visualized experiments : JoVE. | 27685466 | 2016 Sep 09; |
| PLGA nanoparticle encapsulation reduces toxicity while retaining the therapeutic efficacy of EtNBS-PDT in vitro. | Hung, Hsin-I; Klein, Oliver J; Peterson, Sam W; Rokosh, Sarah R; Osseiran, Sam; Nowell, Nicholas H; Evans, Conor L | Scientific reports. | 27686626 | 2016 Sep 30; |
| Bithionol blocks pathogenicity of bacterial toxins, ricin, and Zika virus. | Leonardi, William; Zilbermintz, Leeor; Cheng, Luisa W; Zozaya, Josue; Tran, Sharon H; Elliott, Jeffrey H; Polukhina, Kseniya; Manasherob, Robert; Li, Amy; Chi, Xiaoli; Gharaibeh, Dima; Kenny, Tara; Zamani, Rouzbeh; Soloveva, Veronica; Haddow, Andrew D; Nasar, Farooq; Bavari, Sina; Bassik, Michael C; Cohen, Stanley N; Levitin, Anastasia; Martchenko, Mikhail | Scientific reports. | 27686742 | 2016 Sep 30; |
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| Zika Virus Infection Induces Cranial Neural Crest Cells to Produce Cytokines at Levels Detrimental for Neurogenesis. | Bayless, Nicholas L; Greenberg, Rachel S; Swigut, Tomek; Wysocka, Joanna; Blish, Catherine A | Cell host & microbe. | 27693308 | 2016 Oct 12; |
| Intrinsically Disordered Proteins Drive Emergence and Inheritance of Biological Traits. | Chakrabortee, Sohini; Byers, James S; Jones, Sandra; Garcia, David M; Bhullar, Bhupinder; Chang, Amelia; She, Richard; Lee, Laura; Fremin, Brayon; Lindquist, Susan; Jarosz, Daniel F | Cell. | 27693355 | 2016 Oct 6; |
| Monte Carlo and analytic simulations in nanoparticle-enhanced radiation therapy. | Paro, Autumn D; Hossain, Mainul; Webster, Thomas J; Su, Ming | International journal of nanomedicine. | 27695329 | 2016; |
| Episodic memory of odors stratifies Alzheimer biomarkers in normal elderly. | Dhilla Albers, Alefiya; Asafu-Adjei, Josephine; Delaney, Mary K; Kelly, Kathleen E; Gomez-Isla, Teresa; Blacker, Deborah; Johnson, Keith A; Sperling, Reisa A; Hyman, Bradley T; Betensky, Rebecca A; Hastings, Lloyd; Albers, Mark W | Annals of neurology. | 27696605 | 2016 Dec; |
| Drug repurposing for glioblastoma based on molecular subtypes. | Chen, Yang; Xu, Rong | Journal of biomedical informatics. | 27697594 | 2016 12; |
| Rotator cuff tear state modulates self-renewal and differentiation capacity of human skeletal muscle progenitor cells. | Thomas, Kelsey A; Gibbons, Michael C; Lane, John G; Singh, Anshuman; Ward, Samuel R; Engler, Adam J | Journal of orthopaedic research : official publication of the Orthopaedic Research Society. | 27699827 | 2017 08; |
| Effects of cell type and configuration on anabolic and catabolic activity in 3D co-culture of mesenchymal stem cells and nucleus pulposus cells. | Ouyang, Ann; Cerchiari, Alec E; Tang, Xinyan; Liebenberg, Ellen; Alliston, Tamara; Gartner, Zev J; Lotz, Jeffrey C | Journal of orthopaedic research : official publication of the Orthopaedic Research Society. | 27699833 | 2017 Jan; |
| Development of an advanced microfluidic micropipette aspiration device for single cell mechanics studies. | Lee, Lap Man; Lee, Jin Woo; Chase, Danielle; Gebrezgiabhier, Daniel; Liu, Allen P | Biomicrofluidics. | 27703591 | 2016 Sep; |
| Weight loss after head and neck cancer: A dynamic relationship with depressive symptoms. | Van Liew, Julia R; Brock, Rebecca L; Christensen, Alan J; Karnell, Lucy Hynds; Pagedar, Nitin A; Funk, Gerry F | Head & neck. | 27704695 | 2017 Feb; |
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| High content image analysis of focal adhesion-dependent mechanosensitive stem cell differentiation. | Holle, Andrew W; McIntyre, Alistair J; Kehe, Jared; Wijesekara, Piyumi; Young, Jennifer L; Vincent, Ludovic G; Engler, Adam J | Integrative biology : quantitative biosciences from nano to macro. | 27723854 | 2016 10 10; |
| Tunable and label-free virus enrichment for ultrasensitive virus detection using carbon nanotube arrays. | Yeh, Yin-Ting; Tang, Yi; Sebastian, Aswathy; Dasgupta, Archi; Perea-Lopez, Nestor; Albert, Istvan; Lu, Huaguang; Terrones, Mauricio; Zheng, Si-Yang | Science advances. | 27730213 | 2016 Oct; |
| A High-Content Larval Zebrafish Brain Imaging Method for Small Molecule Drug Discovery. | Liu, Harrison; Chen, Steven; Huang, Kevin; Kim, Jeffrey; Mo, Han; Iovine, Raffael; Gendre, Julie; Pascal, Pauline; Li, Qiang; Sun, Yaping; Dong, Zhiqiang; Arkin, Michelle; Guo, Su; Huang, Bo | PloS one | 27732643 | 2016 |
| Reversal of Cytosolic One-Carbon Flux Compensates for Loss of the Mitochondrial Folate Pathway. | Ducker, Gregory S; Chen, Li; Morscher, Raphael J; Ghergurovich, Jonathan M; Esposito, Mark; Teng, Xin; Kang, Yibin; Rabinowitz, Joshua D | Cell metabolism. | 27732838 | 2016 10 11; |
| A Minimum Epitope Overlap between Infections Strongly Narrows the Emerging T Cell Repertoire. | Oberle, Susanne G; Hanna-El-Daher, Layane; Chennupati, Vijaykumar; Enouz, Sarah; Scherer, Stefanie; Prlic, Martin; Zehn, Dietmar | Cell reports. | 27732840 | 2016 Oct 11; |
| The p53 Pathway Controls SOX2-Mediated Reprogramming in the Adult Mouse Spinal Cord. | Wang, Lei-Lei; Su, Zhida; Tai, Wenjiao; Zou, Yuhua; Xu, Xiao-Ming; Zhang, Chun-Li | Cell reports. | 27732862 | 2016 10 11; |
| Receptor for Activated C-Kinase 1 (PfRACK1) is required for Plasmodium falciparum intra-erythrocytic proliferation. | Blomqvist, Karin; DiPetrillo, Christen; Streva, Vincent A; Pine, Stewart; Dvorin, Jeffrey D | Molecular and biochemical parasitology. | 27732881 | 2016 Oct 11; |
| Dual action of neurokinin-1 antagonists on Mas-related GPCRs. | Azimi, Ehsan; Reddy, Vemuri B; Shade, Kai-Ting C; Anthony, Robert M; Talbot, Sebastien; Pereira, Paula Juliana Seadi; Lerner, Ethan A | JCI insight. | 27734033 | 2016 Oct 06; |
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| Optical manipulation of a single human virus for study of viral-cell interactions. | Hou, Ximiao; DeSantis, Michael C; Tian, Chunjuan; Cheng, Wei | Proceedings of SPIE--the International Society for Optical Engineering. | 27746582 | 2016 Aug; |
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| The rise of the FGFR inhibitor in advanced biliary cancer: the next cover of time magazine? | Rizvi, Sumera; Borad, Mitesh J | Journal of gastrointestinal oncology. | 27747092 | 2016 Oct; |
| 3D Printing PDMS Elastomer in a Hydrophilic Support Bath via Freeform Reversible Embedding. | Hinton, Thomas J; Hudson, Andrew; Pusch, Kira; Lee, Andrew; Feinberg, Adam W | ACS biomaterials science & engineering. | 27747289 | 2016 Oct 10; |
| Molecular mechanism for isoform-selective inhibition of acyl protein thioesterases 1 and 2 (APT1 and APT2). | Won, Sang Joon; Davda, Dahvid; Labby, Kristin J; Hwang, Sin Ye; Pricer, Rachel E; Majmudar, Jaimeen D; Armacost, Kira A; Rodriguez, Laura A; Rodriguez, Christina L; Chong, Fei San; Torossian, Kristopher A; Palakurthi, Jasmine; Hur, Edward S; Meagher, Jennifer L; Brooks, Charles L; Stuckey, Jeanne A; Martin, Brent R | ACS chemical biology. | 27748579 | 2016 Oct 17; |
| Immune Response Modulation of Conjugated Agonists with Changing Linker Length. | Ryu, Keun Ah; Slowinska, Katarzyna; Moore, Troy; Esser-Kahn, Aaron | ACS chemical biology. | 27749034 | 2016 Dec 16; |
| Salmonella Typhimurium Enzymatically Landscapes the Host Intestinal Epithelial Cell (IEC) Surface Glycome to Increase Invasion. | Park, Dayoung; Arabyan, Narine; Williams, Cynthia C; Song, Ting; Mitra, Anupam; Weimer, Bart C; Maverakis, Emanual; Lebrilla, Carlito B | Molecular & cellular proteomics : MCP. | 27754876 | 2016 Dec; |
| E2A-PBX1 Remodels Oncogenic Signaling Networks in B-cell Precursor Acute Lymphoid Leukemia. | Duque-Afonso, Jesús; Lin, Chiou-Hong; Han, Kyuho; Wei, Michael C; Feng, Jue; Kurzer, Jason H; Schneidawind, Corina; Wong, Stephen Hon-Kit; Bassik, Michael C; Cleary, Michael L | Cancer research. | 27758892 | 2016 Dec 01; |
| Disease Burden and Symptom Structure of Autism in Neurofibromatosis Type 1: A Study of the International NF1-ASD Consortium Team (INFACT). | Morris, Stephanie M; Acosta, Maria T; Garg, Shruti; Green, Jonathan; Huson, Susan; Legius, Eric; North, Kathryn N; Payne, Jonathan M; Plasschaert, Ellen; Frazier, Thomas W; Weiss, Lauren A; Zhang, Yi; Gutmann, David H; Constantino, John N | JAMA psychiatry. | 27760236 | 2016 Dec 01; |
| Macrophage Epithelial Reprogramming Underlies Mycobacterial Granuloma Formation and Promotes Infection. | Cronan, Mark R; Beerman, Rebecca W; Rosenberg, Allison F; Saelens, Joseph W; Johnson, Matthew G; Oehlers, Stefan H; Sisk, Dana M; Jurcic Smith, Kristen L; Medvitz, Neil A; Miller, Sara E; Trinh, Le A; Fraser, Scott E; Madden, John F; Turner, Joanne; Stout, Jason E; Lee, Sunhee; Tobin, David M | Immunity. | 27760340 | 2016 10 18; |
| Antiviral CD8(+) T Cells Restricted by Human Leukocyte Antigen Class II Exist during Natural HIV Infection and Exhibit Clonal Expansion. | Ranasinghe, Srinika; Lamothe, Pedro A; Soghoian, Damien Z; Kazer, Samuel W; Cole, Michael B; Shalek, Alex K; Yosef, Nir; Jones, R Brad; Donaghey, Faith; Nwonu, Chioma; Jani, Priya; Clayton, Gina M; Crawford, Frances; White, Janice; Montoya, Alana; Power, | Immunity. | 27760342 | 2016 Oct 18; |
| Capturing Invisible Motions in the Transition from Ground to Rare Excited States of T4 Lysozyme L99A. | Schiffer, Jamie M; Feher, Victoria A; Malmstrom, Robert D; Sida, Roxana; Amaro, Rommie E | Biophysical journal. | 27760351 | 2016 Oct 18; |
| The Largest Response Component in the Motor Cortex Reflects Movement Timing but Not Movement Type. | Kaufman, Matthew T; Seely, Jeffrey S; Sussillo, David; Ryu, Stephen I; Shenoy, Krishna V; Churchland, Mark M | eNeuro. | 27761519 | 2016 Jul-Aug; |
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| 5-Alkyloxytryptamines are membrane-targeting, broad-spectrum antibiotics. | Faulkner, Katherine C; Hurley, Katherine A; Weibel, Douglas B | Bioorganic & medicinal chemistry letters. | 27765507 | 2016 11 15; |
| Genomic and functional techniques to mine the microbiome for novel antimicrobials and antimicrobial resistance genes. | Adu-Oppong, Boahemaa; Gasparrini, Andrew J; Dantas, Gautam | Annals of the New York Academy of Sciences. | 27768825 | 2017 Jan; |
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| Single-molecule imaging reveals modulation of cell wall synthesis dynamics in live bacterial cells. | Lee, Timothy K; Meng, Kevin; Shi, Handuo; Huang, Kerwyn Casey | Nature communications. | 27774981 | 2016 10 24; |
| Carbapenems against Mycobacterium tuberculosis: a review of the evidence. | Jaganath, D; Lamichhane, G; Shah, M | The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease. | 27776583 | 2016 11; |
| Exercise Recommendations for the Management of Symptoms Clusters Resulting From Cancer and Cancer Treatments. | Mustian, Karen M; Cole, Calvin L; Lin, Po Ju; Asare, Matt; Fung, Chunkit; Janelsins, Michelle C; Kamen, Charles S; Peppone, Luke J; Magnuson, Allison | Seminars in oncology nursing. | 27776835 | 2016 11; |
| Single Molecule Force Measurements in Living Cells Reveal a Minimally Tensioned Integrin State. | Chang, Alice C; Mekhdjian, Armen H; Morimatsu, Masatoshi; Denisin, Aleksandra Kirillovna; Pruitt, Beth L; Dunn, Alexander R | ACS nano. | 27779848 | 2016 Dec 27; |
| Super-resolution imaging of fluorescently labeled, endogenous RNA Polymerase II in living cells with CRISPR/Cas9-mediated gene editing. | Cho, Won-Ki; Jayanth, Namrata; Mullen, Susan; Tan, Tzer Han; Jung, Yoon J; Cissé, Ibrahim I | Scientific reports. | 27782203 | 2016 Oct 26; |
| Biophysical characterization of organelle-based RNA/protein liquid phases using microfluidics. | Taylor, Nicole; Elbaum-Garfinkle, Shana; Vaidya, Nilesh; Zhang, Huaiying; Stone, Howard A; Brangwynne, Clifford P | Soft matter. | 27791212 | ; |
| Role of heterogeneous cell population on modulation of dendritic cell phenotype and activation of CD8 T cells for use in cell-based immunotherapies. | Frizzell, Hannah; Park, Jaehyung; Comandante Lou, Natacha; Woodrow, Kim A | Cellular immunology. | 27793335 | 2017 Jan; |
| Nociceptor Sensory Neuron-Immune Interactions in Pain and Inflammation. | Pinho-Ribeiro, Felipe A; Verri Jr, Waldiceu A; Chiu, Isaac M | Trends in immunology. | 27793571 | ; |
| Extracellular matrix downregulation in the Drosophila heart preserves contractile function and improves lifespan. | Sessions, Ayla O; Kaushik, Gaurav; Parker, Sarah; Raedschelders, Koen; Bodmer, Rolf; Van Eyk, Jennifer E; Engler, Adam J | Matrix biology : journal of the International Society for Matrix Biology. | 27793636 | ; |
| Synthetic Biogenesis of Bacterial Amyloid Nanomaterials with Tunable Inorganic-Organic Interfaces and Electrical Conductivity. | Seker, Urartu Ozgur Safak; Chen, Allen Y; Citorik, Robert J; Lu, Timothy K | ACS synthetic biology. | 27794590 | 2017 02 17; |
| Loss-of-function genetic tools for animal models: cross-species and cross-platform differences. | Housden, Benjamin E; Muhar, Matthias; Gemberling, Matthew; Gersbach, Charles A; Stainier, Didier Y R; Seydoux, Geraldine; Mohr, Stephanie E; Zuber, Johannes; Perrimon, Norbert | Nature reviews. Genetics. | 27795562 | 2017 01; |
| Targeting Reactive Carbonyls for Identifying Natural Products and Their Biosynthetic Origins. | Maxson, Tucker; Tietz, Jonathan I; Hudson, Graham A; Guo, Xiao Rui; Tai, Hua-Chia; Mitchell, Douglas A | Journal of the American Chemical Society. | 27797509 | 2016 Nov 23; |
| Dissecting Torsin/cofactor function at the nuclear envelope: a genetic study. | Laudermilch, Ethan; Tsai, Pei-Ling; Graham, Morven; Turner, Elizabeth; Zhao, Chenguang; Schlieker, Christian | Molecular biology of the cell. | 27798237 | 2016 Dec 15; |
| Cotranscriptional folding of a riboswitch at nucleotide resolution. | Watters, Kyle E; Strobel, Eric J; Yu, Angela M; Lis, John T; Lucks, Julius B | Nature structural & molecular biology. | 27798597 | ; |
| Directed evolution using dCas9-targeted somatic hypermutation in mammalian cells. | Hess, Gaelen T; Frésard, Laure; Han, Kyuho; Lee, Cameron H; Li, Amy; Cimprich, Karlene A; Montgomery, Stephen B; Bassik, Michael C | Nature methods. | 27798611 | 2016 Dec; |
| Genomic diversity in autopsy samples reveals within-host dissemination of HIV-associated Mycobacterium tuberculosis. | Lieberman, Tami D; Wilson, Douglas; Misra, Reshma; Xiong, Lealia L; Moodley, Prashini; Cohen, Ted; Kishony, Roy | Nature medicine. | 27798613 | 2016 12; |
| Loss of SynDIG1 Reduces Excitatory Synapse Maturation But Not Formation In Vivo. | Chenaux, George; Matt, Lucas; Hill, Travis C; Kaur, Inderpreet; Liu, Xiao-Bo; Kirk, Lyndsey M; Speca, David J; McMahon, Samuel A; Zito, Karen; Hell, Johannes W; Díaz, Elva | eNeuro. | 27800545 | 2016 Sep-Oct; |
| Synthetic Mucus Nanobarriers for Identification of Glycan-Dependent Primary Influenza A Infection Inhibitors. | Cohen, Miriam; Senaati, Hooman P; Fisher, Christopher J; Huang, Mia L; Gagneux, Pascal; Godula, Kamil | ACS central science. | 27800553 | 2016 Oct 26; |
| EGFL6 Regulates the Asymmetric Division, Maintenance, and Metastasis of ALDH+ Ovarian Cancer Cells. | Bai, Shoumei; Ingram, Patrick; Chen, Yu-Chih; Deng, Ning; Pearson, Alex; Niknafs, Yashar; O'Hayer, Patrick; Wang, Yun; Zhang, Zhong-Yin; Boscolo, Elisa; Bischoff, Joyce; Yoon, Euisik; Buckanovich, Ronald J | Cancer research. | 27803106 | 2016 Nov 01; |
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| T-REX on-demand redox targeting in live cells. | Parvez, Saba; Long, Marcus J C; Lin, Hong-Yu; Zhao, Yi; Haegele, Joseph A; Pham, Vanha N; Lee, Dustin K; Aye, Yimon | Nature protocols. | 27809314 | 2016 Dec; |
| A glucocorticoid- and diet-responsive pathway toggles adipocyte precursor cell activity in vivo. | Wong, Janica C; Krueger, Katherine C; Costa, Maria José; Aggarwal, Abhishek; Du, Hongqing; McLaughlin, Tracey L; Feldman, Brian J | Science signaling. | 27811141 | 2016 Oct 25; |
| Genomic Variants Associated with Resistance to High Fat Diet Induced Obesity in a Primate Model. | Harris, R Alan; Alcott, Callison E; Sullivan, Elinor L; Takahashi, Diana; McCurdy, Carrie E; Comstock, Sarah; Baquero, Karalee; Blundell, Peter; Frias, Antonio E; Kahr, Maike; Suter, Melissa; Wesolowski, Stephanie; Friedman, Jacob E; Grove, Kevin L; Aagaard, Kjersti M | Scientific reports. | 27811965 | 2016 Nov 04; |
| Designing DNA Nanotube Liquid Crystals as a Weak-Alignment Medium for NMR Structure Determination of Membrane Proteins. | Min, John; Shih, William M; Bellot, Gaëtan | Methods in molecular biology (Clifton, N.J.). | 27813010 | 2017; |
| Confined Growth of Metal Nanoparticles Within 3D DNA Origami Molds. | Sun, Wei; Shen, Jie | Methods in molecular biology (Clifton, N.J.). | 27813012 | 2017; |
| CRISPR/Cas9 Editing of Murine Induced Pluripotent Stem Cells for Engineering Inflammation-Resistant Tissues. | Brunger, Jonathan M; Zutshi, Ananya; Willard, Vincent P; Gersbach, Charles A; Guilak, Farshid | Arthritis & rheumatology (Hoboken, N.J.). | 27813286 | 2017 May; |
| Stem Cell Extracellular Vesicles: Extended Messages of Regeneration. | Riazifar, Milad; Pone, Egest J; Lötvall, Jan; Zhao, Weian | Annual review of pharmacology and toxicology. | 27814025 | 2017 Jan 06; |
| Tensor Analysis Reveals Distinct Population Structure that Parallels the Different Computational Roles of Areas M1 and V1. | Seely, Jeffrey S; Kaufman, Matthew T; Ryu, Stephen I; Shenoy, Krishna V; Cunningham, John P; Churchland, Mark M | PLoS computational biology. | 27814353 | 2016 Nov; |
| Intracellular TG2 Activity Increases Microtubule Stability but is not Sufficient to Prompt Neurite Growth. | Guo, Shunling; Palanski, Brad A; Kloeck, Cornelius; Khosla, Chaitan; Cui, Bianxiao | Neuroscience bulletin. | 27815680 | 2017 Feb; |
| Shotgun Metagenomics of 250 Adult Twins Reveals Genetic and Environmental Impacts on the Gut Microbiome. | Xie, Hailiang; Guo, Ruijin; Zhong, Huanzi; Feng, Qiang; Lan, Zhou; Qin, Bingcai; Ward, Kirsten J; Jackson, Matthew A; Xia, Yan; Chen, Xu; Chen, Bing; Xia, Huihua; Xu, Changlu; Li, Fei; Xu, Xun; Al-Aama, Jumana Yousuf; Yang, Huanming; Wang, Jian; Kristians | Cell systems | 27818083 | 2016 Dec 21 |
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| Biologically Inspired Smart Release System Based on 3D Bioprinted Perfused Scaffold for Vascularized Tissue Regeneration. | Cui, Haitao; Zhu, Wei; Holmes, Benjamin; Zhang, Lijie Grace | Advanced science (Weinheim, Baden-Wurttemberg, Germany). | 27818910 | 2016 Aug; |
| SCAI promotes DNA double-strand break repair in distinct chromosomal contexts. | Hansen, Rebecca Kring; Mund, Andreas; Poulsen, Sara Lund; Sandoval, Maria; Klement, Karolin; Tsouroula, Katerina; Tollenaere, Maxim A X; Räschle, Markus; Soria, Rebeca; Offermanns, Stefan; Worzfeld, Thomas; Grosse, Robert; Brandt, Dominique T; Rozell, Bjö | Nature cell biology. | 27820601 | 2016 Dec; |
| Non-classical transpeptidases yield insight into new antibacterials. | Kumar, Pankaj; Kaushik, Amit; Lloyd, Evan P; Li, Shao-Gang; Mattoo, Rohini; Ammerman, Nicole C; Bell, Drew T; Perryman, Alexander L; Zandi, Trevor A; Ekins, Sean; Ginell, Stephan L; Townsend, Craig A; Freundlich, Joel S; Lamichhane, Gyanu | Nature chemical biology. | 27820797 | 2017 Jan; |
| Multidimensional chemical control of CRISPR-Cas9. | Maji, Basudeb; Moore, Christopher L; Zetsche, Bernd; Volz, Sara E; Zhang, Feng; Shoulders, Matthew D; Choudhary, Amit | Nature chemical biology. | 27820801 | 2017 Jan; |
| Oxidative guanine base damage regulates human telomerase activity. | Fouquerel, Elise; Lormand, Justin; Bose, Arindam; Lee, Hui-Ting; Kim, Grace S; Li, Jianfeng; Sobol, Robert W; Freudenthal, Bret D; Myong, Sua; Opresko, Patricia L | Nature structural & molecular biology. | 27820808 | 2016 Dec; |
| Cell chirality: emergence of asymmetry from cell culture. | Wan, Leo Q; Chin, Amanda S; Worley, Kathryn E; Ray, Poulomi | Philosophical transactions of the Royal Society of London. Series B, Biological sciences. | 27821525 | 2016 Dec 19; |
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| Distinct biological subtypes and patterns of genome evolution in lymphoma revealed by circulating tumor DNA. | Scherer, Florian; Kurtz, David M; Newman, Aaron M; Stehr, Henning; Craig, Alexander F M; Esfahani, Mohammad Shahrokh; Lovejoy, Alexander F; Chabon, Jacob J; Klass, Daniel M; Liu, Chih Long; Zhou, Li; Glover, Cynthia; Visser, Brendan C; Poultsides, George | Science translational medicine. | 27831904 | 2016 Nov 09; |
| Evolution of Fitness Cost-Neutral Mutant PfCRT Conferring P. falciparum 4-Aminoquinoline Drug Resistance Is Accompanied by Altered Parasite Metabolism and Digestive Vacuole Physiology. | Gabryszewski, Stanislaw J; Dhingra, Satish K; Combrinck, Jill M; Lewis, Ian A; Callaghan, Paul S; Hassett, Matthew R; Siriwardana, Amila; Henrich, Philipp P; Lee, Andrew H; Gnädig, Nina F; Musset, Lise; Llinás, Manuel; Egan, Timothy J; Roepe, Paul D; Fido | PLoS pathogens. | 27832198 | 2016 Nov; |
| Sustained Delivery of Timolol Maleate for Over 90 Days by Subconjunctival Injection. | Lavik, Erin; Kuehn, Markus H; Shoffstall, Andrew J; Atkins, Kristyn; Dumitrescu, Alina V; Kwon, Young H | Journal of ocular pharmacology and therapeutics : the official journal of the Association for Ocular Pharmacology and Therapeutics. | 27835065 | 2016 12; |
| Testing a videogame intervention to recalibrate physician heuristics in trauma triage: study protocol for a randomized controlled trial. | Mohan, Deepika; Rosengart, Matthew R; Fischhoff, Baruch; Angus, Derek C; Farris, Coreen; Yealy, Donald M; Wallace, David J; Barnato, Amber E | BMC emergency medicine. | 27835981 | 2016 Nov 11; |
| Insights from imaging the implanting embryo and the uterine environment in three dimensions. | Arora, Ripla; Fries, Adam; Oelerich, Karina; Marchuk, Kyle; Sabeur, Khalida; Giudice, Linda C; Laird, Diana J | Development (Cambridge, England). | 27836961 | 2016 12 15; |
| The tbx2a/b transcription factors direct pronephros segmentation and corpuscle of Stannius formation in zebrafish. | Drummond, Bridgette E; Li, Yue; Marra, Amanda N; Cheng, Christina N; Wingert, Rebecca A | Developmental biology | 27840199 | 2017 Jan 01 |
| Defensins, lectins, mucins, and secretory immunoglobulin A: microbe-binding biomolecules that contribute to mucosal immunity in the human gut. | Chairatana, Phoom; Nolan, Elizabeth M | Critical reviews in biochemistry and molecular biology. | 27841019 | 2017 Feb; |
| Kinetic Modeling of ABCG2 Transporter Heterogeneity: A Quantitative, Single-Cell Analysis of the Side Population Assay. | Prasanphanich, Adam F; White, Douglas E; Gran, Margaret A; Kemp, Melissa L | PLoS computational biology. | 27851764 | 2016 Nov; |
| Pancreatic Inflammation Redirects Acinar to ? Cell Reprogramming. | Clayton, Hannah W; Osipovich, Anna B; Stancill, Jennifer S; Schneider, Judsen D; Vianna, Pedro G; Shanks, Carolyn M; Yuan, Weiping; Gu, Guoqiang; Manduchi, Elisabetta; Stoeckert Jr, Christian J; Magnuson, Mark A | Cell reports. | 27851966 | 2016 11 15; |
| Dampened antiviral immunity to intravaginal exposure to RNA viral pathogens allows enhanced viral replication. | Khan, Shahzada; Woodruff, Erik M; Trapecar, Martin; Fontaine, Krystal A; Ezaki, Ashley; Borbet, Timothy C; Ott, Melanie; Sanjabi, Shomyseh | The Journal of experimental medicine. | 27852793 | 2016 Dec 12; |
| Gleaning Insights from Fecal Microbiota Transplantation and Probiotic Studies for the Rational Design of Combination Microbial Therapies. | Hudson, Lauren E; Anderson, Sarah E; Corbett, Anita H; Lamb, Tracey J | Clinical microbiology reviews. | 27856521 | 2017 Jan; |
| The incorporation of microfluidics into circulating tumor cell isolation for clinical applications. | Kozminsky, Molly; Wang, Yang; Nagrath, Sunitha | Current opinion in chemical engineering. | 27857883 | 2016 Feb; |
| Human dendritic cells (DCs) are derived from distinct circulating precursors that are precommitted to become CD1c+ or CD141+ DCs. | Breton, Gaëlle; Zheng, Shiwei; Valieris, Renan; Tojal da Silva, Israel; Satija, Rahul; Nussenzweig, Michel C | The Journal of experimental medicine. | 27864467 | 2016 Dec 12; |
| Variability in a Short Tandem Repeat Mediates Complex Epistatic Interactions in Arabidopsis thaliana. | Press, Maximilian Oliver; Queitsch, Christine | Genetics. | 27866166 | 2017 01; |
| The genome of Onchocerca volvulus, agent of river blindness. | Cotton, James A; Bennuru, Sasisekhar; Grote, Alexandra; Harsha, Bhavana; Tracey, Alan; Beech, Robin; Doyle, Stephen R; Dunn, Matthew; Hotopp, Julie C Dunning; Holroyd, Nancy; Kikuchi, Taisei; Lambert, Olivia; Mhashilkar, Amruta; Mutowo, Prudence; Nursimulu, Nirvana; Ribeiro, Jose M C; Rogers, Matthew B; Stanley, Eleanor; Swapna, Lakshmipuram S; Tsai, Isheng J; Unnasch, Thomas R; Voronin, Denis; Parkinson, John; Nutman, Thomas B; Ghedin, Elodie; Berriman, Matthew; Lustigman, Sara | Nature microbiology. | 27869790 | 2016 Nov 21; |
| A rapidly acting glutamatergic ARC?PVH satiety circuit postsynaptically regulated by ?-MSH. | Fenselau, Henning; Campbell, John N; Verstegen, Anne M J; Madara, Joseph C; Xu, Jie; Shah, Bhavik P; Resch, Jon M; Yang, Zongfang; Mandelblat-Cerf, Yael; Livneh, Yoav; Lowell, Bradford B | Nature neuroscience. | 27869800 | 2017 Jan; |
| A cycle of Zap70 kinase activation and release from the TCR amplifies and disperses antigenic stimuli. | Katz, Zachary B; Novotná, Lucie; Blount, Amy; Lillemeier, Björn F | Nature immunology. | 27869819 | 2017 Jan; |
| Inactivation of Capicua drives cancer metastasis. | Okimoto, Ross A; Breitenbuecher, Frank; Olivas, Victor R; Wu, Wei; Gini, Beatrice; Hofree, Matan; Asthana, Saurabh; Hrustanovic, Gorjan; Flanagan, Jennifer; Tulpule, Asmin; Blakely, Collin M; Haringsma, Henry J; Simmons, Andrew D; Gowen, Kyle; Suh, James; | Nature genetics. | 27869830 | 2017 Jan; |
| ABO antigen and secretor statuses are not associated with gut microbiota composition in 1,500 twins. | Davenport, Emily R; Goodrich, Julia K; Bell, Jordana T; Spector, Tim D; Ley, Ruth E; Clark, Andrew G | BMC genomics. | 27871240 | 2016 11 21; |
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| Cell biology: Double agents for mitochondrial division. | McBride, Heidi M; Frost, Adam | Nature. | 27880759 | 2016 12 01; |
| Emergence of a Wave of Wnt Signaling that Regulates Lung Alveologenesis by Controlling Epithelial Self-Renewal and Differentiation. | Frank, David B; Peng, Tien; Zepp, Jarod A; Snitow, Melinda; Vincent, Tiffaney L; Penkala, Ian J; Cui, Zheng; Herriges, Michael J; Morley, Michael P; Zhou, Su; Lu, Min Min; Morrisey, Edward E | Cell reports. | 27880906 | 2016 11 22; |
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| Circular Dichroism Spectroscopy of Collagen Fibrillogenesis: A New Use for an Old Technique. | Drzewiecki, Kathryn E; Grisham, Daniel R; Parmar, Avanish S; Nanda, Vikas; Shreiber, David I | Biophysical journal. | 27926839 | 2016 Dec 06; |
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| A Mechanistic Model for Colibactin-Induced Genotoxicity. | Healy, Alan R; Nikolayevskiy, Herman; Patel, Jaymin R; Crawford, Jason M; Herzon, Seth B | Journal of the American Chemical Society. | 27934011 | 2016 Dec 07; |
| Tailoring Nanostructure Morphology for Enhanced Targeting of Dendritic Cells in Atherosclerosis. | Yi, Sijia; Allen, Sean David; Liu, Yu-Gang; Ouyang, Brian Zhou; Li, Xiaomo; Augsornworawat, Punn; Thorp, Edward Benjamin; Scott, Evan Alexander | ACS nano. | 27935698 | 2016 Dec 27; |
| Microglia activation in a pediatric rabbit model of tuberculous meningitis. | Tucker, Elizabeth W; Pokkali, Supriya; Zhang, Zhi; DeMarco, Vincent P; Klunk, Mariah; Smith, Elizabeth S; Ordonez, Alvaro A; Penet, Marie-France; Bhujwalla, Zaver; Jain, Sanjay K; Kannan, Sujatha | Disease models & mechanisms. | 27935825 | 2016 Dec 01; |
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| A Multi-step Transcriptional and Chromatin State Cascade Underlies Motor Neuron Programming from Embryonic Stem Cells. | Velasco, Silvia; Ibrahim, Mahmoud M; Kakumanu, Akshay; Garipler, Görkem; Aydin, Begüm; Al-Sayegh, Mohamed Ahmed; Hirsekorn, Antje; Abdul-Rahman, Farah; Satija, Rahul; Ohler, Uwe; Mahony, Shaun; Mazzoni, Esteban O | Cell stem cell. | 27939218 | 2017 Feb 02; |
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| RB localizes to DNA double-strand breaks and promotes DNA end resection and homologous recombination through the recruitment of BRG1. | Vélez-Cruz, Renier; Manickavinayaham, Swarnalatha; Biswas, Anup K; Clary, Regina Weaks; Premkumar, Tolkappiyan; Cole, Francesca; Johnson, David G | Genes & development. | 27940962 | 2016 Nov 15; |
| Control of cerebral ischemia with magnetic nanoparticles. | Jia, Jie-Min; Chowdary, Praveen D; Gao, Xiaofei; Ci, Bo; Li, Wenjun; Mulgaonkar, Aditi; Plautz, Erik J; Hassan, Gedaa; Kumar, Amit; Stowe, Ann M; Yang, Shao-Hua; Zhou, Wei; Sun, Xiankai; Cui, Bianxiao; Ge, Woo-Ping | Nature methods. | 27941784 | 2017 Feb; |
| Smarca4 ATPase mutations disrupt direct eviction of PRC1 from chromatin. | Stanton, Benjamin Z; Hodges, Courtney; Calarco, Joseph P; Braun, Simon M G; Ku, Wai Lim; Kadoch, Cigall; Zhao, Keji; Crabtree, Gerald R | Nature genetics. | 27941795 | 2017 Feb; |
| Dynamics of BAF-Polycomb complex opposition on heterochromatin in normal and oncogenic states. | Kadoch, Cigall; Williams, Robert T; Calarco, Joseph P; Miller, Erik L; Weber, Christopher M; Braun, Simon M G; Pulice, John L; Chory, Emma J; Crabtree, Gerald R | Nature genetics. | 27941796 | 2017 Feb; |
| Genome-wide CRISPR Screen Identifies Regulators of MAPK as Suppressors of Liver Tumors in Mice. | Song, Chun-Qing; Li, Yingxiang; Mou, Haiwei; Moore, Jill; Park, Angela; Pomyen, Yotsawat; Hough, Soren; Kennedy, Zachary; Fischer, Andrew; Yin, Hao; Anderson, Daniel G; Conte Jr, Darryl; Zender, Lars; Wang, Xin Wei; Thorgeirsson, Snorri; Weng, Zhiping; Xu | Gastroenterology. | 27956228 | 2016 Dec 09; |
| High-throughput Identification of DNA-Encoded IgG Ligands that Distinguish Active and Latent Mycobacterium tuberculosis Infections. | Mendes, Kimberly R; Malone, Marie Lynne; Ndungu, John Maina; Suponitsky-Kroyter, Irena; Cavett, Valerie J; McEnaney, Patrick J; MacConnell, Andrew B; Doran, Todd M; Ronacher, Katharina; Stanley, Kim; Utset, Ofelia; Walzl, Gerhard; Paegel, Brian M; Kodadek, Thomas | ACS chemical biology. | 27957856 | 2017 Jan 20; |
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| Reversible aggregation of HIV-1 Gag proteins mediated by nucleic acids. | Chen, Zhilin; Cheng, Wei | Biochemical and biophysical research communications. | 27965093 | 2017 Jan 22; |
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| Serotonin 1B Receptors Regulate Prefrontal Function by Gating Callosal and Hippocampal Inputs. | Kjaerby, Celia; Athilingam, Jegath; Robinson, Sarah E; Iafrati, Jillian; Sohal, Vikaas S | Cell reports. | 27974203 | 2016 Dec 13; |
| Sphingosine 1-phosphate receptor 1 regulates the directional migration of lymphatic endothelial cells in response to fluid shear stress. | Surya, Vinay N; Michalaki, Eleftheria; Huang, Eva Y; Fuller, Gerald G; Dunn, Alexander R | Journal of the Royal Society, Interface. | 27974574 | 2016 12; |
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| Bidirectional Anticipation of Future Osmotic Challenges by Vasopressin Neurons. | Mandelblat-Cerf, Yael; Kim, Angela; Burgess, Christian R; Subramanian, Siva; Tannous, Bakhos A; Lowell, Bradford B; Andermann, Mark L | Neuron. | 27989461 | 2017 Jan 04; |
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| The XBP1 Arm of the Unfolded Protein Response Induces Fibrogenic Activity in Hepatic Stellate Cells Through Autophagy. | Kim, Rosa S; Hasegawa, Daisuke; Goossens, Nicolas; Tsuchida, Takuma; Athwal, Varinder; Sun, Xiaochen; Robinson, Christopher L; Bhattacharya, Dipankar; Chou, Hsin-I; Zhang, David Y; Fuchs, Bryan C; Lee, Youngmin; Hoshida, Yujin; Friedman, Scott L | Scientific reports. | 27996033 | 2016 Dec 20; |
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| Cell-Based Screen Identifies Human Interferon-Stimulated Regulators of Listeria monocytogenes Infection. | Perelman, Sofya S; Abrams, Michael E; Eitson, Jennifer L; Chen, Didi; Jimenez, Alyssa; Mettlen, Marcel; Schoggins, John W; Alto, Neal M | PLoS pathogens. | 28002492 | 2016 Dec; |
| Primate-specific oestrogen-responsive long non-coding RNAs regulate proliferation and viability of human breast cancer cells. | Lin, Chin-Yo; Kleinbrink, Erica L; Dachet, Fabien; Cai, Juan; Ju, Donghong; Goldstone, Amanda; Wood, Emily J; Liu, Ka; Jia, Hui; Goustin, Anton-Scott; Kosir, Mary A; Thepsuwan, Pattaraporn; Lipovich, Leonard | Open biology. | 28003470 | 2016 12; |
| Clinical Implementation of Integrated Genomic Profiling in Patients with Advanced Cancers. | Borad, Mitesh J; Egan, Jan B; Condjella, Rachel M; Liang, Winnie S; Fonseca, Rafael; Ritacca, Nicole R; McCullough, Ann E; Barrett, Michael T; Hunt, Katherine S; Champion, Mia D; Patel, Maitray D; Young, Scott W; Silva, Alvin C; Ho, Thai H; Halfdanarson, | Scientific reports. | 28003660 | 2016 12; |
| Reprogramming the immunological microenvironment through radiation and targeting Axl. | Aguilera, Todd A; Rafat, Marjan; Castellini, Laura; Shehade, Hussein; Kariolis, Mihalis S; Hui, Angela Bik-Yu; Stehr, Henning; von Eyben, Rie; Jiang, Dadi; Ellies, Lesley G; Koong, Albert C; Diehn, Maximilian; Rankin, Erinn B; Graves, Edward E; Giaccia, A | Nature communications. | 28008921 | 2016 Dec 23; |
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| Integrative Analysis of PRKAG2 Cardiomyopathy iPS and Microtissue Models Identifies AMPK as a Regulator of Metabolism, Survival, and Fibrosis. | Hinson, J Travis; Chopra, Anant; Lowe, Andre; Sheng, Calvin C; Gupta, Rajat M; Kuppusamy, Rajarajan; O'Sullivan, John; Rowe, Glenn; Wakimoto, Hiroko; Gorham, Joshua; Zhang, Kehan; Musunuru, Kiran; Gerszten, Robert E; Wu, Sean M; Chen, Christopher S; Seidman, Jonathan G; Seidman, Christine E | Cell reports. | 28009297 | 2016 Dec 20; |
| Cardiac sympathetic innervation via middle cervical and stellate ganglia and antiarrhythmic mechanism of bilateral stellectomy. | Irie, Tadanobu; Yamakawa, Kentaro; Hamon, David; Nakamura, Keijiro; Shivkumar, Kalyanam; Vaseghi, Marmar | American journal of physiology. Heart and circulatory physiology. | 28011590 | 2017 Mar 01; |
| Mutations in Cas9 Enhance the Rate of Acquisition of Viral Spacer Sequences during the CRISPR-Cas Immune Response. | Heler, Robert; Wright, Addison V; Vucelja, Marija; Bikard, David; Doudna, Jennifer A; Marraffini, Luciano A | Molecular cell. | 28017588 | ; |
| NKG2A-Expressing Natural Killer Cells Dominate the Response to Autologous Lymphoblastoid Cells Infected with Epstein-Barr Virus. | Hatton, Olivia; Strauss-Albee, Dara Marie; Zhao, Nancy Q; Haggadone, Mikel D; Pelpola, Judith Shanika; Krams, Sheri M; Martinez, Olivia M; Blish, Catherine A | Frontiers in immunology. | 28018364 | 2016; |
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| Driving gene-engineered T cell immunotherapy of cancer. | Johnson, Laura A; June, Carl H | Cell research. | 28025979 | 2017 Jan; |
| Cognitive Complaints in Survivors of Breast Cancer After Chemotherapy Compared With Age-Matched Controls: An Analysis From a Nationwide, Multicenter, Prospective Longitudinal Study. | Janelsins, Michelle C; Heckler, Charles E; Peppone, Luke J; Kamen, Charles; Mustian, Karen M; Mohile, Supriya G; Magnuson, Allison; Kleckner, Ian R; Guido, Joseph J; Young, Kelley L; Conlin, Alison K; Weiselberg, Lora R; Mitchell, Jerry W; Ambrosone, Chri | Journal of clinical oncology : official journal of the American Society of Clinical Oncology. | 28029304 | 2016 Dec 28; |
| Self-Transcendent Values and Neural Responses to Threatening Health Messages. | Kang, Yoona; O'Donnell, Matthew Brook; Strecher, Victor J; Taylor, Shelley E; Lieberman, Matthew D; Falk, Emily B | Psychosomatic medicine. | 28033199 | 2016 Dec 28; |
| Tooth-Matrix Biomarkers to Reconstruct Critical Periods of Brain Plasticity. | Morishita, Hirofumi; Arora, Manish | Trends in neurosciences. | 28038829 | 2017 Jan; |
| The Accelerated Evolution of Lagging Strand Genes Is Independent of Sequence Context. | Merrikh, Christopher N; Weiss, Eli; Merrikh, Houra | Genome biology and evolution. | 28039230 | 2016 Nov 15; |
| Spatiotemporal Control of Intracellular Phase Transitions Using Light-Activated optoDroplets. | Shin, Yongdae; Berry, Joel; Pannucci, Nicole; Haataja, Mikko P; Toettcher, Jared E; Brangwynne, Clifford P | Cell. | 28041848 | 2017 Jan 12; |
| Dynamic, Cell-Type-Specific Roles for GABAergic Interneurons in a Mouse Model of Optogenetically Inducible Seizures. | Khoshkhoo, Sattar; Vogt, Daniel; Sohal, Vikaas S | Neuron. | 28041880 | 2017 Jan 18; |
| PCR-activated cell sorting as a general, cultivation-free method for high-throughput identification and enrichment of virus hosts. | Lim, Shaun W; Lance, Shea T; Stedman, Kenneth M; Abate, Adam R | Journal of virological methods. | 28042018 | 2017 Apr; |
| The Role of Regulatory Domains in Maintaining Autoinhibition in the Multidomain Kinase PKC?. | Sommese, Ruth F; Ritt, Michael; Swanson, Carter J; Sivaramakrishnan, Sivaraj | The Journal of biological chemistry. | 28049730 | 2017 02 17; |
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| A Precise Genome Editing Method Reveals Insights into the Activity of Eukaryotic Promoters. | Elison, Gregory L; Song, Ruijie; Acar, Murat | Cell reports. | 28052256 | 2017 Jan 03; |
| miR-125b promotes MLL-AF9-driven murine acute myeloid leukemia involving a VEGFA-mediated non-cell-intrinsic mechanism. | Liu, Jun; Guo, Bo; Chen, Zhuo; Wang, Nayi; Iacovino, Michelina; Cheng, Jijun; Roden, Christine; Pan, Wen; Khan, Sajid; Chen, Suning; Kyba, Michael; Fan, Rong; Guo, Shangqin; Lu, Jun | Blood | 28053194 | 2017 03 16 |
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| The long non-coding RNA NEAT1 is responsive to neuronal activity and is associated with hyperexcitability states. | Barry, Guy; Briggs, James A; Hwang, Do Won; Nayler, Sam P; Fortuna, Patrick R J; Jonkhout, Nicky; Dachet, Fabien; Maag, Jesper L V; Mestdagh, Pieter; Singh, Erin M; Avesson, Lotta; Kaczorowski, Dominik C; Ozturk, Ezgi; Jones, Nigel C; Vetter, Irina; Arriola-Martinez, Luis; Hu, Jianfei; Franco, Gloria R; Warn, Victoria M; Gong, Andrew; Dinger, Marcel E; Rigo, Frank; Lipovich, Leonard; Morris, Margaret J; O'Brien, Terence J; Lee, Dong Soo; Loeb, Jeffrey A; Blackshaw, Seth; Mattick, John S; Wolvetang, Ernst J | Scientific reports | 28054653 | 2017 01 05 |
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| Preliminary Experiments with a Unified Controller for a Powered Knee-Ankle Prosthetic Leg Across Walking Speeds. | Quintero, David; Villarreal, Dario J; Gregg, Robert D | Proceedings of the ... IEEE/RSJ International Conference on Intelligent Robots and Systems. IEEE/RSJ International Conference on Intelligent Robots and Systems. | 28392969 | 2016 Oct; |
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| DNA Methyltransferases Demonstrate Reduced Activity against Arabinosylcytosine: Implications for Epigenetic Instability in Acute Myeloid Leukemia. | Nabel, Christopher S; DeNizio, Jamie E; Carroll, Martin; Kohli, Rahul M | Biochemistry. | 28394581 | 2017 Apr 25; |
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| Common marmoset (Callithrix jacchus) as a primate model for behavioral neuroscience studies. | Prins, Noeline W; Pohlmeyer, Eric A; Debnath, Shubham; Mylavarapu, Ramanamurthy; Geng, Shijia; Sanchez, Justin C; Rothen, Daniel; Prasad, Abhishek | Journal of neuroscience methods. | 28400103 | 2017 Jun 01; |
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| Co-targeting of DNA, RNA, and protein molecules provides optimal outcomes for treating osteosarcoma and pulmonary metastasis in spontaneous and experimental metastasis mouse models. | Jian, Chao; Tu, Mei-Juan; Ho, Pui Yan; Duan, Zhijian; Zhang, Qianyu; Qiu, Jing-Xin; DeVere White, Ralph W; Wun, Theodore; Lara, Primo N; Lam, Kit S; Yu, Ai-Xi; Yu, Ai-Ming | Oncotarget. | 28415566 | 2017 May 09; |
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| Comprehensive performance comparison of high-resolution array platforms for genome-wide Copy Number Variation (CNV) analysis in humans. | Haraksingh, Rajini R; Abyzov, Alexej; Urban, Alexander Eckehart | BMC genomics | 28438122 | 2017 04 24 |
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| Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide. | Shi, Zhen; Fujii, Kotaro; Kovary, Kyle M; Genuth, Naomi R; Röst, Hannes L; Teruel, Mary N; Barna, Maria | Molecular cell. | 28625553 | 2017 Jul 06; |
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| wtf genes are prolific dual poison-antidote meiotic drivers. | Nuckolls, Nicole L; Bravo Núñez, María Angélica; Eickbush, Michael T; Young, Janet M; Lange, Jeffrey J; Yu, Jonathan S; Smith, Gerald R; Jaspersen, Sue L; Malik, Harmit S; Zanders, Sarah E | eLife | 28631612 | 2017 06 20 |
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| Biosynthesis of isonitrile lipopeptides by conserved nonribosomal peptide synthetase gene clusters in Actinobacteria. | Harris, Nicholas C; Sato, Michio; Herman, Nicolaus A; Twigg, Frederick; Cai, Wenlong; Liu, Joyce; Zhu, Xuejun; Downey, Jordan; Khalaf, Ryan; Martin, Joelle; Koshino, Hiroyuki; Zhang, Wenjun | Proceedings of the National Academy of Sciences of the United States of America. | 28634299 | 2017 Jul 03; |
| A Nanostructured Microfluidic Immunoassay Platform for Highly Sensitive Infectious Pathogen Detection. | Yu, Xu; Xia, Yiqiu; Tang, Yi; Zhang, Wen-Long; Yeh, Yin-Ting; Lu, Huaguang; Zheng, Si-Yang | Small (Weinheim an der Bergstrasse, Germany). | 28636164 | 2017 06; |
| Types of Shade Vary in Protection Just Like Sunscreens. | Opene, Caroline; Chren, Mary-Margaret; Linos, Eleni | JAMA dermatology. | 28636687 | 2017 Oct 01; |
| A Kepler Workflow Tool for Reproducible AMBER GPU Molecular Dynamics. | Purawat, Shweta; Ieong, Pek U; Malmstrom, Robert D; Chan, Garrett J; Yeung, Alan K; Walker, Ross C; Altintas, Ilkay; Amaro, Rommie E | Biophysical journal. | 28636905 | 2017 Jun 20; |
| Anti-proliferative therapy for HIV cure: a compound interest approach. | Reeves, Daniel B; Duke, Elizabeth R; Hughes, Sean M; Prlic, Martin; Hladik, Florian; Schiffer, Joshua T | Scientific reports. | 28638104 | 2017 Jun 21; |
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| Cardiac Sympathetic Denervation for Refractory Ventricular Arrhythmias. | Vaseghi, Marmar; Barwad, Parag; Malavassi Corrales, Federico J; Tandri, Harikrishna; Mathuria, Nilesh; Shah, Rushil; Sorg, Julie M; Gima, Jean; Mandal, Kaushik; Sàenz Morales, Luis C; Lokhandwala, Yash; Shivkumar, Kalyanam | Journal of the American College of Cardiology. | 28641796 | 2017 Jun 27; |
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| Advances in Decoding Axolotl Limb Regeneration. | Haas, Brian J; Whited, Jessica L | Trends in genetics : TIG. | 28648452 | 2017 Aug; |
| A light- and calcium-gated transcription factor for imaging and manipulating activated neurons. | Wang, Wenjing; Wildes, Craig P; Pattarabanjird, Tanyaporn; Sanchez, Mateo I; Glober, Gordon F; Matthews, Gillian A; Tye, Kay M; Ting, Alice Y | Nature biotechnology. | 28650461 | 2017 Jun 26; |
| Tunable delayed controlled release profile from layered polymeric microparticles. | Dutta, D; Fauer, C; Hickey, K; Salifu, M; Stabenfeldt, S E | Journal of materials chemistry. B, Materials for biology and medicine. | 28652916 | 2017 Jun 21; |
| The endoplasmic reticulum HSP40 co-chaperone ERdj3/DNAJB11 assembles and functions as a tetramer. | Chen, Kai-Chun; Qu, Song; Chowdhury, Saikat; Noxon, Isabelle C; Schonhoft, Joseph D; Plate, Lars; Powers, Evan T; Kelly, Jeffery W; Lander, Gabriel C; Wiseman, R Luke | The EMBO journal. | 28655754 | 2017 Aug 01; |
| Simultaneous Enhancement of Photoluminescence, MRI Relaxivity, and CT Contrast by Tuning the Interfacial Layer of Lanthanide Heteroepitaxial Nanoparticles. | He, Sha; Johnson, Noah J J; Nguyen Huu, Viet Anh; Cory, Esther; Huang, Yuran; Sah, Robert L; Jokerst, Jesse V; Almutairi, Adah | Nano letters. | 28657755 | 2017 Aug 09; |
| A Prospective Study of Age-dependent Changes in Propofol-induced Electroencephalogram Oscillations in Children. | Lee, Johanna M; Akeju, Oluwaseun; Terzakis, Kristina; Pavone, Kara J; Deng, Hao; Houle, Timothy T; Firth, Paul G; Shank, Erik S; Brown, Emery N; Purdon, Patrick L | Anesthesiology. | 28657957 | 2017 08; |
| Correlation Among Cancer Incidence and Mortality Rates and Internet Searches in the United States. | Wehner, Mackenzie R; Nead, Kevin T; Linos, Eleni | JAMA dermatology. | 28658470 | 2017 Sep 01; |
| An Integrative Framework Reveals Signaling-to-Transcription Events in Toll-like Receptor Signaling. | Mertins, Philipp; Przybylski, Dariusz; Yosef, Nir; Qiao, Jana; Clauser, Karl; Raychowdhury, Raktima; Eisenhaure, Thomas M; Maritzen, Tanja; Haucke, Volker; Satoh, Takashi; Akira, Shizuo; Carr, Steven A; Regev, Aviv; Hacohen, Nir; Chevrier, Nicolas | Cell reports. | 28658630 | 2017 Jun 27; |
| Monoaminergic integration of diet and social signals in the brains of juvenile spadefoot toads. | Burmeister, Sabrina S; Rodriguez Moncalvo, Verónica G; Pfennig, Karin S | The Journal of experimental biology. | 28659306 | 2017 09 01; |
| Molecular Simulations Reveal an Unresolved Conformation of the Type IA Protein Kinase A Regulatory Subunit and Suggest Its Role in the cAMP Regulatory Mechanism. | Hirakis, Sophia P; Malmstrom, Robert D; Amaro, Rommie E | Biochemistry. | 28661131 | 2017 08 01; |
| Polydopamine Nanoparticles for Combined Chemo- and Photothermal Cancer Therapy. | Zhu, Zhijun; Su, Ming | Nanomaterials (Basel, Switzerland) | 28661423 | 2017 Jun 29 |
| Multiplex Aptamer Discovery through Apta-Seq and Its Application to ATP Aptamers Derived from Human-Genomic SELEX. | Abdelsayed, Michael M; Ho, Bao T; Vu, Michael M K; Polanco, Julio; Spitale, Robert C; Lupták, Andrej | ACS chemical biology. | 28661647 | 2017 Aug 18; |
| Bacterial Cell Mechanics. | Auer, George K; Weibel, Douglas B | Biochemistry. | 28666084 | 2017 07 25; |
| IFN?-Dependent Tissue-Immune Homeostasis Is Co-opted in the Tumor Microenvironment. | Nirschl, Christopher J; Suárez-Fariñas, Mayte; Izar, Benjamin; Prakadan, Sanjay; Dannenfelser, Ruth; Tirosh, Itay; Liu, Yong; Zhu, Qian; Devi, K Sanjana P; Carroll, Shaina L; Chau, David; Rezaee, Melika; Kim, Tae-Gyun; Huang, Ruiqi; Fuentes-Duculan, Judil | Cell. | 28666115 | 2017 Jun 29; |
| Engineered AAVs for efficient noninvasive gene delivery to the central and peripheral nervous systems. | Chan KY, Jang MJ, Yoo BB, Greenbaum A, Ravi N, Wu WL, Sánchez-Guardado L, Lois C, Mazmanian SK, Deverman BE, Gradinaru V. | Nat Neurosci | 28671695 | 2017 Jun 26 |
| Host determinants of adeno-associated viral vector entry. | Pillay, Sirika; Carette, Jan E | Current opinion in virology. | 28672171 | 2017 Jun; |
| Impact of the North American Free Trade Agreement on high-fructose corn syrup supply in Canada: a natural experiment using synthetic control methods. | Barlow, Pepita; McKee, Martin; Basu, Sanjay; Stuckler, David | CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne. | 28676578 | 2017 Jul 04; |
| Collagen mimetic peptide discs promote assembly of a broad range of natural protein fibers through hydrophobic interactions. | McGuinness, Kenneth; Nanda, Vikas | Organic & biomolecular chemistry. | 28678287 | 2017 Jul 19; |
| Nutrient sensing modulates malaria parasite virulence. | Mancio-Silva, Liliana; Slavic, Ksenija; Grilo Ruivo, Margarida T; Grosso, Ana Rita; Modrzynska, Katarzyna K; Vera, Iset Medina; Sales-Dias, Joana; Gomes, Ana Rita; MacPherson, Cameron Ross; Crozet, Pierre; Adamo, Mattia; Baena-Gonzalez, Elena; Tewari, Rita; Llinás, Manuel; Billker, Oliver; Mota, Maria M | Nature. | 28678779 | 2017 07 13; |
| Invited Commentary: Causal Inference Across Space and Time-Quixotic Quest, Worthy Goal, or Both? | Edwards, Jessie K; Lesko, Catherine R; Keil, Alexander P | American journal of epidemiology. | 28679174 | 2017 Jun 30; |
| AAV serotypes have distinctive interactions with domains of the cellular receptor AAVR. | Pillay, Sirika; Zou, Wei; Cheng, Fang; Puschnik, Andreas S; Meyer, Nancy L; Ganaie, Safder S; Deng, Xuefeng; Wosen, Jonathan E; Davulcu, Omar; Yan, Ziying; Engelhardt, John F; Brown, Kevin E; Chapman, Michael S; Qiu, Jianming; Carette, Jan E | Journal of virology. | 28679762 | 2017 Jul 05; |
| A salt-sensing kinase in T lymphocytes, SGK1, drives hypertension and hypertensive end-organ damage. | Norlander, Allison E; Saleh, Mohamed A; Pandey, Arvind K; Itani, Hana A; Wu, Jing; Xiao, Liang; Kang, Jooeun; Dale, Bethany L; Goleva, Slavina B; Laroumanie, Fanny; Du, Liping; Harrison, David G; Madhur, Meena S | JCI insight. | 28679951 | 2017 Jul 06; |
| Preexisting antibodies can protect against congenital cytomegalovirus infection in monkeys. | Nelson, Cody S; Cruz, Diana Vera; Tran, Dollnovan; Bialas, Kristy M; Stamper, Lisa; Wu, Huali; Gilbert, Margaret; Blair, Robert; Alvarez, Xavier; Itell, Hannah; Chen, Meng; Deshpande, Ashlesha; Chiuppesi, Flavia; Wussow, Felix; Diamond, Don J; Vandergrift | JCI insight. | 28679960 | 2017 Jul 06; |
| Erratum: Parvalbumin-expressing interneurons coordinate hippocampal network dynamics required for memory consolidation. | Ognjanovski, Nicolette; Schaeffer, Samantha; Wu, Jiaxing; Mofakham, Sima; Maruyama, Daniel; Zochowski, Michal; Aton, Sara J | Nature communications. | 28681846 | 2017 07 06; |
| Revealing the Cell-Material Interface with Nanometer Resolution by Focused Ion Beam/Scanning Electron Microscopy. | Santoro, Francesca; Zhao, Wenting; Joubert, Lydia-Marie; Duan, Liting; Schnitker, Jan; van de Burgt, Yoeri; Lou, Hsin-Ya; Liu, Bofei; Salleo, Alberto; Cui, Lifeng; Cui, Yi; Cui, Bianxiao | ACS nano. | 28682058 | 2017 Aug 22; |
| Murine chronic lymph node window for longitudinal intravital lymph node imaging. | Meijer, Eelco F J; Jeong, Han-Sin; Pereira, Ethel R; Ruggieri, Thomas A; Blatter, Cedric; Vakoc, Benjamin J; Padera, Timothy P | Nature protocols. | 28683064 | 2017 Aug; |
| Chromatin-enriched lncRNAs: a novel class of enhancer RNAs. | Gayen, Srimonta; Kalantry, Sundeep | Nature structural & molecular biology. | 28686230 | 2017 07 06; |
| Xist RNA repeat E is essential for ASH2L recruitment to the inactive X and regulates histone modifications and escape gene expression. | Yue, Minghui; Ogawa, Akiyo; Yamada, Norishige; Charles Richard, John Lalith; Barski, Artem; Ogawa, Yuya | PLoS genetics. | 28686623 | 2017 Jul; |
| Mapping Load-Bearing in the Mammalian Spindle Reveals Local Kinetochore Fiber Anchorage that Provides Mechanical Isolation and Redundancy. | Elting, Mary Williard; Prakash, Manu; Udy, Dylan B; Dumont, Sophie | Current biology : CB. | 28690110 | 2017 Jul 24; |
| Sub-100-nm metafluorophores with digitally tunable optical properties self-assembled from DNA. | Woehrstein, Johannes B; Strauss, Maximilian T; Ong, Luvena L; Wei, Bryan; Zhang, David Y; Jungmann, Ralf; Yin, Peng | Science advances. | 28691083 | 2017 Jun; |
| Ly6Clo monocytes drive immunosuppression and confer resistance to anti-VEGFR2 cancer therapy. | Jung, Keehoon; Heishi, Takahiro; Khan, Omar F; Kowalski, Piotr S; Incio, Joao; Rahbari, Nuh N; Chung, Euiheon; Clark, Jeffrey W; Willett, Christopher G; Luster, Andrew D; Yun, Seok Hyun; Langer, Robert; Anderson, Daniel G; Padera, Timothy P; Jain, Rakesh K; Fukumura, Dai | The Journal of clinical investigation. | 28691930 | 2017 Aug 01; |
| A broadly distributed toxin family mediates contact-dependent antagonism between gram-positive bacteria. | Whitney, John C; Peterson, S Brook; Kim, Jungyun; Pazos, Manuel; Verster, Adrian J; Radey, Matthew C; Kulasekara, Hemantha D; Ching, Mary Q; Bullen, Nathan P; Bryant, Diane; Goo, Young Ah; Surette, Michael G; Borenstein, Elhanan; Vollmer, Waldemar; Mougous, Joseph D | eLife. | 28696203 | 2017 Jul 11; |
| Sterilizing Effect of Ertapenem-Clavulanate in a Hollow-Fiber Model of Tuberculosis and Implications on Clinical Dosing. | van Rijn, Sander P; Srivastava, Shashikant; Wessels, Mireille A; van Soolingen, Dick; Alffenaar, Jan-Willem C; Gumbo, Tawanda | Antimicrobial agents and chemotherapy. | 28696238 | 2017 Sep; |
| In Vitro Reconstitution of OxyA Enzymatic Activity Clarifies Late Steps in Vancomycin Biosynthesis. | Forneris, Clarissa C; Ozturk, Seyma; Gibson, Marcus I; Sorensen, Erik J; Seyedsayamdost, Mohammad R | ACS chemical biology. | 28696669 | 2017 Sep 15; |
| DGAT1-Dependent Lipid Droplet Biogenesis Protects Mitochondrial Function during Starvation-Induced Autophagy. | Nguyen, Truc B; Louie, Sharon M; Daniele, Joseph R; Tran, Quan; Dillin, Andrew; Zoncu, Roberto; Nomura, Daniel K; Olzmann, James A | Developmental cell. | 28697336 | 2017 Jul 10; |
| Mycobacterium tuberculosis PhoY Proteins Promote Persister Formation by Mediating Pst/SenX3-RegX3 Phosphate Sensing. | Namugenyi, Sarah B; Aagesen, Alisha M; Elliott, Sarah R; Tischler, Anna D | mBio. | 28698272 | 2017 Jul 11; |
| Ammonium chloride alters neuronal excitability and synaptic vesicle release. | Lazarenko, Roman M; DelBove, Claire E; Strothman, Claire E; Zhang, Qi | Scientific reports | 28698583 | 2017 Jul 11 |
| Phospholipid Capped Mesoporous Nanoparticles for Targeted High Intensity Focused Ultrasound Ablation. | Yildirim, Adem; Chattaraj, Rajarshi; Blum, Nicholas T; Shi, Dennis; Kumar, Kaushlendra; Goodwin, Andrew P | Advanced healthcare materials. | 28699308 | 2017 Sep; |
| An Adaptive Approach to Locating Mobile HIV Testing Services. | Gonsalves, Gregg S; Crawford, Forrest W; Cleary, Paul D; Kaplan, Edward H; Paltiel, A David | Medical decision making : an international journal of the Society for Medical Decision Making. | 28699382 | 2017 Jul 01; |
| * Glioblastoma Exosomes for Therapeutic Angiogenesis in Peripheral Ischemia. | Monteforte, Anthony; Lam, Brian; Sherman, Michael B; Henderson, Kayla; Sligar, Andrew D; Spencer, Adrianne; Tang, Brian; Dunn, Andrew K; Baker, Aaron B | Tissue engineering. Part A. | 28699397 | 2017 11; |
| Simultaneous measurements of lymphatic vessel contraction, flow and valve dynamics in multiple lymphangions using optical coherence tomography. | Blatter, Cedric; Meijer, Eelco F J; Padera, Timothy P; Vakoc, Benjamin J | Journal of biophotonics. | 28700145 | 2017 Jul 12; |
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| Spatiotemporal presentation of exogenous SDF-1 with PLGA nanoparticles modulates SDF-1/CXCR4 signaling axis in the rodent cortex. | Dutta, D; Hickey, K; Salifu, M; Fauer, C; Willingham, C; Stabenfeldt, S E | Biomaterials science. | 28703822 | 2017 Jul 25; |
| Rapid and Programmable Protein Mutagenesis Using Plasmid Recombineering. | Higgins, Sean A; Ouonkap, Sorel V Y; Savage, David F | ACS synthetic biology. | 28707884 | 2017 Jul 24; |
| Targeted Annotation of S-Sulfonylated Peptides by Selective Infrared Multiphoton Dissociation Mass Spectrometry. | Borotto, Nicholas B; McClory, Phillip J; Martin, Brent R; Håkansson, Kristina | Analytical chemistry. | 28708386 | 2017 Aug 15; |
| Targeting weight loss interventions to reduce cardiovascular complications of type 2 diabetes: a machine learning-based post-hoc analysis of heterogeneous treatment effects in the Look AHEAD trial. | Baum, Aaron; Scarpa, Joseph; Bruzelius, Emilie; Tamler, Ronald; Basu, Sanjay; Faghmous, James | The lancet. Diabetes & endocrinology. | 28711469 | 2017 Oct; |
| Computational Analysis of Lifespan Experiment Reproducibility. | Petrascheck, Michael; Miller, Dana L | Frontiers in genetics. | 28713422 | 2017; |
| An erythroid-specific ATP2B4 enhancer mediates red blood cell hydration and malaria susceptibility. | Lessard, Samuel; Gatof, Emily Stern; Beaudoin, Mélissa; Schupp, Patrick G; Sher, Falak; Ali, Adnan; Prehar, Sukhpal; Kurita, Ryo; Nakamura, Yukio; Baena, Esther; Ledoux, Jonathan; Oceandy, Delvac; Bauer, Daniel E; Lettre, Guillaume | The Journal of clinical investigation. | 28714864 | 2017 Aug 01; |
| Poor Prognosis Indicated by Venous Circulating Tumor Cell Clusters in Early-Stage Lung Cancers. | Murlidhar, Vasudha; Reddy, Rishindra M; Fouladdel, Shamileh; Zhao, Lili; Ishikawa, Martin K; Grabauskiene, Svetlana; Zhang, Zhuo; Lin, Jules; Chang, Andrew C; Carrott, Philip; Lynch, William R; Orringer, Mark B; Kumar-Sinha, Chandan; Palanisamy, Nallasiva | Cancer research. | 28716896 | 2017 09 15; |
| CNS Anticancer Drug Discovery and Development: 2016 conference insights. | Levin, Victor A; Abrey, Lauren E; Heffron, Timothy P; Tonge, Peter J; Dar, Arvin C; Weiss, William A; Gallo, James M | CNS oncology. | 28718326 | 2017 Jul 18; |
| In vitro analysis of RQC activities provides insights into the mechanism and function of CAT tailing. | Osuna, Beatriz A; Howard, Conor J; Kc, Subheksha; Frost, Adam; Weinberg, David E | eLife. | 28718767 | 2017 Jul 18; |
| In situ expansion of engineered human liver tissue in a mouse model of chronic liver disease. | Stevens, Kelly R; Scull, Margaret A; Ramanan, Vyas; Fortin, Chelsea L; Chaturvedi, Ritika R; Knouse, Kristin A; Xiao, Jing W; Fung, Canny; Mirabella, Teodelinda; Chen, Amanda X; McCue, Margaret G; Yang, Michael T; Fleming, Heather E; Chung, Kwanghun; de J | Science translational medicine. | 28724577 | ; |
| Partially exhausted tumor-infiltrating lymphocytes predict response to combination immunotherapy. | Loo, Kimberly; Tsai, Katy K; Mahuron, Kelly; Liu, Jacqueline; Pauli, Mariela L; Sandoval, Priscila M; Nosrati, Adi; Lee, James; Chen, Lawrence; Hwang, Jimmy; Levine, Lauren S; Krummel, Matthew F; Algazi, Alain P; Alvarado, Michael D; Rosenblum, Michael D; | JCI insight. | 28724802 | 2017 Jul 20; |
| Solid-state nanopore based biomimetic voltage gated ion channels. | Pevarnik, Matthew; Cui, Weibin; Yemenicioglu, Sukru; Rofeh, Justin; Theogarajan, Luke | Bioinspiration & biomimetics. | 28726670 | 2017 11 06; |
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| Optogenetic Control of Ras/Erk Signaling Using the Phy-PIF System. | Goglia, Alexander G; Wilson, Maxwell Z; DiGiorno, Daniel B; Toettcher, Jared E | Methods in molecular biology (Clifton, N.J.). | 28730469 | ; |
| Partial Least Squares Regression Models for the Analysis of Kinase Signaling. | Bourgeois, Danielle L; Kreeger, Pamela K | Methods in molecular biology (Clifton, N.J.). | 28730500 | 2017; |
| Lipophilic Polycation Vehicles Display High Plasmid DNA Delivery to Multiple Cell Types. | Wu, Yaoying; Smith, Adam E; Reineke, Theresa M | Bioconjugate chemistry. | 28731685 | ; |
| CRISPulator: a discrete simulation tool for pooled genetic screens. | Nagy, Tamas; Kampmann, Martin | BMC bioinformatics. | 28732459 | 2017 Jul 21; |
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| Behaviorally Selective Engagement of Short-Latency Effector Pathways by Motor Cortex. | Miri, Andrew; Warriner, Claire L; Seely, Jeffrey S; Elsayed, Gamaleldin F; Cunningham, John P; Churchland, Mark M; Jessell, Thomas M | Neuron. | 28735748 | 2017 Aug 02; |
| High-Content Screening in hPSC-Neural Progenitors Identifies Drug Candidates that Inhibit Zika Virus Infection in Fetal-like Organoids and Adult Brain. | Zhou, Ting; Tan, Lei; Cederquist, Gustav Y; Fan, Yujie; Hartley, Brigham J; Mukherjee, Suranjit; Tomishima, Mark; Brennand, Kristen J; Zhang, Qisheng; Schwartz, Robert E; Evans, Todd; Studer, Lorenz; Chen, Shuibing | Cell stem cell. | 28736217 | 2017 Aug 03; |
| ?-TrCP1 Is a Vacillatory Regulator of Wnt Signaling. | Long, Marcus John; Lin, Hong-Yu; Parvez, Saba; Zhao, Yi; Poganik, Jesse Richard; Huang, Paul; Aye, Yimon | Cell chemical biology. | 28736239 | 2017 Aug 17; |
| Facile assembly and loading of theranostic polymersomes via multi-impingement flash nanoprecipitation. | Allen, Sean; Osorio, Omar; Liu, Yu-Gang; Scott, Evan | Journal of controlled release : official journal of the Controlled Release Society. | 28736263 | 2017 Sep 28; |
| CD200 modulates macrophage cytokine secretion and phagocytosis in response to poly(lactic co-glycolic acid) microparticles and films. | Chen, E Y; Chu, S; Gov, L; Kim, Y K; Lodoen, M B; Tenner, A J; Liu, W F | Journal of materials chemistry. B. | 28736613 | 2017 Feb 28; |
| Multicellular Vascularized Engineered Tissues through User-Programmable Biomaterial Photodegradation. | Arakawa, Christopher K; Badeau, Barry A; Zheng, Ying; DeForest, Cole A | Advanced materials (Deerfield Beach, Fla.). | 28737278 | 2017 Oct; |
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| Combinations of isoform-targeted histone deacetylase inhibitors and bryostatin analogues display remarkable potency to activate latent HIV without global T-cell activation. | Albert, Brice J; Niu, Austin; Ramani, Rashmi; Marshall, Garland R; Wender, Paul A; Williams, Robert M; Ratner, Lee; Barnes, Alexander B; Kyei, George B | Scientific reports. | 28785069 | 2017 Aug 07; |
| m(6)A mRNA methylation controls T cell homeostasis by targeting the IL-7/STAT5/SOCS pathways. | Li, Hua-Bing; Tong, Jiyu; Zhu, Shu; Batista, Pedro J; Duffy, Erin E; Zhao, Jun; Bailis, Will; Cao, Guangchao; Kroehling, Lina; Chen, Yuanyuan; Wang, Geng; Broughton, James P; Chen, Y Grace; Kluger, Yuval; Simon, Matthew D; Chang, Howard Y; Yin, Zhinan; Fl | Nature. | 28792938 | 2017 Aug 17; |
| An Engineered Optogenetic Switch for Spatiotemporal Control of Gene Expression, Cell Differentiation, and Tissue Morphogenesis. | Polstein, Lauren R; Juhas, Mark; Hanna, Gabi; Bursac, Nenad; Gersbach, Charles A | ACS synthetic biology. | 28793186 | 2017 Nov 17; |
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| Draft Genome Sequences of Three ?-Lactam-Catabolizing Soil Proteobacteria. | Crofts, Terence S; Wang, Bin; Spivak, Aaron; Gianoulis, Tara A; Forsberg, Kevin J; Gibson, Molly K; Johnsky, Lauren A; Broomall, Stacey M; Rosenzweig, C Nicole; Skowronski, Evan W; Gibbons, Henry S; Sommer, Morten O A; Dantas, Gautam | Genome announcements. | 28798166 | 2017 Aug 10; |
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| Increased Expression of Plasma-Induced ABCC1 mRNA in Cystic Fibrosis. | Ideozu, Justin E; Zhang, Xi; Pan, Amy; Ashrafi, Zainub; Woods, Katherine J; Hessner, Martin J; Simpson, Pippa; Levy, Hara | International journal of molecular sciences. | 28800122 | 2017 Aug 11; |
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| orco Mutagenesis Causes Loss of Antennal Lobe Glomeruli and Impaired Social Behavior in Ants. | Trible, Waring; Olivos-Cisneros, Leonora; McKenzie, Sean K; Saragosti, Jonathan; Chang, Ni-Chen; Matthews, Benjamin J; Oxley, Peter R; Kronauer, Daniel J C | Cell. | 28802042 | 2017 Aug 10; |
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| HIV Testing and awareness of HIV status among people who inject drugs in greater Kuala Lumpur, Malaysia. | Bazazi, Alexander R; Vijay, Aishwarya; Crawford, Forrest W; Heimer, Robert; Kamarulzaman, Adeeba; Altice, Frederick L | AIDS care. | 28803503 | 2017 Aug 13; |
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| Specialized odorant receptors in social insects that detect cuticular hydrocarbon cues and candidate pheromones. | Pask, Gregory M; Slone, Jesse D; Millar, Jocelyn G; Das, Prithwiraj; Moreira, Jardel A; Zhou, Xiaofan; Bello, Jan; Berger, Shelley L; Bonasio, Roberto; Desplan, Claude; Reinberg, Danny; Liebig, Jürgen; Zwiebel, Laurence J; Ray, Anandasankar | Nature communications. | 28819196 | 2017 Aug 17; |
| Separable Bilayer Microfiltration Device for Label-Free Enrichment of Viable Circulating Tumor Cells. | Hao, Sijie; Nisic, Merisa; He, Hongzhang; Tai, Yu-Chong; Zheng, Si-Yang | Methods in molecular biology (Clifton, N.J.). | 28819842 | 2017; |
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| Neighborhood Disadvantage is Associated with High Cytomegalovirus Seroprevalence in Pregnancy. | Lantos, Paul M; Hoffman, Kate; Permar, Sallie R; Jackson, Pearce; Hughes, Brenna L; Kind, Amy; Swamy, Geeta | Journal of racial and ethnic health disparities. | 28840519 | 2017 Aug 24; |
| TiO2 Nanoparticle-Induced Oxidation of the Plasma Membrane: Importance of the Protein Corona. | Runa, Sabiha; Lakadamyali, Melike; Kemp, Melissa L; Payne, Christine K | The journal of physical chemistry. B. | 28844138 | 2017 09 21; |
| Cancer-Specific Retargeting of BAF Complexes by a Prion-like Domain. | Boulay, Gaylor; Sandoval, Gabriel J; Riggi, Nicolo; Iyer, Sowmya; Buisson, Rémi; Naigles, Beverly; Awad, Mary E; Rengarajan, Shruthi; Volorio, Angela; McBride, Matthew J; Broye, Liliane C; Zou, Lee; Stamenkovic, Ivan; Kadoch, Cigall; Rivera, Miguel N | Cell. | 28844694 | 2017 Sep 21; |
| A Carbon Nanotube Reporter of miRNA Hybridization Events In Vivo. | Harvey, Jackson D; Jena, Prakrit V; Baker, Hanan A; Zerze, Gül H; Williams, Ryan M; Galassi, Thomas V; Roxbury, Daniel; Mittal, Jeetain; Heller, Daniel A | Nature biomedical engineering. | 28845337 | 2017; |
| Proteasome activity regulates CD8+ T lymphocyte metabolism and fate specification. | Widjaja, Christella E; Olvera, Jocelyn G; Metz, Patrick J; Phan, Anthony T; Savas, Jeffrey N; de Bruin, Gerjan; Leestemaker, Yves; Berkers, Celia R; de Jong, Annemieke; Florea, Bogdan I; Fisch, Kathleen; Lopez, Justine; Kim, Stephanie H; Garcia, Daniel A; Searles, Stephen; Bui, Jack D; Chang, Aaron N; Yates 3rd, John R; Goldrath, Ananda W; Overkleeft, Hermen S; Ovaa, Huib; Chang, John T | The Journal of clinical investigation. | 28846070 | 2017 Oct 02; |
| Super-resolution microscopy reveals that disruption of ciliary transition-zone architecture causes Joubert syndrome. | Shi, Xiaoyu; Garcia 3rd, Galo; Van De Weghe, Julie C; McGorty, Ryan; Pazour, Gregory J; Doherty, Dan; Huang, Bo; Reiter, Jeremy F | Nature cell biology. | 28846093 | 2017 Oct; |
| Structure and Functional Analysis of ClbQ, an Unusual Intermediate-Releasing Thioesterase from the Colibactin Biosynthetic Pathway. | Guntaka, Naga Sandhya; Healy, Alan R; Crawford, Jason M; Herzon, Seth B; Bruner, Steven D | ACS chemical biology. | 28846367 | 2017 Sep 08; |
| Oncolytic Reactivation of KSHV as a Therapeutic Approach for Primary Effusion Lymphoma. | Zhou, Feng; Shimoda, Michiko; Olney, Laura; Lyu, Yuanzhi; Tran, Khiem; Jiang, Guochun; Nakano, Kazushi; Davis, Ryan R; Tepper, Clifford G; Maverakis, Emanual; Campbell, Mel; Li, Yuanpei; Dandekar, Satya; Izumiya, Yoshihiro | Molecular cancer therapeutics. | 28847988 | 2017 Nov; |
| Dopaminergic dysfunction in neurodevelopmental disorders: recent advances and synergistic technologies to aid basic research. | Robinson, J Elliott; Gradinaru, Viviana | Current opinion in neurobiology. | 28850815 | 2017 Aug 26; |
| Quantifying behavior to solve sensorimotor transformations: advances from worms and flies. | Calhoun, Adam J; Murthy, Mala | Current opinion in neurobiology. | 28850885 | 2017 Oct; |
| Experimental and statistical reevaluation provides no evidence for Drosophila courtship song rhythms. | Stern, David L; Clemens, Jan; Coen, Philip; Calhoun, Adam J; Hogenesch, John B; Arthur, Ben J; Murthy, Mala | Proceedings of the National Academy of Sciences of the United States of America. | 28851830 | 2017 Sep 12; |
| Improved split fluorescent proteins for endogenous protein labeling. | Feng, Siyu; Sekine, Sayaka; Pessino, Veronica; Li, Han; Leonetti, Manuel D; Huang, Bo | Nature communications. | 28851864 | 2017 08 29; |
| The Yeast Genomes in Three Dimensions: Mechanisms and Functions. | Noma, Ken-Ichi | Annual review of genetics. | 28853923 | 2017 11 27; |
| Sex differences in sensitivity to prenatal and early childhood manganese exposure on neuromotor function in adolescents. | Chiu, Yueh-Hsiu Mathilda; Claus Henn, Birgit; Hsu, Hsiao-Hsien Leon; Pendo, Mathew P; Coull, Brent A; Austin, Christine; Cagna, Giuseppa; Fedrighi, Chiara; Placidi, Donatella; Smith, Donald R; Wright, Robert O; Lucchini, Roberto G; Arora, Manish | Environmental research. | 28858760 | 2017 Nov; |
| Bacterial flagellin-a potent immunomodulatory agent. | Hajam, Irshad A; Dar, Pervaiz A; Shahnawaz, Imam; Jaume, Juan Carlos; Lee, John Hwa | Experimental & molecular medicine. | 28860663 | ; |
| Single-Nanowire Strain Sensors Fabricated by Nanoskiving. | Jibril, Liban; Ramírez, Julián; Zaretski, Aliaksandr V; Lipomi, Darren J | Sensors and actuators. A, Physical. | 28860679 | 2017 Aug 15; |
| Though Much Is Taken, Much Abides: Finding New Antibiotics Using Old Ones. | Rosen, Paul C; Seyedsayamdost, Mohammad R | Biochemistry. | 28862834 | 2017 Sep 19; |
| Revised consensus statement on the preventive and symptomatic care of patients with leukodystrophies. | Adang, Laura A; Sherbini, Omar; Ball, Laura; Bloom, Miriam; Darbari, Anil; Amartino, Hernan; DiVito, Donna; Eichler, Florian; Escolar, Maria; Evans, Sarah H; Fatemi, Ali; Fraser, Jamie; Hollowell, Leslie; Jaffe, Nicole; Joseph, Christopher; Karpinski, Mary; Keller, Stephanie; Maddock, Ryan; Mancilla, Edna; McClary, Bruce; Mertz, Jana; Morgart, Kiley; Langan, Thomas; Leventer, Richard; Parikh, Sumit; Pizzino, Amy; Prange, Erin; Renaud, Deborah L; Rizzo, William; Shapiro, Jay; Suhr, Dean; Suhr, Teryn; Tonduti, Davide; Waggoner, Jacque; Waldman, Amy; Wolf, Nicole I; Zerem, Ayelet; Bonkowsky, Joshua L; Bernard, Genevieve; van Haren, Keith; Vanderver, Adeline; Global Leukodystrophy Initiative (GLIA) Consortium | Molecular genetics and metabolism. | 28863857 | 2017 09; |
| Estimating the Size of a Large Network and its Communities from a Random Sample. | Chen, Lin; Karbasi, Amin; Crawford, Forrest W | Advances in neural information processing systems. | 28867924 | 2016; |
| BayFish: Bayesian inference of transcription dynamics from population snapshots of single-molecule RNA FISH in single cells. | Gómez-Schiavon, Mariana; Chen, Liang-Fu; West, Anne E; Buchler, Nicolas E | Genome biology. | 28870226 | 2017 Sep 04; |
| miR-146a modulates autoreactive Th17 cell differentiation and regulates organ-specific autoimmunity. | Li, Bo; Wang, Xi; Choi, In Young; Wang, Yu-Chen; Liu, Siyuan; Pham, Alexander T; Moon, Heesung; Smith, Drake J; Rao, Dinesh S; Boldin, Mark P; Yang, Lili | The Journal of clinical investigation. | 28872459 | 2017 Oct 02; |
| Extracellular SalB contributes to intrinsic cephalosporin resistance and cell envelope integrity in Enterococcus faecalis. | Djori?, Du?anka; Kristich, Christopher J | Journal of bacteriology. | 28874409 | 2017 Sep 05; |
| Identifying DNase I hypersensitive sites as driver distal regulatory elements in breast cancer. | D Antonio, Matteo; Weghorn, Donate; D Antonio-Chronowska, Agnieszka; Coulet, Florence; Olson, Katrina M; DeBoever, Christopher; Drees, Frauke; Arias, Angelo; Alakus, Hakan; Richardson, Andrea L; Schwab, Richard B; Farley, Emma K; Sunyaev, Shamil R; Frazer | Nature communications | 28874753 | 2017 09 05 |
| Applications of vibrational tags in biological imaging by Raman microscopy. | Zhao, Zhilun; Shen, Yihui; Hu, Fanghao; Min, Wei | The Analyst. | 28875184 | 2017 Oct 23; |
| Prevention of breast cancer skeletal metastases with parathyroid hormone. | Swami, Srilatha; Johnson, Joshua; Bettinson, Lance A; Kimura, Takaharu; Zhu, Hui; Albertelli, Megan A; Johnson, Rachelle W; Wu, Joy Y | JCI insight. | 28878134 | 2017 Sep 07; |
| CF airway smooth muscle transcriptome reveals a role for PYK2. | Cook, Daniel P; Adam, Ryan J; Zarei, Keyan; Deonovic, Benjamin; Stroik, Mallory R; Gansemer, Nicholas D; Meyerholz, David K; Au, Kin Fai; Stoltz, David A | JCI insight. | 28878137 | 2017 Sep 07; |
| FOXF1 transcription factor promotes lung regeneration after partial pneumonectomy. | Bolte, Craig; Flood, Hannah M; Ren, Xiaomeng; Jagannathan, Sajjeev; Barski, Artem; Kalin, Tanya V; Kalinichenko, Vladimir V | Scientific reports. | 28878348 | 2017 Sep 06; |
| Photoacoustic Imaging for Noninvasive Periodontal Probing Depth Measurements. | Lin, C Y; Chen, F; Hariri, A; Chen, C J; Wilder-Smith, P; Takesh, T; Jokerst, J V | Journal of dental research. | 28880116 | 2017 Sep 01; |
| Denoising genome-wide histone ChIP-seq with convolutional neural networks. | Koh, Pang Wei; Pierson, Emma; Kundaje, Anshul | Bioinformatics (Oxford, England). | 28881977 | 2017 Jul 15; |
| An Optimized and Validated Method for Isolation and Characterization of Lymphocytes from HIV+ Human Gut Biopsies. | Trapecar, Martin; Khan, Shahzada; Roan, Nadia; Chen, Tsui-Hua; Telwatte, Sushama; Deswal, Monika; Pao, Montha; Somsouk, Ma; Deeks, Steven G; Hunt, Peter W; Yukl, Steven; Sanjabi, Shomyseh | AIDS research and human retroviruses. | 28882052 | 2017 Sep 07; |
| Differentiating Immune Cell Targets in Gut-Associated Lymphoid Tissue for HIV Cure. | Khan, Shahzada; Telwatte, Sushama; Trapecar, Martin; Yukl, Steven; Sanjabi, Shomyseh | AIDS research and human retroviruses. | 28882067 | 2017 Sep 07; |
| A New Nucleoside Antibiotic Chokes Bacterial RNA Polymerase. | Trautman, Eric P; Crawford, Jason M | Biochemistry. | 28885002 | 2017 09 19; |
| Kinesin superfamily protein Kif26b links Wnt5a-Ror signaling to the control of cell and tissue behaviors in vertebrates. | Susman, Michael W; Karuna, Edith P; Kunz, Ryan C; Gujral, Taranjit S; Cantú, Andrea V; Choi, Shannon S; Jong, Brigette Y; Okada, Kyoko; Scales, Michael K; Hum, Jennie; Hu, Linda S; Kirschner, Marc W; Nishinakamura, Ryuichi; Yamada, Soichiro; Laird, Diana J; Jao, Li-En; Gygi, Steven P; Greenberg, Michael E; Ho, Hsin-Yi Henry | eLife. | 28885975 | 2017 Sep 08; |
| MicroRNAs Induce a Permissive Chromatin Environment that Enables Neuronal Subtype-Specific Reprogramming of Adult Human Fibroblasts. | Abernathy, Daniel G; Kim, Woo Kyung; McCoy, Matthew J; Lake, Allison M; Ouwenga, Rebecca; Lee, Seong Won; Xing, Xiaoyun; Li, Daofeng; Lee, Hyung Joo; Heuckeroth, Robert O; Dougherty, Joseph D; Wang, Ting; Yoo, Andrew S | Cell stem cell. | 28886366 | 2017 Sep 07; |
| Burden of higher lead exposure in African-Americans starts in utero and persists into childhood. | Cassidy-Bushrow, Andrea E; Sitarik, Alexandra R; Havstad, Suzanne; Park, Sung Kyun; Bielak, Lawrence F; Austin, Christine; Johnson, Christine Cole; Arora, Manish | Environment international. | 28886415 | 2017 Nov; |
| Genome Engineering for Personalized Arthritis Therapeutics. | Adkar, Shaunak S; Brunger, Jonathan M; Willard, Vincent P; Wu, Chia-Lung; Gersbach, Charles A; Guilak, Farshid | Trends in molecular medicine. | 28887050 | 2017 Oct; |
| Using Virtual Reality Simulation Environments to Assess Competence for Emergency Medicine Learners. | McGrath, Jillian L; Taekman, Jeffrey M; Dev, Parvati; Danforth, Douglas R; Mohan, Deepika; Kman, Nicholas; Crichlow, Amanda; Bond, William F | Academic emergency medicine : official journal of the Society for Academic Emergency Medicine. | 28888070 | 2018 02; |
| Rhesus monkeys for a nonhuman primate model of cytomegalovirus infections. | Itell, Hannah L; Kaur, Amitinder; Deere, Jesse D; Barry, Peter A; Permar, Sallie R | Current opinion in virology. | 28888133 | 2017 Aug; |
| Instrumentation for cryogenic magic angle spinning dynamic nuclear polarization using 90L of liquid nitrogen per day. | Albert, Brice J; Pahng, Seong Ho; Alaniva, Nicholas; Sesti, Erika L; Rand, Peter W; Saliba, Edward P; Scott, Faith J; Choi, Eric J; Barnes, Alexander B | Journal of magnetic resonance (San Diego, Calif. : 1997). | 28888182 | 2017 Sep 01; |
| Live Flow Cytometry Analysis of c-di-GMP Levels in Single Cell Populations. | Yeo, Jongchan; Wang, Xin C; Hammond, Ming C | Methods in molecular biology (Clifton, N.J.). | 28889290 | 2017; |
| Static and Dynamic DNA Loops form AP-1-Bound Activation Hubs during Macrophage Development. | Phanstiel, Douglas H; Van Bortle, Kevin; Spacek, Damek; Hess, Gaelen T; Shamim, Muhammad Saad; Machol, Ido; Love, Michael I; Aiden, Erez Lieberman; Bassik, Michael C; Snyder, Michael P | Molecular cell. | 28890333 | 2017 Sep 21; |
| High potential but limited evidence: Using voice data from smartphones to monitor and diagnose mood disorders. | Or, Flora; Torous, John; Onnela, Jukka-Pekka | Psychiatric rehabilitation journal. | 28891659 | 2017 09; |
| Omega-3 fatty acids correlate with gut microbiome diversity and production of N-carbamylglutamate in middle aged and elderly women. | Menni, Cristina; Zierer, Jonas; Pallister, Tess; Jackson, Matthew A; Long, Tao; Mohney, Robert P; Steves, Claire J; Spector, Tim D; Valdes, Ana M | Scientific reports. | 28894110 | 2017 Sep 11; |
| Whole exome sequencing reveals a functional mutation in the GAIN domain of the Bai2 receptor underlying a forward mutagenesis hyperactivity QTL. | Speca, David J; Trimmer, James S; Peterson, Andrew S; Díaz, Elva | Mammalian genome : official journal of the International Mammalian Genome Society. | 28894906 | ; |
| A Carbon Nanotube Optical Reporter Maps Endolysosomal Lipid Flux. | Jena, Prakrit V; Roxbury, Daniel; Galassi, Thomas V; Akkari, Leila; Horoszko, Christopher P; Iaea, David B; Budhathoki-Uprety, Januka; Pipalia, Nina; Haka, Abigail S; Harvey, Jackson D; Mittal, Jeetain; Maxfield, Frederick R; Joyce, Johanna A; Heller, Daniel A | ACS nano. | 28898055 | 2017 Nov 28; |
| A unified approach to targeting the lysosome's degradative and growth signaling roles. | Rebecca, Vito W; Nicastri, Michael C; McLaughlin, Noel; Fennelly, Colin; McAfee, Quentin; Ronghe, Amruta; Nofal, Michel; Lim, Chun-Yan; Witze, Eric; Chude, Cynthia I; Zhang, Gao; Alicea, Gretchen M; Piao, Shengfu; Murugan, Sengottuvelan; Ojha, Rani; Levi, | Cancer discovery. | 28899863 | 2017 Sep 12; |
| Early Detection of Molecular Residual Disease in Localized Lung Cancer by Circulating Tumor DNA Profiling. | Chaudhuri, Aadel A; Chabon, Jacob J; Lovejoy, Alexander F; Newman, Aaron M; Stehr, Henning; Azad, Tej D; Khodadoust, Michael S; Esfahani, Mohammad Shahrokh; Liu, Chih Long; Zhou, Li; Scherer, Florian; Kurtz, David M; Say, Carmen; Carter, Justin N; Merriot | Cancer discovery. | 28899864 | 2017 12; |
| Targeting CXCR4-dependent immunosuppressive Ly6Clow monocytes improves antiangiogenic therapy in colorectal cancer. | Jung, Keehoon; Heishi, Takahiro; Incio, Joao; Huang, Yuhui; Beech, Elizabeth Y; Pinter, Matthias; Ho, William W; Kawaguchi, Kosuke; Rahbari, Nuh N; Chung, Euiheon; Kim, Jun Ki; Clark, Jeffrey W; Willett, Christopher G; Yun, Seok Hyun; Luster, Andrew D; Padera, Timothy P; Jain, Rakesh K; Fukumura, Dai | Proceedings of the National Academy of Sciences of the United States of America. | 28900008 | 2017 09 26; |
| Anti-A? single-chain variable fragment antibodies restore memory acquisition in a Drosophila model of Alzheimer's disease. | Martin-Peña, Alfonso; Rincon-Limas, Diego E; Fernandez-Funez, Pedro | Scientific reports. | 28900185 | 2017 Sep 12; |
| The neuropeptide NMU amplifies ILC2-driven allergic lung inflammation. | Wallrapp, Antonia; Riesenfeld, Samantha J; Burkett, Patrick R; Abdulnour, Raja-Elie E; Nyman, Jackson; Dionne, Danielle; Hofree, Matan; Cuoco, Michael S; Rodman, Christopher; Farouq, Daneyal; Haas, Brian J; Tickle, Timothy L; Trombetta, John J; Baral, Pan | Nature. | 28902842 | 2017 09 21; |
| Evolution of polymer formation within the actin superfamily. | Stoddard, Patrick R; Williams, Tom A; Garner, Ethan; Baum, Buzz | Molecular biology of the cell. | 28904122 | 2017 Sep 15; |
| Transcription of a 5' extended mRNA isoform directs dynamic chromatin changes and interference of a downstream promoter. | Chia, Minghao; Tresenrider, Amy; Chen, Jingxun; Spedale, Gianpiero; Jorgensen, Victoria; Ünal, Elçin; van Werven, Folkert Jacobus | eLife. | 28906248 | 2017 09 14; |
| Kinetochore inactivation by expression of a repressive mRNA. | Chen, Jingxun; Tresenrider, Amy; Chia, Minghao; McSwiggen, David T; Spedale, Gianpiero; Jorgensen, Victoria; Liao, Hanna; van Werven, Folkert Jacobus; Ünal, Elçin | eLife. | 28906249 | 2017 09 14; |
| The Landscape of Type VI Secretion across Human Gut Microbiomes Reveals Its Role in Community Composition. | Verster, Adrian J; Ross, Benjamin D; Radey, Matthew C; Bao, Yiqiao; Goodman, Andrew L; Mougous, Joseph D; Borenstein, Elhanan | Cell host & microbe. | 28910638 | 2017 Sep 13; |
| A systematic comparison of error correction enzymes by next-generation sequencing. | Lubock, Nathan B; Zhang, Di; Sidore, Angus M; Church, George M; Kosuri, Sriram | Nucleic acids research. | 28911123 | 2017 Sep 06; |
| A zebrafish model of X-linked adrenoleukodystrophy recapitulates key disease features and demonstrates a developmental requirement for abcd1 in oligodendrocyte patterning and myelination. | Strachan, Lauren R; Stevenson, Tamara J; Freshner, Briana; Keefe, Matthew D; Miranda Bowles, D; Bonkowsky, Joshua L | Human molecular genetics. | 28911205 | 2017 09 15; |
| Understanding CRY2 interactions for optical control of intracellular signaling. | Duan, Liting; Hope, Jen; Ong, Qunxiang; Lou, Hsin-Ya; Kim, Namdoo; McCarthy, Comfrey; Acero, Victor; Lin, Michael Z; Cui, Bianxiao | Nature communications. | 28916751 | 2017 09 15; |
| Polymorphisms in manganese transporters show developmental stage and sex specific associations with manganese concentrations in primary teeth. | Wahlberg, Karin; Arora, Manish; Curtin, Austen; Curtin, Paul; Wright, Robert O; Smith, Donald R; Lucchini, Roberto G; Broberg, Karin; Austin, Christine | Neurotoxicology. | 28917719 | 2018 01; |
| Acute CD47 Blockade During Ischemic Myocardial Reperfusion Enhances Phagocytosis-Associated Cardiac Repair. | Zhang, Shuang; Yeap, Xin-Yi; DeBerge, Matthew; Naresh, Nivedita K; Wang, Kevin; Jiang, Zhengxin; Wilcox, Jane E; White, Steven M; Morrow, John P; Burridge, Paul W; Procissi, Daniel; Scott, Evan A; Frazier, William; Thorp, Edward B | JACC. Basic to translational science. | 28920097 | 2017 Aug; |
| Computationally Efficient Algorithms for Sparse, Dynamic Solutions to the EEG Source Localization Problem. | Pirondini, Elvira; Babadi, Behtash; Obregon-Henao, Gabriel; Lamus, Camilo; Malik, Wasim Q; Hamalainen, Matti S; Purdon, Patrick L | IEEE transactions on bio-medical engineering. | 28920892 | 2018 06; |
| Failure of the azithromycin and ethambutol combination regimen in the hollow-fibre system model of pulmonary Mycobacterium avium infection is due to acquired resistance. | Srivastava, Shashikant; Deshpande, Devyani; Gumbo, Tawanda | The Journal of antimicrobial chemotherapy. | 28922805 | 2017 Sep 01; |
| Prevention of C5aR1 signaling delays microglial inflammatory polarization, favors clearance pathways and suppresses cognitive loss. | Hernandez, Michael X; Jiang, Shan; Cole, Tracy A; Chu, Shu-Hui; Fonseca, Maria I; Fang, Melody J; Hohsfield, Lindsay A; Torres, Maria D; Green, Kim N; Wetsel, Rick A; Mortazavi, Ali; Tenner, Andrea J | Molecular neurodegeneration. | 28923083 | 2017 Sep 18; |
| Contralateral bias of high spatial frequency tuning and cardinal direction selectivity in mouse visual cortex. | Salinas, Kirstie J; Figueroa Velez, Dario X; Zeitoun, Jack H; Kim, Hyungtae; Gandhi, Sunil P | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 28924011 | 2017 Sep 18; |
| Polycomb directs timely activation of germline genes in spermatogenesis. | Maezawa, So; Hasegawa, Kazuteru; Yukawa, Masashi; Sakashita, Akihiko; Alavattam, Kris G; Andreassen, Paul R; Vidal, Miguel; Koseki, Haruhiko; Barski, Artem; Namekawa, Satoshi H | Genes & development. | 28924034 | 2017 08 15; |
| Quantitative SERS by hot spot normalization - surface enhanced Rayleigh band intensity as an alternative evaluation parameter for SERS substrate performance. | Wei, Haoran; McCarthy, Alexis; Song, Junyeob; Zhou, Wei; Vikesland, Peter J | Faraday discussions. | 28926064 | 2017 Sep 19; |
| Experience-dependent neural plasticity, learning, and memory in the era of epitranscriptomics. | Leighton, L J; Ke, K; Zajaczkowski, E L; Edmunds, J; Spitale, R C; Bredy, T W | Genes, brain, and behavior. | 28926184 | 2018 Mar; |
| Strategies and Challenges in Identifying Function for Thousands of sORF-Encoded Peptides in Meiosis. | Hollerer, Ina; Higdon, Andrea; Brar, Gloria A | Proteomics. | 28929627 | 2018 May; |
| Group 1 Innate Lymphoid Cell Lineage Identity Is Determined by a cis-Regulatory Element Marked by a Long Non-coding RNA. | Mowel, Walter K; McCright, Sam J; Kotzin, Jonathan J; Collet, Magalie A; Uyar, Asli; Chen, Xin; DeLaney, Alexandra; Spencer, Sean P; Virtue, Anthony T; Yang, EnJun; Villarino, Alejandro; Kurachi, Makoto; Dunagin, Margaret C; Pritchard, Gretchen Harms; Stein, Judith; Hughes, Cynthia; Fonseca-Pereira, Diogo; Veiga-Fernandes, Henrique; Raj, Arjun; Kambayashi, Taku; Brodsky, Igor E; O'Shea, John J; Wherry, E John; Goff, Loyal A; Rinn, John L; Williams, Adam; Flavell, Richard A; Henao-Mejia, Jorge | Immunity. | 28930659 | 2017 Sep 19; |
| Single-cell analyses to tailor treatments. | Shalek, Alex K; Benson, Mikael | Science translational medicine. | 28931656 | 2017 Sep 20; |
| Essential role of Kir5.1 channels in renal salt handling and blood pressure control. | Palygin, Oleg; Levchenko, Vladislav; Ilatovskaya, Daria V; Pavlov, Tengis S; Pochynyuk, Oleh M; Jacob, Howard J; Geurts, Aron M; Hodges, Matthew R; Staruschenko, Alexander | JCI insight. | 28931751 | 2017 Sep 21; |
| Inflammation, oxidative stress, and glial cell activation characterize stellate ganglia from humans with electrical storm. | Ajijola, Olujimi A; Hoover, Donald B; Simerly, Thomas M; Brown, T Christopher; Yanagawa, Jane; Biniwale, Reshma M; Lee, Jay M; Sadeghi, Ali; Khanlou, Negar; Ardell, Jeffrey L; Shivkumar, Kalyanam | JCI insight. | 28931760 | 2017 Sep 21; |
| Linking Network Activity to Synaptic Plasticity during Sleep: Hypotheses and Recent Data. | Puentes-Mestril, Carlos; Aton, Sara J | Frontiers in neural circuits. | 28932187 | 2017; |
| Rational Design of Selective Adenine-Based Scaffolds for Inactivation of Bacterial Histidine Kinases. | Goswami, Manibarsha; Wilke, Kaelyn E; Carlson, Erin E | Journal of medicinal chemistry. | 28933546 | 2017 Oct 12; |
| Structural inhibition of dynamin-mediated membrane fission by endophilin. | Hohendahl, Annika; Talledge, Nathaniel; Galli, Valentina; Shen, Peter S; Humbert, Frédéric; De Camilli, Pietro; Frost, Adam; Roux, Aurélien | eLife. | 28933693 | 2017 Sep 21; |
| Ten simple rules for developing a mentor-mentee expectations document. | Masters, Kristyn S; Kreeger, Pamela K | PLoS computational biology. | 28934208 | 2017 Sep; |
| Liquid phase condensation in cell physiology and disease. | Shin, Yongdae; Brangwynne, Clifford P | Science (New York, N.Y.). | 28935776 | 2017 09 22; |
| Programmable Microfluidic Synthesis of Over One Thousand Uniquely Identifiable Spectral Codes. | Nguyen, H Q; Baxter, B C; Brower, K; Diaz-Botia, C A; DeRisi, J L; Fordyce, P M; Thorn, K S | Advanced optical materials. | 28936383 | 2017 Feb 02; |
| Surface Coating of Nanoparticles Reduces Background Inflammatory Activity while Increasing Particle Uptake and Delivery. | Moser, Brittany A; Steinhardt, Rachel C; Esser-Kahn, Aaron P | ACS biomaterials science & engineering. | 28936479 | 2017 Feb 13; |
| Dynamic Looping Interactions: Setting the 3D Stage for the Macrophage. | Rege, Mayuri; Phillips-Cremins, Jennifer E | Molecular cell. | 28938095 | 2017 Sep 21; |
| A Spatial Interactome Reveals the Protein Organization of the Algal CO2-Concentrating Mechanism. | Mackinder, Luke C M; Chen, Chris; Leib, Ryan D; Patena, Weronika; Blum, Sean R; Rodman, Matthew; Ramundo, Silvia; Adams, Christopher M; Jonikas, Martin C | Cell. | 28938113 | 2017 Sep 21; |
| Macrophage-released ADAMTS1 promotes muscle stem cell activation. | Du, Hongqing; Shih, Chung-Hsuan; Wosczyna, Michael N; Mueller, Alisa A; Cho, Joonseok; Aggarwal, Abhishek; Rando, Thomas A; Feldman, Brian J | Nature communications. | 28939843 | 2017 09 22; |
| Multiplexed Exchange-PAINT imaging reveals ligand-dependent EGFR and Met interactions in the plasma membrane. | Werbin, Jeffrey L; Avendaño, Maier S; Becker, Verena; Jungmann, Ralf; Yin, Peng; Danuser, Gaudenz; Sorger, Peter K | Scientific reports. | 28939861 | 2017 Sep 22; |
| Neuro-immune Interactions in Inflammation and Host Defense: Implications for Transplantation. | Chavan, Sangeeta S; Ma, Pingchuan; Chiu, Isaac M | American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons. | 28941325 | 2017 Sep 23; |
| Manganese in teeth and neurobehavior: Sex-specific windows of susceptibility. | Bauer, Julia Anglen; Claus Henn, Birgit; Austin, Christine; Zoni, Silvia; Fedrighi, Chiara; Cagna, Giuseppa; Placidi, Donatella; White, Roberta F; Yang, Qiong; Coull, Brent A; Smith, Donald; Lucchini, Roberto G; Wright, Robert O; Arora, Manish | Environment international. | 28941415 | 2017 Nov; |
| High-Throughput Microfluidic Labyrinth for the Label-free Isolation of Circulating Tumor Cells. | Lin, Eric; Rivera-Báez, Lianette; Fouladdel, Shamileh; Yoon, Hyeun Joong; Guthrie, Stephanie; Wieger, Jacob; Deol, Yadwinder; Keller, Evan; Sahai, Vaibhav; Simeone, Diane M; Burness, Monika L; Azizi, Ebrahim; Wicha, Max S; Nagrath, Sunitha | Cell systems. | 28941584 | 2017 09 27; |
| Protein-loaded emulsion electrospun fibers optimized for bioactivity retention and pH-controlled release for peroral delivery of biologic therapeutics. | Frizzell, Hannah; Ohlsen, Tiffany J; Woodrow, Kim A | International journal of pharmaceutics. | 28941831 | 2017 Nov 25; |
| Age-Dependent Alterations in Meiotic Recombination Cause Chromosome Segregation Errors in Spermatocytes. | Zelazowski, Maciej J; Sandoval, Maria; Paniker, Lakshmi; Hamilton, Holly M; Han, Jiaying; Gribbell, Mikalah A; Kang, Rhea; Cole, Francesca | Cell. | 28942922 | 2017 Oct 19; |
| The Jellyfish Cassiopea Exhibits a Sleep-like State. | Nath, Ravi D; Bedbrook, Claire N; Abrams, Michael J; Basinger, Ty; Bois, Justin S; Prober, David A; Sternberg, Paul W; Gradinaru, Viviana; Goentoro, Lea | Current biology : CB. | 28943083 | 2017 Oct 09; |
| The Chd1 Chromatin Remodeler Shifts Nucleosomal DNA Bidirectionally as a Monomer. | Qiu, Yupeng; Levendosky, Robert F; Chakravarthy, Srinivas; Patel, Ashok; Bowman, Gregory D; Myong, Sua | Molecular cell. | 28943314 | 2017 Oct 05; |
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| Accelerating Early Antituberculosis Drug Discovery by Creating Mycobacterial Indicator Strains That Predict Mode of Action. | Boot, Maikel; Commandeur, Susanna; Subudhi, Amit K; Bahira, Meriem; Smith 2nd, Trever C; Abdallah, Abdallah M; van Gemert, Mae; Lelièvre, Joël; Ballell, Lluís; Aldridge, Bree B; Pain, Arnab; Speer, Alexander; Bitter, Wilbert | Antimicrobial agents and chemotherapy. | 29661879 | 2018 Jul; |
| Refinement of Spatial Receptive Fields in the Developing Mouse Lateral Geniculate Nucleus Is Coordinated with Excitatory and Inhibitory Remodeling. | Tschetter, Wayne W; Govindaiah, Gubbi; Etherington, Ian M; Guido, William; Niell, Cristopher M | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 29661964 | 2018 05 09; |
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| Noninvasive ovarian cancer biomarker detection via an optical nanosensor implant. | Williams, Ryan M; Lee, Christopher; Galassi, Thomas V; Harvey, Jackson D; Leicher, Rachel; Sirenko, Maria; Dorso, Madeline A; Shah, Janki; Olvera, Narciso; Dao, Fanny; Levine, Douglas A; Heller, Daniel A | Science advances. | 29675469 | 2018 Apr; |
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| Internal migration and transmission dynamics of tuberculosis in Shanghai, China: an epidemiological, spatial, genomic analysis. | Yang, Chongguang; Lu, Liping; Warren, Joshua L; Wu, Jie; Jiang, Qi; Zuo, Tianyu; Gan, Mingyu; Liu, Mei; Liu, Qingyun; DeRiemer, Kathryn; Hong, Jianjun; Shen, Xin; Colijn, Caroline; Guo, Xiaoqin; Gao, Qian; Cohen, Ted | The Lancet. Infectious diseases. | 29681517 | 2018 Jul; |
| Different Neuronal Activity Patterns Induce Different Gene Expression Programs. | Tyssowski, Kelsey M; DeStefino, Nicholas R; Cho, Jin-Hyung; Dunn, Carissa J; Poston, Robert G; Carty, Crista E; Jones, Richard D; Chang, Sarah M; Romeo, Palmyra; Wurzelmann, Mary K; Ward, James M; Andermann, Mark L; Saha, Ramendra N; Dudek, Serena M; Gray, Jesse M | Neuron. | 29681534 | 2018 May 02; |
| Polycomb protein SCML2 facilitates H3K27me3 to establish bivalent domains in the male germline. | Maezawa, So; Hasegawa, Kazuteru; Yukawa, Masashi; Kubo, Naoki; Sakashita, Akihiko; Alavattam, Kris G; Sin, Ho-Su; Kartashov, Andrey V; Sasaki, Hiroyuki; Barski, Artem; Namekawa, Satoshi H | Proceedings of the National Academy of Sciences of the United States of America. | 29686098 | 2018 May 08; |
| Tau Internalization is Regulated by 6-O Sulfation on Heparan Sulfate Proteoglycans (HSPGs). | Rauch, Jennifer N; Chen, John J; Sorum, Alexander W; Miller, Gregory M; Sharf, Tal; See, Stephanie K; Hsieh-Wilson, Linda C; Kampmann, Martin; Kosik, Kenneth S | Scientific reports. | 29686391 | 2018 Apr 23; |
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| Selection and Neutral Mutations Drive Pervasive Mutability Losses in Long-Lived Anti-HIV B-Cell Lineages. | Vieira, Marcos C; Zinder, Daniel; Cobey, Sarah | Molecular biology and evolution. | 29688540 | 2018 May 01; |
| 3D Printed Functional and Biological Materials on Moving Freeform Surfaces. | Zhu, Zhijie; Guo, Shuang-Zhuang; Hirdler, Tessa; Eide, Cindy; Fan, Xiaoxiao; Tolar, Jakub; McAlpine, Michael C | Advanced materials (Deerfield Beach, Fla.). | 29691902 | 2018 Jun; |
| Loss of KLHL6 promotes diffuse large B-cell lymphoma growth and survival by stabilizing the mRNA decay factor roquin2. | Choi, Jaewoo; Lee, Kyutae; Ingvarsdottir, Kristin; Bonasio, Roberto; Saraf, Anita; Florens, Laurence; Washburn, Michael P; Tadros, Saber; Green, Michael R; Busino, Luca | Nature cell biology. | 29695787 | 2018 May; |
| XMAP215 is a microtubule nucleation factor that functions synergistically with the ?-tubulin ring complex. | Thawani, Akanksha; Kadzik, Rachel S; Petry, Sabine | Nature cell biology. | 29695792 | 2018 May; |
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| Zwitterionic PEG-PC Hydrogels Modulate the Foreign Body Response in a Modulus-Dependent Manner. | Jansen, Lauren E; Amer, Luke D; Chen, Esther Y-T; Nguyen, Thuy V; Saleh, Leila S; Emrick, Todd; Liu, Wendy F; Bryant, Stephanie J; Peyton, Shelly R | Biomacromolecules. | 29698603 | 2018 07 09; |
| RNA-guided transcriptional silencing in vivo with S. aureus CRISPR-Cas9 repressors. | Thakore, Pratiksha I; Kwon, Jennifer B; Nelson, Christopher E; Rouse, Douglas C; Gemberling, Matthew P; Oliver, Matthew L; Gersbach, Charles A | Nature communications. | 29700298 | 2018 Apr 26; |
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| The Energetics and Physiological Impact of Cohesin Extrusion. | Vian, Laura; P?kowska, Aleksandra; Rao, Suhas S P; Kieffer-Kwon, Kyong-Rim; Jung, Seolkyoung; Baranello, Laura; Huang, Su-Chen; El Khattabi, Laila; Dose, Marei; Pruett, Nathanael; Sanborn, Adrian L; Canela, Andres; Maman, Yaakov; Oksanen, Anna; Resch, Wolfgang; Li, Xingwang; Lee, Byoungkoo; Kovalchuk, Alexander L; Tang, Zhonghui; Nelson, Steevenson; Di Pierro, Michele; Cheng, Ryan R; Machol, Ido; St Hilaire, Brian Glenn; Durand, Neva C; Shamim, Muhammad S; Stamenova, Elena K; Onuchic, José N; Ruan, Yijun; Nussenzweig, Andre; Levens, David; Aiden, Erez Lieberman; Casellas, Rafael | Cell. | 29706548 | 2018 May 17; |
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| Protein Cofactors Are Essential for High-Affinity DNA Binding by the Nuclear Factor ?B RelA Subunit. | Mulero, Maria Carmen; Shahabi, Shandy; Ko, Myung Soo; Schiffer, Jamie M; Huang, De-Bin; Wang, Vivien Ya-Fan; Amaro, Rommie E; Huxford, Tom; Ghosh, Gourisankar | Biochemistry. | 29708732 | 2018 05 22; |
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| The case for treatment fidelity in active music interventions: why and how. | Wiens, Natalie; Gordon, Reyna L | Annals of the New York Academy of Sciences. | 29727027 | 2018 May 04; |
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| From allergen to oral vaccine carrier: A new face of ragweed pollen. | Uddin, Md Jasim; Gill, Harvinder Singh | International journal of pharmaceutics. | 29729407 | 2018 Jul 10; |
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| Multiplex Quantification Identifies Novel Exercise-regulated Myokines/Cytokines in Plasma and in Glycolytic and Oxidative Skeletal Muscle. | Little, Hannah C; Tan, Stefanie Y; Cali, Francesca M; Rodriguez, Susana; Lei, Xia; Wolfe, Andrew; Hug, Christopher; Wong, G William | Molecular & cellular proteomics : MCP. | 29735541 | 2018 08; |
| N-hydroxy-pipecolic acid is a mobile metabolite that induces systemic disease resistance in Arabidopsis. | Chen, Yun-Chu; Holmes, Eric C; Rajniak, Jakub; Kim, Jung-Gun; Tang, Sandy; Fischer, Curt R; Mudgett, Mary Beth; Sattely, Elizabeth S | Proceedings of the National Academy of Sciences of the United States of America. | 29735713 | 2018 05 22; |
| Alternatively-Activated Macrophages Upregulate Mesothelial Expression of P-Selectin to Enhance Adhesion of Ovarian Cancer Cells. | Carroll, Molly J; Fogg, Kaitlin C; Patel, Harin A; Krause, Harris B; Mancha, Anne-Sophie; Patankar, Manish S; Weisman, Paul S; Barroilhet, Lisa; Kreeger, Pamela K | Cancer research. | 29739756 | ; |
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| Traction Force Screening Enabled by Compliant PDMS Elastomers. | Yoshie, Haruka; Koushki, Newsha; Kaviani, Rosa; Tabatabaei, Mohammad; Rajendran, Kavitha; Dang, Quynh; Husain, Amjad; Yao, Sean; Li, Chuck; Sullivan, John K; Saint-Geniez, Magali; Krishnan, Ramaswamy; Ehrlicher, Allen J | Biophysical journal. | 29742412 | ; |
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| Blocking Neuronal Signaling to Immune Cells Treats Streptococcal Invasive Infection. | Pinho-Ribeiro, Felipe A; Baddal, Buket; Haarsma, Rianne; O'Seaghdha, Maghnus; Yang, Nicole J; Blake, Kimbria J; Portley, Makayla; Verri, Waldiceu A; Dale, James B; Wessels, Michael R; Chiu, Isaac M | Cell. | 29754819 | 2018 May 17; |
| A Post-Transcriptional Feedback Mechanism for Noise Suppression and Fate Stabilization. | Hansen, Maike M K; Wen, Winnie Y; Ingerman, Elena; Razooky, Brandon S; Thompson, Cassandra E; Dar, Roy D; Chin, Charles W; Simpson, Michael L; Weinberger, Leor S | Cell. | 29754821 | 2018 Jun 14; |
| Modulation of the Cellular Uptake of DNA Origami through Control over Mass and Shape. | Bastings, Maartje M C; Anastassacos, Frances M; Ponnuswamy, Nandhini; Leifer, Franziska G; Cuneo, Garry; Lin, Chenxiang; Ingber, Donald E; Ryu, Ju Hee; Shih, William M | Nano letters | 29756442 | 2018 06 13 |
| Spatially Restricting Bioorthogonal Nucleoside Biosynthesis Enables Selective Metabolic Labeling of the Mitochondrial Transcriptome. | Nguyen, Kim; Aggarwal, Mahima B; Feng, Chao; Balderrama, Gabriela; Fazio, Michael; Mortazavi, Ali; Spitale, Robert C | ACS chemical biology. | 29756767 | 2018 Jun 15; |
| Reuse of public, genome-wide, murine eosinophil expression data for hypotheses development. | Grace, Jillian O; Malik, Astha; Reichman, Hadar; Munitz, Ariel; Barski, Artem; Fulkerson, Patricia C | Journal of leukocyte biology. | 29758095 | 2018 Jul; |
| Inducible Lung Epithelial Resistance Requires Multisource Reactive Oxygen Species Generation To Protect against Viral Infections. | Kirkpatrick, Carson T; Wang, Yongxing; Leiva Juarez, Miguel M; Shivshankar, Pooja; Pantaleón García, Jezreel; Plumer, Alexandria K; Kulkarni, Vikram V; Ware, Hayden H; Gulraiz, Fahad; Chavez Cavasos, Miguel A; Martinez Zayas, Gabriela; Wali, Shradha; Rice, Andrew P; Liu, Hongbing; Tour, James M; Sikkema, William K A; Cruz Solbes, Ana S; Youker, Keith A; Tuvim, Michael J; Dickey, Burton F; Evans, Scott E | mBio. | 29764948 | 2018 05 15; |
| The Midline Axon Crossing Decision Is Regulated through an Activity-Dependent Mechanism by the NMDA Receptor. | Gao, Jingxia; Stevenson, Tamara J; Douglass, Adam D; Barrios, Joshua P; Bonkowsky, Joshua L | eNeuro. | 29766040 | 2018 Mar-Apr; |
| Analysis of ChIP-Seq and RNA-Seq Data with BioWardrobe. | Vallabh, Sushmitha; Kartashov, Andrey V; Barski, Artem | Methods in molecular biology (Clifton, N.J.). | 29767371 | 2018; |
| Discovery of a Diazo-Forming Enzyme in Cremeomycin Biosynthesis. | Waldman, Abraham J; Balskus, Emily P | The Journal of organic chemistry. | 29771512 | 2018 07 20; |
| Progression of the Radiologic Severity Index predicts mortality in patients with parainfluenza virus-associated lower respiratory infections. | Sheshadri, Ajay; Shah, Dimpy P; Godoy, Myrna; Erasmus, Jeremy J; Song, Juhee; Li, Liang; Evans, Scott E; Chemaly, Roy F; Dickey, Burton F; Ost, David E | PloS one. | 29771962 | 2018; |
| 5C-ID: Increased resolution Chromosome-Conformation-Capture-Carbon-Copy with in situ 3C and double alternating primer design. | Kim, Ji Hun; Titus, Katelyn R; Gong, Wanfeng; Beagan, Jonathan A; Cao, Zhendong; Phillips-Cremins, Jennifer E | Methods (San Diego, Calif.). | 29772275 | ; |
| Human monocyte transcriptional profiling identifies IL-18 receptor accessory protein and lactoferrin as novel immune targets in hypertension. | Alexander, Matthew R; Norlander, Allison E; Elijovich, Fernando; Atreya, Ravi V; Gaye, Amadou; Gnecco, Juan S; Laffer, Cheryl L; Galindo, Cristi L; Madhur, Meena S | British journal of pharmacology. | 29774543 | 2018 May 18; |
| No sympathy for the hypoxic: the role of fetal oxygenation in autonomic dysfunction. | Hoang, Jonathan D; Vaseghi, Marmar | The Journal of physiology. | 29774552 | 2018 May 17; |
| Plasmodium parasite exploits host aquaporin-3 during liver stage malaria infection. | Posfai, Dora; Sylvester, Kayla; Reddy, Anupama; Ganley, Jack G; Wirth, Johannes; Cullen, Quinlan E; Dave, Tushar; Kato, Nobutaka; Dave, Sandeep S; Derbyshire, Emily R | PLoS pathogens. | 29775485 | 2018 05; |
| TAK1 mediates microenvironment-triggered autocrine signals and promotes triple-negative breast cancer lung metastasis. | Iriondo, Oihana; Liu, Yarong; Lee, Grace; Elhodaky, Mostafa; Jimenez, Christian; Li, Lin; Lang, Julie; Wang, Pin; Yu, Min | Nature communications. | 29777109 | 2018 May 18; |
| New evidence of a rhythmic priming effect that enhances grammaticality judgments in children. | Chern, Alexander; Tillmann, Barbara; Vaughan, Chloe; Gordon, Reyna L | Journal of experimental child psychology. | 29778278 | 2018 09; |
| Interrogation of Mammalian Protein Complex Structure, Function, and Membership Using Genome-Scale Fitness Screens. | Pan, Joshua; Meyers, Robin M; Michel, Brittany C; Mashtalir, Nazar; Sizemore, Ann E; Wells, Jonathan N; Cassel, Seth H; Vazquez, Francisca; Weir, Barbara A; Hahn, William C; Marsh, Joseph A; Tsherniak, Aviad; Kadoch, Cigall | Cell systems. | 29778836 | 2018 May 23; |
| Terminal Alkyne Biosynthesis in Marine Microbes. | Zhu, Xuejun; Zhang, Wenjun | Methods in enzymology. | 29779667 | 2018; |
| All-Optical Electrophysiology for High-Throughput Functional Characterization of a Human iPSC-Derived Motor Neuron Model of ALS. | Kiskinis, Evangelos; Kralj, Joel M; Zou, Peng; Weinstein, Eli N; Zhang, Hongkang; Tsioras, Konstantinos; Wiskow, Ole; Ortega, J Alberto; Eggan, Kevin; Cohen, Adam E | Stem cell reports. | 29779896 | 2018 06 05; |
| Encoding of Articulatory Kinematic Trajectories in Human Speech Sensorimotor Cortex. | Chartier, Josh; Anumanchipalli, Gopala K; Johnson, Keith; Chang, Edward F | Neuron. | 29779940 | 2018 06 06; |
| Characterizing cellular mechanical phenotypes with mechano-node-pore sensing. | Kim, Junghyun; Han, Sewoon; Lei, Andy; Miyano, Masaru; Bloom, Jessica; Srivastava, Vasudha; Stampfer, Martha M; Gartner, Zev J; LaBarge, Mark A; Sohn, Lydia L | Microsystems & nanoengineering. | 29780657 | 2018; |
| Enhanced Performance of a Molecular Photoacoustic Imaging Agent by Encapsulation in Mesoporous Silicon Nanoparticles. | Kang, Jinyoung; Kim, Dokyoung; Wang, Junxin; Han, Yunho; Zuidema, Jonathan M; Hariri, Ali; Park, Ji-Ho; Jokerst, Jesse V; Sailor, Michael J | Advanced materials (Deerfield Beach, Fla.). | 29782671 | 2018 Jul; |
| An Oil-Free Picodrop Bioassay Platform for Synthetic Biology. | Siltanen, Christian A; Cole, Russell H; Poust, Sean; Chao, Lawrence; Tyerman, Jabus; Kaufmann-Malaga, Benjamin; Ubersax, Jeff; Gartner, Zev J; Abate, Adam R | Scientific reports. | 29784937 | 2018 May 21; |
| Opto-thermoelectric nanotweezers. | Lin, Linhan; Wang, Mingsong; Peng, Xiaolei; Lissek, Emanuel N; Mao, Zhangming; Scarabelli, Leonardo; Adkins, Emily; Coskun, Sahin; Unalan, Husnu Emrah; Korgel, Brian A; Liz-Marzán, Luis M; Florin, Ernst-Ludwig; Zheng, Yuebing | Nature photonics. | 29785202 | 2018 Apr; |
| Microtubule Dynamics Scale with Cell Size to Set Spindle Length and Assembly Timing. | Lacroix, Benjamin; Letort, Gaëlle; Pitayu, Laras; Sallé, Jérémy; Stefanutti, Marine; Maton, Gilliane; Ladouceur, Anne-Marie; Canman, Julie C; Maddox, Paul S; Maddox, Amy S; Minc, Nicolas; Nédélec, François; Dumont, Julien | Developmental cell. | 29787710 | 2018 05 21; |
| Potentiating Hsp104 activity via phosphomimetic mutations in the middle domain. | Tariq, Amber; Lin, JiaBei; Noll, Megan M; Torrente, Mariana P; Mack, Korrie L; Murillo, Oscar Hernandez; Jackrel, Meredith E; Shorter, James | FEMS yeast research. | 29788207 | 2018 08 01; |
| Hydrogel-Tissue Chemistry: Principles and Applications. | Gradinaru, Viviana; Treweek, Jennifer; Overton, Kristin; Deisseroth, Karl | Annual review of biophysics. | 29792820 | 2018 May 20; |
| Electroencephalographic markers of brain development during sevoflurane anaesthesia in children up to 3 years old. | Cornelissen, L; Kim, S E; Lee, J M; Brown, E N; Purdon, P L; Berde, C B | British journal of anaesthesia. | 29793594 | 2018 Jun; |
| A NOX4/TRPC6 Pathway in Podocyte Calcium Regulation and Renal Damage in Diabetic Kidney Disease. | Ilatovskaya, Daria V; Blass, Gregory; Palygin, Oleg; Levchenko, Vladislav; Pavlov, Tengis S; Grzybowski, Michael N; Winsor, Kristen; Shuyskiy, Leonid S; Geurts, Aron M; Cowley Jr, Allen W; Birnbaumer, Lutz; Staruschenko, Alexander | Journal of the American Society of Nephrology : JASN. | 29793963 | 2018 07; |
| Development and Evaluation of a Reverse-Entry Ion Source Orbitrap Mass Spectrometer. | Poltash, Michael L; McCabe, Jacob W; Patrick, John W; Laganowsky, Arthur; Russell, David H | Journal of the American Society for Mass Spectrometry. | 29796735 | 2018 May 23; |
| Estimating Cardiac Sympathetic Activity From Subcutaneous Nerve Recordings: More Than Skin Deep? | Dusi, Veronica; Ajijola, Olujimi A | JACC. Clinical electrophysiology. | 29798800 | 2018 05; |
| Optothermal Manipulations of Colloidal Particles and Living Cells. | Lin, Linhan; Hill, Eric H; Peng, Xiaolei; Zheng, Yuebing | Accounts of chemical research. | 29799720 | 2018 Jun 19; |
| Persuasion and influence: what makes a successful persuader? | Baek, Elisa C; Falk, Emily B | Current opinion in psychology. | 29803961 | 2018 12; |
| Distant Insulin Signaling Regulates Vertebrate Pigmentation through the Sheddase Bace2. | Zhang, Yan M; Zimmer, Milena A; Guardia, Talia; Callahan, Scott J; Mondal, Chandrani; Di Martino, Julie; Takagi, Toshimitsu; Fennell, Myles; Garippa, Ralph; Campbell, Nathaniel R; Bravo-Cordero, Jose Javier; White, Richard M | Developmental cell. | 29804876 | 2018 06 04; |
| Genetically Encoded Toolbox for Glycocalyx Engineering: Tunable Control of Cell Adhesion, Survival, and Cancer Cell Behaviors. | Shurer, Carolyn R; Colville, Marshall J; Gupta, Vivek K; Head, Shelby E; Kai, FuiBoon; Lakins, Jonathon N; Paszek, Matthew J | ACS biomaterials science & engineering. | 29805991 | 2018 Feb 12; |
| It's not magic - Hsp90 and its effects on genetic and epigenetic variation. | Zabinsky, Rebecca A; Mason, Grace Alexandria; Queitsch, Christine; Jarosz, Daniel F | Seminars in cell & developmental biology. | 29807130 | 2018 Jun 05; |
| Self-Assembly of Extracellular Vesicle-like Metal-Organic Framework Nanoparticles for Protection and Intracellular Delivery of Biofunctional Proteins. | Cheng, Gong; Li, Wenqing; Ha, Laura; Han, Xiaohui; Hao, Sijie; Wan, Yuan; Wang, Zhigang; Dong, Fengping; Zou, Xin; Mao, Yingwei; Zheng, Si-Yang | Journal of the American Chemical Society. | 29809001 | 2018 06 13; |
| The ER membrane protein complex interacts cotranslationally to enable biogenesis of multipass membrane proteins. | Shurtleff, Matthew J; Itzhak, Daniel N; Hussmann, Jeffrey A; Schirle Oakdale, Nicole T; Costa, Elizabeth A; Jonikas, Martin; Weibezahn, Jimena; Popova, Katerina D; Jan, Calvin H; Sinitcyn, Pavel; Vembar, Shruthi S; Hernandez, Hilda; Cox, Jürgen; Burlingame, Alma L; Brodsky, Jeffrey L; Frost, Adam; Borner, Georg Hh; Weissman, Jonathan S | eLife. | 29809151 | 2018 05 29; |
| Light sheet theta microscopy for rapid high-resolution imaging of large biological samples. | Migliori, Bianca; Datta, Malika S; Dupre, Christophe; Apak, Mehmet C; Asano, Shoh; Gao, Ruixuan; Boyden, Edward S; Hermanson, Ola; Yuste, Rafael; Tomer, Raju | BMC biology. | 29843722 | 2018 May 29; |
| Clofazimine for the Treatment of Mycobacterium kansasii. | Srivastava, Shashikant; Gumbo, Tawanda | Antimicrobial agents and chemotherapy. | 29844047 | 2018 08; |
| Male germ cells support long-term propagation of Zika virus. | Robinson, Christopher L; Chong, Angie C N; Ashbrook, Alison W; Jeng, Ginnie; Jin, Julia; Chen, Haiqi; Tang, Elizabeth I; Martin, Laura A; Kim, Rosa S; Kenyon, Reyn M; Do, Eileen; Luna, Joseph M; Saeed, Mohsan; Zeltser, Lori; Ralph, Harold; Dudley, Vanessa L; Goldstein, Marc; Rice, Charles M; Cheng, C Yan; Seandel, Marco; Chen, Shuibing | Nature communications. | 29844387 | 2018 05 29; |
| Mechanisms for the epigenetic inheritance of stress response in single cells. | Xue, Yuan; Acar, Murat | Current genetics. | 29846762 | 2018 May 30; |
| Identification of Drivers of Aneuploidy in Breast Tumors. | Pfister, Katherine; Pipka, Justyna L; Chiang, Colby; Liu, Yunxian; Clark, Royden A; Keller, Ray; Skoglund, Paul; Guertin, Michael J; Hall, Ira M; Stukenberg, P Todd | Cell reports. | 29847804 | ; |
| Aptamer Recognition of Multiplexed Small-Molecule-Functionalized Substrates. | Nakatsuka, Nako; Cao, Huan H; Deshayes, Stephanie; Melkonian, Arin L; Kasko, Andrea M; Weiss, Paul S; Andrews, Anne M | ACS applied materials & interfaces. | 29851335 | 2018 Jul 18; |
| Ultrafast neuronal imaging of dopamine dynamics with designed genetically encoded sensors. | Patriarchi, Tommaso; Cho, Jounhong Ryan; Merten, Katharina; Howe, Mark W; Marley, Aaron; Xiong, Wei-Hong; Folk, Robert W; Broussard, Gerard Joey; Liang, Ruqiang; Jang, Min Jee; Zhong, Haining; Dombeck, Daniel; von Zastrow, Mark; Nimmerjahn, Axel; Gradinar | Science (New York, N.Y.). | 29853555 | 2018 Jun 29; |
| Drug repositioning for prostate cancer: using a data-driven approach to gain new insights. | Wang, QuanQiu; Xu, Rong | AMIA ... Annual Symposium proceedings. AMIA Symposium. | 29854243 | 2017; |
| Combining mechanism-based prediction with patient-based profiling for psoriasis metabolomics biomarker discovery. | Wang, QuanQiu; McCormick, Thomas S; Ward, Nicole L; Cooper, Kevin D; Conic, Ruzica; Xu, Rong | AMIA ... Annual Symposium proceedings. AMIA Symposium. | 29854244 | 2017; |
| Posttransplant Tacrolimus-Induced Diabetic Ketoacidosis: Review of the Literature. | Ammari, Zaid; Pak, Stella C; Ruzieh, Mohammed; Dasa, Osama; Tiwari, Abhinav; Jaume, Juan C; Alfonso-Jaume, Maria A | Case reports in endocrinology. | 29854487 | 2018; |
| Dynamical features in fetal and postnatal zinc-copper metabolic cycles predict the emergence of autism spectrum disorder. | Curtin, Paul; Austin, Christine; Curtin, Austen; Gennings, Chris; Arora, Manish; (for the Emergent Dynamical Systems Group); Tammimies, Kristiina; Willfors, Charlotte; Berggren, Steve; Siper, Paige; Rai, Dheeraj; Meyering, Kristin; Kolevzon, Alexander; Mo | Science advances. | 29854952 | 2018 May; |
| Genome-wide meta-analysis of SNP-by9-ACEI/ARB and SNP-by-thiazide diuretic and effect on serum potassium in cohorts of European and African ancestry. | Irvin, Marguerite R; Sitlani, Colleen M; Noordam, Raymond; Avery, Christie L; Bis, Joshua C; Floyd, James S; Li, Jin; Limdi, Nita A; Srinivasasainagendra, Vinodh; Stewart, James; de Mutsert, Renée; Mook-Kanamori, Dennis O; Lipovich, Leonard; Kleinbrink, E | The pharmacogenomics journal. | 29855607 | 2019 02; |
| Non-equilibrium repressor binding kinetics link DNA damage dose to transcriptional timing within the SOS gene network. | Culyba, Matthew J; Kubiak, Jeffrey M; Mo, Charlie Y; Goulian, Mark; Kohli, Rahul M | PLoS genetics. | 29856734 | 2018 06; |
| The Clash of Macromolecular Titans: Replication-Transcription Conflicts in Bacteria. | Lang, Kevin S; Merrikh, Houra | Annual review of microbiology. | 29856930 | 2018 Sep 08; |
| A Fine-Scale Functional Logic to Convergence from Retina to Thalamus. | Liang, Liang; Fratzl, Alex; Goldey, Glenn; Ramesh, Rohan N; Sugden, Arthur U; Morgan, Josh L; Chen, Chinfei; Andermann, Mark L | Cell. | 29856953 | 2018 May 31; |
| Targeting phosphatases of regenerating liver (PRLs) in cancer. | Wei, Min; Korotkov, Konstantin V; Blackburn, Jessica S | Pharmacology & therapeutics | 29859177 | 2018 Oct |
| Protein Phase Separation Provides Long-Term Memory of Transient Spatial Stimuli. | Dine, Elliot; Gil, Agnieszka A; Uribe, Giselle; Brangwynne, Clifford P; Toettcher, Jared E | Cell systems. | 29859829 | 2018 Jun 27; |
| The SS18-SSX Fusion Oncoprotein Hijacks BAF Complex Targeting and Function to Drive Synovial Sarcoma. | McBride, Matthew J; Pulice, John L; Beird, Hannah C; Ingram, Davis R; D'Avino, Andrew R; Shern, Jack F; Charville, Gregory W; Hornick, Jason L; Nakayama, Robert T; Garcia-Rivera, Enrique M; Araujo, Dejka M; Wang, Wei-Lien; Tsai, Jen-Wei; Yeagley, Michelle; Wagner, Andrew J; Futreal, P Andrew; Khan, Javed; Lazar, Alexander J; Kadoch, Cigall | Cancer cell. | 29861296 | 2018 06 11; |
| Clinical Implications of Revised Pooled Cohort Equations for Estimating Atherosclerotic Cardiovascular Disease Risk. | Yadlowsky, Steve; Hayward, Rodney A; Sussman, Jeremy B; McClelland, Robyn L; Min, Yuan-I; Basu, Sanjay | Annals of internal medicine. | 29868850 | 2018 07 03; |
| Engaging myosin VI tunes motility, morphology and identity in endocytosis. | Ritt, Michael; Sivaramakrishnan, Sivaraj | Traffic (Copenhagen, Denmark). | 29869361 | 2018 Jun 04; |
| Estimating the impact of changes to occupational standards for silica exposure on lung cancer mortality. | Keil, Alexander P; Richardson, David B; Westreich, Daniel; Steenland, Kyle | Epidemiology (Cambridge, Mass.). | 29870429 | 2018 Jun 04; |
| Using Social Media to Target Cancer Prevention in Young Adults: Viewpoint. | Sarkar, Urmimala; Le, Gem M; Lyles, Courtney R; Ramo, Danielle; Linos, Eleni; Bibbins-Domingo, Kirsten | Journal of medical Internet research. | 29871850 | 2018 Jun 05; |
| RNA Sequencing Reveals Novel Transcripts from Sympathetic Stellate Ganglia During Cardiac Sympathetic Hyperactivity. | Bardsley, Emma N; Davis, Harvey; Ajijola, Olujimi A; Buckler, Keith J; Ardell, Jeffrey L; Shivkumar, Kalyanam; Paterson, David J | Scientific reports. | 29872217 | 2018 Jun 05; |
| Electrophoretic cytopathology resolves ERBB2 forms with single-cell resolution. | Kang, Chi-Chih; Ward, Toby M; Bockhorn, Jessica; Schiffman, Courtney; Huang, Haiyan; Pegram, Mark D; Herr, Amy E | NPJ precision oncology. | 29872719 | 2018; |
| Scarless genome editing: progress towards understanding genotype-phenotype relationships. | Elison, Gregory L; Acar, Murat | Current genetics. | 29872908 | 2018 Jun 05; |
| Metallic Nanoislands on Graphene for Monitoring Swallowing Activity in Head and Neck Cancer Patients. | Ramírez, Julian; Rodriquez, Daniel; Qiao, Fang; Warchall, Julian; Rye, Jasmine; Aklile, Eden; S-C Chiang, Andrew; Marin, Brandon C; Mercier, Patrick P; Cheng, C K; Hutcheson, Katherine A; Shinn, Eileen H; Lipomi, Darren J | ACS nano. | 29874030 | 2018 Jun 08; |
| Bioorthogonal Metabolic Labeling of Nascent RNA in Neurons Improves the Sensitivity of Transcriptome-Wide Profiling. | Zajaczkowski, Esmi L; Zhao, Qiong-Yi; Zhang, Zong Hong; Li, Xiang; Wei, Wei; Marshall, Paul R; Leighton, Laura J; Nainar, Sarah; Feng, Chao; Spitale, Robert C; Bredy, Timothy W | ACS chemical neuroscience. | 29874042 | 2018 Jul 18; |
| Frequent sgRNA-barcode recombination in single-cell perturbation assays. | Xie, Shiqi; Cooley, Anne; Armendariz, Daniel; Zhou, Pei; Hon, Gary C | PloS one. | 29874289 | 2018; |
| Administration of a Nucleoside Analog Promotes Cancer Cell Death in a Telomerase-Dependent Manner. | Zeng, Xuehuo; Hernandez-Sanchez, Wilnelly; Xu, Mengyuan; Whited, Tawna L; Baus, Diane; Zhang, Junran; Berdis, Anthony J; Taylor, Derek J | Cell reports. | 29874588 | 2018 06 05; |
| High-Quality Genome Assemblies Reveal Long Non-coding RNAs Expressed in Ant Brains. | Shields, Emily J; Sheng, Lihong; Weiner, Amber K; Garcia, Benjamin A; Bonasio, Roberto | Cell reports. | 29874592 | 2018 Jun 05; |
| Mechanism of how augmin directly targets the ?-tubulin ring complex to microtubules. | Song, Jae-Geun; King, Matthew R; Zhang, Rui; Kadzik, Rachel S; Thawani, Akanksha; Petry, Sabine | The Journal of cell biology. | 29875259 | 2018 Jul 02; |
| Vms1p is a release factor for the ribosome-associated quality control complex. | Zurita Rendón, Olga; Fredrickson, Eric K; Howard, Conor J; Van Vranken, Jonathan; Fogarty, Sarah; Tolley, Neal D; Kalia, Raghav; Osuna, Beatriz A; Shen, Peter S; Hill, Christopher P; Frost, Adam; Rutter, Jared | Nature communications. | 29875445 | 2018 06 06; |
| Nanoscale partitioning of paclitaxel in hybrid lipid-polymer membranes. | Tuteja, Mohit; Kang, Minjee; Leal, Cecilia; Centrone, Andrea | The Analyst. | 29878001 | 2018 Aug 06; |
| Influenza Virus Infectivity Is Retained in Aerosols and Droplets Independent of Relative Humidity. | Kormuth, Karen A; Lin, Kaisen; Prussin 2nd, Aaron J; Vejerano, Eric P; Tiwari, Andrea J; Cox, Steve S; Myerburg, Michael M; Lakdawala, Seema S; Marr, Linsey C | The Journal of infectious diseases. | 29878137 | 2018 07 24; |
| Basket trial of TRK inhibitors demonstrates efficacy in TRK fusion-positive cancers. | Chen, Yu; Chi, Ping | Journal of hematology & oncology. | 29880008 | 2018 06 07; |
| Meta-analysis of human genome-microbiome association studies: the MiBioGen consortium initiative. | Wang, Jun; Kurilshikov, Alexander; Radjabzadeh, Djawad; Turpin, Williams; Croitoru, Kenneth; Bonder, Marc Jan; Jackson, Matthew A; Medina-Gomez, Carolina; Frost, Fabian; Homuth, Georg; Rühlemann, Malte; Hughes, David; Kim, Han-Na; MiBioGen Consortium Initiative; Spector, Tim D; Bell, Jordana T; Steves, Claire J; Timpson, Nicolas; Franke, Andre; Wijmenga, Cisca; Meyer, Katie; Kacprowski, Tim; Franke, Lude; Paterson, Andrew D; Raes, Jeroen; Kraaij, Robert; Zhernakova, Alexandra | Microbiome. | 29880062 | 2018 06 08; |
| Cortical Reorganization of Sensorimotor Systems and the Role of Intracortical Circuits After Spinal Cord Injury. | Mohammed, Hisham; Hollis 2nd, Edmund R | Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics. | 29882081 | 2018 07; |
| Immune History and Influenza Vaccine Effectiveness. | Lewnard, Joseph A; Cobey, Sarah | Vaccines. | 29883414 | 2018 May 21; |
| Cutting the Gordian Knot of the Microbiota. | Vasquez, Kimberly S; Shiver, Anthony L; Huang, Kerwyn Casey | Molecular cell. | 29883604 | 2018 06 07; |
| MLKL Requires the Inositol Phosphate Code to Execute Necroptosis. | Dovey, Cole M; Diep, Jonathan; Clarke, Bradley P; Hale, Andrew T; McNamara, Dan E; Guo, Hongyan; Brown Jr, Nathaniel W; Cao, Jennifer Yinuo; Grace, Christy R; Gough, Peter J; Bertin, John; Dixon, Scott J; Fiedler, Dorothea; Mocarski, Edward S; Kaiser, William J; Moldoveanu, Tudor; York, John D; Carette, Jan E | Molecular cell. | 29883610 | 2018 06 07; |
| Recent advances in activating silent biosynthetic gene clusters in bacteria. | Mao, Dainan; Okada, Bethany K; Wu, Yihan; Xu, Fei; Seyedsayamdost, Mohammad R | Current opinion in microbiology. | 29883774 | 2018 Jun 05; |
| Structural and biochemical characterization of SpoIIIAF, a component of a sporulation-essential channel in Bacillus subtilis. | Zeytuni, N; Flanagan, K A; Worrall, L J; Massoni, S C; Camp, A H; Strynadka, N C J | Journal of structural biology. | 29886194 | 2018 10; |
| A bioinspired microfluidic model of liquid plug-induced mechanical airway injury. | Song, Joseph W; Paek, Jungwook; Park, Kyu-Tae; Seo, Jeongyun; Huh, Dongeun | Biomicrofluidics. | 29887935 | 2018 Jul; |
| Divergent projection patterns of M1 ipRGC subtypes. | Li, Jennifer Y; Schmidt, Tiffany M | The Journal of comparative neurology. | 29888785 | 2018 Jun 11; |
| Fas ligand promotes an inducible TLR-dependent model of cutaneous lupus-like inflammation. | Mande, Purvi; Zirak, Bahar; Ko, Wei-Che; Taravati, Keyon; Bride, Karen L; Brodeur, Tia Y; Deng, April; Dresser, Karen; Jiang, Zhaozhao; Ettinger, Rachel; Fitzgerald, Katherine A; Rosenblum, Michael D; Harris, John E; Marshak-Rothstein, Ann | The Journal of clinical investigation. | 29889098 | 2018 Jun 11; |
| Exposure to Community Violence and Self-harm in California: A Multilevel, Population-based, Case-Control Study. | Matthay, Ellicott C; Farkas, Kriszta; Skeem, Jennifer; Ahern, Jennifer | Epidemiology (Cambridge, Mass.). | 29889134 | 2018 09; |
| Single Molecule Fluorescence In Situ Hybridization (smFISH) Analysis in Budding Yeast Vegetative Growth and Meiosis. | Chen, Jingxun; McSwiggen, David; Ünal, Elçin | Journal of visualized experiments : JoVE. | 29889208 | 2018 05 25; |
| An Ultrahigh-throughput Microfluidic Platform for Single-cell Genome Sequencing. | Demaree, Benjamin; Weisgerber, Daniel; Lan, Freeman; Abate, Adam R | Journal of visualized experiments : JoVE. | 29889211 | 2018 05 23; |
| Precise, automated control of conditions for high-throughput growth of yeast and bacteria with eVOLVER. | Wong, Brandon G; Mancuso, Christopher P; Kiriakov, Szilvia; Bashor, Caleb J; Khalil, Ahmad S | Nature biotechnology. | 29889214 | 2018 Aug; |
| Acute Changes in Community Violence and Increases in Hospital Visits and Deaths From Stress-responsive Diseases. | Ahern, Jennifer; Matthay, Ellicott C; Goin, Dana E; Farkas, Kriszta; Rudolph, Kara E | Epidemiology (Cambridge, Mass.). | 29889688 | 2018 09; |
| Analyzing Circulating Tumor Cells One at a Time. | Ortiz, Veronica; Yu, Min | Trends in cell biology. | 29891227 | 2018 Jun 08; |
| Texturing Silicon Nanowires for Highly Localized Optical Modulation of Cellular Dynamics. | Fang, Yin; Jiang, Yuanwen; Acaron Ledesma, Hector; Yi, Jaeseok; Gao, Xiang; Weiss, Dara E; Shi, Fengyuan; Tian, Bozhi | Nano letters. | 29894630 | 2018 Jul 11; |
| Mycobacterium tuberculosis Pst/SenX3-RegX3 Regulates Membrane Vesicle Production Independently of ESX-5 Activity. | White, Dylan W; Elliott, Sarah R; Odean, Evan; Bemis, Lynne T; Tischler, Anna D | mBio. | 29895636 | 2018 06 12; |
| Targeting EZH2 Reprograms Intratumoral Regulatory T Cells to Enhance Cancer Immunity. | Wang, David; Quiros, Jason; Mahuron, Kelly; Pai, Chien-Chun; Ranzani, Valeria; Young, Arabella; Silveria, Stephanie; Harwin, Tory; Abnousian, Arbi; Pagani, Massimiliano; Rosenblum, Michael D; Van Gool, Frederic; Fong, Lawrence; Bluestone, Jeffrey A; DuPag | Cell reports. | 29898397 | 2018 Jun 12; |
| Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36. | Chen, Michael C; Tippana, Ramreddy; Demeshkina, Natalia A; Murat, Pierre; Balasubramanian, Shankar; Myong, Sua; Ferré-D'Amaré, Adrian R | Nature. | 29899445 | 2018 06; |
| Structural basis of mitochondrial receptor binding and constriction by DRP1. | Kalia, Raghav; Wang, Ray Yu-Ruei; Yusuf, Ali; Thomas, Paul V; Agard, David A; Shaw, Janet M; Frost, Adam | Nature. | 29899447 | 2018 06; |
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| Blood-brainbarrier disruption dictates nanoparticle accumulation following experimental brain injury. | Bharadwaj, Vimala N; Rowe, Rachel K; Harrison, Jordan; Wu, Chen; Anderson, Trent R; Lifshitz, Jonathan; Adelson, P David; Kodibagkar, Vikram D; Stabenfeldt, Sarah E | Nanomedicine : nanotechnology, biology, and medicine. | 29933022 | 2018 Jun 19; |
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| SAVER: gene expression recovery for single-cell RNA sequencing. | Huang, Mo; Wang, Jingshu; Torre, Eduardo; Dueck, Hannah; Shaffer, Sydney; Bonasio, Roberto; Murray, John I; Raj, Arjun; Li, Mingyao; Zhang, Nancy R | Nature methods. | 29941873 | 2018 Jul; |
| Aspartate is a limiting metabolite for cancer cell proliferation under hypoxia and in tumours. | Garcia-Bermudez, Javier; Baudrier, Lou; La, Konnor; Zhu, Xiphias Ge; Fidelin, Justine; Sviderskiy, Vladislav O; Papagiannakopoulos, Thales; Molina, Henrik; Snuderl, Matija; Lewis, Caroline A; Possemato, Richard L; Birsoy, K?vanç | Nature cell biology. | 29941933 | 2018 Jul; |
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| Effect of ionic strength on shear-thinning nanoclay-polymer composite hydrogels. | Sheikhi, Amir; Afewerki, Samson; Oklu, Rahmi; Gaharwar, Akhilesh K; Khademhosseini, Ali | Biomaterials science. | 29944151 | 2018 Jul 24; |
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| Genetic Regulation of Fibroblast Activation and Proliferation in Cardiac Fibrosis. | Park, Shuin; Ranjbarvazirj, Sara; Lay, Fides D; Zhao, Peng; Miller, Mark J; Dhaliwal, Jasmeet S; Huertas-Vazquez, Adriana; Wu, Xiuju; Qiao, Rong; Soffer, Justin M; Mikkola, Hanna K A; Lusis, Aldons J; Ardehali, Reza | Circulation. | 29950403 | ; |
| ATR kinase inhibitor AZD6738 potentiates CD8+ T cell-dependent antitumor activity following radiation. | Vendetti, Frank P; Karukonda, Pooja; Clump, David A; Teo, Troy; Lalonde, Ronald; Nugent, Katriana; Ballew, Matthew; Kiesel, Brian F; Beumer, Jan H; Sarkar, Saumendra N; Conrads, Thomas P; O'Connor, Mark J; Ferris, Robert L; Tran, Phuoc T; Delgoffe, Greg M | The Journal of clinical investigation. | 29952768 | 2018 Aug 31; |
| Cryo-EM structure of a mitochondrial calcium uniporter. | Yoo, Jiho; Wu, Mengyu; Yin, Ying; Herzik Jr, Mark A; Lander, Gabriel C; Lee, Seok-Yong | Science (New York, N.Y.). | 29954988 | 2018 08 03; |
| Study of IgE-Producing B Cells Using the Verigem Fluorescent Reporter Mouse. | Yang, Zhiyong; Jung, James B; Allen, Christopher D C | Methods in molecular biology (Clifton, N.J.). | 29956157 | 2018; |
| Chromatin Preparation from Murine Eosinophils for Genome-Wide Analyses. | Bouffi, Carine; Barski, Artem; Fulkerson, Patricia C | Methods in molecular biology (Clifton, N.J.). | 29956158 | ; |
| Single Molecule Imaging in Live Embryos Using Lattice Light-Sheet Microscopy. | Mir, Mustafa; Reimer, Armando; Stadler, Michael; Tangara, Astou; Hansen, Anders S; Hockemeyer, Dirk; Eisen, Michael B; Garcia, Hernan; Darzacq, Xavier | Methods in molecular biology (Clifton, N.J.). | 29956254 | 2018; |
| The Control of Vocal Pitch in Human Laryngeal Motor Cortex. | Dichter, Benjamin K; Breshears, Jonathan D; Leonard, Matthew K; Chang, Edward F | Cell. | 29958109 | 2018 06 28; |
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| High-Throughput Microfluidic Sorting of Live Magnetotactic Bacteria. | Tay, Andy; Pfeiffer, Daniel; Rowe, Kathryn; Tannenbaum, Aaron; Popp, Felix; Strangeway, Robert; Schüler, Dirk; Di Carlo, Dino | Applied and environmental microbiology. | 29959254 | 2018 09 01; |
| Four Key Steps Control Glycolytic Flux in Mammalian Cells. | Tanner, Lukas Bahati; Goglia, Alexander G; Wei, Monica H; Sehgal, Talen; Parsons, Lance R; Park, Junyoung O; White, Eileen; Toettcher, Jared E; Rabinowitz, Joshua D | Cell systems. | 29960885 | 2018 Jul 25; |
| Direct Visualization of the Conformational Dynamics of Single Influenza Hemagglutinin Trimers. | Das, Dibyendu Kumar; Govindan, Ramesh; Niki?-Spiegel, Ivana; Krammer, Florian; Lemke, Edward A; Munro, James B | Cell. | 29961575 | 2018 Aug 09; |
| Characterization of Wild and Captive Baboon Gut Microbiota and Their Antibiotic Resistomes. | Tsukayama, Pablo; Boolchandani, Manish; Patel, Sanket; Pehrsson, Erica C; Gibson, Molly K; Chiou, Kenneth L; Jolly, Clifford J; Rogers, Jeffrey; Phillips-Conroy, Jane E; Dantas, Gautam | mSystems. | 29963641 | 2018 May-Jun; |
| Persistent neuronal activity in human prefrontal cortex links perception and action. | Haller, Matar; Case, John; Crone, Nathan E; Chang, Edward F; King-Stephens, David; Laxer, Kenneth D; Weber, Peter B; Parvizi, Josef; Knight, Robert T; Shestyuk, Avgusta Y | Nature human behaviour. | 29963646 | 2018 Jan; |
| Engineering Intravenously Administered Nanoparticles to Reduce Infusion Reaction and Stop Bleeding in a Large Animal Model of Trauma. | Onwukwe, Chimdiya; Maisha, Nuzhat; Holland, Mark; Varley, Matt; Groynom, Rebecca; Hickman, DaShawn; Uppal, Nishant; Shoffstall, Andrew; Ustin, Jeffrey; Lavik, Erin | Bioconjugate chemistry. | 29965731 | 2018 07 18; |
| Engineered Hsp70 chaperones prevent A?42-induced memory impairments in a Drosophila model of Alzheimer's disease. | Martín-Peña, Alfonso; Rincón-Limas, Diego E; Fernandez-Fúnez, Pedro | Scientific reports. | 29967544 | 2018 Jul 02; |
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| Anticipated burden and mitigation of carbon-dioxide-induced nutritional deficiencies and related diseases: A simulation modeling study. | Weyant, Christopher; Brandeau, Margaret L; Burke, Marshall; Lobell, David B; Bendavid, Eran; Basu, Sanjay | PLoS medicine. | 29969442 | 2018 07; |
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| Massive variation of short tandem repeats with functional consequences across strains of Arabidopsis thaliana. | Press, Maximilian O; McCoy, Rajiv C; Hall, Ashley N; Akey, Joshua M; Queitsch, Christine | Genome research. | 29970452 | 2018 08; |
| Associations Between Gun Shows and Firearm Deaths and Injuries. | Matthay, Ellicott C; Galin, Jessica; Farkas, Kriszta; Rudolph, Kara; Wintemute, Garen; Ahern, Jennifer | Annals of internal medicine. | 29971416 | 2018 07 03; |
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| Peptide density targets and impedes triple negative breast cancer metastasis. | Liu, Daxing; Guo, Peng; McCarthy, Craig; Wang, Biran; Tao, Yu; Auguste, Debra | Nature communications. | 29973594 | 2018 07 04; |
| ''Rho''ing a Cellular Boat with Rearward Membrane Flow. | Bell, George R R; Collins, Sean R | Developmental cell. | 29974859 | 2018 Jul 02; |
| MicroRNAs Overcome Cell Fate Barrier by Reducing EZH2-Controlled REST Stability during Neuronal Conversion of Human Adult Fibroblasts. | Lee, Seong Won; Oh, Young Mi; Lu, Ya-Lin; Kim, Woo Kyung; Yoo, Andrew S | Developmental cell. | 29974865 | 2018 07 02; |
| The Polyene Natural Product Thailandamide A Inhibits Fatty Acid Biosynthesis in Gram-Positive and Gram-Negative Bacteria. | Wu, Yihan; Seyedsayamdost, Mohammad R | Biochemistry. | 29975047 | 2018 07 24; |
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| Enhanced Bacterial Immunity and Mammalian Genome Editing via RNA-Polymerase-Mediated Dislodging of Cas9 from Double-Strand DNA Breaks. | Clarke, Ryan; Heler, Robert; MacDougall, Matthew S; Yeo, Nan Cher; Chavez, Alejandro; Regan, Maureen; Hanakahi, Leslyn; Church, George M; Marraffini, Luciano A; Merrill, Bradley J | Molecular cell. | 29979968 | 2018 07 05; |
| Interstitial telomeric loops and implications of the interaction between TRF2 and lamin A/C. | Smith, Erica D; Garza-Gongora, Arturo G; MacQuarrie, Kyle L; Kosak, Steven T | Differentiation; research in biological diversity. | 29979997 | 2018 Jul - Aug; |
| Cellular toxicity of silicon carbide nanomaterials as a function of morphology. | Chen, Fang; Li, Gongyi; Zhao, Eric Ruike; Li, Jingting; Hableel, Ghanim; Lemaster, Jeanne E; Bai, Yuting; Sen, George L; Jokerst, Jesse V | Biomaterials. | 29980075 | 2018 Oct; |
| P-Rex1 is dispensable for Erk activation and mitogenesis in breast cancer. | Barrio-Real, Laura; Lopez-Haber, Cynthia; Casado-Medrano, Victoria; Goglia, Alexander G; Toettcher, Jared E; Caloca, Maria J; Kazanietz, Marcelo G | Oncotarget. | 29983884 | 2018 Jun 19; |
| Gut microbiota associations with common diseases and prescription medications in a population-based cohort. | Jackson, Matthew A; Verdi, Serena; Maxan, Maria-Emanuela; Shin, Cheol Min; Zierer, Jonas; Bowyer, Ruth C E; Martin, Tiphaine; Williams, Frances M K; Menni, Cristina; Bell, Jordana T; Spector, Tim D; Steves, Claire J | Nature communications. | 29985401 | 2018 07 09; |
| Germline DNA replication timing shapes mammalian genome composition. | Yehuda, Yishai; Blumenfeld, Britny; Mayorek, Nina; Makedonski, Kirill; Vardi, Oriya; Cohen-Daniel, Leonor; Mansour, Yousef; Baror-Sebban, Shulamit; Masika, Hagit; Farago, Marganit; Berger, Michael; Carmi, Shai; Buganim, Yosef; Koren, Amnon; Simon, Itamar | Nucleic acids research | 29986092 | 2018 09 19 |
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| Partners in anti-crime: how interferon-inducible GTPases and autophagy proteins team up in cell-intrinsic host defense. | Coers, Jörn; Brown, Hailey M; Hwang, Seungmin; Taylor, Gregory A | Current opinion in immunology. | 29986303 | 2018 Jul 05; |
| DIA-SIFT: A Precursor and Product Ion Filter for Accurate Stable Isotope Data-Independent Acquisition Proteomics. | Haynes, Sarah E; Majmudar, Jaimeen D; Martin, Brent R | Analytical chemistry. | 29989796 | 2018 Aug 07; |
| A Processive Protein Chimera Introduces Mutations Across Defined DNA Regions in vivo. | Moore, Christopher L; Papa, Louis J; Shoulders, Matthew D | Journal of the American Chemical Society. | 29991261 | 2018 Jul 10; |
| Evolution of a central neural circuit underlies Drosophila mate preferences. | Seeholzer, Laura F; Seppo, Max; Stern, David L; Ruta, Vanessa | Nature. | 29995860 | 2018 07; |
| A MicroRNA-Based Gene-Targeting Tool for Virally Labeling Interneurons in the Rodent Cortex. | Keaveney, Marianna K; Tseng, Hua-An; Ta, Tina L; Gritton, Howard J; Man, Heng-Ye; Han, Xue | Cell reports. | 29996091 | 2018 07 10; |
| Aberrant Calcium Signaling in Astrocytes Inhibits Neuronal Excitability in a Human Down Syndrome Stem Cell Model. | Mizuno, Grace O; Wang, Yinxue; Shi, Guilai; Wang, Yizhi; Sun, Junqing; Papadopoulos, Stelios; Broussard, Gerard J; Unger, Elizabeth K; Deng, Wenbin; Weick, Jason; Bhattacharyya, Anita; Chen, Chao-Yin; Yu, Guoqiang; Looger, Loren L; Tian, Lin | Cell reports. | 29996097 | 2018 Jul 10; |
| Accommodation of Helical Imperfections in Rhodobacter sphaeroides Argonaute Ternary Complexes with Guide RNA and Target DNA. | Liu, Yiwei; Esyunina, Daria; Olovnikov, Ivan; Teplova, Marianna; Kulbachinskiy, Andrey; Aravin, Alexei A; Patel, Dinshaw J | Cell reports. | 29996105 | 2018 07 10; |
| Meta-analysis of RNA sequencing datasets reveals an association between TRAJ23, psoriasis, and IL-17A. | Merleev, Alexander A; Marusina, Alina I; Ma, Chelsea; Elder, James T; Tsoi, Lam C; Raychaudhuri, Siba P; Weidinger, Stephan; Wang, Elizabeth A; Adamopoulos, Iannis E; Luxardi, Guillaume; Gudjonsson, Johann E; Shimoda, Michiko; Maverakis, Emanual | JCI insight. | 29997305 | 2018 07 12; |
| Expansion of hedgehog disrupts mesenchymal identity and induces emphysema phenotype. | Wang, Chaoqun; de Mochel, Nabora S Reyes; Christenson, Stephanie A; Cassandras, Monica; Moon, Rebecca; Brumwell, Alexis N; Byrnes, Lauren E; Li, Alfred; Yokosaki, Yasuyuki; Shan, Peiying; Sneddon, Julie B; Jablons, David; Lee, Patty J; Matthay, Michael A; | The Journal of clinical investigation. | 29999500 | 2018 Oct 01; |
| WASPnest: a worldwide assessment of social Polistine nesting behavior. | Miller, Sara E; Bluher, Sarah E; Bell, Emily; Cini, Alessandro; Silva, Rafael Carvalho da; de Souza, André Rodrigues; Gandia, Kristine M; Jandt, Jennifer; Loope, Kevin; Prato, Amanda; Pruitt, Jonathan N; Rankin, David; Rankin, Erin; Southon, Robin J; Uy, | Ecology. | 29999519 | ; |
| Electronic Preresonance Stimulated Raman Scattering Microscopy. | Wei, Lu; Min, Wei | The journal of physical chemistry letters. | 30001137 | 2018 Aug 02; |
| Archaeal imaging: leading the hunt for new discoveries. | Bisson-Filho, Alexandre W; Zheng, Jenny; Garner, Ethan | Molecular biology of the cell. | 30001185 | 2018 Jul 15; |
| Synaptic Vesicle Endocytosis in Different Model Systems. | Gan, Quan; Watanabe, Shigeki | Frontiers in cellular neuroscience | 30002619 | 2018 |
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| A Low-Cost Mechanical Stretching Device for Uniaxial Strain of Cells: A Platform for Pedagogy in Mechanobiology. | Atcha, Hamza; Davis, Chase T; Sullivan, Nicholas R; Smith, Tim D; Anis, Sara; Dahbour, Waleed Z; Robinson, Zachery R; Grosberg, Anna; Liu, Wendy F | Journal of biomechanical engineering. | 30003248 | 2018 08 01; |
| Single-Cell Multi-omics: An Engine for New Quantitative Models of Gene Regulation. | Packer, Jonathan; Trapnell, Cole | Trends in genetics : TIG. | 30007833 | ; |
| The Stringent Response Determines the Ability of a Commensal Bacterium to Survive Starvation and to Persist in the Gut. | Schofield, Whitman B; Zimmermann-Kogadeeva, Maria; Zimmermann, Michael; Barry, Natasha A; Goodman, Andrew L | Cell host & microbe. | 30008292 | 2018 07 11; |
| Targeted Enhancer Activation by a Subunit of the Integrator Complex. | Barbieri, Elisa; Trizzino, Marco; Welsh, Sarah Ann; Owens, Tori Alexandra; Calabretta, Bruno; Carroll, Martin; Sarma, Kavitha; Gardini, Alessandro | Molecular cell | 30008316 | 2018 07 05 |
| Continuous-Phase Control of a Powered Knee-Ankle Prosthesis: Amputee Experiments Across Speeds and Inclines. | Quintero, David; Villarreal, Dario J; Lambert, Daniel J; Kapp, Susan; Gregg, Robert D | IEEE transactions on robotics : a publication of the IEEE Robotics and Automation Society. | 30008623 | 2018 Jun; |
| D159 and S167 are protective residues in the prion protein from dog and horse, two prion-resistant animals. | Sanchez-Garcia, Jonatan; Fernandez-Funez, Pedro | Neurobiology of disease. | 30010001 | 2018 11; |
| Contact Line Pinning Is Not Required for Nanobubble Stability on Copolymer Brushes. | Bull, David S; Nelson, Nathaniel; Konetski, Danielle; Bowman, Christopher N; Schwartz, Daniel K; Goodwin, Andrew P | The journal of physical chemistry letters. | 30010342 | ; |
| Preventing false discovery of heterogeneous treatment effect subgroups in randomized trials. | Rigdon, Joseph; Baiocchi, Michael; Basu, Sanjay | Trials. | 30012181 | 2018 Jul 16; |
| Different population dynamics in the supplementary motor area and motor cortex during reaching. | Lara, A H; Cunningham, J P; Churchland, M M | Nature communications. | 30013188 | 2018 07 16; |
| Global Proteome Remodeling during ER Stress Involves Hac1-Driven Expression of Long Undecoded Transcript Isoforms. | Van Dalfsen, Kelsey Marie; Hodapp, Stefanie; Keskin, Abdurrahman; Otto, George Maxwell; Berdan, Charles Andrew; Higdon, Andrea; Cheunkarndee, Tia; Nomura, Daniel Koji; Jovanovic, Marko; Brar, Gloria Ann | Developmental cell. | 30016623 | 2018 07 16; |
| Melanopsin Phototransduction Is Repurposed by ipRGC Subtypes to Shape the Function of Distinct Visual Circuits. | Sonoda, Takuma; Lee, Seul Ki; Birnbaumer, Lutz; Schmidt, Tiffany M | Neuron. | 30017393 | 2018 Aug 22; |
| A Critical Role for Thermosensation in Host Seeking by Skin-Penetrating Nematodes. | Bryant, Astra S; Ruiz, Felicitas; Gang, Spencer S; Castelletto, Michelle L; Lopez, Jacqueline B; Hallem, Elissa A | Current biology : CB. | 30017486 | 2018 Jul 23; |
| A Universal Live Cell Barcoding-Platform for Multiplexed Human Single Cell Analysis. | Hartmann, Felix J; Simonds, Erin F; Bendall, Sean C | Scientific reports. | 30018331 | 2018 Jul 17; |
| Neutralization of Streptolysin S-Dependent and Independent Inflammatory Cytokine IL-1? Activity Reduces Pathology During Early Group A Streptococcal Skin Infection. | Flaherty, Rebecca A; Donahue, Deborah L; Carothers, Katelyn E; Ross, Jessica N; Ploplis, Victoria A; Castellino, Francis J; Lee, Shaun W | Frontiers in cellular and infection microbiology. | 30018884 | 2018; |
| Noncoding RNA-nucleated heterochromatin spreading is intrinsically labile and requires accessory elements for epigenetic stability. | Greenstein, R A; Jones, Stephen K; Spivey, Eric C; Rybarski, James R; Finkelstein, Ilya J; Al-Sady, Bassem | eLife. | 30020075 | 2018 Jul 18; |
| Detection of Succinate by Intestinal Tuft Cells Triggers a Type 2 Innate Immune Circuit. | Nadjsombati, Marija S; McGinty, John W; Lyons-Cohen, Miranda R; Jaffe, James B; DiPeso, Lucian; Schneider, Christoph; Miller, Corey N; Pollack, Joshua L; Nagana Gowda, G A; Fontana, Mary F; Erle, David J; Anderson, Mark S; Locksley, Richard M; Raftery, Da | Immunity. | 30021144 | 2018 Jul 17; |
| The outer membrane is an essential load-bearing element in Gram-negative bacteria. | Rojas, Enrique R; Billings, Gabriel; Odermatt, Pascal D; Auer, George K; Zhu, Lillian; Miguel, Amanda; Chang, Fred; Weibel, Douglas B; Theriot, Julie A; Huang, Kerwyn Casey | Nature. | 30022160 | 2018 Jul; |
| Optics-Free, Non-Contact Measurements of Fluids, Bubbles, and Particles in Microchannels Using Metallic Nano-Islands on Graphene. | Dhong, Charles; Edmunds, Samuel J; Ramírez, Julian; Kayser, Laure V; Chen, Fang; Jokerst, Jesse V; Lipomi, Darren J | Nano letters. | 30024767 | 2018 Aug 08; |
| Live-Cell Imaging of Chromatin Condensation Dynamics by CRISPR. | Xue, Yuan; Acar, Murat | iScience. | 30027155 | 2018 Jun 29; |
| Cell-intrinsic and -extrinsic mechanisms promote cell-type-specific cytokinetic diversity. | Davies, Tim; Kim, Han X; Romano Spica, Natalia; Lesea-Pringle, Benjamin J; Dumont, Julien; Shirasu-Hiza, Mimi; Canman, Julie C | eLife. | 30028292 | 2018 07 20; |
| Building a heading signal from anatomically defined neuron types in the Drosophila central complex. | Green, Jonathan; Maimon, Gaby | Current opinion in neurobiology. | 30029143 | 2018 10; |
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| Changing Patient Mindsets About Non-Life-Threatening Symptoms During Oral Immunotherapy: A Randomized Clinical Trial. | Howe, Lauren C; Leibowitz, Kari A; Perry, Margaret A; Bitler, Julie M; Block, Whitney; Kaptchuk, Ted J; Nadeau, Kari C; Crum, Alia J | The journal of allergy and clinical immunology. In practice. | 30682576 | 2019 Jan 22; |
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| Macrocyclic colibactin induces DNA double-strand breaks via copper-mediated oxidative cleavage. | Li, Zhong-Rui; Li, Jie; Cai, Wenlong; Lai, Jennifer Y H; McKinnie, Shaun M K; Zhang, Wei-Peng; Moore, Bradley S; Zhang, Wenjun; Qian, Pei-Yuan | Nature chemistry. | 31527851 | 2019 Oct; |
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| Robust Iterative Stimulation with Self-Antigens Overcomes CD8+ T Cell Tolerance to Self- and Tumor Antigens. | Nelson, Christine E; Thompson, Emily A; Quarnstrom, Clare F; Fraser, Kathryn A; Seelig, Davis M; Bhela, Siddheshvar; Burbach, Brandon J; Masopust, David; Vezys, Vaiva | Cell reports. | 31533033 | 2019 Sep 17; |
| The Growth-Arrest-Specific (GAS)-5 Long Non-Coding RNA: A Fascinating lncRNA Widely Expressed in Cancers. | Goustin, Anton Scott; Thepsuwan, Pattaraporn; Kosir, Mary Ann; Lipovich, Leonard | Non-coding RNA. | 31533355 | 2019 Sep 17; |
| Firearm and Nonfirearm Violence After Operation Peacemaker Fellowship in Richmond, California, 1996-2016. | Matthay, Ellicott C; Farkas, Kriszta; Rudolph, Kara E; Zimmerman, Scott; Barragan, Melissa; Goin, Dana E; Ahern, Jennifer | American journal of public health. | 31536413 | 2019 11; |
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| Silver-Coated Disordered Silicon Nanowires Provide Highly Sensitive Label-Free Glycated Albumin Detection through Molecular Trapping and Plasmonic Hotspot Formation. | Paria, Debadrita; Convertino, Annalisa; Mussi, Valentina; Maiolo, Luca; Barman, Ishan | Advanced healthcare materials. | 33236490 | 2020 Nov 25; |
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| Coarse Raman and optical diffraction tomographic imaging enable label-free phenotyping of isogenic breast cancer cells of varying metastatic potential. | Paidi, Santosh Kumar; Shah, Vaani; Raj, Piyush; Glunde, Kristine; Pandey, Rishikesh; Barman, Ishan | Biosensors & bioelectronics | 33272866 | 2021 Mar 01 |
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| Oligodendroglial glycolytic stress triggers inflammasome activation and neuropathology in Alzheimer's disease. | Zhang, Xinwen; Wang, Rihua; Hu, Di; Sun, Xiaoyan; Fujioka, Hisashi; Lundberg, Kathleen; Chan, Ernest R; Wang, Quanqiu; Xu, Rong; Flanagan, Margaret E; Pieper, Andrew A; Qi, Xin | Science advances | 33277246 | 2020 Dec |
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| Direct evidence that the GPCR CysLTR2 mutant causative of uveal melanoma is constitutively active with highly biased signaling. | Ceraudo, Emilie; Horioka, Mizuho; Mattheisen, Jordan M; Hitchman, Tyler D; Moore, Amanda R; Kazmi, Manija A; Chi, Ping; Chen, Yu; Sakmar, Thomas P; Huber, Thomas | The Journal of biological chemistry | 33288675 | 2020 Dec 06 |
| Highly sensitive spatial transcriptomics at near-cellular resolution with Slide-seqV2. | Stickels, Robert R; Murray, Evan; Kumar, Pawan; Li, Jilong; Marshall, Jamie L; Di Bella, Daniela J; Arlotta, Paola; Macosko, Evan Z; Chen, Fei | Nature biotechnology | 33288904 | 2021 03 |
| Micelle-enabled self-assembly of porous and monolithic carbon membranes for bioelectronic interfaces. | Fang, Yin; Prominski, Aleksander; Rotenberg, Menahem Y; Meng, Lingyuan; Acarón Ledesma, Héctor; Lv, Yingying; Yue, Jiping; Schaumann, Erik; Jeong, Junyoung; Yamamoto, Naomi; Jiang, Yuanwen; Elbaz, Benayahu; Wei, Wei; Tian, Bozhi | Nature nanotechnology | 33288948 | 2021 02 |
| High- and low-molecular-weight chitosan act as adjuvants during single-dose influenza A virus protein vaccination through distinct mechanisms. | Lampe, Anna T; Farris, Eric J; Brown, Deborah M; Pannier, Angela K | Biotechnology and bioengineering | 33289090 | 2021 Mar |
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| N-Acetyl-L-cysteine Promotes Ex Vivo Growth and Expansion of Single Circulating Tumor Cells by Mitigating Cellular Stress Responses. | Teng, Teng; Kamal, Mohamed; Iriondo, Oihana; Amzaleg, Yonatan; Luo, Chunqiao; Thomas, Amal; Lee, Grace; Hsu, Ching-Ju; Nguyen, John D; Kang, Irene; Hicks, James; Smith, Andrew; Sposto, Richard; Yu, Min | Molecular cancer research : MCR | 33303691 | 2021 Mar |
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| Targeting de novo purine synthesis pathway via ADSL depletion impairs liver cancer growth by perturbing mitochondrial function. | Jiang, Tingting; Sánchez-Rivera, Francisco J; Soto-Feliciano, Yadira M; Yang, Qiyuan; Song, Chun-Qing; Bhuatkar, Arjun; Haynes, Cole M; Hemann, Michael T; Xue, Wen | Hepatology (Baltimore, Md.) | 33336367 | 2020 Dec 17 |
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| Fatigue, anxiety, and quality of life in breast cancer patients compared to non-cancer controls: a nationwide longitudinal analysis. | Williams, AnnaLynn M; Khan, Carly Paterson; Heckler, Charles E; Barton, Debra L; Ontko, Mary; Geer, Jodi; Kleckner, Amber S; Dakhil, Shaker; Mitchell, Jerry; Mustian, Karen M; Peppone, Luke J; Kipnis, Victor; Kamen, Charles S; O'Mara, Ann M; Janelsins, Michelle C | Breast cancer research and treatment | 33392843 | 2021 May |
| Ascending arousal network connectivity during recovery from traumatic coma. | Snider, Samuel B; Bodien, Yelena G; Frau-Pascual, Aina; Bianciardi, Marta; Foulkes, Andrea S; Edlow, Brian L | NeuroImage. Clinical | 33395992 | 2020 |
| The aging transcriptome and cellular landscape of the human lung in relation to SARS-CoV-2. | Chow, Ryan D; Majety, Medha; Chen, Sidi | Nature communications | 33397975 | 2021 01 04 |
| Mitochondrial stress induced by continuous stimulation under hypoxia rapidly drives T cell exhaustion. | Scharping, Nicole E; Rivadeneira, Dayana B; Menk, Ashley V; Vignali, Paolo D A; Ford, B Rhodes; Rittenhouse, Natalie L; Peralta, Ronal; Wang, Yiyang; Wang, Yupeng; DePeaux, Kristin; Poholek, Amanda C; Delgoffe, Greg M | Nature immunology | 33398183 | 2021 Feb |
| SARS-CoV-2 Testing in Florida, Illinois, and Maryland: Access and Barriers. | Clipman, Steven J; Wesolowski, Amy; Mehta, Shruti H; Agarwal, Smisha; Cobey, Sarah E; Cummings, Derek A T; Gibson, Dustin G; Labrique, Alain B; Kirk, Gregory D; Solomon, Sunil S | medRxiv : the preprint server for health sciences | 33398298 | 2020 Dec 24 |
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| Gut-licensed IFNγ+ NK cells drive LAMP1+TRAIL+ anti-inflammatory astrocytes. | Sanmarco, Liliana M; Wheeler, Michael A; Gutiérrez-Vázquez, Cristina; Polonio, Carolina Manganeli; Linnerbauer, Mathias; Pinho-Ribeiro, Felipe A; Li, Zhaorong; Giovannoni, Federico; Batterman, Katelyn V; Scalisi, Giulia; Zandee, Stephanie E J; Heck, Evelyn S; Alsuwailm, Moneera; Rosene, Douglas L; Becher, Burkhard; Chiu, Isaac M; Prat, Alexandre; Quintana, Francisco J | Nature | 33408417 | 2021 Feb |
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| Tractography-Pathology Correlations in Traumatic Brain Injury: A TRACK-TBI Study. | Nolan, Amber L; Petersen, Cathrine; Iacono, Diego; Mac Donald, Christine L; Mukherjee, Pratik; van der Kouwe, Andre; Jain, Sonia; Stevens, Allison; Diamond, Bram R; Wang, Ruopeng; Markowitz, Amy J; Fischl, Bruce; Perl, Daniel P; Manley, Geoffrey T; Keene, C Dirk; Diaz-Arrastia, Ramon; Edlow, Brian L; TRACK-TBI Investigators | Journal of neurotrauma | 33412995 | 2021 Jun 15 |
| Targeting ACSS2 with a Transition-State Mimetic Inhibits Triple-Negative Breast Cancer Growth. | Miller, Katelyn D; Pniewski, Katherine; Perry, Caroline E; Papp, Sara B; Shaffer, Joshua D; Velasco-Silva, Jesse N; Casciano, Jessica C; Aramburu, Tomas M; Srikanth, Yellamelli V V; Cassel, Joel; Skordalakes, Emmanuel; Kossenkov, Andrew V; Salvino, Joseph M; Schug, Zachary T | Cancer research | 33414169 | 2021 03 01 |
| Harnessing nanotechnology to expand the toolbox of chemical biology. | Williams, Ryan M; Chen, Shi; Langenbacher, Rachel E; Galassi, Thomas V; Harvey, Jackson D; Jena, Prakrit V; Budhathoki-Uprety, Januka; Luo, Minkui; Heller, Daniel A | Nature chemical biology | 33414556 | 2021 02 |
| Neurophysiological Correlates of Dynamic Beat Tracking in Individuals With Williams Syndrome. | Kasdan, Anna; Gordon, Reyna L; Lense, Miriam D | Biological psychiatry. Cognitive neuroscience and neuroimaging | 33419711 | 2020 Oct 22 |
| A mosquito small RNA genomics resource reveals dynamic evolution and host responses to viruses and transposons. | Ma, Qicheng; Srivastav, Satyam P; Gamez, Stephanie; Dayama, Gargi; Feitosa-Suntheimer, Fabiana; Patterson, Edward I; Johnson, Rebecca M; Matson, Erik M; Gold, Alexander S; Brackney, Douglas E; Connor, John H; Colpitts, Tonya M; Hughes, Grant L; Rasgon, Ja | Genome research | 33419731 | 2021 Mar |
| Insights into clonal hematopoiesis and its relation to cancer risk. | Mitchell, Shaneice R; Gopakumar, Jayakrishnan; Jaiswal, Siddhartha | Current opinion in genetics & development | 33422951 | 2021 02 |
| Human liver model systems in a dish. | Thompson, Wendy L; Takebe, Takanori | Development, growth & differentiation | 33423319 | 2021 Jan |
| Evaluation of the health impacts of the 1990 Clean Air Act Amendments using causal inference and machine learning. | Nethery, Rachel C; Mealli, Fabrizia; Sacks, Jason D; Dominici, Francesca | Journal of the American Statistical Association | 33424062 | 2020 Sep 16 |
| A quantitative model for metabolic intervention using gut microbes. | Mays, Zachary J S; Nair, Nikhil U | Biotechnology progress | 33426814 | 2021 Jan 10 |
| Toward patient-centered tuberculosis preventive treatment: preferences for regimens and formulations in Lima, Peru. | Yuen, Courtney M; Millones, Ana K; Galea, Jerome T; Puma, Daniela; Jimenez, Judith; Lecca, Leonid; Becerra, Mercedes C; Keshavjee, Salmaan | BMC public health | 33430823 | 2021 Jan 11 |
| An integrated platform for genome engineering and gene expression perturbation in Plasmodium falciparum. | Nasamu, Armiyaw S; Falla, Alejandra; Pasaje, Charisse Flerida A; Wall, Bridget A; Wagner, Jeffrey C; Ganesan, Suresh M; Goldfless, Stephen J; Niles, Jacquin C | Scientific reports | 33431920 | 2021 01 11 |
| Auditory cues reveal intended movement information in middle frontal gyrus neuronal ensemble activity of a person with tetraplegia. | Hosman, Tommy; Hynes, Jacqueline B; Saab, Jad; Wilcoxen, Kaitlin G; Buchbinder, Bradley R; Schmansky, Nicholas; Cash, Sydney S; Eskandar, Emad N; Simeral, John D; Franco, Brian; Kelemen, Jessica; Vargas-Irwin, Carlos E; Hochberg, Leigh R | Scientific reports | 33431994 | 2021 01 11 |
| Drug repurposing for opioid use disorders: integration of computational prediction, clinical corroboration, and mechanism of action analyses. | Zhou, Mengshi; Wang, QuanQiu; Zheng, Chunlei; John Rush, A; Volkow, Nora D; Xu, Rong | Molecular psychiatry | 33432189 | 2021 Sep |
| Large mosaic copy number variations confer autism risk. | Sherman, Maxwell A; Rodin, Rachel E; Genovese, Giulio; Dias, Caroline; Barton, Alison R; Mukamel, Ronen E; Berger, Bonnie; Park, Peter J; Walsh, Christopher A; Loh, Po-Ru | Nature neuroscience | 33432194 | 2021 Feb |
| Engineering human hepato-biliary-pancreatic organoids from pluripotent stem cells. | Koike, Hiroyuki; Iwasawa, Kentaro; Ouchi, Rie; Maezawa, Mari; Kimura, Masaki; Kodaka, Asuka; Nishii, Shozo; Thompson, Wendy L; Takebe, Takanori | Nature protocols | 33432231 | 2021 02 |
| Single-cell transcriptomic profiling of satellite glial cells in stellate ganglia reveals developmental and functional axial dynamics. | van Weperen, Valerie Y H; Littman, Russell J; Arneson, Douglas V; Contreras, Jaime; Yang, Xia; Ajijola, Olujimi A | Glia | 33432730 | 2021 05 |
| Combining simulations and experiments for the molecular engineering of multifunctional collagen mimetic peptide-based materials. | Hilderbrand, Amber M; Taylor, Phillip A; Stanzione, Francesca; LaRue, Mark; Guo, Chen; Jayaraman, Arthi; Kloxin, April M | Soft matter | 33434255 | 2021 Feb 21 |
| Multiplexed characterization of rationally designed promoter architectures deconstructs combinatorial logic for IPTG-inducible systems. | Yu, Timothy C; Liu, Winnie L; Brinck, Marcia S; Davis, Jessica E; Shek, Jeremy; Bower, Grace; Einav, Tal; Insigne, Kimberly D; Phillips, Rob; Kosuri, Sriram; Urtecho, Guillaume | Nature communications | 33436562 | 2021 01 12 |
| Nanomaterials for T-cell cancer immunotherapy. | Gong, Ningqiang; Sheppard, Neil C; Billingsley, Margaret M; June, Carl H; Mitchell, Michael J | Nature nanotechnology | 33437036 | 2021 Jan |
| Type II Binders Targeting the "GLR-Out" Conformation of the Pseudokinase STRADα. | Smith, Ryan H B; Khan, Zaigham M; Ung, Peter Man-Un; Scopton, Alex P; Silber, Lisa; Mack, Seshat M; Real, Alexander M; Schlessinger, Avner; Dar, Arvin C | Biochemistry | 33440120 | 2021 Feb 02 |
| Arrhythmic Risk Profile and Outcomes of Patients Undergoing Cardiac Sympathetic Denervation for Recurrent Monomorphic Ventricular Tachycardia After Ablation. | Dusi, Veronica; Gornbein, Jeffrey; Do, Duc H; Sorg, Julie M; Khakpour, Houman; Krokhaleva, Yuliya; Ajijola, Olujimi A; Macias, Carlos; Bradfield, Jason S; Buch, Eric; Fujimura, Osamu A; Boyle, Noel G; Yanagawa, Jane; Lee, Jay M; Shivkumar, Kalyanam; Vaseghi, Marmar | Journal of the American Heart Association | 33441022 | 2021 01 19 |
| A rate threshold mechanism regulates MAPK stress signaling and survival. | Johnson, Amanda N; Li, Guoliang; Jashnsaz, Hossein; Thiemicke, Alexander; Kesler, Benjamin K; Rogers, Dustin C; Neuert, Gregor | Proceedings of the National Academy of Sciences of the United States of America | 33443180 | 2021 Jan 12 |
| The Impact of the first COVID-19 shelter-in-place announcement on social distancing, difficulty in daily activities, and levels of concern in the San Francisco Bay Area: A cross-sectional social media survey. | Elser, Holly; Kiang, Mathew V; John, Esther M; Simard, Julia F; Bondy, Melissa; Nelson, Lorene M; Chen, Wei-Ting; Linos, Eleni | PloS one | 33444363 | 2021 |
| Discordance Among Antibiotic Prescription Guidelines Reflects a Lack of Clear Best Practices. | Rost, Lauren M; Nguyen, M Hong; Clancy, Cornelius J; Shields, Ryan K; Wright, Erik S | Open forum infectious diseases | 33447636 | 2021 Jan |
| Directional light emission by electric and magnetic dipoles near a nanosphere: an analytical approach based on the generalized Mie theory. | Yao, Kan; Zheng, Yuebing | Optics letters | 33449012 | 2021 Jan 15 |
| Revealing the hidden reality of the mammalian 12-h ultradian rhythms. | Ballance, Heather; Zhu, Bokai | Cellular and molecular life sciences : CMLS | 33449146 | 2021 Jan 15 |
| Pseudomonas aeruginosa detachment from surfaces via a self-made small molecule. | Scheffler, Robert J; Sugimoto, Yuki; Bratton, Benjamin P; Ellison, Courtney K; Koch, Matthias D; Donia, Mohamed S; Gitai, Zemer | The Journal of biological chemistry | 33450229 | 2021 Jan 12 |
| Family history is a predictor of current preterm birth. | Koire, Amanda; Chu, Derrick M; Aagaard, Kjersti | American journal of obstetrics & gynecology MFM | 33451608 | 2021 01 |
| Computationally reconstructing cotranscriptional RNA folding from experimental data reveals rearrangement of non-native folding intermediates. | Yu, Angela M; Gasper, Paul M; Cheng, Luyi; Lai, Lien B; Kaur, Simi; Gopalan, Venkat; Chen, Alan A; Lucks, Julius B | Molecular cell | 33453165 | 2021 02 18 |
| Global mapping of translation initiation sites by TIS profiling in budding yeast. | Hollerer, Ina; Powers, Emily N; Brar, Gloria A | STAR protocols | 33458709 | 2021 Mar 19 |
| A Programmable DNA-Silicification-Based Nanocavity for Single-Molecule Plasmonic Sensing. | Liang, Le; Zheng, Peng; Zhang, Chi; Barman, Ishan | Advanced materials (Deerfield Beach, Fla.) | 33458901 | 2021 Feb |
| Regulatory roles of Escherichia coli 5' UTR and ORF-internal RNAs detected by 3' end mapping. | Adams, Philip P; Baniulyte, Gabriele; Esnault, Caroline; Chegireddy, Kavya; Singh, Navjot; Monge, Molly; Dale, Ryan K; Storz, Gisela; Wade, Joseph T | eLife | 33460557 | 2021 Jan 18 |
| Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation. | Wong, Gerard C L; Antani, Jyot D; Lele, Pushkar; Chen, Jing; Nan, Beiyan; Kühn, Marco Julian; Persat, Alexandre; Bru, Jean-Louis; Høyland-Kroghsbo, Nina Molin; Siryaporn, Albert; Conrad, Jacinta; Carrara, Francesco; Yawata, Yutaka; Stocker, Roman; Brun, Yves; Whitfield, Greg; Lee, Calvin; de Anda, Jaime; Schmidt, William C; Golestanian, Ramin; O'Toole, George A; Floyd, Kyle; Yildiz, Fitnat; Yang, Shuai; Jin, Fan; Toyofuku, Masanori; Eberl, Leo; Nobuhiko, Nomura; Zacharoff, Lori; El-Naggar, Mohamed Y; Yalcin, Sibel Ebru; Malvankar, Nikhil; Rojas-Andrade, Mauricio D; Hochbaum, Allon; Yan, Jing; Stone, Howard A; Wingreen, Ned S; Bassler, Bonnie; Wu, Yilin; Xu, Haoran; Drescher, Knut; Dunkel, Jörn | Physical biology | 33462162 | 2021 Jan 14 |
| Synaptic processes and immune-related pathways implicated in Tourette syndrome. | Tsetsos, Fotis (see original citation for additional authors) | Translational psychiatry | 33462189 | 2021 01 18 |
| High-Yield Preparation of Outer Membrane Protein Efflux Pumps by in Vitro Refolding is Concentration Dependent. | Budiardjo, S Jimmy; Ikujuni, Ayotunde Paul; Firlar, Emre; Cordova, Andrés; Kaelber, Jason T; Slusky, Joanna S G | The Journal of membrane biology | 33462665 | 2021 Jan 19 |
| A multifaceted cellular damage repair and prevention pathway promotes high-level tolerance to β-lactam antibiotics. | Shin, Jung-Ho; Choe, Donghui; Ransegnola, Brett; Hong, Hye-Rim; Onyekwere, Ikenna; Cross, Trevor; Shi, Qiaojuan; Cho, Byung-Kwan; Westblade, Lars F; Brito, Ilana L; Dörr, Tobias | EMBO reports | 33463026 | 2021 Feb 03 |
| Engineering Aligned Skeletal Muscle Tissue Using Decellularized Plant-Derived Scaffolds. | Cheng, Ya-Wen; Shiwarski, Daniel J; Ball, Rebecca L; Whitehead, Kathryn A; Feinberg, Adam W | ACS biomaterials science & engineering | 33463300 | 2020 05 11 |
| Image-based pooled whole-genome CRISPRi screening for subcellular phenotypes. | Kanfer, Gil; Sarraf, Shireen A; Maman, Yaakov; Baldwin, Heather; Dominguez-Martin, Eunice; Johnson, Kory R; Ward, Michael E; Kampmann, Martin; Lippincott-Schwartz, Jennifer; Youle, Richard J | The Journal of cell biology | 33464298 | 2021 Feb 01 |
| Does it matter if a story character lives or dies?: a message experiment comparing survivor and death narratives. | Lillie, Helen M; Pokharel, Manusheela; John, Kevin K; Christy, Katheryn R; Upshaw, Sean; Giorgi, Elizabeth A; Jensen, Jakob D | Psychology & health | 33464969 | 2021 Jan 19 |
| Photopatterned biomolecule immobilization to guide three-dimensional cell fate in natural protein-based hydrogels. | Batalov, Ivan; Stevens, Kelly R; DeForest, Cole A | Proceedings of the National Academy of Sciences of the United States of America | 33468675 | 2021 Jan 26 |
| RanDeL-Seq: a High-Throughput Method to Map Viral cis- and trans-Acting Elements. | Notton, Timothy; Glazier, Joshua J; Saykally, Victoria R; Thompson, Cassandra E; Weinberger, Leor S | mBio | 33468683 | 2021 01 19 |
| Trehalose Recycling Promotes Energy-Efficient Biosynthesis of the Mycobacterial Cell Envelope. | Pohane, Amol Arunrao; Carr, Caleb R; Garhyan, Jaishree; Swarts, Benjamin M; Siegrist, M Sloan | mBio | 33468692 | 2021 01 19 |
| A Picture Worth a Thousand Molecules-Integrative Technologies for Mapping Subcellular Molecular Organization and Plasticity in Developing Circuits. | Minehart, Jacqueline A; Speer, Colenso M | Frontiers in synaptic neuroscience | 33469427 | 2020 |
| A Legionella effector ADP-ribosyltransferase inactivates glutamate dehydrogenase. | Black, Miles H; Osinski, Adam; Park, Gina J; Gradowski, Marcin; Servage, Kelly A; Pawłowski, Krzysztof; Tagliabracci, Vincent S | The Journal of biological chemistry | 33476647 | 2021 Jan 18 |
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| The Hunt for Ancient Prions: Archaeal Prion-Like Domains Form Amyloid-Based Epigenetic Elements. | Zajkowski, Tomasz; Lee, Michael D; Mondal, Shamba S; Carbajal, Amanda; Dec, Robert; Brennock, Patrick D; Piast, Radoslaw W; Snyder, Jessica E; Bense, Nicholas B; Dzwolak, Wojciech; Jarosz, Daniel F; Rothschild, Lynn J | Molecular biology and evolution | 33480998 | 2021 May 04 |
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| Repetitive aeroallergen challenges elucidate maladaptive epithelial and inflammatory traits that underpin allergic airway diseases. | Smith, Alisha M; Harper, Nathan; Meunier, Justin A; Branum, Anne P; Jimenez, Fabio; Pandranki, Lavanya; Carrillo, Andrew; Dela Cruz, Charles S; Restrepo, Marcos I; Maselli, Diego J; Rather, Cynthia G; Heisser, Anna H; Ramirez, Daniel A; He, Weijing; Clark | The Journal of allergy and clinical immunology | 33493557 | 2021 Jan 22 |
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| One-step data storage in cellular DNA. | Bhattarai-Kline, Santi; Lear, Sierra K; Shipman, Seth L | Nature chemical biology | 33500580 | 2021 Mar |
| Pharmacological reversal of synaptic and network pathology in human MECP2-KO neurons and cortical organoids. | Trujillo, Cleber A; Adams, Jason W; Negraes, Priscilla D; Carromeu, Cassiano; Tejwani, Leon; Acab, Allan; Tsuda, Ben; Thomas, Charles A; Sodhi, Neha; Fichter, Katherine M; Romero, Sarah; Zanella, Fabian; Sejnowski, Terrence J; Ulrich, Henning; Muotri, Alysson R | EMBO molecular medicine | 33501759 | 2021 01 11 |
| Pleiotropic mutations can rapidly evolve to directly benefit self and cooperative partner despite unfavorable conditions. | Hart, Samuel Frederick Mock; Chen, Chi-Chun; Shou, Wenying | eLife | 33501915 | 2021 Jan 27 |
| Small-molecule probe reveals a kinase cascade that links stress signaling to TCF/LEF and Wnt responsiveness. | Cheng, Jiongjia; Tsuda, Masanao; Okolotowicz, Karl; Dwyer, Mary; Bushway, Paul J; Colas, Alexandre R; Lancman, Joseph J; Schade, Dennis; Perea-Gil, Isaac; Bruyneel, Arne A N; Lee, Jaechol; Vadgama, Nirmal; Quach, Justine; McKeithan, Wesley L; Biechele, Travis L; Wu, Joseph C; Moon, Randall T; Si Dong, P Duc; Karakikes, Ioannis; Cashman, John R; Mercola, Mark | Cell chemical biology | 33503403 | 2021 May 20 |
| Single-cell proteomic and transcriptomic analysis of macrophage heterogeneity using SCoPE2. | Specht, Harrison; Emmott, Edward; Petelski, Aleksandra A; Huffman, R Gray; Perlman, David H; Serra, Marco; Kharchenko, Peter; Koller, Antonius; Slavov, Nikolai | Genome biology | 33504367 | 2021 Jan 27 |
| Measurement, manipulation and modeling of brain-wide neural population dynamics. | Shenoy, Krishna V; Kao, Jonathan C | Nature communications | 33504773 | 2021 01 27 |
| Treadmilling FtsZ polymers drive the directional movement of sPG-synthesis enzymes via a Brownian ratchet mechanism. | McCausland, Joshua W; Yang, Xinxing; Squyres, Georgia R; Lyu, Zhixin; Bruce, Kevin E; Lamanna, Melissa M; Söderström, Bill; Garner, Ethan C; Winkler, Malcolm E; Xiao, Jie; Liu, Jian | Nature communications | 33504807 | 2021 01 27 |
| Surface chemistry-mediated modulation of adsorbed albumin folding state specifies nanocarrier clearance by distinct macrophage subsets. | Vincent, Michael P; Bobbala, Sharan; Karabin, Nicholas B; Frey, Molly; Liu, Yugang; Navidzadeh, Justin O; Stack, Trevor; Scott, Evan A | Nature communications | 33510170 | 2021 01 28 |
| Epigenetic silencing directs expression heterogeneity of stably integrated multi-transcript unit genetic circuits. | Zimak, Jan; Wagoner, Zachary W; Nelson, Nellie; Waechtler, Brooke; Schlosser, Hana; Kopecky, Morgan; Wu, Jie; Zhao, Weian | Scientific reports | 33510302 | 2021 Jan 28 |
| Asynchronous release sites align with NMDA receptors in mouse hippocampal synapses. | Li, Shuo; Raychaudhuri, Sumana; Lee, Stephen Alexander; Brockmann, Marisa M; Wang, Jing; Kusick, Grant; Prater, Christine; Syed, Sarah; Falahati, Hanieh; Ramos, Raul; Bartol, Tomas M; Hosy, Eric; Watanabe, Shigeki | Nature communications | 33514725 | 2021 01 29 |
| Controllable fusion of human brain organoids using acoustofluidics. | Ao, Zheng; Cai, Hongwei; Wu, Zhuhao; Ott, Jonathan; Wang, Huiliang; Mackie, Ken; Guo, Feng | Lab on a chip | 33514983 | 2021 Feb 23 |
| COVID-19 risk, disparities and outcomes in patients with chronic liver disease in the United States. | Wang, QuanQiu; Davis, Pamela B; Xu, Rong | EClinicalMedicine | 33521611 | 2021 Jan |
| Cell-Free DNA Tissues-of-Origin by Methylation Profiling Reveals Significant Cell, Tissue and Organ-Specific injury related to COVID-19 Severity. | Cheng, Alexandre Pellan; Cheng, Matthew Pellan; Gu, Wei; Lenz, Joan Sesing; Hsu, Elaine; Schurr, Erwin; Bourque, Guillaume; Bourgey, Mathieu; Ritz, Jerome; Marty, Francisco M; Chiu, Charles Y; Vinh, Donald Cuong; De Vlaminck, Iwijn | Med (New York, N.Y.) | 33521749 | 2021 Jan 16 |
| Synthetic bionanotechnology: synthetic biology finds a toehold in nanotechnology. | Green, Alexander A | Emerging topics in life sciences | 33523177 | 2019 Nov 11 |
| Synthetic biology for improving cell fate decisions and tissue engineering outcomes. | Vogel, Adam M; Persson, Kylie M; Seamons, Travis R; Deans, Tara L | Emerging topics in life sciences | 33523179 | 2019 Nov 11 |
| Ionizable lipid nanoparticles for in utero mRNA delivery. | Riley, Rachel S; Kashyap, Meghana V; Billingsley, Margaret M; White, Brandon; Alameh, Mohamad-Gabriel; Bose, Sourav K; Zoltick, Philip W; Li, Hiaying; Zhang, Rui; Cheng, Andrew Y; Weissman, Drew; Peranteau, William H; Mitchell, Michael J | Science advances | 33523869 | 2021 01 |
| Integrating antibiotic stewardship and infection prevention and control programs using a team science approach. | Knobloch, Mary Jo; McKinley, Linda; Keating, Julie; Safdar, Nasia | American journal of infection control | 33524453 | 2021 Jan 29 |
| SiglecF(HI) Marks Late-Stage Neutrophils of the Infarcted Heart: A Single-Cell Transcriptomic Analysis of Neutrophil Diversification. | Calcagno, David M; Zhang, Claire; Toomu, Avinash; Huang, Kenneth; Ninh, Van K; Miyamoto, Shigeki; Aguirre, Aaron D; Fu, Zhenxing; Heller Brown, Joan; King, Kevin R | Journal of the American Heart Association | 33525909 | 2021 02 16 |
| Changing mindsets about side effects. | Leibowitz, Kari A; Howe, Lauren C; Crum, Alia J | BMJ open | 33526496 | 2021 02 01 |
| A glucose meter interface for point-of-care gene circuit-based diagnostics. | Amalfitano, Evan; Karlikow, Margot; Norouzi, Masoud; Jaenes, Katariina; Cicek, Seray; Masum, Fahim; Sadat Mousavi, Peivand; Guo, Yuxiu; Tang, Laura; Sydor, Andrew; Ma, Duo; Pearson, Joel D; Trcka, Daniel; Pinette, Mathieu; Ambagala, Aruna; Babiuk, Shawn; | Nature communications | 33526784 | 2021 02 01 |
| A Single Immunization with Spike-Functionalized Ferritin Vaccines Elicits Neutralizing Antibody Responses against SARS-CoV-2 in Mice. | Powell, Abigail E; Zhang, Kaiming; Sanyal, Mrinmoy; Tang, Shaogeng; Weidenbacher, Payton A; Li, Shanshan; Pham, Tho D; Pak, John E; Chiu, Wah; Kim, Peter S | ACS central science | 33527087 | 2021 Jan 27 |
| Leptin receptor neurons in the dorsomedial hypothalamus regulate diurnal patterns of feeding, locomotion, and metabolism. | Faber, Chelsea L; Deem, Jennifer D; Phan, Bao Anh; Doan, Tammy P; Ogimoto, Kayoko; Mirzadeh, Zaman; Schwartz, Michael W; Morton, Gregory J | eLife | 33527893 | 2021 Feb 02 |
| Pathogenic LMNA variants disrupt cardiac lamina-chromatin interactions and de-repress alternative fate genes. | Shah, Parisha P; Lv, Wenjian; Rhoades, Joshua H; Poleshko, Andrey; Abbey, Deepti; Caporizzo, Matthew A; Linares-Saldana, Ricardo; Heffler, Julie G; Sayed, Nazish; Thomas, Dilip; Wang, Qiaohong; Stanton, Liam J; Bedi, Kenneth; Morley, Michael P; Cappola, Thomas P; Owens, Anjali T; Margulies, Kenneth B; Frank, David B; Wu, Joseph C; Rader, Daniel J; Yang, Wenli; Prosser, Benjamin L; Musunuru, Kiran; Jain, Rajan | Cell stem cell | 33529599 | 2021 Jan 26 |
| Peptide functionalized liposomes for receptor targeted cancer therapy. | Aronson, Matthew R; Medina, Scott H; Mitchell, Michael J | APL bioengineering | 33532673 | 2021 Mar |
| Motif-Raptor: A Cell Type-Specific and Transcription Factor Centric Approach for Post-GWAS Prioritization of Causal Regulators. | Yao, Qiuming; Ferragina, Paolo; Reshef, Yakir; Lettre, Guillaume; Bauer, Daniel E; Pinello, Luca | Bioinformatics (Oxford, England) | 33532840 | 2021 Feb 03 |
| LKB1 and AMPK instruct cone nuclear position to modify visual function. | Burger, Courtney A; Albrecht, Nicholas E; Jiang, Danye; Liang, Justine H; Poché, Ross A; Samuel, Melanie A | Cell reports | 33535040 | 2021 Feb 02 |
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| 5-Fluorouracil efficacy requires anti-tumor immunity triggered by cancer-cell-intrinsic STING. | Tian, Jingru; Zhang, Dingyao; Kurbatov, Vadim; Wang, Qinrong; Wang, Yadong; Fang, Dorthy; Wu, Lizhen; Bosenberg, Marcus; Muzumdar, Mandar D; Khan, Sajid; Lu, Qianjin; Yan, Qin; Lu, Jun | The EMBO journal | 33615517 | 2021 04 01 |
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| Stromal Cell-Derived Factor-1a Autocrine/Paracrine Signaling Contributes to Spatiotemporal Gradients in the Brain. | Hickey, Kassondra N; Grassi, Shannon M; Caplan, Michael R; Stabenfeldt, Sarah E | Cellular and molecular bioengineering | 33643467 | 2021 Feb |
| Phase IB study of sorafenib and evofosfamide in patients with advanced hepatocellular and renal cell carcinomas (NCCTG N1135, Alliance). | Tran, Nguyen H; Foster, Nathan R; Mahipal, Amit; Byrne, Thomas; Hubbard, Joleen; Silva, Alvin; Mody, Kabir; Alberts, Steven; Borad, Mitesh J | Investigational new drugs | 33646489 | 2021 Mar 01 |
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| Topological stress is responsible for the detrimental outcomes of head-on replication-transcription conflicts. | Lang, Kevin S; Merrikh, Houra | Cell reports | 33657379 | 2021 Mar 02 |
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| A confinable home-and-rescue gene drive for population modification. | Kandul, Nikolay P; Liu, Junru; Bennett, Jared B; Marshall, John M; Akbari, Omar S | eLife | 33666174 | 2021 Mar 05 |
| Interleukin 17A: Key Player in the Pathogenesis of Hypertension and a Potential Therapeutic Target. | Davis, Gwendolyn K; Fehrenbach, Daniel J; Madhur, Meena S | Current hypertension reports | 33666761 | 2021 03 05 |
| Inherently confinable split-drive systems in Drosophila. | Terradas, Gerard; Buchman, Anna B; Bennett, Jared B; Shriner, Isaiah; Marshall, John M; Akbari, Omar S; Bier, Ethan | Nature communications | 33674604 | 2021 03 05 |
| Lysosomal retargeting of Myoferlin mitigates membrane stress to enable pancreatic cancer growth. | Gupta, Suprit; Yano, Julian; Mercier, Vincent; Htwe, Htet Htwe; Shin, Hijai R; Rademaker, Gilles; Cakir, Zeynep; Ituarte, Thomas; Wen, Kwun W; Kim, Grace E; Zoncu, Roberto; Roux, Aurélien; Dawson, David W; Perera, Rushika M | Nature cell biology | 33686253 | 2021 03 |
| Rare rewards amplify dopamine responses. | Rothenhoefer, Kathryn M; Hong, Tao; Alikaya, Aydin; Stauffer, William R | Nature neuroscience | 33686298 | 2021 Apr |
| Occurrence of fatal police violence during pregnancy and hazard of preterm birth in California. | Goin, Dana E; Gomez, Anu Manchikanti; Farkas, Kriszta; Duarte, Catherine; Karasek, Deborah; Chambers, Brittany D; Jackson, Andrea V; Ahern, Jennifer | Paediatric and perinatal epidemiology | 33689194 | 2021 Mar 10 |
| In Vitro and in Vivo Analyses of the Effects of Source, Length, and Charge on the Cytotoxicity and Immunocompatibility of Cellulose Nanocrystals. | Weiss, Adam M; Macke, Nicholas; Zhang, Yefei; Calvino, Céline; Esser-Kahn, Aaron P; Rowan, Stuart J | ACS biomaterials science & engineering | 33689287 | 2021 04 12 |
| Enhancer grammar in development, evolution, and disease: dependencies and interplay. | Jindal, Granton A; Farley, Emma K | Developmental cell | 33689769 | 2021 03 08 |
| Interleukin-6 produced by enteric neurons regulates the number and phenotype of microbe-responsive regulatory T cells in the gut. | Yan, Yiqing; Ramanan, Deepshika; Rozenberg, Milena; McGovern, Kelly; Rastelli, Daniella; Vijaykumar, Brinda; Yaghi, Omar; Voisin, Tiphaine; Mosaheb, Munir; Chiu, Isaac; Itzkovitz, Shalev; Rao, Meenakshi; Mathis, Diane; Benoist, Christophe | Immunity | 33691135 | 2021 Mar 09 |
| The neural circuitry of social homeostasis: Consequences of acute versus chronic social isolation. | Lee, Christopher R; Chen, Alon; Tye, Kay M | Cell | 33691140 | 2021 Mar 18 |
| Editing GWAS: experimental approaches to dissect and exploit disease-associated genetic variation. | Rao, Shuquan; Yao, Yao; Bauer, Daniel E | Genome medicine | 33691767 | 2021 Mar 10 |
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| TIGER: inferring DNA replication timing from whole-genome sequence data. | Koren, Amnon; Massey, Dashiell J; Bracci, Alexa N | Bioinformatics (Oxford, England) | 33704387 | 2021 Mar 11 |
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| Fate Mapping of Cancer Cells in Metastatic Lymph Nodes Using Photoconvertible Proteins. | Pereira, Ethel R; Kedrin, Dmitriy; Padera, Timothy P | Methods in molecular biology (Clifton, N.J.) | 33704727 | 2021 |
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| The double-edged sword of Tregs in M tuberculosis, M avium, and M absessus infection. | Verma, Deepshikha; Chan, Edward D; Ordway, Diane J | Immunological reviews | 33713043 | 2021 May |
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| Natural combinatorial genetics and prolific polyamine production enable siderophore diversification in Serratia plymuthica. | Cleto, Sara; Haslinger, Kristina; Prather, Kristala L J; Lu, Timothy K | BMC biology | 33722216 | 2021 03 15 |
| Molecular assemblies of the catalytic domain of SOS with KRas and oncogenic mutants. | Moghadamchargari, Zahra; Shirzadeh, Mehdi; Liu, Chang; Schrecke, Samantha; Packianathan, Charles; Russell, David H; Zhao, Minglei; Laganowsky, Arthur | Proceedings of the National Academy of Sciences of the United States of America | 33723061 | 2021 Mar 23 |
| Harnessing the power of directed evolution to improve genome editing systems. | Su, Qiwen; Zhou, Mi; Cheng, Cristina; Niu, Jia | Current opinion in chemical biology | 33725650 | 2021 Mar 13 |
| Surface Proteomics Reveals CD72 as a Target for In Vitro-Evolved Nanobody-Based CAR-T Cells in KMT2A/MLL1-Rearranged B-ALL. | Nix, Matthew A; Mandal, Kamal; Geng, Huimin; Paranjape, Neha; Lin, Yu-Hsiu T; Rivera, Jose M; Marcoulis, Makeba; White, Kristie L; Whitman, Jeffrey D; Bapat, Sagar P; Parker, Kevin R; Ramirez, Jonathan; Deucher, Anne; Phojanokong, Paul; Steri, Veronica; Fattahi, Faranak; Hann, Byron C; Satpathy, Ansuman T; Manglik, Aashish; Stieglitz, Elliot; Wiita, Arun P | Cancer discovery | 33727310 | 2021 Aug |
| Mechanotransduction in gastrointestinal smooth muscle cells: role of mechanosensitive ion channels. | Joshi, Vikram; Strege, Peter R; Farrugia, Gianrico; Beyder, Arthur | American journal of physiology. Gastrointestinal and liver physiology | 33729004 | 2021 May 01 |
| Early Seizures Are Predictive of Worse Health-Related Quality of Life at Follow-Up After Intracerebral Hemorrhage. | Naidech, Andrew M; Weaver, Bradley; Maas, Matthew; Bleck, Thomas P; VanHaerents, Stephen; Schuele, Stephan U | Critical care medicine | 33729725 | 2021 Jun 01 |
| H3K27ac bookmarking promotes rapid post-mitotic activation of the pluripotent stem cell program without impacting 3D chromatin reorganization. | Pelham-Webb, Bobbie; Polyzos, Alexander; Wojenski, Luke; Kloetgen, Andreas; Li, Jiexi; Di Giammartino, Dafne Campigli; Sakellaropoulos, Theodore; Tsirigos, Aristotelis; Core, Leighton; Apostolou, Effie | Molecular cell | 33730542 | 2021 04 15 |
| Scribble sub-cellular localization modulates recruitment of YES1 to regulate YAP1 phosphorylation. | Zhao, Dongyu; Yin, Zhangyuan; Soellner, Matthew B; Martin, Brent R | Cell chemical biology | 33730553 | 2021 08 19 |
| Activation of GPR37 in macrophages confers protection against infection-induced sepsis and pain-like behaviour in mice. | Bang, Sangsu; Donnelly, Christopher R; Luo, Xin; Toro-Moreno, Maria; Tao, Xueshu; Wang, Zilong; Chandra, Sharat; Bortsov, Andrey V; Derbyshire, Emily R; Ji, Ru-Rong | Nature communications | 33731716 | 2021 03 17 |
| The association of genetic polymorphisms with neuroconnectivity in breast cancer patients. | Harrison, Rebecca A; Rao, Vikram; Kesler, Shelli R | Scientific reports | 33731765 | 2021 03 17 |
| Author Correction: Transcription factor competition at the γ-globin promoters controls hemoglobin switching. | Liu, Nan; Xu, Shuqian; Yao, Qiuming; Zhu, Qian; Kai, Yan; Hsu, Jonathan Y; Sakon, Phraew; Pinello, Luca; Yuan, Guo-Cheng; Bauer, Daniel E; Orkin, Stuart H | Nature genetics | 33731942 | 2021 Apr |
| Optimal individualized decision rules using instrumental variable methods. | Qiu, Hongxiang; Carone, Marco; Sadikova, Ekaterina; Petukhova, Maria; Kessler, Ronald C; Luedtke, Alex | Journal of the American Statistical Association | 33731969 | 2021 |
| Development and dissemination of infectious disease dynamic transmission models during the COVID-19 pandemic: what can we learn from other pathogens and how can we move forward? | Becker, Alexander D; Grantz, Kyra H; Hegde, Sonia T; Bérubé, Sophie; Cummings, Derek A T; Wesolowski, Amy | The Lancet. Digital health | 33735068 | 2021 01 |
| Associations of firearm dealer openings with firearm self-harm deaths and injuries: A differences-in-differences analysis. | Matthay, Ellicott C; Farkas, Kriszta; Goin, Dana E; Rudolph, Kara E; Pear, Veronica A; Ahern, Jennifer | PloS one | 33735181 | 2021 |
| Noradrenergic Signaling Disengages Feedforward Transmission in the Nucleus Accumbens Shell. | Manz, Kevin M; Coleman, Benjamin C; Grueter, Carrie A; Shields, Brenda C; Tadross, Michael R; Grueter, Brad A | The Journal of neuroscience : the official journal of the Society for Neuroscience | 33737458 | 2021 04 28 |
| Energy-efficient Mott activation neuron for full-hardware implementation of neural networks. | Oh, Sangheon; Shi, Yuhan; Del Valle, Javier; Salev, Pavel; Lu, Yichen; Huang, Zhisheng; Kalcheim, Yoav; Schuller, Ivan K; Kuzum, Duygu | Nature nanotechnology | 33737724 | 2021 06 |
| Single-molecule imaging reveals that Z-ring condensation is essential for cell division in Bacillus subtilis. | Squyres, Georgia R; Holmes, Matthew J; Barger, Sarah R; Pennycook, Betheney R; Ryan, Joel; Yan, Victoria T; Garner, Ethan C | Nature microbiology | 33737746 | 2021 May |
| The shape of pleomorphic virions determines resistance to cell-entry pressure. | Li, Tian; Li, Zhenyu; Deans, Erin E; Mittler, Eva; Liu, Meisui; Chandran, Kartik; Ivanovic, Tijana | Nature microbiology | 33737748 | 2021 05 |
| Nanotransfection-based vasculogenic cell reprogramming drives functional recovery in a mouse model of ischemic stroke. | Lemmerman, Luke R; Balch, Maria H H; Moore, Jordan T; Alzate-Correa, Diego; Rincon-Benavides, Maria A; Salazar-Puerta, Ana; Gnyawali, Surya; Harris, Hallie N; Lawrence, William; Ortega-Pineda, Lilibeth; Wilch, Lauren; Risser, Ian B; Maxwell, Aidan J; Duarte-Sanmiguel, Silvia; Dodd, Daniel; Guio-Vega, Gina P; McTigue, Dana M; Arnold, W David; Nimjee, Shahid M; Sen, Chandan K; Khanna, Savita; Rink, Cameron; Higuita-Castro, Natalia; Gallego-Perez, Daniel | Science advances | 33741587 | 2021 Mar |
| Spatiotemporal single-cell RNA sequencing of developing chicken hearts identifies interplay between cellular differentiation and morphogenesis. | Mantri, Madhav; Scuderi, Gaetano J; Abedini-Nassab, Roozbeh; Wang, Michael F Z; McKellar, David; Shi, Hao; Grodner, Benjamin; Butcher, Jonathan T; De Vlaminck, Iwijn | Nature communications | 33741943 | 2021 03 19 |
| Brain-Computer Interfaces in Neurorecovery and Neurorehabilitation. | Young, Michael J; Lin, David J; Hochberg, Leigh R | Seminars in neurology | 33742433 | 2021 04 |
| Meiotic regulation of the Ndc80 complex composition and function. | Chen, Jingxun; Ünal, Elçin | Current genetics | 33745061 | 2021 Aug |
| Microscale Physiological Events on the Human Cortical Surface. | Paulk, Angelique C; Yang, Jimmy C; Cleary, Daniel R; Soper, Daniel J; Halgren, Milan; O'Donnell, Alexandra R; Lee, Sang Heon; Ganji, Mehran; Ro, Yun Goo; Oh, Hongseok; Hossain, Lorraine; Lee, Jihwan; Tchoe, Youngbin; Rogers, Nicholas; Kiliç, Kivilcim; Ryu, Sang Baek; Lee, Seung Woo; Hermiz, John; Gilja, Vikash; Ulbert, István; Fabó, Daniel; Thesen, Thomas; Doyle, Werner K; Devinsky, Orrin; Madsen, Joseph R; Schomer, Donald L; Eskandar, Emad N; Lee, Jong Woo; Maus, Douglas; Devor, Anna; Fried, Shelley I; Jones, Pamela S; Nahed, Brian V; Ben-Haim, Sharona; Bick, Sarah K; Richardson, Robert Mark; Raslan, Ahmed M; Siler, Dominic A; Cahill, Daniel P; Williams, Ziv M; Cosgrove, G Rees; Dayeh, Shadi A; Cash, Sydney S | Cerebral cortex (New York, N.Y. : 1991) | 33749727 | 2021 Jul 05 |
| Thirteen Questions About Using Machine Learning in Causal Research (You Won't Believe the Answer to Number 10!). | Mooney, Stephen J; Keil, Alexander P; Westreich, Daniel J | American journal of epidemiology | 33751024 | 2021 08 01 |
| COVID-19 Gastrointestinal Symptoms and Attenuation of the Immune Response to SARS-CoV-2. | Miller, Jonathan; Yan, Kelley S | Gastroenterology | 33753106 | 2021 06 |
| Videogame intervention to increase advance care planning conversations by hospitalists with older adults: study protocol for a stepped-wedge clinical trial. | Mohan, D; O'Malley, A James; Chelen, Julia; MacMartin, Meredith; Murphy, Megan; Rudolph, Mark; Barnato, Amber | BMJ open | 33753443 | 2021 Mar 22 |
| The CysLT2R receptor mediates leukotriene C4-driven acute and chronic itch. | Voisin, Tiphaine; Perner, Caroline; Messou, Marie-Angele; Shiers, Stephanie; Ualiyeva, Saltanat; Kanaoka, Yoshihide; Price, Theodore J; Sokol, Caroline L; Bankova, Lora G; Austen, K Frank; Chiu, Isaac M | Proceedings of the National Academy of Sciences of the United States of America | 33753496 | 2021 Mar 30 |
| Reconstructing unseen transmission events to infer dengue dynamics from viral sequences. | Salje, Henrik; Wesolowski, Amy; Brown, Tyler S; Kiang, Mathew V; Berry, Irina Maljkovic; Lefrancq, Noemie; Fernandez, Stefan; Jarman, Richard G; Ruchusatsawat, Kriangsak; Iamsirithaworn, Sopon; Vandepitte, Warunee P; Suntarattiwong, Piyarat; Read, Jonatha | Nature communications | 33753725 | 2021 03 22 |
| Lineage tracing and analog recording in mammalian cells by single-site DNA writing. | Loveless, Theresa B; Grotts, Joseph H; Schechter, Mason W; Forouzmand, Elmira; Carlson, Courtney K; Agahi, Bijan S; Liang, Guohao; Ficht, Michelle; Liu, Beide; Xie, Xiaohui; Liu, Chang C | Nature chemical biology | 33753928 | 2021 06 |
| A genome-scale CRISPR interference guide library enables comprehensive phenotypic profiling in yeast. | McGlincy, Nicholas J; Meacham, Zuriah A; Reynaud, Kendra K; Muller, Ryan; Baum, Rachel; Ingolia, Nicholas T | BMC genomics | 33757429 | 2021 Mar 23 |
| Impact of close interpersonal contact on COVID-19 incidence: evidence from one year of mobile device data. | Crawford, Forrest W; Jones, Sydney A; Cartter, Matthew; Dean, Samantha G; Warren, Joshua L; Li, Zehang Richard; Barbieri, Jacqueline; Campbell, Jared; Kenney, Patrick; Valleau, Thomas; Morozova, Olga | medRxiv : the preprint server for health sciences | 33758869 | 2021 Mar 12 |
| Label-Free Ultrasensitive Detection of Abnormal Chiral Metabolites in Diabetes. | Liu, Yaoran; Wu, Zilong; Kollipara, Pavana Siddhartha; Montellano, Richard; Sharma, Kumar; Zheng, Yuebing | ACS nano | 33760602 | 2021 04 27 |
| Gold Nanorod-Melanin Hybrids for Enhanced and Prolonged Photoacoustic Imaging in the Near-Infrared-II Window. | Yim, Wonjun; Zhou, Jiajing; Mantri, Yash; Creyer, Matthew N; Moore, Colman A; Jokerst, Jesse V | ACS applied materials & interfaces | 33761255 | 2021 Apr 07 |
| The Intersection of Work and Home Challenges Faced by Physician Mothers During the Coronavirus Disease 2019 Pandemic: A Mixed-Methods Analysis. | Halley, Meghan C; Mathews, Kusum S; Diamond, Lisa C; Linos, Elizabeth; Sarkar, Urmimala; Mangurian, Christina; Sabry, Hala; Goyal, Monika K; Olazo, Kristan; Miller, Emily G; Jagsi, Reshma; Linos, Eleni | Journal of women's health (2002) | 33761277 | 2021 04 |
| Positive Controls in Adults and Children Support That Very Few, If Any, New Neurons Are Born in the Adult Human Hippocampus. | Sorrells, Shawn F; Paredes, Mercedes F; Zhang, Zhuangzhi; Kang, Gugene; Pastor-Alonso, Oier; Biagiotti, Sean; Page, Chloe E; Sandoval, Kadellyn; Knox, Anthony; Connolly, Andrew; Huang, Eric J; Garcia-Verdugo, Jose Manuel; Oldham, Michael C; Yang, Zhengang; Alvarez-Buylla, Arturo | The Journal of neuroscience : the official journal of the Society for Neuroscience | 33762407 | 2021 03 24 |
| Increasing proteomics throughput. | Slavov, Nikolai | Nature biotechnology | 33767394 | 2021 Mar 25 |
| Targeting acetate metabolism: Achilles' nightmare. | Miller, Katelyn D; Schug, Zachary T | British journal of cancer | 33767420 | 2021 Mar 25 |
| Extracellular cGAMP is a cancer cell-produced immunotransmitter involved in radiation-induced anti-cancer immunity. | Carozza, Jacqueline A; Böhnert, Volker; Nguyen, Khanh C; Skariah, Gemini; Shaw, Kelsey E; Brown, Jenifer A; Rafat, Marjan; von Eyben, Rie; Graves, Edward E; Glenn, Jeffrey S; Smith, Mark; Li, Lingyin | Nature cancer | 33768207 | 2020 02 |
| Kinetic sequencing (k-Seq) as a massively parallel assay for ribozyme kinetics: utility and critical parameters. | Shen, Yuning; Pressman, Abe; Janzen, Evan; Chen, Irene A | Nucleic acids research | 33772580 | 2021 07 09 |
| Oral delivery of peptide therapeutics in infants: Challenges and opportunities. | Gleeson, John P; Fein, Katherine C; Whitehead, Kathryn A | Advanced drug delivery reviews | 33774115 | 2021 06 |
| FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices. | Lerner, Eitan; Barth, Anders; Hendrix, Jelle; Ambrose, Benjamin; Birkedal, Victoria; Blanchard, Scott C; Börner, Richard; Sung Chung, Hoi; Cordes, Thorben; Craggs, Timothy D; Deniz, Ashok A; Diao, Jiajie; Fei, Jingyi; Gonzalez, Ruben L; Gopich, Irina V; Ha, Taekjip; Hanke, Christian A; Haran, Gilad; Hatzakis, Nikos S; Hohng, Sungchul; Hong, Seok-Cheol; Hugel, Thorsten; Ingargiola, Antonino; Joo, Chirlmin; Kapanidis, Achillefs N; Kim, Harold D; Laurence, Ted; Lee, Nam Ki; Lee, Tae-Hee; Lemke, Edward A; Margeat, Emmanuel; Michaelis, Jens; Michalet, Xavier; Myong, Sua; Nettels, Daniel; Peulen, Thomas-Otavio; Ploetz, Evelyn; Razvag, Yair; Robb, Nicole C; Schuler, Benjamin; Soleimaninejad, Hamid; Tang, Chun; Vafabakhsh, Reza; Lamb, Don C; Seidel, Claus Am; Weiss, Shimon | eLife | 33779550 | 2021 03 29 |
| Regulation of nonsense-mediated mRNA decay in neural development and disease. | Lee, Paul Jongseo; Yang, Suzhou; Sun, Yu; Guo, Junjie U | Journal of molecular cell biology | 33783512 | 2021 Aug 04 |
| Precise regulation of the relative rates of surface area and volume synthesis in bacterial cells growing in dynamic environments. | Shi, Handuo; Hu, Yan; Odermatt, Pascal D; Gonzalez, Carlos G; Zhang, Lichao; Elias, Joshua E; Chang, Fred; Huang, Kerwyn Casey | Nature communications | 33785742 | 2021 03 30 |
| Sorting sub-150-nm liposomes of distinct sizes by DNA-brick-assisted centrifugation. | Yang, Yang; Wu, Zhenyong; Wang, Laurie; Zhou, Kaifeng; Xia, Kai; Xiong, Qiancheng; Liu, Longfei; Zhang, Zhao; Chapman, Edwin R; Xiong, Yong; Melia, Thomas J; Karatekin, Erdem; Gu, Hongzhou; Lin, Chenxiang | Nature chemistry | 33785892 | 2021 Mar 30 |
| MTSplice predicts effects of genetic variants on tissue-specific splicing. | Cheng, Jun; Çelik, Muhammed Hasan; Kundaje, Anshul; Gagneur, Julien | Genome biology | 33789710 | 2021 03 31 |
| The Impact of Vaccination to Control COVID-19 Burden in the United States: A Simulation Modeling Approach. | Alagoz, Oguzhan; Sethi, Ajay K; Patterson, Brian W; Churpek, Matthew; Alhanaee, Ghalib; Scaria, Elizabeth; Safdar, Nasia | medRxiv : the preprint server for health sciences | 33791738 | 2021 Mar 31 |
| Hypertension: Do Inflammation and Immunity Hold the Key to Solving this Epidemic? | Madhur, Meena S; Elijovich, Fernando; Alexander, Matthew R; Pitzer, Ashley; Ishimwe, Jeanne; Van Beusecum, Justin P; Patrick, David M; Smart, Charles D; Kleyman, Thomas R; Kingery, Justin; Peck, Robert N; Laffer, Cheryl L; Kirabo, Annet | Circulation research | 33793336 | 2021 Apr 02 |
| Compact and adjustable compensator for AOD spatial and temporal dispersion using off-the-shelf components. | Yamaguchi, Akihiro; Karagyozov, Doycho; Gershow, Marc H | Optics letters | 33793507 | 2021 Apr 01 |
| Microbes and pain. | Deng, Liwen; Chiu, Isaac M | PLoS pathogens | 33793668 | 2021 Apr |
| Motion-compensated noninvasive periodontal health monitoring using handheld and motor-based photoacoustic-ultrasound imaging systems. | Mozaffarzadeh, Moein; Moore, Colman; Golmoghani, Erfan Barzegar; Mantri, Yash; Hariri, Ali; Jorns, Alec; Fu, Lei; Verweij, Martin D; Orooji, Mahdi; de Jong, Nico; Jokerst, Jesse V | Biomedical optics express | 33796371 | 2021 Mar 01 |
| Membrane Barrels Are Taller, Fatter, Inside-Out Soluble Barrels. | Dhar, Rik; Feehan, Ryan; Slusky, Joanna S G | The journal of physical chemistry. B | 33797916 | 2021 04 15 |
| Nonequilibrium Green's Functions for Functional Connectivity in the Brain. | Randi, Francesco; Leifer, Andrew M | Physical review letters | 33798383 | 2021 Mar 19 |
| Centriole-less pericentriolar material serves as a microtubule organizing center at the base of C. elegans sensory cilia. | Magescas, Jérémy; Eskinazi, Sani; Tran, Michael V; Feldman, Jessica L | Current biology : CB | 33798428 | 2021 Jun 07 |
| Expansion microscopy: A powerful nanoscale imaging tool for neuroscientists. | Gallagher, Brendan R; Zhao, Yongxin | Neurobiology of disease | 33813047 | 2021 07 |
| Racial and ethnic comparison of ecological risk factors and youth outcomes: A test of the desensitization hypothesis. | Chen, Pan; Voisin, Dexter R; Marotta, Phillip L; Jacobson, Kristen C | Journal of child and family studies | 33814876 | 2020 Oct |
| An Esrrb and Nanog Cell Fate Regulatory Module Controlled by Feed Forward Loop Interactions. | Sevilla, Ana; Papatsenko, Dimitri; Mazloom, Amin R; Xu, Huilei; Vasileva, Ana; Unwin, Richard D; LeRoy, Gary; Chen, Edward Y; Garrett-Bakelman, Francine E; Lee, Dung-Fang; Trinite, Benjamin; Webb, Ryan L; Wang, Zichen; Su, Jie; Gingold, Julian; Melnick, Ari; Garcia, Benjamin A; Whetton, Anthony D; MacArthur, Ben D; Ma'ayan, Avi; Lemischka, Ihor R | Frontiers in cell and developmental biology | 33816475 | 2021 |
| Biophysical and epigenetic regulation of cancer stemness, invasiveness and immune action. | Veerasubramanian, Praveen Krishna; Trinh, Annie; Akhtar, Navied; Liu, Wendy F; Downing, Timothy L | Current tissue microenvironment reports | 33817661 | 2020 Dec |
| Accuracy of Practitioner Estimates of Probability of Diagnosis Before and After Testing. | Morgan, Daniel J; Pineles, Lisa; Owczarzak, Jill; Magder, Larry; Scherer, Laura; Brown, Jessica P; Pfeiffer, Chris; Terndrup, Chris; Leykum, Luci; Feldstein, David; Foy, Andrew; Stevens, Deborah; Koch, Christina; Masnick, Max; Weisenberg, Scott; Korenstein, Deborah | JAMA internal medicine | 33818595 | 2021 Jun 01 |
| Mass-tag barcoding for multiplexed analysis of human synaptosomes and other anuclear events. | Gajera, Chandresh R; Fernandez, Rosemary; Montine, Kathleen S; Fox, Edward J; Mrdjen, Dunja; Postupna, Nadia O; Keene, Christopher Dirk; Bendall, Sean C; Montine, Thomas J | Cytometry. Part A : the journal of the International Society for Analytical Cytology | 33818911 | 2021 Apr 05 |
| Hydrogel-based biocontainment of bacteria for continuous sensing and computation. | Tang, Tzu-Chieh; Tham, Eléonore; Liu, Xinyue; Yehl, Kevin; Rovner, Alexis J; Yuk, Hyunwoo; de la Fuente-Nunez, Cesar; Isaacs, Farren J; Zhao, Xuanhe; Lu, Timothy K | Nature chemical biology | 33820990 | 2021 06 |
| Rotational dynamics reduce interference between sensory and memory representations. | Libby, Alexandra; Buschman, Timothy J | Nature neuroscience | 33821001 | 2021 May |
| Reply to Fakih and Advani. | Trautner, Barbara W; Morgan, Daniel J | Clinical infectious diseases : an official publication of the Infectious Diseases Society of America | 33821997 | 2021 05 04 |
| Infants' neural speech discrimination predicts individual differences in grammar ability at 6 years of age and their risk of developing speech-language disorders. | Zhao, T Christina; Boorom, Olivia; Kuhl, Patricia K; Gordon, Reyna | Developmental cognitive neuroscience | 33823366 | 2021 04 |
| Spatial integration during active tactile sensation drives orientation perception. | Brown, Jennifer; Oldenburg, Ian Antón; Telian, Gregory I; Griffin, Sandon; Voges, Mieke; Jain, Vedant; Adesnik, Hillel | Neuron | 33826906 | 2021 05 19 |
| Integrated genomic analysis reveals key features of long undecoded transcript isoform-based gene repression. | Tresenrider, Amy; Morse, Kaitlin; Jorgensen, Victoria; Chia, Minghao; Liao, Hanna; van Werven, Folkert Jacobus; Ünal, Elçin | Molecular cell | 33826921 | 2021 05 20 |
| Precision medicine for mood disorders: objective assessment, risk prediction, pharmacogenomics, and repurposed drugs. | Le-Niculescu, H; Roseberry, K; Gill, S S; Levey, D F; Phalen, P L; Mullen, J; Williams, A; Bhairo, S; Voegtline, T; Davis, H; Shekhar, A; Kurian, S M; Niculescu, A B | Molecular psychiatry | 33828235 | 2021 Jul |
| The NIH Somatic Cell Genome Editing program. | Saha, Krishanu; Sontheimer, Erik J; Brooks, P J; Dwinell, Melinda R; Gersbach, Charles A; Liu, David R; Murray, Stephen A; Tsai, Shengdar Q; Wilson, Ross C; Anderson, Daniel G; Asokan, Aravind; Banfield, Jillian F; Bankiewicz, Krystof S; Bao, Gang; Bulte, Jeff W M; Bursac, Nenad; Campbell, Jarryd M; Carlson, Daniel F; Chaikof, Elliot L; Chen, Zheng-Yi; Cheng, R Holland; Clark, Karl J; Curiel, David T; Dahlman, James E; Deverman, Benjamin E; Dickinson, Mary E; Doudna, Jennifer A; Ekker, Stephen C; Emborg, Marina E; Feng, Guoping; Freedman, Benjamin S; Gamm, David M; Gao, Guangping; Ghiran, Ionita C; Glazer, Peter M; Gong, Shaoqin; Heaney, Jason D; Hennebold, Jon D; Hinson, John T; Khvorova, Anastasia; Kiani, Samira; Lagor, William R; Lam, Kit S; Leong, Kam W; Levine, Jon E; Lewis, Jennifer A; Lutz, Cathleen M; Ly, Danith H; Maragh, Samantha; McCray Jr, Paul B; McDevitt, Todd C; Mirochnitchenko, Oleg; Morizane, Ryuji; Murthy, Niren; Prather, Randall S; Ronald, John A; Roy, Subhojit; Roy, Sushmita; Sabbisetti, Venkata; Saltzman, W Mark; Santangelo, Philip J; Segal, David J; Shimoyama, Mary; Skala, Melissa C; Tarantal, Alice F; Tilton, John C; Truskey, George A; Vandsburger, Moriel; Watts, Jonathan K; Wells, Kevin D; Wolfe, Scot A; Xu, Qiaobing; Xue, Wen; Yi, Guohua; Zhou, Jiangbing; SCGE Consortium | Nature | 33828315 | 2021 Apr |
| Combining High Sensitivity and Dynamic Range: Wearable Thin-Film Composite Strain Sensors of Graphene, Ultrathin Palladium, and PEDOT:PSS. | Ramírez, Julian; Rodriquez, Daniel; Urbina, Armando; Cardenas, Anne; Lipomi, Darren J | ACS applied nano materials | 33829151 | 2019 Apr 26 |
| Bioorthogonal Retro-Cope Elimination Reaction of N,N-Dialkylhydroxylamines and Strained Alkynes. | Kang, Dahye; Kim, Justin | Journal of the American Chemical Society | 33829777 | 2021 04 21 |
| Incident obstructive lung disease and mortality among people with HIV and a history of injecting drugs. | Kalmin, Mariah M; Westreich, Daniel; Drummond, Bradley M; Sun, Jing; Mehta, Shruti H; Kirk, Gregory D | AIDS (London, England) | 33831913 | 2021 07 15 |
| Toward photoswitchable electronic pre-resonance stimulated Raman probes. | Lee, Dongkwan; Qian, Chenxi; Wang, Haomin; Li, Lei; Miao, Kun; Du, Jiajun; Shcherbakova, Daria M; Verkhusha, Vladislav V; Wang, Lihong V; Wei, Lu | The Journal of chemical physics | 33832245 | 2021 Apr 07 |
| Optogenetic Amplification Circuits for Light-Induced Metabolic Control. | Zhao, Evan M; Lalwani, Makoto A; Chen, Jhong-Min; Orillac, Paulina; Toettcher, Jared E; Avalos, José L | ACS synthetic biology | 33835777 | 2021 05 21 |
| Improved prime editors enable pathogenic allele correction and cancer modelling in adult mice. | Liu, Pengpeng; Liang, Shun-Qing; Zheng, Chunwei; Mintzer, Esther; Zhao, Yan G; Ponnienselvan, Karthikeyan; Mir, Aamir; Sontheimer, Erik J; Gao, Guangping; Flotte, Terence R; Wolfe, Scot A; Xue, Wen | Nature communications | 33837189 | 2021 04 09 |
| Directional Modulation of Exciton Emission Using Single Dielectric Nanospheres. | Fang, Jie; Wang, Mingsong; Yao, Kan; Zhang, Tianyi; Krasnok, Alex; Jiang, Taizhi; Choi, Junho; Kahn, Ethan; Korgel, Brian A; Terrones, Mauricio; Li, Xiaoqin; Alù, Andrea; Zheng, Yuebing | Advanced materials (Deerfield Beach, Fla.) | 33837615 | 2021 May |
| Genome-wide programmable transcriptional memory by CRISPR-based epigenome editing. | Nuñez, James K; Chen, Jin; Pommier, Greg C; Cogan, J Zachery; Replogle, Joseph M; Adriaens, Carmen; Ramadoss, Gokul N; Shi, Quanming; Hung, King L; Samelson, Avi J; Pogson, Angela N; Kim, James Y S; Chung, Amanda; Leonetti, Manuel D; Chang, Howard Y; Kampmann, Martin; Bernstein, Bradley E; Hovestadt, Volker; Gilbert, Luke A; Weissman, Jonathan S | Cell | 33838111 | 2021 04 29 |
| Optimized iLID Membrane Anchors for Local Optogenetic Protein Recruitment. | Natwick, Dean E; Collins, Sean R | ACS synthetic biology | 33843200 | 2021 05 21 |
| Cardiac afferent signaling partially underlies premature ventricular contraction-induced cardiomyopathy. | Hori, Yuichi; Temma, Taro; Wooten, Christian; Sobowale, Christopher; Chan, Christopher; Swid, Mohammed; Ajijola, Olujimi A | Heart rhythm | 33845214 | 2021 09 |
| Learning cis-regulatory principles of ADAR-based RNA editing from CRISPR-mediated mutagenesis. | Liu, Xin; Sun, Tao; Shcherbina, Anna; Li, Qin; Jarmoskaite, Inga; Kappel, Kalli; Ramaswami, Gokul; Das, Rhiju; Kundaje, Anshul; Li, Jin Billy | Nature communications | 33846332 | 2021 04 12 |
| Uncovering transcriptional dark matter via gene annotation independent single-cell RNA sequencing analysis. | Wang, Michael F Z; Mantri, Madhav; Chou, Shao-Pei; Scuderi, Gaetano J; McKellar, David W; Butcher, Jonathan T; Danko, Charles G; De Vlaminck, Iwijn | Nature communications | 33846360 | 2021 04 12 |
| Examining horizontal gene transfer in microbial communities. | Brito, Ilana Lauren | Nature reviews. Microbiology | 33846600 | 2021 07 |
| Genome-wide screens uncover KDM2B as a modifier of protein binding to heparan sulfate. | Weiss, Ryan J; Spahn, Philipp N; Chiang, Austin W T; Liu, Qing; Li, Jing; Hamill, Kristina M; Rother, Sandra; Clausen, Thomas M; Hoeksema, Marten A; Timm, Bryce M; Godula, Kamil; Glass, Christopher K; Tor, Yitzhak; Gordts, Philip L S M; Lewis, Nathan E; Esko, Jeffrey D | Nature chemical biology | 33846619 | 2021 Apr 12 |
| Development and maintenance of vision's first synapse. | Burger, Courtney A; Jiang, Danye; Mackin, Robert D; Samuel, Melanie A | Developmental biology | 33848537 | 2021 08 |
| Age and social experience induced plasticity across brain regions of the paper wasp Polistes fuscatus. | Jernigan, Christopher M; Zaba, Natalie C; Sheehan, Michael J | Biology letters | 33849349 | 2021 04 |
| Antibody affinity as a driver of signal generation in a paper-based immunoassay for Ebola virus surveillance. | Murray, Lara P; Govindan, Ramesh; Mora, Andrea C; Munro, James B; Mace, Charles R | Analytical and bioanalytical chemistry | 33852053 | 2021 Apr 14 |
| Alternative splicing is a developmental switch for hTERT expression. | Penev, Alex; Bazley, Andrew; Shen, Michael; Boeke, Jef D; Savage, Sharon A; Sfeir, Agnel | Molecular cell | 33852895 | 2021 Jun 03 |
| Diagnosis, Education, and Care of Patients with APOL1-Associated Nephropathy: A Delphi Consensus and Systematic Review. | Freedman, Barry I; Burke, Wylie; Divers, Jasmin; Eberhard, Lucy; Gadegbeku, Crystal A; Gbadegesin, Rasheed; Hall, Michael E; Jones-Smith, Tiffany; Knight, Richard; Kopp, Jeffrey B; Kovesdy, Csaba P; Norris, Keith C; Olabisi, Opeyemi A; Roberts, Glenda V; Sedor, John R; Blacksher, Erika | Journal of the American Society of Nephrology : JASN | 33853887 | 2021 Jul |
| Social networks and neural receptivity to persuasive health messages. | Pandey, Prateekshit; Kang, Yoona; Cooper, Nicole; O'Donnell, Matthew B; Falk, Emily B | Health psychology : official journal of the Division of Health Psychology, American Psychological Association | 33856834 | 2021 Apr |
| Dynamic post-transcriptional regulation by Mrn1 links cell wall homeostasis to mitochondrial structure and function. | Reynaud, Kendra; Brothers, Molly; Ly, Michael; Ingolia, Nicholas T | PLoS genetics | 33857138 | 2021 Apr |
| Viral Sequencing to Investigate Sources of SARS-CoV-2 Infection in US Healthcare Personnel. | Braun, Katarina M; Moreno, Gage K; Buys, Ashley; Somsen, Elizabeth D; Bobholz, Max; Accola, Molly A; Anderson, Laura; Rehrauer, William M; Baker, David A; Safdar, Nasia; Lepak, Alexander J; O'Connor, David H; Friedrich, Thomas C | Clinical infectious diseases : an official publication of the Infectious Diseases Society of America | 33857303 | 2021 09 15 |
| The promises and challenges of archiving insect behavior and natural history in a changing world. | Sheehan, Michael J; Miller, Sara E | Current opinion in insect science | 33857642 | 2021 Apr 20 |
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| Gadolinium Doping Enhances the Photoacoustic Signal of Synthetic Melanin Nanoparticles: A Dual Modality Contrast Agent for Stem Cell Imaging. | Lemaster, Jeanne E; Wang, Zhao; Hariri, Ali; Chen, Fang; Hu, Ziying; Huang, Yuran; Barback, Christopher V; Cochran, Richard; Gianneschi, Nathan C; Jokerst, Jesse V | Chemistry of materials : a publication of the American Chemical Society | 33859455 | 2019 Jan 08 |
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| Protein aggregation and the evolution of stress resistance in clinical yeast. | Chen, Yiwen R; Ziv, Inbal; Swaminathan, Kavya; Elias, Joshua E; Jarosz, Daniel F | Philosophical transactions of the Royal Society of London. Series B, Biological sciences | 33866806 | 2021 Jun 07 |
| NK-Cell Biofactory as an Off-the-Shelf Cell-based Vector for Targeted In Situ Synthesis of Engineered Proteins. | Repellin, Claire E; Ssemadaali, Marvin A; Newmyer, Sherri; Radhakrishnan, Harikrishnan; Javitz, Harold S; Bhatnagar, Parijat | Advanced biology | 33871182 | 2021 Apr 19 |
| Population scale nucleic acid delivery to Caenorhabditis elegans via electroporation. | Khodakova, Anastasia S; Vilchis, Daniela Vidal; Blackburn, Dana; Amanor, Ferdinand; Samuel, Buck S | G3 (Bethesda, Md.) | 33872353 | 2021 Apr 19 |
| 3D Mapping Reveals a Complex and Transient Interstitial Matrix During Murine Kidney Development. | Lipp, Sarah N; Jacobson, Kathryn R; Hains, David S; Schwarderer, Andrew L; Calve, Sarah | Journal of the American Society of Nephrology : JASN | 33875569 | 2021 Apr 19 |
| Photocatalytic LPOR forms helical lattices that shape membranes for chlorophyll synthesis. | Nguyen, Henry C; Melo, Arthur A; Kruk, Jerzy; Frost, Adam; Gabruk, Michal | Nature plants | 33875834 | 2021 04 |
| Geometric deep learning enables 3D kinematic profiling across species and environments. | Dunn, Timothy W; Marshall, Jesse D; Severson, Kyle S; Aldarondo, Diego E; Hildebrand, David G C; Chettih, Selmaan N; Wang, William L; Gellis, Amanda J; Carlson, David E; Aronov, Dmitriy; Freiwald, Winrich A; Wang, Fan; Ölveczky, Bence P | Nature methods | 33875887 | 2021 05 |
| Multimodal neural recordings with Neuro-FITM uncover diverse patterns of cortical-hippocampal interactions. | Liu, Xin; Ren, Chi; Lu, Yichen; Liu, Yixiu; Kim, Jeong-Hoon; Leutgeb, Stefan; Komiyama, Takaki; Kuzum, Duygu | Nature neuroscience | 33875893 | 2021 Apr 19 |
| Tissue-specific parameters for the design of ECM-mimetic biomaterials. | Tonti, Olivia R; Larson, Hannah; Lipp, Sarah N; Luetkemeyer, Callan M; Makam, Megan; Vargas, Diego; Wilcox, Sean M; Calve, Sarah | Acta biomaterialia | 33878474 | 2021 09 15 |
| Integrative approach identifies SLC6A20 and CXCR6 as putative causal genes for the COVID-19 GWAS signal in the 3p21.31 locus. | Kasela, Silva; Daniloski, Zharko; Jordan, Tristan X; tenOever, Benjamin R; Sanjana, Neville E; Lappalainen, Tuuli | medRxiv : the preprint server for health sciences | 33880488 | 2021 Apr 13 |
| Enhancing subcutaneous injection and target tissue accumulation of nanoparticles via co-administration with macropinocytosis inhibitory nanoparticles (MiNP). | Stack, Trevor; Liu, Yugang; Frey, Molly; Bobbala, Sharan; Vincent, Michael; Scott, Evan | Nanoscale horizons | 33884386 | 2021 05 01 |
| California's Mental Health Services Act and Mortality Due to Suicide, Homicide, and Acute Effects of Alcohol: A Synthetic Control Application. | Zimmerman, Scott C; Matthay, Ellicott C; Rudolph, Kara E; Goin, Dana E; Farkas, Kriszta; Rowe, Christopher L; Ahern, Jennifer | American journal of epidemiology | 33884408 | 2021 10 01 |
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| Protocol for rapid assessment of the efficacy of novel Wnt inhibitors using zebrafish models. | Haney, Meghan G; Wimsett, Mary; Liu, Chunming; Blackburn, Jessica S | STAR protocols | 33889852 | 2021 Jun 18 |
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| miR-145 micelles mitigate atherosclerosis by modulating vascular smooth muscle cell phenotype. | Chin, Deborah D; Poon, Christopher; Wang, Jonathan; Joo, Johan; Ong, Victor; Jiang, Zhangjingyi; Cheng, Kayley; Plotkin, Anastasia; Magee, Gregory A; Chung, Eun Ji | Biomaterials | 33892346 | 2021 06 |
| Chromatin tracing and multiplexed imaging of nucleome architectures (MINA) and RNAs in single mammalian cells and tissue. | Liu, Miao; Yang, Bing; Hu, Mengwei; Radda, Jonathan S D; Chen, Yanbo; Jin, Shengyan; Cheng, Yubao; Wang, Siyuan | Nature protocols | 33903756 | 2021 May |
| Variable-Temperature Electrospray Ionization for Temperature-Dependent Folding/Refolding Reactions of Proteins and Ligand Binding. | McCabe, Jacob W; Shirzadeh, Mehdi; Walker, Thomas E; Lin, Cheng-Wei; Jones, Benjamin J; Wysocki, Vicki H; Barondeau, David P; Clemmer, David E; Laganowsky, Arthur; Russell, David H | Analytical chemistry | 33904705 | 2021 May 11 |
| DDX3 depletion represses translation of mRNAs with complex 5' UTRs. | Calviello, Lorenzo; Venkataramanan, Srivats; Rogowski, Karol J; Wyler, Emanuel; Wilkins, Kevin; Tejura, Malvika; Thai, Bao; Krol, Jacek; Filipowicz, Witold; Landthaler, Markus; Floor, Stephen N | Nucleic acids research | 33905506 | 2021 05 21 |
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| Short Diagnosis-to-Treatment Interval Is Associated With Higher Circulating Tumor DNA Levels in Diffuse Large B-Cell Lymphoma. | Alig, Stefan; Macaulay, Charles W; Kurtz, David M; Dührsen, Ulrich; Hüttmann, Andreas; Schmitz, Christine; Jin, Michael C; Sworder, Brian J; Garofalo, Andrea; Shahrokh Esfahani, Mohammad; Nabet, Barzin Y; Soo, Joanne; Scherer, Florian; Craig, Alexander F M; Casasnovas, Olivier; Westin, Jason R; Gaidano, Gianluca; Rossi, Davide; Roschewski, Mark; Wilson, Wyndham H; Meignan, Michel; Diehn, Maximilian; Alizadeh, Ash A | Journal of clinical oncology : official journal of the American Society of Clinical Oncology | 33909455 | 2021 Aug 10 |
| SynNotch CAR circuits enhance solid tumor recognition and promote persistent antitumor activity in mouse models. | Hyrenius-Wittsten, Axel; Su, Yang; Park, Minhee; Garcia, Julie M; Alavi, Josef; Perry, Nathaniel; Montgomery, Garrett; Liu, Bin; Roybal, Kole T | Science translational medicine | 33910981 | 2021 04 28 |
| Ribosome quality control activity potentiates vaccinia virus protein synthesis during infection. | Sundaramoorthy, Elayanambi; Ryan, Andrew P; Fulzele, Amit; Leonard, Marilyn; Daugherty, Matthew D; Bennett, Eric J | Journal of cell science | 33912921 | 2021 Apr 15 |
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| The human memory T cell compartment changes across tissues of the female reproductive tract. | Woodward Davis, Amanda S; Vick, Sarah C; Pattacini, Laura; Voillet, Valentin; Hughes, Sean M; Lentz, Gretchen M; Kirby, Anna C; Fialkow, Michael F; Gottardo, Raphael; Hladik, Florian; Lund, Jennifer M; Prlic, Martin | Mucosal immunology | 33953338 | 2021 Jul |
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| Therapeutically reprogrammed nutrient signalling enhances nanoparticulate albumin bound drug uptake and efficacy in KRAS-mutant cancer. | Li, Ran; Ng, Thomas S C; Wang, Stephanie J; Prytyskach, Mark; Rodell, Christopher B; Mikula, Hannes; Kohler, Rainer H; Garlin, Michelle A; Lauffenburger, Douglas A; Parangi, Sareh; Dinulescu, Daniela M; Bardeesy, Nabeel; Weissleder, Ralph; Miller, Miles A | Nature nanotechnology | 33958764 | 2021 May 06 |
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| Spatial control of gene expression in flies using bacterially derived binary transactivation systems. | Gamez, S; Vesga, L C; Mendez-Sanchez, S C; Akbari, O S | Insect molecular biology | 33963794 | 2021 10 |
| WNK1 is an assembly factor for the human ER membrane protein complex. | Pleiner, Tino; Hazu, Masami; Tomaleri, Giovani Pinton; Januszyk, Kurt; Oania, Robert S; Sweredoski, Michael J; Moradian, Annie; Guna, Alina; Voorhees, Rebecca M | Molecular cell | 33964204 | 2021 Jul 01 |
| Microfluidic formulation of nanoparticles for biomedical applications. | Shepherd, Sarah J; Issadore, David; Mitchell, Michael J | Biomaterials | 33965797 | 2021 07 |
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| Discovery of Candidate DNA Methylation Cancer Driver Genes. | Pan, Heng; Renaud, Loïc; Chaligne, Ronan; Bloehdorn, Johannes; Tausch, Eugen; Mertens, Daniel; Fink, Anna Maria; Fischer, Kirsten; Zhang, Chao; Betel, Doron; Gnirke, Andreas; Imielinski, Marcin; Moreaux, Jérôme; Hallek, Michael; Meissner, Alexander; Stilgenbauer, Stephan; Wu, Catherine J; Elemento, Olivier; Landau, Dan A | Cancer discovery | 33972312 | 2021 Sep |
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| An artificial intelligence that increases simulated brain-computer interface performance. | Olsen, Sebastian; Zhang, Jianwei; Liang, Ken-Fu; Lam, Michelle; Riaz, Usama; Kao, Jonathan C | Journal of neural engineering | 33978599 | 2021 05 13 |
| Pathogenic variants in SMARCA5, a chromatin remodeler, cause a range of syndromic neurodevelopmental features. | Li, Dong; Wang, Qin; Gong, Naihua N; Kurolap, Alina; Feldman, Hagit Baris; Boy, Nikolas; Brugger, Melanie; Grand, Katheryn; McWalter, Kirsty; Guillen Sacoto, Maria J; Wakeling, Emma; Hurst, Jane; March, Michael E; Bhoj, Elizabeth J; Nowaczyk, Małgorzata J M; Gonzaga-Jauregui, Claudia; Mathew, Mariam; Dava-Wala, Ashita; Siemon, Amy; Bartholomew, Dennis; Huang, Yue; Lee, Hane; Martinez-Agosto, Julian A; Schwaibold, Eva M C; Brunet, Theresa; Choukair, Daniela; Pais, Lynn S; White, Susan M; Christodoulou, John; Brown, Dana; Lindstrom, Kristin; Grebe, Theresa; Tiosano, Dov; Kayser, Matthew S; Tan, Tiong Yang; Deardorff, Matthew A; Song, Yuanquan; Hakonarson, Hakon | Science advances | 33980485 | 2021 May |
| Single-PanIN-seq unveils that ARID1A deficiency promotes pancreatic tumorigenesis by attenuating KRAS-induced senescence. | Liu, Shou; Cao, Wenjian; Niu, Yichi; Luo, Jiayi; Zhao, Yanhua; Hu, Zhiying; Zong, Chenghang | eLife | 33983114 | 2021 05 13 |
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| Poverty, Deprivation, and Mortality Risk Among Women With HIV in the United States. | Edmonds, Andrew; Breskin, Alexander; Cole, Stephen R; Westreich, Daniel; Ramirez, Catalina; Cocohoba, Jennifer; Wingood, Gina; Cohen, Mardge H; Golub, Elizabeth T; Kassaye, Seble G; Metsch, Lisa R; Sharma, Anjali; Konkle-Parker, Deborah; Wilson, Tracey E; Adimora, Adaora A | Epidemiology (Cambridge, Mass.) | 34347686 | 2021 Nov 01 |
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| Soil Candidate Phyla Radiation Bacteria Encode Components of Aerobic Metabolism and Co-occur with Nanoarchaea in the Rare Biosphere of Rhizosphere Grassland Communities. | Nicolas, Alexa M; Jaffe, Alexander L; Nuccio, Erin E; Taga, Michiko E; Firestone, Mary K; Banfield, Jillian F | mSystems | 34402646 | 2021 Aug 31 |
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| Rhythm and timing as vulnerabilities in neurodevelopmental disorders. | Lense, Miriam D; Ladányi, Eniko; Rabinowitch, Tal-Chen; Trainor, Laurel; Gordon, Reyna | Philosophical transactions of the Royal Society of London. Series B, Biological sciences | 34420385 | 2021 10 11 |
| Linking the genomic signatures of human beat synchronization and learned song in birds. | Gordon, Reyna L; Ravignani, Andrea; Hyland Bruno, Julia; Robinson, Cristina M; Scartozzi, Alyssa; Embalabala, Rebecca; Niarchou, Maria; 23andMe Research Team; Cox, Nancy J; Creanza, Nicole | Philosophical transactions of the Royal Society of London. Series B, Biological sciences | 34420388 | 2021 10 11 |
| Integrative approach identifies SLC6A20 and CXCR6 as putative causal genes for the COVID-19 GWAS signal in the 3p21.31 locus. | Kasela, Silva; Daniloski, Zharko; Bollepalli, Sailalitha; Jordan, Tristan X; tenOever, Benjamin R; Sanjana, Neville E; Lappalainen, Tuuli | Genome biology | 34425859 | 2021 08 23 |
| Multigenerational epigenetic inheritance: Transmitting information across generations. | Burton, Nicholas O; Greer, Eric L | Seminars in cell & developmental biology | 34426067 | 2021 Aug 20 |
| SubTap, a Versatile 3D Printed Platform for Eavesdropping on Extracellular Interactions. | Birer-Williams, Caroline M C; Chu, Rosalie K; Anderton, Christopher R; Wright, Erik S | mSystems | 34427520 | 2021 Aug 31 |
| Fluorescent tagging of endogenous proteins with CRISPR/Cas9 in primary mouse neural stem cells. | Morrow, Christopher S; Porter, Tiaira J; Moore, Darcie L | STAR protocols | 34430917 | 2021 Sep 17 |
| Cellular origins and lineage relationships of the intestinal epithelium. | Capdevila, Claudia; Trifas, Maria; Miller, Jonathan; Anderson, Troy; Sims, Peter A; Yan, Kelley S | American journal of physiology. Gastrointestinal and liver physiology | 34431400 | 2021 Oct 01 |
| Primary Cytotoxic T Cell Lymphomas Harbor Recurrent Targetable Alterations in the JAK-STAT Pathway. | Lee, Katie; Evans, Mark G; Yang, Lei; Ng, Spencer; Snowden, Caroline; Khodadoust, Michael S; Brown, Ryanne A; Trum, Nicholas Alexander; Querfeld, Christiane; Doan, Linda T; Song, Jinming; Zhang, Hailing; Gru, Alejandro; Wood, Gary S; Wada, David A; Shanmugam, Vignesh; Haun, Paul L; Aster, Jon C; Duncan, Lyn M; Guitart, Joan; Weinstock, David M; Nardi, Valentina; Choi, Jaehyuk | Blood | 34432866 | 2021 Aug 25 |
| ZEB1 promotes pathogenic Th1 and Th17 cell differentiation in multiple sclerosis. | Qian, Yuan; Arellano, Gabriel; Ifergan, Igal; Lin, Jean; Snowden, Caroline; Kim, Taehyeung; Thomas, Jane Joy; Law, Calvin; Guan, Tianxia; Balabanov, Roumen D; Kaech, Susan M; Miller, Stephen D; Choi, Jaehyuk | Cell reports | 34433042 | 2021 Aug 24 |
| Mesoscopic physiological interactions in the human brain reveal small-world properties. | Wang, Jiarui; Tao, Annabelle; Anderson, William S; Madsen, Joseph R; Kreiman, Gabriel | Cell reports | 34433053 | 2021 Aug 24 |
| First we eat, then we do everything else: The dynamic metabolic regulation of efferocytosis. | Trzeciak, Alissa; Wang, Ya-Ting; Perry, Justin Shaun Arnold | Cell metabolism | 34433074 | 2021 11 02 |
| mRNA vaccines for infectious diseases: principles, delivery and clinical translation. | Chaudhary, Namit; Weissman, Drew; Whitehead, Kathryn A | Nature reviews. Drug discovery | 34433919 | 2021 Aug 25 |
| Plasmonic Nanotweezers and Nanosensors for Point-of-Care Applications. | Peng, Xiaolei; Kotnala, Abhay; Rajeeva, Bharath Bangalore; Wang, Mingsong; Yao, Kan; Bhatt, Neel; Penley, Daniel; Zheng, Yuebing | Advanced optical materials | 34434691 | 2021 Jul 05 |
| Processing rhythm in speech and music: Shared mechanisms and implications for developmental speech and language disorders. | Fiveash, Anna; Bedoin, Nathalie; Gordon, Reyna L; Tillmann, Barbara | Neuropsychology | 34435803 | 2021 Nov |
| Expression of Foxp3 by T follicular helper cells in end-stage germinal centers. | Jacobsen, Johanne T; Hu, Wei; R Castro, Tiago B; Solem, Sigrid; Galante, Alice; Lin, Zeran; Allon, Samuel J; Mesin, Luka; Bilate, Angelina M; Schiepers, Ariën; Shalek, Alex K; Rudensky, Alexander Y; Victora, Gabriel D | Science (New York, N.Y.) | 34437125 | 2021 07 16 |
| Chromatin landscape signals differentially dictate the activities of mSWI/SNF family complexes. | Mashtalir, Nazar; Dao, Hai T; Sankar, Akshay; Liu, Hengyuan; Corin, Aaron J; Bagert, John D; Ge, Eva J; D'Avino, Andrew R; Filipovski, Martin; Michel, Brittany C; Dann, Geoffrey P; Muir, Tom W; Kadoch, Cigall | Science (New York, N.Y.) | 34437148 | 2021 07 16 |
| Neural representations of space in the hippocampus of a food-caching bird. | Payne, H L; Lynch, G F; Aronov, D | Science (New York, N.Y.) | 34437154 | 2021 07 16 |
| OCT4 cooperates with distinct ATP-dependent chromatin remodelers in naïve and primed pluripotent states in human. | Huang, Xin; Park, Kyoung-Mi; Gontarz, Paul; Zhang, Bo; Pan, Joshua; McKenzie, Zachary; Fischer, Laura A; Dong, Chen; Dietmann, Sabine; Xing, Xiaoyun; Shliaha, Pavel V; Yang, Jihong; Li, Dan; Ding, Junjun; Lungjangwa, Tenzin; Mitalipova, Maya; Khan, Shafqat A; Imsoonthornruksa, Sumeth; Jensen, Nick; Wang, Ting; Kadoch, Cigall; Jaenisch, Rudolf; Wang, Jianlong; Theunissen, Thorold W | Nature communications | 34446700 | 2021 08 26 |
| POLYseq: A poly(β-amino ester)-based vector for multifunctional cellular barcoding. | Dunn, Andrew; Cai, Yuqi; Iwasawa, Kentaro; Kimura, Masaki; Takebe, Takanori | Stem cell reports | 34450040 | 2021 Sep 14 |
| Regulatory T cells promote innate inflammation after skin barrier breach via TGF-β activation. | Moreau, Joshua M; Dhariwala, Miqdad O; Gouirand, Victoire; Boda, Devi P; Boothby, Ian C; Lowe, Margaret M; Cohen, Jarish N; Macon, Courtney E; Leech, John M; Kalekar, Lokesh A; Scharschmidt, Tiffany C; Rosenblum, Michael D | Science immunology | 34452925 | 2021 08 27 |
| Microfluidic Printing of Tunable Hollow Microfibers for Vascular Tissue Engineering. | Wu, Zhuhao; Cai, Hongwei; Ao, Zheng; Xu, Junhua; Heaps, Samuel; Guo, Feng | Advanced materials technologies | 34458563 | 2021 Aug |
| Neighborhood watch: tools for defining locale-dependent subproteomes and their contextual signaling activities. | Long, Marcus J C; Zhao, Yi; Aye, Yimon | RSC chemical biology | 34458747 | 2020 Jun 01 |
| Metabolic regulation of T cells in the tumor microenvironment by nutrient availability and diet. | Zhao, Steven; Peralta, Ronal M; Avina-Ochoa, Natalia; Delgoffe, Greg M; Kaech, Susan M | Seminars in immunology | 34462190 | 2021 Feb |
| Holiday gatherings, mobility and SARS-CoV-2 transmission: results from 10 US states following Thanksgiving. | Mehta, Shruti H; Clipman, Steven J; Wesolowski, Amy; Solomon, Sunil S | Scientific reports | 34462499 | 2021 08 30 |
| Outcomes after a Digital Behavior Change Intervention to Improve Trauma Triage: An Analysis of Medicare Claims. | Mohan, Deepika; Chang, Chung-Chou; Fischhoff, Baruch; Rosengart, Matthew R; Angus, Derek C; Yealy, Donald M; Barnato, Amber E | The Journal of surgical research | 34464890 | 2021 12 |
| Growth-Based, High-Throughput Selection for NADH Preference in an Oxygen-Dependent Biocatalyst. | Maxel, Sarah; Saleh, Samer; King, Edward; Aspacio, Derek; Zhang, Linyue; Luo, Ray; Li, Han | ACS synthetic biology | 34469126 | 2021 09 17 |
| iRQC, a surveillance pathway for 40S ribosomal quality control during mRNA translation initiation. | Garshott, Danielle M; An, Heeseon; Sundaramoorthy, Elayanambi; Leonard, Marilyn; Vicary, Alison; Harper, J Wade; Bennett, Eric J | Cell reports | 34469731 | 2021 08 31 |
| Spontaneous and deliberate modes of creativity: Multitask eigen-connectivity analysis captures latent cognitive modes during creative thinking. | Xie, Hua; Beaty, Roger E; Jahanikia, Sahar; Geniesse, Caleb; Sonalkar, Neeraj S; Saggar, Manish | NeuroImage | 34469816 | 2021 Nov |
| Toward a neurobiological model of human performance under pressure. | Saikley, Abraham; Haroush, Keren | Proceedings of the National Academy of Sciences of the United States of America | 34470823 | 2021 09 07 |
| Layilin Anchors Regulatory T Cells in Skin. | Mehta, Pooja; Gouirand, Victoire; Boda, Devi P; Zhang, Jingxian; Gearty, Sofia V; Zirak, Bahar; Lowe, Margaret M; Clancy, Sean; Boothby, Ian; Mahuron, Kelly M; Fries, Adam; Krummel, Matthew F; Mankoo, Parminder; Chang, Hsin-Wen; Liu, Jared; Moreau, Joshua M; Scharschmidt, Tiffany C; Daud, Adil; Kim, Esther; Neuhaus, Isaac M; Harris, Hobart W; Liao, Wilson; Rosenblum, Michael D | Journal of immunology (Baltimore, Md. : 1950) | 34470859 | 2021 Oct 01 |
| Cortical overgrowth in a preclinical forebrain organoid model of CNTNAP2-associated autism spectrum disorder. | de Jong, Job O; Llapashtica, Ceyda; Genestine, Matthieu; Strauss, Kevin; Provenzano, Frank; Sun, Yan; Zhu, Huixiang; Cortese, Giuseppe P; Brundu, Francesco; Brigatti, Karlla W; Corneo, Barbara; Migliori, Bianca; Tomer, Raju; Kushner, Steven A; Kellendonk, Christoph; Javitch, Jonathan A; Xu, Bin; Markx, Sander | Nature communications | 34471112 | 2021 09 01 |
| Structure of Geobacter pili reveals secretory rather than nanowire behaviour. | Gu, Yangqi; Srikanth, Vishok; Salazar-Morales, Aldo I; Jain, Ruchi; O'Brien, J Patrick; Yi, Sophia M; Soni, Rajesh Kumar; Samatey, Fadel A; Yalcin, Sibel Ebru; Malvankar, Nikhil S | Nature | 34471289 | 2021 09 |
| An inflammatory switch for stem cell plasticity. | Kathiriya, Jaymin J; Peng, Tien | Nature cell biology | 34475536 | 2021 09 |
| Finding the Spark. | Kralj, Joel M | Bioelectricity | 34476390 | 2021 Jun 01 |
| Environmental fluctuations reshape an unexpected diversity-disturbance relationship in a microbial community. | Mancuso, Christopher P; Lee, Hyunseok; Abreu, Clare I; Gore, Jeff; Khalil, Ahmad S | eLife | 34477107 | 2021 09 03 |
| Dynamic neurogenomic responses to social interactions and dominance outcomes in female paper wasps. | Uy, Floria M K; Jernigan, Christopher M; Zaba, Natalie C; Mehrotra, Eshan; Miller, Sara E; Sheehan, Michael J | PLoS genetics | 34478434 | 2021 Sep |
| Critical windows of susceptibility in the association between manganese and neurocognition in Italian adolescents living near ferro-manganese industry. | Bauer, Julia Anglen; White, Roberta F; Coull, Brent A; Austin, Christine; Oppini, Manuela; Zoni, Silvia; Fedrighi, Chiara; Cagna, Giuseppa; Placidi, Donatella; Guazzetti, Stefano; Yang, Qiong; Bellinger, David C; Webster, Thomas F; Wright, Robert O; Smith, Donald; Horton, Megan; Lucchini, Roberto G; Arora, Manish; Claus Henn, Birgit | Neurotoxicology | 34478771 | 2021 12 |
| Engineering stem cells for cancer immunotherapy. | Li, Yan-Ruide; Zhou, Yang; Kramer, Adam; Yang, Lili | Trends in cancer | 34479851 | 2021 12 |
| Mass cytometry profiling of human dendritic cells in blood and tissues. | Alcántara-Hernández, Marcela; Idoyaga, Juliana | Nature protocols | 34480131 | 2021 10 |
| Deep learning enables fast and dense single-molecule localization with high accuracy. | Speiser, Artur; Müller, Lucas-Raphael; Hoess, Philipp; Matti, Ulf; Obara, Christopher J; Legant, Wesley R; Kreshuk, Anna; Macke, Jakob H; Ries, Jonas; Turaga, Srinivas C | Nature methods | 34480155 | 2021 09 |
| Vaginal delivery of vaccines. | VanBenschoten, Hannah M; Woodrow, Kim A | Advanced drug delivery reviews | 34481031 | 2021 11 |
| Advances in profiling chromatin architecture shed light on the regulatory dynamics underlying brain disorders. | Pratt, Brandon M; Won, Hyejung | Seminars in cell & developmental biology | 34483043 | 2022 01 |
| An Analytical Model for Dual Gate Piezoelectrically Sensitive ZnO Thin Film Transistors. | Oh, Hongseok; Dayeh, Shadi A | Advanced materials technologies | 34485683 | 2021 Aug |
| The Combination of Morphology and Surface Chemistry Defines the Immunological Identity of Nanocarriers in Human Blood. | Vincent, Michael P; Karabin, Nicholas B; Allen, Sean D; Bobbala, Sharan; Frey, Molly A; Yi, Sijia; Yang, Yufan; Scott, Evan A | Advanced therapeutics | 34485684 | 2021 Aug |
| Segmentation of Neurons from Fluorescence Calcium Recordings Beyond Real-time. | Bao, Yijun; Soltanian-Zadeh, Somayyeh; Farsiu, Sina; Gong, Yiyang | Nature machine intelligence | 34485824 | 2021 Jul |
| Considerations Across Three Cultures: Parametric Regressions, Interpretable Algorithms, and Complex Algorithms. | Eloyan, Ani; Rose, Sherri | Observational studies | 34485997 | 2021 Jul |
| Synthetic biomarkers: a twenty-first century path to early cancer detection. | Kwong, Gabriel A; Ghosh, Sharmistha; Gamboa, Lena; Patriotis, Christos; Srivastava, Sudhir; Bhatia, Sangeeta N | Nature reviews. Cancer | 34489588 | 2021 10 |
| Injuries to Children and Adolescents by Law Enforcement: An Analysis of California Emergency Department Visits and Hospitalizations, 2005-2017. | Farkas, Kriszta; Duarte, Catherine dP; Ahern, Jennifer | JAMA pediatrics | 34491288 | 2022 01 01 |
| Discussion on "Estimating vaccine efficacy over time after a randomized study is unblinded" by Anastasios A. Tsiatis and Marie Davidian. | Janes, Holly; Gao, Fei; Luedtke, Alex | Biometrics | 34492117 | 2021 Sep 07 |
| Targeting the IRE1α/XBP1s pathway suppresses CARM1-expressing ovarian cancer. | Lin, Jianhuang; Liu, Heng; Fukumoto, Takeshi; Zundell, Joseph; Yan, Qingqing; Tang, Chih-Hang Anthony; Wu, Shuai; Zhou, Wei; Guo, Dajiang; Karakashev, Sergey; Hu, Chih-Chi Andrew; Sarma, Kavitha; Kossenkov, Andrew V; Zhang, Rugang | Nature communications | 34493732 | 2021 09 07 |
| Inter-cellular CRISPR screens reveal regulators of cancer cell phagocytosis. | Kamber, Roarke A; Nishiga, Yoko; Morton, Bhek; Banuelos, Allison M; Barkal, Amira A; Vences-Catalán, Felipe; Gu, Mingxin; Fernandez, Daniel; Seoane, Jose A; Yao, David; Liu, Katherine; Lin, Sijie; Spees, Kaitlyn; Curtis, Christina; Jerby-Arnon, Livnat; We | Nature | 34497417 | 2021 09 |
| BACH2 is a putative T cell lymphoma tumor suppressor that may play a role in product-derived CAR-T cell lymphomas. | Daniels, Jay; Choi, Jaehyuk | Blood | 34499707 | 2021 Sep 09 |
| GdDO3NI Enhanced Magnetic Resonance Imaging Allows Imaging of Hypoxia After Brain Injury. | Moghadas, Babak; Bharadwaj, Vimala N; Tobey, John P; Tian, Yanqing; Stabenfeldt, Sarah E; Kodibagkar, Vikram D | Journal of magnetic resonance imaging : JMRI | 34499791 | 2022 04 |
| Circulating Tumor DNA Dynamics Predict Benefit from Consolidation Immunotherapy in Locally Advanced Non-Small Cell Lung Cancer. | Moding, Everett J; Liu, Yufei; Nabet, Barzin Y; Chabon, Jacob J; Chaudhuri, Aadel A; Hui, Angela B; Bonilla, Rene F; Ko, Ryan B; Yoo, Christopher H; Gojenola, Linda; Jones, Carol D; He, Jianzhong; Qiao, Yawei; Xu, Ting; Heymach, John V; Tsao, Anne; Liao, Zhongxing; Gomez, Daniel R; Das, Millie; Padda, Sukhmani K; Ramchandran, Kavitha J; Neal, Joel W; Wakelee, Heather A; Loo Jr, Billy W; Lin, Steven H; Alizadeh, Ash A; Diehn, Maximilian | Nature cancer | 34505064 | 2020 Feb |
| PacBio sequencing output increased through uniform and directional fivefold concatenation. | Kanwar, Nisha; Blanco, Celia; Chen, Irene A; Seelig, Burckhard | Scientific reports | 34508117 | 2021 Sep 10 |
| Nanowire Assisted Mechanotyping of Cellular Metastatic Potential. | Paria, Debadrita; Convertino, Annalisa; Raj, Piyush; Glunde, Kristine; Chen, Yun; Barman, Ishan | Advanced functional materials | 34512229 | 2021 Jul 23 |
| Tetris in the Nervous System: What Principles of Neuronal Tiling Can Tell Us About How Glia Play the Game. | DeSantis, Dana F; Smith, Cody J | Frontiers in cellular neuroscience | 34512272 | 2021 |
| Comparison of promoter, DNA vector, and cationic carrier for efficient transfection of hMSCs from multiple donors and tissue sources. | Kozisek, Tyler; Hamann, Andrew; Samuelson, Luke; Fudolig, Miguel; Pannier, Angela K | Molecular therapy. Nucleic acids | 34513295 | 2021 Dec 03 |
| Collapsing Glomerulopathy in Identical Twins With Lupus and High-Risk Apolipoprotein L1 (APOL1) Genotype. | DeOliveira, Margaret; Feeney, Colby; Leahy, Caroline; Nystrom, Sarah; Howell, David N; Farouk, Samira S; Wu, Ming; Olabisi, Opeyemi A; Sparks, Matthew A | Kidney international reports | 34514214 | 2021 Sep |
| Nucleolar maturation of the human small subunit processome. | Singh, Sameer; Vanden Broeck, Arnaud; Miller, Linamarie; Chaker-Margot, Malik; Klinge, Sebastian | Science (New York, N.Y.) | 34516797 | 2021 09 10 |
| Developmental chromatin programs determine oncogenic competence in melanoma. | Baggiolini, Arianna; Callahan, Scott J; Montal, Emily; Weiss, Joshua M; Trieu, Tuan; Tagore, Mohita M; Tischfield, Sam E; Walsh, Ryan M; Suresh, Shruthy; Fan, Yujie; Campbell, Nathaniel R; Perlee, Sarah C; Saurat, Nathalie; Hunter, Miranda V; Simon-Vermot, Theresa; Huang, Ting-Hsiang; Ma, Yilun; Hollmann, Travis; Tickoo, Satish K; Taylor, Barry S; Khurana, Ekta; Koche, Richard P; Studer, Lorenz; White, Richard M | Science (New York, N.Y.) | 34516843 | 2021 09 03 |
| STL-seq reveals pause-release and termination kinetics for promoter-proximal paused RNA polymerase II transcripts. | Zimmer, Joshua T; Rosa-Mercado, Nicolle A; Canzio, Daniele; Steitz, Joan A; Simon, Matthew D | Molecular cell | 34520723 | 2021 11 04 |
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| Methods for Studying Mouse and Human Invariant Natural Killer T Cells. | Zhou, Yang; Li, Yan-Ruide; Zeng, Samuel; Yang, Lili | Methods in molecular biology (Clifton, N.J.) | 34524660 | 2021 |
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| Using Aggregated Relational Data to Feasibly Identify Network Structure without Network Data. | Breza, Emily; Chandrasekhar, Arun G; McCormick, Tyler H; Pan, Mengjie | The American economic review | 34526729 | 2020 Aug |
| Design and development of engineered receptors for cell and tissue engineering. | Javdan, Shwan B; Deans, Tara L | Current opinion in systems biology | 34527831 | 2021 Dec |
| Single-cell lactate production rate as a measure of glycolysis in endothelial cells. | Harrison, Devin; Wu, David; Huang, Jun; Fang, Yun | STAR protocols | 34527962 | 2021 Sep 17 |
| Dopamine release in the nucleus accumbens core signals perceived saliency. | Kutlu, Munir Gunes; Zachry, Jennifer E; Melugin, Patrick R; Cajigas, Stephanie A; Chevee, Maxime F; Kelly, Shannon J; Kutlu, Banu; Tian, Lin; Siciliano, Cody A; Calipari, Erin S | Current biology : CB | 34529938 | 2021 Nov 08 |
| Cooperation between melanoma cell states promotes metastasis through heterotypic cluster formation. | Campbell, Nathaniel R; Rao, Anjali; Hunter, Miranda V; Sznurkowska, Magdalena K; Briker, Luzia; Zhang, Maomao; Baron, Maayan; Heilmann, Silja; Deforet, Maxime; Kenny, Colin; Ferretti, Lorenza P; Huang, Ting-Hsiang; Perlee, Sarah; Garg, Manik; Nsengimana, Jérémie; Saini, Massimo; Montal, Emily; Tagore, Mohita; Newton-Bishop, Julia; Middleton, Mark R; Corrie, Pippa; Adams, David J; Rabbie, Roy; Aceto, Nicola; Levesque, Mitchell P; Cornell, Robert A; Yanai, Itai; Xavier, Joao B; White, Richard M | Developmental cell | 34529939 | 2021 Oct 25 |
| Characterizing human mobility patterns in rural settings of sub-Saharan Africa. | Meredith, Hannah R; Giles, John R; Perez-Saez, Javier; Mande, Théophile; Rinaldo, Andrea; Mutembo, Simon; Kabalo, Elliot N; Makungo, Kabondo; Buckee, Caroline O; Tatem, Andrew J; Metcalf, C Jessica E; Wesolowski, Amy | eLife | 34533456 | 2021 09 17 |
| Establishment of strigolactone-producing bacterium-yeast consortium. | Wu, Sheng; Ma, Xiaoqiang; Zhou, Anqi; Valenzuela, Alex; Zhou, Kang; Li, Yanran | Science advances | 34533983 | 2021 Sep 17 |
| Millimeter-scale chip-based supercontinuum generation for optical coherence tomography. | Ji, Xingchen; Mojahed, Diana; Okawachi, Yoshitomo; Gaeta, Alexander L; Hendon, Christine P; Lipson, Michal | Science advances | 34533990 | 2021 Sep 17 |
| Identifying undercompensated groups defined by multiple attributes in risk adjustment. | Zink, Anna; Rose, Sherri | BMJ health & care informatics | 34535447 | 2021 Sep |
| DDX3X and DDX3Y are redundant in protein synthesis. | Venkataramanan, Srivats; Gadek, Margaret; Calviello, Lorenzo; Wilkins, Kevin; Floor, Stephen | RNA (New York, N.Y.) | 34535544 | 2021 Sep 17 |
| Direct cardiac reprogramming: A new frontier in heart regeneration. | Ardehali, Reza | Seminars in cell & developmental biology | 34538519 | 2022 02 |
| Biological Investigations of Ru(II) Complexes With Diverse β-diketone Ligands. | Ryan, Raphael T; Havrylyuk, Dmytro; Stevens, Kimberly C; Moore, L Henry; Parkin, Sean; Blackburn, Jessica S; Heidary, David K; Selegue, John P; Glazer, Edith C | European journal of inorganic chemistry | 34539235 | 2021 Sep 21 |
| Decoding Optical Data with Machine Learning. | Fang, Jie; Swain, Anand; Unni, Rohit; Zheng, Yuebing | Laser & photonics reviews | 34539925 | 2021 Feb |
| Synthetic Antigen-Presenting Cells for Adoptive T Cell Therapy. | Dahotre, Shreyas N; Romanov, Anna M; Su, Fang-Yi; Kwong, Gabriel A | Advanced therapeutics | 34541300 | 2021 Aug |
| Accurate annotation of protein coding sequences with IDTAXA. | Cooley, Nicholas P; Wright, Erik S | NAR genomics and bioinformatics | 34541527 | 2021 Sep |
| Stem Cell Microarrays for Assessing Growth Factor Signaling in Engineered Glycan Microenvironments. | Michalak, Austen L; Trieger, Greg W; Trieger, Kelsey A; Godula, Kamil | Advanced healthcare materials | 34541824 | 2022 Feb |
| Secret messengers: Extracellular RNA communication in the immune system. | Nation, Grant K; Saffold, Cherie E; Pua, Heather H | Immunological reviews | 34542176 | 2021 Sep 20 |
| Synaptotagmin 7 is targeted to the axonal plasma membrane through γ-secretase processing to promote synaptic vesicle docking in mouse hippocampal neurons. | Vevea, Jason D; Kusick, Grant F; Courtney, Kevin C; Chen, Erin; Watanabe, Shigeki; Chapman, Edwin R | eLife | 34543184 | 2021 09 20 |
| Acetylcholine-gated current translates wake neuronal firing rate information into a spike timing-based code in Non-REM sleep, stabilizing neural network dynamics during memory consolidation. | Skilling, Quinton M; Eniwaye, Bolaji; Clawson, Brittany C; Shaver, James; Ognjanovski, Nicolette; Aton, Sara J; Zochowski, Michal | PLoS computational biology | 34543284 | 2021 Sep |
| Small Molecule Metabolites at the Host-Microbiota Interface. | Bishai, Jason D; Palm, Noah W | Journal of immunology (Baltimore, Md. : 1950) | 34544815 | 2021 10 01 |
| A new era in functional genomics screens. | Przybyla, Laralynne; Gilbert, Luke A | Nature reviews. Genetics | 34545248 | 2022 02 |
| A prion accelerates proliferation at the expense of lifespan. | Garcia, David M; Campbell, Edgar A; Jakobson, Christopher M; Tsuchiya, Mitsuhiro; Shaw, Ethan A; DiNardo, Acadia L; Kaeberlein, Matt; Jarosz, Daniel F | eLife | 34545808 | 2021 09 15 |
| Reemergence of the language network during recovery from severe traumatic brain injury: A pilot functional MRI study. | Coffey, Brian J; Threlkeld, Zachary D; Foulkes, Andrea S; Bodien, Yelena G; Edlow, Brian L | Brain injury | 34546806 | 2021 11 10 |
| Protein-coding repeat polymorphisms strongly shape diverse human phenotypes. | Mukamel, Ronen E; Handsaker, Robert E; Sherman, Maxwell A; Barton, Alison R; Zheng, Yiming; McCarroll, Steven A; Loh, Po-Ru | Science (New York, N.Y.) | 34554798 | 2021 09 24 |
| Global chromatin relabeling accompanies spatial inversion of chromatin in rod photoreceptors. | Smith, Cheryl L; Lan, Yemin; Jain, Rajan; Epstein, Jonathan A; Poleshko, Andrey | Science advances | 34559565 | 2021 Sep 24 |
| ZBTB33 is mutated in clonal hematopoiesis and myelodysplastic syndromes and impacts RNA splicing. | Beauchamp, Ellen M; Leventhal, Matthew; Bernard, Elsa; Hoppe, Emma R; Todisco, Gabriele; Creignou, Maria; Gallì, Anna; Castellano, Cecilia A; McConkey, Marie; Tarun, Akansha; Wong, Waihay; Schenone, Monica; Stanclift, Caroline; Tanenbaum, Benjamin; Malole | Blood cancer discovery | 34568833 | 2021 09 |
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| Intrahepatic cholangiocyte regeneration from an Fgf-dependent extrahepatic progenitor niche in a zebrafish model of Alagille Syndrome. | Zhao, Chengjian; Lancman, Joseph J; Yang, Yi; Gates, Keith P; Cao, Dan; Barske, Lindsey; Matalonga, Jonathan; Pan, Xiangyu; He, Jiaye; Graves, Alyssa; Huisken, Jan; Chen, Chong; Dong, P Duc Si | Hepatology (Baltimore, Md.) | 34569629 | 2022 03 |
| Potential long-term effect of tumor necrosis factor inhibitors on dementia risk: A propensity score matched retrospective cohort study in US veterans. | Zheng, Chunlei; Fillmore, Nathanael R; Ramos-Cejudo, Jaime; Brophy, Mary; Osorio, Ricardo; Gurney, Mark E; Qiu, Wei Qiao; Au, Rhoda; Perry, George; Dubreuil, Maureen; Chen, Shu G; Qi, Xin; Davis, Pamela B; Do, Nhan; Xu, Rong | Alzheimer's & dementia : the journal of the Alzheimer's Association | 34569707 | 2021 Sep 27 |
| Protein Corona Inhibits Endosomal Escape of Functionalized DNA Nanostructures in Living Cells. | Smolková, Barbora; MacCulloch, Tara; Rockwood, Tyler F; Liu, Minghui; Henry, Skylar J W; Frtús, Adam; Uzhytchak, Mariia; Lunova, Mariia; Hof, Martin; Jurkiewicz, Piotr; Dejneka, Alexandr; Stephanopoulos, Nicholas; Lunov, Oleg | ACS applied materials & interfaces | 34569777 | 2021 Oct 06 |
| Spatiotemporal dynamics of PIEZO1 localization controls keratinocyte migration during wound healing. | Holt, Jesse R; Zeng, Wei-Zheng; Evans, Elizabeth L; Woo, Seung-Hyun; Ma, Shang; Abuwarda, Hamid; Loud, Meaghan; Patapoutian, Ardem; Pathak, Medha M | eLife | 34569935 | 2021 Sep 27 |
| Epidermal-Derived Hedgehog Signaling Drives Mesenchymal Proliferation during Digit Tip Regeneration. | Maan, Zeshaan N; Rinkevich, Yuval; Barrera, Janos; Chen, Kellen; Henn, Dominic; Foster, Deshka; Bonham, Clark Andrew; Padmanabhan, Jagannath; Sivaraj, Dharshan; Duscher, Dominik; Hu, Michael; Yan, Kelley; Januszyk, Michael; Longaker, Michael T; Weissman, Irving L; Gurtner, Geoffrey C | Journal of clinical medicine | 34575372 | 2021 Sep 20 |
| Versatile Polymer Nanocapsules via Redox Competition. | Zhou, Jiajing; Xu, Ming; Jin, Zhicheng; Borum, Raina M; Avakyan, Nicole; Cheng, Yong; Yim, Wonjun; He, Tengyu; Zhou, Jingcheng; Wu, Zhuohong; Mantri, Yash; Jokerst, Jesse V | Angewandte Chemie (International ed. in English) | 34580967 | 2021 12 06 |
| Reactivity to UV Radiation Exposure Monitoring Using Personal Exposure Devices for Skin Cancer Prevention: Longitudinal Observational Study. | Parsons, Bridget G; Nagelhout, Elizabeth S; Wankier, Ali P; Hu, Nan; Lensink, Riley; Zhu, Angela; Nottingham, Katy; Grossman, Douglas; Jensen, Jakob D; Wu, Yelena P | JMIR mHealth and uHealth | 34581683 | 2021 09 28 |
| Cellular activity in insular cortex across seconds to hours: Sensations and predictions of bodily states. | Livneh, Yoav; Andermann, Mark L | Neuron | 34582784 | 2021 Nov 17 |
| Glycocalyx crowding with mucin mimetics strengthens binding of soluble and virus-associated lectins to host cell glycan receptors. | Honigfort, Daniel J; Altman, Meghan O; Gagneux, Pascal; Godula, Kamil | Proceedings of the National Academy of Sciences of the United States of America | 34583992 | 2021 Oct 05 |
| Measuring kinetics and metastatic propensity of CTCs by blood exchange between mice. | Hamza, Bashar; Miller, Alex B; Meier, Lara; Stockslager, Max; Ng, Sheng Rong; King, Emily M; Lin, Lin; DeGouveia, Kelsey L; Mulugeta, Nolawit; Calistri, Nicholas L; Strouf, Haley; Bray, Christina; Rodriguez, Felicia; Freed-Pastor, William A; Chin, Christopher R; Jaramillo, Grissel C; Burger, Megan L; Weinberg, Robert A; Shalek, Alex K; Jacks, Tyler; Manalis, Scott R | Nature communications | 34584084 | 2021 09 28 |
| Synthesis, biological evaluation, and in silico study of novel library sulfonates containing quinazolin-4(3H)-one derivatives as potential aldose reductase inhibitors. | Tokalı, Feyzi Sinan; Demir, Yeliz; Demircioğlu, İbrahim Hakkı; Türkeş, Cüneyt; Kalay, Erbay; Şendil, Kıvılcım; Beydemir, Şükrü | Drug development research | 34585414 | 2021 Sep 28 |
| Neural basis for regulation of vasopressin secretion by anticipated disturbances in osmolality. | Kim, Angela; Madara, Joseph C; Wu, Chen; Andermann, Mark L; Lowell, Bradford B | eLife | 34585668 | 2021 Sep 29 |
| Selective destabilization of polypeptides synthesized from NMD-targeted transcripts. | Chu, Vincent; Feng, Qing; Lim, Yang; Shao, Sichen | Molecular biology of the cell | 34586879 | 2021 12 01 |
| A neurodevelopmental disorders perspective into music, social attention, and social bonding. | Kasdan, Anna; Gordon, Reyna L; Lense, Miriam D | The Behavioral and brain sciences | 34588066 | 2021 09 30 |
| Development of a pan-neuronal genetic driver in Aedes aegypti mosquitoes. | Zhao, Zhilei; Tian, David; McBride, Carolyn S | Cell reports methods | 34590074 | 2021 Jul 26 |
| The in vivo fate of tobacco mosaic virus nanoparticle theranostic agents modified by the addition of a polydopamine coat. | Nkanga, Christian Isalomboto; Chung, Young Hun; Shukla, Sourabh; Zhou, Jingcheng; Jokerst, Jesse V; Steinmetz, Nicole F | Biomaterials science | 34591046 | 2021 Oct 26 |
| Kinetic modeling reveals additional regulation at co-transcriptional level by post-transcriptional sRNA regulators. | Reyer, Matthew A; Chennakesavalu, Shriram; Heideman, Emily M; Ma, Xiangqian; Bujnowska, Magda; Hong, Lu; Dinner, Aaron R; Vanderpool, Carin K; Fei, Jingyi | Cell reports | 34592145 | 2021 09 28 |
| Anipose: A toolkit for robust markerless 3D pose estimation. | Karashchuk, Pierre; Rupp, Katie L; Dickinson, Evyn S; Walling-Bell, Sarah; Sanders, Elischa; Azim, Eiman; Brunton, Bingni W; Tuthill, John C | Cell reports | 34592148 | 2021 Sep 28 |
| Light-guided sectioning for precise in situ localization and tissue interface analysis for brain-implanted optical fibers and GRIN lenses. | Kahan, Anat; Greenbaum, Alon; Jang, Min J; Robinson, J Elliott; Cho, Jounhong Ryan; Chen, Xinhong; Kassraian, Pegah; Wagenaar, Daniel A; Gradinaru, Viviana | Cell reports | 34592157 | 2021 Sep 28 |
| Rare, Damaging DNA Variants in CORIN and Risk of Coronary Artery Disease: Insights From Functional Genomics and Large-Scale Sequencing Analyses. | Wang, Minxian; Lee-Kim, Vivian S; Atri, Deepak S; Elowe, Nadine H; Yu, John; Garvie, Colin W; Won, Hong-Hee; Hadaya, Joseph E; MacDonald, Bryan T; Trindade, Kevin; Melander, Olle; Rader, Daniel J; Natarajan, Pradeep; Kathiresan, Sekar; Kaushik, Virendar K; Khera, Amit V; Gupta, Rajat M | Circulation. Genomic and precision medicine | 34592835 | 2021 10 |
| Epigenetic encoding, heritability and plasticity of glioma transcriptional cell states. | Chaligne, Ronan; Gaiti, Federico; Silverbush, Dana; Schiffman, Joshua S; Weisman, Hannah R; Kluegel, Lloyd; Gritsch, Simon; Deochand, Sunil D; Gonzalez Castro, L Nicolas; Richman, Alyssa R; Klughammer, Johanna; Biancalani, Tommaso; Muus, Christoph; Sheridan, Caroline; Alonso, Alicia; Izzo, Franco; Park, Jane; Rozenblatt-Rosen, Orit; Regev, Aviv; Suvà, Mario L; Landau, Dan A | Nature genetics | 34594037 | 2021 10 |
| Diels-Alder Cycloadditions for Peptide Macrocycle Formation. | Montgomery, Jeffrey E; Moellering, Raymond E | Methods in molecular biology (Clifton, N.J.) | 34596848 | 2022 |
| Driving Single Cell Proteomics Forward with Innovation. | Slavov, Nikolai | Journal of proteome research | 34597050 | 2021 Oct 01 |
| Evolving Small-Molecule Biosensors with Improved Performance and Reprogrammed Ligand Preference Using OrthoRep. | Javanpour, Alex A; Liu, Chang C | ACS synthetic biology | 34597502 | 2021 10 15 |
| Identification of cell wall synthesis inhibitors active against Mycobacterium tuberculosis by competitive activity-based protein profiling. | Li, Michael; Patel, Hiren V; Cognetta 3rd, Armand B; Smith 2nd, Trever C; Mallick, Ivy; Cavalier, Jean-François; Previti, Mary L; Canaan, Stéphane; Aldridge, Bree B; Cravatt, Benjamin F; Seeliger, Jessica C | Cell chemical biology | 34599873 | 2021 Sep 30 |
| Single cell biology-a Keystone Symposia report. | Cable, Jennifer; Elowitz, Michael B; Domingos, Ana I; Habib, Naomi; Itzkovitz, Shalev; Hamidzada, Homaira; Balzer, Michael S; Yanai, Itai; Liberali, Prisca; Whited, Jessica; Streets, Aaron; Cai, Long; Stergachis, Andrew B; Hong, Clarice Kit Yee; Keren, Le | Annals of the New York Academy of Sciences | 34605044 | 2021 12 |
| ezTrack-A Step-by-Step Guide to Behavior Tracking. | Pennington, Zachary T; Diego, Keziah S; Francisco, Taylor R; LaBanca, Alexa R; Lamsifer, Sophia I; Liobimova, Olga; Shuman, Tristan; Cai, Denise J | Current protocols | 34610215 | 2021 Oct |
| Open-source Longitudinal Sleep Analysis From Accelerometer Data (DPSleep): Algorithm Development and Validation. | Rahimi-Eichi, Habiballah; Coombs Iii, Garth; Vidal Bustamante, Constanza M; Onnela, Jukka-Pekka; Baker, Justin T; Buckner, Randy L | JMIR mHealth and uHealth | 34612831 | 2021 10 06 |
| Glycocalyx Curving the Membrane: Forces Emerging from the Cell Exterior. | Kuo, Joe Chin-Hun; Paszek, Matthew J | Annual review of cell and developmental biology | 34613816 | 2021 Oct 06 |
| Organoid transplant approaches for the liver. | Reza, Hasan Al; Okabe, Ryo; Takebe, Takanori | Transplant international : official journal of the European Society for Organ Transplantation | 34614263 | 2021 Nov |
| Opposing motors provide mechanical and functional robustness in the human spindle. | Neahring, Lila; Cho, Nathan H; Dumont, Sophie | Developmental cell | 34614397 | 2021 Nov 08 |
| Spectrally-tunable femtosecond single-molecule pump-probe spectroscopy. | Moya, Raymundo; Kondo, Toru; Norris, Audrey C; Schlau-Cohen, Gabriela S | Optics express | 34614960 | 2021 Aug 30 |
| 18F-FMISO PET Imaging Identifies Hypoxia and Immunosuppressive Tumor Microenvironments and Guides Targeted Evofosfamide Therapy in Tumors Refractory to PD-1 and CTLA-4 Inhibition. | Reeves, Kirsten M; Song, Patrick N; Angermeier, Allyson; Della Manna, Deborah; Li, Yufeng; Wang, Jianbo; Yang, Eddy S; Sorace, Anna G; Larimer, Benjamin M | Clinical cancer research : an official journal of the American Association for Cancer Research | 34615724 | 2022 01 15 |
| 5-HT modulation of a medial septal circuit tunes social memory stability. | Wu, Xiaoting; Morishita, Wade; Beier, Kevin T; Heifets, Boris D; Malenka, Robert C | Nature | 34616037 | 2021 11 |
| A transcriptomic atlas of mouse cerebellar cortex comprehensively defines cell types. | Kozareva, Velina; Martin, Caroline; Osorno, Tomas; Rudolph, Stephanie; Guo, Chong; Vanderburg, Charles; Nadaf, Naeem; Regev, Aviv; Regehr, Wade G; Macosko, Evan | Nature | 34616064 | 2021 10 |
| Early Rehabilitation for Patients with Disorders of Consciousness after Severe COVID-19. | Edlow, Brian L | Neurocritical care | 34617252 | 2021 Oct 06 |
| Neighborhood poverty, allostatic load, and changes in cellular aging in African American young adults: the moderating role of attachment. | Ehrlich, Katherine B; Yu, Tianyi; Sadiq, Aishat; Brody, Gene H | Attachment & human development | 34617499 | 2022 06 |
| Heterodimerization of H3K9 histone methyltransferases G9a and GLP activates methyl reading and writing capabilities. | Sanchez, Nicholas A; Kallweit, Lena M; Trnka, Michael J; Clemmer, Charles L; Al-Sady, Bassem | The Journal of biological chemistry | 34619147 | 2021 Oct 05 |
| Plasticity between visual input pathways and the head direction system. | Kim, Sung Soo | Current opinion in neurobiology | 34619578 | 2021 12 |
| Skin-penetrating nematodes exhibit life-stage-specific interactions with host-associated and environmental bacteria. | Chavez, Ivan N; Brown, Taylor M; Assié, Adrien; Bryant, Astra S; Samuel, Buck S; Hallem, Elissa A | BMC biology | 34620172 | 2021 10 07 |
| Cohesin Core Complex Gene Dosage Contributes to Germinal Center Derived Lymphoma Phenotypes and Outcomes. | Rivas, Martin A; Durmaz, Ceyda; Kloetgen, Andreas; Chin, Cristopher R; Chen, Zhengming; Bhinder, Bhavneet; Koren, Amnon; Viny, Aaron D; Scharer, Christopher D; Boss, Jeremy M; Elemento, Olivier; Mason, Christopher E; Melnick, Ari M | Frontiers in immunology | 34621263 | 2021 |
| ClusterMap for multi-scale clustering analysis of spatial gene expression. | He, Yichun; Tang, Xin; Huang, Jiahao; Ren, Jingyi; Zhou, Haowen; Chen, Kevin; Liu, Albert; Shi, Hailing; Lin, Zuwan; Li, Qiang; Aditham, Abhishek; Ounadjela, Johain; Grody, Emanuelle I; Shu, Jian; Liu, Jia; Wang, Xiao | Nature communications | 34625546 | 2021 Oct 08 |
| In situ and transcriptomic identification of microglia in synapse-rich regions of the developing zebrafish brain. | Silva, Nicholas J; Dorman, Leah C; Vainchtein, Ilia D; Horneck, Nadine C; Molofsky, Anna V | Nature communications | 34625548 | 2021 10 08 |
| Kidney development to kidney organoids and back again. | Gupta, Navin; Morizane, Ryuji | Seminars in cell & developmental biology | 34627669 | 2021 Oct 06 |
| Crosstalk Between CD11b and Piezo1 Mediates Macrophage Responses to Mechanical Cues. | Atcha, Hamza; Meli, Vijaykumar S; Davis, Chase T; Brumm, Kyle T; Anis, Sara; Chin, Jessica; Jiang, Kevin; Pathak, Medha M; Liu, Wendy F | Frontiers in immunology | 34630381 | 2021 |
| Identification of antibiotic pairs that evade concurrent resistance via a retrospective analysis of antimicrobial susceptibility test results. | Beckley, Andrew M; Wright, Erik S | The Lancet. Microbe | 34632433 | 2021 Oct |
| Quantification of irrigated lesion morphology using near-infrared spectroscopy. | Park, Soo Young; Singh-Moon, Rajinder; Yang, Haiqiu; Saluja, Deepak; Hendon, Christine | Scientific reports | 34635764 | 2021 Oct 11 |
| Volumetric interferometric lattice light-sheet imaging. | Cao, Bin; Coelho, Simao; Li, Jieru; Wang, Guanshi; Pertsinidis, Alexandros | Nature biotechnology | 34635835 | 2021 Nov |
| Switch-like and persistent memory formation in individual Drosophila larvae. | Lesar, Amanda; Tahir, Javan; Wolk, Jason; Gershow, Marc | eLife | 34636720 | 2021 10 12 |
| FindNonCoding: rapid and simple detection of non-coding RNAs in genomes. | Wright, Erik S | Bioinformatics (Oxford, England) | 34636849 | 2022 Jan 12 |
| Distinct recruitment of feedforward and recurrent pathways across higher-order areas of mouse visual cortex. | Li, Jennifer Y; Hass, Charles A; Matthews, Ian; Kristl, Amy C; Glickfeld, Lindsey L | Current biology : CB | 34637748 | 2021 Nov 22 |
| Schizophrenia-Linked Protein tSNARE1 Regulates Endosomal Trafficking in Cortical Neurons. | Plooster, Melissa; Rossi, Guendalina; Farrell, Martilias S; McAfee, Jessica C; Bell, Jessica L; Ye, Michael; Diering, Graham H; Won, Hyejung; Gupton, Stephanie L; Brennwald, Patrick | The Journal of neuroscience : the official journal of the Society for Neuroscience | 34642214 | 2021 Nov 10 |
| One year of modeling and forecasting COVID-19 transmission to support policymakers in Connecticut. | Morozova, Olga; Li, Zehang Richard; Crawford, Forrest W | Scientific reports | 34642405 | 2021 10 12 |
| Long-Term Recovery from Disordered Consciousness Associated with COVID-19. | Fischer, David; Edlow, Brian L | Neurocritical care | 34642843 | 2021 12 |
| Development of a theory-based video-game intervention to increase advance care planning conversations by healthcare providers. | Mohan, Deepika; MacMartin, Meredith A; Chelen, Julia S C; Maezes, Carolyn B; Barnato, Amber E | Implementation science communications | 34645515 | 2021 Oct 13 |
| Raman Spectroscopy and Machine Learning Reveals Early Tumor Microenvironmental Changes Induced by Immunotherapy. | Paidi, Santosh Kumar; Rodriguez Troncoso, Joel; Raj, Piyush; Monterroso Diaz, Paola; Ivers, Jesse D; Lee, David E; Avaritt, Nathan L; Gies, Allen J; Quick, Charles M; Byrum, Stephanie D; Tackett, Alan J; Rajaram, Narasimhan; Barman, Ishan | Cancer research | 34645610 | 2021 11 15 |
| Differential impact of a dyskeratosis congenita mutation in TPP1 on mouse hematopoiesis and germline. | Graniel, Jacqueline V; Bisht, Kamlesh; Friedman, Ann; White, James; Perkey, Eric; Vanderbeck, Ashley; Moroz, Alina; Carrington, Léolène J; Brandstadter, Joshua D; Allen, Frederick; Shami, Adrienne Niederriter; Thomas, Peedikayil; Crayton, Aniela; Manzor, Mariel; Mychalowych, Anna; Chase, Jennifer; Hammoud, Saher S; Keegan, Catherine E; Maillard, Ivan; Nandakumar, Jayakrishnan | Life science alliance | 34645668 | 2022 Jan |
| Infectious disease in an era of global change. | Baker, Rachel E; Mahmud, Ayesha S; Miller, Ian F; Rajeev, Malavika; Rasambainarivo, Fidisoa; Rice, Benjamin L; Takahashi, Saki; Tatem, Andrew J; Wagner, Caroline E; Wang, Lin-Fa; Wesolowski, Amy; Metcalf, C Jessica E | Nature reviews. Microbiology | 34646006 | 2021 Oct 13 |
| Concerted Differential Changes of Helical Dynamics and Packing upon Ligand Occupancy in a Bacterial Chemoreceptor. | Gordon, Jesse B; Hoffman, Mikaila C; Troiano, Julianne M; Li, Mingshan; Hazelbauer, Gerald L; Schlau-Cohen, Gabriela S | ACS chemical biology | 34647725 | 2021 11 19 |
| Modulation of tactile feedback for the execution of dexterous movement. | Conner, James M; Bohannon, Andrew; Igarashi, Masakazu; Taniguchi, James; Baltar, Nicholas; Azim, Eiman | Science (New York, N.Y.) | 34648327 | 2021 10 15 |
| Cultivation of common bacterial species and strains from human skin, oral, and gut microbiota. | Fleming, Elizabeth; Pabst, Victor; Scholar, Zoe; Xiong, Ruoyun; Voigt, Anita Y; Zhou, Wei; Hoyt, Amelia; Hardy, Rachel; Peterson, Anna; Beach, Ryan; Ondouah-Nzutchi, Yvette; Dong, Jinhong; Bateman, Lucinda; Vernon, Suzanne D; Oh, Julia | BMC microbiology | 34649516 | 2021 10 14 |
| A microfluidic platform for highly parallel bite by bite profiling of mosquito-borne pathogen transmission. | Kumar, Shailabh; Hol, Felix J H; Pujhari, Sujit; Ellington, Clayton; Narayanan, Haripriya Vaidehi; Li, Hongquan; Rasgon, Jason L; Prakash, Manu | Nature communications | 34650045 | 2021 10 14 |
| The dynamic, combinatorial cis-regulatory lexicon of epidermal differentiation. | Kim, Daniel S; Risca, Viviana I; Reynolds, David L; Chappell, James; Rubin, Adam J; Jung, Namyoung; Donohue, Laura K H; Lopez-Pajares, Vanessa; Kathiria, Arwa; Shi, Minyi; Zhao, Zhixin; Deep, Harsh; Sharmin, Mahfuza; Rao, Deepti; Lin, Shin; Chang, Howard Y; Snyder, Michael P; Greenleaf, William J; Kundaje, Anshul; Khavari, Paul A | Nature genetics | 34650237 | 2021 11 |
| Deletion and replacement of long genomic sequences using prime editing. | Jiang, Tingting; Zhang, Xiao-Ou; Weng, Zhiping; Xue, Wen | Nature biotechnology | 34650270 | 2021 Oct 14 |
| Regulatory T-cells inhibit microglia-induced pain hypersensitivity in female mice. | Kuhn, Julia A; Vainchtein, Ilia D; Braz, Joao; Hamel, Katherine; Bernstein, Mollie; Craik, Veronica; Dahlgren, Madelene W; Ortiz-Carpena, Jorge; Molofsky, Ari B; Molofsky, Anna V; Basbaum, Allan I | eLife | 34652270 | 2021 Oct 15 |
| Prenatal Gene Therapy for Metabolic Disorders. | Coons, Barbara; Peranteau, William H | Clinical obstetrics and gynecology | 34652302 | 2021 12 01 |
| Generalizing hydrogel microparticles into a new class of bioinks for extrusion bioprinting. | Xin, Shangjing; Deo, Kaivalya A; Dai, Jing; Pandian, Navaneeth Krishna Rajeeva; Chimene, David; Moebius, Robert M; Jain, Abhishek; Han, Arum; Gaharwar, Akhilesh K; Alge, Daniel L | Science advances | 34652944 | 2021 Oct 15 |
| A fiber optic photoacoustic sensor for real-time heparin monitoring. | Zhou, Jingcheng; Yim, Wonjun; Zhou, Jiajing; Jin, Zhicheng; Xu, Ming; Mantri, Yash; He, Tengyu; Cheng, Yong; Fu, Lei; Wu, Zhuohong; Hancock, Tiffany; Penny, William; Jokerst, Jesse V | Biosensors & bioelectronics | 34653712 | 2022 Jan 15 |
| Extracellular vesicles: mediators of intercellular communication in tissue injury and disease. | Berumen Sánchez, Greg; Bunn, Kaitlyn E; Pua, Heather H; Rafat, Marjan | Cell communication and signaling : CCS | 34656117 | 2021 10 16 |
| Risk factors for 2-year mortality in patients with prolonged disorders of consciousness: An international multicentre study. | Estraneo, Anna; Magliacano, Alfonso; Fiorenza, Salvatore; Formisano, Rita; Grippo, Antonello; Angelakis, Efthymios; Cassol, Helena; Thibaut, Aurore; Gosseries, Olivia; Lamberti, Gianfranco; Noé, Enrique; Bagnato, Sergio; Edlow, Brian L; Chatelle, Camille; Lejeune, Nicolas; Veeramuthu, Vigneswaran; Bartolo, Michelangelo; Mattia, Donatella; Toppi, Jlenia; Zasler, Nathan; Schnakers, Caroline; Trojano, Luigi | European journal of neurology | 34657359 | 2022 02 |
| Crème de la Créature: Dietary Influences on Behavior in Animal Models. | Sarangi, Manaswini; Dus, Monica | Frontiers in behavioral neuroscience | 34658807 | 2021 |
| Surface Glycans Regulate Salmonella Infection-Dependent Directional Switch in Macrophage Galvanotaxis Independent of NanH. | Sun, Y H; Luxardi, G; Xu, G; Zhu, K; Reid, B; Guo, B P; Lebrilla, C B; Maverakis, E; Zhao, M | Infection and immunity | 34662214 | 2022 01 25 |
| In Situ Deployment of Engineered Extracellular Vesicles into the Tumor Niche via Myeloid-Derived Suppressor Cells. | Duarte-Sanmiguel, Silvia; Panic, Ana; Dodd, Daniel J; Salazar-Puerta, Ana; Moore, Jordan T; Lawrence, William R; Nairon, Kylie; Francis, Carlie; Zachariah, Natalie; McCoy, William; Turaga, Rithvik; Skardal, Aleksander; Carson, William E; Higuita-Castro, Natalia; Gallego-Perez, Daniel | Advanced healthcare materials | 34662497 | 2022 Mar |
| A global cancer data integrator reveals principles of synthetic lethality, sex disparity and immunotherapy. | Yogodzinski, Christopher; Arab, Abolfazl; Pritchard, Justin R; Goodarzi, Hani; Gilbert, Luke A | Genome medicine | 34663427 | 2021 Oct 18 |
| Genomic approaches to trace the history of human brain evolution with an emerging opportunity for transposon profiling of ancient humans. | Wang, Yilan; Zhao, Boxun; Choi, Jaejoon; Lee, Eunjung Alice | Mobile DNA | 34663455 | 2021 Oct 18 |
| scAAVengr, a transcriptome-based pipeline for quantitative ranking of engineered AAVs with single-cell resolution. | Öztürk, Bilge E; Johnson, Molly E; Kleyman, Michael; Turunç, Serhan; He, Jing; Jabalameli, Sara; Xi, Zhouhuan; Visel, Meike; Dufour, Valérie L; Iwabe, Simone; Pompeo Marinho, Luis Felipe L; Aguirre, Gustavo D; Sahel, José-Alain; Schaffer, David V; Pfenning, Andreas R; Flannery, John G; Beltran, William A; Stauffer, William R; Byrne, Leah C | eLife | 34664552 | 2021 Oct 19 |
| Cell-surface Labeling via Bioorthogonal Host-Guest Chemistry. | Kataki-Anastasakou, Anna; Hernandez, Selena; Sletten, Ellen M | ACS chemical biology | 34669367 | 2021 11 19 |
| Orthogonal Design of Experiments for Optimization of Lipid Nanoparticles for mRNA Engineering of CAR T Cells. | Billingsley, Margaret M; Hamilton, Alex G; Mai, David; Patel, Savan K; Swingle, Kelsey L; Sheppard, Neil C; June, Carl H; Mitchell, Michael J | Nano letters | 34669421 | 2022 01 12 |
| Rapid genetic screening with high quality factor metasurfaces. | Hu, Jack; Safir, Fareeha; Chang, Kai; Dagli, Sahil; Balch, Halleh B; Abendroth, John M; Dixon, Jefferson; Moradifar, Parivash; Dolia, Varun; Sahoo, Malaya K; Pinsky, Benjamin A; Jeffrey, Stefanie S; Lawrence, Mark; Dionne, Jennifer A | ArXiv | 34671699 | 2021 Oct 15 |
| Non-Covalent Coatings on Carbon Nanotubes Mediate Photosensitizer Interactions. | Horoszko, Christopher P; Schnatz, Peter J; Budhathoki-Uprety, Januka; Rao-Pothuraju, Rahul V; Koder, Ronald L; Heller, Daniel A | ACS applied materials & interfaces | 34672190 | 2021 Nov 03 |
| Cortical representation of group social communication in bats. | Rose, Maimon C; Styr, Boaz; Schmid, Tobias A; Elie, Julie E; Yartsev, Michael M | Science (New York, N.Y.) | 34672724 | 2021 10 22 |
| Identification of causal intervention effects under contagion. | Cai, Xiaoxuan; Loh, Wen Wei; Crawford, Forrest W | Journal of causal inference | 34676152 | 2021 Jan |
| Dissecting Biological and Synthetic Soft-Hard Interfaces for Tissue-Like Systems. | Fang, Yin; Yang, Xiao; Lin, Yiliang; Shi, Jiuyun; Prominski, Aleksander; Clayton, Clementene; Ostroff, Ellie; Tian, Bozhi | Chemical reviews | 34677943 | 2021 Oct 22 |
| Functions predict horizontal gene transfer and the emergence of antibiotic resistance. | Zhou, Hao; Beltrán, Juan Felipe; Brito, Ilana Lauren | Science advances | 34678056 | 2021 Oct 22 |
| Demonstration of diamond nuclear spin gyroscope. | Jarmola, Andrey; Lourette, Sean; Acosta, Victor M; Birdwell, A Glen; Blümler, Peter; Budker, Dmitry; Ivanov, Tony; Malinovsky, Vladimir S | Science advances | 34678066 | 2021 Oct 22 |
| Compartmentalized dynamics within a common multi-area mesoscale manifold represent a repertoire of human hand movements. | Natraj, Nikhilesh; Silversmith, Daniel B; Chang, Edward F; Ganguly, Karunesh | Neuron | 34678147 | 2022 01 05 |
| Engineering digitizer circuits for chemical and genetic screens in human cells. | Wong, Nicole M; Frias, Elizabeth; Sigoillot, Frederic D; Letendre, Justin H; Hild, Marc; Wong, Wilson W | Nature communications | 34686672 | 2021 10 22 |
| State of Residency: Microbial Strain Diversity in the Skin. | Kong, Heidi H; Oh, Julia | The Journal of investigative dermatology | 34688614 | 2022 May |
| Specialized Mechanosensory Epithelial Cells in Mouse Gut Intrinsic Tactile Sensitivity. | Treichel, Anthony J; Finholm, Isabelle; Knutson, Kaitlyn R; Alcaino, Constanza; Whiteman, Sara T; Brown, Matthew R; Matveyenko, Aleksey; Wegner, Andrew; Kacmaz, Halil; Mercado-Perez, Arnaldo; Gajdos, Gabriella Bedekovicsne; Ordog, Tamas; Grover, Madhusudan; Szurszewski, Joseph; Linden, David R; Farrugia, Gianrico; Beyder, Arthur | Gastroenterology | 34688712 | 2022 02 |
| Coping with darkness: The adaptive response of marine picocyanobacteria to repeated light energy deprivation. | Coe, Allison; Biller, Steven J; Thomas, Elaina; Boulias, Konstantinos; Bliem, Christina; Arellano, Aldo; Dooley, Keven; Rasmussen, Anna N; LeGault, Kristen; O'Keefe, Tyler J; Stover, Sarah; Greer, Eric L; Chisholm, Sallie W | Limnology and oceanography | 34690365 | 2021 Sep |
| Cell-Cell Communication Networks in Tissue: Toward Quantitatively Linking Structure with Function. | Luthria, Gaurav; Lauffenburger, Douglas; Miller, Miles A | Current opinion in systems biology | 34693081 | 2021 Sep |
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| AAV5 delivery of CRISPR-Cas9 supports effective genome editing in mouse lung airway. | Liang, Shun-Qing; Walkey, Christopher J; Martinez, Alexa E; Su, Qin; Dickinson, Mary E; Wang, Dan; Lagor, William R; Heaney, Jason D; Gao, Guangping; Xue, Wen | Molecular therapy : the journal of the American Society of Gene Therapy | 34695545 | 2021 Oct 23 |
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| Metabolism in the Midwest: research from the Midwest Aging Consortium at the 49th Annual Meeting of the American Aging Association. | Murphy, Michaela E; Narasimhan, Akilavalli; Adrian, Alexis; Kumar, Ankur; Green, Cara L; Soto-Palma, Carolina; Henpita, Chathurika; Camell, Christina; Morrow, Christopher S; Yeh, Chung-Yang; Richardson, Claire E; Hill, Cristal M; Moore, Darcie L; Lamming, | GeroScience | 34714522 | 2022 02 |
| Parasitic nematode fatty acid- and retinol-binding proteins compromise host immunity by interfering with host lipid signaling pathways. | Parks, Sophia C; Nguyen, Susan; Nasrolahi, Shyon; Bhat, Chaitra; Juncaj, Damian; Lu, Dihong; Ramaswamy, Raghavendran; Dhillon, Harpal; Fujiwara, Hideji; Buchman, Anna; Akbari, Omar S; Yamanaka, Naoki; Boulanger, Martin J; Dillman, Adler R | PLoS pathogens | 34714893 | 2021 10 |
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| Multiplexed single-cell proteomics using SCoPE2. | Petelski, Aleksandra A; Emmott, Edward; Leduc, Andrew; Huffman, R Gray; Specht, Harrison; Perlman, David H; Slavov, Nikolai | Nature protocols | 34716448 | 2021 Dec |
| Measurement Biases Distort Cell-Free DNA Fragmentation Profiles and Define the Sensitivity of Metagenomic Cell-Free DNA Sequencing Assays. | Chang, Adrienne; Mzava, Omary; Lenz, Joan S; Cheng, Alexandre P; Burnham, Philip; Motley, S Timothy; Bennett, Crissa; Connelly, John T; Dadhania, Darshana M; Suthanthiran, Manikkam; Lee, John R; Steadman, Amy; De Vlaminck, Iwijn | Clinical chemistry | 34718476 | 2021 Dec 30 |
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| In-Cell Sensitivity-Enhanced NMR of Intact Viable Mammalian Cells. | Ghosh, Rupam; Xiao, Yiling; Kragelj, Jaka; Frederick, Kendra K | Journal of the American Chemical Society | 34724614 | 2021 11 10 |
| RapID Cell Counter: Semi-Automated and Mid-Throughput Estimation of Cell Density within Diverse Cortical Layers. | Sekar, Aarthi; Sanches, Thiago M; Hino, Keiko; Kumar, Matangi; Wang, Juliann; Ha, Elisa; Durbin-Johnson, Blythe; Simó, Sergi; Dennis, Megan Y | eNeuro | 34725102 | 2021 Nov-Dec |
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| Spatially resolved transcriptomics reveals the architecture of the tumor-microenvironment interface. | Hunter, Miranda V; Moncada, Reuben; Weiss, Joshua M; Yanai, Itai; White, Richard M | Nature communications | 34725363 | 2021 11 01 |
| Single-cell chromatin state analysis with Signac. | Stuart, Tim; Srivastava, Avi; Madad, Shaista; Lareau, Caleb A; Satija, Rahul | Nature methods | 34725479 | 2021 Nov |
| Biosynthesis of triacsin featuring an N-hydroxytriazene pharmacophore. | Del Rio Flores, Antonio; Twigg, Frederick F; Du, Yongle; Cai, Wenlong; Aguirre, Daniel Q; Sato, Michio; Dror, Moriel J; Narayanamoorthy, Maanasa; Geng, Jiaxin; Zill, Nicholas A; Zhai, Rui; Zhang, Wenjun | Nature chemical biology | 34725510 | 2021 Dec |
| An Optogenetic Tool to Raise Intracellular pH in Single Cells and Drive Localized Membrane Dynamics. | Donahue, Caitlin E T; Siroky, Michael D; White, Katharine A | Journal of the American Chemical Society | 34726911 | 2021 Nov 17 |
| Transcriptional and anatomical diversity of medium spiny neurons in the primate striatum. | He, Jing; Kleyman, Michael; Chen, Jianjiao; Alikaya, Aydin; Rothenhoefer, Kathryn M; Ozturk, Bilge Esin; Wirthlin, Morgan; Bostan, Andreea C; Fish, Kenneth; Byrne, Leah C; Pfenning, Andreas R; Stauffer, William R | Current biology : CB | 34727523 | 2021 Oct 28 |
| Dissecting mammalian spermatogenesis using spatial transcriptomics. | Chen, Haiqi; Murray, Evan; Sinha, Anubhav; Laumas, Anisha; Li, Jilong; Lesman, Daniel; Nie, Xichen; Hotaling, Jim; Guo, Jingtao; Cairns, Bradley R; Macosko, Evan Z; Cheng, C Yan; Chen, Fei | Cell reports | 34731600 | 2021 Nov 02 |
| Epithelial-myeloid exchange of MHC class II constrains immunity and microbiota composition. | Stephens, W Zac; Kubinak, Jason L; Ghazaryan, Arevik; Bauer, Kaylyn M; Bell, Rickesha; Buhrke, Kate; Chiaro, Tyson R; Weis, Allison M; Tang, William W; Monts, Josh K; Soto, Ray; Ekiz, H Atakan; O'Connell, Ryan M; Round, June L | Cell reports | 34731608 | 2021 11 02 |
| The histone chaperone FACT facilitates heterochromatin spreading by regulating histone turnover and H3K9 methylation states. | Murawska, Magdalena; Greenstein, R A; Schauer, Tamas; Olsen, Karl C F; Ng, Henry; Ladurner, Andreas G; Al-Sady, Bassem; Braun, Sigurd | Cell reports | 34731638 | 2021 Nov 02 |
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| Replication timing analysis in polyploid cells reveals Rif1 uses multiple mechanisms to promote underreplication in Drosophila. | Das, Souradip; Caballero, Madison; Kolesnikova, Tatyana; Zhimulev, Igor; Koren, Amnon; Nordman, Jared | Genetics | 34740250 | 2021 11 05 |
| Amniotic fluid stabilized lipid nanoparticles for in utero intra-amniotic mRNA delivery. | Swingle, Kelsey L; Billingsley, Margaret M; Bose, Sourav K; White, Brandon; Palanki, Rohan; Dave, Apeksha; Patel, Savan K; Gong, Ningqiang; Hamilton, Alex G; Alameh, Mohamad-Gabriel; Weissman, Drew; Peranteau, William H; Mitchell, Michael J | Journal of controlled release : official journal of the Controlled Release Society | 34742747 | 2022 Jan |
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| Molecular Mechanisms and Evolutionary Consequences of Spore Killers in Ascomycetes. | Zanders, Sarah; Johannesson, Hanna | Microbiology and molecular biology reviews : MMBR | 34756084 | 2021 12 15 |
| Dietary palmitic acid promotes a prometastatic memory via Schwann cells. | Pascual, Gloria; Domínguez, Diana; Elosúa-Bayes, Marc; Beckedorff, Felipe; Laudanna, Carmelo; Bigas, Claudia; Douillet, Delphine; Greco, Carolina; Symeonidi, Aikaterini; Hernández, Inmaculada; Gil, Sara Ruiz; Prats, Neus; Bescós, Coro; Shiekhattar, Ramin; Amit, Moran; Heyn, Holger; Shilatifard, Ali; Benitah, Salvador Aznar | Nature | 34759321 | 2021 11 |
| A Multifunctional Neutralizing Antibody-Conjugated Nanoparticle Inhibits and Inactivates SARS-CoV-2. | Cai, Xiaolei; Chen, Min; Prominski, Aleksander; Lin, Yiliang; Ankenbruck, Nicholas; Rosenberg, Jillian; Nguyen, Mindy; Shi, Jiuyun; Tomatsidou, Anastasia; Randall, Glenn; Missiakas, Dominique; Fung, John; Chang, Eugene B; Penaloza-MacMaster, Pablo; Tian, Bozhi; Huang, Jun | Advanced science (Weinheim, Baden-Wurttemberg, Germany) | 34761549 | 2022 01 |
| Vesicle encapsulation stabilizes intermolecular association and structure formation of functional RNA and DNA. | Peng, Huan; Lelievre, Amandine; Landenfeld, Katharina; Müller, Sabine; Chen, Irene A | Current biology : CB | 34762821 | 2022 Jan 10 |
| Design and implementation of a microfluidic device capable of temporal growth factor delivery reveal filtering capabilities of the EGFR/ERK pathway. | Krause, Harris B; Bondarowicz, Hanna; Karls, Alexis L; McClean, Megan N; Kreeger, Pamela K | APL bioengineering | 34765858 | 2021 Dec |
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| Enzymatic Synthesis of Diverse Heterocycles by a Noncanonical Nonribosomal Peptide Synthetase. | Morgan, Gina L; Li, Kelin; Crawford, Drake M; Aubé, Jeffrey; Li, Bo | ACS chemical biology | 34767712 | 2021 12 17 |
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| Large-scale integration of single-cell transcriptomic data captures transitional progenitor states in mouse skeletal muscle regeneration. | McKellar, David W; Walter, Lauren D; Song, Leo T; Mantri, Madhav; Wang, Michael F Z; De Vlaminck, Iwijn; Cosgrove, Benjamin D | Communications biology | 34773081 | 2021 Nov 12 |
| FGFR2-IIIb Expression by Immunohistochemistry Has High Specificity in Cholangiocarcinoma with FGFR2 Genomic Alterations. | Uson Junior, Pedro Luiz Serrano; DeLeon, Thomas T; Bogenberger, James M; Pai, Rish K; Kosiorek, Heidi E; Yin, Jun; Ahn, Daniel H; Sonbol, Mohammad Bassam; Bekaii-Saab, Tanios; Mansfield, Aaron S; Buetow, Kenneth; Gores, Gregory J; Smoot, Rory; Vasmatzis, | Digestive diseases and sciences | 34773565 | 2022 08 |
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| Directional reorientation of migrating neutrophils is limited by suppression of receptor input signaling at the cell rear through myosin II activity. | Hadjitheodorou, Amalia; Bell, George R R; Ellett, Felix; Shastry, Shashank; Irimia, Daniel; Collins, Sean R; Theriot, Julie A | Nature communications | 34785640 | 2021 11 16 |
| Optogenetic control of receptors reveals distinct roles for actin- and Cdc42-dependent negative signals in chemotactic signal processing. | Bell, George R R; Rincón, Esther; Akdoğan, Emel; Collins, Sean R | Nature communications | 34785668 | 2021 11 16 |
| Stability of extemporaneously prepared preservative-free methylphenidate 5 mg/mL intravenous solution. | Barra, Megan E; Edlow, Brian L; Lund, James T; DeSanctis, Katherine S; Vetrano, John; Reilly-Tremblay, Cherylann; Zhang, Edlyn R; Bodien, Yelena G; Brown, Emery N; Solt, Ken | American journal of health-system pharmacy : AJHP : official journal of the American Society of Health-System Pharmacists | 34788364 | 2022 02 18 |
| Flexible simultaneous mesoscale two-photon imaging of neural activity at high speeds. | Clough, Mitchell; Chen, Ichun Anderson; Park, Seong-Wook; Ahrens, Allison M; Stirman, Jeffrey N; Smith, Spencer L; Chen, Jerry L | Nature communications | 34789730 | 2021 11 17 |
| Mechanical forces drive a reorientation cascade leading to biofilm self-patterning. | Nijjer, Japinder; Li, Changhao; Zhang, Qiuting; Lu, Haoran; Zhang, Sulin; Yan, Jing | Nature communications | 34789754 | 2021 11 17 |
| Reverse-translational identification of a cerebellar satiation network. | Low, Aloysius Y T; Goldstein, Nitsan; Gaunt, Jessica R; Huang, Kuei-Pin; Zainolabidin, Norliyana; Yip, Alaric K K; Carty, Jamie R E; Choi, Ju Y; Miller, Alekso M; Ho, Helen S T; Lenherr, Clara; Baltar, Nicholas; Azim, Eiman; Sessions, October M; Ch'ng, Toh Hean; Bruce, Amanda S; Martin, Laura E; Halko, Mark A; Brady Jr, Roscoe O; Holsen, Laura M; Alhadeff, Amber L; Chen, Albert I; Betley, J Nicholas | Nature | 34789878 | 2021 12 |
| Biosynthesis of fluopsin C, a copper-containing antibiotic from Pseudomonas aeruginosa. | Patteson, Jon B; Putz, Andrew T; Tao, Lizhi; Simke, William C; Bryant 3rd, L Henry; Britt, R David; Li, Bo | Science (New York, N.Y.) | 34793213 | 2021 11 19 |
| A student-centered seminar course as a complementary approach to a traditional journal club. | Rogers, Alexandra; Toledano, Michael; Hubbard, Elizabeth; Macchia, Desiree; Hui, May; Beier, Kevin T | Advances in physiology education | 34793264 | 2021 Nov 18 |
| Identification of astroglia-like cardiac nexus glia that are critical regulators of cardiac development and function. | Kikel-Coury, Nina L; Brandt, Jacob P; Correia, Isabel A; O'Dea, Michael R; DeSantis, Dana F; Sterling, Felicity; Vaughan, Kevin; Ozcebe, Gulberk; Zorlutuna, Pinar; Smith, Cody J | PLoS biology | 34793438 | 2021 Nov |
| Native mass spectrometry-based metabolomics identifies metal-binding compounds. | Aron, Allegra T; Petras, Daniel; Schmid, Robin; Gauglitz, Julia M; Büttel, Isabell; Antelo, Luis; Zhi, Hui; Nuccio, Sean-Paul; Saak, Christina C; Malarney, Kien P; Thines, Eckhard; Dutton, Rachel J; Aluwihare, Lihini I; Raffatellu, Manuela; Dorrestein, Pieter C | Nature chemistry | 34795435 | 2022 01 |
| Cell Chirality as a Novel Measure for Cytotoxicity. | Zhang, Haokang; Wan, Leo Q | Advanced biology | 34796704 | 2022 01 |
| Heat-Mediated Optical Manipulation. | Chen, Zhihan; Li, Jingang; Zheng, Yuebing | Chemical reviews | 34797041 | 2022 02 09 |
| Implementing Digital-Waveform Technology for Extended m/z Range Operation on a Native Dual-Quadrupole FT-IM-Orbitrap Mass Spectrometer. | McCabe, Jacob W; Jones, Benjamin J; Walker, Thomas E; Schrader, Robert L; Huntley, Adam P; Lyu, Jixing; Hoffman, Nathan M; Anderson, Gordon A; Reilly, Peter T A; Laganowsky, Arthur; Wysocki, Vicki H; Russell, David H | Journal of the American Society for Mass Spectrometry | 34797072 | 2021 Dec 01 |
| A perception-based nanosensor platform to detect cancer biomarkers. | Yaari, Zvi; Yang, Yoona; Apfelbaum, Elana; Cupo, Christian; Settle, Alex H; Cullen, Quinlan; Cai, Winson; Roche, Kara Long; Levine, Douglas A; Fleisher, Martin; Ramanathan, Lakshmi; Zheng, Ming; Jagota, Anand; Heller, Daniel A | Science advances | 34797711 | 2021 Nov 19 |
| The genetic architecture of DNA replication timing in human pluripotent stem cells. | Ding, Qiliang; Edwards, Matthew M; Wang, Ning; Zhu, Xiang; Bracci, Alexa N; Hulke, Michelle L; Hu, Ya; Tong, Yao; Hsiao, Joyce; Charvet, Christine J; Ghosh, Sulagna; Handsaker, Robert E; Eggan, Kevin; Merkle, Florian T; Gerhardt, Jeannine; Egli, Dieter; Clark, Andrew G; Koren, Amnon | Nature communications | 34799581 | 2021 Nov 19 |
| Discovering new biology with drug-resistance alleles. | Freedy, Allyson M; Liau, Brian B | Nature chemical biology | 34799733 | 2021 12 |
| The structure of the human cell cycle. | Stallaert, Wayne; Kedziora, Katarzyna M; Taylor, Colin D; Zikry, Tarek M; Ranek, Jolene S; Sobon, Holly K; Taylor, Sovanny R; Young, Catherine L; Cook, Jeanette G; Purvis, Jeremy E | Cell systems | 34800361 | 2022 03 16 |
| Metabolic adaptation to the chronic loss of Ca2+ signaling induced by KO of IP3 receptors or the mitochondrial Ca2+ uniporter. | Young, Michael P; Schug, Zachary T; Booth, David M; Yule, David I; Mikoshiba, Katsuhiko; Hajnόczky, Gyӧrgy; Joseph, Suresh K | The Journal of biological chemistry | 34801549 | 2022 Jan |
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| Mapping enzyme catalysis with metabolic biosensing. | Xu, Linfeng; Chang, Kai-Chun; Payne, Emory M; Modavi, Cyrus; Liu, Leqian; Palmer, Claire M; Tao, Nannan; Alper, Hal S; Kennedy, Robert T; Cornett, Dale S; Abate, Adam R | Nature communications | 34815408 | 2021 Nov 23 |
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| Hippocampal neurons' cytosolic and membrane-bound ribosomal transcript profiles are differentially regulated by learning and subsequent sleep. | Delorme, James; Wang, Lijing; Kodoth, Varna; Wang, Yifan; Ma, Jingqun; Jiang, Sha; Aton, Sara J | Proceedings of the National Academy of Sciences of the United States of America | 34819370 | 2021 11 30 |
| The human microbiome encodes resistance to the antidiabetic drug acarbose. | Balaich, Jared; Estrella, Michael; Wu, Guojun; Jeffrey, Philip D; Biswas, Abhishek; Zhao, Liping; Korennykh, Alexei; Donia, Mohamed S | Nature | 34819672 | 2021 12 |
| Substrate stiffening promotes VEGF-A functions via the PI3K/Akt/mTOR pathway. | Husain, Amjad; Khadka, Arogya; Ehrlicher, Allen; Saint-Geniez, Magali; Krishnan, Ramaswamy | Biochemical and biophysical research communications | 34823219 | 2022 01 01 |
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| IRF3 inhibits IFN-γ-mediated restriction of intracellular pathogens in macrophages independently of IFNAR. | Maciag, Karolina; Raychowdhury, Raktima; Smith, Karen; Schneider, Alexis M; Coers, Jörn; Mumbach, Maxwell R; Schwartz, Schraga; Hacohen, Nir | Journal of leukocyte biology | 34826345 | 2022 08 |
| 3D Organoids: An Untapped Platform for Studying Host-Microbiome Interactions in Esophageal Cancers. | Flashner, Samuel; Yan, Kelley S; Nakagawa, Hiroshi | Microorganisms | 34835308 | 2021 Oct 20 |
| Single-Cell Technologies to Study Phenotypic Heterogeneity and Bacterial Persisters. | Hare, Patricia J; LaGree, Travis J; Byrd, Brandon A; DeMarco, Angela M; Mok, Wendy W K | Microorganisms | 34835403 | 2021 Nov 01 |
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| Development of allogeneic HSC-engineered iNKT cells for off-the-shelf cancer immunotherapy. | Li, Yan-Ruide; Zhou, Yang; Kim, Yu Jeong; Zhu, Yanni; Ma, Feiyang; Yu, Jiaji; Wang, Yu-Chen; Chen, Xianhui; Li, Zhe; Zeng, Samuel; Wang, Xi; Lee, Derek; Ku, Josh; Tsao, Tasha; Hardoy, Christian; Huang, Jie; Cheng, Donghui; Montel-Hagen, Amélie; Seet, Christopher S; Crooks, Gay M; Larson, Sarah M; Sasine, Joshua P; Wang, Xiaoyan; Pellegrini, Matteo; Ribas, Antoni; Kohn, Donald B; Witte, Owen; Wang, Pin; Yang, Lili | Cell reports. Medicine | 34841295 | 2021 11 16 |
| Melanopsin phototransduction: beyond canonical cascades. | Contreras, Ely; Nobleman, Alexis P; Robinson, Phyllis R; Schmidt, Tiffany M | The Journal of experimental biology | 34842918 | 2021 12 01 |
| A metagenomic DNA sequencing assay that is robust against environmental DNA contamination. | Mzava, Omary; Cheng, Alexandre Pellan; Chang, Adrienne; Smalling, Sami; Kounatse, Liz-Audrey Djomnang; Lenz, Joan; Longman, Randy; Steadman, Amy; Salvatore, Mirella; Suthanthiran, Manikkam; Lee, John R; Mason, Christopher E; Dadhania, Darshana; De Vlaminck, Iwijn | bioRxiv : the preprint server for biology | 34845444 | 2021 Nov 23 |
| Insight into the Phospholipid-Binding Preferences of Kir3.4. | Qiao, Pei; Schrecke, Samantha; Lyu, Jixing; Zhu, Yun; Zhang, Tianqi; Benavides, Amanda; Laganowsky, Arthur | Biochemistry | 34846128 | 2021 12 21 |
| An autoimmune stem-like CD8 T cell population drives type 1 diabetes. | Gearty, Sofia V; Dündar, Friederike; Zumbo, Paul; Espinosa-Carrasco, Gabriel; Shakiba, Mojdeh; Sanchez-Rivera, Francisco J; Socci, Nicholas D; Trivedi, Prerak; Lowe, Scott W; Lauer, Peter; Mohibullah, Neeman; Viale, Agnes; DiLorenzo, Teresa P; Betel, Doron; Schietinger, Andrea | Nature | 34847567 | 2022 02 |
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| Cyclin F drives proliferation through SCF-dependent degradation of the retinoblastoma-like tumor suppressor p130/RBL2. | Enrico, Taylor P; Stallaert, Wayne; Wick, Elizaveta T; Ngoi, Peter; Wang, Xianxi; Rubin, Seth M; Brown, Nicholas G; Purvis, Jeremy E; Emanuele, Michael J | eLife | 34851822 | 2021 12 01 |
| Association of clonal hematopoiesis with chronic obstructive pulmonary disease. | Miller, Peter G; Qiao, Dandi; Rojas-Quintero, Joselyn; Honigberg, Michael C; Sperling, Adam S; Gibson, Christopher J; Bick, Alexander G; Niroula, Abhishek; McConkey, Marie E; Sandoval, Brittany; Miller, Brian C; Shi, Weiwei; Viswanathan, Kaushik; Leventha | Blood | 34855941 | 2022 01 20 |
| A multi-functional microfluidic device compatible with widefield and light sheet microscopy. | Moore, Regan P; O'Shaughnessy, Ellen C; Shi, Yu; Nogueira, Ana T; Heath, Katelyn M; Hahn, Klaus M; Legant, Wesley R | Lab on a chip | 34859808 | 2021 12 21 |
| Coordinated mis-splicing of TMEM14C and ABCB7 causes ring sideroblast formation in SF3B1-mutant myelodysplastic syndrome. | Clough, Courtnee A; Pangallo, Joseph; Sarchi, Martina; Ilagan, Janine O; North, Khrystyna; Bergantinos, Rochelle; Stolla, Massiel Chavez; Naru, Jasmine; Nugent, Patrick; Kim, Eunhee; Stirewalt, Derek L; Subramaniam, Arvind R; Abdel-Wahab, Omar; Abkowitz, Janis L; Bradley, Robert K; Doulatov, Sergei | Blood | 34861039 | 2021 Dec 03 |
| Targeting cancer metabolism in the era of precision oncology. | Stine, Zachary E; Schug, Zachary T; Salvino, Joseph M; Dang, Chi V | Nature reviews. Drug discovery | 34862480 | 2022 Feb |
| Single-cell multiomics reveals increased plasticity, resistant populations, and stem-cell-like blasts in KMT2A-rearranged leukemia. | Chen, Changya; Yu, Wenbao; Alikarami, Fatemeh; Qiu, Qi; Chen, Chia-Hui; Flournoy, Jennifer; Gao, Peng; Uzun, Yasin; Fang, Li; Davenport, James W; Hu, Yuxuan; Zhu, Qin; Wang, Kai; Libbrecht, Clara; Felmeister, Alex; Rozich, Isaiah; Ding, Yang-Yang; Hunger, Stephen P; Felix, Carolyn A; Wu, Hao; Brown, Patrick A; Guest, Erin M; Barrett, David M; Bernt, Kathrin M; Tan, Kai | Blood | 34864916 | 2022 Apr 07 |
| The Parental Dilemma: How Evolution of Diverse Strategies for Infant Care Informs Social Behavior Circuits. | Autry, Anita E; O'Connell, Lauren A | Frontiers in neural circuits | 34867211 | 2021 |
| Gating and Regulatory Mechanisms of TMEM16 Ion Channels and Scramblases. | Le, Son C; Liang, Pengfei; Lowry, Augustus J; Yang, Huanghe | Frontiers in physiology | 34867487 | 2021 |
| Considerations and recent advances in nanoscale interfaces with neuronal and cardiac networks. | Tchoe, Youngbin; Lee, Jihwan; Liu, Ren; Bourhis, Andrew M; Vatsyayan, Ritwik; Tonsfeldt, Karen J; Dayeh, Shadi A | Applied physics reviews | 34868443 | 2021 Dec |
| Improving the Performance of Risk Adjustment Systems: Constrained Regressions, Reinsurance, and Variable Selection. | McGuire, Thomas G; Zink, Anna L; Rose, Sherri | American journal of health economics | 34869790 | 2021 |
| Pi-stacking Enhances Stability, Scalability of Formation, Control over Flexibility and Circulation Time of Polymeric Filaments. | Li, Sophia; Bobbala, Sharan; Vincent, Michael P; Modak, Mallika; Liu, Yugang; Scott, Evan A | Advanced nanobiomed research | 34870281 | 2021 Nov |
| Targeting the Extracellular Matrix in Traumatic Brain Injury Increases Signal Generation from an Activity-Based Nanosensor. | Kandell, Rebecca M; Kudryashev, Julia A; Kwon, Ester J | ACS nano | 34870408 | 2021 12 28 |
| Induction of Human Naïve Pluripotency Using 5i/L/A Medium. | Fischer, Laura A; Khan, Shafqat A; Theunissen, Thorold W | Methods in molecular biology (Clifton, N.J.) | 34870827 | 2022 |
| Generating Trophoblast Stem Cells from Human Naïve Pluripotent Stem Cells. | Dong, Chen; Theunissen, Thorold W | Methods in molecular biology (Clifton, N.J.) | 34870832 | 2022 |
| Therapeutic Interventions Targeting Innate Immune Receptors: A Balancing Act. | Cao, Xujun; Cordova, Anthony F; Li, Lingyin | Chemical reviews | 34870969 | 2022 Feb 09 |
| Shiftless inhibits flavivirus replication in vitro and is neuroprotective in a mouse model of Zika virus pathogenesis. | Hanners, Natasha W; Mar, Katrina B; Boys, Ian N; Eitson, Jennifer L; De La Cruz-Rivera, Pamela C; Richardson, R Blake; Fan, Wenchun; Wight-Carter, Mary; Schoggins, John W | Proceedings of the National Academy of Sciences of the United States of America | 34873063 | 2021 12 07 |
| The germinal centre B cell response to SARS-CoV-2. | Laidlaw, Brian J; Ellebedy, Ali H | Nature reviews. Immunology | 34873279 | 2022 01 |
| A large-scale systematic survey of SARS-CoV-2 antibodies reveals recurring molecular features. | Wang, Yiquan; Yuan, Meng; Peng, Jian; Wilson, Ian A; Wu, Nicholas C | bioRxiv : the preprint server for biology | 34873599 | 2021 Nov 30 |
| Analysis of subcellular transcriptomes by RNA proximity labeling with Halo-seq. | Engel, Krysta L; Lo, Hei-Yong G; Goering, Raeann; Li, Ying; Spitale, Robert C; Taliaferro, J Matthew | Nucleic acids research | 34875090 | 2022 Feb 28 |
| Entropy-regularized deconvolution of cellular cryotransmission electron tomograms. | Croxford, Matthew; Elbaum, Michael; Arigovindan, Muthuvel; Kam, Zvi; Agard, David; Villa, Elizabeth; Sedat, John | Proceedings of the National Academy of Sciences of the United States of America | 34876518 | 2021 12 14 |
| Antigenic evolution of human influenza H3N2 neuraminidase is constrained by charge balancing. | Wang, Yiquan; Lei, Ruipeng; Nourmohammad, Armita; Wu, Nicholas C | eLife | 34878407 | 2021 12 08 |
| Structure and mechanism of the SGLT family of glucose transporters. | Han, Lei; Qu, Qianhui; Aydin, Deniz; Panova, Ouliana; Robertson, Michael J; Xu, Yan; Dror, Ron O; Skiniotis, Georgios; Feng, Liang | Nature | 34880492 | 2022 01 |
| Structural insights into metazoan pretargeting GET complexes. | Keszei, Alexander F A; Yip, Matthew C J; Hsieh, Ta-Chien; Shao, Sichen | Nature structural & molecular biology | 34887561 | 2021 12 |
| AAV capsid variants with brain-wide transgene expression and decreased liver targeting after intravenous delivery in mouse and marmoset. | Goertsen, David; Flytzanis, Nicholas C; Goeden, Nick; Chuapoco, Miguel R; Cummins, Alexander; Chen, Yijing; Fan, Yingying; Zhang, Qiangge; Sharma, Jitendra; Duan, Yangyang; Wang, Liping; Feng, Guoping; Chen, Yu; Ip, Nancy Y; Pickel, James; Gradinaru, Viviana | Nature neuroscience | 34887588 | 2022 01 |
| A poly(ethylene glycol) three-dimensional bone marrow hydrogel. | Jansen, Lauren E; Kim, Hyuna; Hall, Christopher L; McCarthy, Thomas P; Lee, Michael J; Peyton, Shelly R | Biomaterials | 34890973 | 2022 Jan |
| Diverse mating phenotypes impact the spread of wtf meiotic drivers in Schizosaccharomyces pombe. | López Hernández, José Fabricio; Helston, Rachel M; Lange, Jeffrey J; Billmyre, R Blake; Schaffner, Samantha H; Eickbush, Michael T; McCroskey, Scott; Zanders, Sarah E | eLife | 34895466 | 2021 12 13 |
| Volumetric super-resolution imaging by serial ultrasectioning and stochastic optical reconstruction microscopy in mouse neural tissue. | Vatan, Tarlan; Minehart, Jacqueline A; Zhang, Chenghang; Agarwal, Vatsal; Yang, Jerry; Speer, Colenso M | STAR protocols | 34901889 | 2021 12 17 |
| An ionizable lipid toolbox for RNA delivery. | Han, Xuexiang; Zhang, Hanwen; Butowska, Kamila; Swingle, Kelsey L; Alameh, Mohamad-Gabriel; Weissman, Drew; Mitchell, Michael J | Nature communications | 34903741 | 2021 12 13 |
| Variants in ADD1 cause intellectual disability, corpus callosum dysgenesis, and ventriculomegaly in humans. | Qi, Cai; Feng, Irena; Costa, Ana Rita; Pinto-Costa, Rita; Neil, Jennifer E; Caluseriu, Oana; Li, Dong; Ganetzky, Rebecca D; Brasch-Andersen, Charlotte; Fagerberg, Christina; Hansen, Lars Kjærsgaard; Bupp, Caleb; Muraresku, Colleen Clarke; Ruan, Xiangbin; Kang, Bowei; Hu, Kaining; Zhong, Rong; Brites, Pedro; Bhoj, Elizabeth J; Hill, Robert Sean; Falk, Marni J; Hakonarson, Hakon; Kahle, Kristopher T; Sousa, Monica M; Walsh, Christopher A; Zhang, Xiaochang | Genetics in medicine : official journal of the American College of Medical Genetics | 34906466 | 2022 Feb |
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| Behaviour and interactions of proteins and peptides with and within membranes; from simple models to cellular membranes: general discussion. | Aguilar, Mibel; Al Nahas, Kareem; Barrera, Francisco; Bassereau, Patricia; Bastos, Margarida; Beales, Paul; Bechinger, Burkhard; Bonev, Boyan; Brand, Izabella; Chattopadhyay, Amitabha; DeGrado, William; Fuchs, Patrick; Garcia Saez, Ana J; Hoogenboom, Bart; Kapoor, Shobhna; Milán Rodríguez, Paula; Molloy, Justin; O'Shea, Paul; Pabst, Georg; Pal, Sreetama; Rice, Amy; Roux, Aurelien; Sanderson, John; Seddon, John; Tamm, Lukas K; Vijayakumar, Aishwarya | Faraday discussions | 34909817 | 2021 Dec 24 |
| Identification of RAS mutant biomarkers for EGFR inhibitor sensitivity using a systems biochemical approach. | McFall, Thomas; Stites, Edward C | Cell reports | 34910921 | 2021 12 14 |
| Controlling the polarization of chiral dipolar emission with a spherical dielectric nanoantenna. | Yao, Kan; Zheng, Yuebing | The Journal of chemical physics | 34911301 | 2021 Dec 14 |
| Nanoscale Structures and Materials from the Self-assembly of Polypeptides and DNA. | Bernal-Chanchavac, Julio; Al-Amin, Md; Stephanopoulos, Nicholas | Current topics in medicinal chemistry | 34911426 | 2022 |
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| Double stranded DNA breaks and genome editing trigger loss of ribosomal protein RPS27A. | Riepe, Celeste; Zelin, Elena; Frankino, Phillip A; Meacham, Zuriah A; Fernandez, Samantha G; Ingolia, Nicholas T; Corn, Jacob E | The FEBS journal | 34914197 | 2021 Dec 16 |
| Cheating the Cheater: Suppressing False-Positive Enrichment during Biosensor-Guided Biocatalyst Engineering. | Trivedi, Vikas D; Mohan, Karishma; Chappell, Todd C; Mays, Zachary J S; Nair, Nikhil U | ACS synthetic biology | 34914365 | 2022 01 21 |
| Musical instrument engagement in adolescence predicts verbal ability 4 years later: A twin and adoption study. | Gustavson, Daniel E; Friedman, Naomi P; Stallings, Michael C; Reynolds, Chandra A; Coon, Hilary; Corley, Robin P; Hewitt, John K; Gordon, Reyna L | Developmental psychology | 34914455 | 2021 Nov |
| Wisconsin dairy farm worker perceptions and practices related to antibiotic use, resistance, and infection prevention using a systems engineering framework. | Kates, Ashley E; Knobloch, Mary Jo; Konkel, Ali; Young, Amanda; Steinberger, Andrew; Shutske, John; Ruegg, Pamela L; Sethi, Ajay K; Goldberg, Tony; Leite de Campos, Juliana; Suen, Garret; Safdar, Nasia | PloS one | 34914704 | 2021 |
| Existing human mobility data sources poorly predicted the spatial spread of SARS-CoV-2 in Madagascar. | Ramiadantsoa, Tanjona; Metcalf, C Jessica E; Raherinandrasana, Antso Hasina; Randrianarisoa, Santatra; Rice, Benjamin L; Wesolowski, Amy; Randriatsarafara, Fidiniaina Mamy; Rasambainarivo, Fidisoa | Epidemics | 34915300 | 2022 03 |
| Design Principles for Compact, Backdrivable Actuation in Partial-Assist Powered Knee Orthoses. | Zhu, Hanqi; Nesler, Christopher; Divekar, Nikhil; Peddinti, Vamsi; Gregg, Robert D | IEEE/ASME transactions on mechatronics : a joint publication of the IEEE Industrial Electronics Society and the ASME Dynamic Systems and Control Division | 34916771 | 2021 Dec |
| Confocal Imaging of Single-Cell Signaling in Orthotopic Models of Ovarian Cancer. | Matvey, Dylan O; Ng, Thomas S C; Miller, Miles A | Methods in molecular biology (Clifton, N.J.) | 34918302 | 2022 |
| Scale-type-specific requirement for the mosquito Aedes aegypti Spindle-F homologue by regulating microtubule organization. | Djokic, Sanja; Bakhrat, Anna; Li, Ming; Akbari, Omar S; Abdu, Uri | Insect molecular biology | 34919304 | 2022 Apr |
| Tumor immunology CRISPR screening: present, past, and future. | Dong, Matthew B; Tang, Kaiyuan; Zhou, Xiaoyu; Zhou, Jingjia J; Chen, Sidi | Trends in cancer | 34920978 | 2022 Mar |
| Polymer Chemistry for Haptics, Soft Robotics, and Human-Machine Interfaces. | Schara, Steven; Blau, Rachel; Church, Derek C; Pokorski, Jonathan K; Lipomi, Darren J | Advanced functional materials | 34924911 | 2021 Sep 23 |
| A proximity labeling protocol to probe proximity interactions in C. elegans. | Sanchez, Ariana D; Feldman, Jessica L | STAR protocols | 34927095 | 2021 12 17 |
| A Change from Kinetic to Thermodynamic Control Enables trans-Selective Stereochemical Editing of Vicinal Diols. | Zhang, Yu-An; Gu, Xin; Wendlandt, Alison E | Journal of the American Chemical Society | 34928134 | 2022 01 12 |
| Entropy in the Molecular Recognition of Membrane Protein-Lipid Interactions. | Qiao, Pei; Schrecke, Samantha; Walker, Thomas; McCabe, Jacob W; Lyu, Jixing; Zhu, Yun; Zhang, Tianqi; Kumar, Smriti; Clemmer, David; Russell, David H; Laganowsky, Arthur | The journal of physical chemistry letters | 34928154 | 2021 Dec 30 |
| Human Spinal Organoid-on-a-Chip to Model Nociceptive Circuitry for Pain Therapeutics Discovery. | Ao, Zheng; Cai, Hongwei; Wu, Zhuhao; Krzesniak, Jonathan; Tian, Chunhui; Lai, Yvonne Y; Mackie, Ken; Guo, Feng | Analytical chemistry | 34928595 | 2022 Jan 18 |
| GuPPy, a Python toolbox for the analysis of fiber photometry data. | Scientific reports | 34930955 | 2021 12 20 | |
| Anthrax toxins regulate pain signaling and can deliver molecular cargoes into ANTXR2+ DRG sensory neurons. | Yang, Nicole J; Isensee, Jörg; Neel, Dylan V; Quadros, Andreza U; Zhang, Han-Xiong Bear; Lauzadis, Justas; Liu, Sai Man; Shiers, Stephanie; Belu, Andreea; Palan, Shilpa; Marlin, Sandra; Maignel, Jacquie; Kennedy-Curran, Angela; Tong, Victoria S; Moayeri, Mahtab; Röderer, Pascal; Nitzsche, Anja; Lu, Mike; Pentelute, Bradley L; Brüstle, Oliver; Tripathi, Vineeta; Foster, Keith A; Price, Theodore J; Collier, R John; Leppla, Stephen H; Puopolo, Michelino; Bean, Bruce P; Cunha, Thiago M; Hucho, Tim; Chiu, Isaac M | Nature neuroscience | 34931070 | 2022 02 |
| Variable-Temperature Native Mass Spectrometry for Studies of Protein Folding, Stabilities, Assembly, and Molecular Interactions. | Laganowsky, Arthur; Clemmer, David E; Russell, David H | Annual review of biophysics | 34932911 | 2022 May 09 |
| Synthesis and application of POLYseq for profiling human liver organoids. | Dunn, Andrew W; Cai, Yuqi; Iwasawa, Kentaro; Kimura, Masaki; Takebe, Takanori | STAR protocols | 34934958 | 2021 12 17 |
| TCR signal strength defines distinct mechanisms of T cell dysfunction and cancer evasion. | Shakiba, Mojdeh; Zumbo, Paul; Espinosa-Carrasco, Gabriel; Menocal, Laura; Dündar, Friederike; Carson, Sandra E; Bruno, Emmanuel M; Sanchez-Rivera, Francisco J; Lowe, Scott W; Camara, Steven; Koche, Richard P; Reuter, Vincent P; Socci, Nicholas D; Whitlock, Benjamin; Tamzalit, Fella; Huse, Morgan; Hellmann, Matthew D; Wells, Daniel K; Defranoux, Nadine A; Betel, Doron; Philip, Mary; Schietinger, Andrea | The Journal of experimental medicine | 34935874 | 2022 02 07 |
| Rational Design of Hydrogel Networks with Dynamic Mechanical Properties to Mimic Matrix Remodeling. | Wiley, Katherine L; Sutherland, Bryan P; Ogunnaike, Babatunde A; Kloxin, April M | Advanced healthcare materials | 34936227 | 2022 04 |
| Multiplexed Detection of Secreted Cytokines at near-Molecular Resolution Elucidates Macrophage Polarization Heterogeneity. | Herrera, Vanessa; Hsu, Ssu-Chieh Joseph; Naveen, Veena Y; Liu, Wendy F; Haun, Jered B | Analytical chemistry | 34936345 | 2022 01 18 |
| Stress ball morphogenesis: How the lizard builds its lung. | Palmer, Michael A; Nerger, Bryan A; Goodwin, Katharine; Sudhakar, Anvitha; Lemke, Sandra B; Ravindran, Pavithran T; Toettcher, Jared E; Košmrlj, Andrej; Nelson, Celeste M | Science advances | 34936466 | 2021 Dec 24 |
| Virally encoded connectivity transgenic overlay RNA sequencing (VECTORseq) defines projection neurons involved in sensorimotor integration. | Cheung, Victoria; Chung, Philip; Bjorni, Max; Shvareva, Varvara A; Lopez, Yesenia C; Feinberg, Evan H | Cell reports | 34936877 | 2021 12 21 |
| TET deficiency perturbs mature B cell homeostasis and promotes oncogenesis associated with accumulation of G-quadruplex and R-loop structures. | Shukla, Vipul; Samaniego-Castruita, Daniela; Dong, Zhen; González-Avalos, Edahí; Yan, Qingqing; Sarma, Kavitha; Rao, Anjana | Nature immunology | 34937926 | 2022 01 |
| Modulation of sensory perception by hydrogen peroxide enables Caenorhabditis elegans to find a niche that provides both food and protection from hydrogen peroxide. | Schiffer, Jodie A; Stumbur, Stephanie V; Seyedolmohadesin, Maedeh; Xu, Yuyan; Serkin, William T; McGowan, Natalie G; Banjo, Oluwatosin; Torkashvand, Mahdi; Lin, Albert; Hosea, Ciara N; Assié, Adrien; Samuel, Buck S; O'Donnell, Michael P; Venkatachalam, Vivek; Apfeld, Javier | PLoS pathogens | 34941962 | 2021 12 |
| Aging disrupts circadian gene regulation and function in macrophages. | Nature immunology | 34949832 | 2022 02 | |
| Precise genome editing across kingdoms of life using retron-derived DNA. | Lopez, Santiago C; Crawford, Kate D; Lear, Sierra K; Bhattarai-Kline, Santi; Shipman, Seth L | Nature chemical biology | 34949838 | 2022 02 |
| Targeted drug delivery strategies for precision medicines. | Manzari, Mandana T; Shamay, Yosi; Kiguchi, Hiroto; Rosen, Neal; Scaltriti, Maurizio; Heller, Daniel A | Nature reviews. Materials | 34950512 | 2021 Apr |
| Association Between Immune Dysfunction and COVID-19 Breakthrough Infection After SARS-CoV-2 Vaccination in the US. | JAMA internal medicine | 34962505 | 2022 02 01 | |
| Enhanced Photoacoustic Detection of Heparin in Whole Blood via Melanin Nanocapsules Carrying Molecular Agents. | Yim, Wonjun; Takemura, Kathryn; Zhou, Jiajing; Zhou, Jingcheng; Jin, Zhicheng; Borum, Raina M; Xu, Ming; Cheng, Yong; He, Tengyu; Penny, William; Miller 3rd, Bill R; Jokerst, Jesse V | ACS nano | 34962765 | 2021 Dec 28 |
| Substratum stiffness regulates Erk signaling dynamics through receptor-level control. | Farahani, Payam E; Lemke, Sandra B; Dine, Elliot; Uribe, Giselle; Toettcher, Jared E; Nelson, Celeste M | Cell reports | 34965432 | 2021 12 28 |
| Using geospatial models to map zero-dose children: factors associated with zero-dose vaccination status before and after a mass measles and rubella vaccination campaign in Southern province, Zambia. | Arambepola, Rohan; Yang, Yangyupei; Hutchinson, Kyle; Mwansa, Francis Dien; Doherty, Julie Ann; Bwalya, Frazer; Ndubani, Phillimon; Musukwa, Gloria; Moss, William John; Wesolowski, Amy; Mutembo, Simon | BMJ global health | 34969682 | 2021 Dec |
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| Emerging 2D Nanomaterials for Biomedical Applications. | Murali, Aparna; Lokhande, Giriraj; Deo, Kaivalya A; Brokesh, Anna; Gaharwar, Akhilesh K | Materials today (Kidlington, England) | 34970073 | 2021 Nov |
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| Single cell transcriptomics in human osteoarthritis synovium and in silico deconvoluted bulk RNA sequencing. | Huang, Z Y; Luo, Z Y; Cai, Y R; Chou, C-H; Yao, M L; Pei, F X; Kraus, V B; Zhou, Z K | Osteoarthritis and cartilage | 34971754 | 2022 Mar |
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| Large-scale neural recordings call for new insights to link brain and behavior. | Urai, Anne E; Doiron, Brent; Leifer, Andrew M; Churchland, Anne K | Nature neuroscience | 34980926 | 2022 01 |
| Vaccination with BNT162b2 reduces transmission of SARS-CoV-2 to household contacts in Israel. | Prunas, Ottavia; Warren, Joshua L; Crawford, Forrest W; Gazit, Sivan; Patalon, Tal; Weinberger, Daniel M; Pitzer, Virginia E | medRxiv : the preprint server for health sciences | 34981074 | 2021 Dec 20 |
| Early peanut introduction wins over the HLA-DQA1*01:02 allele in the interplay between environment and genetics. | Manohar, Monali; Nadeau, Kari Christine; Kasowski, Maya | The Journal of clinical investigation | 34981779 | 2022 01 04 |
| Comprehensive structure and functional adaptations of the yeast nuclear pore complex. | Akey, Christopher W; Singh, Digvijay; Ouch, Christna; Echeverria, Ignacia; Nudelman, Ilona; Varberg, Joseph M; Yu, Zulin; Fang, Fei; Shi, Yi; Wang, Junjie; Salzberg, Daniel; Song, Kangkang; Xu, Chen; Gumbart, James C; Suslov, Sergey; Unruh, Jay; Jaspersen, Sue L; Chait, Brian T; Sali, Andrej; Fernandez-Martinez, Javier; Ludtke, Steven J; Villa, Elizabeth; Rout, Michael P | Cell | 34982960 | 2022 01 20 |
| Four-dimensional nuclear speckle phase separation dynamics regulate proteostasis. | Dion, William; Ballance, Heather; Lee, Jane; Pan, Yinghong; Irfan, Saad; Edwards, Casey; Sun, Michelle; Zhang, Jing; Zhang, Xin; Liu, Silvia; Zhu, Bokai | Science advances | 34985945 | 2022 Jan 07 |
| Evaluation of CRISPR gene-editing tools in zebrafish. | Uribe-Salazar, José M; Kaya, Gulhan; Sekar, Aadithya; Weyenberg, KaeChandra; Ingamells, Cole; Dennis, Megan Y | BMC genomics | 34986794 | 2022 Jan 06 |
| Interleukin-1β secretion induced by mucosa-associated gut commensal bacteria promotes intestinal barrier repair. | Wu, Wan-Jung H; Kim, Myunghoo; Chang, Lin-Chun; Assie, Adrien; Saldana-Morales, Fatima B; Zegarra-Ruiz, Daniel F; Norwood, Kendra; Samuel, Buck S; Diehl, Gretchen E | Gut microbes | 34989321 | 2022 Jan-Dec |
| Central Nervous System Control of Glucose Homeostasis: A Therapeutic Target for Type 2 Diabetes? | Mirzadeh, Zaman; Faber, Chelsea L; Schwartz, Michael W | Annual review of pharmacology and toxicology | 34990204 | 2022 Jan 06 |
| Dense functional and molecular readout of a circuit hub in sensory cortex. | Condylis, Cameron; Ghanbari, Abed; Manjrekar, Nikita; Bistrong, Karina; Yao, Shenqin; Yao, Zizhen; Nguyen, Thuc Nghi; Zeng, Hongkui; Tasic, Bosiljka; Chen, Jerry L | Science (New York, N.Y.) | 34990233 | 2022 01 07 |
| Observation of robust energy transfer in the photosynthetic protein allophycocyanin using single-molecule pump-probe spectroscopy. | Moya, Raymundo; Norris, Audrey C; Kondo, Toru; Schlau-Cohen, Gabriela S | Nature chemistry | 34992285 | 2022 02 |
| Mucin-mimetic glycan arrays integrating machine learning for analyzing receptor pattern recognition by influenza A viruses. | Lucas, Taryn M; Gupta, Chitrak; Altman, Meghan O; Sanchez, Emi; Naticchia, Matthew R; Gagneux, Pascal; Singharoy, Abhishek; Godula, Kamil | Chem | 34993358 | 2021 Dec 09 |
| Ultrasound-mediated blood-brain barrier opening increases cell-free DNA in a time-dependent manner. | Zhang, Daniel Y; Gould, Andrew; Happ, Hannah C; Youngblood, Mark W; Dmello, Crismita; Kang, Seong Jae; Canney, Michael; Stupp, Roger; Carvill, Gemma L; Sonabend, Adam M | Neuro-oncology advances | 34993480 | 2021 Jan-Dec |
| 3D-printed flexible organic light-emitting diode displays. | Su, Ruitao; Park, Sung Hyun; Ouyang, Xia; Ahn, Song Ih; McAlpine, Michael C | Science advances | 34995118 | 2022 Jan 07 |
| Impact of close interpersonal contact on COVID-19 incidence: Evidence from 1 year of mobile device data. | Crawford, Forrest W; Jones, Sydney A; Cartter, Matthew; Dean, Samantha G; Warren, Joshua L; Li, Zehang Richard; Barbieri, Jacqueline; Campbell, Jared; Kenney, Patrick; Valleau, Thomas; Morozova, Olga | Science advances | 34995121 | 2022 Jan 07 |
| Anatomy promotes neutral coexistence of strains in the human skin microbiome. | Conwill, Arolyn; Kuan, Anne C; Damerla, Ravalika; Poret, Alexandra J; Baker, Jacob S; Tripp, A Delphine; Alm, Eric J; Lieberman, Tami D | Cell host & microbe | 34995483 | 2022 Feb 09 |
| Author Correction: Single-cell chromatin state analysis with Signac. | Nature methods | 34997233 | 2022 Feb | |
| NOD-like receptor protein 3 activation causes spontaneous inflammation and fibrosis that mimics human NASH. | Calcagno, David M; Chu, Angela; Gaul, Susanne; Taghdiri, Nika; Toomu, Avinash; Leszczynska, Aleksandra; Kaufmann, Benedikt; Papouchado, Bettina; Wree, Alexander; Geisler, Lukas; Hoffman, Hal M; Feldstein, Ariel E; King, Kevin R | Hepatology (Baltimore, Md.) | 34997987 | 2022 Jan 08 |
| A flexible split prime editor using truncated reverse transcriptase improves dual-AAV delivery in mouse liver. | Zheng, Chunwei; Liang, Shun-Qing; Liu, Bin; Liu, Pengpeng; Kwan, Suet-Yan; Wolfe, Scot A; Xue, Wen | Molecular therapy : the journal of the American Society of Gene Therapy | 34998953 | 2022 Jan 05 |
| Dimensionless parameter predicts bacterial prodrug success. | Holt, Brandon Alexander; Tuttle, McKenzie; Xu, Yilin; Su, Melanie; Røise, Joachim J; Wang, Xioajian; Murthy, Niren; Kwong, Gabriel A | Molecular systems biology | 35005851 | 2022 01 |
| Prognostication in Acute Neurological Emergencies. | Journal of stroke and cerebrovascular diseases : the official journal of National Stroke Association | 35007934 | 2022 Mar | |
| Proximity labeling identifies a repertoire of site-specific R-loop modulators. | Yan, Qingqing; Wulfridge, Phillip; Doherty, John; Fernandez-Luna, Jose L; Real, Pedro J; Tang, Hsin-Yao; Sarma, Kavitha | Nature communications | 35013239 | 2022 01 10 |
| Designer Extracellular Vesicles Modulate Pro-Neuronal Cell Responses and Improve Intracranial Retention. | Ortega-Pineda, Lilibeth; Sunyecz, Alec; Salazar-Puerta, Ana I; Rincon-Benavides, Maria Angelica; Alzate-Correa, Diego; Anaparthi, Amrita Lakshmi; Guilfoyle, Elizabeth; Mezache, Louisa; Struckman, Heather L; Duarte-Sanmiguel, Silvia; Deng, Binbin; McComb, | Advanced healthcare materials | 35014204 | 2022 03 |
| Polymer-Coated Extracellular Vesicles for Selective Codelivery of Chemotherapeutics and siRNA to Cancer Cells. | Jhan, Yong-Yu; Palou Zuniga, Guillermo; Singh, Kanwar Abhay; Gaharwar, Akhilesh K; Alge, Daniel L; Bishop, Corey J | ACS applied bio materials | 35014481 | 2021 02 15 |
| Myocardial infarction reduces cardiac nociceptive neurotransmission through the vagal ganglia. | Salavatian, Siamak; Hoang, Jonathan D; Yamaguchi, Naoko; Lokhandwala, Zulfiqar A; Swid, Mohammed Amer; Armour, J Andrew; Ardell, Jeffrey L; Vaseghi, Marmar | JCI insight | 35015733 | 2022 Jan 11 |
| Sensing plasma membrane pore formation induces chemokine production in survivors of regulated necrosis. | Developmental cell | 35016014 | 2022 01 24 | |
| One Size Does Not Fit All: Diversifying Immune Function in the Skin. | Naik, Shruti | Journal of immunology (Baltimore, Md. : 1950) | 35017212 | 2022 01 15 |
| MLKL ubiquitylation: more than a makeover. | Cell death and differentiation | 35022572 | 2022 Feb | |
| Air pollution exposure disparities across US population and income groups. | Jbaily, Abdulrahman; Zhou, Xiaodan; Liu, Jie; Lee, Ting-Hwan; Kamareddine, Leila; Verguet, Stéphane; Dominici, Francesca | Nature | 35022594 | 2022 01 |
| The preference for sugar over sweetener depends on a gut sensor cell. | Buchanan, Kelly L; Rupprecht, Laura E; Kaelberer, M Maya; Sahasrabudhe, Atharva; Klein, Marguerita E; Villalobos, Jorge A; Liu, Winston W; Yang, Annabelle; Gelman, Justin; Park, Seongjun; Anikeeva, Polina; Bohórquez, Diego V | Nature neuroscience | 35027761 | 2022 Feb |
| A role for community-level socioeconomic indicators in targeting tuberculosis screening interventions. | Brooks, Meredith B; Jenkins, Helen E; Puma, Daniela; Tzelios, Christine; Millones, Ana Karina; Jimenez, Judith; Galea, Jerome T; Lecca, Leonid; Becerra, Mercedes C; Keshavjee, Salmaan; Yuen, Courtney M | Scientific reports | 35039612 | 2022 01 17 |
| Subcutaneous nanotherapy repurposes the immunosuppressive mechanism of rapamycin to enhance allogeneic islet graft viability. | Burke, Jacqueline A; Zhang, Xiaomin; Bobbala, Sharan; Frey, Molly A; Bohorquez Fuentes, Carolina; Freire Haddad, Helena; Allen, Sean D; Richardson, Reese A K; Ameer, Guillermo A; Scott, Evan A | Nature nanotechnology | 35039683 | 2022 Mar |
| Fighting in a wasteland: deleterious metabolites and antitumor immunity. | Watson, McLane J; Delgoffe, Greg M | The Journal of clinical investigation | 35040434 | 2022 01 18 |
| Phase II Trial of Imatinib Plus Binimetinib in Patients With Treatment-Naive Advanced Gastrointestinal Stromal Tumor. | Chi, Ping; Qin, Li-Xuan; Nguyen, Bastien; Kelly, Ciara M; D'Angelo, Sandra P; Dickson, Mark A; Gounder, Mrinal M; Keohan, Mary L; Movva, Sujana; Nacev, Benjamin A; Rosenbaum, Evan; Thornton, Katherine A; Crago, Aimee M; Yoon, Sam; Ulaner, Gary; Yeh, Randy; Martindale, Moriah; Phelan, Haley T; Biniakewitz, Matthew D; Warda, Sarah; Lee, Cindy J; Berger, Michael F; Schultz, Nikolaus D; Singer, Samuel; Hwang, Sinchun; Chen, Yu; Antonescu, Cristina R; Tap, William D | Journal of clinical oncology : official journal of the American Society of Clinical Oncology | 35041493 | 2022 Jan 18 |
| Comparison and evaluation of statistical error models for scRNA-seq. | Choudhary, Saket; Satija, Rahul | Genome biology | 35042561 | 2022 01 18 |
| Domain-adaptive neural networks improve cross-species prediction of transcription factor binding. | Cochran, Kelly; Srivastava, Divyanshi; Shrikumar, Avanti; Balsubramani, Akshay; Hardison, Ross C; Kundaje, Anshul; Mahony, Shaun | Genome research | 35042722 | 2022 03 |
| A single-cell atlas reveals shared and distinct immune responses and metabolism during SARS-CoV-2 and HIV-1 infections. | Pan, Tony; Cao, Guoshuai; Tang, Erting; Zhao, Yu; Penaloza-MacMaster, Pablo; Fang, Yun; Huang, Jun | bioRxiv : the preprint server for biology | 35043114 | 2022 Jan 11 |
| Sex differences in the reward value of familiar mates in prairie voles. | Vahaba, Daniel M; Halstead, Emily R; Donaldson, Zoe R; Ahern, Todd H; Beery, Annaliese K | Genes, brain, and behavior | 35044087 | 2022 Mar |
| Emergent intra-pair sex differences and organized behavior in pair bonded prairie voles (Microtus ochrogaster). | Brusman, Liza E; Protter, David S W; Fultz, Allison C; Paulson, Maya U; Chapel, Gabriel D; Elges, Isaiah O; Cameron, Ryan T; Beery, Annaliese K; Donaldson, Zoe R | Genes, brain, and behavior | 35044090 | 2022 Jan 19 |
| Human brain mapping with multithousand-channel PtNRGrids resolves spatiotemporal dynamics. | Tchoe, Youngbin; Bourhis, Andrew M; Cleary, Daniel R; Stedelin, Brittany; Lee, Jihwan; Tonsfeldt, Karen J; Brown, Erik C; Siler, Dominic A; Paulk, Angelique C; Yang, Jimmy C; Oh, Hongseok; Ro, Yun Goo; Lee, Keundong; Russman, Samantha M; Ganji, Mehran; Galton, Ian; Ben-Haim, Sharona; Raslan, Ahmed M; Dayeh, Shadi A | Science translational medicine | 35044788 | 2022 01 19 |
| Acute restraint stress redirects prefrontal cortex circuit function through mGlu5 receptor plasticity on somatostatin-expressing interneurons. | Joffe, Max E; Maksymetz, James; Luschinger, Joseph R; Dogra, Shalini; Ferranti, Anthony S; Luessen, Deborah J; Gallinger, Isabel M; Xiang, Zixiu; Branthwaite, Hannah; Melugin, Patrick R; Williford, Kellie M; Centanni, Samuel W; Shields, Brenda C; Lindsley, Craig W; Calipari, Erin S; Siciliano, Cody A; Niswender, Colleen M; Tadross, Michael R; Winder, Danny G; Conn, P Jeffrey | Neuron | 35045338 | 2022 03 16 |
| Pyruvate dehydrogenase inactivation causes glycolytic phenotype in BAP1 mutant uveal melanoma. | Han, Anna; Chua, Vivian; Baqai, Usman; Purwin, Timothy J; Bechtel, Nelisa; Hunter, Emily; Tiago, Manoela; Seifert, Erin; Speicher, David W; Schug, Zachary T; Harbour, J William; Aplin, Andrew E | Oncogene | 35046531 | 2022 02 |
| Hyperspectral Counting of Multiplexed Nanoparticle Emitters in Single Cells and Organelles. | Jena, Prakrit V; Gravely, Mitchell; Cupo, Christian; Safaee, Mohammad Moein; Roxbury, Daniel; Heller, Daniel A | ACS nano | 35049273 | 2022 02 22 |
| Characterization of Macrophage and Cytokine Interactions with Biomaterials Used in Negative-Pressure Wound Therapy. | Veerasubramanian, Praveen Krishna; Joe, Victor C; Liu, Wendy F; Downing, Timothy L | Bioengineering (Basel, Switzerland) | 35049711 | 2021 Dec 22 |
| Evolutionary and mechanistic diversity of Type I-F CRISPR-associated transposons. | Klompe, Sanne E; Jaber, Nora; Beh, Leslie Y; Mohabir, Jason T; Bernheim, Aude; Sternberg, Samuel H | Molecular cell | 35051352 | 2022 Feb 03 |
| SURF4-induced tubular ERGIC selectively expedites ER-to-Golgi transport. | Developmental cell | 35051356 | 2022 02 28 | |
| Genetic manipulation of gut microbes enables single-gene interrogation in a complex microbiome. | Jin, Wen-Bing; Li, Ting-Ting; Huo, Da; Qu, Sophia; Li, Xin V; Arifuzzaman, Mohammad; Lima, Svetlana F; Shi, Hui-Qing; Wang, Aolin; Putzel, Gregory G; Longman, Randy S; Artis, David; Guo, Chun-Jun | Cell | 35051369 | 2022 02 03 |
| The structure of the human cell cycle. | Stallaert, Wayne; Kedziora, Katarzyna M; Taylor, Colin D; Zikry, Tarek M; Ranek, Jolene S; Sobon, Holly K; Taylor, Sovanny R; Young, Catherine L; Cook, Jeanette G; Purvis, Jeremy E | Cell systems | 35051372 | 2022 Jan 19 |
| Cell-free DNA profiling informs all major complications of hematopoietic cell transplantation. | Proceedings of the National Academy of Sciences of the United States of America | 35058359 | 2022 01 25 | |
| SF3B1 homeostasis is critical for survival and therapeutic response in T cell leukemia. | Han, Cuijuan; Khodadadi-Jamayran, Alireza; Lorch, Adam H; Jin, Qi; Serafin, Valentina; Zhu, Ping; Politanska, Yuliya; Sun, Limin; Gutierrez-Diaz, Blanca T; Pryzhkova, Marina V; Abdala-Valencia, Hiam; Bartom, Elizabeth Thomas; Buldini, Barbara; Basso, Giuseppe; Velu, Sadanandan E; Sarma, Kavitha; Mattamana, Basil B; Cho, Byoung-Kyu; Obeng, Rebecca C; Goo, Young Ah; Jordan, Philip W; Tsirigos, Aristotelis; Zhou, Yalu; Ntziachristos, Panagiotis | Science advances | 35061527 | 2022 Jan 21 |
| mDrop-Seq: Massively Parallel Single-Cell RNA-Seq of Saccharomyces cerevisiae and Candida albicans. | Dohn, Ryan; Xie, Bingqing; Back, Rebecca; Selewa, Alan; Eckart, Heather; Rao, Reeta Prusty; Basu, Anindita | Vaccines | 35062691 | 2021 Dec 27 |
| NudC guides client transfer between the Hsp40/70 and Hsp90 chaperone systems. | Biebl, Maximilian M; Delhommel, Florent; Faust, Ofrah; Zak, Krzysztof M; Agam, Ganesh; Guo, Xiaoyan; Mühlhofer, Moritz; Dahiya, Vinay; Hillebrand, Daniela; Popowicz, Grzegorz M; Kampmann, Martin; Lamb, Don C; Rosenzweig, Rina; Sattler, Michael; Buchner, Johannes | Molecular cell | 35063133 | 2022 02 03 |
| Genome-wide detection of CRISPR editing in vivo using GUIDE-tag. | Liang, Shun-Qing; Liu, Pengpeng; Smith, Jordan L; Mintzer, Esther; Maitland, Stacy; Dong, Xiaolong; Yang, Qiyuan; Lee, Jonathan; Haynes, Cole M; Zhu, Lihua Julie; Watts, Jonathan K; Sontheimer, Erik J; Wolfe, Scot A; Xue, Wen | Nature communications | 35064134 | 2022 01 21 |
| Revisiting the malaria hypothesis: accounting for polygenicity and pleiotropy. | Ebel, Emily R; Uricchio, Lawrence H; Petrov, Dmitri A; Egan, Elizabeth S | Trends in parasitology | 35065882 | 2022 Apr |
| Aggressive but not reproductive boldness in male green anole lizards correlates with baseline vasopressin activity. | Kabelik, David; Julien, Allison R; Waddell, Brandon R; Batschelett, Mitchell A; O'Connell, Lauren A | Hormones and behavior | 35066329 | 2022 04 |
| Peritoneal Effluent Cell-Free DNA Sequencing in Peritoneal Dialysis Patients With and Without Peritonitis. | Burnham, Philip; Chen, Fanny; Cheng, Alexandre P; Srivatana, Vesh; Zhang, Lisa T; Edusei, Emmanuel; Albakry, Shady; Botticelli, Brittany; Guo, Xunxi; Renaghan, Amanda; Silberzweig, Jeffrey; Dadhania, Darshana M; Lenz, Joan S; Heyang, Michael; Iliev, Iliyan D; Hayden, Joshua A; Westblade, Lars F; De Vlaminck, Iwijn; Lee, John R | Kidney medicine | 35072047 | 2022 Jan |
| Modeling multiscale causal interactions between spiking and field potential signals during behavior. | Wang, Chuanmeizhi; Pesaran, Bijan; Shanechi, Maryam M | Journal of neural engineering | 35073530 | 2022 03 07 |
| Rational design of anti-inflammatory lipid nanoparticles for mRNA delivery. | Zhang, Hanwen; Han, Xuexiang; Alameh, Mohamad-Gabriel; Shepherd, Sarah J; Padilla, Marshall S; Xue, Lulu; Butowska, Kamila; Weissman, Drew; Mitchell, Michael J | Journal of biomedical materials research. Part A | 35076171 | 2022 May |
| The Potential Beneficial Effects of Vaccination on Antigenically Evolving Pathogens. | Wen, Frank T; Malani, Anup; Cobey, Sarah | The American naturalist | 35077280 | 2022 02 |
| Macrophage calcium reporter mice reveal immune cell communication in vitro and in vivo. | Taghdiri, Nika; Calcagno, David M; Fu, Zhenxing; Huang, Kenneth; Kohler, Rainer H; Weissleder, Ralph; Coleman, Todd P; King, Kevin R | Cell reports methods | 35079727 | 2021 Dec 20 |
| The consequences of differential origin licensing dynamics in distinct chromatin environments. | Mei, Liu; Kedziora, Katarzyna M; Song, Eun-Ah; Purvis, Jeremy E; Cook, Jeanette Gowen | Nucleic acids research | 35079814 | 2022 Jan 26 |
| The Aging Aorta: Are We Only as Old as Our Endothelium? | Gupta, Rajat M; Plutzky, Jorge | Arteriosclerosis, thrombosis, and vascular biology | 35080899 | 2022 02 |
| Synthesis of Oriented Hexasomes and Asymmetric Nucleosomes Using a Template Editing Process. | Dao, Hai T; Liu, Hengyuan; Mashtalir, Nazar; Kadoch, Cigall; Muir, Tom W | Journal of the American Chemical Society | 35081309 | 2022 02 09 |
| Rethinking nomenclature for interspecies cell fusions. | Pavlovic, Bryan J; Fox, Dov; Schaefer, Nathan K; Pollen, Alex A | Nature reviews. Genetics | 35082442 | 2022 05 |
| Vaccination with BNT162b2 reduces transmission of SARS-CoV-2 to household contacts in Israel. | Prunas, Ottavia; Warren, Joshua L; Crawford, Forrest W; Gazit, Sivan; Patalon, Tal; Weinberger, Daniel M; Pitzer, Virginia E | Science (New York, N.Y.) | 35084937 | 2022 03 11 |
| Amplification of human interneuron progenitors promotes brain tumors and neurological defects. | Eichmüller, Oliver L; Corsini, Nina S; Vértesy, Ábel; Morassut, Ilaria; Scholl, Theresa; Gruber, Victoria-Elisabeth; Peer, Angela M; Chu, Julia; Novatchkova, Maria; Hainfellner, Johannes A; Paredes, Mercedes F; Feucht, Martha; Knoblich, Jürgen A | Science (New York, N.Y.) | 35084981 | 2022 01 28 |
| Altered canonical and striatal-frontal resting state functional connectivity in children with pathogenic variants in the Ras/mitogen-activated protein kinase pathway. | Bruno, Jennifer L; Shrestha, Sharon B; Reiss, Allan L; Saggar, Manish; Green, Tamar | Molecular psychiatry | 35087195 | 2022 Jan 28 |
| Dual-layered hydrogels allow complete genome recovery with nucleic acid cytometry. | Hatori, Makiko N; Modavi, Cyrus; Xu, Peng; Weisgerber, Daniel; Abate, Adam R | Biotechnology journal | 35088927 | 2022 Jan 28 |
| Assessment of Case Fatality Rates and Overall Prevalence of Firearm Violence in California, 2005-2019. | Brantingham, P Jeffrey; Tita, George E; Jung, Shelley; Ahern, Jennifer | JAMA network open | 35089356 | 2022 01 04 |
| A high-throughput method to deliver targeted optogenetic stimulation to moving C. elegans populations. | Liu, Mochi; Kumar, Sandeep; Sharma, Anuj K; Leifer, Andrew M | PLoS biology | 35089912 | 2022 Jan |
| Structural basis for dysregulation of aminolevulinic acid synthase in human disease. | Taylor, Jessica L; Brown, Breann L | The Journal of biological chemistry | 35093382 | 2022 Jan 27 |
| Mass Synaptometry: Applying Mass Cytometry to Single Synapse Analysis. | Gajera, Chandresh R; Fernandez, Rosemary; Postupna, Nadia; Montine, Kathleen S; Keene, C Dirk; Bendall, Sean C; Montine, Thomas J | Methods in molecular biology (Clifton, N.J.) | 35099792 | 2022 |
| Emotional Distress, Targeted Rejection, and Antibody Production After Influenza Vaccination in Adolescence. | Corallo, Kelsey L; Lyle, Sarah M; Carlock, Michael A; Ross, Ted M; Ehrlich, Katherine B | Psychosomatic medicine | 35100185 | 2022 05 01 |
| Atomic force microscopy reveals distinct protofilament-scale structural dynamics in depolymerizing microtubule arrays. | Wijeratne, Sithara S; Marchan, Michelle F; Tresback, Jason S; Subramanian, Radhika | Proceedings of the National Academy of Sciences of the United States of America | 35101922 | 2022 02 01 |
| A Protocol for Studying Transcription Factor Dynamics Using Fast Single-Particle Tracking and Spot-On Model-Based Analysis. | Jha, Asmita; Hansen, Anders S | Methods in molecular biology (Clifton, N.J.) | 35103967 | 2022 |
| 2D Covalent Organic Framework Direct Osteogenic Differentiation of Stem Cells. | Bhunia, Sukanya; Jaiswal, Manish K; Singh, Kanwar Abhay; Deo, Kaivalya A; Gaharwar, Akhilesh K | Advanced healthcare materials | 35104392 | 2022 05 |
| Are some narratives better than others?: The impact of different narrative forms on adolescents' intentions to text and drive. | Scherr, Courtney L; Lillie, Helen; Ratcliff, Chelsea L; Krakow, Melinda; Liu, Miao; Jensen, Jakob D | Risk analysis : an official publication of the Society for Risk Analysis | 35104924 | 2022 Feb 01 |
| Phase Ib Trial of the Combination of Imatinib and Binimetinib in Patients with Advanced Gastrointestinal Stromal Tumors (GIST). | Chi, Ping; Qin, Li-Xuan; Camacho, Niedzica; Kelly, Ciara M; D'Angelo, Sandra P; Dickson, Mark A; Gounder, Mrinal M; Keohan, Mary Lou; Movva, Sujana; Nacev, Benjamin A; Rosenbaum, Evan; Thornton, Katherine A; Crago, Aimee M; Francis, Jasmine H; Martindale, Moriah; Phelan, Haley T; Biniakewitz, Matthew D; Lee, Cindy J; Singer, Samuel; Hwang, Sinchun; Berger, Michael F; Chen, Yu; Antonescu, Cristina R; Tap, William D | Clinical cancer research : an official journal of the American Association for Cancer Research | 35110417 | 2022 Feb 02 |
| A pan-CRISPR analysis of mammalian cell specificity identifies ultra-compact sgRNA subsets for genome-scale experiments. | Zhao, Boyang; Rao, Yiyun; Leighow, Scott; O'Brien, Edward P; Gilbert, Luke; Pritchard, Justin R | Nature communications | 35110534 | 2022 02 02 |
| The adenine methylation debate. | Boulias, Konstantinos; Greer, Eric Lieberman | Science (New York, N.Y.) | 35113697 | 2022 02 04 |
| Yoghurt consumption is associated with changes in the composition of the human gut microbiome and metabolome. | Le Roy, Caroline Ivanne; Kurilshikov, Alexander; Leeming, Emily R; Visconti, Alessia; Bowyer, Ruth C E; Menni, Cristina; Fachi, Mario; Koutnikova, Hana; Veiga, Patrick; Zhernakova, Alexandra; Derrien, Mureil; Spector, Tim D | BMC microbiology | 35114943 | 2022 02 03 |
| Noninvasive Prediction of Congenital Cytomegalovirus Infection After Maternal Primary Infection. | Rouse, Dwight J; Fette, Lida M; Hughes, Brenna L; Saade, George R; Dinsmoor, Mara J; Reddy, Uma M; Pass, Robert; Allard, Donna; Mallett, Gail; Clifton, Rebecca G; Saccoccio, Frances M; Permar, Sallie R; Gyamfi-Bannerman, Cynthia; Varner, Michael W; Goodnight, William H; Tita, Alan T N; Costantine, Maged M; Swamy, Geeta K; Heyborne, Kent D; Chien, Edward K; Chauhan, Suneet P; El-Sayed, Yasser Y; Casey, Brian M; Parry, Samuel; Simhan, Hyagriv N; Napolitano, Peter G; Macones, George A; Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) Maternal-Fetal Medicine Units (MFMU) Network | Obstetrics and gynecology | 35115450 | 2022 03 01 |
| Strain-level fitness in the gut microbiome is an emergent property of glycans and a single metabolite. | Park, Sun-Yang; Rao, Chitong; Coyte, Katharine Z; Kuziel, Gavin A; Zhang, Yancong; Huang, Wentao; Franzosa, Eric A; Weng, Jing-Ke; Huttenhower, Curtis; Rakoff-Nahoum, Seth | Cell | 35120663 | 2022 02 03 |
| Fluctuations in behavior and affect in college students measured using deep phenotyping. | Vidal Bustamante, Constanza M; Coombs 3rd, Garth; Rahimi-Eichi, Habiballah; Mair, Patrick; Onnela, Jukka-Pekka; Baker, Justin T; Buckner, Randy L | Scientific reports | 35121741 | 2022 02 04 |
| Built to last: lysosome remodeling and repair in health and disease. | Zoncu, Roberto; Perera, Rushika M | Trends in cell biology | 35123838 | 2022 Jul |
| Decontaminate Traces From Fluorescence Calcium Imaging Videos Using Targeted Non-negative Matrix Factorization. | Bao, Yijun; Redington, Emily; Agarwal, Agnim; Gong, Yiyang | Frontiers in neuroscience | 35126042 | 2021 |
| TISSUE CLEARING. | Richardson, Douglas S; Guan, Webster; Matsumoto, Katsuhiko; Pan, Chenchen; Chung, Kwanghun; Ertürk, Ali; Ueda, Hiroki R; Lichtman, Jeff W | Nature reviews. Methods primers | 35128463 | 2021 |
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| MRBLE-pep Measurements Reveal Accurate Binding Affinities for B56, a PP2A Regulatory Subunit. | Hein, Jamin B; Cyert, Martha S; Fordyce, Polly M | ACS measurement science Au | 35128539 | 2021 Oct 20 |
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| Treatment of Wound Infections in a Mouse Model Using Zn2+-Releasing Phage Bound to Gold Nanorods. | Peng, Huan; Rossetto, Daniele; Mansy, Sheref S; Jordan, Maria C; Roos, Kenneth P; Chen, Irene A | ACS nano | 35239330 | 2022 Mar 22 |
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| Field validation of the performance of paper-based tests for the detection of the Zika and chikungunya viruses in serum samples. | Karlikow, Margot; da Silva, Severino Jefferson Ribeiro; Guo, Yuxiu; Cicek, Seray; Krokovsky, Larissa; Homme, Paige; Xiong, Yilin; Xu, Talia; Calderón-Peláez, Maria-Angelica; Camacho-Ortega, Sigrid; Ma, Duo; de Magalhães, Jurandy Júnior Ferraz; Souza, Bárbara Nayane Rosário Fernandes; de Albuquerque Cabral, Diego Guerra; Jaenes, Katariina; Sutyrina, Polina; Ferrante, Tom; Benitez, Andrea Denisse; Nipaz, Victoria; Ponce, Patricio; Rackus, Darius G; Collins, James J; Paiva, Marcelo; Castellanos, Jaime E; Cevallos, Varsovia; Green, Alexander A; Ayres, Constância; Pena, Lindomar; Pardee, Keith | Nature biomedical engineering | 35256758 | 2022 Mar |
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| A genome-scale screen for synthetic drivers of T cell proliferation. | Legut, Mateusz; Gajic, Zoran; Guarino, Maria; Daniloski, Zharko; Rahman, Jahan A; Xue, Xinhe; Lu, Congyi; Lu, Lu; Mimitou, Eleni P; Hao, Stephanie; Davoli, Teresa; Diefenbach, Catherine; Smibert, Peter; Sanjana, Neville E | Nature | 35296855 | 2022 03 |
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| Spatial transcriptomic reconstruction of the mouse olfactory glomerular map suggests principles of odor processing. | Wang, I-Hao; Murray, Evan; Andrews, Greg; Jiang, Hao-Ching; Park, Sung Jin; Donnard, Elisa; Durán-Laforet, Violeta; Bear, Daniel M; Faust, Travis E; Garber, Manuel; Baer, Christina E; Schafer, Dorothy P; Weng, Zhiping; Chen, Fei; Macosko, Evan Z; Greer, Paul L | Nature neuroscience | 35314823 | 2022 04 |
| CFTR-mediated monocyte/macrophage dysfunction revealed by cystic fibrosis proband-parent comparisons. | Zhang, Xi; Moore, Camille M; Harmacek, Laura D; Domenico, Joanne; Rangaraj, Vittobai Rashika; Ideozu, Justin E; Knapp, Jennifer R; Woods, Katherine J; Jump, Stephanie; Jia, Shuang; Prokop, Jeremy W; Bowler, Russell; Hessner, Martin J; Gelfand, Erwin W; Levy, Hara | JCI insight | 35315363 | 2022 Mar 22 |
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| The development and evolution of inhibitory neurons in primate cerebrum. | Schmitz, Matthew T; Sandoval, Kadellyn; Chen, Christopher P; Mostajo-Radji, Mohammed A; Seeley, William W; Nowakowski, Tomasz J; Ye, Chun Jimmie; Paredes, Mercedes F; Pollen, Alex A | Nature | 35322231 | 2022 03 |
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| Pathologically Entangled: Brain Trauma-Evoked ROS Imbalance Disrupts Kir Channel Function in Distant Peripheral Vessels. | Weir, Nick; Longden, Thomas A | Function (Oxford, England) | 35330675 | 2021 |
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| Characterizing cellular heterogeneity in chromatin state with scCUT&Tag-pro. | Zhang, Bingjie; Srivastava, Avi; Mimitou, Eleni; Stuart, Tim; Raimondi, Ivan; Hao, Yuhan; Smibert, Peter; Satija, Rahul | Nature biotechnology | 35332340 | 2022 Aug |
| Probiotic Escherichia coli Nissle 1917 inhibits bacterial persisters that survive fluoroquinolone treatment. | Hare, Patricia J; Englander, Hanna E; Mok, Wendy W K | Journal of applied microbiology | 35332984 | 2022 Jun |
| Scinderin promotes fusion of electron transport chain dysfunctional muscle stem cells with myofibers. | Wang, Xun; Shelton, Spencer D; Bordieanu, Bogdan; Frank, Anderson R; Yi, Yating; Venigalla, Siva Sai Krishna; Gu, Zhimin; Lenser, Nicholas P; Glogauer, Michael; Chandel, Navdeep S; Zhao, Hu; Zhao, Zhiyu; McFadden, David G; Mishra, Prashant | Nature aging | 35342888 | 2022 |
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| A Micropatterning Assay for Measuring Cell Chirality. | Zhang, Haokang; Ronaldson-Bouchard, Kacey; Vunjak-Novakovic, Gordana; Wan, Leo Q | Journal of visualized experiments : JoVE | 35343954 | 2022 03 11 |
| Neural mechanisms of persistent aggression. | Guthman, Eartha Mae; Falkner, Annegret L | Current opinion in neurobiology | 35344844 | 2022 04 |
| The replacement of helper lipids with charged alternatives in lipid nanoparticles facilitates targeted mRNA delivery to the spleen and lungs. | LoPresti, Samuel T; Arral, Mariah L; Chaudhary, Namit; Whitehead, Kathryn A | Journal of controlled release : official journal of the Controlled Release Society | 35346768 | 2022 05 |
| HYBRiD: hydrogel-reinforced DISCO for clearing mammalian bodies. | Nudell, Victoria; Wang, Yu; Pang, Zhengyuan; Lal, Neeraj K; Huang, Min; Shaabani, Namir; Kanim, Wesam; Teijaro, John; Maximov, Anton; Ye, Li | Nature methods | 35347322 | 2022 04 |
| Label-Free Spectroscopic SARS-CoV-2 Detection on Versatile Nanoimprinted Substrates. | Paria, Debadrita; Kwok, Kam Sang; Raj, Piyush; Zheng, Peng; Gracias, David H; Barman, Ishan | Nano letters | 35348344 | 2022 Mar 29 |
| An open-source transparent microelectrode array. | Weaver, Isaac A; Li, Austin W; Shields, Brenda C; Tadross, Michael R | Journal of neural engineering | 35349992 | 2022 04 13 |
| Reproducible, high-dimensional imaging in archival human tissue by multiplexed ion beam imaging by time-of-flight (MIBI-TOF). | Liu, Candace C; Bosse, Marc; Kong, Alex; Kagel, Adam; Kinders, Robert; Hewitt, Stephen M; Varma, Sushama; van de Rijn, Matt; Nowak, Stanisław H; Bendall, Sean C; Angelo, Michael | Laboratory investigation; a journal of technical methods and pathology | 35351966 | 2022 07 |
| Neuroprognostication: a conceptual framework. | Fischer, David; Edlow, Brian L; Giacino, Joseph T; Greer, David M | Nature reviews. Neurology | 35352033 | 2022 07 |
| Anatomic position determines oncogenic specificity in melanoma. | Weiss, Joshua M; Hunter, Miranda V; Cruz, Nelly M; Baggiolini, Arianna; Tagore, Mohita; Ma, Yilun; Misale, Sandra; Marasco, Michelangelo; Simon-Vermot, Theresa; Campbell, Nathaniel R; Newell, Felicity; Wilmott, James S; Johansson, Peter A; Thompson, John F; Long, Georgina V; Pearson, John V; Mann, Graham J; Scolyer, Richard A; Waddell, Nicola; Montal, Emily D; Huang, Ting-Hsiang; Jonsson, Philip; Donoghue, Mark T A; Harris, Christopher C; Taylor, Barry S; Xu, Tianhao; Chaligné, Ronan; Shliaha, Pavel V; Hendrickson, Ronald; Jungbluth, Achim A; Lezcano, Cecilia; Koche, Richard; Studer, Lorenz; Ariyan, Charlotte E; Solit, David B; Wolchok, Jedd D; Merghoub, Taha; Rosen, Neal; Hayward, Nicholas K; White, Richard M | Nature | 35355015 | 2022 04 |
| Complete genomic and epigenetic maps of human centromeres. | Altemose, Nicolas; Logsdon, Glennis A; Bzikadze, Andrey V; Sidhwani, Pragya; Langley, Sasha A; Caldas, Gina V; Hoyt, Savannah J; Uralsky, Lev; Ryabov, Fedor D; Shew, Colin J; Sauria, Michael E G; Borchers, Matthew; Gershman, Ariel; Mikheenko, Alla; Shepelev, Valery A; Dvorkina, Tatiana; Kunyavskaya, Olga; Vollger, Mitchell R; Rhie, Arang; McCartney, Ann M; Asri, Mobin; Lorig-Roach, Ryan; Shafin, Kishwar; Lucas, Julian K; Aganezov, Sergey; Olson, Daniel; de Lima, Leonardo Gomes; Potapova, Tamara; Hartley, Gabrielle A; Haukness, Marina; Kerpedjiev, Peter; Gusev, Fedor; Tigyi, Kristof; Brooks, Shelise; Young, Alice; Nurk, Sergey; Koren, Sergey; Salama, Sofie R; Paten, Benedict; Rogaev, Evgeny I; Streets, Aaron; Karpen, Gary H; Dernburg, Abby F; Sullivan, Beth A; Straight, Aaron F; Wheeler, Travis J; Gerton, Jennifer L; Eichler, Evan E; Phillippy, Adam M; Timp, Winston; Dennis, Megan Y; O'Neill, Rachel J; Zook, Justin M; Schatz, Michael C; Pevzner, Pavel A; Diekhans, Mark; Langley, Charles H; Alexandrov, Ivan A; Miga, Karen H | Science (New York, N.Y.) | 35357911 | 2022 04 |
| The complete sequence of a human genome. | Nurk, Sergey; Koren, Sergey; Rhie, Arang; Rautiainen, Mikko; Bzikadze, Andrey V; Mikheenko, Alla; Vollger, Mitchell R; Altemose, Nicolas; Uralsky, Lev; Gershman, Ariel; Aganezov, Sergey; Hoyt, Savannah J; Diekhans, Mark; Logsdon, Glennis A; Alonge, Michael; Antonarakis, Stylianos E; Borchers, Matthew; Bouffard, Gerard G; Brooks, Shelise Y; Caldas, Gina V; Chen, Nae-Chyun; Cheng, Haoyu; Chin, Chen-Shan; Chow, William; de Lima, Leonardo G; Dishuck, Philip C; Durbin, Richard; Dvorkina, Tatiana; Fiddes, Ian T; Formenti, Giulio; Fulton, Robert S; Fungtammasan, Arkarachai; Garrison, Erik; Grady, Patrick G S; Graves-Lindsay, Tina A; Hall, Ira M; Hansen, Nancy F; Hartley, Gabrielle A; Haukness, Marina; Howe, Kerstin; Hunkapiller, Michael W; Jain, Chirag; Jain, Miten; Jarvis, Erich D; Kerpedjiev, Peter; Kirsche, Melanie; Kolmogorov, Mikhail; Korlach, Jonas; Kremitzki, Milinn; Li, Heng; Maduro, Valerie V; Marschall, Tobias; McCartney, Ann M; McDaniel, Jennifer; Miller, Danny E; Mullikin, James C; Myers, Eugene W; Olson, Nathan D; Paten, Benedict; Peluso, Paul; Pevzner, Pavel A; Porubsky, David; Potapova, Tamara; Rogaev, Evgeny I; Rosenfeld, Jeffrey A; Salzberg, Steven L; Schneider, Valerie A; Sedlazeck, Fritz J; Shafin, Kishwar; Shew, Colin J; Shumate, Alaina; Sims, Ying; Smit, Arian F A; Soto, Daniela C; Sović, Ivan; Storer, Jessica M; Streets, Aaron; Sullivan, Beth A; Thibaud-Nissen, Françoise; Torrance, James; Wagner, Justin; Walenz, Brian P; Wenger, Aaron; Wood, Jonathan M D; Xiao, Chunlin; Yan, Stephanie M; Young, Alice C; Zarate, Samantha; Surti, Urvashi; McCoy, Rajiv C; Dennis, Megan Y; Alexandrov, Ivan A; Gerton, Jennifer L; O'Neill, Rachel J; Timp, Winston; Zook, Justin M; Schatz, Michael C; Eichler, Evan E; Miga, Karen H; Phillippy, Adam M | Science (New York, N.Y.) | 35357919 | 2022 04 |
| A complete reference genome improves analysis of human genetic variation. | Aganezov, Sergey; Yan, Stephanie M; Soto, Daniela C; Kirsche, Melanie; Zarate, Samantha; Avdeyev, Pavel; Taylor, Dylan J; Shafin, Kishwar; Shumate, Alaina; Xiao, Chunlin; Wagner, Justin; McDaniel, Jennifer; Olson, Nathan D; Sauria, Michael E G; Vollger, Mitchell R; Rhie, Arang; Meredith, Melissa; Martin, Skylar; Lee, Joyce; Koren, Sergey; Rosenfeld, Jeffrey A; Paten, Benedict; Layer, Ryan; Chin, Chen-Shan; Sedlazeck, Fritz J; Hansen, Nancy F; Miller, Danny E; Phillippy, Adam M; Miga, Karen H; McCoy, Rajiv C; Dennis, Megan Y; Zook, Justin M; Schatz, Michael C | Science (New York, N.Y.) | 35357935 | 2022 04 |
| Skin immunity: dissecting the complex biology of our body's outer barrier. | Zhang, Chenlu; Merana, Geil R; Harris-Tryon, Tamia; Scharschmidt, Tiffany C | Mucosal immunology | 35361906 | 2022 04 |
| Altered propionate metabolism contributes to tumour progression and aggressiveness. | Gomes, Ana P; Ilter, Didem; Low, Vivien; Drapela, Stanislav; Schild, Tanya; Mullarky, Edouard; Han, Julie; Elia, Ilaria; Broekaert, Dorien; Rosenzweig, Adam; Nagiec, Michal; Nunes, Joana B; Schaffer, Bethany E; Mutvei, Anders P; Asara, John M; Cantley, Lewis C; Fendt, Sarah-Maria; Blenis, John | Nature metabolism | 35361954 | 2022 Apr |
| Inferring gene expression from cell-free DNA fragmentation profiles. | Esfahani, Mohammad Shahrokh; Hamilton, Emily G; Mehrmohamadi, Mahya; Nabet, Barzin Y; Alig, Stefan K; King, Daniel A; Steen, Chloé B; Macaulay, Charles W; Schultz, Andre; Nesselbush, Monica C; Soo, Joanne; Schroers-Martin, Joseph G; Chen, Binbin; Binkley, Michael S; Stehr, Henning; Chabon, Jacob J; Sworder, Brian J; Hui, Angela B-Y; Frank, Matthew J; Moding, Everett J; Liu, Chih Long; Newman, Aaron M; Isbell, James M; Rudin, Charles M; Li, Bob T; Kurtz, David M; Diehn, Maximilian; Alizadeh, Ash A | Nature biotechnology | 35361996 | 2022 04 |
| Deciphering albumin-directed drug delivery by imaging. | Hu, Huiyu; Quintana, Jeremy; Weissleder, Ralph; Parangi, Sareh; Miller, Miles | Advanced drug delivery reviews | 35364124 | 2022 06 |
| Estimating muscle activation from EMG using deep learning-based dynamical systems models. | Wimalasena, Lahiru N; Braun, Jonas F; Keshtkaran, Mohammad Reza; Hofmann, David; Gallego, Juan Álvaro; Alessandro, Cristiano; Tresch, Matthew C; Miller, Lee E; Pandarinath, Chethan | Journal of neural engineering | 35366649 | 2022 05 19 |
| A Dual-Modal Single-Antibody Plasmonic Spectro-Immunoassay for Detection of Small Molecules. | Zheng, Peng; Wu, Lintong; Raj, Piyush; Mizutani, Takayuki; Szabo, Miklos; Hanson, William A; Barman, Ishan | Small (Weinheim an der Bergstrasse, Germany) | 35373504 | 2022 May |
| Peptide-Induced Fractal Assembly of Silver Nanoparticles for Visual Detection of Disease Biomarkers. | Retout, Maurice; Mantri, Yash; Jin, Zhicheng; Zhou, Jiajing; Noël, Grégoire; Donovan, Brian; Yim, Wonjun; Jokerst, Jesse V | ACS nano | 35377141 | 2022 Apr 04 |
| Studying Murine Small Bowel Mechanosensing of Luminal Particulates. | Mercado-Perez, Arnaldo; Wegner, Andrew; Knutson, Kaitlyn; Zumchak, Michael; Beyder, Arthur | Journal of visualized experiments : JoVE | 35377361 | 2022 03 18 |
| Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia. | Su-Feher, Linda; Rubin, Anna N; Silberberg, Shanni N; Catta-Preta, Rinaldo; Lim, Kenneth J; Ypsilanti, Athena R; Zdilar, Iva; McGinnis, Christopher S; McKinsey, Gabriel L; Rubino Jr, Thomas E; Hawrylycz, Michael J; Thompson, Carol; Gartner, Zev J; Puelles, Luis; Zeng, Hongkui; Rubenstein, John L R; Nord, Alex S | Proceedings of the National Academy of Sciences of the United States of America | 35377797 | 2022 04 12 |
| Synchronization of RF data in ultrasound open platforms (UOPs) for high-accuracy and high-resolution photoacoustic tomography using the "Scissors" programming method. | Fu, Lei; Jin, Zhicheng; Qi, Baiyan; Yim, Wonjun; Wu, Zhuohong; He, Tengyu; Joksert, Jesse V | IEEE transactions on ultrasonics, ferroelectrics, and frequency control | 35377843 | 2022 Apr 04 |
| Engineered biosynthesis of alkyne-tagged polyketides. | Gu, Di; Zhang, Wenjun | Methods in enzymology | 35379442 | 2022 |
| Brain-wide mapping reveals that engrams for a single memory are distributed across multiple brain regions. | Roy, Dheeraj S; Park, Young-Gyun; Kim, Minyoung E; Zhang, Ying; Ogawa, Sachie K; DiNapoli, Nicholas; Gu, Xinyi; Cho, Jae H; Choi, Heejin; Kamentsky, Lee; Martin, Jared; Mosto, Olivia; Aida, Tomomi; Chung, Kwanghun; Tonegawa, Susumu | Nature communications | 35379803 | 2022 04 04 |
| SLEAP: A deep learning system for multi-animal pose tracking. | Pereira, Talmo D; Tabris, Nathaniel; Matsliah, Arie; Turner, David M; Li, Junyu; Ravindranath, Shruthi; Papadoyannis, Eleni S; Normand, Edna; Deutsch, David S; Wang, Z Yan; McKenzie-Smith, Grace C; Mitelut, Catalin C; Castro, Marielisa Diez; D'Uva, John; Kislin, Mikhail; Sanes, Dan H; Kocher, Sarah D; Wang, Samuel S-H; Falkner, Annegret L; Shaevitz, Joshua W; Murthy, Mala | Nature methods | 35379947 | 2022 04 |
| A split prime editor with untethered reverse transcriptase and circular RNA template. | Liu, Bin; Dong, Xiaolong; Cheng, Haoyang; Zheng, Chunwei; Chen, Zexiang; Rodríguez, Tomás C; Liang, Shun-Qing; Xue, Wen; Sontheimer, Erik J | Nature biotechnology | 35379962 | 2022 09 |
| Impaired neurogenesis alters brain biomechanics in a neuroprogenitor-based genetic subtype of congenital hydrocephalus. | Duy, Phan Q; Weise, Stefan C; Marini, Claudia; Li, Xiao-Jun; Liang, Dan; Dahl, Peter J; Ma, Shaojie; Spajic, Ana; Dong, Weilai; Juusola, Jane; Kiziltug, Emre; Kundishora, Adam J; Koundal, Sunil; Pedram, Maysam Z; Torres-Fernández, Lucia A; Händler, Kristian; De Domenico, Elena; Becker, Matthias; Ulas, Thomas; Juranek, Stefan A; Cuevas, Elisa; Hao, Le Thi; Jux, Bettina; Sousa, André M M; Liu, Fuchen; Kim, Suel-Kee; Li, Mingfeng; Yang, Yiying; Takeo, Yutaka; Duque, Alvaro; Nelson-Williams, Carol; Ha, Yonghyun; Selvaganesan, Kartiga; Robert, Stephanie M; Singh, Amrita K; Allington, Garrett; Furey, Charuta G; Timberlake, Andrew T; Reeves, Benjamin C; Smith, Hannah; Dunbar, Ashley; DeSpenza Jr, Tyrone; Goto, June; Marlier, Arnaud; Moreno-De-Luca, Andres; Yu, Xin; Butler, William E; Carter, Bob S; Lake, Evelyn M R; Constable, R Todd; Rakic, Pasko; Lin, Haifan; Deniz, Engin; Benveniste, Helene; Malvankar, Nikhil S; Estrada-Veras, Juvianee I; Walsh, Christopher A; Alper, Seth L; Schultze, Joachim L; Paeschke, Katrin; Doetzlhofer, Angelika; Wulczyn, F Gregory; Jin, Sheng Chih; Lifton, Richard P; Sestan, Nenad; Kolanus, Waldemar; Kahle, Kristopher T | Nature neuroscience | 35379995 | 2022 Apr 04 |
| Listeria monocytogenes requires cellular respiration for NAD+ regeneration and pathogenesis. | Rivera-Lugo, Rafael; Deng, David; Anaya-Sanchez, Andrea; Tejedor-Sanz, Sara; Tang, Eugene; Reyes Ruiz, Valeria M; Smith, Hans B; Titov, Denis V; Sauer, John-Demian; Skaar, Eric P; Ajo-Franklin, Caroline M; Portnoy, Daniel A; Light, Samuel H | eLife | 35380108 | 2022 04 05 |
| Impact of collagen-like peptide (CLP) heterotrimeric triple helix design on helical thermal stability and hierarchical assembly: a coarse-grained molecular dynamics simulation study. | Taylor, Phillip A; Kloxin, April M; Jayaraman, Arthi | Soft matter | 35380571 | 2022 Apr 20 |
| Firearm Violence Following the Implementation of California's Gun Violence Restraining Order Law. | Pear, Veronica A; Wintemute, Garen J; Jewell, Nicholas P; Ahern, Jennifer | JAMA network open | 35380646 | 2022 04 01 |
| Cell type determination for cardiac differentiation occurs soon after seeding of human-induced pluripotent stem cells. | Jiang, Connie L; Goyal, Yogesh; Jain, Naveen; Wang, Qiaohong; Truitt, Rachel E; Coté, Allison J; Emert, Benjamin; Mellis, Ian A; Kiani, Karun; Yang, Wenli; Jain, Rajan; Raj, Arjun | Genome biology | 35382863 | 2022 Apr 05 |
| Mendelian randomization supports bidirectional causality between telomere length and clonal hematopoiesis of indeterminate potential. | Nakao, Tetsushi; Bick, Alexander G; Taub, Margaret A; Zekavat, Seyedeh M; Uddin, Md M; Niroula, Abhishek; Carty, Cara L; Lane, John; Honigberg, Michael C; Weinstock, Joshua S; Pampana, Akhil; Gibson, Christopher J; Griffin, Gabriel K; Clarke, Shoa L; Bhattacharya, Romit; Assimes, Themistocles L; Emery, Leslie S; Stilp, Adrienne M; Wong, Quenna; Broome, Jai; Laurie, Cecelia A; Khan, Alyna T; Smith, Albert V; Blackwell, Thomas W; Codd, Veryan; Nelson, Christopher P; Yoneda, Zachary T; Peralta, Juan M; Bowden, Donald W; Irvin, Marguerite R; Boorgula, Meher; Zhao, Wei; Yanek, Lisa R; Wiggins, Kerri L; Hixson, James E; Gu, C Charles; Peloso, Gina M; Roden, Dan M; Reupena, Muagututi'a S; Hwu, Chii-Min; DeMeo, Dawn L; North, Kari E; Kelly, Shannon; Musani, Solomon K; Bis, Joshua C; Lloyd-Jones, Donald M; Johnsen, Jill M; Preuss, Michael; Tracy, Russell P; Peyser, Patricia A; Qiao, Dandi; Desai, Pinkal; Curran, Joanne E; Freedman, Barry I; Tiwari, Hemant K; Chavan, Sameer; Smith, Jennifer A; Smith, Nicholas L; Kelly, Tanika N; Hidalgo, Bertha; Cupples, L Adrienne; Weeks, Daniel E; Hawley, Nicola L; Minster, Ryan L; Samoan Obesity, Lifestyle and Genetic Adaptations Study (OLaGA) Group; Deka, Ranjan; Naseri, Take T; de Las Fuentes, Lisa; Raffield, Laura M; Morrison, Alanna C; Vries, Paul S; Ballantyne, Christie M; Kenny, Eimear E; Rich, Stephen S; Whitsel, Eric A; Cho, Michael H; Shoemaker, M Benjamin; Pace, Betty S; Blangero, John; Palmer, Nicholette D; Mitchell, Braxton D; Shuldiner, Alan R; Barnes, Kathleen C; Redline, Susan; Kardia, Sharon L R; Abecasis, Gonçalo R; Becker, Lewis C; Heckbert, Susan R; He, Jiang; Post, Wendy; Arnett, Donna K; Vasan, Ramachandran S; Darbar, Dawood; Weiss, Scott T; McGarvey, Stephen T; de Andrade, Mariza; Chen, Yii-Der Ida; Kaplan, Robert C; Meyers, Deborah A; Custer, Brian S; Correa, Adolfo; Psaty, Bruce M; Fornage, Myriam; Manson, JoAnn E; Boerwinkle, Eric; Konkle, Barbara A; Loos, Ruth J F; Rotter, Jerome I; Silverman, Edwin K; Kooperberg, Charles; Danesh, John; Samani, Nilesh J; Jaiswal, Siddhartha; Libby, Peter; Ellinor, Patrick T; Pankratz, Nathan; Ebert, Benjamin L; Reiner, Alexander P; Mathias, Rasika A; Do, Ron; NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium; Natarajan, Pradeep | Science advances | 35385311 | 2022 Apr 08 |
| Optics-Free Chip-Scale Intraoperative Imaging Using NIR-Excited Upconverting Nanoparticles. | Najafiaghdam, Hossein; Pedroso, Cassio C S; Cohen, Bruce E; Anwar, Mekhail | IEEE transactions on biomedical circuits and systems | 35385388 | 2022 04 |
| Epithelial STAT6 O-GlcNAcylation drives a concerted anti-helminth alarmin response dependent on tuft cell hyperplasia and Gasdermin C. | Zhao, Ming; Ren, Kaiqun; Xiong, Xiwen; Xin, Yue; Zou, Yujie; Maynard, Jason C; Kim, Angela; Battist, Alexander P; Koneripalli, Navya; Wang, Yusu; Chen, Qianyue; Xin, Ruyue; Yang, Chenyan; Huang, Rong; Yu, Jiahui; Huang, Zan; Zhang, Zengdi; Wang, Haiguang; Wang, Daoyuan; Xiao, Yihui; Salgado, Oscar C; Jarjour, Nicholas N; Hogquist, Kristin A; Revelo, Xavier S; Burlingame, Alma L; Gao, Xiang; von Moltke, Jakob; Lin, Zhaoyu; Ruan, Hai-Bin | Immunity | 35385697 | 2022 04 12 |
| OBIF: an omics-based interaction framework to reveal molecular drivers of synergy. | Pantaleón García, Jezreel; Kulkarni, Vikram V; Reese, Tanner C; Wali, Shradha; Wase, Saima J; Zhang, Jiexin; Singh, Ratnakar; Caetano, Mauricio S; Kadara, Humam; Moghaddam, Seyed Javad; Johnson, Faye M; Wang, Jing; Wang, Yongxing; Evans, Scott E | NAR genomics and bioinformatics | 35387383 | 2022 Jun |
| Causal Gene Confusion: The Complicated EDN1/PHACTR1 Locus for Coronary Artery Disease. | Gupta, Rajat M | Arteriosclerosis, thrombosis, and vascular biology | 35387481 | 2022 May |
| Tuning T cell receptor sensitivity through catch bond engineering. | Zhao, Xiang; Kolawole, Elizabeth M; Chan, Waipan; Feng, Yinnian; Yang, Xinbo; Gee, Marvin H; Jude, Kevin M; Sibener, Leah V; Fordyce, Polly M; Germain, Ronald N; Evavold, Brian D; Garcia, K Christopher | Science (New York, N.Y.) | 35389803 | 2022 04 08 |
| The FUS::DDIT3 fusion oncoprotein inhibits BAF complex targeting and activity in myxoid liposarcoma. | Zullow, Hayley J; Sankar, Akshay; Ingram, Davis R; Samé Guerra, Daniel D; D'Avino, Andrew R; Collings, Clayton K; Lazcano, Rossana; Wang, Wei-Lien; Liang, Yu; Qi, Jun; Lazar, Alexander J; Kadoch, Cigall | Molecular cell | 35390276 | 2022 05 05 |
| Enhanced lipogenesis through Pparγ helps cavefish adapt to food scarcity. | Xiong, Shaolei; Wang, Wei; Kenzior, Alexander; Olsen, Luke; Krishnan, Jaya; Persons, Jenna; Medley, Kyle; Peuß, Robert; Wang, Yongfu; Chen, Shiyuan; Zhang, Ning; Thomas, Nancy; Miles, John M; Alvarado, Alejandro Sánchez; Rohner, Nicolas | Current biology : CB | 35390280 | 2022 May 23 |
| Skin Microbiome Variation with Cancer Progression in Human Cutaneous Squamous Cell Carcinoma. | Voigt, Anita Y; Emiola, Akintunde; Johnson, Jethro S; Fleming, Elizabeth S; Nguyen, Hoan; Zhou, Wei; Tsai, Kenneth Y; Fink, Christine; Oh, Julia | The Journal of investigative dermatology | 35390349 | 2022 Oct |
| Structural insight into protein-protein interactions between intestinal microbiome and host. | Post, Sarah E; Brito, Ilana L | Current opinion in structural biology | 35390637 | 2022 06 |
| Comprehensive analysis of DNA replication timing across 184 cell lines suggests a role for MCM10 in replication timing regulation. | Caballero, Madison; Ge, Tiffany; Rebelo, Ana Rita; Seo, Seungmae; Kim, Sean; Brooks, Kayla; Zuccaro, Michael; Kanagaraj, Radhakrishnan; Vershkov, Dan; Kim, Dongsung; Smogorzewska, Agata; Smolka, Marcus; Benvenisty, Nissim; West, Stephen C; Egli, Dieter; Mace, Emily M; Koren, Amnon | Human molecular genetics | 35394024 | 2022 Apr 08 |
| Phage anti-CBASS and anti-Pycsar nucleases subvert bacterial immunity. | Hobbs, Samuel J; Wein, Tanita; Lu, Allen; Morehouse, Benjamin R; Schnabel, Julia; Leavitt, Azita; Yirmiya, Erez; Sorek, Rotem; Kranzusch, Philip J | Nature | 35395152 | 2022 May |
| The Retinal Basis of Light Aversion in Neonatal Mice. | Caval-Holme, Franklin S; Aranda, Marcos L; Chen, Andy Q; Tiriac, Alexandre; Zhang, Yizhen; Smith, Benjamin; Birnbaumer, Lutz; Schmidt, Tiffany M; Feller, Marla B | The Journal of neuroscience : the official journal of the Society for Neuroscience | 35396331 | 2022 05 18 |
| Unlocking capacities of genomics for the COVID-19 response and future pandemics. | Knyazev, Sergey; Chhugani, Karishma; Sarwal, Varuni; Ayyala, Ram; Singh, Harman; Karthikeyan, Smruthi; Deshpande, Dhrithi; Baykal, Pelin Icer; Comarova, Zoia; Lu, Angela; Porozov, Yuri; Vasylyeva, Tetyana I; Wertheim, Joel O; Tierney, Braden T; Chiu, Charles Y; Sun, Ren; Wu, Aiping; Abedalthagafi, Malak S; Pak, Victoria M; Nagaraj, Shivashankar H; Smith, Adam L; Skums, Pavel; Pasaniuc, Bogdan; Komissarov, Andrey; Mason, Christopher E; Bortz, Eric; Lemey, Philippe; Kondrashov, Fyodor; Beerenwinkel, Niko; Lam, Tommy Tsan-Yuk; Wu, Nicholas C; Zelikovsky, Alex; Knight, Rob; Crandall, Keith A; Mangul, Serghei | Nature methods | 35396471 | 2022 04 |
| Antigen identification and high-throughput interaction mapping by reprogramming viral entry. | Dobson, Connor S; Reich, Anna N; Gaglione, Stephanie; Smith, Blake E; Kim, Ellen J; Dong, Jiayi; Ronsard, Larance; Okonkwo, Vintus; Lingwood, Daniel; Dougan, Michael; Dougan, Stephanie K; Birnbaum, Michael E | Nature methods | 35396484 | 2022 04 |
| A large-scale systematic survey reveals recurring molecular features of public antibody responses to SARS-CoV-2. | Wang, Yiquan; Yuan, Meng; Lv, Huibin; Peng, Jian; Wilson, Ian A; Wu, Nicholas C | Immunity | 35397794 | 2022 Mar 25 |
| Transient docking of synaptic vesicles: Implications and mechanisms. | Kusick, Grant F; Ogunmowo, Tyler H; Watanabe, Shigeki | Current opinion in neurobiology | 35398664 | 2022 06 |
| Capsaicin as an amphipathic modulator of NaV1.5 mechanosensitivity. | Cowan, Luke M; Strege, Peter R; Rusinova, Radda; Andersen, Olaf S; Farrugia, Gianrico; Beyder, Arthur | Channels (Austin, Tex.) | 35412435 | 2022 Dec |
| Dynamics of Drosophila endoderm specification. | Keenan, Shannon E; Avdeeva, Maria; Yang, Liu; Alber, Daniel S; Wieschaus, Eric F; Shvartsman, Stanislav Y | Proceedings of the National Academy of Sciences of the United States of America | 35412853 | 2022 04 12 |
| Prioritizing COVID-19 vaccination efforts and dose allocation within Madagascar. | Rasambainarivo, Fidisoa; Ramiadantsoa, Tanjona; Raherinandrasana, Antso; Randrianarisoa, Santatra; Rice, Benjamin L; Evans, Michelle V; Roche, Benjamin; Randriatsarafara, Fidiniaina Mamy; Wesolowski, Amy; Metcalf, Jessica C | BMC public health | 35413894 | 2022 04 12 |
| Site-Selective Deuteration of Amino Acids through Dual-Protein Catalysis. | Doyon, Tyler J; Buller, Andrew R | Journal of the American Chemical Society | 35416652 | 2022 04 27 |
| Dynamics of CTCF- and cohesin-mediated chromatin looping revealed by live-cell imaging. | Gabriele, Michele; Brandão, Hugo B; Grosse-Holz, Simon; Jha, Asmita; Dailey, Gina M; Cattoglio, Claudia; Hsieh, Tsung-Han S; Mirny, Leonid; Zechner, Christoph; Hansen, Anders S | Science (New York, N.Y.) | 35420890 | 2022 04 29 |
| Cupric Ions Selectively Modulate TRAAK-Phosphatidylserine Interactions. | Zhu, Yun; Schrecke, Samantha; Tang, Shuli; Odenkirk, Melanie T; Walker, Thomas; Stover, Lauren; Lyu, Jixing; Zhang, Tianqi; Russell, David; Baker, Erin S; Yan, Xin; Laganowsky, Arthur | Journal of the American Chemical Society | 35421309 | 2022 04 27 |
| Chromatin architecture in addiction circuitry identifies risk genes and potential biological mechanisms underlying cigarette smoking and alcohol use traits. | Sey, Nancy Y A; Hu, Benxia; Iskhakova, Marina; Lee, Sool; Sun, Huaigu; Shokrian, Neda; Ben Hutta, Gabriella; Marks, Jesse A; Quach, Bryan C; Johnson, Eric O; Hancock, Dana B; Akbarian, Schahram; Won, Hyejung | Molecular psychiatry | 35422469 | 2022 Apr 14 |
| Modular design of synthetic receptors for programmed gene regulation in cell therapies. | Zhu, Iowis; Liu, Raymond; Garcia, Julie M; Hyrenius-Wittsten, Axel; Piraner, Dan I; Alavi, Josef; Israni, Divya V; Liu, Bin; Khalil, Ahmad S; Roybal, Kole T | Cell | 35427499 | 2022 Apr 14 |
| Human Coronary Plaque T Cells Are Clonal and Cross-React to Virus and Self. | Chowdhury, Roshni Roy; D'Addabbo, Jessica; Huang, Xianxi; Veizades, Stefan; Sasagawa, Koki; Louis, David M; Cheng, Paul; Sokol, Jan; Jensen, Annie; Tso, Alexandria; Shankar, Vishnu; Wendel, Ben Shogo; Bakerman, Isaac; Liang, Grace; Koyano, Tiffany; Fong, | Circulation research | 35430876 | 2022 05 13 |
| Single-cell Damagenome Profiling by Linear Copying and Splitting based Whole Genome Amplification (LCS-WGA). | Niu, Yichi; Zhu, Qiangyuan; Zong, Chenghang | Bio-protocol | 35434195 | 2022 Mar 20 |
| The Chronic Wound Phageome: Phage Diversity and Associations with Wounds and Healing Outcomes. | Verbanic, Samuel; Deacon, John M; Chen, Irene A | Microbiology spectrum | 35435739 | 2022 Jun 29 |
| Immunotherapy of Neuroblastoma: Facts and Hopes. | Anderson, John; Majzner, Robbie G; Sondel, Paul M | Clinical cancer research : an official journal of the American Association for Cancer Research | 35435953 | 2022 Aug 02 |
| You got rhythm, or more: The multidimensionality of rhythmic abilities. | Fiveash, Anna; Bella, Simone Dalla; Bigand, Emmanuel; Gordon, Reyna L; Tillmann, Barbara | Attention, perception & psychophysics | 35437703 | 2022 May |
| Simultaneous monitoring of disease and microbe dynamics through plasma DNA sequencing in pediatric patients with acute lymphoblastic leukemia. | Barsan, Valentin; Xia, Yuntao; Klein, David; Gonzalez-Pena, Veronica; Youssef, Sarah; Inaba, Yuki; Mahmud, Ousman; Natarajan, Sivaraman; Agarwal, Vibhu; Pang, Yakun; Autry, Robert; Pui, Ching-Hon; Inaba, Hiroto; Evans, William; Gawad, Charles | Science advances | 35442732 | 2022 04 22 |
| ATG4A regulates human erythroid maturation and mitochondrial clearance. | Stolla, Massiel Chavez; Reilly, Andreea; Bergantinos, Rochelle; Stewart, Sintra; Thom, Neele; Clough, Courtnee A; Wellington, Rachel C; Stolitenko, Raisa; Abkowitz, Janis L; Doulatov, Sergei | Blood advances | 35443024 | 2022 06 28 |
| Inhibitory co-transmission from midbrain dopamine neurons relies on presynaptic GABA uptake. | Melani, Riccardo; Tritsch, Nicolas X | Cell reports | 35443174 | 2022 04 19 |
| Presentation of the Julius M. Friedenwald Medal to Timothy C. Wang, MD, AGAF. | Abrams, Julian; Camilleri, Michael; Merchant, Juanita; Rustgi, Anil K; Yan, Kelley | Gastroenterology | 35443933 | 2022 Jun |
| Somatic genomic changes in single Alzheimer's disease neurons. | Miller, Michael B; Huang, August Yue; Kim, Junho; Zhou, Zinan; Kirkham, Samantha L; Maury, Eduardo A; Ziegenfuss, Jennifer S; Reed, Hannah C; Neil, Jennifer E; Rento, Lariza; Ryu, Steven C; Ma, Chanthia C; Luquette, Lovelace J; Ames, Heather M; Oakley, Derek H; Frosch, Matthew P; Hyman, Bradley T; Lodato, Michael A; Lee, Eunjung Alice; Walsh, Christopher A | Nature | 35444284 | 2022 04 |
| Enhancing Single-Molecule Fluorescence Spectroscopy with Simple and Robust Hybrid Nanoapertures. | Kotnala, Abhay; Ding, Hongru; Zheng, Yuebing | ACS photonics | 35445142 | 2021 Jun 16 |
| LEtS set the tone. | Joshi, Vikram; Beyder, Arthur | The Journal of physiology | 35445403 | 2022 06 |
| Transcranial Pulsed-Current Stimulation versus Transcranial Direct Current Stimulation in Patients with Disorders of Consciousness: A Pilot, Sham-Controlled Cross-Over Double-Blind Study. | Barra, Alice; Rosenfelder, Martin; Mortaheb, Sepehr; Carrière, Manon; Martens, Geraldine; Bodien, Yelena G; Morales-Quezada, Leon; Bender, Andreas; Laureys, Steven; Thibaut, Aurore; Fregni, Felipe | Brain sciences | 35447961 | 2022 Mar 24 |
| Epithelial-immune crosstalk in health and disease. | Rosenblum, Daniel; Naik, Shruti | Current opinion in genetics & development | 35461159 | 2022 06 |
| DYVIC: DYnamic VIrus Control in Peru. | Lossio-Ventura, Juan Antonio; Alatrista-Salas, Hugo; Barrena, Kevin; Linos, Eleni; Nunez-Del-Prado, Miguel; Talavera, Alvaro | Proceedings. IEEE International Conference on Bioinformatics and Biomedicine | 35462884 | 2020 Dec |
| Integrating transcription-factor abundance with chromatin accessibility in human erythroid lineage commitment. | Baskar, Reema; Chen, Amy F; Favaro, Patricia; Reynolds, Warren; Mueller, Fabian; Borges, Luciene; Jiang, Sizun; Park, Hyun Shin; Kool, Eric T; Greenleaf, William J; Bendall, Sean C | Cell reports methods | 35463156 | 2022 Mar 28 |
| Neuronal mTOR Outposts: Implications for Translation, Signaling, and Plasticity. | Altas, Bekir; Romanowski, Andrea J; Bunce, Garrett W; Poulopoulos, Alexandros | Frontiers in cellular neuroscience | 35465614 | 2022 |
| Flexible use of memory by food-caching birds. | Applegate, Marissa C; Aronov, Dmitriy | eLife | 35467526 | 2022 04 25 |
| Intracellular Formation of a DNA Damage-Induced, Histone Post-Translational Modification Following Bleomycin Treatment. | Jacinto, Marco Paolo; Fried, Stephen D; Greenberg, Marc M | Journal of the American Chemical Society | 35467863 | 2022 05 04 |
| Antithetic effect of interferon-α on cell-free and cell-to-cell HIV-1 infection. | Kumata, Ryuichi; Iwanami, Shoya; Mar, Katrina B; Kakizoe, Yusuke; Misawa, Naoko; Nakaoka, Shinji; Koyanagi, Yoshio; Perelson, Alan S; Schoggins, John W; Iwami, Shingo; Sato, Kei | PLoS computational biology | 35468127 | 2022 04 |
| Geographic accessibility to health facilities predicts uptake of community-based tuberculosis screening in an urban setting. | Jenkins, Helen E; Ayuk, Sally; Puma, Daniela; Brooks, Meredith B; Millones, Ana Karina; Jimenez, Judith; Lecca, Leonid; Galea, Jerome T; Becerra, Mercedes; Keshavjee, Salmaan; Yuen, Courtney M | International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases | 35470023 | 2022 Apr 22 |
| Meiotic cDNA libraries reveal gene truncations and mitochondrial proteins important for competitive fitness in Saccharomyces cerevisiae. | Sing, Tina L; Conlon, Katie; Lu, Stephanie H; Madrazo, Nicole; Morse, Kaitlin; Barker, Juliet C; Hollerer, Ina; Brar, Gloria A; Sudmant, Peter H; Ünal, Elçin | Genetics | 35471663 | 2022 05 31 |
| The endoplasmic reticulum adopts two distinct tubule forms. | Wang, Bowen; Zhao, Zhiheng; Xiong, Michael; Yan, Rui; Xu, Ke | Proceedings of the National Academy of Sciences of the United States of America | 35471903 | 2022 May 03 |
| JAK inhibitor blocks COVID-19 cytokine-induced JAK/STAT/APOL1 signaling in glomerular cells and podocytopathy in human kidney organoids. | Nystrom, Sarah E; Li, Guojie; Datta, Somenath; Soldano, Karen L; Silas, Daniel; Weins, Astrid; Hall, Gentzon; Thomas, David B; Olabisi, Opeyemi A | JCI insight | 35472001 | 2022 06 08 |
| Atomistic modeling and rational design of optothermal tweezers for targeted applications. | Ding, Hongru; Kollipara, Pavana Siddhartha; Lin, Linhan; Zheng, Yuebing | Nano research | 35475031 | 2021 Jan |
| Dissociation of nanosilicates induces downstream endochondral differentiation gene expression program. | Brokesh, Anna M; Cross, Lauren M; Kersey, Anna L; Murali, Aparna; Richter, Christopher; Gregory, Carl A; Singh, Irtisha; Gaharwar, Akhilesh K | Science advances | 35476448 | 2022 Apr 29 |
| Investigation of β-Substitution Activity of O-Acetylserine Sulfhydrolase from Citrullus vulgaris. | Smith, Jamorious L; Harrison, Isa Madrigal; Bingman, Craig A; Buller, Andrew R | Chembiochem : a European journal of chemical biology | 35476889 | 2022 Jul 19 |
| β-Hydroxybutyrate suppresses colorectal cancer. | Dmitrieva-Posocco, Oxana; Wong, Andrea C; Lundgren, Patrick; Golos, Aleksandra M; Descamps, Hélène C; Dohnalová, Lenka; Cramer, Zvi; Tian, Yuhua; Yueh, Brian; Eskiocak, Onur; Egervari, Gabor; Lan, Yemin; Liu, Jinping; Fan, Jiaxin; Kim, Jihee; Madhu, Bhoomi; Schneider, Kai Markus; Khoziainova, Svetlana; Andreeva, Natalia; Wang, Qiaohong; Li, Ning; Furth, Emma E; Bailis, Will; Kelsen, Judith R; Hamilton, Kathryn E; Kaestner, Klaus H; Berger, Shelley L; Epstein, Jonathan A; Jain, Rajan; Li, Mingyao; Beyaz, Semir; Lengner, Christopher J; Katona, Bryson W; Grivennikov, Sergei I; Thaiss, Christoph A; Levy, Maayan | Nature | 35477756 | 2022 05 |
| Biomaterials to enhance stem cell transplantation. | Kharbikar, Bhushan N; Mohindra, Priya; Desai, Tejal A | Cell stem cell | 35483364 | 2022 05 05 |
| In situ identification of cellular drug targets in mammalian tissue. | Pang, Zhengyuan; Schafroth, Michael A; Ogasawara, Daisuke; Wang, Yu; Nudell, Victoria; Lal, Neeraj K; Yang, Dong; Wang, Kristina; Herbst, Dylan M; Ha, Jacquelyn; Guijas, Carlos; Blankman, Jacqueline L; Cravatt, Benjamin F; Ye, Li | Cell | 35483372 | 2022 May 12 |
| Enhanced safety and efficacy of protease-regulated CAR-T cell receptors. | Labanieh, Louai; Majzner, Robbie G; Klysz, Dorota; Sotillo, Elena; Fisher, Chris J; Vilches-Moure, José G; Pacheco, Kaithlen Zen B; Malipatlolla, Meena; Xu, Peng; Hui, Jessica H; Murty, Tara; Theruvath, Johanna; Mehta, Nishant; Yamada-Hunter, Sean A; Weber, Evan W; Heitzeneder, Sabine; Parker, Kevin R; Satpathy, Ansuman T; Chang, Howard Y; Lin, Michael Z; Cochran, Jennifer R; Mackall, Crystal L | Cell | 35483375 | 2022 05 12 |
| Single-stranded nucleic acid binding and coacervation by linker histone H1. | Leicher, Rachel; Osunsade, Adewola; Chua, Gabriella N L; Faulkner, Sarah C; Latham, Andrew P; Watters, John W; Nguyen, Tuan; Beckwitt, Emily C; Christodoulou-Rubalcava, Sophia; Young, Paul G; Zhang, Bin; David, Yael; Liu, Shixin | Nature structural & molecular biology | 35484234 | 2022 May |
| Genetically encoded tools for measuring and manipulating metabolism. | Choe, Mangyu; Titov, Denis V | Nature chemical biology | 35484256 | 2022 May |
| Overcoming differential tumor penetration of BRAF inhibitors using computationally guided combination therapy. | Ng, Thomas S C; Hu, Huiyu; Kronister, Stefan; Lee, Chanseo; Li, Ran; Gerosa, Luca; Stopka, Sylwia A; Burgenske, Danielle M; Khurana, Ishaan; Regan, Michael S; Vallabhaneni, Sreeram; Putta, Niharika; Scott, Ella; Matvey, Dylan; Giobbie-Hurder, Anita; Kohler, Rainer H; Sarkaria, Jann N; Parangi, Sareh; Sorger, Peter K; Agar, Nathalie Y R; Jacene, Heather A; Sullivan, Ryan J; Buchbinder, Elizabeth; Mikula, Hannes; Weissleder, Ralph; Miller, Miles A | Science advances | 35486732 | 2022 Apr 29 |
| Computational profiling of hiPSC-derived heart organoids reveals chamber defects associated with NKX2-5 deficiency. | Feng, Wei; Schriever, Hannah; Jiang, Shan; Bais, Abha; Wu, Haodi; Kostka, Dennis; Li, Guang | Communications biology | 35488063 | 2022 Apr 29 |
| Neurophotonic tools for microscopic measurements and manipulation: status report. | Abdelfattah, Ahmed S; Ahuja, Sapna; Akkin, Taner; Allu, Srinivasa Rao; Brake, Joshua; Boas, David A; Buckley, Erin M; Campbell, Robert E; Chen, Anderson I; Cheng, Xiaojun; Čižmár, Tomáš; Costantini, Irene; De Vittorio, Massimo; Devor, Anna; Doran, Patrick | Neurophotonics | 35493335 | 2022 Jan |
| Fluorogenic DNA-PAINT for faster, low-background super-resolution imaging. | Chung, Kenny K H; Zhang, Zhao; Kidd, Phylicia; Zhang, Yongdeng; Williams, Nathan D; Rollins, Bennett; Yang, Yang; Lin, Chenxiang; Baddeley, David; Bewersdorf, Joerg | Nature methods | 35501386 | 2022 May |
| High-throughput analysis of single human cells reveals the complex nature of DNA replication timing control. | Massey, Dashiell J; Koren, Amnon | Nature communications | 35504890 | 2022 05 03 |
| Profiling the Landscape of Drug Resistance Mutations in Neosubstrates to Molecular Glue Degraders. | Gosavi, Pallavi M; Ngan, Kevin C; Yeo, Megan J R; Su, Cindy; Li, Jiaming; Lue, Nicholas Z; Hoenig, Samuel M; Liau, Brian B | ACS central science | 35505873 | 2022 Apr 27 |
| The essential M. tuberculosis Clp protease is functionally asymmetric in vivo. | d'Andrea, Felipe B; Poulton, Nicholas C; Froom, Ruby; Tam, Kayan; Campbell, Elizabeth A; Rock, Jeremy M | Science advances | 35507665 | 2022 05 06 |
| Glycine decarboxylase maintains mitochondrial protein lipoylation to support tumor growth. | Mukha, Dzmitry; Fokra, Mariam; Feldman, Alona; Sarvin, Boris; Sarvin, Nikita; Nevo-Dinur, Keren; Besser, Elazar; Hallo, Elior; Aizenshtein, Elina; Schug, Zachary T; Shlomi, Tomer | Cell metabolism | 35508111 | 2022 05 03 |
| An extended amygdala-midbrain circuit controlling cocaine withdrawal-induced anxiety and reinstatement. | Tian, Guilian; Hui, May; Macchia, Desiree; Derdeyn, Pieter; Rogers, Alexandra; Hubbard, Elizabeth; Liu, Chengfeng; Vasquez, Jose J; Taniguchi, Lara; Bartas, Katrina; Carroll, Sean; Beier, Kevin T | Cell reports | 35508124 | 2022 05 03 |
| Differences in spike generation instead of synaptic inputs determine the feature selectivity of two retinal cell types. | Wienbar, Sophia; Schwartz, Gregory William | Neuron | 35508174 | 2022 07 06 |
| 3D Reconstruction of cellular images from microfabricated imagers using fully-adaptive deep neural networks. | Najafiaghdam, Hossein; Rabbani, Rozhan; Gharia, Asmaysinh; Papageorgiou, Efthymios P; Anwar, Mekhail | Scientific reports | 35508477 | 2022 May 04 |
| Mosquito brains encode unique features of human odour to drive host seeking. | Zhao, Zhilei; Zung, Jessica L; Hinze, Annika; Kriete, Alexis L; Iqbal, Azwad; Younger, Meg A; Matthews, Benjamin J; Merhof, Dorit; Thiberge, Stephan; Ignell, Rickard; Strauch, Martin; McBride, Carolyn S | Nature | 35508661 | 2022 05 |
| Surface-enhanced Raman scattering: An emerging tool for sensing cellular function. | Tanwar, Swati; Kim, Jeong Hee; Bulte, Jeff W M; Barman, Ishan | Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology | 35510405 | 2022 May 05 |
| Single-cell genomic profiling of human dopamine neurons identifies a population that selectively degenerates in Parkinson's disease. | Kamath, Tushar; Abdulraouf, Abdulraouf; Burris, S J; Langlieb, Jonah; Gazestani, Vahid; Nadaf, Naeem M; Balderrama, Karol; Vanderburg, Charles; Macosko, Evan Z | Nature neuroscience | 35513515 | 2022 May |
| Systematic characterization of gene function in the photosynthetic alga Chlamydomonas reinhardtii. | Fauser, Friedrich; Vilarrasa-Blasi, Josep; Onishi, Masayuki; Ramundo, Silvia; Patena, Weronika; Millican, Matthew; Osaki, Jacqueline; Philp, Charlotte; Nemeth, Matthew; Salomé, Patrice A; Li, Xiaobo; Wakao, Setsuko; Kim, Rick G; Kaye, Yuval; Grossman, Arthur R; Niyogi, Krishna K; Merchant, Sabeeha S; Cutler, Sean R; Walter, Peter; Dinneny, José R; Jonikas, Martin C; Jinkerson, Robert E | Nature genetics | 35513725 | 2022 05 |
| Cardiac endocardial left atrial substrate and lesion depth mapping using near-infrared spectroscopy. | Park, Soo Young; Yang, Haiqiu; Marboe, Charles; Ziv, Ohad; Laurita, Kenneth; Rollins, Andrew; Saluja, Deepak; Hendon, Christine P | Biomedical optics express | 35519253 | 2022 Apr 01 |
| Super-Resolution Vibrational Imaging Using Expansion Stimulated Raman Scattering Microscopy. | Shi, Lixue; Klimas, Aleksandra; Gallagher, Brendan; Cheng, Zhangyu; Fu, Feifei; Wijesekara, Piyumi; Miao, Yupeng; Ren, Xi; Zhao, Yongxin; Min, Wei | Advanced science (Weinheim, Baden-Wurttemberg, Germany) | 35521971 | 2022 07 |
| Stem-cell-derived trophoblast organoids model human placental development and susceptibility to emerging pathogens. | Karvas, Rowan M; Khan, Shafqat A; Verma, Sonam; Yin, Yan; Kulkarni, Devesha; Dong, Chen; Park, Kyoung-Mi; Chew, Brian; Sane, Eshan; Fischer, Laura A; Kumar, Deepak; Ma, Liang; Boon, Adrianus C M; Dietmann, Sabine; Mysorekar, Indira U; Theunissen, Thorold W | Cell stem cell | 35523141 | 2022 May 05 |
| The interactions between DNA nanostructures and cells: A critical overview from a cell biology perspective. | Frtús, Adam; Smolková, Barbora; Uzhytchak, Mariia; Lunova, Mariia; Jirsa, Milan; Henry, Skylar J W; Dejneka, Alexandr; Stephanopoulos, Nicholas; Lunov, Oleg | Acta biomaterialia | 35523414 | 2022 07 01 |
| Investigating Fungal Biosynthetic Pathways Using Pichia pastoris as a Heterologous Host. | Qian, Zhilan; Liu, Qi; Cai, Menghao | Methods in molecular biology (Clifton, N.J.) | 35524048 | 2022 |
| Investigating Plant Biosynthetic Pathways Using Heterologous Gene Expression: Yeast as a Heterologous Host. | Xu, Shanhui; Wu, Sheng; Li, Yanran | Methods in molecular biology (Clifton, N.J.) | 35524060 | 2022 |
| Methods for discovering catalytic activities for pseudokinases. | Black, Miles H; Gradowski, Marcin; Pawłowski, Krzysztof; Tagliabracci, Vincent S | Methods in enzymology | 35525554 | 2022 |
| Plasmid and Sequencing Library Preparation for CRISPRi Barcoded Expression Reporter Sequencing (CiBER-seq) in Saccharomyces cerevisiae. | Muller, Ryan Y; Meacham, Zuriah A; Ingolia, Nicholas T | Bio-protocol | 35530514 | 2022 Apr 05 |
| A LAMP sequencing approach for high-throughput co-detection of SARS-CoV-2 and influenza virus in human saliva. | Warneford-Thomson, Robert; Shah, Parisha P; Lundgren, Patrick; Lerner, Jonathan; Morgan, Jason; Davila, Antonio; Abella, Benjamin S; Zaret, Kenneth; Schug, Jonathan; Jain, Rajan; Thaiss, Christoph A; Bonasio, Roberto | eLife | 35532013 | 2022 May 09 |
| Halo-seq: An RNA Proximity Labeling Method for the Isolation and Analysis of Subcellular RNA Populations. | Lo, Hei-Yong G; Engel, Krysta L; Goering, Raeann; Li, Ying; Spitale, Robert C; Taliaferro, J Matthew | Current protocols | 35532287 | 2022 May |
| Plasmodium's fight for survival: escaping elimination while acquiring nutrients. | Schroeder, Erin A; Chirgwin, Michael E; Derbyshire, Emily R | Trends in parasitology | 35534377 | 2022 07 |
| Immunization using ApoB-100 peptide-linked nanoparticles reduces atherosclerosis. | Chyu, Kuang-Yuh; Zhao, Xiaoning; Zhou, Jianchang; Dimayuga, Paul C; Lio, Nicole Wm; Cercek, Bojan; Trac, Noah T; Chung, Eun Ji; Shah, Prediman K | JCI insight | 35536648 | 2022 06 08 |
| Computational Approaches for Understanding Sequence Variation Effects on the 3D Genome Architecture. | Avdeyev, Pavel; Zhou, Jian | Annual review of biomedical data science | 35537461 | 2022 08 10 |
| A genome-wide CRISPR-Cas9 knockout screen identifies essential and growth-restricting genes in human trophoblast stem cells. | Dong, Chen; Fu, Shuhua; Karvas, Rowan M; Chew, Brian; Fischer, Laura A; Xing, Xiaoyun; Harrison, Jessica K; Popli, Pooja; Kommagani, Ramakrishna; Wang, Ting; Zhang, Bo; Theunissen, Thorold W | Nature communications | 35538076 | 2022 05 10 |
| Cell Wall Damage Reveals Spatial Flexibility in Peptidoglycan Synthesis and a Nonredundant Role for RodA in Mycobacteria. | Melzer, Emily S; Kado, Takehiro; García-Heredia, Alam; Gupta, Kuldeepkumar Ramnaresh; Meniche, Xavier; Morita, Yasu S; Sassetti, Christopher M; Rego, E Hesper; Siegrist, M Sloan | Journal of bacteriology | 35543537 | 2022 06 21 |
| Superresolution microscopy reveals actomyosin dynamics in medioapical arrays. | Moore, Regan P; Fogerson, Stephanie M; Tulu, U Serdar; Yu, Jason W; Cox, Amanda H; Sican, Melissa A; Li, Dong; Legant, Wesley R; Weigel, Aubrey V; Crawford, Janice M; Betzig, Eric; Kiehart, Daniel P | Molecular biology of the cell | 35544300 | 2022 09 15 |
| A 300-fold conductivity increase in microbial cytochrome nanowires due to temperature-induced restructuring of hydrogen bonding networks. | Dahl, Peter J; Yi, Sophia M; Gu, Yangqi; Acharya, Atanu; Shipps, Catharine; Neu, Jens; O'Brien, J Patrick; Morzan, Uriel N; Chaudhuri, Subhajyoti; Guberman-Pfeffer, Matthew J; Vu, Dennis; Yalcin, Sibel Ebru; Batista, Victor S; Malvankar, Nikhil S | Science advances | 35544567 | 2022 May 13 |
| Activation of Xist by an evolutionarily conserved function of KDM5C demethylase. | Samanta, Milan Kumar; Gayen, Srimonta; Harris, Clair; Maclary, Emily; Murata-Nakamura, Yumie; Malcore, Rebecca M; Porter, Robert S; Garay, Patricia M; Vallianatos, Christina N; Samollow, Paul B; Iwase, Shigeki; Kalantry, Sundeep | Nature communications | 35545632 | 2022 05 11 |
| Structural Basis for Allostery in PLP-dependent Enzymes. | Tran, Jenny U; Brown, Breann L | Frontiers in molecular biosciences | 35547395 | 2022 |
| Early life host-microbe interactions in skin. | Dwyer, Laura R; Scharschmidt, Tiffany C | Cell host & microbe | 35550671 | 2022 05 11 |
| Genome-wide analysis of cis-regulatory changes underlying metabolic adaptation of cavefish. | Krishnan, Jaya; Seidel, Chris W; Zhang, Ning; Singh, Narendra Pratap; VanCampen, Jake; Peuß, Robert; Xiong, Shaolei; Kenzior, Alexander; Li, Hua; Conaway, Joan W; Rohner, Nicolas | Nature genetics | 35551306 | 2022 05 |
| Sequence-based modeling of three-dimensional genome architecture from kilobase to chromosome scale. | Zhou, Jian | Nature genetics | 35551308 | 2022 May |
| Structural imaging studies of patients with chronic pain: an anatomical likelihood estimate meta-analysis. | Henn, Alina T; Larsen, Bart; Frahm, Lennart; Xu, Anna; Adebimpe, Azeez; Scott, J Cobb; Linguiti, Sophia; Sharma, Vaishnavi; Basbaum, Allan I; Corder, Gregory; Dworkin, Robert H; Edwards, Robert R; Woolf, Clifford J; Habel, Ute; Eickhoff, Simon B; Eickhoff | Pain | 35560117 | 2022 May 13 |
| Variant-specific vaccination induces systems immune responses and potent in vivo protection against SARS-CoV-2. | Peng, Lei; Renauer, Paul A; Ökten, Arya; Fang, Zhenhao; Park, Jonathan J; Zhou, Xiaoyu; Lin, Qianqian; Dong, Matthew B; Filler, Renata; Xiong, Qiancheng; Clark, Paul; Lin, Chenxiang; Wilen, Craig B; Chen, Sidi | Cell reports. Medicine | 35561673 | 2022 05 17 |
| Disrupting autorepression circuitry generates "open-loop lethality" to yield escape-resistant antiviral agents. | Chaturvedi, Sonali; Pablo, Michael; Wolf, Marie; Rosas-Rivera, Daniel; Calia, Giuliana; Kumar, Arjun J; Vardi, Noam; Du, Kelvin; Glazier, Joshua; Ke, Ruian; Chan, Matilda F; Perelson, Alan S; Weinberger, Leor S | Cell | 35561685 | 2022 Jun 09 |
| Host cells subdivide nutrient niches into discrete biogeographical microhabitats for gut microbes. | Liou, Megan J; Miller, Brittany M; Litvak, Yael; Nguyen, Henry; Natwick, Dean E; Savage, Hannah P; Rixon, Jordan A; Mahan, Scott P; Hiyoshi, Hirotaka; Rogers, Andrew W L; Velazquez, Eric M; Butler, Brian P; Collins, Sean R; McSorley, Stephen J; Harshey, Rasika M; Byndloss, Mariana X; Simon, Scott I; Bäumler, Andreas J | Cell host & microbe | 35568027 | 2022 06 08 |
| Electrophysiological correlates of thalamocortical function in acute severe traumatic brain injury. | Curley, William H; Bodien, Yelena G; Zhou, David W; Conte, Mary M; Foulkes, Andrea S; Giacino, Joseph T; Victor, Jonathan D; Schiff, Nicholas D; Edlow, Brian L | Cortex; a journal devoted to the study of the nervous system and behavior | 35569326 | 2022 07 |
| Hydroxycholesterol substitution in ionizable lipid nanoparticles for mRNA delivery to T cells. | Patel, Savan K; Billingsley, Margaret M; Frazee, Caitlin; Han, Xuexiang; Swingle, Kelsey L; Qin, Jingya; Alameh, Mohamad-Gabriel; Wang, Karin; Weissman, Drew; Mitchell, Michael J | Journal of controlled release : official journal of the Controlled Release Society | 35569584 | 2022 07 |
| Biologically Derived Neoproteoglycans for Profiling Protein-Glycosaminoglycan Interactions. | Porell, Ryan N; Follmar, Julianna L; Purcell, Sean C; Timm, Bryce; Laubach, Logan K; Kozirovskiy, David; Thacker, Bryan E; Glass, Charles A; Gordts, Philip L S M; Godula, Kamil | ACS chemical biology | 35574759 | 2022 06 17 |
| The Oscillating Gut Microbiome and Its Effects on Host Circadian Biology. | Litichevskiy, Lev; Thaiss, Christoph A | Annual review of nutrition | 35576592 | 2022 08 22 |
| The Astrin-SKAP complex reduces friction at the kinetochore-microtubule interface. | Rosas-Salvans, Miquel; Sutanto, Renaldo; Suresh, Pooja; Dumont, Sophie | Current biology : CB | 35580605 | 2022 Jun 20 |
| Label-Free Vibrational and Quantitative Phase Microscopy Reveals Remarkable Pathogen-Induced Morphomolecular Divergence in Tumor-Derived Cells. | Liu, Zhenhui; Parida, Sheetal; Wu, Shaoguang; Sears, Cynthia L; Sharma, Dipali; Barman, Ishan | ACS sensors | 35583030 | 2022 05 27 |
| A Photoacoustic-Fluorescent Imaging Probe for Proteolytic Gingipains Expressed by Porphyromonas gingivalis. | Moore, Colman; Cheng, Yong; Tjokro, Natalia; Zhang, Brendan; Kerr, Matthew; Hayati, Mohammed; Chang, Kai Chiao Joe; Shah, Nisarg; Chen, Casey; Jokerst, Jesse V | Angewandte Chemie (International ed. in English) | 35583940 | 2022 07 25 |
| Local chromatin context regulates the genetic requirements of the heterochromatin spreading reaction. | Greenstein, R A; Ng, Henry; Barrales, Ramon R; Tan, Catherine; Braun, Sigurd; Al-Sady, Bassem | PLoS genetics | 35584134 | 2022 05 |
| Choice-selective sequences dominate in cortical relative to thalamic inputs to NAc to support reinforcement learning. | Parker, Nathan F; Baidya, Avinash; Cox, Julia; Haetzel, Laura M; Zhukovskaya, Anna; Murugan, Malavika; Engelhard, Ben; Goldman, Mark S; Witten, Ilana B | Cell reports | 35584665 | 2022 May 17 |
| Isolation disrupts social interactions and destabilizes brain development in bumblebees. | Wang, Z Yan; McKenzie-Smith, Grace C; Liu, Weijie; Cho, Hyo Jin; Pereira, Talmo; Dhanerawala, Zahra; Shaevitz, Joshua W; Kocher, Sarah D | Current biology : CB | 35584698 | 2022 Jun 20 |
| ENPP1's regulation of extracellular cGAMP is a ubiquitous mechanism of attenuating STING signaling. | Carozza, Jacqueline A; Cordova, Anthony F; Brown, Jenifer A; AlSaif, Yasmeen; Böhnert, Volker; Cao, Xujun; Mardjuki, Rachel E; Skariah, Gemini; Fernandez, Daniel; Li, Lingyin | Proceedings of the National Academy of Sciences of the United States of America | 35588451 | 2022 May 24 |
| In silico assessment of electrophysiological neuronal recordings mediated by magnetoelectric nanoparticles. | Bok, Ilhan; Haber, Ido; Qu, Xiaofei; Hai, Aviad | Scientific reports | 35589877 | 2022 May 19 |
| Localization of EccA3 at the growing pole in Mycobacterium smegmatis. | Kriel, Nastassja L; Newton-Foot, Mae; Bennion, Owen T; Aldridge, Bree B; Mehaffy, Carolina; Belisle, John T; Walzl, Gerhard; Warren, Robin M; Sampson, Samantha L; Gey van Pittius, Nico C | BMC microbiology | 35590245 | 2022 05 19 |
| Beyond circadian rhythms: Emerging roles of ultradian rhythms in control of liver functions. | Asher, Gad; Zhu, Bokai | Hepatology (Baltimore, Md.) | 35591797 | 2022 May 19 |
| Systematic characterization of effect of flow rates and buffer compositions on double emulsion droplet volumes and stability. | Calhoun, Suzanne G K; Brower, Kara K; Suja, Vineeth Chandran; Kim, Gaeun; Wang, Ningning; McCully, Alexandra L; Kusumaatmaja, Halim; Fuller, Gerald G; Fordyce, Polly M | Lab on a chip | 35593127 | 2022 06 14 |
| Opto-Thermocapillary Nanomotors on Solid Substrates. | Li, Jingang; Kollipara, Pavana Siddhartha; Liu, Ya; Yao, Kan; Liu, Yaoran; Zheng, Yuebing | ACS nano | 35594375 | 2022 Jun 28 |
| Ultra-Sharp Nanowire Arrays Natively Permeate, Record, and Stimulate Intracellular Activity in Neuronal and Cardiac Networks. | Liu, Ren; Lee, Jihwan; Tchoe, Youngbin; Pre, Deborah; Bourhis, Andrew M; D'Antonio-Chronowska, Agnieszka; Robin, Gaelle; Lee, Sang Heon; Ro, Yun Goo; Vatsyayan, Ritwik; Tonsfeldt, Karen J; Hossain, Lorraine A; Phipps, M Lisa; Yoo, Jinkyoung; Nogan, John; Martinez, Jennifer S; Frazer, Kelly A; Bang, Anne G; Dayeh, Shadi A | Advanced functional materials | 35603230 | 2022 Feb 16 |
| Modified viral-genetic mapping reveals local and global connectivity relationships of ventral tegmental area dopamine cells. | Beier, Kevin | eLife | 35604019 | 2022 05 23 |
| Thermally Functional Liquid Crystal Networks by Magnetic Field Driven Molecular Orientation. | Shin, Jungwoo; Kang, Minjee; Tsai, Tsunghan; Leal, Cecilia; Braun, Paul V; Cahill, David G | ACS macro letters | 35607211 | 2016 Aug 16 |
| Longitudinal profiling of clonal hematopoiesis provides insight into clonal dynamics. | Uddin, Md Mesbah; Zhou, Ying; Bick, Alexander G; Burugula, Bala Bharathi; Jaiswal, Siddhartha; Desai, Pinkal; Honigberg, Michael C; Love, Shelly-Ann; Barac, Ana; Hayden, Kathleen M; Manson, JoAnn E; Whitsel, Eric A; Kooperberg, Charles; Natarajan, Pradeep | Immunity & ageing : I & A | 35610705 | 2022 May 24 |
| Molecular analysis of a public cross-neutralizing antibody response to SARS-CoV-2. | Yuan, Meng; Wang, Yiquan; Lv, Huibin; Wilson, Ian A; Wu, Nicholas C | bioRxiv : the preprint server for biology | 35611339 | 2022 May 18 |
| Rapid Profiling of Tumor-Immune Interaction Using Acoustically Assembled Patient-Derived Cell Clusters. | Ao, Zheng; Wu, Zhuhao; Cai, Hongwei; Hu, Liya; Li, Xiang; Kaurich, Connor; Chang, Jackson; Gu, Mingxia; Cheng, Liang; Lu, Xin; Guo, Feng | Advanced science (Weinheim, Baden-Wurttemberg, Germany) | 35611994 | 2022 08 |
| Chromatin profiles classify castration-resistant prostate cancers suggesting therapeutic targets. | Tang, Fanying; Xu, Duo; Wang, Shangqian; Wong, Chen Khuan; Martinez-Fundichely, Alexander; Lee, Cindy J; Cohen, Sandra; Park, Jane; Hill, Corinne E; Eng, Kenneth; Bareja, Rohan; Han, Teng; Liu, Eric Minwei; Palladino, Ann; Di, Wei; Gao, Dong; Abida, Wassim; Beg, Shaham; Puca, Loredana; Meneses, Maximiliano; de Stanchina, Elisa; Berger, Michael F; Gopalan, Anuradha; Dow, Lukas E; Mosquera, Juan Miguel; Beltran, Himisha; Sternberg, Cora N; Chi, Ping; Scher, Howard I; Sboner, Andrea; Chen, Yu; Khurana, Ekta | Science (New York, N.Y.) | 35617398 | 2022 05 27 |
| Longitudinal Molecular Profiling of Circulating Tumor Cells in Metastatic Renal Cell Carcinoma. | Bootsma, Matthew; McKay, Rana R; Emamekhoo, Hamid; Bade, Rory M; Schehr, Jennifer L; Mannino, Matthew C; Singh, Anupama; Wolfe, Serena K; Schultz, Zachery D; Sperger, Jamie; Xie, Wanling; Signoretti, Sabina; Kyriakopoulos, Christos E; Kosoff, David; Abel, Edwin J; Helzer, Kyle T; Rydzewski, Nicholas; Bakhtiar, Hamza; Shi, Yue; Blitzer, Grace; Bassetti, Michael; Floberg, John; Yu, Menggang; Sethakorn, Nan; Sharifi, Marina; Harari, Paul M; Choueiri, Toni K; Lang, Joshua M; Zhao, Shuang G | Journal of clinical oncology : official journal of the American Society of Clinical Oncology | 35617646 | 2022 May 26 |
| Coevolution of motor cortex and behavioral specializations associated with flight and echolocation in bats. | Halley, Andrew C; Baldwin, Mary K L; Cooke, Dylan F; Englund, Mackenzie; Pineda, Carlos R; Schmid, Tobias; Yartsev, Michael M; Krubitzer, Leah | Current biology : CB | 35617952 | 2022 07 11 |
| Circularized fluorescent nanodiscs for probing protein-lipid interactions. | Ren, Qian; Zhang, Shanwen; Bao, Huan | Communications biology | 35618817 | 2022 May 26 |
| Modeling Human Heart Development and Congenital Defects Using Organoids: How Close Are We? | Jiang, Shan; Feng, Wei; Chang, Cindy; Li, Guang | Journal of cardiovascular development and disease | 35621836 | 2022 Apr 21 |
| Exploration of Primary Care Clinician Attitudes and Cognitive Characteristics Associated With Prescribing Antibiotics for Asymptomatic Bacteriuria. | Baghdadi, Jonathan D; Korenstein, Deborah; Pineles, Lisa; Scherer, Laura D; Lydecker, Alison D; Magder, Larry; Stevens, Deborah N; Morgan, Daniel J | JAMA network open | 35622364 | 2022 05 02 |
| Microgels Formed by Spontaneous Click Chemistries Utilizing Microfluidic Flow Focusing for Cargo Release in Response to Endogenous or Exogenous Stimuli. | LeValley, Paige J; Parsons, Amanda L; Sutherland, Bryan P; Kiick, Kristi L; Oakey, John S; Kloxin, April M | Pharmaceutics | 35631649 | 2022 May 15 |
| Macrophage Cx43 Is Necessary for Fibroblast Cytosolic Calcium and Lung Fibrosis After Injury. | Bhattacharyya, Aritra; Torre, Paola; Yadav, Preeti; Boostanpour, Kaveh; Chen, Tian Y; Tsukui, Tatsuya; Sheppard, Dean; Muramatsu, Rieko; Seed, Robert I; Nishimura, Stephen L; Jung, James B; Tang, Xin-Zi; Allen, Christopher D C; Bhattacharya, Mallar | Frontiers in immunology | 35634278 | 2022 |
| Nano-bio interactions of 2D molybdenum disulfide. | Roy, Shounak; Deo, Kaivalya A; Singh, Kanwar Abhay; Lee, Hung Pang; Jaiswal, Amit; Gaharwar, Akhilesh K | Advanced drug delivery reviews | 35636569 | 2022 08 |
| CRISPRi chemical genetics and comparative genomics identify genes mediating drug potency in Mycobacterium tuberculosis. | Li, Shuqi; Poulton, Nicholas C; Chang, Jesseon S; Azadian, Zachary A; DeJesus, Michael A; Ruecker, Nadine; Zimmerman, Matthew D; Eckartt, Kathryn A; Bosch, Barbara; Engelhart, Curtis A; Sullivan, Daniel F; Gengenbacher, Martin; Dartois, Véronique A; Schnappinger, Dirk; Rock, Jeremy M | Nature microbiology | 35637331 | 2022 06 |
| Interspecies commensal interactions have nonlinear impacts on host immunity. | Rice, Tyler A; Bielecka, Agata A; Nguyen, Mytien T; Rosen, Connor E; Song, Deguang; Sonnert, Nicole D; Yang, Yi; Cao, Yiyun; Khetrapal, Varnica; Catanzaro, Jason R; Martin, Anjelica L; Rashed, Saleh A; Leopold, Shana R; Hao, Liming; Yu, Xuezhu; van Dijk, David; Ring, Aaron M; Flavell, Richard A; de Zoete, Marcel R; Palm, Noah W | Cell host & microbe | 35640610 | 2022 07 13 |
| Minian an open-source miniscope analysis pipeline. | Dong, Zhe; Mau, William; Feng, Yu; Pennington, Zachary T; Chen, Lingxuan; Zaki, Yosif; Rajan, Kanaka; Shuman, Tristan; Aharoni, Daniel; Cai, Denise J | eLife | 35642786 | 2022 Jun 01 |
| Ion channel mediated mechanotransduction in immune cells. | Hamza, Atcha; Amit, Jairaman; Elizabeth L, Evans; Medha M, Pathak; Michael D, Cahalan; Wendy F, Liu | Current opinion in solid state & materials science | 35645593 | 2021 Dec |
| Intestinal inflammation alters the antigen-specific immune response to a skin commensal. | Merana, Geil R; Dwyer, Laura R; Dhariwala, Miqdad O; Weckel, Antonin; Gonzalez, Jeanmarie R; Okoro, Joy N; Cohen, Jarish N; Tamaki, Courtney M; Han, Jungmin; Tasoff, Preston; Palacios-Calderon, Yasmin; Ha, Connie W Y; Lynch, Susan V; Segre, Julia A; Kong, Heidi H; Kattah, Michael G; Ma, Averil; Scharschmidt, Tiffany C | Cell reports | 35649365 | 2022 May 31 |
| Cholinergic interneurons mediate cocaine extinction in male mice through plasticity across medium spiny neuron subtypes. | Fleming, Weston; Lee, Junuk; Briones, Brandy A; Bolkan, Scott S; Witten, Ilana B | Cell reports | 35649378 | 2022 May 31 |
| A spectrum of recessiveness among Mendelian disease variants in UK Biobank. | Barton, Alison R; Hujoel, Margaux L A; Mukamel, Ronen E; Sherman, Maxwell A; Loh, Po-Ru | American journal of human genetics | 35649421 | 2022 Jul 07 |
| Racial disparities in triple negative breast cancer: toward a causal architecture approach. | Siegel, Scott D; Brooks, Madeline M; Lynch, Shannon M; Sims-Mourtada, Jennifer; Schug, Zachary T; Curriero, Frank C | Breast cancer research : BCR | 35650633 | 2022 06 01 |
| New Views of Old Proteins: Clarifying the Enigmatic Proteome. | Burnum-Johnson, Kristin E; Conrads, Thomas P; Drake, Richard R; Herr, Amy E; Iyengar, Ravi; Kelly, Ryan T; Lundberg, Emma; MacCoss, Michael J; Naba, Alexandra; Nolan, Garry P; Pevzner, Pavel A; Rodland, Karin D; Sechi, Salvatore; Slavov, Nikolai; Spraggins, Jeffrey M; Van Eyk, Jennifer E; Vidal, Marc; Vogel, Christine; Walt, David R; Kelleher, Neil L | Molecular & cellular proteomics : MCP | 35654359 | 2022 Jul |
| Precision Phenotyping of Dilated Cardiomyopathy Using Multidimensional Data. | Tayal, Upasana; Verdonschot, Job A J; Hazebroek, Mark R; Howard, James; Gregson, John; Newsome, Simon; Gulati, Ankur; Pua, Chee Jian; Halliday, Brian P; Lota, Amrit S; Buchan, Rachel J; Whiffin, Nicola; Kanapeckaite, Lina; Baruah, Resham; Jarman, Julian W E; O'Regan, Declan P; Barton, Paul J R; Ware, James S; Pennell, Dudley J; Adriaans, Bouke P; Bekkers, Sebastiaan C A M; Donovan, Jackie; Frenneaux, Michael; Cooper, Leslie T; Januzzi Jr, James L; Cleland, John G F; Cook, Stuart A; Deo, Rahul C; Heymans, Stephane R B; Prasad, Sanjay K | Journal of the American College of Cardiology | 35654493 | 2022 06 07 |
| Universal protein misfolding intermediates can bypass the proteostasis network and remain soluble and less functional. | Nissley, Daniel A; Jiang, Yang; Trovato, Fabio; Sitarik, Ian; Narayan, Karthik B; To, Philip; Xia, Yingzi; Fried, Stephen D; O'Brien, Edward P | Nature communications | 35654797 | 2022 06 02 |
| Logic of the Temporal Compartmentalization of the Hepatic Metabolic Cycle. | Zhu, Bokai | Physiology (Bethesda, Md.) | 35658626 | 2022 Sep 01 |
| Label-free Super-resolution Imaging Enabled by Vibrational Imaging of Swelled Tissue and Analysis. | Miao, Kun; Lin, Li-En; Qian, Chenxi; Wei, Lu | Journal of visualized experiments : JoVE | 35661092 | 2022 05 17 |
| Evaluation of cancer immunotherapy using mini-tumor chips. | Ao, Zheng; Cai, Hongwei; Wu, Zhuhao; Hu, Liya; Li, Xiang; Kaurich, Connor; Gu, Mingxia; Cheng, Liang; Lu, Xin; Guo, Feng | Theranostics | 35664082 | 2022 |
| Transcriptome-wide Cas13 guide RNA design for model organisms and viral RNA pathogens. | Guo, Xinyi; Rahman, Jahan A; Wessels, Hans-Hermann; Méndez-Mancilla, Alejandro; Haro, Daniel; Chen, Xinru; Sanjana, Neville E | Cell genomics | 35664829 | 2021 Oct 13 |
| Monitoring of irrigated lesion formation with single fiber based multispectral system using machine learning. | Park, Soo Young; Singh-Moon, Rajinder P; Yang, Haiqiu; Hendon, Christine P | Journal of biophotonics | 35666015 | 2022 Jun 03 |
| Stem Cell-Based Models for Studying the Effects of Cancer and Cancer Therapies on the Peripheral Nervous System. | Richter, Mikayla N; Fattahi, Faranak | Advanced biology | 35666079 | 2022 Sep |
| Design of RNA-Based Translational Repressors. | Hong, Seongho; Park, Dongwon; Chaudhary, Soma; McCutcheon, Griffin; Green, Alexander A; Kim, Jongmin | Methods in molecular biology (Clifton, N.J.) | 35666438 | 2022 |
| Design of Ribocomputing Devices for Complex Cellular Logic. | McCutcheon, Griffin; Chaudhary, Soma; Hong, Seongho; Park, Dongwon; Kim, Jongmin; Green, Alexander A | Methods in molecular biology (Clifton, N.J.) | 35666439 | 2022 |
| Optimization and Characterization of a Bone Culture Model to Study Prostate Cancer Bone Metastasis. | Wu, Yi-Hsuan; Gugala, Zbigniew; Barry, Megan M; Shen, Yichao; Dasgupta, Subhamoy; Wang, Hai | Molecular cancer therapeutics | 35666809 | 2022 Aug 02 |
| Cell-Free Tumor DNA Dominant Clone Allele Frequency Is Associated With Poor Outcomes in Advanced Biliary Cancers Treated With Platinum-Based Chemotherapy. | Uson Junior, Pedro Luiz Serrano; Majeed, Umair; Yin, Jun; Botrus, Gehan; Sonbol, Mohamad Bassam; Ahn, Daniel H; Starr, Jason S; Jones, Jeremy C; Babiker, Hani; Inabinett, Samantha R; Wylie, Natasha; Boyle, Ashton W R; Bekaii-Saab, Tanios S; Gores, Gregory | JCO precision oncology | 35666960 | 2022 06 |
| Bacillus subtilis biofilm matrix components target seed oil bodies to promote growth and anti-fungal resistance in melon. | Berlanga-Clavero, M V; Molina-Santiago, C; Caraballo-Rodríguez, A M; Petras, D; Díaz-Martínez, L; Pérez-García, A; de Vicente, A; Carrión, V J; Dorrestein, P C; Romero, D | Nature microbiology | 35668112 | 2022 Jul |
| Omicron-specific mRNA vaccination alone and as a heterologous booster against SARS-CoV-2. | Fang, Zhenhao; Peng, Lei; Filler, Renata; Suzuki, Kazushi; McNamara, Andrew; Lin, Qianqian; Renauer, Paul A; Yang, Luojia; Menasche, Bridget; Sanchez, Angie; Ren, Ping; Xiong, Qiancheng; Strine, Madison; Clark, Paul; Lin, Chenxiang; Ko, Albert I; Grubaugh, Nathan D; Wilen, Craig B; Chen, Sidi | Nature communications | 35668119 | 2022 06 06 |
| Functional coupling between TRPV4 channel and TMEM16F modulates human trophoblast fusion. | Zhang, Yang; Liang, Pengfei; Yang, Liheng; Shan, Ke Zoe; Feng, Liping; Chen, Yong; Liedtke, Wolfgang; Coyne, Carolyn B; Yang, Huanghe | eLife | 35670667 | 2022 06 07 |
| Vasculopathy and Increased Vascular Congestion in Fatal COVID-19 and Acute Respiratory Distress Syndrome. | Villalba, Julian A; Hilburn, Caroline F; Garlin, Michelle A; Elliott, Grant A; Li, Yijia; Kunitoki, Keiko; Poli, Sergio; Alba, George A; Madrigal, Emilio; Taso, Manuel; Price, Melissa C; Aviles, Alexis J; Araujo-Medina, Milagros; Bonanno, Liana; Boyraz, Baris; Champion, Samantha N; Harris, Cynthia K; Helland, Timothy L; Hutchison, Bailey; Jobbagy, Soma; Marshall, Michael S; Shepherd, Daniel J; Barth, Jaimie L; Hung, Yin P; Ly, Amy; Hariri, Lida P; Turbett, Sarah E; Pierce, Virginia M; Branda, John A; Rosenberg, Eric S; Mendez-Pena, Javier; Chebib, Ivan; Rosales, Ivy A; Smith, Rex N; Miller, Miles A; Rosas, Ivan O; Hardin, Charles C; Baden, Lindsey R; Medoff, Benjamin D; Colvin, Robert B; Little, Brent P; Stone, James R; Mino-Kenudson, Mari; Shih, Angela R | American journal of respiratory and critical care medicine | 35671465 | 2022 Oct 01 |
| Sociodemographic characteristics and HIV risk behaviors of native-born and displaced Syrian men and transgender women who have sex with men in Lebanon. | Orr, Lilla V; Crawford, Forrest W; Khoshnood, Kaveh; Khouri, Danielle; Fouad, Fouad M; Seal, David W; Heimer, Robert | AIDS and behavior | 35672550 | 2022 Jun 07 |
| Nanoengineered Ink for Designing 3D Printable Flexible Bioelectronics. | Deo, Kaivalya A; Jaiswal, Manish K; Abasi, Sara; Lokhande, Giriraj; Bhunia, Sukanya; Nguyen, Thuy-Uyen; Namkoong, Myeong; Darvesh, Kamran; Guiseppi-Elie, Anthony; Tian, Limei; Gaharwar, Akhilesh K | ACS nano | 35675588 | 2022 Jun 28 |
| Heat Shock Protein 90's Mechanistic Role in Contact Hypersensitivity. | Kim, Seong-Min; Studnitzer, Bradley; Esser-Kahn, Aaron | Journal of immunology (Baltimore, Md. : 1950) | 35675957 | 2022 06 15 |
| Uncertainty in lung cancer stage for survival estimation via set-valued classification. | Bergquist, Savannah; Brooks, Gabriel A; Landrum, Mary Beth; Keating, Nancy L; Rose, Sherri | Statistics in medicine | 35675972 | 2022 Aug 30 |
| Data Source Concordance for Infectious Disease Epidemiology. | Majumder, Maimuna; Cusick, Marika Mae; Rose, Sherri | medRxiv : the preprint server for health sciences | 35677068 | 2022 Jun 03 |
| Potent and pan-neutralization of SARS-CoV-2 variants of concern by DARPins. | Chonira, Vikas; Kwon, Young Do; Gorman, Jason; Case, James Brett; Ku, Zhiqiang; Simeon, Rudo; Casner, Ryan G; Harris, Darcy R; Olia, Adam S; Stephens, Tyler; Shapiro, Lawrence; Boyd, Hannah; Tsybovsky, Yaroslav; Krammer, Florian; Diamond, Michael S; Kwong, Peter D; An, Zhiqiang; Chen, Zhilei | bioRxiv : the preprint server for biology | 35677079 | 2022 May 31 |
| R-SPONDIN2+ mesenchymal cells form the bud tip progenitor niche during human lung development. | Hein, Renee F C; Wu, Joshua H; Holloway, Emily M; Frum, Tristan; Conchola, Ansley S; Tsai, Yu-Hwai; Wu, Angeline; Fine, Alexis S; Miller, Alyssa J; Szenker-Ravi, Emmanuelle; Yan, Kelley S; Kuo, Calvin J; Glass, Ian; Reversade, Bruno; Spence, Jason R | Developmental cell | 35679862 | 2022 Jul 11 |
| Structural Basis for pH-gating of the K+ channel TWIK1 at the selectivity filter. | Turney, Toby S; Li, Vivian; Brohawn, Stephen G | Nature communications | 35680900 | 2022 06 09 |
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| The metabolome of Mexican cavefish shows a convergent signature highlighting sugar, antioxidant, and Ageing-Related metabolites. | Medley, J Kyle; Persons, Jenna; Biswas, Tathagata; Olsen, Luke; Peuß, Robert; Krishnan, Jaya; Xiong, Shaolei; Rohner, Nicolas | eLife | 35703366 | 2022 06 15 |
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| How Microtubules Build the Spindle Branch by Branch. | Travis, Sophie M; Mahon, Brian P; Petry, Sabine | Annual review of cell and developmental biology | 35759800 | 2022 Oct 06 |
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| Tonic activity in lateral habenula neurons acts as a neutral valence brake on reward-seeking behavior. | Post, Ryan J; Bulkin, David A; Ebitz, R Becket; Lee, Vladlena; Han, Kasey; Warden, Melissa R | Current biology : CB | 36049479 | 2022 Oct 24 |
| Optical coherence tomography holds promise to transform the diagnostic anatomic pathology gross evaluation process. | Mojahed, Diana; Applegate, Matthew; Guo, Hua; Taback, Bret; Ha, Richard; Hibshoosh, Hanina; Hendon, Christine | Journal of biomedical optics | 36050827 | 2022 Sep |
| Somatic mutations in single human cardiomyocytes reveal age-associated DNA damage and widespread oxidative genotoxicity. | Choudhury, Sangita; Huang, August Yue; Kim, Junho; Zhou, Zinan; Morillo, Katherine; Maury, Eduardo A; Tsai, Jessica W; Miller, Michael B; Lodato, Michael A; Araten, Sarah; Hilal, Nazia; Lee, Eunjung Alice; Chen, Ming Hui; Walsh, Christopher A | Nature aging | 36051457 | 2022 Aug |
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| Adult fibroblasts use aggresomes only in distinct cell-states. | Morrow, Christopher S; Arndt, Zachary P; Klosa, Payton C; Peng, Bo; Zewdie, Eden Y; Benayoun, Bérénice A; Moore, Darcie L | Scientific reports | 36056070 | 2022 Sep 02 |
| 3D proximal tubule-on-chip model derived from kidney organoids with improved drug uptake. | Aceves, Jeffrey O; Heja, Szilvia; Kobayashi, Kenichi; Robinson, Sanlin S; Miyoshi, Tomoya; Matsumoto, Takuya; Schäffers, Olivier J M; Morizane, Ryuji; Lewis, Jennifer A | Scientific reports | 36056134 | 2022 Sep 02 |
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| Inferring cell communication using single-cell calcium spatiotemporal dynamics. | Taghdiri, Nika; King, Kevin R | STAR protocols | 36065295 | 2022 09 16 |
| Substrate multiplexed protein engineering facilitates promiscuous biocatalytic synthesis. | McDonald, Allwin D; Higgins, Peyton M; Buller, Andrew R | Nature communications | 36068220 | 2022 09 06 |
| Highly efficient generation of isogenic pluripotent stem cell models using prime editing. | Li, Hanqin; Busquets, Oriol; Verma, Yogendra; Syed, Khaja Mohieddin; Kutnowski, Nitzan; Pangilinan, Gabriella R; Gilbert, Luke A; Bateup, Helen S; Rio, Donald C; Hockemeyer, Dirk; Soldner, Frank | eLife | 36069759 | 2022 Sep 07 |
| Decoding the Spermatogenesis Program: New Insights from Transcriptomic Analyses. | Rabbani, Mashiat; Zheng, Xianing; Manske, Gabe L; Vargo, Alexander; Shami, Adrienne N; Li, Jun Z; Hammoud, Saher Sue | Annual review of genetics | 36070560 | 2022 Nov 30 |
| The spatial scale of somatostatin subnetworks increases from sensory to association cortex. | Khoury, Christine F; Fala, Noelle G; Runyan, Caroline A | Cell reports | 36070697 | 2022 Sep 06 |
| Microbial biofilms as living photoconductors due to ultrafast electron transfer in cytochrome OmcS nanowires. | Neu, Jens; Shipps, Catharine C; Guberman-Pfeffer, Matthew J; Shen, Cong; Srikanth, Vishok; Spies, Jacob A; Kirchhofer, Nathan D; Yalcin, Sibel Ebru; Brudvig, Gary W; Batista, Victor S; Malvankar, Nikhil S | Nature communications | 36071037 | 2022 09 07 |
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| A Subset of Secreted Proteins in Ascites Can Predict Platinum-Free Interval in Ovarian Cancer. | Carroll, Molly J; Kaipio, Katja; Hynninen, Johanna; Carpen, Olli; Hautaniemi, Sampsa; Page, David; Kreeger, Pamela K | Cancers | 36077825 | 2022 Sep 01 |
| The role of cell-envelope synthesis for envelope growth and cytoplasmic density in Bacillus subtilis. | Kitahara, Yuki; Oldewurtel, Enno R; Wilson, Sean; Sun, Yingjie; Altabe, Silvia; de Mendoza, Diego; Garner, Ethan C; van Teeffelen, Sven | PNAS nexus | 36082236 | 2022 Sep |
| High-performance multiplex drug-gated CAR circuits. | Li, Hui-Shan; Wong, Nicole M; Tague, Elliot; Ngo, John T; Khalil, Ahmad S; Wong, Wilson W | Cancer cell | 36084652 | 2022 Nov 14 |
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| Multi-curve fitting and tubulin-lattice signal removal for structure determination of large microtubule-based motors. | Chai, Pengxin; Rao, Qinhui; Zhang, Kai | Journal of structural biology | 36089228 | 2022 Dec |
| Rejoinder: Optimal individualized decision rules using instrumental variable methods. | Qiu, Hongxiang; Carone, Marco; Sadikova, Ekaterina; Petukhova, Maria; Kessler, Ronald C; Luedtke, Alex | Journal of the American Statistical Association | 36092993 | 2021 |
| Accurate Classification of Cardiomyopathy Diagnosis by Chromatin Accessibility. | Bhattacharyya, Samadrita; Duan, Jialei; Vela, Ryan J; Bhakta, Minoti; Bajona, Pietro; Mammen, Pradeep P A; Hon, Gary C; Munshi, Nikhil V | Circulation | 36095061 | 2022 Sep 13 |
| Clonal hematopoiesis of indeterminate potential, DNA methylation, and risk for coronary artery disease. | Uddin, M D Mesbah; Nguyen, Ngoc Quynh H; Yu, Bing; Brody, Jennifer A; Pampana, Akhil; Nakao, Tetsushi; Fornage, Myriam; Bressler, Jan; Sotoodehnia, Nona; Weinstock, Joshua S; Honigberg, Michael C; Nachun, Daniel; Bhattacharya, Romit; Griffin, Gabriel K; Chander, Varuna; Gibbs, Richard A; Rotter, Jerome I; Liu, Chunyu; Baccarelli, Andrea A; Chasman, Daniel I; Whitsel, Eric A; Kiel, Douglas P; Murabito, Joanne M; Boerwinkle, Eric; Ebert, Benjamin L; Jaiswal, Siddhartha; Floyd, James S; Bick, Alexander G; Ballantyne, Christie M; Psaty, Bruce M; Natarajan, Pradeep; Conneely, Karen N | Nature communications | 36097025 | 2022 09 12 |
| Error-prone repair of stalled replication forks drives mutagenesis and loss of heterozygosity in haploinsufficient BRCA1 cells. | Deshpande, Madhura; Paniza, Theodore; Jalloul, Nahed; Nanjangud, Gouri; Twarowski, Jerzy; Koren, Amnon; Zaninovic, Nikica; Zhan, Qiansheng; Chadalavada, Kalyani; Malkova, Anna; Khiabanian, Hossein; Madireddy, Advaitha; Rosenwaks, Zev; Gerhardt, Jeannine | Molecular cell | 36099913 | 2022 Oct 20 |
| Conventional and Investigational Approaches Leveraging Clinical EEG for Prognosis in Acute Disorders of Consciousness. | Curley, William H; Comanducci, Angela; Fecchio, Matteo | Seminars in neurology | 36100227 | 2022 06 |
| Pharmacologic Therapies to Promote Recovery of Consciousness. | Barra, Megan E; Edlow, Brian L; Brophy, Gretchen M | Seminars in neurology | 36100228 | 2022 06 |
| Identification of a transcriptional signature found in multiple models of ASD and related disorders. | Thudium, Samuel; Palozola, Katherine; L'Her, Éloïse; Korb, Erica | Genome research | 36104286 | 2022 Sep 14 |
| Epithelial immunomodulation by aerosolized Toll-like receptor agonists prevents allergic inflammation in airway mucosa in mice. | Goldblatt, David L; Valverde Ha, Gabriella; Wali, Shradha; Kulkarni, Vikram V; Longmire, Michael K; Jaramillo, Ana M; Chittuluru, Rosha P; Fouts, Adrienne; Martinez-Moczygemba, Margarita; Lei, Jonathan T; Huston, David P; Tuvim, Michael J; Dickey, Burton | Frontiers in pharmacology | 36105216 | 2022 |
| Bioactive Fibronectin-III10-DNA Origami Nanofibers Promote Cell Adhesion and Spreading. | Buchberger, Alex; Riker, Kyle; Bernal-Chanchavac, Julio; Narayanan, Raghu Pradeep; Simmons, Chad R; Fahmi, Nour Eddine; Freeman, Ronit; Stephanopoulos, Nicholas | ACS applied bio materials | 36108278 | 2022 Sep 15 |
| Temporal gene expression patterns in the coral Euphyllia paradivisa reveal the complexity of biological clocks in the cnidarian-algal symbiosis. | Rinsky, Mieka; Weizman, Eviatar; Ben-Asher, Hiba Waldman; Eyal, Gal; Zhu, Bokai; Levy, Oren | Science advances | 36112690 | 2022 Sep 16 |
| Leveraging Nanomechanical Perturbations in Raman Spectro-Immunoassays to Design a Versatile Serum Biomarker Detection Platform. | Zheng, Peng; Raj, Piyush; Wu, Lintong; Szabo, Miklos; Hanson, William A; Mizutani, Takayuki; Barman, Ishan | Small (Weinheim an der Bergstrasse, Germany) | 36117050 | 2022 Sep 18 |
| Developing skin cancer education materials for darker skin populations: crowdsourced design, message targeting, and acral lentiginous melanoma. | Upshaw, Sean J; Jensen, Jakob D; Giorgi, Elizabeth A; Pokharel, Manusheela; Lillie, Helen M; Adams, Dallin R; John, Kevin K; Wu, Yelena P; Grossman, Douglas | Journal of behavioral medicine | 36125669 | 2022 Sep 20 |
| A mitofusin 2/HIF1α axis sets a maturation checkpoint in regenerating skeletal muscle. | Wang, Xun; Jia, Yuemeng; Zhao, Jiawei; Lesner, Nicholas P; Menezes, Cameron J; Shelton, Spencer D; Venigalla, Siva Sai Krishna; Xu, Jian; Cai, Chunyu; Mishra, Prashant | The Journal of clinical investigation | 36125902 | 2022 Dec 01 |
| Randomization for the susceptibility effect of an infectious disease intervention. | Eck, Daniel J; Morozova, Olga; Crawford, Forrest W | Journal of mathematical biology | 36127558 | 2022 Sep 20 |
| Microbiome complexity shapes metabolism. | Litichevskiy, Lev; Thaiss, Christoph A | PLoS biology | 36129892 | 2022 09 |
| Organoid-on-a-chip model of human ARPKD reveals mechanosensing pathomechanisms for drug discovery. | Hiratsuka, Ken; Miyoshi, Tomoya; Kroll, Katharina T; Gupta, Navin R; Valerius, M Todd; Ferrante, Thomas; Yamashita, Michifumi; Lewis, Jennifer A; Morizane, Ryuji | Science advances | 36129975 | 2022 09 23 |
| Genomic profiling for clinical decision making in myeloid neoplasms and acute leukemia. | Duncavage, Eric J; Bagg, Adam; Hasserjian, Robert P; DiNardo, Courtney D; Godley, Lucy A; Iacobucci, Ilaria; Jaiswal, Siddhartha; Malcovati, Luca; Vannucchi, Alessandro M; Patel, Keyur P; Arber, Daniel A; Arcila, Maria E; Bejar, Rafael; Berliner, Nancy; Borowitz, Michael J; Branford, Susan; Brown, Anna L; Cargo, Catherine A; Döhner, Hartmut; Falini, Brunangelo; Garcia-Manero, Guillermo; Haferlach, Torsten; Hellström-Lindberg, Eva; Kim, Annette S; Klco, Jeffery M; Komrokji, Rami; Lee-Cheun Loh, Mignon; Loghavi, Sanam; Mullighan, Charles G; Ogawa, Seishi; Orazi, Attilio; Papaemmanuil, Elli; Reiter, Andreas; Ross, David M; Savona, Michael; Shimamura, Akiko; Skoda, Radek C; Solé, Francesc; Stone, Richard M; Tefferi, Ayalew; Walter, Matthew J; Wu, David; Ebert, Benjamin L; Cazzola, Mario | Blood | 36130297 | 2022 Nov 24 |
| Thymidine rescues ATR kinase inhibitor-induced deoxyuridine contamination in genomic DNA, cell death, and interferon-α/β expression. | Sugitani, Norie; Vendetti, Frank P; Cipriano, Andrew J; Pandya, Pinakin; Deppas, Joshua J; Moiseeva, Tatiana N; Schamus-Haynes, Sandra; Wang, Yiyang; Palmer, Drake; Osmanbeyoglu, Hatice U; Bostwick, Anna; Snyder, Nathaniel W; Gong, Yi-Nan; Aird, Katherine | Cell reports | 36130512 | 2022 Sep 20 |
| CLN3 is required for the clearance of glycerophosphodiesters from lysosomes. | Laqtom, Nouf N; Dong, Wentao; Medoh, Uche N; Cangelosi, Andrew L; Dharamdasani, Vimisha; Chan, Sze Ham; Kunchok, Tenzin; Lewis, Caroline A; Heinze, Ivonne; Tang, Rachel; Grimm, Christian; Dang Do, An N; Porter, Forbes D; Ori, Alessandro; Sabatini, David M; Abu-Remaileh, Monther | Nature | 36131016 | 2022 Sep |
| Engineering Enzyme Substrate Scope Complementarity for Promiscuous Cascade Synthesis of 1,2-Amino Alcohols. | McDonald, Allwin D; Bruffy, Samantha K; Kasat, Aadhishre T; Buller, Andrew Richard | Angewandte Chemie (International ed. in English) | 36136093 | 2022 Sep 22 |
| Single-cell multi-omics of human clonal hematopoiesis reveals that DNMT3A R882 mutations perturb early progenitor states through selective hypomethylation. | Nam, Anna S; Dusaj, Neville; Izzo, Franco; Murali, Rekha; Myers, Robert M; Mouhieddine, Tarek H; Sotelo, Jesus; Benbarche, Salima; Waarts, Michael; Gaiti, Federico; Tahri, Sabrin; Levine, Ross; Abdel-Wahab, Omar; Godley, Lucy A; Chaligne, Ronan; Ghobrial, Irene; Landau, Dan A | Nature genetics | 36138229 | 2022 Oct |
| A kinetic-optimized CoChR variant with enhanced high-frequency spiking fidelity. | Bi, Xiaoke; Beck, Connor; Gong, Yiyang | Biophysical journal | 36151721 | 2022 11 01 |
| Energetics, kinetics, and pathways of SNARE assembly in membrane fusion. | Zhang, Yongli; Ma, Lu; Bao, Huan | Critical reviews in biochemistry and molecular biology | 36151854 | 2022 Aug |
| Differential requirements for mitochondrial electron transport chain components in the adult murine liver. | Lesner, Nicholas P; Wang, Xun; Chen, Zhenkang; Frank, Anderson; Menezes, Cameron J; House, Sara; Shelton, Spencer D; Lemoff, Andrew; McFadden, David G; Wansapura, Janaka; DeBerardinis, Ralph J; Mishra, Prashant | eLife | 36154948 | 2022 Sep 26 |
| The material properties of a bacterial-derived biomolecular condensate tune biological function in natural and synthetic systems. | Lasker, Keren; Boeynaems, Steven; Lam, Vinson; Scholl, Daniel; Stainton, Emma; Briner, Adam; Jacquemyn, Maarten; Daelemans, Dirk; Deniz, Ashok; Villa, Elizabeth; Holehouse, Alex S; Gitler, Aaron D; Shapiro, Lucy | Nature communications | 36163138 | 2022 Sep 26 |
| Single-cell genome sequencing of human neurons identifies somatic point mutation and indel enrichment in regulatory elements. | Luquette, Lovelace J; Miller, Michael B; Zhou, Zinan; Bohrson, Craig L; Zhao, Yifan; Jin, Hu; Gulhan, Doga; Ganz, Javier; Bizzotto, Sara; Kirkham, Samantha; Hochepied, Tino; Libert, Claude; Galor, Alon; Kim, Junho; Lodato, Michael A; Garaycoechea, Juan I; Gawad, Charles; West, Jay; Walsh, Christopher A; Park, Peter J | Nature genetics | 36163278 | 2022 Oct |
| Haplotype-aware analysis of somatic copy number variations from single-cell transcriptomes. | Gao, Teng; Soldatov, Ruslan; Sarkar, Hirak; Kurkiewicz, Adam; Biederstedt, Evan; Loh, Po-Ru; Kharchenko, Peter V | Nature biotechnology | 36163550 | 2023 Mar |
| Minimizing Molecular Misidentification in Imaging Low-Abundance Protein Interactions Using Spectroscopic Single-Molecule Localization Microscopy. | Zhang, Yang; Wang, Gaoxiang; Huang, Peizhou; Sun, Edison; Kweon, Junghun; Li, Qianru; Zhe, Ji; Ying, Leslie L; Zhang, Hao F | Analytical chemistry | 36165784 | 2022 Oct 11 |
| Obesity is associated with altered tumor metabolism in metastatic melanoma. | Hahn, Andrew W; Menk, Ashley V; Rivadeneira, Dayana B; Augustin, Ryan C; Xu, Mingchu; Li, Jun; Wu, Xiaogang; Mishra, Aditya K; Gide, Tuba N; Quek, Camelia; Zang, Yan; Spencer, Christine N; Menzies, Alexander M; Daniel, Carrie R; Hudgens, Courtney W; Nowic | Clinical cancer research : an official journal of the American Association for Cancer Research | 36166093 | 2022 Sep 27 |
| Comorbidity-driven multi-modal subtype analysis in mild cognitive impairment of Alzheimer's disease. | Katabathula, Sreevani; Davis, Pamela B; Xu, Rong | Alzheimer's & dementia : the journal of the Alzheimer's Association | 36166485 | 2023 Apr |
| Advancements in G protein-coupled receptor biosensors to study GPCR-G protein coupling. | Olsen, Reid H J; English, Justin G | British journal of pharmacology | 36166832 | 2023 Jun |
| A Single Nucleotide Polymorphism in SH2B3/LNK Promotes Hypertension Development and Renal Damage. | Alexander, Matthew R; Hank, Samuel; Dale, Bethany L; Himmel, Lauren; Zhong, Xue; Smart, Charles D; Fehrenbach, Daniel J; Chen, Yuhan; Prabakaran, Nitin; Tirado, Brian; Centrella, Megan; Ao, Mingfang; Du, Liping; Shyr, Yu; Levy, Daniel; Madhur, Meena S | Circulation research | 36169218 | 2022 Oct 14 |
| Correcting motion induced fluorescence artifacts in two-channel neural imaging. | Creamer, Matthew S; Chen, Kevin S; Leifer, Andrew M; Pillow, Jonathan W | PLoS computational biology | 36170268 | 2022 09 |
| Constructing 2D maps of human spinal cord activity and isolating the functional midline with high-density microelectrode arrays. | Russman, Samantha M; Cleary, Daniel R; Tchoe, Youngbin; Bourhis, Andrew M; Stedelin, Brittany; Martin, Joel; Brown, Erik C; Zhang, Xinlian; Kawamoto, Aaron; Ryu, Won Hyung A; Raslan, Ahmed M; Ciacci, Joseph D; Dayeh, Shadi A | Science translational medicine | 36170445 | 2022 Sep 28 |
| De novo sphingolipid biosynthesis necessitates detoxification in cancer cells. | Spears, Meghan E; Lee, Namgyu; Hwang, Sunyoung; Park, Sung Jin; Carlisle, Anne E; Li, Rui; Doshi, Mihir B; Armando, Aaron M; Gao, Jenny; Simin, Karl; Zhu, Lihua Julie; Greer, Paul L; Quehenberger, Oswald; Torres, Eduardo M; Kim, Dohoon | Cell reports | 36170811 | 2022 Sep 27 |
| Motor cortical influence relies on task-specific activity covariation. | Warriner, Claire L; Fageiry, Samaher; Saxena, Shreya; Costa, Rui M; Miri, Andrew | Cell reports | 36170841 | 2022 Sep 27 |
| Bronchus-associated macrophages efficiently capture and present soluble inhaled antigens and are capable of local Th2 cell activation. | Tang, Xin-Zi; Kreuk, Lieselotte S M; Cho, Cynthia; Metzger, Ross J; Allen, Christopher D C | eLife | 36173678 | 2022 Sep 29 |
| Improved mammalian retromer cryo-EM structures reveal a new assembly interface. | Kendall, Amy K; Chandra, Mintu; Xie, Boyang; Wan, William; Jackson, Lauren P | The Journal of biological chemistry | 36174678 | 2022 Sep 26 |
| Bioorthogonal Click and Release: A General, Rapid, Chemically Revertible Bioconjugation Strategy Employing Enamine N-oxides. | Kang, Dahye; Lee, Sanghyeon; Kim, Justin | Chem | 36176744 | 2022 Aug 11 |
| Engineering multicellular living systems-A Keystone Symposia report. | Cable, Jennifer; Arlotta, Paola; Parker, Kevin Kit; Hughes, Alex J; Goodwin, Katharine; Mummery, Christine L; Kamm, Roger D; Engle, Sandra J; Tagle, Danilo A; Boj, Sylvia F; Stanton, Alice E; Morishita, Yoshihiro; Kemp, Melissa L; Norfleet, Dennis A; May, | Annals of the New York Academy of Sciences | 36177947 | 2022 Sep 30 |
| Programming the Self-Organization of Endothelial Cells into Perfusable Microvasculature. | Cabral, Katelyn A; Srivastava, Vasudha; Graham, Austin J; Coyle, Maxwell C; Stashko, Connor; Weaver, Valerie; Gartner, Zev J | Tissue engineering. Part A | 36181350 | 2023 Feb |
| CyTOF analysis identifies unusual immune cells in urine of BCG-treated bladder cancer patients. | Castellano, Eva; Samba, Célia; Esteso, Gloria; Simpson, Laura; Vendrame, Elena; García-Cuesta, Eva M; López-Cobo, Sheila; Álvarez-Maestro, Mario; Linares, Ana; Leibar, Asier; Ranganath, Thanmayi; Reyburn, Hugh T; Martínez-Piñeiro, Luis; Blish, Catherine; | Frontiers in immunology | 36189320 | 2022 |
| A (Controlled) Spill of IL2 for Localized Treatment of Mesothelioma. | Palanki, Rohan; Swingle, Kelsey L; Mitchell, Michael J | Clinical cancer research : an official journal of the American Association for Cancer Research | 36190329 | 2022 Dec 01 |
| Dissecting the stability determinants of a challenging de novo protein fold using massively parallel design and experimentation. | Kim, Tae-Eun; Tsuboyama, Kotaro; Houliston, Scott; Martell, Cydney M; Phoumyvong, Claire M; Lemak, Alexander; Haddox, Hugh K; Arrowsmith, Cheryl H; Rocklin, Gabriel J | Proceedings of the National Academy of Sciences of the United States of America | 36191185 | 2022 Oct 11 |
| Balancing Trade-Offs Imposed by Growth Media and Mass Spectrometry for Bacterial Exometabolomics. | Donnelly, Ann E; Narayanan, Nithya; Birer-Williams, Caroline M C; DeWolfe, Travis J; Chu, Rosalie K; Anderton, Christopher R; Wright, Erik S | Applied and environmental microbiology | 36197102 | 2022 Oct 26 |
| E-Cannula reveals anatomical diversity in sharp-wave ripples as a driver for the recruitment of distinct hippocampal assemblies. | Liu, Xin; Terada, Satoshi; Ramezani, Mehrdad; Kim, Jeong-Hoon; Lu, Yichen; Grosmark, Andres; Losonczy, Attila; Kuzum, Duygu | Cell reports | 36198271 | 2022 10 04 |
| SARS-CoV-2 disrupts host epigenetic regulation via histone mimicry. | Kee, John; Thudium, Samuel; Renner, David M; Glastad, Karl; Palozola, Katherine; Zhang, Zhen; Li, Yize; Lan, Yemin; Cesare, Joseph; Poleshko, Andrey; Kiseleva, Anna A; Truitt, Rachel; Cardenas-Diaz, Fabian L; Zhang, Xianwen; Xie, Xuping; Kotton, Darrell N | Nature | 36198800 | 2022 10 |
| A noncoding single-nucleotide polymorphism at 8q24 drives IDH1-mutant glioma formation. | Yanchus, Connor; Drucker, Kristen L; Kollmeyer, Thomas M; Tsai, Ricky; Winick-Ng, Warren; Liang, Minggao; Malik, Ahmad; Pawling, Judy; De Lorenzo, Silvana B; Ali, Asma; Decker, Paul A; Kosel, Matt L; Panda, Arijit; Al-Zahrani, Khalid N; Jiang, Lingyan; Browning, Jared W L; Lowden, Chris; Geuenich, Michael; Hernandez, J Javier; Gosio, Jessica T; Ahmed, Musaddeque; Loganathan, Sampath Kumar; Berman, Jacob; Trcka, Daniel; Michealraj, Kulandaimanuvel Antony; Fortin, Jerome; Carson, Brittany; Hollingsworth, Ethan W; Jacinto, Sandra; Mazrooei, Parisa; Zhou, Lily; Elia, Andrew; Lupien, Mathieu; He, Housheng Hansen; Murphy, Daniel J; Wang, Liguo; Abyzov, Alexej; Dennis, James W; Maass, Philipp G; Campbell, Kieran; Wilson, Michael D; Lachance, Daniel H; Wrensch, Margaret; Wiencke, John; Mak, Tak; Pennacchio, Len A; Dickel, Diane E; Visel, Axel; Wrana, Jeffrey; Taylor, Michael D; Zadeh, Gelareh; Dirks, Peter; Eckel-Passow, Jeanette E; Attisano, Liliana; Pombo, Ana; Ida, Cristiane M; Kvon, Evgeny Z; Jenkins, Robert B; Schramek, Daniel | Science (New York, N.Y.) | 36201590 | 2022 Oct 07 |
| High-throughput identification of prefusion-stabilizing mutations in SARS-CoV-2 spike. | Tan, Timothy J C; Mou, Zongjun; Lei, Ruipeng; Ouyang, Wenhao O; Yuan, Meng; Song, Ge; Andrabi, Raiees; Wilson, Ian A; Kieffer, Collin; Dai, Xinghong; Matreyek, Kenneth A; Wu, Nicholas C | bioRxiv : the preprint server for biology | 36203547 | 2022 Sep 26 |
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| Identifying the Transcriptional Drivers of Metastasis Embedded within Localized Melanoma. | Suresh, Shruthy; Rabbie, Roy; Garg, Manik; Lumaquin, Dianne; Huang, Ting-Hsiang; Montal, Emily; Ma, Yilun; Cruz, Nelly M; Tang, Xinran; Nsengimana, Jérémie; Newton-Bishop, Julia; Hunter, Miranda V; Zhu, Yuxin; Chen, Kevin; de Stanchina, Elisa; Adams, David J; White, Richard M | Cancer discovery | 36259947 | 2023 Jan 09 |
| Intrinsic Molecular Subtypes of Metastatic Castration-Resistant Prostate Cancer. | Feng, Eric; Rydzewski, Nicholas R; Zhang, Meng; Lundberg, Arian; Bootsma, Matthew; Helzer, Kyle T; Lang, Joshua M; Aggarwal, Rahul; Small, Eric J; Quigley, David A; Sjöström, Martin; Zhao, Shuang G | Clinical cancer research : an official journal of the American Association for Cancer Research | 36260524 | 2022 Dec 15 |
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| The derivative of tissue activation as a marker of arrhythmogenic myocardium. | Temma, Taro; Lux, Robert L; Yoshie, Koji; Hayase, Justin; Bradfield, Jason S; Shivkumar, Kalyanam; Ajijola, Olujimi A | Heart rhythm | 36270579 | 2023 Feb |
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| Cryo-electron tomography with mixed-scale dense neural networks reveals key steps in deployment of Toxoplasma invasion machinery. | Segev-Zarko, Li-Av; Dahlberg, Peter D; Sun, Stella Y; Pelt, Daniël M; Kim, Chi Yong; Egan, Elizabeth S; Sethian, James A; Chiu, Wah; Boothroyd, John C | PNAS nexus | 36329726 | 2022 Sep |
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| Sensory nerves enhance triple-negative breast cancer invasion and metastasis via the axon guidance molecule PlexinB3. | Le, Thanh T; Payne, Samantha L; Buckwald, Maia N; Hayes, Lily A; Parker, Savannah R; Burge, Christopher B; Oudin, Madeleine J | NPJ breast cancer | 36333352 | 2022 Nov 04 |
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| Rationally Designed Minimal Bioactive Domains of AS-48 Bacteriocin Homologs Possess Potent Antileishmanial Properties. | Corman, Hannah N; Ross, Jessica N; Fields, Francisco R; Shoue, Douglas A; McDowell, Mary Ann; Lee, Shaun W | Microbiology spectrum | 36342284 | 2022 Dec 21 |
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| Testing the feasibility, acceptability, and preliminary effect of a novel deliberate practice intervention to reduce diagnostic error in trauma triage: a study protocol for a randomized pilot trial. | Mohan, Deepika; Elmer, Jonathan; Arnold, Robert M; Forsythe, Raquel M; Fischhoff, Baruch; Rak, Kimberly; Barnes, Jacqueline L; White, Douglas B | Pilot and feasibility studies | 36510328 | 2022 Dec 12 |
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| Towards aSmart Bionic Eye: AI-powered artificial vision for the treatment of incurable blindness. | Beyeler, Michael; Sanchez-Garcia, Melani | Journal of neural engineering | 36541463 | 2022 Dec 07 |
| CRISPR-Suppressor Scanning for Systematic Discovery of Drug-Resistance Mutations. | Ngan, Kevin C; Lue, Nicholas Z; Lee, Ceejay; Liau, Brian B | Current protocols | 36541895 | 2022 Dec |
| Hypoxia drives CD39-dependent suppressor function in exhausted T cells to limit antitumor immunity. | Vignali, Paolo D A; DePeaux, Kristin; Watson, McLane J; Ye, Chenxian; Ford, B Rhodes; Lontos, Konstantinos; McGaa, Nicole K; Scharping, Nicole E; Menk, Ashley V; Robson, Simon C; Poholek, Amanda C; Rivadeneira, Dayana B; Delgoffe, Greg M | Nature immunology | 36543958 | 2023 Feb |
| R-loop-derived cytoplasmic RNA-DNA hybrids activate an immune response. | Crossley, Magdalena P; Song, Chenlin; Bocek, Michael J; Choi, Jun-Hyuk; Kousorous, Joseph; Sathirachinda, Ataya; Lin, Cindy; Brickner, Joshua R; Bai, Gongshi; Lans, Hannes; Vermeulen, Wim; Abu-Remaileh, Monther; Cimprich, Karlene A | Nature | 36544021 | 2023 Jan |
| Syntaphilin Regulates Neutrophil Migration in Cancer. | Fu, Shuyu; Deng, Hui; Bertolini, Irene; Perego, Michela; Chen, Eric S; Sanseviero, Emilio; Mostafa, Ali; Alicea-Torres, Kevin; Garcia-Gerique, Laura; Stone, Erica L; Kossenkov, Andrew V; Schug, Zachary T; Nam, Brian; Mulligan, Charles; Altieri, Dario C; Nefedova, Yulia; Gabrilovich, Dmitry I | Cancer immunology research | 36548516 | 2023 Mar 01 |
| The sound of silence: Transgene silencing in mammalian cell engineering. | Cabrera, Alan; Edelstein, Hailey I; Glykofrydis, Fokion; Love, Kasey S; Palacios, Sebastian; Tycko, Josh; Zhang, Meng; Lensch, Sarah; Shields, Cara E; Livingston, Mark; Weiss, Ron; Zhao, Huimin; Haynes, Karmella A; Morsut, Leonardo; Chen, Yvonne Y; Khalil, Ahmad S; Wong, Wilson W; Collins, James J; Rosser, Susan J; Polizzi, Karen; Elowitz, Michael B; Fussenegger, Martin; Hilton, Isaac B; Leonard, Joshua N; Bintu, Lacramioara; Galloway, Kate E; Deans, Tara L | Cell systems | 36549273 | 2022 Dec 21 |
| Efficient combinatorial targeting of RNA transcripts in single cells with Cas13 RNA Perturb-seq. | Wessels, Hans-Hermann; Méndez-Mancilla, Alejandro; Hao, Yuhan; Papalexi, Efthymia; Mauck 3rd, William M; Lu, Lu; Morris, John A; Mimitou, Eleni P; Smibert, Peter; Sanjana, Neville E; Satija, Rahul | Nature methods | 36550277 | 2023 Jan |
| Ictal fMRI: Mapping Seizure Topography with Rhythmic BOLD Oscillations. | Fischer, David; Rapalino, Otto; Fecchio, Matteo; Edlow, Brian L | Brain sciences | 36552169 | 2022 Dec 13 |
| Integrative single-cell analysis of cardiogenesis identifies developmental trajectories and non-coding mutations in congenital heart disease. | Ameen, Mohamed; Sundaram, Laksshman; Shen, Mengcheng; Banerjee, Abhimanyu; Kundu, Soumya; Nair, Surag; Shcherbina, Anna; Gu, Mingxia; Wilson, Kitchener D; Varadarajan, Avyay; Vadgama, Nirmal; Balsubramani, Akshay; Wu, Joseph C; Engreitz, Jesse M; Farh, Kyle; Karakikes, Ioannis; Wang, Kevin C; Quertermous, Thomas; Greenleaf, William J; Kundaje, Anshul | Cell | 36563664 | 2022 Dec 22 |
| Multimodal monitoring of human cortical organoids implanted in mice reveal functional connection with visual cortex. | Wilson, Madison N; Thunemann, Martin; Liu, Xin; Lu, Yichen; Puppo, Francesca; Adams, Jason W; Kim, Jeong-Hoon; Ramezani, Mehrdad; Pizzo, Donald P; Djurovic, Srdjan; Andreassen, Ole A; Mansour, Abed AlFatah; Gage, Fred H; Muotri, Alysson R; Devor, Anna; Kuzum, Duygu | Nature communications | 36572698 | 2022 Dec 26 |
| Lipid kinase PIK3C3 maintains healthy brown and white adipose tissues to prevent metabolic diseases. | Song, Wenqiang; Postoak, J Luke; Yang, Guan; Guo, Xingyi; Pua, Heather H; Bader, Jackie; Rathmell, Jeffrey C; Kobayashi, Hanako; Haase, Volker H; Leaptrot, Katrina L; Schrimpe-Rutledge, Alexandra C; Sherrod, Stacy D; McLean, John A; Zhang, Jianhua; Wu, Lan; Van Kaer, Luc | Proceedings of the National Academy of Sciences of the United States of America | 36574710 | 2023 Jan 03 |
| Single-cell transcriptomic analysis identifies murine heart molecular features at embryonic and neonatal stages. | Feng, Wei; Bais, Abha; He, Haoting; Rios, Cassandra; Jiang, Shan; Xu, Juan; Chang, Cindy; Kostka, Dennis; Li, Guang | Nature communications | 36575170 | 2022 Dec 27 |
| Maximizing CRISPRi efficacy and accessibility with dual-sgRNA libraries and optimal effectors. | Replogle, Joseph M; Bonnar, Jessica L; Pogson, Angela N; Liem, Christina R; Maier, Nolan K; Ding, Yufang; Russell, Baylee J; Wang, Xingren; Leng, Kun; Guna, Alina; Norman, Thomas M; Pak, Ryan A; Ramos, Daniel M; Ward, Michael E; Gilbert, Luke A; Kampmann, Martin; Weissman, Jonathan S; Jost, Marco | eLife | 36576240 | 2022 Dec 28 |
| Evolutionarily conserved concepts in glial cell biology. | Smith, Cody J | Current opinion in neurobiology | 36577179 | 2023 Feb |
| Brain capillary pericytes are metabolic sentinels that control blood flow through a KATP channel-dependent energy switch. | Hariharan, Ashwini; Robertson, Colin D; Garcia, Daniela C G; Longden, Thomas A | Cell reports | 36577387 | 2022 Dec 27 |
| Dysregulation of TSP2-Rac1-WAVE2 axis in diabetic cells leads to cytoskeletal disorganization, increased cell stiffness, and dysfunction. | Xing, Hao; Huang, Yaqing; Kunkemoeller, Britta H; Dahl, Peter J; Muraleetharan, Ohvia; Malvankar, Nikhil S; Murrell, Michael P; Kyriakides, Themis R | Scientific reports | 36577792 | 2022 Dec 28 |
| Metabolic adaptation supports enhanced macrophage efferocytosis in limited-oxygen environments. | Wang, Ya-Ting; Trzeciak, Alissa J; Rojas, Waleska Saitz; Saavedra, Pedro; Chen, Yan-Ting; Chirayil, Rachel; Etchegaray, Jon Iker; Lucas, Christopher D; Puleston, Daniel J; Keshari, Kayvan R; Perry, Justin S A | Cell metabolism | 36584675 | 2023 Feb 07 |
| Brainstem serotonin neurons selectively gate retinal information flow to thalamus. | Reggiani, Jasmine D S; Jiang, Qiufen; Barbini, Melanie; Lutas, Andrew; Liang, Liang; Fernando, Jesseba; Deng, Fei; Wan, Jinxia; Li, Yulong; Chen, Chinfei; Andermann, Mark L | Neuron | 36584680 | 2023 Mar 01 |
| Higher-order interactions shape microbial interactions as microbial community complexity increases. | Morin, Manon A; Morrison, Anneliese J; Harms, Michael J; Dutton, Rachel J | Scientific reports | 36587027 | 2022 Dec 31 |
| Carnitine octanoyltransferase is important for the assimilation of exogenous acetyl-L-carnitine into acetyl-CoA in mammalian cells. | Hsu, Jake; Fatuzzo, Nina; Weng, Nielson; Michno, Wojciech; Dong, Wentao; Kienle, Maryline; Dai, Yuqin; Pasca, Anca; Abu-Remaileh, Monther; Rasgon, Natalie; Bigio, Benedetta; Nasca, Carla; Khosla, Chaitan | The Journal of biological chemistry | 36587768 | 2023 Feb |
| Nanopore sequencing of clonal IGH rearrangements in cell-free DNA as a biomarker for acute lymphoblastic leukemia. | Sampathi, Shilpa; Chernyavskaya, Yelena; Haney, Meghan G; Moore, L Henry; Snyder, Isabel A; Cox, Anna H; Fuller, Brittany L; Taylor, Tamara J; Yan, Donglin; Badgett, Tom C; Blackburn, Jessica S | Frontiers in oncology | 36591474 | 2022 |
| Integration of whole transcriptome spatial profiling with protein markers. | Ben-Chetrit, Nir; Niu, Xiang; Swett, Ariel D; Sotelo, Jesus; Jiao, Maria S; Stewart, Caitlin M; Potenski, Catherine; Mielinis, Paulius; Roelli, Patrick; Stoeckius, Marlon; Landau, Dan A | Nature biotechnology | 36593397 | 2023 Jun |
| Magnify is a universal molecular anchoring strategy for expansion microscopy. | Klimas, Aleksandra; Gallagher, Brendan R; Wijesekara, Piyumi; Fekir, Sinda; DiBernardo, Emma F; Cheng, Zhangyu; Stolz, Donna B; Cambi, Franca; Watkins, Simon C; Brody, Steven L; Horani, Amjad; Barth, Alison L; Moore, Christopher I; Ren, Xi; Zhao, Yongxin | Nature biotechnology | 36593399 | 2023 Jun |
| Polymeric microneedles enable simultaneous delivery of cancer immunomodulatory drugs and detection of skin biomarkers. | Dosta, Pere; Puigmal, Núria; Cryer, Alexander M; Rodríguez, Alma L; Scott, Ella; Weissleder, Ralph; Miller, Miles A; Artzi, Natalie | Theranostics | 36593949 | 2023 |
| Dynamics of endogenous PARP1 and PARP2 during DNA damage revealed by live-cell single-molecule imaging. | Mahadevan, Jyothi; Jha, Asmita; Rudolph, Johannes; Bowerman, Samuel; Narducci, Domenic; Hansen, Anders S; Luger, Karolin | iScience | 36594010 | 2023 Jan 20 |
| Mycobacterium tuberculosis Requires the Outer Membrane Lipid Phthiocerol Dimycocerosate for Starvation-Induced Antibiotic Tolerance. | Block, Alisha M; Namugenyi, Sarah B; Palani, Nagendra P; Brokaw, Alyssa M; Zhang, Leanne; Beckman, Kenneth B; Tischler, Anna D | mSystems | 36598240 | 2023 Jan 04 |
| Wafer-Scale Fabrication of Uniform, Micrometer-Sized, Triangular Membranes on Sapphire for High-Speed Protein Sensing in a Nanopore. | Xia, Pengkun; Rahman Laskar, Md Ashiqur; Wang, Chao | ACS applied materials & interfaces | 36598264 | 2023 Jan 18 |
| Lactate metabolism is essential in early-onset mitochondrial myopathy. | Chen, Zhenkang; Bordieanu, Bogdan; Kesavan, Rushendhiran; Lesner, Nicholas P; Venigalla, Siva Sai Krishna; Shelton, Spencer D; DeBerardinis, Ralph J; Mishra, Prashant | Science advances | 36598990 | 2023 Jan 04 |
| Parkinson's Disease Genes VPS35 and EIF4G1 Interact Genetically and Converge on α-Synuclein. | Dhungel, Nripesh; Eleuteri, Simona; Li, Ling-Bo; Kramer, Nicholas J; Chartron, Justin W; Spencer, Brian; Kosberg, Kori; Fields, Jerel Adam; Stafa, Klodjan; Adame, Anthony; Lashuel, Hilal; Frydman, Judith; Shen, Kang; Masliah, Eliezer; Gitler, Aaron D | Neuron | 36603548 | 2023 Jan 04 |
| Prediction of effector protein structures from fungal phytopathogens enables evolutionary analyses. | Seong, Kyungyong; Krasileva, Ksenia V | Nature microbiology | 36604508 | 2023 Jan |
| A transcription factor atlas of directed differentiation. | Joung, Julia; Ma, Sai; Tay, Tristan; Geiger-Schuller, Kathryn R; Kirchgatterer, Paul C; Verdine, Vanessa K; Guo, Baolin; Arias-Garcia, Mario A; Allen, William E; Singh, Ankita; Kuksenko, Olena; Abudayyeh, Omar O; Gootenberg, Jonathan S; Fu, Zhanyan; Macrae, Rhiannon K; Buenrostro, Jason D; Regev, Aviv; Zhang, Feng | Cell | 36608654 | 2023 Jan 05 |
| National-scale simulation of human movement in a spatially coupled individual-based model of malaria in Burkina Faso. | Zupko, Robert J; Nguyen, Tran Dang; Wesolowski, Amy; Gerardin, Jaline; Boni, Maciej F | Scientific reports | 36609584 | 2023 Jan 06 |
| SARS-CoV-2 booster vaccination rescues attenuated IgG1 memory B cell response in primary antibody deficiency patients. | Lin, Frank J; Doss, Alexa Michelle Altman; Davis-Adams, Hannah G; Adams, Lucas J; Hanson, Christopher H; VanBlargan, Laura A; Liang, Chieh-Yu; Chen, Rita E; Monroy, Jennifer Marie; Wedner, H James; Kulczycki, Anthony; Mantia, Tarisa L; O'Shaughnessy, Caitlin C; Raju, Saravanan; Zhao, Fang R; Rizzi, Elise; Rigell, Christopher J; Dy, Tiffany Biason; Kau, Andrew L; Ren, Zhen; Turner, Jackson S; O'Halloran, Jane A; Presti, Rachel M; Fremont, Daved H; Kendall, Peggy L; Ellebedy, Ali H; Mudd, Philip A; Diamond, Michael S; Zimmerman, Ofer; Laidlaw, Brian J | Frontiers in immunology | 36618402 | 2022 |
| Understanding and modeling nerve-cancer interactions. | Le, Thanh T; Oudin, Madeleine J | Disease models & mechanisms | 36621886 | 2023 Jan 01 |
| Modeling Oral-Esophageal Squamous Cell Carcinoma in 3D Organoids. | Flashner, Samuel; Martin, Cecilia; Matsuura, Norihiro; Shimonosono, Masataka; Tomita, Yasuto; Morimoto, Masaki; Okolo, Ogoegbunam; Yu, Victoria X; Parikh, Anuraag S; Klein-Szanto, Andres J P; Yan, Kelley; Gabre, Joel T; Lu, Chao; Momen-Heravi, Fatemeh; Rustgi, Anil K; Nakagawa, Hiroshi | Journal of visualized experiments : JoVE | 36622034 | 2022 Dec 23 |
| Longitudinal, Multi-Platform Metagenomics Yields a High-Quality Genomic Catalog and Guides an In Vitro Model for Cheese Communities. | Saak, Christina C; Pierce, Emily C; Dinh, Cong B; Portik, Daniel; Hall, Richard; Ashby, Meredith; Dutton, Rachel J | mSystems | 36622155 | 2023 Feb 23 |
| Brominated lipid probes expose structural asymmetries in constricted membranes. | Moss 3rd, Frank R; Lincoff, James; Tucker, Maxwell; Mohammed, Arshad; Grabe, Michael; Frost, Adam | Nature structural & molecular biology | 36624348 | 2023 Feb |
| Live Cell Lineage Tracing of Dormant Cancer Cells. | Kim, Hyuna; Wirasaputra, Anna; Mohammadi, Farnaz; Kundu, Aritra Nath; Esteves, Jennifer A E; Heiser, Laura M; Meyer, Aaron S; Peyton, Shelly R | Advanced healthcare materials | 36625629 | 2023 Jun |
| Proline and glucose metabolic reprogramming supports vascular endothelial and medial biomass in pulmonary arterial hypertension. | Wertheim, Bradley M; Wang, Rui-Sheng; Guillermier, Christelle; Hütter, Christiane Vr; Oldham, William M; Menche, Jörg; Steinhauser, Matthew L; Maron, Bradley A | JCI insight | 36626231 | 2023 Feb 22 |
| Differential Requirement for IRGM Proteins during Tuberculosis Infection in Mice. | Wilburn, Kaley M; Meade, Rachel K; Heckenberg, Emma M; Dockterman, Jacob; Coers, Jörn; Sassetti, Christopher M; Olive, Andrew J; Smith, Clare M | Infection and immunity | 36629440 | 2023 Feb 16 |
| Qualitative exploration of melanoma awareness in black people in the USA. | de Vere Hunt, Isabella; Owen, Sidney; Amuzie, Adaure; Nava, Vanessa; Tomz, Anna; Barnes, Leandra; Robinson, June K; Lester, Jenna; Swetter, Susan; Linos, Eleni | BMJ open | 36631232 | 2023 Jan 11 |
| PRR14 organizes H3K9me3-modified heterochromatin at the nuclear lamina. | Kiseleva, Anna A; Cheng, Yu-Chia; Smith, Cheryl L; Katz, Richard A; Poleshko, Andrey | Nucleus (Austin, Tex.) | 36633363 | 2023 Dec |
| Unraveling the dynamics of dopamine release and its actions on target cells. | Sippy, Tanya; Tritsch, Nicolas X | Trends in neurosciences | 36635111 | 2023 Mar |
| An E3 ligase network engages GCN1 to promote the degradation of translation factors on stalled ribosomes. | Oltion, Keely; Carelli, Jordan D; Yang, Tangpo; See, Stephanie K; Wang, Hao-Yuan; Kampmann, Martin; Taunton, Jack | Cell | 36638793 | 2023 Jan 19 |
| Stress promotes RNA G-quadruplex folding in human cells. | Kharel, Prakash; Fay, Marta; Manasova, Ekaterina V; Anderson, Paul J; Kurkin, Alexander V; Guo, Junjie U; Ivanov, Pavel | Nature communications | 36639366 | 2023 Jan 13 |
| Electrical signals in the ER are cell type and stimulus specific with extreme spatial compartmentalization in neurons. | Campbell, Evan P; Abushawish, Ahmed A; Valdez, Lauren A; Bell, Miriam K; Haryono, Melita; Rangamani, Padmini; Bloodgood, Brenda L | Cell reports | 36640310 | 2023 Jan 31 |
| RAMIHM generates fully human monoclonal antibodies by rapid mRNA immunization of humanized mice and BCR-seq. | Ren, Ping; Peng, Lei; Yang, Luojia; Suzuki, Kazushi; Fang, Zhenhao; Renauer, Paul A; Lin, Qianqian; Bai, Meizhu; Li, Tongqing; Clark, Paul; Klein, Daryl; Chen, Sidi | Cell chemical biology | 36640761 | 2023 Jan 19 |
| Machine learning dissection of human accelerated regions in primate neurodevelopment. | Whalen, Sean; Inoue, Fumitaka; Ryu, Hane; Fair, Tyler; Markenscoff-Papadimitriou, Eirene; Keough, Kathleen; Kircher, Martin; Martin, Beth; Alvarado, Beatriz; Elor, Orry; Laboy Cintron, Dianne; Williams, Alex; Hassan Samee, Md Abul; Thomas, Sean; Krencik, Robert; Ullian, Erik M; Kriegstein, Arnold; Rubenstein, John L; Shendure, Jay; Pollen, Alex A; Ahituv, Nadav; Pollard, Katherine S | Neuron | 36640767 | 2023 Mar 15 |
| Cell jamming regulates epithelial chiral morphogenesis. | Rahman, Tasnif; Peters, Frank; Wan, Leo Q | Journal of biomechanics | 36641827 | 2023 Jan |
| Active Microphase Separation in Mixtures of Microtubules and Tip-Accumulating Molecular Motors. | Lemma, Bezia; Mitchell, Noah P; Subramanian, Radhika; Needleman, Daniel J; Dogic, Zvonimir | Physical review. X | 36643940 | 2022 |
| Droplet-based transcriptome profiling of individual synapses. | Niu, Muchun; Cao, Wenjian; Wang, Yongcheng; Zhu, Qiangyuan; Luo, Jiayi; Wang, Baiping; Zheng, Hui; Weitz, David A; Zong, Chenghang | Nature biotechnology | 36646931 | 2023 Sep |
| Ligand-tethered lipid nanoparticles for targeted RNA delivery to treat liver fibrosis. | Han, Xuexiang; Gong, Ningqiang; Xue, Lulu; Billingsley, Margaret M; El-Mayta, Rakan; Shepherd, Sarah J; Alameh, Mohamad-Gabriel; Weissman, Drew; Mitchell, Michael J | Nature communications | 36650129 | 2023 Jan 17 |
| A practical approach to curate clonal hematopoiesis of indeterminate potential in human genetic data sets. | Vlasschaert, Caitlyn; Mack, Taralynn; Heimlich, J Brett; Niroula, Abhishek; Uddin, Md Mesbah; Weinstock, Joshua; Sharber, Brian; Silver, Alexander J; Xu, Yaomin; Savona, Michael; Gibson, Christopher; Lanktree, Matthew B; Rauh, Michael J; Ebert, Benjamin L; Natarajan, Pradeep; Jaiswal, Siddhartha; Bick, Alexander G | Blood | 36652671 | 2023 May 04 |
| Functional heterogeneity in the memory B-cell response. | Henry, Brittany; Laidlaw, Brian J | Current opinion in immunology | 36652774 | 2023 Feb |
| Ensemble-specific deficit in neuronal intrinsic excitability in aged mice. | Chen, Lingxuan; Francisco, Taylor R; Baggetta, Austin M; Zaki, Yosif; Ramirez, Steve; Clem, Roger L; Shuman, Tristan; Cai, Denise J | Neurobiology of aging | 36652783 | 2023 Mar |
| Nanoparticle protein corona: from structure and function to therapeutic targeting. | Bashiri, Ghazal; Padilla, Marshall S; Swingle, Kelsey L; Shepherd, Sarah J; Mitchell, Michael J; Wang, Karin | Lab on a chip | 36655824 | 2023 Mar 14 |
| CRISPR mediated transactivation in the human disease vector Aedes aegypti. | Bui, Michelle; Dalla Benetta, Elena; Dong, Yuemei; Zhao, Yunchong; Yang, Ting; Li, Ming; Antoshechkin, Igor A; Buchman, Anna; Bottino-Rojas, Vanessa; James, Anthony A; Perry, Michael W; Dimopoulos, George; Akbari, Omar S | PLoS pathogens | 36656895 | 2023 Jan |
| Soluble and cell-based markers of immune checkpoint inhibitor-associated nephritis. | Sise, Meghan E; Wang, Qiyu; Seethapathy, Harish; Moreno, Daiana; Harden, Destiny; Smith, R Neal; Rosales, Ivy A; Colvin, Robert B; Chute, Sarah; Cornell, Lynn D; Herrmann, Sandra M; Fadden, Riley; Sullivan, Ryan J; Yang, Nancy J; Barmettler, Sara; Wells, Sophia; Gupta, Shruti; Villani, Alexandra-Chloe; Reynolds, Kerry L; Farmer, Jocelyn | Journal for immunotherapy of cancer | 36657813 | 2023 Jan |
| DNA Methylation Dynamics During Esophageal Epithelial Regeneration Following Repair with Acellular Silk Fibroin Grafts in Rat. | Urban, Lauren A; Li, Jiachun; Gundogdu, Gokhan; Trinh, Annie; Shao, Hanjuan; Nguyen, Travis; Mauney, Joshua R; Downing, Timothy L | Advanced biology | 36658732 | 2023 May |
| The Actin Crosslinker Fascin Regulates Cell Chirality. | Zhang, Haokang; Fan, Jie; Maclin, Joshua M A; Wan, Leo Q | Advanced biology | 36658789 | 2023 Jun |
| Combining Metformin and Drug-Loaded Kidney-Targeting Micelles for Polycystic Kidney Disease. | Jiang, Kairui; Huang, Yi; Chung, Eun Ji | Cellular and molecular bioengineering | 36660586 | 2023 Feb |
| Species-specific self-DNA detection mechanisms by mammalian cyclic GMP-AMP synthases. | Mosallanejad, Kenta; Kennedy, Stephanie N; Bahleda, Kristin M; Slavik, Kailey M; Zhou, Wen; Govande, Apurva A; Hancks, Dustin C; Kranzusch, Philip J; Kagan, Jonathan C | Science immunology | 36662885 | 2023 Jan 20 |
| Geographic and temporal trends in fentanyl-detected deaths in Connecticut, 2009-2019. | Lu, Haidong; Crawford, Forrest W; Gonsalves, Gregg S; Grau, Lauretta E | Annals of epidemiology | 36669599 | 2023 Mar |
| Predicting Long-Term Recovery of Consciousness in Prolonged Disorders of Consciousness Based on Coma Recovery Scale-Revised Subscores: Validation of a Machine Learning-Based Prognostic Index. | Magliacano, Alfonso; Liuzzi, Piergiuseppe; Formisano, Rita; Grippo, Antonello; Angelakis, Efthymios; Thibaut, Aurore; Gosseries, Olivia; Lamberti, Gianfranco; Noé, Enrique; Bagnato, Sergio; Edlow, Brian L; Lejeune, Nicolas; Veeramuthu, Vigneswaran; Trojano, Luigi; Zasler, Nathan; Schnakers, Caroline; Bartolo, Michelangelo; Mannini, Andrea; Estraneo, Anna; IBIA DoC-SIG | Brain sciences | 36672033 | 2022 Dec 27 |
| The role of firearm and alcohol availability in firearm suicide: A population-based weighted case-control study. | Pear, Veronica A; Wintemute, Garen J; Jewell, Nicholas P; Ahern, Jennifer | Health & place | 36681063 | 2023 Jan |
| Phase Separation in Biology and Disease; Current Perspectives and Open Questions. | Boeynaems, Steven; Chong, Shasha; Gsponer, Jörg; Holt, Liam; Milovanovic, Dragomir; Mitrea, Diana M; Mueller-Cajar, Oliver; Portz, Bede; Reilly, John F; Reinkemeier, Christopher D; Sabari, Benjamin R; Sanulli, Serena; Shorter, James; Sontag, Emily; Strader, Lucia; Stachowiak, Jeanne; Weber, Stephanie C; White, Michael; Zhang, Huaiying; Zweckstetter, Markus; Elbaum-Garfinkle, Shana; Kriwacki, Richard | Journal of molecular biology | 36690068 | 2023 Mar 01 |
| An atlas of lamina-associated chromatin across twelve human cell types reveals an intermediate chromatin subtype. | Shah, Parisha P; Keough, Kathleen C; Gjoni, Ketrin; Santini, Garrett T; Abdill, Richard J; Wickramasinghe, Nadeera M; Dundes, Carolyn E; Karnay, Ashley; Chen, Angela; Salomon, Rachel E A; Walsh, Patrick J; Nguyen, Son C; Whalen, Sean; Joyce, Eric F; Loh, Kyle M; Dubois, Nicole; Pollard, Katherine S; Jain, Rajan | Genome biology | 36691074 | 2023 Jan 23 |
| Twelve-hour rhythms in transcript expression within the human dorsolateral prefrontal cortex are altered in schizophrenia. | Scott, Madeline R; Zong, Wei; Ketchesin, Kyle D; Seney, Marianne L; Tseng, George C; Zhu, Bokai; McClung, Colleen A | PLoS biology | 36693045 | 2023 Jan |
| Metabolic reprogramming underlies cavefish muscular endurance despite loss of muscle mass and contractility. | Olsen, Luke; Levy, Michaella; Medley, J Kyle; Hassan, Huzaifa; Miller, Brandon; Alexander, Richard; Wilcock, Emma; Yi, Kexi; Florens, Laurence; Weaver, Kyle; McKinney, Sean A; Peuß, Robert; Persons, Jenna; Kenzior, Alexander; Maldonado, Ernesto; Delventhal, Kym; Gluesenkamp, Andrew; Mager, Edward; Coughlin, David; Rohner, Nicolas | Proceedings of the National Academy of Sciences of the United States of America | 36693105 | 2023 Jan 31 |
| Effects of Wearable Fitness Trackers and Activity Adequacy Mindsets on Affect, Behavior, and Health: Longitudinal Randomized Controlled Trial. | Zahrt, Octavia Hedwig; Evans, Kristopher; Murnane, Elizabeth; Santoro, Erik; Baiocchi, Michael; Landay, James; Delp, Scott; Crum, Alia | Journal of medical Internet research | 36696172 | 2023 Jan 25 |
| Immune-Epithelial Cross Talk in Regeneration and Repair. | Guenin-Mace, Laure; Konieczny, Piotr; Naik, Shruti | Annual review of immunology | 36696569 | 2023 Apr 26 |
| Minimal synthetic enhancers reveal control of the probability of transcriptional engagement and its timing by a morphogen gradient. | Alamos, Simon; Reimer, Armando; Westrum, Clay; Turner, Meghan A; Talledo, Paul; Zhao, Jiaxi; Luu, Emma; Garcia, Hernan G | Cell systems | 36696901 | 2023 Mar 15 |
| Ionizable lipid nanoparticles deliver mRNA to pancreatic β cells via macrophage-mediated gene transfer. | Melamed, Jilian R; Yerneni, Saigopalakrishna S; Arral, Mariah L; LoPresti, Samuel T; Chaudhary, Namit; Sehrawat, Anuradha; Muramatsu, Hiromi; Alameh, Mohamad-Gabriel; Pardi, Norbert; Weissman, Drew; Gittes, George K; Whitehead, Kathryn A | Science advances | 36706177 | 2023 Jan 27 |
| Chromatin complex dependencies reveal targeting opportunities in leukemia. | Najm, Fadi J; DeWeirdt, Peter; Moore, Molly M; Bevill, Samantha M; El Farran, Chadi A; Macias, Kevin A; Hegde, Mudra; Waterbury, Amanda L; Liau, Brian B; van Galen, Peter; Doench, John G; Bernstein, Bradley E | Nature communications | 36707513 | 2023 Jan 27 |
| Mechanical loading is required for initiation of extracellular matrix deposition at the developing murine myotendinous junction. | Lipp, Sarah N; Jacobson, Kathryn R; Colling, Haley A; Tuttle, Tyler G; Miles, Dalton T; McCreery, Kaitlin P; Calve, Sarah | Matrix biology : journal of the International Society for Matrix Biology | 36709857 | 2023 Feb |
| Antimicrobial mitochondrial reactive oxygen species induction by lung epithelial metabolic reprogramming. | Wang, Yongxing; Kulkarni, Vikram V; Pantaleón García, Jezreel; Leiva-Juárez, Miguel M; Goldblatt, David L; Gulraiz, Fahad; Chen, Jichao; Donepudi, Sri Ramya; Lorenzi, Philip L; Wang, Hao; Wong, Lee-Jun; Tuvim, Michael J; Evans, Scott E | bioRxiv : the preprint server for biology | 36711510 | 2023 Jan 20 |
| An entorhinal-like region in food-caching birds. | Applegate, Marissa C; Gutnichenko, Konstantin S; Mackevicius, Emily L; Aronov, Dmitriy | bioRxiv : the preprint server for biology | 36711539 | 2023 Jan 06 |
| Structure and DNA bridging activity of the essential Rec114â€"Mei4 trimer interface. | Liu, Kaixian; Grasso, Emily M; Pu, Stephen; Liu, Shixin; Eliezer, David; Keeney, Scott | bioRxiv : the preprint server for biology | 36711595 | 2023 Jan 18 |
| Fusion of dysfunction muscle stem cells with myofibers induces sarcopenia in mice. | Wang, Xun; Mishra, Prashant | bioRxiv : the preprint server for biology | 36711602 | 2023 Jan 21 |
| Trophoblast organoids with physiological polarity model placental structure and function. | Yang, Liheng; Liang, Pengfei; Yang, Huanghe; Coyne, Carolyn B | bioRxiv : the preprint server for biology | 36711688 | 2023 Jul 17 |
| A dual sgRNA library design to probe genetic modifiers using genome-wide CRISPRi screens. | Guna, Alina; Page, Katharine R; Replogle, Joseph M; Esantsi, Theodore K; Wang, Maxine L; Weissman, Jonathan S; Voorhees, Rebecca M | bioRxiv : the preprint server for biology | 36711738 | 2023 Aug 14 |
| Population-level interactions among PV, SOM, and Pyramidal neurons in cortex. | Potter, Christian T; Bassi, Constanza D; Runyan, Caroline A | bioRxiv : the preprint server for biology | 36711788 | 2023 Jan 09 |
| Base editing as a genetic treatment for spinal muscular atrophy. | Alves, Christiano R R; Ha, Leillani L; Yaworski, Rebecca; Lazzarotto, Cicera R; Christie, Kathleen A; Reilly, Aoife; Beauvais, Ariane; Doll, Roman M; de la Cruz, Demitri; Maguire, Casey A; Swoboda, Kathryn J; Tsai, Shengdar Q; Kothary, Rashmi; Kleinstiver, Benjamin P | bioRxiv : the preprint server for biology | 36711797 | 2023 Jan 21 |
| Disease-associated patterns of acetylation stabilize tau fibril formation. | Li, Li; Nguyen, Binh; Mullapudi, Vishruth; Saelices, Lorena; Joachimiak, Lukasz A | bioRxiv : the preprint server for biology | 36711822 | 2023 Jan 10 |
| High intraspecies allelic diversity in Arabidopsis NLR immune receptors is associated with distinct genomic and epigenomic features. | Sutherland, Chandler A; Prigozhin, Daniil M; Monroe, J Grey; Krasileva, Ksenia V | bioRxiv : the preprint server for biology | 36711945 | 2023 Oct 05 |
| Impaired polyamine metabolism causes behavioral and neuroanatomical defects in a novel mouse model of Snyder-Robinson Syndrome. | Akinyele, Oluwaseun; Munir, Anushe; Johnson, Marie A; Perez, Megan S; Gao, Yuan; Foley, Jackson R; Wu, Yijen; Murray-Stewart, Tracy; Casero, Robert A; Bayir, Hulya; Kemaladewi, Dwi U | bioRxiv : the preprint server for biology | 36711956 | 2023 Feb 07 |
| Focused ultrasound-mediated brain genome editing. | Leong, Kam; Lao, Yeh-Hsing; Ji, Robin; Zhou, Joyce; Snow, Kathy; Kwon, Nancy; Saville, Ethan; He, Siyu; Chauhan, Shradha; Chi, Chun-Wei; Datta, Malika; Zhang, Hairong; Quek, Chai Hoon; Cai, Sarah; Li, Mingqiang; Gaitan, Yaned; Bechtel, Lawrence; Wu, Shih-Ying; Lutz, Cathleen; Tomer, Raju; Murray, Stephen; Chavez, Alejandro; Konofagou, Elisa | Research square | 36712096 | 2023 Jan 20 |
| High Throughput Viability Assay for Microbiology. | Meyer, Christian T; Lynch, Grace K; Stamo, Dana F; Miller, Eugene J; Chatterjee, Anushree; Kralj, Joel M | bioRxiv : the preprint server for biology | 36712102 | 2023 Jan 04 |
| Autophagy collaborates with apoptosis pathways to control myelination specificity and function. | Zhang, Tingxin; Bae, Han-Gyu; Bhambri, Aksheev; Zhang, Yihe; Barbosa, Daniela; Xue, Jumin; Wazir, Sabeen; Mulinyawe, Sara B; Kim, Jun Hee; Sun, Lu O | bioRxiv : the preprint server for biology | 36712125 | 2023 Jan 02 |
| Interfacial cavitation. | Henzel, Thomas; Nijjer, Japinder; Chockalingam, S; Wahdat, Hares; Crosby, Alfred J; Yan, Jing; Cohen, Tal | PNAS nexus | 36714841 | 2022 Sep |
| Dynamic states of cervical epithelia during pregnancy and epithelial barrier disruption. | Cooley, Anne; Madhukaran, ShanmugaPriyaa; Stroebele, Elizabeth; Colon Caraballo, Mariano; Wang, Lei; Akgul, Yucel; Hon, Gary C; Mahendroo, Mala | iScience | 36718364 | 2023 Feb 17 |
| Exploring the genetics of rhythmic perception and musical engagement in the Vanderbilt Online Musicality Study. | Gustavson, Daniel E; Coleman, Peyton L; Wang, Youjia; Nitin, Rachana; Petty, Lauren E; Bush, Catherine T; Mosing, Miriam A; Wesseldijk, Laura W; Ullén, Fredrik; 23 and Me Research Team; Below, Jennifer E; Cox, Nancy J; Gordon, Reyna L | Annals of the New York Academy of Sciences | 36718543 | 2023 Mar |
| Developmental trajectory of extracellular vesicle characteristics from the lungs of preterm infants. | Ransom, Meaghan A; Bunn, Kaitlyn E; Negretti, Nicholas M; Jetter, Christopher S; Bressman, Zachary J; Sucre, Jennifer M S; Pua, Heather H | American journal of physiology. Lung cellular and molecular physiology | 36719083 | 2023 Mar 01 |
| SynthSR: A public AI tool to turn heterogeneous clinical brain scans into high-resolution T1-weighted images for 3D morphometry. | Iglesias, Juan E; Billot, Benjamin; Balbastre, Yaël; Magdamo, Colin; Arnold, Steven E; Das, Sudeshna; Edlow, Brian L; Alexander, Daniel C; Golland, Polina; Fischl, Bruce | Science advances | 36724222 | 2023 Feb 03 |
| MicroRNAs in Macrophages: Regulators of Activation and Function. | Sprenkle, Neil T; Serezani, C Henrique; Pua, Heather H | Journal of immunology (Baltimore, Md. : 1950) | 36724439 | 2023 Feb 15 |
| Diverse logics and grammar encode notochord enhancers. | Song, Benjamin P; Ragsac, Michelle F; Tellez, Krissie; Jindal, Granton A; Grudzien, Jessica L; Le, Sophia H; Farley, Emma K | Cell reports | 36729834 | 2023 Feb 28 |
| Structure of Geobacter cytochrome OmcZ identifies mechanism of nanowire assembly and conductivity. | Gu, Yangqi; Guberman-Pfeffer, Matthew J; Srikanth, Vishok; Shen, Cong; Giska, Fabian; Gupta, Kallol; Londer, Yuri; Samatey, Fadel A; Batista, Victor S; Malvankar, Nikhil S | Nature microbiology | 36732469 | 2023 Feb |
| Phagocytosis in the retina promotes local insulin production in the eye. | Iker Etchegaray, J; Kelley, Shannon; Penberthy, Kristen; Karvelyte, Laura; Nagasaka, Yosuke; Gasperino, Sofia; Paul, Soumen; Seshadri, Vikram; Raymond, Michael; Marco, Ana Royo; Pinney, Jonathan; Stremska, Marta; Barron, Brady; Lucas, Christopher; Wase, Nishikant; Fan, Yong; Unanue, Emil; Kundu, Bijoy; Burstyn-Cohen, Tal; Perry, Justin; Ambati, Jayakrishna; Ravichandran, Kodi S | Nature metabolism | 36732622 | 2023 Feb |
| Integrative in situ mapping of single-cell transcriptional states and tissue histopathology in a mouse model of Alzheimer's disease. | Zeng, Hu; Huang, Jiahao; Zhou, Haowen; Meilandt, William J; Dejanovic, Borislav; Zhou, Yiming; Bohlen, Christopher J; Lee, Seung-Hye; Ren, Jingyi; Liu, Albert; Tang, Zefang; Sheng, Hao; Liu, Jia; Sheng, Morgan; Wang, Xiao | Nature neuroscience | 36732642 | 2023 Mar |
| Super-multiplexing excitation spectral microscopy with multiple fluorescence bands. | Chen, Kun; Li, Wan; Xu, Ke | Biomedical optics express | 36733753 | 2022 Nov 01 |
| Acoustofluidic assembly of primary tumor-derived organotypic cell clusters for rapid evaluation of cancer immunotherapy. | Wu, Zhuhao; Ao, Zheng; Cai, Hongwei; Li, Xiang; Chen, Bin; Tu, Honglei; Wang, Yijie; Lu, Rongze Olivia; Gu, Mingxia; Cheng, Liang; Lu, Xin; Guo, Feng | Journal of nanobiotechnology | 36739414 | 2023 Feb 04 |
| The Musical Abilities, Pleiotropy, Language, and Environment (MAPLE) Framework for Understanding Musicality-Language Links Across the Lifespan. | Nayak, Srishti; Coleman, Peyton L; Ladányi, Enikő; Nitin, Rachana; Gustavson, Daniel E; Fisher, Simon E; Magne, Cyrille L; Gordon, Reyna L | Neurobiology of language (Cambridge, Mass.) | 36742012 | 2022 |
| Uncovering novel regulators of memory using C. elegans genetic and genomic analysis. | Brandel-Ankrapp, Katie L; Arey, Rachel N | Biochemical Society transactions | 36744642 | 2023 Feb 27 |
| Testing the In Vitro and In Vivo Efficiency of mRNA-Lipid Nanoparticles Formulated by Microfluidic Mixing. | El-Mayta, Rakan; Padilla, Marshall S; Billingsley, Margaret M; Han, Xuexiang; Mitchell, Michael J | Journal of visualized experiments : JoVE | 36744791 | 2023 Jan 20 |
| Functional maturation of kidney organoid tubules: Piezo1-mediated Ca2+ signaling. | Carrisoza-Gaytán, Rolando; Kroll, Katharina T; Hiratsuka, Ken; Gupta, Navin R; Morizane, Ryuji; Lewis, Jennifer A; Satlin, Lisa M | American journal of physiology. Cell physiology | 36745528 | 2023 Feb 06 |
| Cholecystokinin-A Signaling Regulates Automaticity of Pacemaker Cardiomyocytes. | Ruan, Hongmei; Mandla, Ravi; Ravi, Namita; Galang, Giselle; Soe, Amanda W; Olgin, Jeffrey E; Lang, Di; Vedantham, Vasanth | bioRxiv : the preprint server for biology | 36747643 | 2023 Aug 28 |
| Circadian rhythm disruption is associated with skeletal muscle dysfunction within the blind Mexican Cavefish. | Olsen, Luke; Krishnan, Jaya; Banks, Charles; Hassan, Huzaifa; Rohner, Nicolas | bioRxiv : the preprint server for biology | 36747688 | 2023 Jan 25 |
| Anteromedial Thalamus Gates the Selection & Stabilization of Long-Term Memories. | Toader, Andrew C; Regalado, Josue M; Li, Yan Ran; Terceros, Andrea; Yadav, Nakul; Kumar, Suraj; Satow, Sloane; Hollunder, Florian; Bonito-Oliva, Alessandra; Rajasethupathy, Priya | bioRxiv : the preprint server for biology | 36747720 | 2023 Jan 28 |
| Systematically characterizing the roles of E3-ligase family members in inflammatory responses with massively parallel Perturb-seq. | Geiger-Schuller, Kathryn; Eraslan, Basak; Kuksenko, Olena; Dey, Kushal K; Jagadeesh, Karthik A; Thakore, Pratiksha I; Karayel, Ozge; Yung, Andrea R; Rajagopalan, Anugraha; Meireles, Ana M; Yang, Karren Dai; Amir-Zilberstein, Liat; Delorey, Toni; Phillips, Devan; Raychowdhury, Raktima; Moussion, Christine; Price, Alkes L; Hacohen, Nir; Doench, John G; Uhler, Caroline; Rozenblatt-Rosen, Orit; Regev, Aviv | bioRxiv : the preprint server for biology | 36747789 | 2023 Jan 24 |
| Microbiome modulates immunotherapy response in cutaneous squamous cell carcinoma. | Voigt, Anita Y; Walter, Andrew; Young, Timothy; Graham, John P; Batista Bittencourt, Bruna M; de Mingo Pulido, Alvaro; Prieto, Karol; Tsai, Kenneth Y; Sundberg, John P; Oh, Julia | bioRxiv : the preprint server for biology | 36747869 | 2023 Jan 25 |
| Exploring individual differences in musical rhythm and grammar skills in school-aged children with typically developing language. | Nitin, Rachana; Gustavson, Daniel E; Aaron, Allison S; Boorom, Olivia A; Bush, Catherine T; Wiens, Natalie; Vaughan, Chloe; Persici, Valentina; Blain, Scott D; Soman, Uma; Hambrick, David Z; Camarata, Stephen M; McAuley, J Devin; Gordon, Reyna L | Scientific reports | 36750727 | 2023 Feb 07 |
| The synaptic basis of activity-dependent eye-specific competition. | Zhang, Chenghang; Yadav, Swapnil; Speer, Colenso M | Cell reports | 36753422 | 2023 Feb 28 |
| Dysfunctional Cortical Gradient Topography in Treatment-Resistant Major Depressive Disorder. | Pasquini, Lorenzo; Fryer, Susanna L; Eisendrath, Stuart J; Segal, Zindel V; Lee, Alex J; Brown, Jesse A; Saggar, Manish; Mathalon, Daniel H | Biological psychiatry. Cognitive neuroscience and neuroimaging | 36754677 | 2023 Sep |
| An E1-E2 fusion protein primes antiviral immune signalling in bacteria. | Ledvina, Hannah E; Ye, Qiaozhen; Gu, Yajie; Sullivan, Ashley E; Quan, Yun; Lau, Rebecca K; Zhou, Huilin; Corbett, Kevin D; Whiteley, Aaron T | Nature | 36755092 | 2023 Apr |
| Heritability of Childhood Music Engagement and Associations with Language and Executive Function: Insights from the Adolescent Brain Cognitive Development (ABCD) Study. | Gustavson, Daniel E; Nayak, Srishti; Coleman, Peyton L; Iversen, John R; Lense, Miriam D; Gordon, Reyna L; Maes, Hermine H | Behavior genetics | 36757558 | 2023 May |
| Multi-'omics of gut microbiome-host interactions in short- and long-term myalgic encephalomyelitis/chronic fatigue syndrome patients. | Xiong, Ruoyun; Gunter, Courtney; Fleming, Elizabeth; Vernon, Suzanne D; Bateman, Lucinda; Unutmaz, Derya; Oh, Julia | Cell host & microbe | 36758521 | 2023 Feb 08 |
| Activity-based CRISPR scanning uncovers allostery in DNA methylation maintenance machinery. | Ngan, Kevin Chun-Ho; Hoenig, Samuel M; Kwok, Hui Si; Lue, Nicholas Z; Gosavi, Pallavi M; Tanner, David A; Garcia, Emma M; Lee, Ceejay; Liau, Brian B | eLife | 36762644 | 2023 Feb 10 |
| Pericytes and the Control of Blood Flow in Brain and Heart. | Longden, Thomas A; Zhao, Guiling; Hariharan, Ashwini; Lederer, W Jonathan | Annual review of physiology | 36763972 | 2023 Feb 10 |
| Zebrafish Cancer Avatars: A Translational Platform for Analyzing Tumor Heterogeneity and Predicting Patient Outcomes. | Al-Hamaly, Majd A; Turner, Logan T; Rivera-Martinez, Angelica; Rodriguez, Analiz; Blackburn, Jessica S | International journal of molecular sciences | 36768609 | 2023 Jan 24 |
| Mycobacterium tuberculosis Evasion of Guanylate Binding Protein-Mediated Host Defense in Mice Requires the ESX1 Secretion System. | Olive, Andrew J; Smith, Clare M; Baer, Christina E; Coers, Jörn; Sassetti, Christopher M | International journal of molecular sciences | 36769182 | 2023 Feb 02 |
| Detergent headgroups control TolC folding in vitro. | Ikujuni, Ayotunde Paul; Budiardjo, S Jimmy; Dhar, Rik; Slusky, Joanna S G | Biophysical journal | 36772796 | 2023 Apr 04 |
| Diversity of ribosomes at the level of rRNA variation associated with human health and disease. | Rothschild, Daphna; Susanto, Teodorus Theo; Sui, Xin; Spence, Jeffrey P; Rangan, Ramya; Genuth, Naomi R; Sinnott-Armstrong, Nasa; Wang, Xiao; Pritchard, Jonathan K; Barna, Maria | bioRxiv : the preprint server for biology | 36778251 | 2023 Dec 04 |
| Population analyses of mosaic X chromosome loss identify genetic drivers and widespread signatures of cellular selection. | Liu, Aoxing; Genovese, Giulio; Zhao, Yajie; Pirinen, Matti; Zekavat, Maryam M; Kentistou, Katherine; Yang, Zhiyu; Yu, Kai; Vlasschaert, Caitlyn; Liu, Xiaoxi; Brown, Derek W; Hudjashov, Georgi; Gorman, Bryan; Dennis, Joe; Zhou, Weiyin; Momozawa, Yukihide; Pyarajan, Saiju; Tuzov, Vlad; Pajuste, Fanny-Dhelia; Aavikko, Mervi; Sipilä, Timo P; Ghazal, Awaisa; Huang, Wen-Yi; Freedman, Neal; Song, Lei; Gardner, Eugene J; FinnGen; BCAC; MVP; Sankaran, Vijay G; Palotie, Aarno; Ollila, Hanna M; Tukiainen, Taru; Chanock, Stephen J; Mägi, Reedik; Natarajan, Pradeep; Daly, Mark J; Bick, Alexander; McCarroll, Steven A; Terao, Chikashi; Loh, Po-Ru; Ganna, Andrea; Perry, John R B; Machiela, Mitchell J | medRxiv : the preprint server for health sciences | 36778285 | 2023 Jan 31 |
| Perturb-tracing enables high-content screening of multiscale 3D genome regulators. | Cheng, Yubao; Hu, Mengwei; Yang, Bing; Jensen, Tyler B; Yang, Tianqi; Yu, Ruihuan; Ma, Zhaoxia; Radda, Jonathan S D; Jin, Shengyan; Zang, Chongzhi; Wang, Siyuan | bioRxiv : the preprint server for biology | 36778402 | 2023 Nov 05 |
| The Mexican Cavefish Mount a Rapid and Sustained Regenerative Response Following Skeletal Muscle Injury. | Olsen, Luke; Hassan, Huzaifa; Keaton, Sarah; Rohner, Nicolas | bioRxiv : the preprint server for biology | 36778484 | 2023 Feb 05 |
| Oligodendrocyte-lineage cell exocytosis and L-type prostaglandin D synthase promote oligodendrocyte development and myelination. | Pan, Lin; Trimarco, Amelia; Zhang, Alice J; Fujimori, Ko; Urade, Yoshihiro; Sun, Lu O; Taveggia, Carla; Zhang, Ye | eLife | 36779701 | 2023 Feb 13 |
| Full-colour Jabuticaba-like nanostructures via the multiplex and orthogonal self-assembly of protein-conjugated quantum dots with engineered biofilms. | Deng, Zhengtao; Chen, Allen Y; Zakeri, Bijan; Zhong, Chao; Lu, Timothy K | Materials horizons | 36786820 | 2023 Apr 03 |
| Ionizable Lipid Nanoparticles for In Vivo mRNA Delivery to the Placenta during Pregnancy. | Swingle, Kelsey L; Safford, Hannah C; Geisler, Hannah C; Hamilton, Alex G; Thatte, Ajay S; Billingsley, Margaret M; Joseph, Ryann A; Mrksich, Kaitlin; Padilla, Marshall S; Ghalsasi, Aditi A; Alameh, Mohamad-Gabriel; Weissman, Drew; Mitchell, Michael J | Journal of the American Chemical Society | 36789893 | 2023 Mar 01 |
| Methods special issue: RNA-targeting technologies. | Knott, Gavin J; Lapinaite, Audrone; O'Connell, Mitchell R | Methods (San Diego, Calif.) | 36792042 | 2023 Apr |
| New Insights into Vibrio cholerae Biofilms from Molecular Biophysics to Microbial Ecology. | Tai, Jung-Shen B; Ferrell, Micah J; Yan, Jing; Waters, Christopher M | Advances in experimental medicine and biology | 36792869 | 2023 |
| Genomic structural variation: A complex but important driver of human evolution. | Soto, Daniela C; Uribe-Salazar, José M; Shew, Colin J; Sekar, Aarthi; McGinty, Sean P; Dennis, Megan Y | American journal of biological anthropology | 36794631 | 2023 Feb 16 |
| The outer mitochondrial membrane protein TMEM11 demarcates spatially restricted BNIP3/BNIP3L-mediated mitophagy. | Gok, Mehmet Oguz; Connor, Olivia M; Wang, Xun; Menezes, Cameron J; Llamas, Claire B; Mishra, Prashant; Friedman, Jonathan R | The Journal of cell biology | 36795401 | 2023 Apr 03 |
| Acoustic metamaterials-driven transdermal drug delivery for rapid and on-demand management of acute disease. | Xu, Junhua; Cai, Hongwei; Wu, Zhuhao; Li, Xiang; Tian, Chunhui; Ao, Zheng; Niu, Vivian C; Xiao, Xiao; Jiang, Lei; Khodoun, Marat; Rothenberg, Marc; Mackie, Ken; Chen, Jun; Lee, Luke P; Guo, Feng | Nature communications | 36797284 | 2023 Feb 16 |
| Growth rate is modulated by monitoring cell wall precursors in Bacillus subtilis. | Sun, Yingjie; Hürlimann, Sylvia; Garner, Ethan | Nature microbiology | 36797487 | 2023 Mar |
| Reconstruction of three-dimensional scroll waves in excitable media from two-dimensional observations using deep neural networks. | Lebert, Jan; Mittal, Meenakshi; Christoph, Jan | Physical review. E | 36797900 | 2023 Jan |
| Genome-wide mapping of the Escherichia coli PhoB regulon reveals many transcriptionally inert, intragenic binding sites. | Fitzgerald, Devon; Stringer, Anne; Smith, Carol; Lapierre, Pascal; Wade, Joseph T | bioRxiv : the preprint server for biology | 36798257 | 2023 Feb 07 |
| Single-Molecule Displacement Mapping Unveils Sign-Asymmetric Protein Charge Effects on Intraorganellar Diffusion. | Xiang, Limin; Yan, Rui; Chen, Kun; Li, Wan; Xu, Ke | Nano letters | 36802676 | 2023 Mar 08 |
| Development of top-down cortical propagations in youth. | Pines, Adam; Keller, Arielle S; Larsen, Bart; Bertolero, Maxwell; Ashourvan, Arian; Bassett, Dani S; Cieslak, Matthew; Covitz, Sydney; Fan, Yong; Feczko, Eric; Houghton, Audrey; Rueter, Amanda R; Saggar, Manish; Shafiei, Golia; Tapera, Tinashe M; Vogel, Jacob; Weinstein, Sarah M; Shinohara, Russell T; Williams, Leanne M; Fair, Damien A; Satterthwaite, Theodore D | Neuron | 36803653 | 2023 Apr 19 |
| In vitro delivery of mTOR inhibitors by kidney-targeted micelles for autosomal dominant polycystic kidney disease. | Cox, Alysia; Tung, Madelynn; Li, Hui; Hallows, Kenneth R; Chung, Eun Ji | SLAS technology | 36804177 | 2023 Aug |
| The Differential Impact of Parenting on Adolescent Externalizing Behaviors in the Context of Maternal Stress. | Miller, Kristen N; Jacobson, Kristen C | Journal of youth and adolescence | 36807232 | 2023 Jul |
| The yeast ALA synthase C-terminus positively controls enzyme structure and function. | Tran, Jenny U; Brown, Breann L | Protein science : a publication of the Protein Society | 36807942 | 2023 Apr |
| Genome-Scale CRISPR Screening Reveals Host Factors Required for Ribosome Formation and Viral Replication. | Ohlson, Maikke B; Eitson, Jennifer L; Wells, Alexandra I; Kumar, Ashwani; Jang, Seoyeon; Ni, Chunyang; Xing, Chao; Buszczak, Michael; Schoggins, John W | mBio | 36809113 | 2023 Apr 25 |
| FixItFelix: improving genomic analysis by fixing reference errors. | Behera, Sairam; LeFaive, Jonathon; Orchard, Peter; Mahmoud, Medhat; Paulin, Luis F; Farek, Jesse; Soto, Daniela C; Parker, Stephen C J; Smith, Albert V; Dennis, Megan Y; Zook, Justin M; Sedlazeck, Fritz J | Genome biology | 36810122 | 2023 Feb 21 |
| Cyclic AMP is a critical mediator of intrinsic drug resistance and fatty acid metabolism in M. tuberculosis. | Wong, Andrew I; Beites, Tiago; Planck, Kyle A; Fieweger, Rachael A; Eckartt, Kathryn A; Li, Shuqi; Poulton, Nicholas C; VanderVen, Brian C; Rhee, Kyu Y; Schnappinger, Dirk; Ehrt, Sabine; Rock, Jeremy | eLife | 36810158 | 2023 Feb 22 |
| Chronically dysregulated corticosterone impairs dopaminergic transmission in the dorsomedial striatum by sex-divergent mechanisms. | Holloway, Ashley L; Schaid, Michael D; Lerner, Talia N | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | 36810463 | 2023 Feb 21 |
| Embracing enzyme promiscuity with activity-based compressed biosensing. | Holt, Brandon Alexander; Lim, Hong Seo; Sivakumar, Anirudh; Phuengkham, Hathaichanok; Su, Melanie; Tuttle, McKenzie; Xu, Yilin; Liakakos, Haley; Qiu, Peng; Kwong, Gabriel A | Cell reports methods | 36814844 | 2023 Jan 23 |
| Cycloaddition enabled mutational profiling of 5-vinyluridine in RNA. | Gupta, Mrityunjay; Wang, Jingtian; Garfio, Chely M; Vandewalle, Abigail; Spitale, Robert C | Chemical communications (Cambridge, England) | 36815680 | 2023 Mar 14 |
| Improved Yield for the Enzymatic Synthesis of Radiolabeled Nicotinamide Adenine Dinucleotide. | Eller, Jared; Goyal, Shivansh; Cambronne, Xiaolu A | ACS bio & med chem Au | 36820310 | 2023 Feb 15 |
| Genome-wide CRISPR/Cas9 screens reveal shared and cell-specific mechanisms of resistance to SHP2 inhibition. | Wei, Wei; Geer, Mitchell J; Guo, Xinyi; Dolgalev, Igor; Sanjana, Neville E; Neel, Benjamin G | The Journal of experimental medicine | 36820830 | 2023 May 01 |
| Flagella-driven motility is a target of human Paneth cell defensin activity. | Akahoshi, Douglas T; Natwick, Dean E; Yuan, Weirong; Lu, Wuyuan; Collins, Sean R; Bevins, Charles L | PLoS pathogens | 36821624 | 2023 Feb |
| Distinct genomic contexts predict gene presence-absence variation in different pathotypes of a fungal plant pathogen. | Joubert, Pierre M; Krasileva, Ksenia V | bioRxiv : the preprint server for biology | 36824763 | 2023 Feb 17 |
| Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics. | Marinos, Georgios; Hamerich, Inga K; Debray, Reena; Obeng, Nancy; Petersen, Carola; Taubenheim, Jan; Zimmermann, Johannes; Blackburn, Dana; Samuel, Buck S; Dierking, Katja; Franke, Andre; Laudes, Matthias; Waschina, Silvio; Schulenburg, Hinrich; Kaleta, Christoph | bioRxiv : the preprint server for biology | 36824941 | 2023 Feb 18 |
| Early Selection of the Amino Acid Alphabet Was Adaptively Shaped by Biophysical Constraints of Foldability. | Makarov, Mikhail; Sanchez Rocha, Alma C; Krystufek, Robin; Cherepashuk, Ivan; Dzmitruk, Volha; Charnavets, Tatsiana; Faustino, Anneliese M; Lebl, Michal; Fujishima, Kosuke; Fried, Stephen D; Hlouchova, Klara | Journal of the American Chemical Society | 36826345 | 2023 Mar 08 |
| Redox Dependent Activation of Lung Epithelial STAT3 Is Required for Inducible Protection Against Bacterial Pneumonia. | Kulkarni, Vikram V; Wang, Yongxing; Pantaleon Garcia, Jezreel; Evans, Scott E | American journal of respiratory cell and molecular biology | 36826841 | 2023 Feb 24 |
| Leading edge competition promotes context-dependent responses to receptor inputs to resolve directional dilemmas in neutrophil migration. | Hadjitheodorou, Amalia; Bell, George R R; Ellett, Felix; Irimia, Daniel; Tibshirani, Robert; Collins, Sean R; Theriot, Julie A | Cell systems | 36827986 | 2023 Mar 15 |
| Cholesterol Regulation of Membrane Proteins Revealed by Two-Color Super-Resolution Imaging. | Yuan, Zixuan; Hansen, Scott B | Membranes | 36837753 | 2023 Feb 20 |
| Interpersonal and self-directed violence among sexual and gender minority populations: Moving research from prevalence to prevention. | Blosnich, John R | Current epidemiology reports | 36845319 | 2022 Sep |
| Resistance-resistant antibacterial treatment strategies. | Batchelder, Jonathan I; Hare, Patricia J; Mok, Wendy W K | Frontiers in antibiotics | 36845830 | 2023 |
| Charles David Allis (1951-2023). | Chi, Ping; Lewis, Peter W; Lu, Chao; Lu, Janice; Ruthenburg, Alexander J; Sabari, Benjamin R; Shechter, David; Wan, Liling; Wang, Gang Greg | Nature genetics | 36849658 | 2023 Apr |
| Confronting ethical and social issues related to the genetics of musicality. | Gordon, Reyna L; Martschenko, Daphne O; Nayak, Srishti; Niarchou, Maria; Morrison, Matthew D; Bell, Eamonn; Jacoby, Nori; Davis, Lea K | Annals of the New York Academy of Sciences | 36851882 | 2023 Apr |
| Prolonged partner separation erodes nucleus accumbens transcriptional signatures of pair bonding in male prairie voles. | Sadino, Julie M; Bradeen, Xander G; Kelly, Conor J; Brusman, Liza E; Walker, Deena M; Donaldson, Zoe R | eLife | 36852906 | 2023 Feb 28 |
| Toward Uniform Insurer Coverage for Functional MRI Following Severe Brain Injury. | Young, Michael J; Bodien, Yelena G; Freeman, Holly J; Fecchio, Matteo; Edlow, Brian L | The Journal of head trauma rehabilitation | 36854104 | 2023 Jul-Aug 01 |
| Measuring concordance of data sources used for infectious disease research in the USA: a retrospective data analysis. | Majumder, Maimuna S; Cusick, Marika; Rose, Sherri | BMJ open | 36854597 | 2023 Feb 28 |
| A parathyroid hormone/salt-inducible kinase signaling axis controls renal vitamin D activation and organismal calcium homeostasis. | Yoon, Sung-Hee; Meyer, Mark B; Arevalo Rivas, Carlos; Tekguc, Murat; Zhang, Chengcheng; Wang, Jialiang S; Castro Andrade, Christian D; Strauss, Katelyn E; Sato, Tadatoshi; Benkusky, Nancy; Lee, Seong Min; Berdeaux, Rebecca; Foretz, Marc; Sundberg, Thomas B; Xavier, Ramnik J; Adelmann, Charles H; Brooks, Daniel J; Anselmo, Anthony; Sadreyev, Ruslan I; Rosales, Ivy A; Fisher, David E; Gupta, Navin; Morizane, Ryuji; Greka, Anna; Pike, J Wesley; Mannstadt, Michael; Wein, Marc N | The Journal of clinical investigation | 36862513 | 2023 Mar 02 |
| Competing constraints shape the nonequilibrium limits of cellular decision-making. | Lammers, Nicholas C; Flamholz, Avi I; Garcia, Hernan G | Proceedings of the National Academy of Sciences of the United States of America | 36862689 | 2023 Mar 07 |
| Initial recommendations for performing, benchmarking and reporting single-cell proteomics experiments. | Gatto, Laurent; Aebersold, Ruedi; Cox, Juergen; Demichev, Vadim; Derks, Jason; Emmott, Edward; Franks, Alexander M; Ivanov, Alexander R; Kelly, Ryan T; Khoury, Luke; Leduc, Andrew; MacCoss, Michael J; Nemes, Peter; Perlman, David H; Petelski, Aleksandra A; Rose, Christopher M; Schoof, Erwin M; Van Eyk, Jennifer; Vanderaa, Christophe; Yates 3rd, John R; Slavov, Nikolai | Nature methods | 36864200 | 2023 Mar |
| cGLRs are a diverse family of pattern recognition receptors in animal innate immunity. | Li, Yao; Slavik, Kailey M; Morehouse, Benjamin R; de Oliveira Mann, Carina C; Mears, Kepler; Liu, Jingjing; Kashin, Dmitry; Schwede, Frank; Kranzusch, Philip J | bioRxiv : the preprint server for biology | 36865129 | 2023 Feb 22 |
| Myomatrix arrays for high-definition muscle recording. | Chung, Bryce; Zia, Muneeb; Thomas, Kyle; Michaels, Jonathan A; Jacob, Amanda; Pack, Andrea; Williams, Matt; Nagapudi, Kailash; Teng, Lay Heng; Arrambide, Eduardo; Ouellette, Logan; Oey, Nicole; Gibbs, Rhuna; Anschutz, Philip; Lu, Jiaao; Wu, Yu; Kashefi, Mehrdad; Oya, Tomomichi; Kersten, Rhonda; Mosberger, Alice; O'Connell, Sean; Wang, Runming; Marques, Hugo; Mendes, Ana Rita; Lenschow, Constanze; Kondakath, Gayathri; Kim, Jeong Jun; Olson, William; Quinn, Kiara; Perkins, Pierce; Gatto, Graziana; Thanawalla, Ayesha; Coltman, Susan; Kim, Taegyo; Smith, Trevor; Binder-Markey, Ben; Zaback, Martin; Thompson, Christopher K; Giszter, Simon; Person, Abigail; Goulding, Martyn; Azim, Eiman; Thakor, Nitish; O'Connor, Daniel; Trimmer, Barry; Lima, Susana Q; Carey, Megan; Pandarinath, Chethan; Costa, Rui M; Pruszynski, J Andrew; Bakir, Muhannad; Sober, Samuel J | bioRxiv : the preprint server for biology | 36865176 | 2023 Feb 22 |
| Determination of oligomeric organization of membrane proteins from native membranes at nanoscale-spatial and single-molecule resolution. | Walker, Gerard; Brown, Caroline; Ge, Xiangyu; Kumar, Shailesh; Muzumdar, Mandar D; Gupta, Kallol; Bhattacharyya, Moitrayee | bioRxiv : the preprint server for biology | 36865290 | 2023 Feb 21 |
| Tenascin-C activation of lung fibroblasts in a 3D synthetic lung extracellular matrix mimic. | Kundu, Aritra Nath; Dougan, Carey E; Mahmoud, Samar; Kilic, Alara; Panagiotou, Alexi; Irakoze, Ninette; Richbourg, Nathan; Peyton, Shelly R | bioRxiv : the preprint server for biology | 36865293 | 2023 Mar 20 |
| Altering Specificity and Autoactivity of Plant Immune Receptors Sr33 and Sr50 Via a Rational Engineering Approach. | Tamborski, Janina; Seong, Kyungyong; Liu, Furong; Staskawicz, Brian J; Krasileva, Ksenia V | Molecular plant-microbe interactions : MPMI | 36867580 | 2023 Jul |
| Biophysical forces mediated by respiration maintain lung alveolar epithelial cell fate. | Shiraishi, Kazushige; Shah, Parisha P; Morley, Michael P; Loebel, Claudia; Santini, Garrett T; Katzen, Jeremy; Basil, Maria C; Lin, Susan M; Planer, Joseph D; Cantu, Edward; Jones, Dakota L; Nottingham, Ana N; Li, Shanru; Cardenas-Diaz, Fabian L; Zhou, Su; Burdick, Jason A; Jain, Rajan; Morrisey, Edward E | Cell | 36870331 | 2023 Mar 30 |
| Co-opting signalling molecules enables logic-gated control of CAR T cells. | Tousley, Aidan M; Rotiroti, Maria Caterina; Labanieh, Louai; Rysavy, Lea Wenting; Kim, Won-Ju; Lareau, Caleb; Sotillo, Elena; Weber, Evan W; Rietberg, Skyler P; Dalton, Guillermo Nicolas; Yin, Yajie; Klysz, Dorota; Xu, Peng; de la Serna, Eva L; Dunn, Alexander R; Satpathy, Ansuman T; Mackall, Crystal L; Majzner, Robbie G | Nature | 36890224 | 2023 Mar |
| State-dependent evolutionary models reveal modes of solid tumour growth. | Lewinsohn, Maya A; Bedford, Trevor; Müller, Nicola F; Feder, Alison F | Nature ecology & evolution | 36894662 | 2023 Apr |
| The Long Noncoding RNA PRANCR Is Associated with Alternative Splicing of Fibronectin-1 in Keratinocytes. | Otten, Auke B C; Amarbayar, Oyumergen; Cai, Pengfei; Cheng, Binbin; Qu, Kun; Sun, Bryan K | The Journal of investigative dermatology | 36906126 | 2023 Sep |
| Brain Organoid Computing for Artificial Intelligence. | Cai, Hongwei; Ao, Zheng; Tian, Chunhui; Wu, Zhuhao; Liu, Hongcheng; Tchieu, Jason; Gu, Mingxia; Mackie, Ken; Guo, Feng | bioRxiv : the preprint server for biology | 36909615 | 2023 Mar 01 |
| In vitro generation of megakaryocytes from engineered mouse embryonic stem cells. | Lewis, Mitchell R; Deans, Tara L | bioRxiv : the preprint server for biology | 36909620 | 2023 Mar 01 |
| Frailty-associated dysbiosis of human microbiotas in older adults in nursing homes. | Oh, Julia; Robison, Julie; Kuchel, George A | Nature aging | 36909933 | 2022 Oct |
| Discussion of and : New Objectives for Policy Learning. | Li, Sijia; Li, Xiudi; Luedtke, Alex | Journal of the American Statistical Association | 36910906 | 2021 |
| Hypoxia Potentiates the Inflammatory Fibroblast Phenotype Promoted by Pancreatic Cancer Cell-Derived Cytokines. | Schwörer, Simon; Cimino, Francesco V; Ros, Manon; Tsanov, Kaloyan M; Ng, Charles; Lowe, Scott W; Carmona-Fontaine, Carlos; Thompson, Craig B | Cancer research | 36912618 | 2023 May 15 |
| Metabolic reprogramming via an engineered PGC-1α improves human chimeric antigen receptor T-cell therapy against solid tumors. | Lontos, Konstantinos; Wang, Yiyang; Joshi, Supriya K; Frisch, Andrew T; Watson, McLane J; Kumar, Alok; Menk, Ashley V; Wang, Yupeng; Cumberland, Rachel; Lohmueller, Jason; Carrizosa, Esteban; Boyerinas, Benjamin; Delgoffe, Greg M | Journal for immunotherapy of cancer | 36914208 | 2023 Mar |
| An integrated platform for high-throughput nanoscopy. | Barentine, Andrew E S; Lin, Yu; Courvan, Edward M; Kidd, Phylicia; Liu, Miao; Balduf, Leonhard; Phan, Timy; Rivera-Molina, Felix; Grace, Michael R; Marin, Zach; Lessard, Mark; Rios Chen, Juliana; Wang, Siyuan; Neugebauer, Karla M; Bewersdorf, Joerg; Baddeley, David | Nature biotechnology | 36914886 | 2023 Mar 13 |
| Differences in Beliefs About Suicide by Occupation in a Representative Sample of Adults in the United States, General Social Survey 2002-2021. | Blosnich, John R; Haydinger, Alexandra M; Rhoades, Harmony; De Luca, Susan M | Archives of suicide research : official journal of the International Academy for Suicide Research | 36916390 | 2023 Mar 14 |
| Neighborhood factors and triple negative breast cancer: The role of cumulative exposure to area-level risk factors. | Siegel, Scott D; Brooks, Madeline M; Berman, Jesse D; Lynch, Shannon M; Sims-Mourtada, Jennifer; Schug, Zachary T; Curriero, Frank C | Cancer medicine | 36916687 | 2023 May |
| MAHOMES II: A webserver for predicting if a metal binding site is enzymatic. | Feehan, Ryan; Copeland, Matthew; Franklin, Meghan W; Slusky, Joanna S G | Protein science : a publication of the Protein Society | 36916762 | 2023 Apr |
| Upregulation of SYNGAP1 expression in mice and human neurons by redirecting alternative splicing. | Yang, Runwei; Feng, Xinran; Arias-Cavieres, Alejandra; Mitchell, Robin M; Polo, Ashleigh; Hu, Kaining; Zhong, Rong; Qi, Cai; Zhang, Rachel S; Westneat, Nathaniel; Portillo, Cristabel A; Nobrega, Marcelo A; Hansel, Christian; Garcia Iii, Alfredo J; Zhang, Xiaochang | Neuron | 36917980 | 2023 May 17 |
| Head-on and co-directional RNA polymerase collisions orchestrate bidirectional transcription termination. | Wang, Ling; Watters, John W; Ju, Xiangwu; Lu, Genzhe; Liu, Shixin | Molecular cell | 36917983 | 2023 Apr 06 |
| Comment on: Premature delivery in the domestic sow in response to in utero delivery of AAV9 to fetal piglets. | Dave, Apeksha; Berkowitz, Cara L; Luks, Valerie L; White, Brandon M; Palanki, Rohan; Carpenter, Marco D; Riley, John S; Bose, Sourav K; Li, Haiying; Li, Li; Menon, Pallavi V; Teerdhala, Shiva; Ebrahimi, Mina; Zoltick, Philip W; Peranteau, William H | Gene therapy | 36918654 | 2023 Apr |
| Toward a global virus genomic surveillance network. | Hill, Verity; Githinji, George; Vogels, Chantal B F; Bento, Ana I; Chaguza, Chrispin; Carrington, Christine V F; Grubaugh, Nathan D | Cell host & microbe | 36921604 | 2023 Jun 14 |
| Foetal genome editing. | Bose, Sourav K; Kennedy, Kara; Peranteau, William H | Current opinion in obstetrics & gynecology | 36924409 | 2023 Apr 01 |
| Electrically regulated cell-based intervention for viral infections. | Newmyer, Sherri; Ssemadaali, Marvin A; Radhakrishnan, Harikrishnan; Javitz, Harold S; Bhatnagar, Parijat | Bioengineering & translational medicine | 36925710 | 2023 Mar |
| Neural learning rules for generating flexible predictions and computing the successor representation. | Fang, Ching; Aronov, Dmitriy; Abbott, L F; Mackevicius, Emily L | eLife | 36928104 | 2023 Mar 16 |
| Conformational ensembles explain NMR spectra of frozen intrinsically disordered proteins. | Kragelj, Jaka; Dumarieh, Rania; Xiao, Yiling; Frederick, Kendra K | Protein science : a publication of the Protein Society | 36930141 | 2023 May |
| Metabolic sensing and control in mitochondria. | Liu, Yuyang; Birsoy, Kıvanç | Molecular cell | 36931256 | 2023 Mar 16 |
| Glycocalyx engineering with heparan sulfate mimetics attenuates Wnt activity during adipogenesis to promote glucose uptake and metabolism. | Trieger, Greg W; Pessentheiner, Ariane R; Purcell, Sean C; Green, Courtney R; DeForest, Natalie; Willert, Karl; Majithia, Amit R; Metallo, Christian M; Godula, Kamil; Gordts, Philip L S M | The Journal of biological chemistry | 36931394 | 2023 May |
| CRISPR-Cas9 Methods and Key Considerations in the Production of Aedes aegypti Mutant Strains. | Sun, Ruichen; Raban, Robyn; Akbari, Omar S | Cold Spring Harbor protocols | 36931732 | 2023 Sep 01 |
| ATP/ADP biosensor organoids for drug nephrotoxicity assessment. | Susa, Koichiro; Kobayashi, Kenichi; Galichon, Pierre; Matsumoto, Takuya; Tamura, Akitoshi; Hiratsuka, Ken; Gupta, Navin R; Yazdi, Iman K; Bonventre, Joseph V; Morizane, Ryuji | Frontiers in cell and developmental biology | 36936695 | 2023 |
| Tracing Founder Mutations in Circulating and Tissue-Resident Follicular Lymphoma Precursors. | Schroers-Martin, Joseph G; Soo, Joanne; Brisou, Gabriel; Scherer, Florian; Kurtz, David M; Sworder, Brian J; Khodadoust, Michael S; Jin, Michael C; Bru, Agnès; Liu, Chih Long; Stehr, Henning; Vineis, Paolo; EPIC Consortium; Natkunam, Yasodha; Teras, Lauren R; Song, Joo Y; Nadel, Bertrand; Diehn, Maximilian; Roulland, Sandrine; Alizadeh, Ash A | Cancer discovery | 36939219 | 2023 Jun 02 |
| Integrated Physiology of the Exocrine and Endocrine Compartments in Pancreatic Diseases: Workshop Proceedings. | Mastracci, Teresa L; Apte, Minoti; Amundadottir, Laufey T; Alvarsson, Alexandra; Artandi, Steven; Bellin, Melena D; Bernal-Mizrachi, Ernesto; Caicedo, Alejandro; Campbell-Thompson, Martha; Cruz-Monserrate, Zobeida; El Ouaamari, Abdelfattah; Gaulton, Kyle J; Geisz, Andrea; Goodarzi, Mark O; Hara, Manami; Hull-Meichle, Rebecca L; Kleger, Alexander; Klein, Alison P; Kopp, Janel L; Kulkarni, Rohit N; Muzumdar, Mandar D; Naren, Anjaparavanda P; Oakes, Scott A; Olesen, Søren S; Phelps, Edward A; Powers, Alvin C; Stabler, Cherie L; Tirkes, Temel; Whitcomb, David C; Yadav, Dhiraj; Yong, Jing; Zaghloul, Norann A; Pandol, Stephen J; Sander, Maike | Diabetes | 36940317 | 2023 Apr 01 |
| Stepwise activities of mSWI/SNF family chromatin remodeling complexes direct T cell activation and exhaustion. | Battistello, Elena; Hixon, Kimberlee A; Comstock, Dawn E; Collings, Clayton K; Chen, Xufeng; Rodriguez Hernaez, Javier; Lee, Soobeom; Cervantes, Kasey S; Hinkley, Madeline M; Ntatsoulis, Konstantinos; Cesarano, Annamaria; Hockemeyer, Kathryn; Haining, W Nicholas; Witkowski, Matthew T; Qi, Jun; Tsirigos, Aristotelis; Perna, Fabiana; Aifantis, Iannis; Kadoch, Cigall | Molecular cell | 36944333 | 2023 Apr 20 |
| Incomplete transcripts dominate the Mycobacterium tuberculosis transcriptome. | Ju, Xiangwu; Li, Shuqi; Froom, Ruby; Wang, Ling; Lilic, Mirjana; Campbell, Elizabeth A; Rock, Jeremy M; Liu, Shixin | bioRxiv : the preprint server for biology | 36945399 | 2023 Mar 11 |
| CRISPRa-induced upregulation of human LAMA1 compensates for LAMA2 -deficiency in Merosin-deficient congenital muscular dystrophy. | Arockiaraj, Annie I; Johnson, Marie A; Munir, Anushe; Ekambaram, Prasanna; Lucas, Peter C; McAllister-Lucas, Linda M; Kemaladewi, Dwi U | bioRxiv : the preprint server for biology | 36945402 | 2023 Mar 07 |
| PAM-Flexible Genome Editing with an Engineered Chimeric Cas9. | Koseki, Sabrina; Hong, Lauren; Yudistyra, Vivian; Stan, Teodora; Tysinger, Emma; Silverstein, Rachel; Kramme, Christian; Amrani, Nadia; Savic, Natasha; Pacesa, Martin; Rodriguez, Tom S; Ponnapati, Manvitha; Jacobson, Joseph; Church, George; Truant, Ray; Jinek, Martin; Kleinstiver, Benjamin; Sontheimer, Erik; Chatterjee, Pranam | Research square | 36945419 | 2023 Mar 07 |
| Genome-wide screen identifies host loci that modulate M. tuberculosis fitness in immunodivergent mice. | Meade, Rachel K; Long, Jarukit E; Jinich, Adrian; Rhee, Kyu Y; Ashbrook, David G; Williams, Robert W; Sassetti, Christopher M; Smith, Clare M | bioRxiv : the preprint server for biology | 36945430 | 2023 Mar 06 |
| CYP4F2 is a human-specific determinant of circulating N-acyl amino acid levels. | Tanzo, Julia T; Li, Veronica L; Wiggenhorn, Amanda L; Moya-Garzon, Maria Dolores; Wei, Wei; Lyu, Xuchao; Dong, Wentao; Tahir, Usman A; Chen, Zsu-Zsu; Cruz, Daniel E; Deng, Shuliang; Shi, Xu; Zheng, Shuning; Guo, Yan; Sims, Mario; Abu-Remaileh, Monther; Wilson, James G; Gerszten, Robert E; Long, Jonathan Z; Benson, Mark D | bioRxiv : the preprint server for biology | 36945562 | 2023 Mar 09 |
| O-GlcNAc modification forces the formation of an α-Synuclein amyloid-strain with notably diminished seeding activity and pathology. | Balana, Aaron T; Mahul-Mellier, Anne-Laure; Nguyen, Binh A; Horvath, Mian; Javed, Afraah; Hard, Eldon R; Jasiqi, Yllza; Singh, Preeti; Afrin, Shumaila; Pedretti, Rose; Singh, Virender; Lee, Virginia M-Y; Luk, Kelvin C; Saelices, Lorena; Lashuel, Hilal A; Pratt, Matthew R | bioRxiv : the preprint server for biology | 36945566 | 2023 Mar 07 |
| Dynamics of Eastern equine encephalitis virus during the 2019 outbreak in the Northeast United States. | Hill, Verity; Koch, Robert T; Bialosuknia, Sean M; Ngo, Kiet; Zink, Steven D; Koetzner, Cheri A; Maffei, Joseph G; Dupuis, Alan P; Backenson, P Bryon; Oliver, JoAnne; Bransfield, Angela B; Misencik, Michael J; Petruff, Tanya A; Shepard, John J; Warren, Joshua L; Gill, Mandev S; Baele, Guy; Vogels, Chantal B F; Gallagher, Glen; Burns, Paul; Hentoff, Aaron; Smole, Sandra; Brown, Catherine; Osborne, Matthew; Kramer, Laura D; Armstrong, Philip M; Ciota, Alexander T; Grubaugh, Nathan D | medRxiv : the preprint server for health sciences | 36945576 | 2023 Mar 06 |
| MAHOMES II: A webserver for predicting if a metal binding site is enzymatic. | Feehan, Ryan; Copeland, Matthew; Franklin, Meghan W; Slusky, Joanna S G | bioRxiv : the preprint server for biology | 36945603 | 2023 Mar 12 |
| Dissociable contributions of the amygdala and ventral hippocampus to stress-induced changes in defensive behavior. | Pennington, Zachary T; LaBanca, Alexa R; Sompolpong, Patlapa; Wick, Zoe Christenson; Feng, Yu; Dong, Zhe; Francisco, Taylor R; Chen, Lingxuan; Fulton, Sasha L; Maze, Ian; Shuman, Tristan; Cai, Denise J | bioRxiv : the preprint server for biology | 36945605 | 2023 Mar 11 |
| Structural variation cooperates with permissive chromatin to control enhancer hijacking-mediated oncogenic transcription. | Botten, Giovanni A; Zhang, Yuannyu; Dudnyk, Kseniia; Kim, Yoon Jung; Liu, Xin; Sanders, Jacob T; Imanci, Aygun; Droin, Nathalie; Cao, Hui; Kaphle, Pranita; Dickerson, Kathryn E; Kumar, Kirthi R; Chen, Mingyi; Chen, Weina; Solary, Eric; Ly, Peter; Zhou, Jian; Xu, Jian | Blood | 36947815 | 2023 Jul 27 |
| Advancing cell-based cancer immunotherapy through stem cell engineering. | Li, Yan-Ruide; Dunn, Zachary Spencer; Yu, Yanqi; Li, Miao; Wang, Pin; Yang, Lili | Cell stem cell | 36948187 | 2023 May 04 |
| On the dependent recognition of some long zinc finger proteins. | Zuo, Zheng; Billings, Timothy; Walker, Michael; Petkov, Petko M; Fordyce, Polly M; Stormo, Gary D | Nucleic acids research | 36951113 | 2023 Jun 23 |
| Stimulating Transcription in Antibiotic-Tolerant Escherichia coli Sensitizes It to Fluoroquinolone and Nonfluoroquinolone Topoisomerase Inhibitors. | LaGree, Travis J; Byrd, Brandon A; Quelle, Ryan M; Schofield, Stephanie L; Mok, Wendy W K | Antimicrobial agents and chemotherapy | 36951560 | 2023 Apr 18 |
| Nutrigenomic regulation of sensory plasticity. | Sung, Hayeon; Vaziri, Anoumid; Wilinski, Daniel; Woerner, Riley K R; Freddolino, Peter L; Dus, Monica | eLife | 36951889 | 2023 Mar 23 |
| A gut-secreted peptide suppresses arousability from sleep. | Titos, Iris; Juginović, Alen; Vaccaro, Alexandra; Nambara, Keishi; Gorelik, Pavel; Mazor, Ofer; Rogulja, Dragana | Cell | 36958331 | 2023 Mar 30 |
| Beyond the matrix: structural and physiological advancements in mitochondrial calcium signaling. | MacEwen, Melissa J S; Sancak, Yasemin | Biochemical Society transactions | 36960768 | 2023 Apr 26 |
| Somatosensory innervation of adipose tissues. | Wang, Yu; Ye, Li | Physiology & behavior | 36965573 | 2023 Jun 01 |
| Multiscale mechanical characterization and computational modeling of fibrin gels. | Jimenez, Julian M; Tuttle, Tyler; Guo, Yifan; Miles, Dalton; Buganza-Tepole, Adrian; Calve, Sarah | Acta biomaterialia | 36965611 | 2023 May |
| Wireless in vivo Recording of Cortical Activity by an Ion-Sensitive Field Effect Transistor. | Bhatt, Suyash; Masterson, Emily; Zhu, Tianxiang; Eizadi, Jenna; George, Judy; Graupe, Nesya; Vareberg, Adam; Phillips, Jack; Bok, Ilhan; Dwyer, Matthew; Ashtiani, Alireza; Hai, Aviad | Sensors and actuators. B, Chemical | 36970106 | 2023 May 01 |
| Spatiotemporal transcriptomics reveals pathogenesis of viral myocarditis. | Mantri, Madhav; Hinchman, Meleana M; McKellar, David W; Wang, Michael F Z; Cross, Shaun T; Parker, John S L; De Vlaminck, Iwijn | Nature cardiovascular research | 36970396 | 2022 Oct |
| Drug addiction unveils a repressive methylation ceiling in EZH2-mutant lymphoma. | Kwok, Hui Si; Freedy, Allyson M; Siegenfeld, Allison P; Morriss, Julia W; Waterbury, Amanda L; Kissler, Stephen M; Liau, Brian B | Nature chemical biology | 36973442 | 2023 Mar 27 |
| High-speed low-light in vivo two-photon voltage imaging of large neuronal populations. | Platisa, Jelena; Ye, Xin; Ahrens, Allison M; Liu, Chang; Chen, Ichun Anderson; Davison, Ian G; Tian, Lei; Pieribone, Vincent A; Chen, Jerry L | Nature methods | 36973547 | 2023 Jul |
| Collateral activity of the CRISPR/RfxCas13d system in human cells. | Shi, Peiguo; Murphy, Michael R; Aparicio, Alexis O; Kesner, Jordan S; Fang, Zhou; Chen, Ziheng; Trehan, Aditi; Guo, Yang; Wu, Xuebing | Communications biology | 36977923 | 2023 Mar 28 |
| Sperm RNA Payload: Implications for Intergenerational Epigenetic Inheritance. | Liu, Simeiyun; Sharma, Upasna | International journal of molecular sciences | 36982962 | 2023 Mar 20 |
| Analysis of PEG-lipid anchor length on lipid nanoparticle pharmacokinetics and activity in a mouse model of traumatic brain injury. | Waggoner, Lauren E; Miyasaki, Katelyn F; Kwon, Ester J | Biomaterials science | 36987922 | 2023 Mar 29 |
| Spotlight on Genetic Kidney Diseases: A Call for Drug Delivery and Nanomedicine Solutions. | Trac, Noah; Ashraf, Anisa; Giblin, Joshua; Prakash, Supriya; Mitragotri, Samir; Chung, Eun Ji | ACS nano | 36988207 | 2023 Apr 11 |
| Targeted DNA integration in human cells without double-strand breaks using CRISPR-associated transposases. | Lampe, George D; King, Rebeca T; Halpin-Healy, Tyler S; Klompe, Sanne E; Hogan, Marcus I; Vo, Phuc Leo H; Tang, Stephen; Chavez, Alejandro; Sternberg, Samuel H | Nature biotechnology | 36991112 | 2023 Mar 29 |
| A single-cell atlas reveals shared and distinct immune responses and metabolic profiles in SARS-CoV-2 and HIV-1 infections. | Pan, Tony; Cao, Guoshuai; Tang, Erting; Zhao, Yu; Penaloza-MacMaster, Pablo; Fang, Yun; Huang, Jun | Frontiers in genetics | 36992700 | 2023 |
| A Microfluidic Dual-Aptamer Sandwich Assay for Rapid and Cost-Effective Detection of Recombinant Proteins. | Wen, Kechun; Chen, Yannan; Meng, Xin; Botros, Samantha; Dai, Wenting; Stojanovic, Milan N; Tomer, Raju; Lin, Qiao | Microchemical journal : devoted to the application of microtechniques in all branches of science | 36992861 | 2023 May |
| Aversive experience drives offline ensemble reactivation to link memories across days. | Zaki, Yosif; Pennington, Zachary T; Morales-Rodriguez, Denisse; Francisco, Taylor R; LaBanca, Alexa R; Dong, Zhe; Lamsifer, Sophia; Segura, Simón Carrillo; Chen, Hung-Tu; Wick, Zoé Christenson; Silva, Alcino J; van der Meer, Matthijs; Shuman, Tristan; Fenton, André; Rajan, Kanaka; Cai, Denise J | bioRxiv : the preprint server for biology | 36993254 | 2023 Aug 19 |
| A paradox promoted by microglia cannibalism shortens the lifespan of developmental microglia. | Gordon, Hannah; Schafer, Zachary T; Smith, Cody J | bioRxiv : the preprint server for biology | 36993267 | 2023 Mar 16 |
| Continuous Multiplexed Phage Genome Editing Using Recombitrons. | Fishman, Chloe B; Crawford, Kate D; Bhattarai-Kline, Santi; Zhang, Karen; González-Delgado, Alejandro; Shipman, Seth L | bioRxiv : the preprint server for biology | 36993281 | 2023 Mar 25 |
| Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing. | Zhang, Aixin; Jin, Lei; Yao, Shenqin; Matsuyama, Makoto; van Velthoven, Cindy; Sullivan, Heather; Sun, Na; Kellis, Manolis; Tasic, Bosiljka; Wickersham, Ian R; Chen, Xiaoyin | bioRxiv : the preprint server for biology | 36993334 | 2023 Nov 10 |
| RHINO restricts MMEJ activity to mitosis. | Brambati, Alessandra; Sacco, Olivia; Porcella, Sarina; Heyza, Joshua; Kareh, Mike; Schmidt, Jens C; Sfeir, Agnel | bioRxiv : the preprint server for biology | 36993461 | 2023 Mar 16 |
| Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1. | Abini-Agbomson, Stephen; Gretarsson, Kristjan; Shih, Rochelle M; Hsieh, Laura; Lou, Tracy; De Ioannes, Pablo; Vasilyev, Nikita; Lee, Rachel; Wang, Miao; Simon, Matthew; Armache, Jean-Paul; Nudler, Evgeny; Narlikar, Geeta; Liu, Shixin; Lu, Chao; Armache, Karim-Jean | bioRxiv : the preprint server for biology | 36993485 | 2023 Mar 19 |
| Distinct value computations support rapid sequential decisions. | Mah, Andrew; Schiereck, Shannon S; Bossio, Veronica; Constantinople, Christine M | bioRxiv : the preprint server for biology | 36993514 | 2023 Aug 02 |
| Targeted DNA integration in human cells without double-strand breaks using CRISPR RNA-guided transposases. | Lampe, George D; King, Rebeca T; Halpin-Healy, Tyler S; Klompe, Sanne E; Hogan, Marcus I; Vo, Phuc Leo H; Tang, Stephen; Chavez, Alejandro; Sternberg, Samuel H | bioRxiv : the preprint server for biology | 36993517 | 2023 Mar 18 |
| Tuft cell-derived acetylcholine regulates epithelial fluid secretion. | Billipp, Tyler E; Fung, Connie; Webeck, Lily M; Sargent, Derek B; Gologorsky, Matthew B; McDaniel, Margaret M; Kasal, Darshan N; McGinty, John W; Barrow, Kaitlyn A; Rich, Lucille M; Barilli, Alessio; Sabat, Mark; Debley, Jason S; Myers, Richard; Howitt, Michael R; von Moltke, Jakob | bioRxiv : the preprint server for biology | 36993541 | 2023 Mar 22 |
| Bacterial genome engineering using CRISPR RNA-guided transposases. | Gelsinger, Diego R; Vo, Phuc Leo H; Klompe, Sanne E; Ronda, Carlotta; Wang, Harris; Sternberg, Samuel H | bioRxiv : the preprint server for biology | 36993567 | 2023 Mar 21 |
| Topography of inputs into the hippocampal formation of a food-caching bird. | Applegate, Marissa C; Gutnichenko, Konstantin S; Aronov, Dmitriy | bioRxiv : the preprint server for biology | 36993579 | 2023 Mar 15 |
| Immunogenetic metabolomics revealed key enzymes that modulate CAR-T metabolism and function. | Renauer, Paul; Park, Jonathan J; Bai, Meizhu; Acosta, Arianny; Lee, Won-Ho; Lin, Guang Han; Zhang, Yueqi; Dai, Xiaoyun; Wang, Guangchuan; Errami, Youssef; Wu, Terence; Clark, Paul; Ye, Lupeng; Yang, Quanjun; Chen, Sidi | bioRxiv : the preprint server for biology | 36993638 | 2023 Mar 15 |
| Sensory cortical ensembles exhibit differential coupling to ripples in distinct hippocampal subregions. | Jeong, Huijeong; Namboodiri, Vijay Mohan K; Jung, Min Whan; Andermann, Mark L | bioRxiv : the preprint server for biology | 36993665 | 2023 Mar 18 |
| Comparative landscape of genetic dependencies in human and chimpanzee stem cells. | She, Richard; Fair, Tyler; Schaefer, Nathan K; Saunders, Reuben A; Pavlovic, Bryan J; Weissman, Jonathan S; Pollen, Alex A | bioRxiv : the preprint server for biology | 36993685 | 2023 Mar 20 |
| Xiphoid nucleus of the midline thalamus controls cold-induced food seeking. | Lal, Neeraj K; Le, Phuong; Aggarwal, Samarth; Zhang, Alan; Wang, Kristina; Qi, Tianbo; Pang, Zhengyuan; Yang, Dong; Nudell, Victoria; Yeo, Gene W; Banks, Alexander S; Ye, Li | bioRxiv : the preprint server for biology | 36993706 | 2023 Mar 18 |
| Multiomic Analysis and CRISPR Perturbation Screens Identify Endothelial Cell Programs and Novel Therapeutic Targets for Coronary Artery Disease. | Gupta, Rajat M; Schnitzler, Gavin R; Fang, Shi; Lee-Kim, Vivian S; Barry, Aurelie | Arteriosclerosis, thrombosis, and vascular biology | 36994731 | 2023 May |
| Wide and deep neural networks achieve consistency for classification. | Radhakrishnan, Adityanarayanan; Belkin, Mikhail; Uhler, Caroline | Proceedings of the National Academy of Sciences of the United States of America | 36996114 | 2023 Apr 04 |
| Combinatorial design of nanoparticles for pulmonary mRNA delivery and genome editing. | Li, Bowen; Manan, Rajith Singh; Liang, Shun-Qing; Gordon, Akiva; Jiang, Allen; Varley, Andrew; Gao, Guangping; Langer, Robert; Xue, Wen; Anderson, Daniel | Nature biotechnology | 36997680 | 2023 Oct |
| NK-like CD8+ γδ T cells are expanded in persistent Mycobacterium tuberculosis infection. | Roy Chowdhury, Roshni; Valainis, John R; Dubey, Megha; von Boehmer, Lotta; Sola, Elsa; Wilhelmy, Julie; Guo, Jing; Kask, Oliver; Ohanyan, Mane; Sun, Meng; Huang, Huang; Huang, Xianxi; Nguyen, Patricia K; Scriba, Thomas J; Davis, Mark M; Bendall, Sean C; Chien, Yueh-Hsiu | Science immunology | 37000856 | 2023 Mar 31 |
| Anteromedial thalamus gates the selection and stabilization of long-term memories. | Toader, Andrew C; Regalado, Josue M; Li, Yan Ran; Terceros, Andrea; Yadav, Nakul; Kumar, Suraj; Satow, Sloane; Hollunder, Florian; Bonito-Oliva, Alessandra; Rajasethupathy, Priya | Cell | 37001501 | 2023 Mar 30 |
| Genetic architecture of human brain evolution. | Fair, Tyler; Pollen, Alex A | Current opinion in neurobiology | 37003107 | 2023 Jun |
| Heparan sulfate glycomimetics via iterative assembly of "clickable" disaccharides. | Yang, Cangjie; Deng, Yu; Wang, Yang; Xia, Chaoshuang; Mehta, Akul Y; Baker, Kelly J; Samal, Anuj; Booneimsri, Putthipong; Lertmaneedang, Chanthakarn; Hwang, Seung; Flynn, James P; Cao, Muqing; Liu, Chao; Zhu, Alec C; Cummings, Richard D; Lin, Cheng; Mohanty, Udayan; Niu, Jia | Chemical science | 37006675 | 2023 Mar 29 |
| Prioritized mass spectrometry increases the depth, sensitivity and data completeness of single-cell proteomics. | Huffman, R Gray; Leduc, Andrew; Wichmann, Christoph; Di Gioia, Marco; Borriello, Francesco; Specht, Harrison; Derks, Jason; Khan, Saad; Khoury, Luke; Emmott, Edward; Petelski, Aleksandra A; Perlman, David H; Cox, Jürgen; Zanoni, Ivan; Slavov, Nikolai | Nature methods | 37012480 | 2023 Apr 03 |
| Sensitivity optimization of a rhodopsin-based fluorescent voltage indicator. | Abdelfattah, Ahmed S; Zheng, Jihong; Singh, Amrita; Huang, Yi-Chieh; Reep, Daniel; Tsegaye, Getahun; Tsang, Arthur; Arthur, Benjamin J; Rehorova, Monika; Olson, Carl V L; Shuai, Yichun; Zhang, Lixia; Fu, Tian-Ming; Milkie, Daniel E; Moya, Maria V; Weber, Timothy D; Lemire, Andrew L; Baker, Christopher A; Falco, Natalie; Zheng, Qinsi; Grimm, Jonathan B; Yip, Mighten C; Walpita, Deepika; Chase, Martin; Campagnola, Luke; Murphy, Gabe J; Wong, Allan M; Forest, Craig R; Mertz, Jerome; Economo, Michael N; Turner, Glenn C; Koyama, Minoru; Lin, Bei-Jung; Betzig, Eric; Novak, Ondrej; Lavis, Luke D; Svoboda, Karel; Korff, Wyatt; Chen, Tsai-Wen; Schreiter, Eric R; Hasseman, Jeremy P; Kolb, Ilya | Neuron | 37015225 | 2023 May 17 |
| Conditional cross-design synthesis estimators for generalizability in Medicaid. | Degtiar, Irina; Layton, Tim; Wallace, Jacob; Rose, Sherri | Biometrics | 37018228 | 2023 Dec |
| Cardiac Adipose Tissue Segmentation via Image-Level Annotations. | Huang, Ziyi; Gan, Yu; Lye, Theresa; Liu, Yanchen; Zhang, Haofeng; Laine, Andrew; Angelini, Elsa; Hendon, Christine | IEEE journal of biomedical and health informatics | 37023157 | 2023 Jun |
| DNA double-strand break end synapsis by DNA loop extrusion. | Yang, Jin H; Brandão, Hugo B; Hansen, Anders S | Nature communications | 37024496 | 2023 Apr 06 |
| Dynamic antagonism between key repressive pathways maintains the placental epigenome. | Weigert, Raha; Hetzel, Sara; Bailly, Nina; Haggerty, Chuck; Ilik, Ibrahim A; Yung, Philip Yuk Kwong; Navarro, Carmen; Bolondi, Adriano; Kumar, Abhishek Sampath; Anania, Chiara; Brändl, Björn; Meierhofer, David; Lupiáñez, Darío G; Müller, Franz-Josef; Aktas, Tugce; Elsässer, Simon J; Kretzmer, Helene; Smith, Zachary D; Meissner, Alexander | Nature cell biology | 37024684 | 2023 Apr |
| Rate thresholds in cell signaling have functional and phenotypic consequences in non-linear time-dependent environments. | Thiemicke, Alexander; Neuert, Gregor | Frontiers in cell and developmental biology | 37025183 | 2023 |
| Single-Molecule Displacement Mapping Indicates Unhindered Intracellular Diffusion of Small (≲1 kDa) Solutes. | Choi, Alexander A; Xiang, Limin; Li, Wan; Xu, Ke | Journal of the American Chemical Society | 37027457 | 2023 Apr 07 |
| Systems biology approaches to unravel lymphocyte subsets and function. | Kim, YeEun; Greenleaf, William J; Bendall, Sean C | Current opinion in immunology | 37028221 | 2023 Jun |
| Structural and functional properties of mSWI/SNF chromatin remodeling complexes revealed through single-cell perturbation screens. | Otto, Jordan E; Ursu, Oana; Wu, Alexander P; Winter, Evan B; Cuoco, Michael S; Ma, Sai; Qian, Kristin; Michel, Brittany C; Buenrostro, Jason D; Berger, Bonnie; Regev, Aviv; Kadoch, Cigall | Molecular cell | 37028419 | 2023 Apr 20 |
| Long-term tolerance to skin commensals is established neonatally through a specialized dendritic cell subgroup. | Weckel, Antonin; Dhariwala, Miqdad O; Ly, Kevin; Tran, Victoria M; Ojewumi, Oluwasunmisola T; Riggs, Julianne B; Gonzalez, Jeanmarie R; Dwyer, Laura R; Okoro, Joy N; Leech, John M; Bacino, Margot S; Cho, Grace D; Merana, Geil; Anandasabapathy, Niroshana; Kumamoto, Yosuke; Scharschmidt, Tiffany C | Immunity | 37028427 | 2023 Jun 13 |
| Measuring Consciousness in the Intensive Care Unit. | Edlow, Brian L; Fecchio, Matteo; Bodien, Yelena G; Comanducci, Angela; Rosanova, Mario; Casarotto, Silvia; Young, Michael J; Li, Jian; Dougherty, Darin D; Koch, Christof; Tononi, Giulio; Massimini, Marcello; Boly, Melanie | Neurocritical care | 37029315 | 2023 Jun |
| Direct Thalamic Inputs to Hippocampal CA1 Transmit a Signal That Suppresses Ongoing Contextual Fear Memory Retrieval. | Ratigan, Heather C; Krishnan, Seetha; Smith, Shai; Sheffield, Mark E J | Research square | 37034716 | 2023 Mar 27 |
| Direct Thalamic Inputs to Hippocampal CA1 Transmit a Signal That Suppresses Ongoing Contextual Fear Memory Retrieval. | Ratigan, Heather C; Krishnan, Seetha; Smith, Shai; Sheffield, Mark E J | bioRxiv : the preprint server for biology | 37034812 | 2023 Mar 27 |
| Adverse Childhood Experiences Among Lesbian, Gay, Bisexual, and Queer Veterans. | Hahn, Hunter A; Blosnich, John R | American journal of preventive medicine | 37037327 | 2023 Oct |
| High-throughput identification of prefusion-stabilizing mutations in SARS-CoV-2 spike. | Tan, Timothy J C; Mou, Zongjun; Lei, Ruipeng; Ouyang, Wenhao O; Yuan, Meng; Song, Ge; Andrabi, Raiees; Wilson, Ian A; Kieffer, Collin; Dai, Xinghong; Matreyek, Kenneth A; Wu, Nicholas C | Nature communications | 37037866 | 2023 Apr 10 |
| Spatiotemporally resolved transcriptomics reveals the subcellular RNA kinetic landscape. | Ren, Jingyi; Zhou, Haowen; Zeng, Hu; Wang, Connie Kangni; Huang, Jiahao; Qiu, Xiaojie; Sui, Xin; Li, Qiang; Wu, Xunwei; Lin, Zuwan; Lo, Jennifer A; Maher, Kamal; He, Yichun; Tang, Xin; Lam, Judson; Chen, Hongyu; Li, Brian; Fisher, David E; Liu, Jia; Wang, Xiao | Nature methods | 37038000 | 2023 May |
| Circadian rhythm disruption linked to skeletal muscle dysfunction in the Mexican Cavefish. | Olsen, Luke; Krishnan, Jaya; Banks, Charles; Hassan, Huzaifa; Rohner, Nicolas | Current biology : CB | 37040703 | 2023 Apr 10 |
| Aberrant activation of TCL1A promotes stem cell expansion in clonal haematopoiesis. | Weinstock, Joshua S; Gopakumar, Jayakrishnan; Burugula, Bala Bharathi; Uddin, Md Mesbah; Jahn, Nikolaus; Belk, Julia A; Bouzid, Hind; Daniel, Bence; Miao, Zhuang; Ly, Nghi; Mack, Taralynn M; Luna, Sofia E; Prothro, Katherine P; Mitchell, Shaneice R; Laurie, Cecelia A; Broome, Jai G; Taylor, Kent D; Guo, Xiuqing; Sinner, Moritz F; von Falkenhausen, Aenne S; Kääb, Stefan; Shuldiner, Alan R; O'Connell, Jeffrey R; Lewis, Joshua P; Boerwinkle, Eric; Barnes, Kathleen C; Chami, Nathalie; Kenny, Eimear E; Loos, Ruth J F; Fornage, Myriam; Hou, Lifang; Lloyd-Jones, Donald M; Redline, Susan; Cade, Brian E; Psaty, Bruce M; Bis, Joshua C; Brody, Jennifer A; Silverman, Edwin K; Yun, Jeong H; Qiao, Dandi; Palmer, Nicholette D; Freedman, Barry I; Bowden, Donald W; Cho, Michael H; DeMeo, Dawn L; Vasan, Ramachandran S; Yanek, Lisa R; Becker, Lewis C; Kardia, Sharon L R; Peyser, Patricia A; He, Jiang; Rienstra, Michiel; Van der Harst, Pim; Kaplan, Robert; Heckbert, Susan R; Smith, Nicholas L; Wiggins, Kerri L; Arnett, Donna K; Irvin, Marguerite R; Tiwari, Hemant; Cutler, Michael J; Knight, Stacey; Muhlestein, J Brent; Correa, Adolfo; Raffield, Laura M; Gao, Yan; de Andrade, Mariza; Rotter, Jerome I; Rich, Stephen S; Tracy, Russell P; Konkle, Barbara A; Johnsen, Jill M; Wheeler, Marsha M; Smith, J Gustav; Melander, Olle; Nilsson, Peter M; Custer, Brian S; Duggirala, Ravindranath; Curran, Joanne E; Blangero, John; McGarvey, Stephen; Williams, L Keoki; Xiao, Shujie; Yang, Mao; Gu, C Charles; Chen, Yii-Der Ida; Lee, Wen-Jane; Marcus, Gregory M; Kane, John P; Pullinger, Clive R; Shoemaker, M Benjamin; Darbar, Dawood; Roden, Dan M; Albert, Christine; Kooperberg, Charles; Zhou, Ying; Manson, JoAnn E; Desai, Pinkal; Johnson, Andrew D; Mathias, Rasika A; NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium; Blackwell, Thomas W; Abecasis, Goncalo R; Smith, Albert V; Kang, Hyun M; Satpathy, Ansuman T; Natarajan, Pradeep; Kitzman, Jacob O; Whitsel, Eric A; Reiner, Alexander P; Bick, Alexander G; Jaiswal, Siddhartha | Nature | 37046083 | 2023 Apr |
| Clonal haematopoiesis and risk of chronic liver disease. | Wong, Waihay J; Emdin, Connor; Bick, Alexander G; Zekavat, Seyedeh M; Niroula, Abhishek; Pirruccello, James P; Dichtel, Laura; Griffin, Gabriel; Uddin, Md Mesbah; Gibson, Christopher J; Kovalcik, Veronica; Lin, Amy E; McConkey, Marie E; Vromman, Amelie; Sellar, Rob S; Kim, Peter G; Agrawal, Mridul; Weinstock, Joshua; Long, Michelle T; Yu, Bing; Banerjee, Rajarshi; Nicholls, Rowan C; Dennis, Andrea; Kelly, Matt; Loh, Po-Ru; McCarroll, Steve; Boerwinkle, Eric; Vasan, Ramachandran S; Jaiswal, Siddhartha; Johnson, Andrew D; Chung, Raymond T; Corey, Kathleen; Levy, Daniel; Ballantyne, Christie; NHLBI TOPMed Hematology Working Group; Ebert, Benjamin L; Natarajan, Pradeep | Nature | 37046084 | 2023 Apr |
| Noncoding translation mitigation. | Kesner, Jordan S; Chen, Ziheng; Shi, Peiguo; Aparicio, Alexis O; Murphy, Michael R; Guo, Yang; Trehan, Aditi; Lipponen, Jessica E; Recinos, Yocelyn; Myeku, Natura; Wu, Xuebing | Nature | 37046090 | 2023 May |
| The Evolution of Ketamine in Severe Pediatric Traumatic Brain Injury, From Contraband to Promising Neuroprotectant? | Kochanek, Patrick M; Herrmann, Jeremy R; Bleck, Thomas P | Critical care medicine | 37052437 | 2023 May 01 |
| InterLINCing Chromatin Organization and Mechanobiology in Laminopathies. | Shah, Parisha P; Santini, Garrett T; Shen, Kaitlyn M; Jain, Rajan | Current cardiology reports | 37052760 | 2023 Apr 13 |
| On-person adaptive evolution of Staphylococcus aureus during treatment for atopic dermatitis. | Key, Felix M; Khadka, Veda D; Romo-González, Carolina; Blake, Kimbria J; Deng, Liwen; Lynn, Tucker C; Lee, Jean C; Chiu, Isaac M; García-Romero, Maria T; Lieberman, Tami D | Cell host & microbe | 37054679 | 2023 Apr 12 |
| Stress exposure histories revealed by biochemical changes along accentuated lines in teeth. | Austin, Christine; Kumar, Piyush; Carter, Elizabeth A; Lee, Joonsup; Smith, Tanya M; Hinde, Katie; Arora, Manish; Lay, Peter A | Chemosphere | 37054846 | 2023 Jul |
| Engineered nanomaterials that exploit blood-brain barrier dysfunction for delivery to the brain. | Wu, Jason R; Hernandez, Yazmin; Miyasaki, Katelyn F; Kwon, Ester J | Advanced drug delivery reviews | 37054953 | 2023 Jun |
| Vibrio cholerae biofilms use modular adhesins with glycan-targeting and nonspecific surface binding domains for colonization. | Huang, Xin; Nero, Thomas; Weerasekera, Ranjuna; Matej, Katherine H; Hinbest, Alex; Jiang, Zhaowei; Lee, Rebecca F; Wu, Longjun; Chak, Cecilia; Nijjer, Japinder; Gibaldi, Isabella; Yang, Hang; Gamble, Nathan; Ng, Wai-Leung; Malaker, Stacy A; Sumigray, Kaelyn; Olson, Rich; Yan, Jing | Nature communications | 37055389 | 2023 Apr 13 |
| Nucleocytoplasmic transport of active HER2 causes fractional escape from the DCIS-like state. | Wang, Lixin; Paudel, B Bishal; McKnight, R Anthony; Janes, Kevin A | Nature communications | 37055441 | 2023 Apr 13 |
| Temporally resolved transcriptional recording in E. coli DNA using a Retro-Cascorder. | Lear, Sierra K; Lopez, Santiago C; González-Delgado, Alejandro; Bhattarai-Kline, Santi; Shipman, Seth L | Nature protocols | 37059915 | 2023 Jun |
| Sex-specific effects of chronic paternal stress on offspring development are partially mediated via mothers. | Mashoodh, Rahia; Habrylo, Ireneusz B; Gudsnuk, Kathryn; Champagne, Frances A | Hormones and behavior | 37062113 | 2023 Jun |
| High-throughput colocalization pipeline quantifies efficacy of mitochondrial targeting signals across different protein types. | Lear, Sierra K; Nunez, Jose A; Shipman, Seth L | bioRxiv : the preprint server for biology | 37066162 | 2023 Apr 03 |
| Keystone pathobionts associated with colorectal cancer promote oncogenic reprograming. | Jones, Josh; Shi, Qiaojuan; Nath, Rahul R; Brito, Ilana L | bioRxiv : the preprint server for biology | 37066368 | 2023 Apr 03 |
| Application of Flow Vermimetry for Quantification and Analysis of the Caenorhabditis elegans Gut Microbiome. | Zhang, Fan; Blackburn, Dana; Hosea, Ciara N; Assié, Adrien; Samuel, Buck S | Journal of visualized experiments : JoVE | 37067276 | 2023 Mar 31 |
| Genome-Wide Mapping of the Escherichia coli PhoB Regulon Reveals Many Transcriptionally Inert, Intragenic Binding Sites. | Fitzgerald, Devon M; Stringer, Anne M; Smith, Carol; Lapierre, Pascal; Wade, Joseph T | mBio | 37067422 | 2023 Jun 27 |
| Flow cytometric printing of double emulsions into open droplet arrays. | Zhang, Pengfei; Xu, Linfeng; Chen, Huawei; Abate, Adam R | Lab on a chip | 37070963 | 2023 May 16 |
| Computational Random Mutagenesis to Investigate RAS Mutant Signaling. | Stites, Edward C | Methods in molecular biology (Clifton, N.J.) | 37074586 | 2023 |
| An SPNS1-dependent lysosomal lipid transport pathway that enables cell survival under choline limitation. | Scharenberg, Samantha G; Dong, Wentao; Ghoochani, Ali; Nyame, Kwamina; Levin-Konigsberg, Roni; Krishnan, Aswini R; Rawat, Eshaan S; Spees, Kaitlyn; Bassik, Michael C; Abu-Remaileh, Monther | Science advances | 37075117 | 2023 Apr 21 |
| PI3Kβ controls immune evasion in PTEN-deficient breast tumours. | Bergholz, Johann S; Wang, Qiwei; Wang, Qi; Ramseier, Michelle; Prakadan, Sanjay; Wang, Weihua; Fang, Rong; Kabraji, Sheheryar; Zhou, Qian; Gray, G Kenneth; Abell-Hart, Kayley; Xie, Shaozhen; Guo, Xiaocan; Gu, Hao; Von, Thanh; Jiang, Tao; Tang, Shuang; Freeman, Gordon J; Kim, Hye-Jung; Shalek, Alex K; Roberts, Thomas M; Zhao, Jean J | Nature | 37076617 | 2023 May |
| Novel molecular requirements for CRISPR RNA-guided transposition. | Walker, Matt W G; Klompe, Sanne E; Zhang, Dennis J; Sternberg, Samuel H | Nucleic acids research | 37078593 | 2023 May 22 |
| Integrated Physiology of the Exocrine and Endocrine Compartments in Pancreatic Diseases: Workshop Proceedings. | Mastracci, Teresa L; Apte, Minoti; Amundadottir, Laufey T; Alvarsson, Alexandra; Artandi, Steven; Bellin, Melena D; Bernal-Mizrachi, Ernesto; Caicedo, Alejandro; Campbell-Thompson, Martha; Cruz-Monserrate, Zobeida; El Ouaamari, Abdelfattah; Gaulton, Kyle J; Geisz, Andrea; Goodarzi, Mark O; Hara, Manami; Hull-Meichle, Rebecca L; Kleger, Alexander; Klein, Alison P; Kopp, Janel L; Kulkarni, Rohit N; Muzumdar, Mandar D; Naren, Anjaparavanda P; Oakes, Scott A; Olesen, Søren S; Phelps, Edward A; Powers, Alvin C; Stabler, Cherie L; Tirkes, Temel; Whitcomb, David C; Yadav, Dhiraj; Yong, Jing; Zaghloul, Norann A; Sander, Maike; Pandol, Stephen J | Pancreas | 37078927 | 2022 Oct 01 |
| Transcriptional kinetic synergy: A complex landscape revealed by integrating modeling and synthetic biology. | Martinez-Corral, Rosa; Park, Minhee; Biette, Kelly M; Friedrich, Dhana; Scholes, Clarissa; Khalil, Ahmad S; Gunawardena, Jeremy; DePace, Angela H | Cell systems | 37080164 | 2023 Apr 19 |
| Multimodal charting of molecular and functional cell states via in situ electro-sequencing. | Li, Qiang; Lin, Zuwan; Liu, Ren; Tang, Xin; Huang, Jiahao; He, Yichun; Sui, Xin; Tian, Weiwen; Shen, Hao; Zhou, Haowen; Sheng, Hao; Shi, Hailing; Xiao, Ling; Wang, Xiao; Liu, Jia | Cell | 37080201 | 2023 Apr 27 |
| DOT1L promotes spermatid differentiation by regulating expression of genes required for histone-to-protamine replacement. | Malla, Aushaq B; Rainsford, Shannon R; Smith, Zachary D; Lesch, Bluma J | Development (Cambridge, England) | 37082969 | 2023 May 01 |
| Integration of silicon chip microstructures for in-line microbial cell lysis in soft microfluidics. | Nittala, Pavani Vamsi Krishna; Hohreiter, Allison; Rosas Linhard, Emilio; Dohn, Ryan; Mishra, Suryakant; Konda, Abhiteja; Divan, Ralu; Guha, Supratik; Basu, Anindita | Lab on a chip | 37083052 | 2023 May 02 |
| Validating agent-based simulation model of hospital-associated Clostridioides difficile infection using primary hospital data. | Scaria, Elizabeth; Safdar, Nasia; Alagoz, Oguzhan | PloS one | 37083629 | 2023 |
| MitoTNT: Mitochondrial Temporal Network Tracking for 4D live-cell fluorescence microscopy data. | Wang, Zichen; Natekar, Parth; Tea, Challana; Tamir, Sharon; Hakozaki, Hiroyuki; Schöneberg, Johannes | PLoS computational biology | 37083820 | 2023 Apr |
| A mixture model to estimate SARS-CoV-2 seroprevalence in Chennai, India. | Hitchings, Matt D T; Patel, Eshan U; Khan, Rifa; Srikrishnan, Aylur K; Anderson, Mark; Kumar, K S; Wesolowski, Amy P; Iqbal, Syed H; Rodgers, Mary A; Mehta, Shruti H; Cloherty, Gavin; Cummings, Derek A T; Solomon, Sunil S | American journal of epidemiology | 37084085 | 2023 Apr 21 |
| Microglia enable cross-modal plasticity by removing inhibitory synapses. | Hashimoto, Akari; Kawamura, Nanami; Tarusawa, Etsuko; Takeda, Ikuko; Aoyama, Yuki; Ohno, Nobuhiko; Inoue, Mio; Kagamiuchi, Mai; Kato, Daisuke; Matsumoto, Mami; Hasegawa, Yoshihiro; Nabekura, Junichi; Schaefer, Anne; Moorhouse, Andrew J; Yagi, Takeshi; Wake, Hiroaki | Cell reports | 37086724 | 2023 May 30 |
| A luciferase fragment complementation assay to detect focal adhesion kinase (FAK) signaling events. | Estep, Jason A; Sun, Lu O; Riccomagno, Martin M | Heliyon | 37089315 | 2023 Apr |
| Whole-brain mapping reveals the divergent impact of ketamine on the dopamine system. | Datta, Malika S; Chen, Yannan; Chauhan, Shradha; Zhang, Jing; De La Cruz, Estanislao Daniel; Gong, Cheng; Tomer, Raju | bioRxiv : the preprint server for biology | 37090584 | 2023 Apr 17 |
| Protective effect of pre-existing natural immunity in a nonhuman primate reinfection model of congenital cytomegalovirus infection. | Moström, Matilda; Yu, Shan; Tran, Dollnovan; Saccoccio, Frances; Versoza, Cyril J; Malouli, Daniel; Mirza, Anne; Valencia, Sarah; Gilbert, Margaret; Blair, Robert; Hansen, Scott; Barry, Peter; Früh, Klaus; Jensen, Jeffrey D; Pfeifer, Susanne P; Kowalik, Timothy F; Permar, Sallie R; Kaur, Amitinder | bioRxiv : the preprint server for biology | 37090643 | 2023 Apr 10 |
| Computational complexity drives sustained deliberation. | Hong, Tao; Stauffer, William R | Nature neuroscience | 37095398 | 2023 May |
| CHD-associated enhancers shape human cardiomyocyte lineage commitment. | Armendariz, Daniel A; Goetsch, Sean C; Sundarrajan, Anjana; Sivakumar, Sushama; Wang, Yihan; Xie, Shiqi; Munshi, Nikhil V; Hon, Gary C | eLife | 37096669 | 2023 Apr 25 |
| Self-Assembly of Hybrid Peptide-DNA Nanostructures using Homotrimeric Coiled-Coil/Nucleic Acid Building Blocks. | Buchberger, Alex; Al-Amin, Md; Simmons, Chad R; Stephanopoulos, Nicholas | Chembiochem : a European journal of chemical biology | 37099451 | 2023 Sep 01 |
| Context matters: Lessons in epithelial polarity from the Caenorhabditis elegans intestine and other tissues. | Naturale, Victor F; Pickett, Melissa A; Feldman, Jessica L | Current topics in developmental biology | 37100523 | 2023 |
| Viral sponges sequester nucleotide signals to inactivate immunity. | Richmond-Buccola, Desmond; Kranzusch, Philip J | Trends in microbiology | 37100632 | 2023 Jun |
| Three-dimensional genome rewiring in loci with human accelerated regions. | Keough, Kathleen C; Whalen, Sean; Inoue, Fumitaka; Przytycki, Pawel F; Fair, Tyler; Deng, Chengyu; Steyert, Marilyn; Ryu, Hane; Lindblad-Toh, Kerstin; Karlsson, Elinor; Zoonomia Consortium§; Nowakowski, Tomasz; Ahituv, Nadav; Pollen, Alex; Pollard, Kather | Science (New York, N.Y.) | 37104607 | 2023 Apr 28 |
| Cross-modal autoencoder framework learns holistic representations of cardiovascular state. | Radhakrishnan, Adityanarayanan; Friedman, Sam F; Khurshid, Shaan; Ng, Kenney; Batra, Puneet; Lubitz, Steven A; Philippakis, Anthony A; Uhler, Caroline | Nature communications | 37105979 | 2023 Apr 28 |
| Strategies for Improving Vascularization in Kidney Organoids: A Review of Current Trends. | Konoe, Ran; Morizane, Ryuji | Biology | 37106704 | 2023 Mar 26 |
| Quantitative analysis of autophagy reveals the role of ATG9 and ATG2 in autophagosome formation. | Broadbent, David G; Barnaba, Carlo; Perez, Gloria I; Schmidt, Jens C | The Journal of cell biology | 37115157 | 2023 Jul 03 |
| Lipid Nanoparticle Delivery of Small Proteins for Potent In Vivo RAS Inhibition. | Haley, Rebecca M; Chan, Alexander; Billingsley, Margaret M; Gong, Ningqiang; Padilla, Marshall S; Kim, Emily H; Wang, Hejia; Yin, Dingzi; Wangensteen, Kirk J; Tsourkas, Andrew; Mitchell, Michael J | ACS applied materials & interfaces | 37115558 | 2023 May 10 |
| California's Public Safety Realignment Act and prisoner mortality. | Rowe, Christopher L; Hubbard, Alan; Ahern, Jennifer | PloS one | 37115751 | 2023 |
| Erratum. Integrated Physiology of the Exocrine and Endocrine Compartments in Pancreatic Diseases: Workshop Proceedings. Diabetes 2023;72:433-448. | Mastracci, Teresa L; Apte, Minoti; Amundadottir, Laufey T; Alvarsson, Alexandra; Artandi, Steven; Bellin, Melena D; Bernal-Mizrachi, Ernesto; Caicedo, Alejandro; Campbell-Thompson, Martha; Cruz-Monserrate, Zobeida; Ouaamari, Abdelfattah El; Gaulton, Kyle J; Geisz, Andrea; Goodarzi, Mark O; Hara, Manami; Hull-Meichle, Rebecca L; Kleger, Alexander; Klein, Alison P; Kopp, Janel L; Kulkarni, Rohit N; Muzumdar, Mandar D; Naren, Anjaparavanda P; Oakes, Scott A; Olesen, Søren S; Phelps, Edward A; Powers, Alvin C; Stabler, Cherie L; Tirkes, Temel; Whitcomb, David C; Yadav, Dhiraj; Yong, Jing; Zaghloul, Norann A; Pandol, Stephen J; Sander, Maike | Diabetes | 37116182 | 2023 Aug 01 |
| Structural and functional basis of the universal transcription factor NusG pro-pausing activity in Mycobacterium tuberculosis. | Delbeau, Madeleine; Omollo, Expery O; Froom, Ruby; Koh, Steven; Mooney, Rachel A; Lilic, Mirjana; Brewer, Joshua J; Rock, Jeremy; Darst, Seth A; Campbell, Elizabeth A; Landick, Robert | Molecular cell | 37116494 | 2023 May 04 |
| Engineered Extracellular Vesicles Derived from Dermal Fibroblasts Attenuate Inflammation in a Murine Model of Acute Lung Injury. | Salazar-Puerta, Ana I; Rincon-Benavides, María A; Cuellar-Gaviria, Tatiana Z; Aldana, Julian; Vasquez Martinez, Gabriela; Ortega-Pineda, Lilibeth; Das, Devleena; Dodd, Daniel; Spencer, Charles A; Deng, Binbin; McComb, David W; Englert, Joshua A; Ghadiali, Samir; Zepeda-Orozco, Diana; Wold, Loren E; Gallego-Perez, Daniel; Higuita-Castro, Natalia | Advanced materials (Deerfield Beach, Fla.) | 37119468 | 2023 Jul |
| Toward the Next Frontiers of Vibrational Bioimaging. | Wang, Haomin; Lee, Dongkwan; Wei, Lu | Chemical & biomedical imaging | 37122829 | 2023 Apr 24 |
| Contribution of Somatic Ras/Raf/Mitogen-Activated Protein Kinase Variants in the Hippocampus in Drug-Resistant Mesial Temporal Lobe Epilepsy. | Khoshkhoo, Sattar; Wang, Yilan; Chahine, Yasmine; Erson-Omay, E Zeynep; Robert, Stephanie M; Kiziltug, Emre; Damisah, Eyiyemisi C; Nelson-Williams, Carol; Zhu, Guangya; Kong, Wenna; Huang, August Yue; Stronge, Edward; Phillips, H Westley; Chhouk, Brian H; Bizzotto, Sara; Chen, Ming Hui; Adikari, Thiuni N; Ye, Zimeng; Witkowski, Tom; Lai, Dulcie; Lee, Nadine; Lokan, Julie; Scheffer, Ingrid E; Berkovic, Samuel F; Haider, Shozeb; Hildebrand, Michael S; Yang, Edward; Gunel, Murat; Lifton, Richard P; Richardson, R Mark; Blümcke, Ingmar; Alexandrescu, Sanda; Huttner, Anita; Heinzen, Erin L; Zhu, Jidong; Poduri, Annapurna; DeLanerolle, Nihal; Spencer, Dennis D; Lee, Eunjung Alice; Walsh, Christopher A; Kahle, Kristopher T | JAMA neurology | 37126322 | 2023 Jun 01 |
| The genetic determinants of recurrent somatic mutations in 43,693 blood genomes. | Weinstock, Joshua S; Laurie, Cecelia A; Broome, Jai G; Taylor, Kent D; Guo, Xiuqing; Shuldiner, Alan R; O'Connell, Jeffrey R; Lewis, Joshua P; Boerwinkle, Eric; Barnes, Kathleen C; Chami, Nathalie; Kenny, Eimear E; Loos, Ruth J F; Fornage, Myriam; Redline, Susan; Cade, Brian E; Gilliland, Frank D; Chen, Zhanghua; Gauderman, W James; Kumar, Rajesh; Grammer, Leslie; Schleimer, Robert P; Psaty, Bruce M; Bis, Joshua C; Brody, Jennifer A; Silverman, Edwin K; Yun, Jeong H; Qiao, Dandi; Weiss, Scott T; Lasky-Su, Jessica; DeMeo, Dawn L; Palmer, Nicholette D; Freedman, Barry I; Bowden, Donald W; Cho, Michael H; Vasan, Ramachandran S; Johnson, Andrew D; Yanek, Lisa R; Becker, Lewis C; Kardia, Sharon; He, Jiang; Kaplan, Robert; Heckbert, Susan R; Smith, Nicholas L; Wiggins, Kerri L; Arnett, Donna K; Irvin, Marguerite R; Tiwari, Hemant; Correa, Adolfo; Raffield, Laura M; Gao, Yan; de Andrade, Mariza; Rotter, Jerome I; Rich, Stephen S; Manichaikul, Ani W; Konkle, Barbara A; Johnsen, Jill M; Wheeler, Marsha M; Custer, Brian S; Duggirala, Ravindranath; Curran, Joanne E; Blangero, John; Gui, Hongsheng; Xiao, Shujie; Williams, L Keoki; Meyers, Deborah A; Li, Xingnan; Ortega, Victor; McGarvey, Stephen; Gu, C Charles; Chen, Yii-Der Ida; Lee, Wen-Jane; Shoemaker, M Benjamin; Darbar, Dawood; Roden, Dan; Albert, Christine; Kooperberg, Charles; Desai, Pinkal; Blackwell, Thomas W; Abecasis, Goncalo R; Smith, Albert V; Kang, Hyun M; Mathias, Rasika; Natarajan, Pradeep; Jaiswal, Siddhartha; Reiner, Alexander P; Bick, Alexander G; NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium | Science advances | 37126548 | 2023 Apr 28 |
| Mechanosensation to inflammation: Roles for YAP/TAZ in innate immune cells. | Meli, Vijaykumar S; Veerasubramanian, Praveen Krishna; Downing, Timothy L; Wang, Wenqi; Liu, Wendy F | Science signaling | 37130167 | 2023 May 02 |
| A DRG genetic toolkit reveals molecular, morphological, and functional diversity of somatosensory neuron subtypes. | Qi, Lijun; Iskols, Michael; Shi, David; Reddy, Pranav; Walker, Christopher; Lezgiyeva, Karina; Voisin, Tiphaine; Pawlak, Mathias; Kuchroo, Vijay K; Chiu, Isaac; Ginty, David D; Sharma, Nikhil | bioRxiv : the preprint server for biology | 37131664 | 2023 Apr 23 |
| Structure and assembly of a bacterial gasdermin pore. | Johnson, Alex G; Mayer, Megan L; Schaefer, Stefan L; McNamara-Bordewick, Nora K; Hummer, Gerhard; Kranzusch, Philip J | bioRxiv : the preprint server for biology | 37131678 | 2023 Oct 26 |
| Conserved enhancer logic controls the notochord expression of vertebrate Brachyury. | Kemmler, Cassie L; Smolikova, Jana; Moran, Hannah R; Mannion, Brandon J; Knapp, Dunja; Lim, Fabian; Czarkwiani, Anna; Hermosilla Aguayo, Viviana; Rapp, Vincent; Fitch, Olivia E; Bötschi, Seraina; Selleri, Licia; Farley, Emma; Braasch, Ingo; Yun, Maximina; Visel, Axel; Osterwalder, Marco; Mosimann, Christian; Kozmik, Zbynek; Burger, Alexa | bioRxiv : the preprint server for biology | 37131681 | 2023 Apr 20 |
| Targeting Sex Determination to Suppress Mosquito Populations. | Li, Ming; Kandul, Nikolay P; Sun, Ruichen; Yang, Ting; Benetta, Elena D; Brogan, Daniel J; Antoshechkin, Igor; Sánchez C, Héctor M; Zhan, Yinpeng; DeBeaubien, Nicolas A; Loh, YuMin M; Su, Matthew P; Montell, Craig; Marshall, John M; Akbari, Omar S | bioRxiv : the preprint server for biology | 37131747 | 2023 Nov 15 |
| Relationship of maternal cytomegalovirus-specific antibody responses and viral load to vertical transmission risk following primary maternal infection in a rhesus macaque model. | Otero, Claire E; Barfield, Richard; Scheef, Elizabeth; Nelson, Cody S; Rodgers, Nicole; Wang, Hsuan-Yuan; Moström, Matilda J; Manuel, Tabitha D; Sass, Julian; Schmidt, Kimberli; Taher, Husam; Papen, Courtney; Sprehe, Lesli; Kendall, Savannah; Davalos, Angel; Barry, Peter A; Früh, Klaus; Pollara, Justin; Malouli, Daniel; Chan, Cliburn; Kaur, Amitinder; Permar, Sallie R | bioRxiv : the preprint server for biology | 37131785 | 2023 Apr 21 |
| A qualitative exploration of the eight dimensions of wellness in opioid use disorder recovery during the postpartum period. | Mallahan, Stephanie; Armin, Julie; Bueno, Yvonne; Huff, Allison; Allen, Alicia | Drug and alcohol dependence reports | 37131999 | 2023 Jun |
| Single-cell intracellular pH dynamics regulate the cell cycle by timing the G1 exit and G2 transition. | Spear, Julia S; White, Katharine A | Journal of cell science | 37133398 | 2023 May 15 |
| A systematic review of extended reality (XR) for understanding and augmenting vision loss. | Kasowski, Justin; Johnson, Byron A; Neydavood, Ryan; Akkaraju, Anvitha; Beyeler, Michael | Journal of vision | 37140911 | 2023 May 02 |
| Discovery of target genes and pathways at GWAS loci by pooled single-cell CRISPR screens. | Morris, John A; Caragine, Christina; Daniloski, Zharko; Domingo, Júlia; Barry, Timothy; Lu, Lu; Davis, Kyrie; Ziosi, Marcello; Glinos, Dafni A; Hao, Stephanie; Mimitou, Eleni P; Smibert, Peter; Roeder, Kathryn; Katsevich, Eugene; Lappalainen, Tuuli; Sanjana, Neville E | Science (New York, N.Y.) | 37141313 | 2023 May 19 |
| Large scale sequence alignment via efficient inference in generative models. | Mongia, Mihir; Shen, Chengze; Davoodi, Arash Gholami; Marçais, Guillaume; Mohimani, Hosein | Scientific reports | 37142645 | 2023 May 04 |
| A human model of asthma exacerbation reveals transcriptional programs and cell circuits specific to allergic asthma. | Alladina, Jehan; Smith, Neal P; Kooistra, Tristan; Slowikowski, Kamil; Kernin, Isabela J; Deguine, Jacques; Keen, Henry L; Manakongtreecheep, Kasidet; Tantivit, Jessica; Rahimi, Rod A; Sheng, Susan L; Nguyen, Nhan D; Haring, Alexis M; Giacona, Francesca L; Hariri, Lida P; Xavier, Ramnik J; Luster, Andrew D; Villani, Alexandra-Chloé; Cho, Josalyn L; Medoff, Benjamin D | Science immunology | 37146132 | 2023 May 12 |
| Loop stacking organizes genome folding from TADs to chromosomes. | Hafner, Antonina; Park, Minhee; Berger, Scott E; Murphy, Sedona E; Nora, Elphège P; Boettiger, Alistair N | Molecular cell | 37146570 | 2023 May 04 |
| Deriving Schwann cells from hPSCs enables disease modeling and drug discovery for diabetic peripheral neuropathy. | Majd, Homa; Amin, Sadaf; Ghazizadeh, Zaniar; Cesiulis, Andrius; Arroyo, Edgardo; Lankford, Karen; Majd, Alireza; Farahvashi, Sina; Chemel, Angeline K; Okoye, Mesomachukwu; Scantlen, Megan D; Tchieu, Jason; Calder, Elizabeth L; Le Rouzic, Valerie; Shibata, Bradley; Arab, Abolfazl; Goodarzi, Hani; Pasternak, Gavril; Kocsis, Jeffery D; Chen, Shuibing; Studer, Lorenz; Fattahi, Faranak | Cell stem cell | 37146583 | 2023 May 04 |
| Vangl-dependent Wnt/planar cell polarity signaling mediates collective breast carcinoma motility and distant metastasis. | VanderVorst, Kacey; Dreyer, Courtney A; Hatakeyama, Jason; Bell, George R R; Learn, Julie A; Berg, Anastasia L; Hernandez, Maria; Lee, Hyun; Collins, Sean R; Carraway 3rd, Kermit L | Breast cancer research : BCR | 37147680 | 2023 May 05 |
| Discovery of the Azaserine Biosynthetic Pathway Uncovers a Biological Route for α-Diazoester Production. | Van Cura, Devon; Ng, Tai L; Huang, Jing; Hager, Harry; Hartwig, John F; Keasling, Jay D; Balskus, Emily P | Angewandte Chemie (International ed. in English) | 37151182 | 2023 Jul 10 |
| Targeted Enzyme Activity Imaging with Quantitative Phase Microscopy. | Tanwar, Swati; Wu, Lintong; Zahn, Noah; Raj, Piyush; Ghaemi, Behnaz; Chatterjee, Arnab; Bulte, Jeff W M; Barman, Ishan | Nano letters | 37154678 | 2023 May 24 |
| Golgi-IP, a tool for multimodal analysis of Golgi molecular content. | Fasimoye, Rotimi; Dong, Wentao; Nirujogi, Raja S; Rawat, Eshaan S; Iguchi, Miharu; Nyame, Kwamina; Phung, Toan K; Bagnoli, Enrico; Prescott, Alan R; Alessi, Dario R; Abu-Remaileh, Monther | Proceedings of the National Academy of Sciences of the United States of America | 37155866 | 2023 May 16 |
| TRAF4-mediated nonproteolytic ubiquitination of androgen receptor promotes castration-resistant prostate cancer. | Singh, Ramesh; Meng, Huan; Shen, Tao; Lumahan, Lance Edward V; Nguyen, Steven; Shen, Hong; Dasgupta, Subhamoy; Qin, Li; Karri, Dileep; Zhu, Bokai; Yang, Feng; Coarfa, Cristian; O'Malley, Bert W; Yi, Ping | Proceedings of the National Academy of Sciences of the United States of America | 37155905 | 2023 May 16 |
| The peritumor microenvironment: physics and immunity. | Zhang, Sue; Regan, Kathryn; Najera, Julian; Grinstaff, Mark W; Datta, Meenal; Nia, Hadi T | Trends in cancer | 37156677 | 2023 Aug |
| Region Capture Micro-C reveals coalescence of enhancers and promoters into nested microcompartments. | Goel, Viraat Y; Huseyin, Miles K; Hansen, Anders S | Nature genetics | 37157000 | 2023 Jun |
| Emerging Time-Resolved X-Ray Diffraction Approaches for Protein Dynamics. | Hekstra, Doeke R | Annual review of biophysics | 37159292 | 2023 May 09 |
| Bacterial NLR-related proteins protect against phage. | Kibby, Emily M; Conte, Amy N; Burroughs, A Maxwell; Nagy, Toni A; Vargas, Jose A; Whalen, Lindsay A; Aravind, L; Whiteley, Aaron T | Cell | 37160116 | 2023 May 25 |
| Tiered sympathetic control of cardiac function revealed by viral tracing and single cell transcriptome profiling. | Sharma, Sachin; Littman, Russell; Tompkins, John D; Arneson, Douglas; Contreras, Jaime; Dajani, Al-Hassan; Ang, Kaitlyn; Tsanhani, Amit; Sun, Xin; Jay, Patrick Y; Herzog, Herbert; Yang, Xia; Ajijola, Olujimi A | eLife | 37162194 | 2023 May 10 |
| Targeting Sex Determination to Suppress Mosquito Populations. | Akbari, Omar; Li, Ming; Kandul, Nikolay; Sun, Ruichen; Yang, Ting; Dalla Benetta, Elena; Brogan, Daniel; Antoshechkin, Igor; Sánchez C, Héctor; Zhan, Yin Peng; DeBeaubien, Nicolas; Loh, YuMin; Su, Matthew; Montell, Craig; Marshall, John | Research square | 37162925 | 2023 Apr 24 |
| A vast evolutionarily transient translatome contributes to phenotype and fitness. | Wacholder, Aaron; Parikh, Saurin Bipin; Coelho, Nelson Castilho; Acar, Omer; Houghton, Carly; Chou, Lin; Carvunis, Anne-Ruxandra | Cell systems | 37164009 | 2023 May 17 |
| Integration of a multi-omics stem cell differentiation dataset using a dynamical model. | van den Berg, Patrick R; Bérenger-Currias, Noémie M L P; Budnik, Bogdan; Slavov, Nikolai; Semrau, Stefan | PLoS genetics | 37167320 | 2023 May |
| A Neuromorphic Brain Interface based on RRAM Crossbar Arrays for High Throughput Real-time Spike Sorting. | Shi, Yuhan; Ananthakrishnan, Akshay; Oh, Sangheon; Liu, Xin; Hota, Gopabandhu; Cauwenberghs, Gert; Kuzum, Duygu | IEEE transactions on electron devices | 37168652 | 2022 Apr |
| Arousal and Locomotion Differently Modulate Activity of Somatostatin Neurons across Cortex. | Khoury, Christine F; Fala, Noelle G; Runyan, Caroline A | eNeuro | 37169583 | 2023 May |
| Task-specific modulation of corticospinal neuron activity during motor learning in mice. | Serradj, Najet; Marino, Francesca; Moreno-López, Yunuen; Bernstein, Amanda; Agger, Sydney; Soliman, Marwa; Sloan, Andrew; Hollis, Edmund | Nature communications | 37169765 | 2023 May 11 |
| A CRISPR-engineered isogenic model of the 22q11.2 A-B syndromic deletion. | Paranjape, Neha; Lin, Yu-Hsiu T; Flores-Ramirez, Quetzal; Sarin, Vishesh; Johnson, Amanda Brooke; Chu, Julia; Paredes, Mercedes; Wiita, Arun P | Scientific reports | 37169815 | 2023 May 11 |
| Clonal haematopoiesis and atherosclerotic cardiovascular disease. | Ahmad, Herra; Jaiswal, Siddhartha | Nature reviews. Cardiology | 37169832 | 2023 Jul |
| Comparative analysis of cell-cell communication at single-cell resolution. | Wilk, Aaron J; Shalek, Alex K; Holmes, Susan; Blish, Catherine A | Nature biotechnology | 37169965 | 2023 May 11 |
| Genetic mapping reveals Pou2af2/OCA-T1-dependent tuning of tuft cell differentiation and intestinal type 2 immunity. | Nadjsombati, Marija S; Niepoth, Natalie; Webeck, Lily M; Kennedy, Elizabeth A; Jones, Danielle L; Billipp, Tyler E; Baldridge, Megan T; Bendesky, Andres; von Moltke, Jakob | Science immunology | 37172102 | 2023 May 12 |
| A gut-secreted peptide suppresses arousability from sleep. | Titos, Iris; Juginović, Alen; Vaccaro, Alexandra; Nambara, Keishi; Gorelik, Pavel; Mazor, Ofer; Rogulja, Dragana | Cell | 37172567 | 2023 May 11 |
| Effects of antibiotic interaction on antimicrobial resistance development in wastewater. | Sutradhar, Indorica; Ching, Carly; Desai, Darash; Heins, Zachary; Khalil, Ahmad S; Zaman, Muhammad H | Scientific reports | 37179426 | 2023 May 13 |
| PhAT: A Flexible Open-Source GUI-Driven Toolkit for Photometry Analysis. | Murphy, Kathleen Z; Haile, Eyobel D; McTigue, Anna D; Pierce, Anne F; Donaldson, Zoe R | Current protocols | 37184156 | 2023 May |
| Non-Perturbative Identification and Subtyping of Amyloidosis in Human Kidney Tissue with Raman Spectroscopy and Machine Learning. | Kim, Jeong Hee; Zhang, Chi; Sperati, Christopher John; Bagnasco, Serena M; Barman, Ishan | Biosensors | 37185541 | 2023 Apr 08 |
| Rational Design of Nanomedicine for Placental Disorders: Birthing a New Era in Women's Reproductive Health. | Geisler, Hannah C; Safford, Hannah C; Mitchell, Michael J | Small (Weinheim an der Bergstrasse, Germany) | 37191231 | 2023 May 16 |
| Consistently estimating network statistics using aggregated relational data. | Breza, Emily; Chandrasekhar, Arun G; Lubold, Shane; McCormick, Tyler H; Pan, Mengjie | Proceedings of the National Academy of Sciences of the United States of America | 37192169 | 2023 May 23 |
| Systematic identification of anticancer drug targets reveals a nucleus-to-mitochondria ROS-sensing pathway. | Zhang, Junbing; Simpson, Claire M; Berner, Jacqueline; Chong, Harrison B; Fang, Jiafeng; Ordulu, Zehra; Weiss-Sadan, Tommy; Possemato, Anthony P; Harry, Stefan; Takahashi, Mariko; Yang, Tzu-Yi; Richter, Marianne; Patel, Himani; Smith, Abby E; Carlin, Alexander D; Hubertus de Groot, Adriaan F; Wolf, Konstantin; Shi, Lei; Wei, Ting-Yu; Dürr, Benedikt R; Chen, Nicholas J; Vornbäumen, Tristan; Wichmann, Nina O; Mahamdeh, Mohammed S; Pooladanda, Venkatesh; Matoba, Yusuke; Kumar, Shaan; Kim, Eugene; Bouberhan, Sara; Oliva, Esther; Rueda, Bo R; Soberman, Roy J; Bardeesy, Nabeel; Liau, Brian B; Lawrence, Michael; Stokes, Matt P; Beausoleil, Sean A; Bar-Peled, Liron | Cell | 37192619 | 2023 May 25 |
| Systematic d-Amino Acid Substitutions to Control Peptide and Hydrogel Degradation in Cellular Microenvironments. | Bomb, Kartik; Zhang, Qi; Ford, Eden M; Fromen, Catherine A; Kloxin, April M | ACS macro letters | 37195203 | 2023 Jun 20 |
| Ultrashort time-to-echo MR morphology of cartilaginous endplate correlates with disc degeneration in the lumbar spine. | Finkenstaedt, Tim; Siriwananrangsun, Palanan; Masuda, Koichi; Bydder, Graeme M; Chen, Karen C; Bae, Won C | European spine journal : official publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society | 37195362 | 2023 Jul |
| Testing a Novel Deliberate Practice Intervention to Improve Diagnostic Reasoning in Trauma Triage: A Pilot Randomized Clinical Trial. | Mohan, Deepika; Elmer, Jonathan; Arnold, Robert M; Forsythe, Raquel M; Fischhoff, Baruch; Rak, Kimberly; Barnes, Jaqueline L; White, Douglas B | JAMA network open | 37195666 | 2023 May 01 |
| The brain's dark transcriptome: Sequencing RNA in distal compartments of neurons and glia. | Ament, Seth A; Poulopoulos, Alexandros | Current opinion in neurobiology | 37196598 | 2023 Aug |
| Clonal Hematopoiesis of Indeterminate Potential Predicts Adverse Outcomes in Patients With Atherosclerotic Cardiovascular Disease. | Gumuser, Esra D; Schuermans, Art; Cho, So Mi Jemma; Sporn, Zachary A; Uddin, Md Mesbah; Paruchuri, Kaavya; Nakao, Tetsushi; Yu, Zhi; Haidermota, Sara; Hornsby, Whitney; Weeks, Lachelle D; Niroula, Abhishek; Jaiswal, Siddhartha; Libby, Peter; Ebert, Benjamin L; Bick, Alexander G; Natarajan, Pradeep; Honigberg, Michael C | Journal of the American College of Cardiology | 37197843 | 2023 May 23 |
| Elucidating the molecular programming of a nonlinear non-ribosomal peptide synthetase responsible for fungal siderophore biosynthesis. | Jenner, Matthew; Hai, Yang; Nguyen, Hong H; Passmore, Munro; Skyrud, Will; Kim, Junyong; Garg, Neil K; Zhang, Wenjun; Ogorzalek Loo, Rachel R; Tang, Yi | Nature communications | 37198174 | 2023 May 17 |
| Dynamically crosslinked thermoresponsive granular hydrogels. | Lee, Hung-Pang; Cai, Kathy Xiao; Wang, Ting-Ching; Davis Jr, Ryan; Deo, Kaivalya; Singh, Kanwar Abhay; Lele, Tanmay P; Gaharwar, Akhilesh K | Journal of biomedical materials research. Part A | 37199446 | 2023 May 18 |
| A selectivity filter in the ER membrane protein complex limits protein misinsertion at the ER. | Pleiner, Tino; Hazu, Masami; Pinton Tomaleri, Giovani; Nguyen, Vy N; Januszyk, Kurt; Voorhees, Rebecca M | The Journal of cell biology | 37199759 | 2023 Aug 07 |
| Pseudomonas virulence factor controls expression of virulence genes in Pseudomonas entomophila. | Acken, Katie A; Li, Bo | PloS one | 37200397 | 2023 |
| Insights into the mechanism of oligodendrocyte protection and remyelination enhancement by the integrated stress response. | Chen, Yanan; Quan, Songhua; Patil, Vaibhav; Kunjamma, Rejani B; Tokars, Haley M; Leisten, Eric D; Joy, Godwin; Wills, Samantha; Chan, Jonah R; Wong, Yvette C; Popko, Brian | Glia | 37203250 | 2023 May 19 |
| Calcium-triggered DNA-mediated membrane fusion in synthetic cells. | Hsu, Yen-Yu; Samuel, J Chen; Bernal-Chanchavac, Julio; Sharma, Bineet; Moghimianavval, Hossein; Stephanopoulos, Nicholas; Liu, Allen P | bioRxiv : the preprint server for biology | 37205334 | 2023 Jun 02 |
| Preservation of ∼12-hour ultradian rhythms of gene expression of mRNA and protein metabolism in the absence of canonical circadian clock. | Zhu, Bokai; Liu, Silvia | bioRxiv : the preprint server for biology | 37205336 | 2023 May 02 |
| Evidence for conservation of a primordial 12-hour ultradian gene program in humans. | Zhu, Bokai; Liu, Silvia; David, Natalie L; Dion, William; Doshi, Nandini K; Siegel, Lauren B; Amorim, Tânia; Andrews, Rosemary E; Kumar, Gv Naveen; Irfan, Saad; Pesaresi, Tristan; Sharma, Ankit X; Sun, Michelle; Fazeli, Pouneh K; Steinhauser, Matthew L | bioRxiv : the preprint server for biology | 37205600 | 2023 May 02 |
| Genetically engineered pair of cells for serological testing and its application for SARS-CoV-2. | Ssemadaali, Marvin A; Arredondo, Juan; Buser, Elise A; Newmyer, Sherri; Radhakrishnan, Harikrishnan; Javitz, Harold S; Dandekar, Satya; Bhatnagar, Parijat | Bioengineering & translational medicine | 37206248 | 2023 May |
| Solar Photocatalytic Phenol Polymerization and Hydrogen Generation for Flocculation of Wastewater Impurities. | Hafenstine, Glenn R; Patalano, Ryan E; Harris, Alexander W; Jiang, Grace; Ma, Ke; Goodwin, Andrew P; Cha, Jennifer N | ACS applied polymer materials | 37206614 | 2019 Jun 14 |
| Optical diffraction tomography and Raman spectroscopy reveal distinct cellular phenotypes during white and brown adipocyte differentiation. | Anantha, Pooja; Liu, Zhenhui; Raj, Piyush; Barman, Ishan | Biosensors & bioelectronics | 37207582 | 2023 Sep 01 |
| Membrane compression by synaptic vesicle exocytosis triggers ultrafast endocytosis. | Ogunmowo, Tyler H; Jing, Haoyuan; Raychaudhuri, Sumana; Kusick, Grant F; Imoto, Yuuta; Li, Shuo; Itoh, Kie; Ma, Ye; Jafri, Haani; Dalva, Matthew B; Chapman, Edwin R; Ha, Taekjip; Watanabe, Shigeki; Liu, Jian | Nature communications | 37210439 | 2023 May 20 |
| Dysregulation of amino acid metabolism upon rapid depletion of cap-binding protein eIF4E. | Diamond, Paige D; McGlincy, Nicholas J; Ingolia, Nicholas T | bioRxiv : the preprint server for biology | 37214807 | 2023 May 12 |
| Discovery and Validation of Context-Dependent Synthetic Mammalian Promoters. | Zahm, Adam M; Owens, William S; Himes, Samuel R; Rondem, Kathleen E; Fallon, Braden S; Gormick, Alexa N; Bloom, Joshua S; Kosuri, Sriram; Chan, Henry; English, Justin G | bioRxiv : the preprint server for biology | 37214829 | 2023 May 11 |
| A ubiquitous GC content signature underlies multimodal mRNA regulation by DDX3X. | Jowhar, Ziad; Xu, Albert; Venkataramanan, Srivats; Dossena, Francesco; Hoye, Mariah L; Silver, Debra L; Floor, Stephen N; Calviello, Lorenzo | bioRxiv : the preprint server for biology | 37214951 | 2023 Nov 23 |
| Development and characterization of nanobodies that specifically target the oncogenic Phosphatase of Regenerating Liver-3 (PRL-3) and impact its interaction with a known binding partner, CNNM3. | Smith, Caroline N; Kihn, Kyle; Williamson, Zachary A; Chow, K Martin; Hersh, Louis B; Korotkov, Konstantin V; Deredge, Daniel; Blackburn, Jessica S | PloS one | 37220097 | 2023 |
| Stimulation-mediated reverse engineering of silent neural networks. | Ren, Xiaoxuan; Bok, Ilhan; Vareberg, Adam; Hai, Aviad | Journal of neurophysiology | 37222450 | 2023 Jun 01 |
| Heat shock factor 1 (HSF1) specifically potentiates c-MYC-mediated transcription independently of the canonical heat shock response. | Xu, Meng; Lin, Ling; Ram, Babul Moni; Shriwas, Omprakash; Chuang, Kun-Han; Dai, Siyuan; Su, Kuo-Hui; Tang, Zijian; Dai, Chengkai | Cell reports | 37224019 | 2023 Jun 27 |
| APOL1 channel blocker reduces proteinuria in FSGS. | Olabisi, Opeyemi A | Kidney international | 37224918 | 2023 Aug |
| Computational Design of Molecular Probes for Electronic Preresonance Raman Scattering Microscopy. | Du, Jiajun; Tao, Xuecheng; Begušić, Tomislav; Wei, Lu | The journal of physical chemistry. B | 37226966 | 2023 Jun 08 |
| Real-Time Visualization of Microtubule and Protofilament-Scale Dynamics in Multi-Microtubule Arrays by Atomic Force Microscopy. | Wijeratne, Sithara S; Subramanian, Radhika | Current protocols | 37227098 | 2023 May |
| Tenascin-C Activation of Lung Fibroblasts in a 3D Synthetic Lung Extracellular Matrix Mimic. | Kundu, Aritra Nath; Dougan, Carey E; Mahmoud, Samar; Kilic, Alara; Panagiotou, Alexi; Richbourg, Nathan R; Irakoze, Ninette; Peyton, Shelly R | Advanced materials (Deerfield Beach, Fla.) | 37227134 | 2023 Aug |
| Emerging frontiers in regenerative medicine. | McKinley, Kara L; Longaker, Michael T; Naik, Shruti | Science (New York, N.Y.) | 37228215 | 2023 May 26 |
| Cardiovascular Brain Circuits. | Mohanta, Sarajo K; Yin, Changjun; Weber, Christian; Godinho-Silva, Cristina; Veiga-Fernandes, Henrique; Xu, Qian J; Chang, Rui B; Habenicht, Andreas J R | Circulation research | 37228235 | 2023 May 26 |
| Temporal frames, temporal focus, and behavioral expectations: The persuasive impact of near and distant threats. | Pokharel, Manusheela; Jensen, Jakob D; Taylor-Burton, Sophia; King, Andy J; John, Kevin K; Upshaw, Sean | Social science & medicine (1982) | 37229932 | 2023 Jul |
| Surveying the global landscape of post-transcriptional regulators. | Reynaud, Kendra; McGeachy, Anna M; Noble, David; Meacham, Zuriah A; Ingolia, Nicholas T | Nature structural & molecular biology | 37231154 | 2023 Jun |
| Dictionary learning for integrative, multimodal and scalable single-cell analysis. | Hao, Yuhan; Stuart, Tim; Kowalski, Madeline H; Choudhary, Saket; Hoffman, Paul; Hartman, Austin; Srivastava, Avi; Molla, Gesmira; Madad, Shaista; Fernandez-Granda, Carlos; Satija, Rahul | Nature biotechnology | 37231261 | 2023 May 25 |
| Label-Free Chemically and Molecularly Selective Magnetic Resonance Imaging. | Wu, Tianhe; Liu, Claire; Thamizhchelvan, Anbu Mozhi; Fleischer, Candace; Peng, Xingui; Liu, Guanshu; Mao, Hui | Chemical & biomedical imaging | 37235188 | 2023 May 22 |
| Decoding the hydrodynamic properties of microscale helical propellers from Brownian fluctuations. | Djutanta, Franky; Brown, Peter T; Nainggolan, Bonfilio; Coullomb, Alexis; Radhakrishnan, Sritharini; Sentosa, Jason; Yurke, Bernard; Hariadi, Rizal F; Shepherd, Douglas P | Proceedings of the National Academy of Sciences of the United States of America | 37235635 | 2023 May 30 |
| DLBCL-associated NOTCH2 mutations escape ubiquitin-dependent degradation and promote chemoresistance. | Zhou, Nan; Choi, Jaewoo; Grothusen, Grant; Kim, Bang-Jin; Ren, Diqiu; Cao, Zhendong; Liu, Yiman; Li, Qinglan; Inamdar, Arati; Beer, Thomas; Tang, Hsin-Yao; Perkey, Eric; Maillard, Ivan; Bonasio, Roberto; Shi, Junwei; Ruella, Marco; Wan, Liling; Busino, Luca | Blood | 37235754 | 2023 Sep 14 |
| The enteric nervous system relays psychological stress to intestinal inflammation. | Schneider, Kai Markus; Blank, Niklas; Alvarez, Yelina; Thum, Katharina; Lundgren, Patrick; Litichevskiy, Lev; Sleeman, Madeleine; Bahnsen, Klaas; Kim, Jihee; Kardo, Simon; Patel, Shaan; Dohnalová, Lenka; Uhr, Giulia T; Descamps, Hélène C; Kircher, Susanna; McSween, Alana M; Ardabili, Ashkan Rezazadeh; Nemec, Kelsey M; Jimenez, Monica T; Glotfelty, Lila G; Eisenberg, Joshua D; Furth, Emma E; Henao-Mejia, Jorge; Bennett, F Chris; Pierik, Marie J; Romberg-Camps, Mariëlle; Mujagic, Zlatan; Prinz, Marco; Schneider, Carolin V; Wherry, E John; Bewtra, Meenakshi; Heuckeroth, Robert O; Levy, Maayan; Thaiss, Christoph A | Cell | 37236193 | 2023 Jun 22 |
| Socioeconomic disadvantage and high-effort coping in childhood: evidence of skin-deep resilience. | Ehrlich, Katherine B; Lyle, Sarah M; Corallo, Kelsey L; Brisson, Julie M; Wiggins, Elizabeth R; Yu, Tianyi; Chen, Edith; Miller, Gregory E; Brody, Gene H | Journal of child psychology and psychiatry, and allied disciplines | 37246563 | 2023 May 29 |
| Polygenic prediction of preeclampsia and gestational hypertension. | Honigberg, Michael C; Truong, Buu; Khan, Raiyan R; Xiao, Brenda; Bhatta, Laxmi; Vy, Ha My T; Guerrero, Rafael F; Schuermans, Art; Selvaraj, Margaret Sunitha; Patel, Aniruddh P; Koyama, Satoshi; Cho, So Mi Jemma; Vellarikkal, Shamsudheen Karuthedath; Trinder, Mark; Urbut, Sarah M; Gray, Kathryn J; Brumpton, Ben M; Patil, Snehal; Zöllner, Sebastian; Antopia, Mariah C; Saxena, Richa; Nadkarni, Girish N; Do, Ron; Yan, Qi; Pe'er, Itsik; Verma, Shefali Setia; Gupta, Rajat M; Haas, David M; Martin, Hilary C; van Heel, David A; Laisk, Triin; Natarajan, Pradeep | Nature medicine | 37248299 | 2023 Jun |
| Immunogenetic Metabolomics Reveals Key Enzymes That Modulate CAR T-cell Metabolism and Function. | Renauer, Paul; Park, Jonathan J; Bai, Meizhu; Acosta, Arianny; Lee, Won-Ho; Lin, Guang Han; Zhang, Yueqi; Dai, Xiaoyun; Wang, Guangchuan; Errami, Youssef; Wu, Terence; Clark, Paul; Ye, Lupeng; Yang, Quanjun; Chen, Sidi | Cancer immunology research | 37253111 | 2023 Aug 03 |
| Expansion microscopy: A chemical approach for super-resolution microscopy. | Zhuang, Yinyin; Shi, Xiaoyu | Current opinion in structural biology | 37253290 | 2023 Aug |
| Spatial transcriptomics stratifies psoriatic disease severity by emergent cellular ecosystems. | Castillo, Rochelle L; Sidhu, Ikjot; Dolgalev, Igor; Chu, Tinyi; Prystupa, Aleksandr; Subudhi, Ipsita; Yan, Di; Konieczny, Piotr; Hsieh, Brandon; Haberman, Rebecca H; Selvaraj, Shanmugapriya; Shiomi, Tomoe; Medina, Rhina; Girija, Parvathy Vasudevanpillai; Heguy, Adriana; Loomis, Cynthia A; Chiriboga, Luis; Ritchlin, Christopher; Garcia-Hernandez, Maria De La Luz; Carucci, John; Meehan, Shane A; Neimann, Andrea L; Gudjonsson, Johann E; Scher, Jose U; Naik, Shruti | Science immunology | 37267384 | 2023 Jun 08 |
| Single cell transcriptomics of bone marrow derived macrophages reveals Ccl5 as a biomarker of direct IFNAR-independent responses to DNA sensing. | McCarty, Emily; Yu, Justin; Ninh, Van K; Calcagno, David M; Lee, Jodi; King, Kevin R | Frontiers in immunology | 37275883 | 2023 |
| Identifying properties of pattern completion neurons in a computational model of the visual cortex. | Baker, Casey M; Gong, Yiyang | PLoS computational biology | 37279242 | 2023 Jun |
| PIE-seq: identifying RNA-binding protein targets by dual RNA-deaminase editing and sequencing. | Ruan, Xiangbin; Hu, Kaining; Zhang, Xiaochang | Nature communications | 37280234 | 2023 Jun 06 |
| Proteome-Derived Peptide Libraries for Deep Specificity Profiling of N-terminal Modification Reagents. | Bridge, Haley N; Weeks, Amy M | Current protocols | 37283519 | 2023 Jun |
| Emerging roles of oligodendrocyte precursor cells in neural circuit development and remodeling. | Buchanan, JoAnn; da Costa, Nuno Maçarico; Cheadle, Lucas | Trends in neurosciences | 37286422 | 2023 Aug |
| Thyroid Cancers Exhibit Oncogene-Enhanced Macropinocytosis that Is Restrained by IGF1R and Promote Albumin-Drug Conjugate Response. | Hu, Huiyu; Ng, Thomas S C; Kang, Mikyung; Scott, Ella; Li, Ran; Quintana, Jeremy M; Matvey, Dylan; Vantaku, Venkata R; Weissleder, Ralph; Parangi, Sareh; Miller, Miles A | Clinical cancer research : an official journal of the American Association for Cancer Research | 37289199 | 2023 Sep 01 |
| Functional gene delivery to and across brain vasculature of systemic AAVs with endothelial-specific tropism in rodents and broad tropism in primates. | Chen, Xinhong; Wolfe, Damien A; Bindu, Dhanesh Sivadasan; Zhang, Mengying; Taskin, Naz; Goertsen, David; Shay, Timothy F; Sullivan, Erin E; Huang, Sheng-Fu; Ravindra Kumar, Sripriya; Arokiaraj, Cynthia M; Plattner, Viktor M; Campos, Lillian J; Mich, John K; Monet, Deja; Ngo, Victoria; Ding, Xiaozhe; Omstead, Victoria; Weed, Natalie; Bishaw, Yeme; Gore, Bryan B; Lein, Ed S; Akrami, Athena; Miller, Cory; Levi, Boaz P; Keller, Annika; Ting, Jonathan T; Fox, Andrew S; Eroglu, Cagla; Gradinaru, Viviana | Nature communications | 37291094 | 2023 Jun 08 |
| Template-jumping prime editing enables large insertion and exon rewriting in vivo. | Zheng, Chunwei; Liu, Bin; Dong, Xiaolong; Gaston, Nicholas; Sontheimer, Erik J; Xue, Wen | Nature communications | 37291100 | 2023 Jun 08 |
| Dirichlet Diffusion Score Model for Biological Sequence Generation. | Avdeyev, Pavel; Shi, Chenlai; Tan, Yuhao; Dudnyk, Kseniia; Zhou, Jian | ArXiv | 37292476 | 2023 Jun 16 |
| Activity of FoxP2-positive neurons correlates with begging behavior in a social tadpole. | Ludington, Sarah C; McKinney, Jordan E; Butler, Julie M; O'Connell, Lauren A | bioRxiv : the preprint server for biology | 37292748 | 2023 May 26 |
| Convergent mutations in phage virion assembly proteins enable evasion of Type I CBASS immunity. | Richmond-Buccola, Desmond; Hobbs, Samuel J; Garcia, Jasmine M; Toyoda, Hunter; Gao, Jingjing; Shao, Sichen; Lee, Amy S Y; Kranzusch, Philip J | bioRxiv : the preprint server for biology | 37292831 | 2023 May 22 |
| Evolution of transient RNA structure-RNA polymerase interactions in respiratory RNA virus genomes. | Rigby, Charlotte; Sabsay, Kimberly; Bisht, Karishma; Eggink, Dirk; Jalal, Hamid; Te Velthuis, Aartjan J W | bioRxiv : the preprint server for biology | 37292879 | 2023 May 26 |
| Modeling kidney development, disease, and plasticity with clonal expandable nephron progenitor cells and nephron organoids. | Huang, Biao; Zeng, Zipeng; Li, Hui; Li, Zexu; Chen, Xi; Guo, Jinjin; Zhang, Chennan C; Schreiber, Megan E; Vonk, Ariel C; Xiang, Tianyuan; Patel, Tadrushi; Li, Yidan; Parvez, Riana K; Der, Balint; Chen, Jyun Hao; Liu, Zhenqing; Thornton, Matthew E; Grubbs, Brendan H; Diao, Yarui; Dou, Yali; Gnedeva, Ksenia; Lindström, Nils O; Ying, Qilong; Pastor-Soler, Nuria M; Fei, Teng; Hallows, Kenneth R; McMahon, Andrew P; Li, Zhongwei | bioRxiv : the preprint server for biology | 37293038 | 2023 May 25 |
| An entorhinal-like region in food-caching birds. | Applegate, Marissa C; Gutnichenko, Konstantin S; Mackevicius, Emily L; Aronov, Dmitriy | Current biology : CB | 37295426 | 2023 Jun 19 |
| Dynamics of eastern equine encephalitis virus during the 2019 outbreak in the Northeast United States. | Hill, Verity; Koch, Robert T; Bialosuknia, Sean M; Ngo, Kiet; Zink, Steven D; Koetzner, Cheri A; Maffei, Joseph G; Dupuis, Alan P; Backenson, P Bryon; Oliver, JoAnne; Bransfield, Angela B; Misencik, Michael J; Petruff, Tanya A; Shepard, John J; Warren, Joshua L; Gill, Mandev S; Baele, Guy; Vogels, Chantal B F; Gallagher, Glen; Burns, Paul; Hentoff, Aaron; Smole, Sandra; Brown, Catherine; Osborne, Matthew; Kramer, Laura D; Armstrong, Philip M; Ciota, Alexander T; Grubaugh, Nathan D | Current biology : CB | 37295427 | 2023 Jun 19 |
| RNA binding by the glucocorticoid receptor attenuates dexamethasone-induced gene activation. | Lammer, Nickolaus C; Ashraf, Humza M; Ugay, Daniella A; Spencer, Sabrina L; Allen, Mary A; Batey, Robert T; Wuttke, Deborah S | Scientific reports | 37296231 | 2023 Jun 09 |
| Hierarchical contribution of individual lifestyle factors and their interactions on adenomatous and serrated polyp risk. | Kim, Jihee; Nath, Kirti; Schmidlin, Kurt; Schaufelberger, Helen; Quattropani, Christiana; Vannini, Simone; Mossi, Sandro; Thumshirn, Miriam; Manz, Michael; Litichevskiy, Lev; Fan, Jiaxin; Dmitrieva-Posocco, Oxana; Li, Mingyao; Levy, Maayan; Schär, Primo; Zwahlen, Marcel; Thaiss, Christoph A; Truninger, Kaspar | Journal of gastroenterology | 37300599 | 2023 Sep |
| In vivo bone marrow microenvironment siRNA delivery using lipid-polymer nanoparticles for multiple myeloma therapy. | Guimarães, Pedro P G; Figueroa-Espada, Christian G; Riley, Rachel S; Gong, Ningqiang; Xue, Lulu; Sewastianik, Tomasz; Dennis, Peter S; Loebel, Claudia; Chung, Amanda; Shepherd, Sarah J; Haley, Rebecca M; Hamilton, Alex G; El-Mayta, Rakan; Wang, Karin; Langer, Robert; Anderson, Daniel G; Carrasco, Ruben D; Mitchell, Michael J | Proceedings of the National Academy of Sciences of the United States of America | 37310997 | 2023 Jun 20 |
| Histone H3 lysine 27 crotonylation mediates gene transcriptional repression in chromatin. | Liu, Nan; Konuma, Tsuyoshi; Sharma, Rajal; Wang, Deyu; Zhao, Nan; Cao, Lingling; Ju, Ying; Liu, Di; Wang, Shuai; Bosch, Almudena; Sun, Yifei; Zhang, Siwei; Ji, Donglei; Nagatoishi, Satoru; Suzuki, Noa; Kikuchi, Masaki; Wakamori, Masatoshi; Zhao, Chengcheng; Ren, Chunyan; Zhou, Thomas Jiachi; Xu, Yaoyao; Meslamani, Jamel; Fu, Shibo; Umehara, Takashi; Tsumoto, Kouhei; Akashi, Satoko; Zeng, Lei; Roeder, Robert G; Walsh, Martin J; Zhang, Qiang; Zhou, Ming-Ming | Molecular cell | 37311463 | 2023 Jul 06 |
| Rescue of hearing by adenine base editing in a humanized mouse model of Usher syndrome type 1F. | Peters, Cole W; Hanlon, Killian S; Ivanchenko, Maryna V; Zinn, Eric; Linarte, Elizabeth F; Li, Yaqiao; Levy, Jonathan M; Liu, David R; Kleinstiver, Benjamin P; Indzhykulian, Artur A; Corey, David P | Molecular therapy : the journal of the American Society of Gene Therapy | 37312453 | 2023 Aug 02 |
| Immune profiling of murine cardiac leukocytes identifies triggering receptor expressed on myeloid cells 2 as a novel mediator of hypertensive heart failure. | Smart, Charles Duncan; Fehrenbach, Daniel J; Wassenaar, Jean W; Agrawal, Vineet; Fortune, Niki L; Dixon, Debra D; Cottam, Matthew A; Hasty, Alyssa H; Hemnes, Anna R; Doran, Amanda C; Gupta, Deepak K; Madhur, Meena S | Cardiovascular research | 37314125 | 2023 Oct 24 |
| Compromised nonsense-mediated RNA decay results in truncated RNA-binding protein production upon DUX4 expression. | Campbell, Amy E; Dyle, Michael C; Albanese, Roberto; Matheny, Tyler; Sudheendran, Kavitha; Cortázar, Michael A; Forman, Thomas; Fu, Rui; Gillen, Austin E; Caruthers, Marvin H; Floor, Stephen N; Calviello, Lorenzo; Jagannathan, Sujatha | Cell reports | 37314931 | 2023 Jun 27 |
| Modeling enteric glia development, physiology and disease using human pluripotent stem cells. | Scantlen, Megan D; Majd, Homa; Fattahi, Faranak | Neuroscience letters | 37315730 | 2023 Aug 10 |
| DOT1L bridges transcription and heterochromatin formation at mammalian pericentromeres. | Malla, Aushaq B; Yu, Haoming; Farris, Delaney; Kadimi, Srilekha; Lam, TuKiet T; Cox, Andy L; Smith, Zachary D; Lesch, Bluma J | EMBO reports | 37317657 | 2023 Aug 03 |
| Highly multiplexed bioactivity screening reveals human and microbiota metabolome-GPCRome interactions. | Chen, Haiwei; Rosen, Connor E; González-Hernández, Jaime A; Song, Deguang; Potempa, Jan; Ring, Aaron M; Palm, Noah W | Cell | 37321219 | 2023 Jul 06 |
| Clonal hematopoiesis is associated with protection from Alzheimer's disease. | Bouzid, Hind; Belk, Julia A; Jan, Max; Qi, Yanyan; Sarnowski, Chloé; Wirth, Sara; Ma, Lisa; Chrostek, Matthew R; Ahmad, Herra; Nachun, Daniel; Yao, Winnie; NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium; Beiser, Alexa; Bick, Alexander G; Bis, Joshua C; Fornage, Myriam; Longstreth Jr, William T; Lopez, Oscar L; Natarajan, Pradeep; Psaty, Bruce M; Satizabal, Claudia L; Weinstock, Joshua; Larson, Eric B; Crane, Paul K; Keene, C Dirk; Seshadri, Sudha; Satpathy, Ansuman T; Montine, Thomas J; Jaiswal, Siddhartha | Nature medicine | 37322115 | 2023 Jun 15 |
| Nanosensor-based monitoring of autophagy-associated lysosomal acidification in vivo. | Kim, Mijin; Chen, Chen; Yaari, Zvi; Frederiksen, Rune; Randall, Ewelina; Wollowitz, Jaina; Cupo, Christian; Wu, Xiaojian; Shah, Janki; Worroll, Daniel; Lagenbacher, Rachel E; Goerzen, Dana; Li, Yue-Ming; An, Heeseon; Wang, YuHuang; Heller, Daniel A | Nature chemical biology | 37322156 | 2023 Dec |
| Preservation of ∼12-h ultradian rhythms of gene expression of mRNA and protein metabolism in the absence of canonical circadian clock. | Zhu, Bokai; Liu, Silvia | Frontiers in physiology | 37324401 | 2023 |
| In-depth Sequence-Function Characterization Reveals Multiple Pathways to Enhance Enzymatic Activity. | Trivedi, Vikas D; Chappell, Todd C; Krishna, Naveen B; Shetty, Anuj; Sigamani, Gladstone G; Mohan, Karishma; Ramesh, Athreya; Pravin, Kumar R; Nair, Nikhil U | ACS catalysis | 37325394 | 2022 Feb 18 |
| Injectable pulverized electrospun poly(lactic-co-glycolic acid) fibers improve human adipose tissue engraftment and volume retention. | Das, Devleena; Lawrence, William R; Diaz-Starokozheva, Ludmila; Salazar-Puerta, Ana I; Ott, Neil; Goebel, Erin R; Damughatla, Abhishek; Vidal, Pablo; Gallentine, Summer; Moore, Jordan T; Kayuha, Douglas; Mendonca, Natalia C; Albert, Jared B; Houser, Robert; Johnson, Jed; Powell, Heather; Higuita-Castro, Natalia; Stanford, Kristin I; Gallego-Perez, Daniel | Journal of biomedical materials research. Part A | 37326365 | 2023 Nov |
| Nuclear quadrupole resonance spectroscopy with a femtotesla diamond magnetometer. | Silani, Yaser; Smits, Janis; Fescenko, Ilja; Malone, Michael W; McDowell, Andrew F; Jarmola, Andrey; Kehayias, Pauli; Richards, Bryan A; Mosavian, Nazanin; Ristoff, Nathaniel; Acosta, Victor M | Science advances | 37327342 | 2023 Jun 16 |
| CRISPR tiling screen reveals cancer epigenetic 'Goldilocks' state. | Barka, Aleksia; Kohli, Rahul M; Shi, Junwei | Trends in pharmacological sciences | 37328396 | 2023 Sep |
| Fragmentomic analysis of circulating tumor DNA-targeted cancer panels. | Helzer, K T; Sharifi, M N; Sperger, J M; Shi, Y; Annala, M; Bootsma, M L; Reese, S R; Taylor, A; Kaufmann, K R; Krause, H K; Schehr, J L; Sethakorn, N; Kosoff, D; Kyriakopoulos, C; Burkard, M E; Rydzewski, N R; Yu, M; Harari, P M; Bassetti, M; Blitzer, G; Floberg, J; Sjöström, M; Quigley, D A; Dehm, S M; Armstrong, A J; Beltran, H; McKay, R R; Feng, F Y; O'Regan, R; Wisinski, K B; Emamekhoo, H; Wyatt, A W; Lang, J M; Zhao, S G | Annals of oncology : official journal of the European Society for Medical Oncology | 37330052 | 2023 Sep |
| Machine Learning & Molecular Radiation Tumor Biomarkers. | Rydzewski, Nicholas R; Helzer, Kyle T; Bootsma, Matthew; Shi, Yue; Bakhtiar, Hamza; Sjöström, Martin; Zhao, Shuang G | Seminars in radiation oncology | 37331779 | 2023 Jul |
| Predicting tuberculosis drug resistance with machine learning-assisted Raman spectroscopy. | Ogunlade, Babatunde; Tadesse, Loza F; Li, Hongquan; Vu, Nhat; Banaei, Niaz; Barczak, Amy K; Saleh, Amr A E; Prakash, Manu; Dionne, Jennifer A | ArXiv | 37332564 | 2023 Jun 09 |
| Widespread impact of immunoglobulin V gene allelic polymorphisms on antibody reactivity. | Yuan, Meng; Feng, Ziqi; Lv, Huibin; So, Natalie; Shen, Ivana R; Tan, Timothy J C; Teo, Qi Wen; Ouyang, Wenhao O; Talmage, Logan; Wilson, Ian A; Wu, Nicholas C | bioRxiv : the preprint server for biology | 37333077 | 2023 Jun 07 |
| Spatial Mapping of Mobile Genetic Elements and their Cognate Hosts in Complex Microbiomes. | Grodner, Benjamin; Shi, Hao; Farchione, Owen; Vill, Albert C; Ntekas, Ioannis; Diebold, Peter J; Zipfel, Warren R; Brito, Ilana L; De Vlaminck, Iwijn | bioRxiv : the preprint server for biology | 37333098 | 2023 Jun 09 |
| 3D spheroid culturing of Astyanax mexicanus liver-derived cell lines recapitulates distinct transcriptomic and metabolic states of in vivo tissue environment. | Biswas, Tathagata; Rajendran, Naresh; Hassan, Huzaifa; Zhao, Chongbei; Rohner, Nicolas | bioRxiv : the preprint server for biology | 37333136 | 2023 Jun 10 |
| Beyond antibiotic resistance: the whiB7 transcription factor coordinates an adaptive response to alanine starvation in mycobacteria. | Poulton, Nicholas C; DeJesus, Michael A; Munsamy-Govender, Vanisha; Roberts, Cameron G; Azadian, Zachary A; Bosch, Barbara; Lin, Karl Matthew; Li, Shuqi; Rock, Jeremy M | bioRxiv : the preprint server for biology | 37333137 | 2023 Jun 05 |
| A Spatiotemporal Compartmentalization of Glucose Metabolism Guides Mammalian Gastrulation Progression. | Cao, Dominica; Zhong, Liangwen; Hemalatha, Anupama; Bergmann, Jenna; Cox, Andy L; Greco, Valentina; Sozen, Berna | bioRxiv : the preprint server for biology | 37333168 | 2023 Jun 08 |
| Scalable projected Light Sheet Microscopy for high-resolution imaging of large samples. | Chen, Yannan; Gong, Cheng; Chauhan, Shradha; De La Cruz, Estanislao Daniel; Datta, Malika S; Tomer, Raju | bioRxiv : the preprint server for biology | 37333196 | 2023 Jun 05 |
| Hidden protein-altering variants influence diverse human phenotypes. | Hujoel, Margaux L A; Handsaker, Robert E; Sherman, Maxwell A; Kamitaki, Nolan; Barton, Alison R; Mukamel, Ronen E; Terao, Chikashi; McCarroll, Steven A; Loh, Po-Ru | bioRxiv : the preprint server for biology | 37333244 | 2023 Jun 09 |
| ENPP1 is an innate immune checkpoint of the anticancer cGAMP-STING pathway. | Wang, Songnan; Böhnert, Volker; Joseph, Alby J; Sudaryo, Valentino; Swinderman, Jason; B Yu, Feiqiao; Lyu, Xuchao; Skariah, Gemini; Subramanyam, Vishvak; Gilbert, Luke A; Goodarzi, Hani; Li, Lingyin | bioRxiv : the preprint server for biology | 37333273 | 2023 Jun 05 |
| Functional characterization of helminth-associated Clostridiales reveals covariates of Treg differentiation. | Sargsian, Shushan; Lejeune, Alannah; Ercelen, Defne; Jin, Wen-Bing; Varghese, Alan; Loke, P'ng; Lim, Yvonne A L; Guo, Chun-Jun; Cadwell, Ken | bioRxiv : the preprint server for biology | 37333296 | 2023 Jun 07 |
| Differential dynamics specify MeCP2 function at methylated DNA and nucleosomes. | Chua, Gabriella N L; Watters, John W; Olinares, Paul Dominic B; Luo, Joshua A; Chait, Brian T; Liu, Shixin | bioRxiv : the preprint server for biology | 37333354 | 2023 Jun 05 |
| Rapid and Multiplexed Nucleic Acid Detection using Programmable Aptamer-Based RNA Switches. | Yan, Zhaoqing; Tang, Anli A; Eshed, Amit; Ticktin, Zackary M; Chaudhary, Soma; Ma, Duo; McCutcheon, Griffin; Li, Yudan; Wu, Kaiyue; Saha, Sanchari; Alcantar-Fernandez, Jonathan; Moreno-Camacho, Jose L; Campos-Romero, Abraham; Collins, James J; Yin, Peng; Green, Alexander A | medRxiv : the preprint server for health sciences | 37333364 | 2023 Jun 06 |
| Combined GWAS and single cell transcriptomics uncover the underlying genes and cell types in disorders of gut-brain interaction. | Majd, Alireza; Richter, Mikayla N; Samuel, Ryan M; Cesiulis, Andrius; Ghazizadeh, Zaniar; Wang, Jeffrey; Fattahi, Faranak | medRxiv : the preprint server for health sciences | 37333423 | 2023 Jun 05 |
| Opportunities to expand postpartum support for those in recovery from opioid use disorder: Results from a qualitative study. | Allen, Alicia; Bueno, Yvonne; Mallahan, Stephanie; MacPherson, Allison Huff; Armin, Julie | Drug and alcohol dependence reports | 37334156 | 2023 Jun |
| A complex of Wnt/planar cell polarity signaling components Vangl1 and Fzd7 drives glioblastoma multiforme malignant properties. | Dreyer, Courtney A; VanderVorst, Kacey; Natwick, Dean; Bell, George; Sood, Prachi; Hernandez, Maria; Angelastro, James M; Collins, Sean R; Carraway 3rd, Kermit L | Cancer letters | 37336284 | 2023 Jul 28 |
| Effects of solvent conditions on the self-assembly of heterotrimeric collagen-like peptide (CLP) triple helices: a coarse-grained simulation study. | Taylor, Phillip A; Kronenberger, Stephen; Kloxin, April M; Jayaraman, Arthi | Soft matter | 37340986 | 2023 Jul 05 |
| Progress toward Proteome-Wide Photo-Cross-Linking to Enable Residue-Level Visualization of Protein Structures and Networks In Vivo. | Faustino, Anneliese M; Sharma, Piyoosh; Manriquez-Sandoval, Edgar; Yadav, Divya; Fried, Stephen D | Analytical chemistry | 37341467 | 2023 Jul 18 |
| Systematic analysis of the molecular and biophysical properties of key DNA damage response factors. | Heyza, Joshua R; Mikhova, Mariia; Bahl, Aastha; Broadbent, David G; Schmidt, Jens C | eLife | 37341699 | 2023 Jun 21 |
| Comparative landscape of genetic dependencies in human and chimpanzee stem cells. | She, Richard; Fair, Tyler; Schaefer, Nathan K; Saunders, Reuben A; Pavlovic, Bryan J; Weissman, Jonathan S; Pollen, Alex A | Cell | 37343560 | 2023 Jul 06 |
| Hindbrain modules differentially transform activity of single collicular neurons to coordinate movements. | Zahler, Sebastian H; Taylor, David E; Wright, Brennan S; Wong, Joey Y; Shvareva, Varvara A; Park, Yusol A; Feinberg, Evan H | Cell | 37343561 | 2023 Jul 06 |
| Acentrosomal spindles assemble from branching microtubule nucleation near chromosomes in Xenopus laevis egg extract. | Gouveia, Bernardo; Setru, Sagar U; King, Matthew R; Hamlin, Aaron; Stone, Howard A; Shaevitz, Joshua W; Petry, Sabine | Nature communications | 37344488 | 2023 Jun 21 |
| Structural basis of protein condensation on microtubules underlying branching microtubule nucleation. | Guo, Changmiao; Alfaro-Aco, Raymundo; Zhang, Chunting; Russell, Ryan W; Petry, Sabine; Polenova, Tatyana | Nature communications | 37344496 | 2023 Jun 21 |
| Birth Weight Is Associated With Clonal Hematopoiesis of Indeterminate Potential and Cardiovascular Outcomes in Adulthood. | Schuermans, Art; Nakao, Tetsushi; Ruan, Yunfeng; Koyama, Satoshi; Yu, Zhi; Uddin, Md Mesbah; Haidermota, Sara; Hornsby, Whitney; Lewandowski, Adam J; Bick, Alexander G; Niroula, Abhishek; Jaiswal, Siddhartha; Ebert, Benjamin L; Natarajan, Pradeep; Honigberg, Michael C | Journal of the American Heart Association | 37345823 | 2023 Jul 04 |
| Purification and characterization of tomato arginine decarboxylase and its inhibition by the bacterial small molecule phevamine A. | Guo, Qiang; Chen, Xiaoyan; Li, Bo | Protein expression and purification | 37348664 | 2023 Oct |
| Multifunctional microelectronic fibers enable wireless modulation of gut and brain neural circuits. | Sahasrabudhe, Atharva; Rupprecht, Laura E; Orguc, Sirma; Khudiyev, Tural; Tanaka, Tomo; Sands, Joanna; Zhu, Weikun; Tabet, Anthony; Manthey, Marie; Allen, Harrison; Loke, Gabriel; Antonini, Marc-Joseph; Rosenfeld, Dekel; Park, Jimin; Garwood, Indie C; Yan, Wei; Niroui, Farnaz; Fink, Yoel; Chandrakasan, Anantha; Bohórquez, Diego V; Anikeeva, Polina | Nature biotechnology | 37349522 | 2023 Jun 22 |
| Microbiome modulates immunotherapy response in cutaneous squamous cell carcinoma. | Voigt, Anita Y; Walter, Andrew; Young, Timothy H; Graham, John P; Batista Bittencourt, Bruna M; de Mingo Pulido, Alvaro; Prieto, Karol; Tsai, Kenneth Y; Sundberg, John P; Oh, Julia | Experimental dermatology | 37350109 | 2023 Oct |
| Skin microbiome attributes associate with biophysical skin ageing. | Zhou, Wei; Fleming, Elizabeth; Legendre, Guylaine; Roux, Lauriane; Latreille, Julie; Gendronneau, Gaëlle; Forestier, Sandra; Oh, Julia | Experimental dermatology | 37350224 | 2023 Sep |
| Sex differences in deleterious genetic variants in a haplodiploid social insect. | Miller, Sara E; Sheehan, Michael J | Molecular ecology | 37350360 | 2023 Aug |
| Nrf2 Drives Hepatocellular Carcinoma Progression through Acetyl-CoA-Mediated Metabolic and Epigenetic Regulatory Networks. | Xi, Caixia; Pang, Junfeng; Barrett, Amanda; Horuzsko, Anatolij; Ande, Satyanarayana; Mivechi, Nahid F; Zhu, Xingguo | Molecular cancer research : MCR | 37364049 | 2023 Oct 02 |
| Lipid nanoparticle topology regulates endosomal escape and delivery of RNA to the cytoplasm. | Zheng, Lining; Bandara, Sarith R; Tan, Zhengzhong; Leal, Cecilia | Proceedings of the National Academy of Sciences of the United States of America | 37364130 | 2023 Jul 04 |
| Adjuvant lipidoid-substituted lipid nanoparticles augment the immunogenicity of SARS-CoV-2 mRNA vaccines. | Han, Xuexiang; Alameh, Mohamad-Gabriel; Butowska, Kamila; Knox, James J; Lundgreen, Kendall; Ghattas, Majed; Gong, Ningqiang; Xue, Lulu; Xu, Ying; Lavertu, Marc; Bates, Paul; Xu, Junchao; Nie, Guangjun; Zhong, Yi; Weissman, Drew; Mitchell, Michael J | Nature nanotechnology | 37365276 | 2023 Jun 26 |
| Calcium-triggered DNA-mediated membrane fusion in synthetic cells. | Hsu, Yen-Yu; Chen, Samuel J; Bernal-Chanchavac, Julio; Sharma, Bineet; Moghimianavval, Hossein; Stephanopoulos, Nicholas; Liu, Allen P | Chemical communications (Cambridge, England) | 37365952 | 2023 Jul 13 |
| cGLRs are a diverse family of pattern recognition receptors in innate immunity. | Li, Yao; Slavik, Kailey M; Toyoda, Hunter C; Morehouse, Benjamin R; de Oliveira Mann, Carina C; Elek, Anamaria; Levy, Shani; Wang, Zhenwei; Mears, Kepler S; Liu, Jingjing; Kashin, Dmitry; Guo, Ximing; Mass, Tali; Sebé-Pedrós, Arnau; Schwede, Frank; Kranzusch, Philip J | Cell | 37379839 | 2023 Jul 20 |
| Neural stem cell metabolism revisited: a critical role for mitochondria. | Scandella, Valentina; Petrelli, Francesco; Moore, Darcie L; Braun, Simon M G; Knobloch, Marlen | Trends in endocrinology and metabolism: TEM | 37380501 | 2023 Aug |
| Spit, Disgust, and Parasite Stress Theory: A Message Experiment. | Chavez-Yenter, Daniel; Lille, Helen M; Gorissen, Sebastiaan; John, Kevin K; Vega, Alexis S; Jensen, Jakob D | Journal of health communication | 37382498 | 2023 Aug 03 |
| Editorial: Broadening our conceptual understanding of endogenous opioids in systems neuroscience. | Tejeda, Hugo A; Massaly, Nicolas; Corder, Gregory; Cahill, Catherine M | Frontiers in systems neuroscience | 37383356 | 2023 |
| Spatially resolved single-cell translatomics at molecular resolution. | Zeng, Hu; Huang, Jiahao; Ren, Jingyi; Wang, Connie Kangni; Tang, Zefang; Zhou, Haowen; Zhou, Yiming; Shi, Hailing; Aditham, Abhishek; Sui, Xin; Chen, Hongyu; Lo, Jennifer A; Wang, Xiao | Science (New York, N.Y.) | 37384709 | 2023 Jun 30 |
| The landscape of somatic mutations in lymphoblastoid cell lines. | Caballero, Madison; Koren, Amnon | Cell genomics | 37388907 | 2023 Jun 14 |
| Cell-type specificity of the human mutation landscape with respect to DNA replication dynamics. | Caballero, Madison; Boos, Dominik; Koren, Amnon | Cell genomics | 37388911 | 2023 Jun 14 |
| Infusible Extracellular Matrix Biomaterial Promotes Vascular Integrity and Modulates the Inflammatory Response in Acute Traumatic Brain Injury. | Diaz, Miranda D; Kandell, Rebecca M; Wu, Jason R; Chen, Alexander; Christman, Karen L; Kwon, Ester J | Advanced healthcare materials | 37390094 | 2023 Oct |
| Base editor screens for in situ mutational scanning at scale. | Lue, Nicholas Z; Liau, Brian B | Molecular cell | 37390819 | 2023 Jul 06 |
| Shifting early embryology paradigms: Applications of stem cell-based embryo models in bioengineering. | Abel, Ashley; Sozen, Berna | Current opinion in genetics & development | 37392541 | 2023 Aug |
| CXCR3 expression in regulatory T cells drives interactions with type I dendritic cells in tumors to restrict CD8+ T cell antitumor immunity. | Moreno Ayala, Mariela A; Campbell, Timothy F; Zhang, Chenyu; Dahan, Noa; Bockman, Alissa; Prakash, Varsha; Feng, Lawrence; Sher, Theo; DuPage, Michel | Immunity | 37392735 | 2023 Jul 11 |
| When a calorie is not just a calorie: Diet quality and timing as mediators of metabolism and healthy aging. | Mihaylova, Maria M; Chaix, Amandine; Delibegovic, Mirela; Ramsey, Jon J; Bass, Joseph; Melkani, Girish; Singh, Rajat; Chen, Zheng; Ja, William W; Shirasu-Hiza, Michele; Latimer, Mary N; Mattison, Julie A; Thalacker-Mercer, Anna E; Dixit, Vishwa Deep; Panda, Satchidananda; Lamming, Dudley W | Cell metabolism | 37392742 | 2023 Jun 25 |
| An Atlas of Variant Effects to understand the genome at nucleotide resolution. | Fowler, Douglas M; Adams, David J; Gloyn, Anna L; Hahn, William C; Marks, Debora S; Muffley, Lara A; Neal, James T; Roth, Frederick P; Rubin, Alan F; Starita, Lea M; Hurles, Matthew E | Genome biology | 37394429 | 2023 Jul 03 |
| Temporal Mapper: Transition networks in simulated and real neural dynamics. | Zhang, Mengsen; Chowdhury, Samir; Saggar, Manish | Network neuroscience (Cambridge, Mass.) | 37397880 | 2023 |
| Multiplex single-cell chemical genomics reveals the kinase dependence of the response to targeted therapy. | McFaline-Figueroa, José L; Srivatsan, Sanjay; Hill, Andrew J; Gasperini, Molly; Jackson, Dana L; Saunders, Lauren; Domcke, Silvia; Regalado, Samuel G; Lazarchuck, Paul; Alvarez, Sarai; Monnat Jr, Raymond J; Shendure, Jay; Trapnell, Cole | bioRxiv : the preprint server for biology | 37398090 | 2023 Jun 14 |
| Efficient Sex Separation by Exploiting Differential Alternative Splicing of a Dominant Marker in Aedes aegypti. | Weng, Shih-Che; Antoshechkin, Igor; Marois, Eric; Akbari, Omar S | bioRxiv : the preprint server for biology | 37398094 | 2023 Jun 16 |
| Resolving conformational changes that mediate a two-step catalytic mechanism in a model enzyme. | Greisman, Jack B; Dalton, Kevin M; Brookner, Dennis E; Klureza, Margaret A; Sheehan, Candice J; Kim, In-Sik; Henning, Robert W; Russi, Silvia; Hekstra, Doeke R | bioRxiv : the preprint server for biology | 37398233 | 2023 Jun 03 |
| Evolutionary engineering a larger porin using a loop-to-hairpin mechanism. | Dhar, Rik; Bowman, Alexander M; Hatungimana, Brunojoel; Slusky, Joanna Sg | bioRxiv : the preprint server for biology | 37398247 | 2023 Sep 20 |
| Integrative identification of non-coding regulatory regions driving metastatic prostate cancer. | Woo, Brian J; Moussavi-Baygi, Ruhollah; Karner, Heather; Karimzadeh, Mehran; Garcia, Kristle; Joshi, Tanvi; Yin, Keyi; Navickas, Albertas; Gilbert, Luke A; Wang, Bo; Asgharian, Hosseinali; Feng, Felix Y; Goodarzi, Hani | bioRxiv : the preprint server for biology | 37398273 | 2023 Jun 02 |
| Cell morphology best predicts tumorigenicity and metastasis in vivo across multiple TNBC cell lines of different metastatic potential. | Conner, Sydney; Guarin, Justinne R; Le, Thanh T; Fatherree, Jackson; Kelley, Charlotte; Payne, Samantha; Salhany, Ken; McGinn, Rachel; Henrich, Emily; Yui, Anna; Parker, Savannah; Srinivasan, Deepti; Bloomer, Hanan; Borges, Hannah; Oudin, Madeleine J | bioRxiv : the preprint server for biology | 37398306 | 2023 Jun 14 |
| Exploring natural odour landscapes: A case study with implications for human-biting insects. | Zung, Jessica L; Kotb, Sumer M; McBride, Carolyn S | bioRxiv : the preprint server for biology | 37398328 | 2023 May 30 |
| Progressive excitability changes in the medial entorhinal cortex in the 3xTg mouse model of Alzheimer's disease pathology. | Chen, Lingxuan; Wick, Zoé Christenson; Vetere, Lauren M; Vaughan, Nick; Jurkowski, Albert; Galas, Angelina; Diego, Keziah S; Philipsberg, Paul; Cai, Denise J; Shuman, Tristan | bioRxiv : the preprint server for biology | 37398359 | 2023 May 30 |
| CARD-like domains mediate anti-phage defense in bacterial gasdermin systems. | Wein, Tanita; Johnson, Alex G; Millman, Adi; Lange, Katharina; Yirmiya, Erez; Hadary, Romi; Garb, Jeremy; Steinruecke, Felix; Hill, Aidan B; Kranzusch, Philip J; Sorek, Rotem | bioRxiv : the preprint server for biology | 37398489 | 2023 May 29 |
| Network effects of Stanford Neuromodulation Therapy (SNT) in treatment-resistant major depressive disorder: a randomized, controlled trial. | Batail, Jean-Marie; Xiao, Xiaoqian; Azeez, Azeezat; Tischler, Claudia; Kratter, Ian H; Bishop, James H; Saggar, Manish; Williams, Nolan R | Translational psychiatry | 37400432 | 2023 Jul 03 |
| Prediction of on-target and off-target activity of CRISPR-Cas13d guide RNAs using deep learning. | Wessels, Hans-Hermann; Stirn, Andrew; Méndez-Mancilla, Alejandro; Kim, Eric J; Hart, Sydney K; Knowles, David A; Sanjana, Neville E | Nature biotechnology | 37400521 | 2023 Jul 03 |
| Generation of 3D Trophoblast Organoids from Human Naïve Pluripotent Stem Cells. | Karvas, Rowan M; Theunissen, Thorold W | Methods in molecular biology (Clifton, N.J.) | 37402094 | 2023 Jul 05 |
| Variability in Donor Lung Culture and Relative Humidity Impact the Stability of 2009 Pandemic H1N1 Influenza Virus on Nonporous Surfaces. | Qian, Zhihong; Morris, Dylan H; Avery, Annika; Kormuth, Karen A; Le Sage, Valerie; Myerburg, Michael M; Lloyd-Smith, James O; Marr, Linsey C; Lakdawala, Seema S | Applied and environmental microbiology | 37404191 | 2023 Jul 26 |
| Genome-wide screen identifies host loci that modulate Mycobacterium tuberculosis fitness in immunodivergent mice. | Meade, Rachel K; Long, Jarukit E; Jinich, Adrian; Rhee, Kyu Y; Ashbrook, David G; Williams, Robert W; Sassetti, Christopher M; Smith, Clare M | G3 (Bethesda, Md.) | 37405387 | 2023 Aug 30 |
| A confinable female-lethal population suppression system in the malaria vector, Anopheles gambiae. | Smidler, Andrea L; Pai, James J; Apte, Reema A; Sánchez C, Héctor M; Corder, Rodrigo M; Jeffrey Gutiérrez, Eileen; Thakre, Neha; Antoshechkin, Igor; Marshall, John M; Akbari, Omar S | Science advances | 37406109 | 2023 Jul 07 |
| Towards universal synthetic heterotrophy using a metabolic coordinator. | Sullivan, Sean F; Shetty, Anuj; Bharadwaj, Tharun; Krishna, Naveen; Trivedi, Vikas D; Endalur Gopinarayanan, Venkatesh; Chappell, Todd C; Sellers, Daniel M; Pravin Kumar, R; Nair, Nikhil U | Metabolic engineering | 37406763 | 2023 Sep |
| Enhancement of Lipid Signals in Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry with Ammonium Fluoride as a Matrix Additive. | Holbrook, Joseph H; Sekera, Emily R; Lopez, Arbil; Fries, Brian D; Tobias, Fernando; Akkaya, Kubra; Mihaylova, Maria M; Hummon, Amanda B | Analytical chemistry | 37418337 | 2023 Jul 18 |
| Proximity-labeling chemoproteomics defines the subcellular cysteinome and inflammation-responsive mitochondrial redoxome. | Yan, Tianyang; Julio, Ashley R; Villanueva, Miranda; Jones, Anthony E; Ball, Andréa B; Boatner, Lisa M; Turmon, Alexandra C; Nguyễn, Kaitlyn B; Yen, Stephanie L; Desai, Heta S; Divakaruni, Ajit S; Backus, Keriann M | Cell chemical biology | 37419112 | 2023 Jul 20 |
| Integration of metabolism and regulation reveals rapid adaptability to growth on non-native substrates. | Trivedi, Vikas D; Sullivan, Sean F; Choudhury, Debika; Endalur Gopinarayanan, Venkatesh; Hart, Taylor; Nair, Nikhil U | Cell chemical biology | 37421944 | 2023 Sep 21 |
| Single Cell Multi-Omics of an iPSC Model of Human Sinoatrial Node Development Reveals Genetic Determinants of Heart Rate and Arrhythmia Susceptibility. | Engel, James L; Zhang, Xianglong; Lu, Daniel R; Vila, Olaia F; Arias, Vanessa; Lee, Jasper; Hale, Christopher; Hsu, Yi-Hsiang; Li, Chi-Ming; Wu, Roland S; Vedantham, Vasanth; Ang, Yen-Sin | bioRxiv : the preprint server for biology | 37425707 | 2023 Sep 02 |
| Sequence basis of transcription initiation in human genome. | Dudnyk, Kseniia; Shi, Chenlai; Zhou, Jian | bioRxiv : the preprint server for biology | 37425823 | 2023 Jun 29 |
| Cyclin E/CDK2 and feedback from soluble histone protein regulate the S phase burst of histone biosynthesis. | Armstrong, Claire; Passanisi, Victor J; Ashraf, Humza M; Spencer, Sabrina L | Cell reports | 37428633 | 2023 Jul 25 |
| Synthesizing a Smarter CAR T Cell: Advanced Engineering of T-cell Immunotherapies. | Zhu, Iowis; Piraner, Dan I; Roybal, Kole T | Cancer immunology research | 37429007 | 2023 Aug 03 |
| Regular rhythmic primes improve sentence repetition in children with developmental language disorder. | Fiveash, Anna; Ladányi, Enikő; Camici, Julie; Chidiac, Karen; Bush, Catherine T; Canette, Laure-Hélène; Bedoin, Nathalie; Gordon, Reyna L; Tillmann, Barbara | NPJ science of learning | 37429839 | 2023 Jul 10 |
| Using a Video Game Intervention to Increase Hospitalists' Advance Care Planning Conversations with Older Adults: a Stepped Wedge Randomized Clinical Trial. | Mohan, Deepika; O'Malley, A James; Chelen, Julia; MacMartin, Meredith; Murphy, Megan; Rudolph, Mark; Engel, Jaclyn A; Barnato, Amber E | Journal of general internal medicine | 37429972 | 2023 Nov |
| Targeted Nanocarriers Co-Opting Pulmonary Intravascular Leukocytes for Drug Delivery to the Injured Brain. | Nong, Jia; Glassman, Patrick M; Myerson, Jacob W; Zuluaga-Ramirez, Viviana; Rodriguez-Garcia, Alba; Mukalel, Alvin; Omo-Lamai, Serena; Walsh, Landis R; Zamora, Marco E; Gong, Xijing; Wang, Zhicheng; Bhamidipati, Kartik; Kiseleva, Raisa Y; Villa, Carlos H; Greineder, Colin Fred; Kasner, Scott E; Weissman, Drew; Mitchell, Michael J; Muro, Silvia; Persidsky, Yuri; Brenner, Jacob Samuel; Muzykantov, Vladimir R; Marcos-Contreras, Oscar A | ACS nano | 37432926 | 2023 Jul 25 |
| General features of transmembrane beta barrels from a large database. | Montezano, Daniel; Bernstein, Rebecca; Copeland, Matthew M; Slusky, Joanna S G | Proceedings of the National Academy of Sciences of the United States of America | 37432995 | 2023 Jul 18 |
| A method for defining tissue injury criteria reveals that ligament deformation thresholds are multimodal. | Luetkemeyer, Callan M; Neu, Corey P; Calve, Sarah | Acta biomaterialia | 37433358 | 2023 Sep 15 |
| Scaling biological discovery at the interface of deep learning and cellular imaging. | Schwartz, Morgan; Israel, Uriah; Wang, Xuefei Julie; Laubscher, Emily; Yu, Changhua; Dilip, Rohit; Li, Qilin; Mari, Joud; Soro, Johnathon; Yu, Kevin; Pradhan, Elora; Ates, Ada; Gallandt, Danielle; Barnowski, Ross; Pao, Edward; Van Valen, David | Nature methods | 37434003 | 2023 Jul |
| A framework for individualized splice-switching oligonucleotide therapy. | Kim, Jinkuk; Woo, Sijae; de Gusmao, Claudio M; Zhao, Boxun; Chin, Diana H; DiDonato, Renata L; Nguyen, Minh A; Nakayama, Tojo; Hu, Chunguang April; Soucy, Aubrie; Kuniholm, Ashley; Thornton, Jennifer Karlin; Riccardi, Olivia; Friedman, Danielle A; El Achkar, Christelle Moufawad; Dash, Zane; Cornelissen, Laura; Donado, Carolina; Faour, Kamli N W; Bush, Lynn W; Suslovitch, Victoria; Lentucci, Claudia; Park, Peter J; Lee, Eunjung Alice; Patterson, Al; Philippakis, Anthony A; Margus, Brad; Berde, Charles B; Yu, Timothy W | Nature | 37438524 | 2023 Jul |
| RHINO directs MMEJ to repair DNA breaks in mitosis. | Brambati, Alessandra; Sacco, Olivia; Porcella, Sarina; Heyza, Joshua; Kareh, Mike; Schmidt, Jens C; Sfeir, Agnel | Science (New York, N.Y.) | 37440612 | 2023 Aug 11 |
| A Bayesian nonparametric analysis for zero-inflated multivariate count data with application to microbiome study. | Shuler, Kurtis; Verbanic, Samuel; Chen, Irene A; Lee, Juhee | Journal of the Royal Statistical Society. Series C, Applied statistics | 37440868 | 2021 Aug |
| Bubble-pen lithography: Fundamentals and applications: Nanoscience: Special Issue Dedicated to Professor Paul S. Weiss. | Kollipara, Pavana Siddhartha; Mahendra, Ritvik; Li, Jingang; Zheng, Yuebing | Aggregate (Hoboken, N.J.) | 37441005 | 2022 Aug |
| Structure and DNA-bridging activity of the essential Rec114-Mei4 trimer interface. | Liu, Kaixian; Grasso, Emily M; Pu, Stephen; Zou, Mengyang; Liu, Shixin; Eliezer, David; Keeney, Scott | Genes & development | 37442580 | 2023 Jun 01 |
| Leveraging polygenic enrichments of gene features to predict genes underlying complex traits and diseases. | Weeks, Elle M; Ulirsch, Jacob C; Cheng, Nathan Y; Trippe, Brian L; Fine, Rebecca S; Miao, Jenkai; Patwardhan, Tejal A; Kanai, Masahiro; Nasser, Joseph; Fulco, Charles P; Tashman, Katherine C; Aguet, Francois; Li, Taibo; Ordovas-Montanes, Jose; Smillie, Ch | Nature genetics | 37443254 | 2023 Aug |
| Co-Targeting FASN and mTOR Suppresses Uveal Melanoma Growth. | Han, Anna; Mukha, Dzmitry; Chua, Vivian; Purwin, Timothy J; Tiago, Manoela; Modasia, Bhavik; Baqai, Usman; Aumiller, Jenna L; Bechtel, Nelisa; Hunter, Emily; Danielson, Meggie; Terai, Mizue; Wedegaertner, Philip B; Sato, Takami; Landreville, Solange; Davies, Michael A; Kurtenbach, Stefan; Harbour, J William; Schug, Zachary T; Aplin, Andrew E | Cancers | 37444561 | 2023 Jun 30 |
| The Yin and Yang of Breast Cancer: Ion Channels as Determinants of Left-Right Functional Differences. | Masuelli, Sofía; Real, Sebastián; McMillen, Patrick; Oudin, Madeleine; Levin, Michael; Roqué, María | International journal of molecular sciences | 37446299 | 2023 Jul 05 |
| Applications of CRISPR technology in cellular immunotherapy. | Zhou, Xiaoyu; Renauer, Paul A; Zhou, Liqun; Fang, Shao-Yu; Chen, Sidi | Immunological reviews | 37449673 | 2023 Nov |
| Gluten induces rapid reprogramming of natural memory αβ and γδ intraepithelial T cells to induce cytotoxicity in celiac disease. | Kornberg, Adam; Botella, Theo; Moon, Christine S; Rao, Samhita; Gelbs, Jared; Cheng, Liang; Miller, Jonathan; Bacarella, Alyssa M; García-Vilas, Javier A; Vargas, Justin; Yu, Xuechen; Krupska, Izabela; Bush, Erin; Garcia-Carrasquillo, Reuben; Lebwohl, Benjamin; Krishnareddy, Suneeta; Lewis, Suzanne; Green, Peter H R; Bhagat, Govind; Yan, Kelley S; Han, Arnold | Science immunology | 37450575 | 2023 Jul 21 |
| HypoRiPPAtlas as an Atlas of hypothetical natural products for mass spectrometry database search. | Lee, Yi-Yuan; Guler, Mustafa; Chigumba, Desnor N; Wang, Shen; Mittal, Neel; Miller, Cameron; Krummenacher, Benjamin; Liu, Haodong; Cao, Liu; Kannan, Aditya; Narayan, Keshav; Slocum, Samuel T; Roth, Bryan L; Gurevich, Alexey; Behsaz, Bahar; Kersten, Roland D; Mohimani, Hosein | Nature communications | 37452020 | 2023 Jul 14 |
| Ionizable Lipid Nanoparticles for Therapeutic Base Editing of Congenital Brain Disease. | Palanki, Rohan; Bose, Sourav K; Dave, Apeksha; White, Brandon M; Berkowitz, Cara; Luks, Valerie; Yaqoob, Fazeela; Han, Emily; Swingle, Kelsey L; Menon, Pallavi; Hodgson, Emily; Biswas, Arijit; Billingsley, Margaret M; Li, Li; Yiping, Fan; Carpenter, Marco; Trokhan, Alexandra; Yeo, Julie; Johana, Nuryanti; Wan, Tan Yi; Alameh, Mohamad-Gabriel; Bennett, Frederick Chris; Storm, Phillip B; Jain, Rajan; Chan, Jerry; Weissman, Drew; Mitchell, Michael J; Peranteau, William H | ACS nano | 37458484 | 2023 Jul 25 |
| Defining and Studying B Cell Receptor and TCR Interactions. | Rappazzo, C Garrett; Fernández-Quintero, Monica L; Mayer, Andreas; Wu, Nicholas C; Greiff, Victor; Guthmiller, Jenna J | Journal of immunology (Baltimore, Md. : 1950) | 37459189 | 2023 Aug 01 |
| Sperm chromatin structure and reproductive fitness are altered by substitution of a single amino acid in mouse protamine 1. | Moritz, Lindsay; Schon, Samantha B; Rabbani, Mashiat; Sheng, Yi; Agrawal, Ritvija; Glass-Klaiber, Juniper; Sultan, Caleb; Camarillo, Jeannie M; Clements, Jourdan; Baldwin, Michael R; Diehl, Adam G; Boyle, Alan P; O'Brien, Patrick J; Ragunathan, Kaushik; Hu, Yueh-Chiang; Kelleher, Neil L; Nandakumar, Jayakrishnan; Li, Jun Z; Orwig, Kyle E; Redding, Sy; Hammoud, Saher Sue | Nature structural & molecular biology | 37460896 | 2023 Aug |
| Barcoding of episodic memories in the hippocampus of a food-caching bird. | Chettih, Selmaan N; Mackevicius, Emily L; Hale, Stephanie; Aronov, Dmitriy | bioRxiv : the preprint server for biology | 37461442 | 2023 Jul 03 |
| Stringent and complex sequence constraints of an IGHV1-69 broadly neutralizing antibody to influenza HA stem. | Teo, Qi Wen; Wang, Yiquan; Lv, Huibin; Tan, Timothy J C; Lei, Ruipeng; Mao, Kevin J; Wu, Nicholas C | bioRxiv : the preprint server for biology | 37461670 | 2023 Jul 06 |
| Double and triple thermodynamic mutant cycles reveal the basis for specific MsbA-lipid interactions. | Lyu, Jixing; Zhang, Tianqi; Marty, Michael T; Clemmer, David; Russell, David H; Laganowsky, Arthur | bioRxiv : the preprint server for biology | 37461710 | 2023 Nov 06 |
| A Roadmap for Three-Dimensional Analysis of the Intact Mouse Ovary. | Soygur, Bikem; Foecke, Mariko H; Gaylord, Eliza A; Fries, Adam; Li, Jing; Arora, Ripla; Laird, Diana J | Methods in molecular biology (Clifton, N.J.) | 37464244 | 2023 |
| Cavefish mount a rapid and sustained regenerative response following skeletal muscle injury. | Olsen, Luke; Hassan, Huzaifa; Xia, Fanning; Keaton, Sarah; Rohner, Nicolas | Zoological research | 37464934 | 2023 Jul 18 |
| Gradient-mixing LEGO robots for purifying DNA origami nanostructures of multiple components by rate-zonal centrifugation. | Sentosa, Jason; Djutanta, Franky; Horne, Brian; Showkeir, Dominic; Rezvani, Robert; Leff, Chloe; Pradhan, Swechchha; Hariadi, Rizal F | PloS one | 37467178 | 2023 |
| Live cell single-molecule imaging to study DNA repair in human cells. | Heyza, Joshua R; Mikhova, Mariia; Schmidt, Jens C | DNA repair | 37467632 | 2023 Sep |
| Secretion-Catalyzed Assembly of Protein Biomaterials on a Bacterial Membrane Surface. | Xie, Qi; On Lee, Sea; Vissamsetti, Nitya; Guo, Sikao; Johnson, Margaret E; Fried, Stephen D | Angewandte Chemie (International ed. in English) | 37469298 | 2023 Sep 11 |
| BayesTME: An end-to-end method for multiscale spatial transcriptional profiling of the tissue microenvironment. | Zhang, Haoran; Hunter, Miranda V; Chou, Jacqueline; Quinn, Jeffrey F; Zhou, Mingyuan; White, Richard M; Tansey, Wesley | Cell systems | 37473731 | 2023 Jul 19 |
| Placental drug transport and fetal exposure during pregnancy is determined by drug molecular size, chemistry, and conformation. | Fein, Katherine C; Arral, Mariah L; Kim, Julie S; Newby, Alexandra N; Whitehead, Kathryn A | Journal of controlled release : official journal of the Controlled Release Society | 37473809 | 2023 Sep |
| Electrochemical and electrophysiological considerations for clinical high channel count neural interfaces. | Vatsyayan, Ritwik; Lee, Jihwan; Bourhis, Andrew M; Tchoe, Youngbin; Cleary, Daniel R; Tonsfeldt, Karen J; Lee, Keundong; Montgomery-Walsh, Rhea; Paulk, Angelique C; U, Hoi Sang; Cash, Sydney S; Dayeh, Shadi A | MRS bulletin | 37476355 | 2023 May |
| Fine scale human mobility changes within 26 US cities in 2020 in response to the COVID-19 pandemic were associated with distance and income. | Arambepola, Rohan; Schaber, Kathryn L; Schluth, Catherine; Huang, Angkana T; Labrique, Alain B; Mehta, Shruti H; Solomon, Sunil S; Cummings, Derek A T; Wesolowski, Amy | PLOS global public health | 37478056 | 2023 |
| Localization of the Drosophila pioneer factor GAF to subnuclear foci is driven by DNA binding and required to silence satellite repeat expression. | Gaskill, Marissa M; Soluri, Isabella V; Branks, Annemarie E; Boka, Alan P; Stadler, Michael R; Vietor, Katherine; Huang, Hao-Yu S; Gibson, Tyler J; Mukherjee, Apratim; Mir, Mustafa; Blythe, Shelby A; Harrison, Melissa M | Developmental cell | 37478844 | 2023 Sep 11 |
| Microtubule nucleation for spindle assembly: one molecule at a time. | Kraus, Jodi; Alfaro-Aco, Raymundo; Gouveia, Bernardo; Petry, Sabine | Trends in biochemical sciences | 37482516 | 2023 Sep |
| Prediction of risk for myeloid malignancy in clonal hematopoiesis. | Weeks, Lachelle D; Niroula, Abhishek; Neuberg, Donna; Wong, Waihay; Lindsley, R Coleman; Luskin, Marlise; Berliner, Nancy; Stone, Richard M; DeAngelo, Daniel J; Soiffer, Robert; Uddin, Md Mesbah; Griffin, Gabriel; Vlasschaert, Caitlyn; Gibson, Christopher J; Jaiswal, Siddhartha; Bick, Alexander G; Malcovati, Luca; Natarajan, Pradeep; Ebert, Benjamin L | NEJM evidence | 37483562 | 2023 May |
| Nanobio Interface Between Proteins and 2D Nanomaterials. | Roy, Shounak; Aastha; Deo, Kaivalya A; Dey, Kashmira; Gaharwar, Akhilesh K; Jaiswal, Amit | ACS applied materials & interfaces | 37487195 | 2023 Aug 02 |
| Mechanical transmission of dengue virus by Aedes aegypti may influence disease transmission dynamics during outbreaks. | Li, Hsing-Han; Su, Matthew P; Wu, Shih-Cheng; Tsou, Hsiao-Hui; Chang, Meng-Chun; Cheng, Yu-Chieh; Tsai, Kuen-Nan; Wang, Hsin-Wei; Chen, Guan-Hua; Tang, Cheng-Kang; Chung, Pei-Jung; Tsai, Wan-Ting; Huang, Li-Rung; Yueh, Yueh Andrew; Chen, Hsin-Wei; Pan, Chao-Ying; Akbari, Omar S; Chang, Hsiao-Han; Yu, Guann-Yi; Marshall, John M; Chen, Chun-Hong | EBioMedicine | 37487418 | 2023 Aug |
| Feasibility and Validity of the Coma Recovery Scale-Revised for Accelerated Standardized Testing: A Practical Assessment Tool for Detecting Consciousness in the Intensive Care Unit. | Bodien, Yelena G; Vora, Isha; Barra, Alice; Chiang, Kevin; Chatelle, Camille; Goostrey, Kelsey; Martens, Geraldine; Malone, Christopher; Mello, Jennifer; Parlman, Kristin; Ranford, Jessica; Sterling, Ally; Waters, Abigail B; Hirschberg, Ronald; Katz, Douglas I; Mazwi, Nicole; Ni, Pengsheng; Velmahos, George; Waak, Karen; Edlow, Brian L; Giacino, Joseph T | Annals of neurology | 37488068 | 2023 Nov |
| N6-adenosine methylation controls the translation of insulin mRNA. | Wilinski, Daniel; Dus, Monica | Nature structural & molecular biology | 37488356 | 2023 Sep |
| Continuous odor profile monitoring to study olfactory navigation in small animals. | Chen, Kevin S; Wu, Rui; Gershow, Marc H; Leifer, Andrew M | eLife | 37489570 | 2023 Jul 25 |
| Toward the clinical development of synthetic immunity to cancer. | Garcia, Julie M; Burnett, Cassandra E; Roybal, Kole T | Immunological reviews | 37491719 | 2023 Nov |
| Achieving tissue-level softness on stretchable electronics through a generalizable soft interlayer design. | Li, Yang; Li, Nan; Liu, Wei; Prominski, Aleksander; Kang, Seounghun; Dai, Yahao; Liu, Youdi; Hu, Huawei; Wai, Shinya; Dai, Shilei; Cheng, Zhe; Su, Qi; Cheng, Ping; Wei, Chen; Jin, Lihua; Hubbell, Jeffrey A; Tian, Bozhi; Wang, Sihong | Nature communications | 37495580 | 2023 Jul 26 |
| Rapid genetic screening with high quality factor metasurfaces. | Hu, Jack; Safir, Fareeha; Chang, Kai; Dagli, Sahil; Balch, Halleh B; Abendroth, John M; Dixon, Jefferson; Moradifar, Parivash; Dolia, Varun; Sahoo, Malaya K; Pinsky, Benjamin A; Jeffrey, Stefanie S; Lawrence, Mark; Dionne, Jennifer A | Nature communications | 37495593 | 2023 Jul 26 |
| Breaking enhancers to gain insights into developmental defects. | Armendariz, Daniel A; Sundarrajan, Anjana; Hon, Gary C | eLife | 37497775 | 2023 Jul 27 |
| Genetic modification of inflammation- and clonal hematopoiesis-associated cardiovascular risk. | Yu, Zhi; Fidler, Trevor P; Ruan, Yunfeng; Vlasschaert, Caitlyn; Nakao, Tetsushi; Uddin, Md Mesbah; Mack, Taralynn; Niroula, Abhishek; Heimlich, J Brett; Zekavat, Seyedeh M; Gibson, Christopher J; Griffin, Gabriel K; Wang, Yuxuan; Peloso, Gina M; Heard-Cos | The Journal of clinical investigation | 37498674 | 2023 Sep 15 |
| The intensities of canonical senescence biomarkers integrate the duration of cell-cycle withdrawal. | Ashraf, Humza M; Fernandez, Brianna; Spencer, Sabrina L | Nature communications | 37500655 | 2023 Jul 27 |
| CTLA-4 tail fusion enhances CAR-T antitumor immunity. | Zhou, Xiaoyu; Cao, Hanbing; Fang, Shao-Yu; Chow, Ryan D; Tang, Kaiyuan; Majety, Medha; Bai, Meizhu; Dong, Matthew B; Renauer, Paul A; Shang, Xingbo; Suzuki, Kazushi; Levchenko, Andre; Chen, Sidi | Nature immunology | 37500885 | 2023 Sep |
| Hypnotic treatment reverses NREM sleep disruption and EEG desynchronization in a mouse model of Fragile X syndrome to rescue memory consolidation deficits. | Martinez, Jessy D; Wilson, Lydia G; Brancaleone, William P; Peterson, Kathryn G; Popke, Donald S; Garzon, Valentina Caicedo; Perez Tremble, Roxanne E; Donnelly, Marcus J; Mendez Ortega, Stephany L; Torres, Daniel; Shaver, James J; Clawson, Brittany C; Jia | bioRxiv : the preprint server for biology | 37502832 | 2023 Jul 18 |
| A cortical information bottleneck during decision-making. | Kleinman, Michael; Wang, Tian; Xiao, Derek; Feghhi, Ebrahim; Lee, Kenji; Carr, Nicole; Li, Yuke; Hadidi, Nima; Chandrasekaran, Chandramouli; Kao, Jonathan C | bioRxiv : the preprint server for biology | 37502862 | 2023 Jul 14 |
| PyLabRobot: An Open-Source, Hardware Agnostic Interface for Liquid-Handling Robots and Accessories. | Wierenga, Rick P; Golas, Stefan; Ho, Wilson; Coley, Connor; Esvelt, Kevin M | bioRxiv : the preprint server for biology | 37502883 | 2023 Jul 15 |
| LEF1 isoforms regulate cellular senescence and aging. | Jia, Minxue; Sayed, Khaled; Kapetanaki, Maria G; Dion, William; Rosas, Lorena; Irfan, Saad; Valenzi, Eleanor; Mora, Ana L; Lafyatis, Robert A; Rojas, Mauricio; Zhu, Bokai; Benos, Panayiotis V | bioRxiv : the preprint server for biology | 37502913 | 2023 Jul 21 |
| Sustaining wakefulness: Brainstem connectivity in human consciousness. | Edlow, Brian L; Olchanyi, Mark; Freeman, Holly J; Li, Jian; Maffei, Chiara; Snider, Samuel B; Zöllei, Lilla; Iglesias, J Eugenio; Augustinack, Jean; Bodien, Yelena G; Haynes, Robin L; Greve, Douglas N; Diamond, Bram R; Stevens, Allison; Giacino, Joseph T; Destrieux, Christophe; van der Kouwe, Andre; Brown, Emery N; Folkerth, Rebecca D; Fischl, Bruce; Kinney, Hannah C | bioRxiv : the preprint server for biology | 37502983 | 2023 Jul 15 |
| Simultaneous multi-site editing of individual genomes using retron arrays. | González-Delgado, Alejandro; Lopez, Santiago C; Rojas-Montero, Matías; Fishman, Chloe B; Shipman, Seth L | bioRxiv : the preprint server for biology | 37503029 | 2023 Jul 17 |
| Multidimensional super-resolution microscopy unveils nanoscale surface aggregates in the aging of FUS condensates. | He, Changdong; Wu, Chun Ying; Li, Wan; Xu, Ke | bioRxiv : the preprint server for biology | 37503034 | 2023 Jul 12 |
| Mechanism of target site selection by type V-K CRISPR-associated transposases. | George, Jerrin Thomas; Acree, Christopher; Park, Jung-Un; Kong, Muwen; Wiegand, Tanner; Pignot, Yanis Luca; Kellogg, Elizabeth H; Greene, Eric C; Sternberg, Samuel H | bioRxiv : the preprint server for biology | 37503092 | 2023 Jul 14 |
| Membrane mechanics dictate axonal morphology and function. | Griswold, Jacqueline M; Bonilla-Quintana, Mayte; Pepper, Renee; Lee, Christopher T; Raychaudhuri, Sumana; Ma, Siyi; Gan, Quan; Syed, Sarah; Zhu, Cuncheng; Bell, Miriam; Suga, Mitsuo; Yamaguchi, Yuuki; Chéreau, Ronan; Nägerl, U Valentin; Knott, Graham; Rangamani, Padmini; Watanabe, Shigeki | bioRxiv : the preprint server for biology | 37503105 | 2023 Jul 21 |
| The Brain Electroencephalogram Microdisplay for Precision Neurosurgery. | Tchoe, Youngbin; Wu, Tianhai; U, Hoi Sang; Roth, David M; Kim, Dongwoo; Lee, Jihwan; Cleary, Daniel R; Pizarro, Patricia; Tonsfeldt, Karen J; Lee, Keundong; Chen, Po Chun; Bourhis, Andrew M; Galton, Ian; Coughlin, Brian; Yang, Jimmy C; Paulk, Angelique C; Halgren, Eric; Cash, Sydney S; Dayeh, Shadi A | bioRxiv : the preprint server for biology | 37503216 | 2023 Jul 21 |
| Cell-type-specific disruption of cortico-striatal circuitry drives repetitive patterns of behavior in fragile X syndrome model mice. | Longo, Francesco; Aryal, Sameer; Anastasiades, Paul G; Maltese, Marta; Baimel, Corey; Albanese, Federica; Tabor, Joanna; Zhu, Jeffrey D; Oliveira, Mauricio M; Gastaldo, Denise; Bagni, Claudia; Santini, Emanuela; Tritsch, Nicolas X; Carter, Adam G; Klann, Eric | Cell reports | 37505982 | 2023 Aug 29 |
| A High-Throughput Colocalization Pipeline for Quantification of Mitochondrial Targeting across Different Protein Types. | Lear, Sierra K; Nunez, Jose A; Shipman, Seth L | ACS synthetic biology | 37506292 | 2023 Aug 18 |
| Rational engineering of an improved adenosine deaminase 2 enzyme for weaponizing T-cell therapies. | Cox, J R; Jennings, M; Lenahan, C; Manion, M; Courville, S; Blazeck, J | Immuno-oncology technology | 37519414 | 2023 Sep |
| High-performance neural population dynamics modeling enabled by scalable computational infrastructure. | Patel, Aashish N; Sedler, Andrew R; Huang, Jingya; Pandarinath, Chethan; Gilja, Vikash | Journal of open source software | 37520691 | 2023 |
| Unlocking the secrets of ABEs: the molecular mechanism behind their specificity. | Chen, Xiaoyu; McAndrew, Mitchell J; Lapinaite, Audrone | Biochemical Society transactions | 37526140 | 2023 Aug 31 |
| Repeat polymorphisms underlie top genetic risk loci for glaucoma and colorectal cancer. | Mukamel, Ronen E; Handsaker, Robert E; Sherman, Maxwell A; Barton, Alison R; Hujoel, Margaux L A; McCarroll, Steven A; Loh, Po-Ru | Cell | 37527660 | 2023 Aug 17 |
| A multiplexed bacterial two-hybrid for rapid characterization of protein-protein interactions and iterative protein design. | Boldridge, W Clifford; Ljubetič, Ajasja; Kim, Hwangbeom; Lubock, Nathan; Szilágyi, Dániel; Lee, Jonathan; Brodnik, Andrej; Jerala, Roman; Kosuri, Sriram | Nature communications | 37532706 | 2023 Aug 02 |
| High-throughput bioprinting of the nasal epithelium using patient-derived nasal epithelial cells. | Deniz Derman, I; Yeo, Miji; Castaneda, Diana Cadena; Callender, Megan; Horvath, Mian; Mo, Zengshuo; Xiong, Ruoyun; Fleming, Elizabeth; Chen, Phylip; Peeples, Mark E; Palucka, Karolina; Oh, Julia; Ozbolat, Ibrahim T | Biofabrication | 37536321 | 2023 Aug 14 |
| WNTinib is a multi-kinase inhibitor with specificity against β-catenin mutant hepatocellular carcinoma. | Rialdi, Alex; Duffy, Mary; Scopton, Alex P; Fonseca, Frank; Zhao, Julia Nanyi; Schwarz, Megan; Molina-Sanchez, Pedro; Mzoughi, Slim; Arceci, Elisa; Abril-Fornaguera, Jordi; Meadows, Austin; Ruiz de Galarreta, Marina; Torre, Denis; Reyes, Kyna; Lim, Yan Ting; Rosemann, Felix; Khan, Zaigham M; Mohammed, Kevin; Wang, Xuedi; Yu, Xufen; Lakshmanan, Manikandan; Rajarethinam, Ravisankar; Tan, Soo Yong; Jin, Jian; Villanueva, Augusto; Michailidis, Eleftherios; De Jong, Ype P; Rice, Charles M; Marazzi, Ivan; Hasson, Dan; Llovet, Josep M; Sobota, Radoslaw M; Lujambio, Amaia; Guccione, Ernesto; Dar, Arvin C | Nature cancer | 37537299 | 2023 Aug |
| Orthogonal Design of Experiments for Engineering of Lipid Nanoparticles for mRNA Delivery to the Placenta. | Safford, Hannah C; Swingle, Kelsey L; Geisler, Hannah C; Hamilton, Alex G; Thatte, Ajay S; Ghalsasi, Aditi A; Billingsley, Margaret M; Alameh, Mohamad-Gabriel; Weissman, Drew; Mitchell, Michael J | Small (Weinheim an der Bergstrasse, Germany) | 37537704 | 2023 Aug 03 |
| Female naïve human pluripotent stem cells carry X chromosomes with Xa-like and Xi-like folding conformations. | Patterson, Benjamin; Yang, Bing; Tanaka, Yoshiaki; Kim, Kun-Yong; Cakir, Bilal; Xiang, Yangfei; Kim, Jonghun; Wang, Siyuan; Park, In-Hyun | Science advances | 37540754 | 2023 Aug 04 |
| DRG afferents that mediate physiologic and pathologic mechanosensation from the distal colon. | Wolfson, Rachel L; Abdelaziz, Amira; Rankin, Genelle; Kushner, Sarah; Qi, Lijun; Mazor, Ofer; Choi, Seungwon; Sharma, Nikhil; Ginty, David D | Cell | 37541195 | 2023 Aug 03 |
| PRC1 suppresses a female gene regulatory network to ensure testicular differentiation. | Maezawa, So; Yukawa, Masashi; Hasegawa, Kazuteru; Sugiyama, Ryo; Iizuka, Mizuho; Hu, Mengwen; Sakashita, Akihiko; Vidal, Miguel; Koseki, Haruhiko; Barski, Artem; DeFalco, Tony; Namekawa, Satoshi H | Cell death & disease | 37542070 | 2023 Aug 04 |
| Autophagy collaborates with apoptosis pathways to control oligodendrocyte number. | Zhang, Tingxin; Bhambri, Aksheev; Zhang, Yihe; Barbosa, Daniela; Bae, Han-Gyu; Xue, Jumin; Wazir, Sabeen; Mulinyawe, Sara B; Kim, Jun Hee; Sun, Lu O | Cell reports | 37543947 | 2023 Aug 29 |
| A genome-wide single-cell 3D genome atlas of lung cancer progression. | Liu, Miao; Jin, Shengyan; Agabiti, Sherry S; Jensen, Tyler B; Yang, Tianqi; Radda, Jonathan S D; Ruiz, Christian F; Baldissera, Gabriel; Muzumdar, Mandar Deepak; Wang, Siyuan | bioRxiv : the preprint server for biology | 37546882 | 2023 Jul 24 |
| Bacterial cGAS-like enzymes produce 2',3'-cGAMP to activate an ion channel that restricts phage replication. | Tak, Uday; Walth, Peace; Whiteley, Aaron T | bioRxiv : the preprint server for biology | 37546940 | 2023 Jul 24 |
| Competition between stochastic neuropeptide signals calibrates the rate of satiation. | Zhang, Stephen X; Kim, Angela; Madara, Joseph C; Zhu, Paula K; Christenson, Lauren F; Lutas, Andrew; Kalugin, Peter N; Jin, Yihan; Pal, Akash; Tian, Lin; Lowell, Bradford B; Andermann, Mark L | Research square | 37546985 | 2023 Jul 26 |
| PMS1 as a target for splice modulation to prevent somatic CAG repeat expansion in Huntington's disease. | McLean, Zachariah L; Gao, Dadi; Correia, Kevin; Roy, Jennie C L; Shibata, Shota; Farnum, Iris N; Valdepenas-Mellor, Zoe; Rapuru, Manasa; Morini, Elisabetta; Ruliera, Jayla; Gillis, Tammy; Lucente, Diane; Kleinstiver, Benjamin P; Lee, Jong-Min; MacDonald, Marcy E; Wheeler, Vanessa C; Pinto, Ricardo Mouro; Gusella, James F | bioRxiv : the preprint server for biology | 37547003 | 2023 Jul 27 |
| Click display: a rapid and efficient in vitro protein display method for directed evolution. | Zeng, Yu; Woolley, Michael; Chockalingam, Karuppiah; Thomas, Benjamin; Arora, Srishtee; Hook, Magnus; Chen, Zhilei | Nucleic acids research | 37548398 | 2023 Sep 08 |
| An oncolytic virus-delivered TGFβ inhibitor overcomes the immunosuppressive tumor microenvironment. | DePeaux, Kristin; Rivadeneira, Dayana B; Lontos, Konstantinos; Dean, Victoria G; Gunn, William G; Watson, McLane J; Yao, Tianhong; Wilfahrt, Drew; Hinck, Cynthia; Wieteska, Lukasz; Thorne, Stephen H; Hinck, Andrew P; Delgoffe, Greg M | The Journal of experimental medicine | 37552475 | 2023 Oct 02 |
| Persistent cell contacts enable E-cadherin/HMR-1- and PAR-3-based symmetry breaking within a developing C. elegans epithelium. | Naturale, Victor F; Pickett, Melissa A; Feldman, Jessica L | Developmental cell | 37552986 | 2023 Oct 09 |
| G-quadruplexes associated with R-loops promote CTCF binding. | Wulfridge, Phillip; Yan, Qingqing; Rell, Nathaniel; Doherty, John; Jacobson, Skye; Offley, Sarah; Deliard, Sandra; Feng, Kelly; Phillips-Cremins, Jennifer E; Gardini, Alessandro; Sarma, Kavitha | Molecular cell | 37552993 | 2023 Sep 07 |
| GABA Regulates Electrical Activity and Tumor Initiation in Melanoma. | Tagore, Mohita; Hergenreder, Emiliano; Perlee, Sarah C; Cruz, Nelly M; Menocal, Laura; Suresh, Shruthy; Chan, Eric; Baron, Maayan; Melendez, Stephanie; Dave, Asim; Chatila, Walid K; Nsengimana, Jeremie; Koche, Richard P; Hollmann, Travis J; Ideker, Trey; Studer, Lorenz; Schietinger, Andrea; White, Richard M | Cancer discovery | 37553760 | 2023 Oct 05 |
| Topography of inputs into the hippocampal formation of a food-caching bird. | Applegate, Marissa C; Gutnichenko, Konstantin S; Aronov, Dmitriy | The Journal of comparative neurology | 37553864 | 2023 Nov |
| Throughput-scalable manufacturing of SARS-CoV-2 mRNA lipid nanoparticle vaccines. | Shepherd, Sarah J; Han, Xuexiang; Mukalel, Alvin J; El-Mayta, Rakan; Thatte, Ajay S; Wu, Jingyu; Padilla, Marshall S; Alameh, Mohamad-Gabriel; Srikumar, Neha; Lee, Daeyeon; Weissman, Drew; Issadore, David; Mitchell, Michael J | Proceedings of the National Academy of Sciences of the United States of America | 37556502 | 2023 Aug 15 |
| Technological advances in probing 4D genome organization. | Soroczynski, Jan; Risca, Viviana I | Current opinion in cell biology | 37556867 | 2023 Oct |
| Chemoproteomics Reveals Disruption of Metal Homeostasis and Metalloproteins by the Antibiotic Holomycin. | Chan, Andrew N; Chen, Xiaoyan; Falco, Julia A; Bak, Daniel W; Weerapana, Eranthie; Li, Bo | ACS chemical biology | 37561838 | 2023 Sep 15 |
| Bioadhesive polymer semiconductors and transistors for intimate biointerfaces. | Li, Nan; Li, Yang; Cheng, Zhe; Liu, Youdi; Dai, Yahao; Kang, Seounghun; Li, Songsong; Shan, Naisong; Wai, Shinya; Ziaja, Aidan; Wang, Yunfei; Strzalka, Joseph; Liu, Wei; Zhang, Cheng; Gu, Xiaodan; Hubbell, Jeffrey A; Tian, Bozhi; Wang, Sihong | Science (New York, N.Y.) | 37561870 | 2023 Aug 11 |
| Brain mitochondrial diversity and network organization predict anxiety-like behavior in male mice. | Rosenberg, Ayelet M; Saggar, Manish; Monzel, Anna S; Devine, Jack; Rogu, Peter; Limoges, Aaron; Junker, Alex; Sandi, Carmen; Mosharov, Eugene V; Dumitriu, Dani; Anacker, Christoph; Picard, Martin | Nature communications | 37563104 | 2023 Aug 10 |
| Bacterial amylases enable glycogen degradation by the vaginal microbiome. | Jenkins, Dominick J; Woolston, Benjamin M; Hood-Pishchany, M Indriati; Pelayo, Paula; Konopaski, Alyssa N; Quinn Peters, M; France, Michael T; Ravel, Jacques; Mitchell, Caroline M; Rakoff-Nahoum, Seth; Whidbey, Christopher; Balskus, Emily P | Nature microbiology | 37563289 | 2023 Sep |
| Dynamics of SLC25A51 reveal preference for oxidized NAD+ and substrate led transport. | Goyal, Shivansh; Paspureddi, Akhilesh; Lu, Mu-Jie; Chan, Hsin-Ru; Lyons, Scott N; Wilson, Crystal N; Niere, Marc; Ziegler, Mathias; Cambronne, Xiaolu A | EMBO reports | 37575034 | 2023 Oct 09 |
| Causal isotonic calibration for heterogeneous treatment effects. | van der Laan, Lars; Ulloa-Pérez, Ernesto; Carone, Marco; Luedtke, Alex | Proceedings of machine learning research | 37575467 | 2023 Jul |
| Engineered Vasculogenic Extracellular Vesicles Drive Nonviral Direct Conversions of Human Dermal Fibroblasts into Induced Endothelial Cells and Improve Wound Closure. | Rincon-Benavides, Maria A; Mendonca, Natalia Claire; Cuellar-Gaviria, Tatiana Z; Salazar-Puerta, Ana I; Ortega-Pineda, Lilibeth; Blackstone, Britani N; Deng, Binbin; McComb, David W; Gallego-Perez, Daniel; Powell, Heather M; Higuita-Castro, Natalia | Advanced therapeutics | 37577183 | 2023 Mar |
| Heterogeneity and Functional Analysis of Cardiac Fibroblasts in Heart Development. | Deng, Yiting; He, Yuanhang; Xu, Juan; He, Haoting; Li, Guang | bioRxiv : the preprint server for biology | 37577541 | 2023 Jul 31 |
| TWISP: A Transgenic Worm for Interrogating Signal Propagation in C. elegans. | Sharma, Anuj Kumar; Randi, Francesco; Kumar, Sandeep; Dvali, Sophie; Leifer, Andrew M | bioRxiv : the preprint server for biology | 37577580 | 2023 Aug 05 |
| A Taxonomically-informed Mass Spectrometry Search Tool for Microbial Metabolomics Data. | Zuffa, Simone; Schmid, Robin; Bauermeister, Anelize; Gomes, Paulo Wender P; Caraballo-Rodriguez, Andres M; Abiead, Yasin El; Aron, Allegra T; Gentry, Emily C; Zemlin, Jasmine; Meehan, Michael J; Avalon, Nicole E; Cichewicz, Robert H; Buzun, Ekaterina; Terrazas, Marvic Carrillo; Hsu, Chia-Yun; Oles, Renee; Ayala, Adriana Vasquez; Zhao, Jiaqi; Chu, Hiutung; Kuijpers, Mirte C M; Jackrel, Sara L; Tugizimana, Fidele; Nephali, Lerato Pertunia; Dubery, Ian A; Madala, Ntakadzeni Edwin; Moreira, Eduarda Antunes; Costa-Lotufo, Leticia Veras; Lopes, Norberto Peporine; Rezende-Teixeira, Paula; Jimenez, Paula C; Rimal, Bipin; Patterson, Andrew D; Traxler, Matthew F; de Cassia Pessotti, Rita; Alvarado-Villalobos, Daniel; Tamayo-Castillo, Giselle; Chaverri, Priscila; Escudero-Leyva, Efrain; Quiros-Guerrero, Luis-Manuel; Bory, Alexandre Jean; Joubert, Juliette; Rutz, Adriano; Wolfender, Jean-Luc; Allard, Pierre-Marie; Sichert, Andreas; Pontrelli, Sammy; Pullman, Benjamin S; Bandeira, Nuno; Gerwick, William H; Gindro, Katia; Massana-Codina, Josep; Wagner, Berenike C; Forchhammer, Karl; Petras, Daniel; Aiosa, Nicole; Garg, Neha; Liebeke, Manuel; Bourceau, Patric; Kang, Kyo Bin; Gadhavi, Henna; de Carvalho, Luiz Pedro Sorio; Dos Santos, Mariana Silva; Pérez-Lorente, Alicia Isabel; Molina-Santiago, Carlos; Romero, Diego; Franke, Raimo; Brönstrup, Mark; de León, Arturo Vera Ponce; Pope, Phillip Byron; Rosa, Sabina Leanti La; Barbera, Giorgia La; Roager, Henrik M; Laursen, Martin Frederik; Hammerle, Fabian; Siewert, Bianka; Peintner, Ursula; Licona-Cassani, Cuauhtemoc; Rodriguez-Orduña, Lorena; Rampler, Evelyn; Hildebrand, Felina; Koellensperger, Gunda; Schoeny, Harald; Hohenwallner, Katharina; Panzenboeck, Lisa; Gregor, Rachel; O'Neill, Ellis Charles; Roxborough, Eve Tallulah; Odoi, Jane; Bale, Nicole J; Ding, Su; Sinninghe Damsté, Jaap S; Guan, Xueli Li; Cui, Jerry J; Ju, Kou-San; Silva, Denise Brentan; Silva, Fernanda Motta Ribeiro; da Silva, Gilvan Ferreira; Koolen, Hector H F; Grundmann, Carlismari; Clement, Jason A; Mohimani, Hosein; Broders, Kirk; McPhail, Kerry L; Ober-Singleton, Sidnee E; Rath, Christopher M; McDonald, Daniel; Knight, Rob; Wang, Mingxun; Dorrestein, Pieter C | Research square | 37577622 | 2023 Aug 03 |
| Sensitization of meningeal afferents to locomotion-related meningeal deformations in a migraine model. | Blaeser, Andrew S; Zhao, Jun; Sugden, Arthur U; Carneiro-Nascimento, Simone; Andermann, Mark L; Levy, Dan | bioRxiv : the preprint server for biology | 37577675 | 2023 Nov 28 |
| Niclosamide potentiates TMEM16A and induces vasoconstriction. | Liang, Pengfei; Wan, Yui Chun S; Yu, Kuai; Hartzell, H Criss; Yang, Huanghe | bioRxiv : the preprint server for biology | 37577682 | 2023 Aug 02 |
| Focused ultrasound-mediated brain genome editing. | Lao, Yeh-Hsing; Ji, Robin; Zhou, Joyce K; Snow, Kathy J; Kwon, Nancy; Saville, Ethan; He, Siyu; Chauhan, Shradha; Chi, Chun-Wei; Datta, Malika S; Zhang, Hairong; Quek, Chai Hoon; Cai, S Sarah; Li, Mingqiang; Gaitan, Yaned; Bechtel, Lawrence; Wu, Shih-Ying; Lutz, Cathleen M; Tomer, Raju; Murray, Stephen A; Chavez, Alejandro; Konofagou, Elisa E; Leong, Kam W | Proceedings of the National Academy of Sciences of the United States of America | 37579143 | 2023 Aug 22 |
| Cross-attractor modeling of resting-state functional connectivity in psychiatric disorders. | Sun, Yinming; Zhang, Mengsen; Saggar, Manish | NeuroImage | 37579998 | 2023 Oct 01 |
| Correcting systematic errors in diffraction data with modern scaling algorithms. | Aldama, Luis A; Dalton, Kevin M; Hekstra, Doeke R | Acta crystallographica. Section D, Structural biology | 37584427 | 2023 Sep 01 |
| Mutations in human DNA methyltransferase DNMT1 induce specific genome-wide epigenomic and transcriptomic changes in neurodevelopment. | Davis, Kasey N; Qu, Ping-Ping; Ma, Shining; Lin, Ling; Plastini, Melanie; Dahl, Niklas; Plazzi, Giuseppe; Pizza, Fabio; O'Hara, Ruth; Wong, Wing Hung; Hallmayer, Joachim; Mignot, Emmanuel; Zhang, Xianglong; Urban, Alexander E | Human molecular genetics | 37584462 | 2023 Oct 17 |
| Dynamically Cross-Linked Granular Hydrogels for 3D Printing and Therapeutic Delivery. | Lee, Hung-Pang; Davis Jr, Ryan; Wang, Ting-Ching; Deo, Kaivalya A; Cai, Kathy Xiao; Alge, Daniel L; Lele, Tanmay P; Gaharwar, Akhilesh K | ACS applied bio materials | 37584641 | 2023 Sep 18 |
| Models for human telomere C-strand fill-in by CST-Polα-primase. | He, Qixiang; Lim, Ci Ji | Trends in biochemical sciences | 37586999 | 2023 Oct |
| Xiphoid nucleus of the midline thalamus controls cold-induced food seeking. | Lal, Neeraj K; Le, Phuong; Aggarwal, Samarth; Zhang, Alan; Wang, Kristina; Qi, Tianbo; Pang, Zhengyuan; Yang, Dong; Nudell, Victoria; Yeo, Gene W; Banks, Alexander S; Ye, Li | Nature | 37587337 | 2023 Sep |
| Neurofibromin 1 regulates early developmental sleep in Drosophila. | Durkin, Jaclyn; Poe, Amy R; Belfer, Samuel J; Rodriguez, Anyara; Tang, Si Hao; Walker, James A; Kayser, Matthew S | Neurobiology of sleep and circadian rhythms | 37593040 | 2023 Nov |
| Estimating the Efficiency Gain of Covariate-Adjusted Analyses in Future Clinical Trials Using External Data. | Li, Xiudi; Li, Sijia; Luedtke, Alex | Journal of the Royal Statistical Society. Series B, Statistical methodology | 37593690 | 2023 Apr |
| Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1. | Abini-Agbomson, Stephen; Gretarsson, Kristjan; Shih, Rochelle M; Hsieh, Laura; Lou, Tracy; De Ioannes, Pablo; Vasilyev, Nikita; Lee, Rachel; Wang, Miao; Simon, Matthew D; Armache, Jean-Paul; Nudler, Evgeny; Narlikar, Geeta; Liu, Shixin; Lu, Chao; Armache, Karim-Jean | Molecular cell | 37595555 | 2023 Aug 17 |
| Genetic dissection of crossover mutants defines discrete intermediates in mouse meiosis. | Premkumar, Tolkappiyan; Paniker, Lakshmi; Kang, Rhea; Biot, Mathilde; Humphrey, Ericka; Destain, Honorine; Ferranti, Isabella; Okulate, Iyinyeoluwa; Nguyen, Holly; Kilaru, Vindhya; Frasca, Melissa; Chakraborty, Parijat; Cole, Francesca | Molecular cell | 37595556 | 2023 Aug 17 |
| FAM120A couples SREBP-dependent transcription and splicing of lipogenesis enzymes downstream of mTORC1. | Cho, Sungyun; Chun, Yujin; He, Long; Ramirez, Cuauhtemoc B; Ganesh, Kripa S; Jeong, Kyungjo; Song, Junho; Cheong, Jin Gyu; Li, Zhongchi; Choi, Jungmin; Kim, Joohwan; Koundouros, Nikos; Ding, Fangyuan; Dephoure, Noah; Jang, Cholsoon; Blenis, John; Lee, Gina | Molecular cell | 37595559 | 2023 Aug 17 |
| RaMALDI: Enabling simultaneous Raman and MALDI imaging of the same tissue section. | Yang, Ethan; Kim, Jeong Hee; Tressler, Caitlin M; Shen, Xinyi Elaine; Brown, Dalton R; Johnson, Cole C; Hahm, Tae-Hun; Barman, Ishan; Glunde, Kristine | Biosensors & bioelectronics | 37597501 | 2023 Nov 01 |
| Modeling X-chromosome inactivation and reactivation during human development. | Khan, Shafqat A; Theunissen, Thorold W | Current opinion in genetics & development | 37597506 | 2023 Oct |
| Multiscale computational modeling of the effects of 2'-deoxy-ATP on cardiac muscle calcium handling. | Hock, Marcus T; Teitgen, Abigail E; McCabe, Kimberly J; Hirakis, Sophia P; Huber, Gary A; Regnier, Michael; Amaro, Rommie E; McCammon, J Andrew; McCulloch, Andrew D | Journal of applied physics | 37601331 | 2023 Aug 21 |
| Schizophrenia-associated somatic copy-number variants from 12,834 cases reveal recurrent NRXN1 and ABCB11 disruptions. | Maury, Eduardo A; Sherman, Maxwell A; Genovese, Giulio; Gilgenast, Thomas G; Kamath, Tushar; Burris, S J; Rajarajan, Prashanth; Flaherty, Erin; Akbarian, Schahram; Chess, Andrew; McCarroll, Steven A; Loh, Po-Ru; Phillips-Cremins, Jennifer E; Brennand, Kristen J; Macosko, Evan Z; Walters, James T R; O'Donovan, Michael; Sullivan, Patrick; Psychiatric Genomic Consortium Schizophrenia and CNV workgroup; Brain Somatic Mosaicism Network; Sebat, Jonathan; Lee, Eunjung A; Walsh, Christopher A | Cell genomics | 37601975 | 2023 Aug 09 |
| Ionizable Lipid Nanoparticles with Integrated Immune Checkpoint Inhibition for mRNA CAR T Cell Engineering. | Hamilton, Alex G; Swingle, Kelsey L; Joseph, Ryann A; Mai, David; Gong, Ningqiang; Billingsley, Margaret M; Alameh, Mohamad-Gabriel; Weissman, Drew; Sheppard, Neil C; June, Carl H; Mitchell, Michael J | Advanced healthcare materials | 37602495 | 2023 Dec |
| A Protease-Responsive Polymer/Peptide Conjugate and Reversible Assembly of Silver Clusters for the Detection of Porphyromonas gingivalis Enzymatic Activity. | Retout, Maurice; Amer, Lubna; Yim, Wonjun; Creyer, Matthew N; Lam, Benjamin; Trujillo, Diego F; Potempa, Jan; O'Donoghue, Anthony J; Chen, Casey; Jokerst, Jesse V | ACS nano | 37602819 | 2023 Sep 12 |
| Immune-infiltrated kidney organoid-on-chip model for assessing T cell bispecific antibodies. | Kroll, Katharina T; Mata, Mariana M; Homan, Kimberly A; Micallef, Virginie; Carpy, Alejandro; Hiratsuka, Ken; Morizane, Ryuji; Moisan, Annie; Gubler, Marcel; Walz, Antje-Christine; Marrer-Berger, Estelle; Lewis, Jennifer A | Proceedings of the National Academy of Sciences of the United States of America | 37603766 | 2023 Aug 29 |
| Base Editor Scanning Reveals Activating Mutations of DNMT3A. | Garcia, Emma M; Lue, Nicholas Z; Liang, Jessica K; Lieberman, Whitney K; Hwang, Derek D; Woods, James C; Liau, Brian B | ACS chemical biology | 37603861 | 2023 Sep 15 |
| A genome-wide atlas of human cell morphology. | Ramezani, Meraj; Bauman, Julia; Singh, Avtar; Weisbart, Erin; Yong, John; Lozada, Maria; Way, Gregory P; Kavari, Sanam L; Diaz, Celeste; Haghighi, Marzieh; Batista, Thiago M; Pérez-Schindler, Joaquín; Claussnitzer, Melina; Singh, Shantanu; Cimini, Beth A; Blainey, Paul C; Carpenter, Anne E; Jan, Calvin H; Neal, James T | bioRxiv : the preprint server for biology | 37609130 | 2023 Aug 07 |
| Environmental challenge rewires functional connections among human genes. | Herken, Benjamin W; Wong, Garrett T; Norman, Thomas M; Gilbert, Luke A | bioRxiv : the preprint server for biology | 37609173 | 2023 Aug 09 |
| Cell-type-specific plasticity shapes neocortical dynamics for motor learning. | Majumder, Shouvik; Hirokawa, Koichi; Yang, Zidan; Paletzki, Ronald; Gerfen, Charles R; Fontolan, Lorenzo; Romani, Sandro; Jain, Anant; Yasuda, Ryohei; Inagaki, Hidehiko K | bioRxiv : the preprint server for biology | 37609277 | 2023 Aug 14 |
| TOMOMAN: Streamlining Cryo-electron Tomography and Subtomogram Averaging Workflows Using TOMOgram MANager. | Khavnekar, Sagar; Erdmann, Philipp; Wan, William | Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada | 37613381 | 2023 Jul 22 |
| Elucidating the Mechanism of Phosphatidylserine Exposure During Ebola Virus Assembly. | Huth, Tyler; Wan, William | Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada | 37613461 | 2023 Jul 22 |
| Studying the Molecular Mechanisms of Ebola Virus with in situ Structural Biology. | Wan, William | Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada | 37613814 | 2023 Jul 22 |
| Towards the Visual Proteomics of C. reinhardtii using High-throughput Collaborative in situ Cryo-ET. | Khavnekar, Sagar; Kelley, Ron; Waltz, Florent; Wietrzynski, Wojciech; Zhang, Xianjun; Obr, Martin; Tagiltsev, Grigory; Beck, Florian; Wan, William; Briggs, John; Engel, Ben; Plitzko, Juergen; Kotecha, Abhay | Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada | 37613825 | 2023 Jul 22 |
| Predictors of Cognitive Change in Parkinson Disease: A 2-year Follow-up Study. | Gasca-Salas, Carmen; Duff-Canning, Sarah; McArthur, Eric; Armstrong, Melissa J; Fox, Susan; Meaney, Christopher A; Tang-Wai, David F; Gill, David; Eslinger, Paul J; Zadikoff, Cindy; Marshall, Fred J; Mapstone, Mark; Chou, Kelvin L; Persad, Carol; Litvan, Irene; Mast, Benjamin T; Gerstenecker, Adam T; Weintraub, Sandra; Marras, Connie | Alzheimer disease and associated disorders | 37615480 | 2023 Oct-Dec 01 |
| What is a minimal clinically important difference for clinical trials in patients with disorders of consciousness? a novel probabilistic approach. | Monti, Martin M; Spivak, Norman M; Edlow, Brian L; Bodien, Yelena G | PloS one | 37616196 | 2023 |
| Chronotate: An open-source tool for manual timestamping and quantification of animal behavior. | Philipsberg, Paul A; Christenson Wick, Zoé; Diego, Keziah S; Vaughan, Nick; Galas, Angelina; Jurkowski, Albert; Feng, Yu; Vetere, Lauren M; Chen, Lingxuan; Soler, Iván; Cai, Denise J; Shuman, Tristan | Neuroscience letters | 37619698 | 2023 Sep 25 |
| A FLEXIBLE BAYESIAN FRAMEWORK TO ESTIMATE AGE- AND CAUSE-SPECIFIC CHILD MORTALITY OVER TIME FROM SAMPLE REGISTRATION DATA. | Schumacher, Austin E; McCormick, Tyler H; Wakefield, Jon; Chu, Yue; Perin, Jamie; Villavicencio, Francisco; Simon, Noah; Liu, Li | The annals of applied statistics | 37621750 | 2022 Mar |
| Engineering Embden-Meyerhof-Parnas Glycolysis to Generate Noncanonical Reducing Power. | King, Edward; Cui, Youtian; Aspacio, Derek; Nicklen, Frances; Zhang, Linyue; Maxel, Sarah; Luo, Ray; Siegel, Justin B; Aitchison, Erick; Li, Han | ACS catalysis | 37622090 | 2022 Jul 15 |
| Germline-encoded specificities and the predictability of the B cell response. | Vieira, Marcos C; Palm, Anna-Karin E; Stamper, Christopher T; Tepora, Micah E; Nguyen, Khoa D; Pham, Tho D; Boyd, Scott D; Wilson, Patrick C; Cobey, Sarah | PLoS pathogens | 37624867 | 2023 Aug |
| Engineered Biocatalytic Synthesis of β-N-Substituted-α-Amino Acids. | Villalona, Jairo; Higgins, Peyton M; Buller, Andrew R | Angewandte Chemie (International ed. in English) | 37625129 | 2023 Oct 23 |
| Tuning Hsp104 specificity to selectively detoxify α-synuclein. | Mack, Korrie L; Kim, Hanna; Barbieri, Edward M; Lin, JiaBei; Braganza, Sylvanne; Jackrel, Meredith E; DeNizio, Jamie E; Yan, Xiaohui; Chuang, Edward; Tariq, Amber; Cupo, Ryan R; Castellano, Laura M; Caldwell, Kim A; Caldwell, Guy A; Shorter, James | Molecular cell | 37625404 | 2023 Sep 21 |
| The evolving landscape of immune-related adverse events that follow immune checkpoint immunotherapy in cancer patients. | Villani, Alexandra-Chloé | Immunological reviews | 37632320 | 2023 Sep |
| A comparative analysis of microglial inducible Cre lines. | Faust, Travis E; Feinberg, Philip A; O'Connor, Ciara; Kawaguchi, Riki; Chan, Andrew; Strasburger, Hayley; Frosch, Maximilian; Boyle, Margaret A; Masuda, Takahiro; Amann, Lukas; Knobeloch, Klaus-Peter; Prinz, Marco; Schaefer, Anne; Schafer, Dorothy P | Cell reports | 37635351 | 2023 Sep 26 |
| A Review of Current State-of-the-Art Control Methods for Lower-Limb Powered Prostheses. | Gehlhar, Rachel; Tucker, Maegan; Young, Aaron J; Ames, Aaron D | Annual reviews in control | 37635763 | 2023 |
| A Fluorescent Unnatural Mannosamine Derivative with Enhanced Emission Upon Complexation with Cucurbit[7]uril. | Kataki-Anastasakou, Anna; Jia, Shang; Axtell, Jonathan C; Sletten, Ellen M | Israel journal of chemistry | 37636996 | 2023 Feb |
| In Vivo, High-Throughput Selection of Thermostable Cyclohexanone Monooxygenase (CHMO). | Maxel, Sarah; Zhang, Linyue; King, Edward; Acosta, Ana Paula; Luo, Ray; Li, Han | Catalysts (Basel, Switzerland) | 37637965 | 2020 Aug |
| Intravital measurements of solid stresses in tumours reveal length-scale and microenvironmentally dependent force transmission. | Zhang, Sue; Grifno, Gabrielle; Passaro, Rachel; Regan, Kathryn; Zheng, Siyi; Hadzipasic, Muhamed; Banerji, Rohin; O'Connor, Logan; Chu, Vinson; Kim, Sung Yeon; Yang, Jiarui; Shi, Linzheng; Karrobi, Kavon; Roblyer, Darren; Grinstaff, Mark W; Nia, Hadi T | Nature biomedical engineering | 37640900 | 2023 Nov |
| Fluorogenic chemically induced dimerization. | Wang, Wenjing; Shen, Jiaqi | Nature methods | 37640937 | 2023 Oct |
| Joint single-cell profiling resolves 5mC and 5hmC and reveals their distinct gene regulatory effects. | Fabyanic, Emily B; Hu, Peng; Qiu, Qi; Berríos, Kiara N; Connolly, Daniel R; Wang, Tong; Flournoy, Jennifer; Zhou, Zhaolan; Kohli, Rahul M; Wu, Hao | Nature biotechnology | 37640946 | 2023 Aug 28 |
| Rapid model-guided design of organ-scale synthetic vasculature for biomanufacturing. | Sexton, Zachary A; Hudson, Andrew R; Herrmann, Jessica E; Shiwarski, Dan J; Pham, Jonathan; Szafron, Jason M; Wu, Sean M; Skylar-Scott, Mark; Feinberg, Adam W; Marsden, Alison | ArXiv | 37645046 | 2023 Aug 15 |
| DISSECTING TUMOR TRANSCRIPTIONAL HETEROGENEITY FROM SINGLE-CELL RNA-SEQ DATA BY GENERALIZED BINARY COVARIANCE DECOMPOSITION. | Liu, Yusha; Carbonetto, Peter; Willwerscheid, Jason; Oakes, Scott A; Macleod, Kay F; Stephens, Matthew | bioRxiv : the preprint server for biology | 37645713 | 2023 Aug 17 |
| Programmable multi-kilobase RNA editing using CRISPR-mediated trans-splicing. | Borrajo, Jacob; Javanmardi, Kamyab; Griffin, James; St Martin, Susan J; Yao, David; Hill, Kaisle; Blainey, Paul C; Al-Shayeb, Basem | bioRxiv : the preprint server for biology | 37645763 | 2023 Aug 18 |
| Serotonin neurons in mating female mice are activated by male ejaculation. | Troconis, Eileen L; Seo, Changwoo; Guru, Akash; Warden, Melissa R | bioRxiv : the preprint server for biology | 37645786 | 2023 Aug 19 |
| Endothelial TMEM16F lipid scramblase regulates angiogenesis. | Shan, Ke Zoe; Le, Trieu; Liang, Pengfei; Dong, Ping; Yang, Huanghe | bioRxiv : the preprint server for biology | 37645870 | 2023 Aug 20 |
| Ventromedial prefrontal parvalbumin neurons are necessary for initiating cued threat avoidance. | Ho, Yi-Yun; Yang, Qiuwei; Boddu, Priyanka; Bulkin, David A; Warden, Melissa R | bioRxiv : the preprint server for biology | 37645876 | 2023 Aug 18 |
| Cell arrangement impacts metabolic activity and antibiotic tolerance in Pseudomonas aeruginosa biofilms. | Dayton, Hannah; Kiss, Julie; Wei, Mian; Chauhan, Shradha; LaMarre, Emily; Cornell, William Cole; Morgan, Chase J; Janakiraman, Anuradha; Min, Wei; Tomer, Raju; Price-Whelan, Alexa; Nirody, Jasmine A; Dietrich, Lars E P | bioRxiv : the preprint server for biology | 37645902 | 2023 Aug 28 |
| Flexible regulation of representations on a drifting manifold enables long-term stable complex neuroprosthetic control. | Natraj, Nikhilesh; Seko, Sarah; Abiri, Reza; Yan, Hongyi; Graham, Yasmin; Tu-Chan, Adelyn; Chang, Edward F; Ganguly, Karunesh | bioRxiv : the preprint server for biology | 37645922 | 2023 Aug 14 |
| ICAM-1-decorated extracellular vesicles loaded with miR-146a and Glut1 drive immunomodulation and hinder tumor progression in a murine model of breast cancer. | Duarte-Sanmiguel, Silvia; Salazar-Puerta, Ana I; Panic, Ana; Dodd, Daniel; Francis, Carlie; Alzate-Correa, Diego; Ortega-Pineda, Lilibeth; Lemmerman, Luke; Rincon-Benavides, Maria A; Dathathreya, Kavya; Lawrence, William; Ott, Neil; Zhang, Jingjing; Deng, Binbin; Wang, Shipeng; Santander, Sandra P; McComb, David W; Reategui, Eduardo; Palmer, Andre F; Carson, William E; Higuita-Castro, Natalia; Gallego-Perez, Daniel | Biomaterials science | 37646133 | 2023 Oct 10 |
| Fluorosulfate as a Latent Sulfate in Peptides and Proteins. | Liu, Chao; Liu, Xueyi; Zhou, Mi; Xia, Chaoshuang; Lyu, Yuhan; Peng, Qianni; Soni, Chintan; Zhou, Zefeng; Su, Qiwen; Wu, Yujia; Weerapana, Eranthie; Gao, Jianmin; Chatterjee, Abhishek; Lin, Cheng; Niu, Jia | Journal of the American Chemical Society | 37647087 | 2023 Sep 20 |
| Strain-Inducing Positional Alkene Isomerization. | Palani, Vignesh; Wendlandt, Alison E | Journal of the American Chemical Society | 37647593 | 2023 Sep 13 |
| Decoding the obesity-cancer connection: lessons from preclinical models of pancreatic adenocarcinoma. | Ruiz, Christian F; Garcia, Cathy; Jacox, Jeremy B; Lawres, Lauren; Muzumdar, Mandar D | Life science alliance | 37648285 | 2023 Nov |
| iPSC motor neurons, but not other derived cell types, capture gene expression changes in postmortem sporadic ALS motor neurons. | Held, Aaron; Adler, Michelle; Marques, Christine; Reyes, Charles Jourdan; Kavuturu, Amey S; Quadros, Ana R A A; Ndayambaje, I Sandra; Lara, Erika; Ward, Michael; Lagier-Tourenne, Clotilde; Wainger, Brian J | Cell reports | 37651231 | 2023 Sep 26 |
| Regulation of gene editing using T-DNA concatenation. | Dickinson, Lauren; Yuan, Wenxin; LeBlanc, Chantal; Thomson, Geoffrey; Wang, Siyuan; Jacob, Yannick | Nature plants | 37653336 | 2023 Sep |
| MicroMagnify: A Multiplexed Expansion Microscopy Method for Pathogens and Infected Tissues. | Cheng, Zhangyu; Stefani, Caroline; Skillman, Thomas; Klimas, Aleksandra; Lee, Aramchan; DiBernardo, Emma F; Brown, Karina Mueller; Milman, Tatyana; Wang, Yuhong; Gallagher, Brendan R; Lagree, Katherine; Jena, Bhanu P; Pulido, Jose S; Filler, Scott G; Mitchell, Aaron P; Hiller, N Luisa; Lacy-Hulbert, Adam; Zhao, Yongxin | Advanced science (Weinheim, Baden-Wurttemberg, Germany) | 37658522 | 2023 Oct |
| The virus-induced cyclic dinucleotide 2'3'-c-di-GMP mediates STING-dependent antiviral immunity in Drosophila. | Cai, Hua; Li, Lihua; Slavik, Kailey M; Huang, Jingxian; Yin, Ting; Ai, Xianlong; Hédelin, Léna; Haas, Gabrielle; Xiang, Zhangmin; Yang, Yunyun; Li, Xiaoyan; Chen, Yuqiang; Wei, Ziming; Deng, Huimin; Chen, Di; Jiao, Renjie; Martins, Nelson; Meignin, Carine; Kranzusch, Philip J; Imler, Jean-Luc | Immunity | 37659413 | 2023 Sep 12 |
| Integrated high-confidence and high-throughput approaches for quantifying synapse engulfment by oligodendrocyte precursor cells. | Kahng, Jessica A; Xavier, Andre M; Ferro, Austin; Auguste, Yohan S S; Cheadle, Lucas | bioRxiv : the preprint server for biology | 37662250 | 2023 Aug 25 |
| A Biotin Targeting Chimera (BioTAC) System to Map Small Molecule Interactomes in situ. | Tao, Andrew J; Jiang, Jiewei; Gadbois, Gillian E; Goyal, Pavitra; Boyle, Bridget T; Mumby, Elizabeth J; Myers, Samuel A; English, Justin G; Ferguson, Fleur M | bioRxiv : the preprint server for biology | 37662262 | 2023 Aug 22 |
| Single Cell Transcriptome of Stress Vulnerability Network in mouse Prefrontal Cortex. | Hing, Benjamin; Mitchell, Sara B; Eberle, Maureen; Filali, Yassine; Hultman, Ian; Matkovich, Molly; Kasturirangan, Mukundan; Wyche, Whitney; Jimenez, Alli; Velamuri, Radha; Johnson, Micah; Srivastava, Sanvesh; Hultman, Rainbo | bioRxiv : the preprint server for biology | 37662266 | 2023 Aug 21 |
| Age and obesity-driven changes in the extracellular matrix of the primary tumor and metastatic site influence tumor invasion and metastatic outgrowth. | Conner, Sydney J; Guarin, Justinne R; Borges, Hannah B; Salhany Jr, Kenneth J; Mensah, Diamond N; Hamilton, Grace A; Le, Giang H; Oudin, Madeleine J | bioRxiv : the preprint server for biology | 37662270 | 2023 Aug 25 |
| Intersectin and Endophilin condensates prime synaptic vesicles for release site replenishment. | Ogunmowo, Tyler; Hoffmann, Christian; Pepper, Renee; Wang, Han; Gowrisankaran, Sindhuja; Ho, Annie; Raychaudhuri, Sumana; Cooper, Benjamin H; Milosevic, Ira; Milovanovic, Dragomir; Watanabe, Shigeki | bioRxiv : the preprint server for biology | 37662300 | 2023 Aug 23 |
| A parametrized two-domain thermodynamic model explains diverse mutational effects on protein allostery. | Liu, Zhuang; Gillis, Thomas; Raman, Srivatsan; Cui, Qiang | bioRxiv : the preprint server for biology | 37662419 | 2023 Aug 26 |
| Postural analysis reveals persistent changes in paper wasp foundress behavioral state after conspecific challenge. | Legan, Andrew W; Vogt, Caleb C; Sheehan, Michael J | Ecology and evolution | 37664514 | 2023 Sep |
| A cell wall synthase accelerates plasma membrane partitioning in mycobacteria. | Kado, Takehiro; Akbary, Zarina; Motooka, Daisuke; Sparks, Ian L; Melzer, Emily S; Nakamura, Shota; Rojas, Enrique R; Morita, Yasu S; Siegrist, M Sloan | eLife | 37665120 | 2023 Sep 04 |
| A Comprehensive Large Signal, Small Signal, and Noise Model for IGZO Thin Film Transistor Circuits. | Vatsyayan, Ritwik; Dayeh, Shadi A | IEEE transactions on electron devices | 37680851 | 2023 Sep |
| Developmental emergence of sleep rhythms enables long-term memory in Drosophila. | Poe, Amy R; Zhu, Lucy; Szuperak, Milan; McClanahan, Patrick D; Anafi, Ron C; Scholl, Benjamin; Thum, Andreas S; Cavanaugh, Daniel J; Kayser, Matthew S | Science advances | 37683005 | 2023 Sep 08 |
| Hormonal gatekeeping via the blood-brain barrier governs caste-specific behavior in ants. | Ju, Linyang; Glastad, Karl M; Sheng, Lihong; Gospocic, Janko; Kingwell, Callum J; Davidson, Shawn M; Kocher, Sarah D; Bonasio, Roberto; Berger, Shelley L | Cell | 37683635 | 2023 Sep 28 |
| 18S rRNA methyltransferases DIMT1 and BUD23 drive intergenerational hormesis. | Liberman, Noa; Rothi, M Hafiz; Gerashchenko, Maxim V; Zorbas, Christiane; Boulias, Konstantinos; MacWhinnie, Fiona G; Ying, Albert Kejun; Flood Taylor, Anya; Al Haddad, Joseph; Shibuya, Hiroki; Roach, Lara; Dong, Anna; Dellacona, Scarlett; Lafontaine, Denis L J; Gladyshev, Vadim N; Greer, Eric Lieberman | Molecular cell | 37689068 | 2023 Sep 21 |
| Transfer Learning with Kernel Methods. | Radhakrishnan, Adityanarayanan; Ruiz Luyten, Max; Prasad, Neha; Uhler, Caroline | Nature communications | 37689796 | 2023 Sep 09 |
| Shifting Redox Reaction Equilibria on Demand Using an Orthogonal Redox Cofactor. | Aspacio, Derek; Zhang, Yulai; Cui, Youtian; King, Edward; Black, William B; Perea, Sean; Luu, Emma; Siegel, Justin B; Li, Han | bioRxiv : the preprint server for biology | 37693387 | 2023 Aug 30 |
| Unravelling human hematopoietic progenitor cell diversity through association with intrinsic regulatory factors. | Favaro, Patricia; Glass, David R; Borges, Luciene; Baskar, Reema; Reynolds, Warren; Ho, Daniel; Bruce, Trevor; Tebaykin, Dmitry; Scanlon, Vanessa M; Shestopalov, Ilya; Bendall, Sean C | bioRxiv : the preprint server for biology | 37693547 | 2023 Aug 30 |
| Antimicrobial mitochondrial reactive oxygen species induction by lung epithelial immunometabolic modulation. | Wang, Yongxing; Kulkarni, Vikram V; Pantaleón García, Jezreel; Leiva-Juárez, Miguel M; Goldblatt, David L; Gulraiz, Fahad; Vila Ellis, Lisandra; Chen, Jichao; Longmire, Michael K; Donepudi, Sri Ramya; Lorenzi, Philip L; Wang, Hao; Wong, Lee-Jun; Tuvim, Michael J; Evans, Scott E | PLoS pathogens | 37695784 | 2023 Sep |
| Nucleosome density shapes kilobase-scale regulation by a mammalian chromatin remodeler. | Abdulhay, Nour J; Hsieh, Laura J; McNally, Colin P; Ostrowski, Megan S; Moore, Camille M; Ketavarapu, Mythili; Kasinathan, Sivakanthan; Nanda, Arjun S; Wu, Ke; Chio, Un Seng; Zhou, Ziling; Goodarzi, Hani; Narlikar, Geeta J; Ramani, Vijay | Nature structural & molecular biology | 37696956 | 2023 Oct |
| Chromatin loop dynamics during cellular differentiation are associated with changes to both anchor and internal regulatory features. | Bond, Marielle L; Davis, Eric S; Quiroga, Ivana Y; Dey, Anubha; Kiran, Manjari; Love, Michael I; Won, Hyejung; Phanstiel, Douglas H | Genome research | 37699658 | 2023 Aug |
| Noninvasive morpho-molecular imaging reveals early therapy-induced senescence in human cancer cells. | Bresci, Arianna; Kim, Jeong Hee; Ghislanzoni, Silvia; Manetti, Francesco; Wu, Lintong; Vernuccio, Federico; Ceconello, Chiara; Sorrentino, Salvatore; Barman, Ishan; Bongarzone, Italia; Cerullo, Giulio; Vanna, Renzo; Polli, Dario | Science advances | 37703362 | 2023 Sep 15 |
| Human OPRM1 and murine Oprm1 promoter driven viral constructs for genetic access to μ-opioidergic cell types. | Salimando, Gregory J; Tremblay, Sébastien; Kimmey, Blake A; Li, Jia; Rogers, Sophie A; Wojick, Jessica A; McCall, Nora M; Wooldridge, Lisa M; Rodrigues, Amrith; Borner, Tito; Gardiner, Kristin L; Jayakar, Selwyn S; Singeç, Ilyas; Woolf, Clifford J; Hayes, Matthew R; De Jonghe, Bart C; Bennett, F Christian; Bennett, Mariko L; Blendy, Julie A; Platt, Michael L; Creasy, Kate Townsend; Renthal, William R; Ramakrishnan, Charu; Deisseroth, Karl; Corder, Gregory | Nature communications | 37704594 | 2023 Sep 13 |
| Community-Level Risk Factors for Firearm Assault and Homicide: The Role of Local Firearm Dealers and Alcohol Outlets. | Pear, Veronica A; Wintemute, Garen J; Jewell, Nicholas P; Cerdá, Magdalena; Ahern, Jennifer | Epidemiology (Cambridge, Mass.) | 37708491 | 2023 Nov 01 |
| Crystal ribcage: a platform for probing real-time lung function at cellular resolution. | Banerji, Rohin; Grifno, Gabrielle N; Shi, Linzheng; Smolen, Dylan; LeBourdais, Rob; Muhvich, Johnathan; Eberman, Cate; Hiller, Bradley E; Lee, Jisu; Regan, Kathryn; Zheng, Siyi; Zhang, Sue; Jiang, John; Raslan, Ahmed A; Breda, Julia C; Pihl, Riley; Traber, Katrina; Mazzilli, Sarah; Ligresti, Giovanni; Mizgerd, Joseph P; Suki, Béla; Nia, Hadi T | Nature methods | 37710017 | 2023 Nov |
| Progressive Excitability Changes in the Medial Entorhinal Cortex in the 3xTg Mouse Model of Alzheimer's Disease Pathology. | Chen, Lingxuan; Christenson Wick, Zoé; Vetere, Lauren M; Vaughan, Nick; Jurkowski, Albert; Galas, Angelina; Diego, Keziah S; Philipsberg, Paul A; Soler, Ivan; Feng, Yu; Cai, Denise J; Shuman, Tristan | The Journal of neuroscience : the official journal of the Society for Neuroscience | 37714705 | 2023 Nov 01 |
| A Smart Intracellular Self-Assembling Bioorthogonal Raman Active Nanoprobe for Targeted Tumor Imaging. | Tanwar, Swati; Ghaemi, Behnaz; Raj, Piyush; Singh, Aruna; Wu, Lintong; Yuan, Yue; Arifin, Dian R; McMahon, Michael T; Bulte, Jeff W M; Barman, Ishan | Advanced science (Weinheim, Baden-Wurttemberg, Germany) | 37715297 | 2023 Dec |
| Conformational inhibitors of protein aggregation. | Fernández Ramírez, María Del Carmen; Afrin, Shumaila; Saelices, Lorena | Current opinion in structural biology | 37717490 | 2023 Dec |
| Steroid hormone signaling: What we can learn from insect models. | Okamoto, Naoki; Fujinaga, Daiki; Yamanaka, Naoki | Vitamins and hormones | 37717997 | 2023 |
| Modeling Gut Neuro-Epithelial Connections in a Novel Micro uidic Device. | De Hoyos, Manolo; Yu, Xi; Gonzalez-Suarez, Alan; Mercado-Perez, Arnaldo; Krueger, Eugene; Hernandez, Jeric; Druliner, Brooke; Linden, David R; Beyder, Arthur; Chen, Sisi; Fedyshyn, Yaroslav; Revzin, Alexander | Research square | 37720014 | 2023 Sep 07 |
| Clinician Testing and Treatment Thresholds for Management of Urinary Tract Infection. | Harris, Andrea; Pineles, Lisa; Baghdadiv, Jonathan D; Magder, Larry; Dhaliwal, Gurpreet; Korenstein, Deborah; Harris, Anthony D; Morgan, Daniel J | Open forum infectious diseases | 37720701 | 2023 Sep |
| Multiplexed Assessment of Promiscuous Non-Canonical Amino Acid Synthase Activity in a Pyridoxal Phosphate-Dependent Protein Family. | Zmich, Anna; Perkins, Lydia J; Bingman, Craig; Acheson, Justin F; Buller, Andrew R | ACS catalysis | 37720819 | 2023 Sep 01 |
| Manipulating the Destiny of Wild Populations Using CRISPR. | Raban, Robyn; Marshall, John M; Hay, Bruce A; Akbari, Omar S | Annual review of genetics | 37722684 | 2023 Nov 27 |
| Whole-genome screens reveal regulators of differentiation state and context-dependent migration in human neutrophils. | Belliveau, Nathan M; Footer, Matthew J; Akdoǧan, Emel; van Loon, Aaron P; Collins, Sean R; Theriot, Julie A | Nature communications | 37723145 | 2023 Sep 18 |
| Acetate acts as a metabolic immunomodulator by bolstering T-cell effector function and potentiating antitumor immunity in breast cancer. | Miller, Katelyn D; O'Connor, Seamus; Pniewski, Katherine A; Kannan, Toshitha; Acosta, Reyes; Mirji, Gauri; Papp, Sara; Hulse, Michael; Mukha, Dzmitry; Hlavaty, Sabina I; Salcido, Kelsey N; Bertolazzi, Fabrizio; Srikanth, Yellamelli V V; Zhao, Steven; Wellen, Kathryn E; Shinde, Rahul S; Claiborne, Daniel T; Kossenkov, Andrew; Salvino, Joseph M; Schug, Zachary T | Nature cancer | 37723305 | 2023 Oct |
| PD-1 instructs a tumor-suppressive metabolic program that restricts glycolysis and restrains AP-1 activity in T cell lymphoma. | Wartewig, Tim; Daniels, Jay; Schulz, Miriam; Hameister, Erik; Joshi, Abhinav; Park, Joonhee; Morrish, Emma; Venkatasubramani, Anuroop V; Cernilogar, Filippo M; van Heijster, Frits H A; Hundshammer, Christian; Schneider, Heike; Konstantinidis, Filippos; Gabler, Judith V; Klement, Christine; Kurniawan, Henry; Law, Calvin; Lee, Yujin; Choi, Sara; Guitart, Joan; Forne, Ignasi; Giustinani, Jérôme; Müschen, Markus; Jain, Salvia; Weinstock, David M; Rad, Roland; Ortonne, Nicolas; Schilling, Franz; Schotta, Gunnar; Imhof, Axel; Brenner, Dirk; Choi, Jaehyuk; Ruland, Jürgen | Nature cancer | 37723306 | 2023 Oct |
| Wireless agents for brain recording and stimulation modalities. | Bok, Ilhan; Vareberg, Adam; Gokhale, Yash; Bhatt, Suyash; Masterson, Emily; Phillips, Jack; Zhu, Tianxiang; Ren, Xiaoxuan; Hai, Aviad | Bioelectronic medicine | 37726851 | 2023 Sep 20 |
| Increased task-relevant fMRI responsiveness in comatose cardiac arrest patients is associated with improved neurologic outcomes. | Dhakal, Kiran; Rosenthal, Eric S; Kulpanowski, Annelise M; Dodelson, Jacob A; Wang, Zihao; Cudemus-Deseda, Gaston; Villien, Marjorie; Edlow, Brian L; Presciutti, Alexander M; Januzzi, James L; Ning, MingMing; Taylor Kimberly, W; Amorim, Edilberto; Brandon | Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism | 37728641 | 2024 Jan |
| Acetyl-methyllysine marks chromatin at active transcription start sites. | Lu-Culligan, William J; Connor, Leah J; Xie, Yixuan; Ekundayo, Babatunde E; Rose, Brendan T; Machyna, Martin; Pintado-Urbanc, Andreas P; Zimmer, Joshua T; Vock, Isaac W; Bhanu, Natarajan V; King, Megan C; Garcia, Benjamin A; Bleichert, Franziska; Simon, Matthew D | Nature | 37731000 | 2023 Oct |
| Accurate single-molecule spot detection for image-based spatial transcriptomics with weakly supervised deep learning. | Laubscher, Emily; Wang, Xuefei Julie; Razin, Nitzan; Dougherty, Tom; Xu, Rosalind J; Ombelets, Lincoln; Pao, Edward; Graf, William; Moffitt, Jeffrey R; Yue, Yisong; Valen, David Van | bioRxiv : the preprint server for biology | 37732188 | 2023 Sep 08 |
| Pathogenic mitochondrial DNA mutations inhibit melanoma metastasis. | Shelton, Spencer D; House, Sara; Ramesh, Vijayashree; Chen, Zhenkang; Wei, Tao; Wang, Xun; Llamas, Claire B; Venigalla, Siva Sai Krishna; Menezes, Cameron J; Zhao, Zhiyu; Gill, Jennifer G; DeBerardinis, Ralph J; Morrison, Sean J; Tasdogan, Alpaslan; Mishra, Prashant | bioRxiv : the preprint server for biology | 37732192 | 2023 Sep 05 |
| MatchMaps: Non-isomorphous difference maps for X-ray crystallography. | Brookner, Dennis E; Hekstra, Doeke R | bioRxiv : the preprint server for biology | 37732267 | 2023 Sep 04 |
| Inhibitory feedback from the motor circuit gates mechanosensory processing in Caenorhabditis elegans. | Kumar, Sandeep; Sharma, Anuj K; Tran, Andrew; Liu, Mochi; Leifer, Andrew M | PLoS biology | 37733772 | 2023 Sep |
| Toward Personalized Treatment of Depression: An Affordable Citalopram Test based on a Solid-Contact Potentiometric Electrode for at-Home Monitoring of the Antidepressant Dosage. | Chen, Ruitong; Amirghasemi, Farbod; Ma, Haozheng; Ong, Victor; Tran, Ava; Mousavi, Maral P S | ACS sensors | 37734027 | 2023 Oct 27 |
| A microwell platform for high-throughput longitudinal phenotyping and selective retrieval of organoids. | Sockell, Alexandra; Wong, Wing; Longwell, Scott; Vu, Thy; Karlsson, Kasper; Mokhtari, Daniel; Schaepe, Julia; Lo, Yuan-Hung; Cornelius, Vincent; Kuo, Calvin; Van Valen, David; Curtis, Christina; Fordyce, Polly M | Cell systems | 37734323 | 2023 Sep 20 |
| ActuAtor, a Listeria-inspired molecular tool for physical manipulation of intracellular organizations through de novo actin polymerization. | Nakamura, Hideki; Rho, Elmer; Lee, Christopher T; Itoh, Kie; Deng, Daqi; Watanabe, Satoshi; Razavi, Shiva; Matsubayashi, Hideaki T; Zhu, Cuncheng; Jung, Eleanor; Rangamani, Padmini; Watanabe, Shigeki; Inoue, Takanari | Cell reports | 37734382 | 2023 Oct 31 |
| Lola-I is a promoter pioneer factor that establishes de novo Pol II pausing during development. | Ramalingam, Vivekanandan; Yu, Xinyang; Slaughter, Brian D; Unruh, Jay R; Brennan, Kaelan J; Onyshchenko, Anastasiia; Lange, Jeffrey J; Natarajan, Malini; Buck, Michael; Zeitlinger, Julia | Nature communications | 37735176 | 2023 Sep 21 |
| Distinct sub-second dopamine signaling in dorsolateral striatum measured by a genetically-encoded fluorescent sensor. | Salinas, Armando G; Lee, Jeong Oen; Augustin, Shana M; Zhang, Shiliang; Patriarchi, Tommaso; Tian, Lin; Morales, Marisela; Mateo, Yolanda; Lovinger, David M | Nature communications | 37739964 | 2023 Sep 22 |
| Expressive dynamics models with nonlinear injective readouts enable reliable recovery of latent features from neural activity. | Versteeg, Christopher; Sedler, Andrew R; McCart, Jonathan D; Pandarinath, Chethan | ArXiv | 37744459 | 2023 Sep 12 |
| Joint cortical registration of geometry and function using semi-supervised learning. | Li, Jian; Tuckute, Greta; Fedorenko, Evelina; Edlow, Brian L; Fischl, Bruce; Dalca, Adrian V | ArXiv | 37744470 | 2023 Oct 16 |
| An explainable language model for antibody specificity prediction using curated influenza hemagglutinin antibodies. | Wang, Yiquan; Lv, Huibin; Lei, Ruipeng; Yeung, Yuen-Hei; Shen, Ivana R; Choi, Danbi; Teo, Qi Wen; Tan, Timothy J C; Gopal, Akshita B; Chen, Xin; Graham, Claire S; Wu, Nicholas C | bioRxiv : the preprint server for biology | 37745338 | 2023 Sep 14 |
| Cas13d-mediated isoform-specific RNA knockdown with a unified computational and experimental toolbox. | Schertzer, Megan D; Stirn, Andrew; Isaev, Keren; Pereira, Laura; Das, Anjali; Harbison, Claire; Park, Stella H; Wessels, Hans-Hermann; Sanjana, Neville E; Knowles, David A | bioRxiv : the preprint server for biology | 37745416 | 2023 Sep 13 |
| Reversions mask the contribution of adaptive evolution in microbiomes. | Torrillo, Paul A; Lieberman, Tami D | bioRxiv : the preprint server for biology | 37745437 | 2023 Sep 17 |
| Reentrant DNA shells tune polyphosphate condensate size. | Chawla, Ravi; Tom, Jenna K A; Boyd, Tumara; Grotjahn, Danielle A; Park, Donghyun; Deniz, Ashok A; Racki, Lisa R | bioRxiv : the preprint server for biology | 37745474 | 2023 Sep 15 |
| Click editing enables programmable genome writing using DNA polymerases and HUH endonucleases. | da Silva, Joana Ferreira; Tou, Connor J; King, Emily M; Eller, Madeline L; Ma, Linyuan; Rufino-Ramos, David; Kleinstiver, Benjamin P | bioRxiv : the preprint server for biology | 37745481 | 2023 Sep 13 |
| Piezo1-mediated spontaneous calcium transients in satellite glia impact dorsal root ganglia development. | Brandt, Jacob P; Smith, Cody J | PLoS biology | 37747915 | 2023 Sep |
| Dissecting key regulators of transcriptome kinetics through scalable single-cell RNA profiling of pooled CRISPR screens. | Xu, Zihan; Sziraki, Andras; Lee, Jasper; Zhou, Wei; Cao, Junyue | Nature biotechnology | 37749268 | 2023 Sep 25 |
| Negative and ambisense RNA virus ribonucleocapsids: more than protective armor. | Sabsay, Kimberly R; Te Velthuis, Aartjan J W | Microbiology and molecular biology reviews : MMBR | 37750733 | 2023 Dec 20 |
| Large-scale capture of hidden fluorescent labels for training generalizable markerless motion capture models. | Butler, Daniel J; Keim, Alexander P; Ray, Shantanu; Azim, Eiman | Nature communications | 37752123 | 2023 Sep 26 |
| Quantitative Detection of Thyroid-Stimulating Hormone in Patient Samples with a Nanomechanical Single-Antibody Spectro-Immunoassay. | Zheng, Peng; Raj, Piyush; Wu, Lintong; Mizutani, Takayuki; Szabo, Miklos; Hanson, William A; Barman, Ishan | Small (Weinheim an der Bergstrasse, Germany) | 37752776 | 2023 Sep 26 |
| Spatial atlas of the mouse central nervous system at molecular resolution. | Shi, Hailing; He, Yichun; Zhou, Yiming; Huang, Jiahao; Maher, Kamal; Wang, Brandon; Tang, Zefang; Luo, Shuchen; Tan, Peng; Wu, Morgan; Lin, Zuwan; Ren, Jingyi; Thapa, Yaman; Tang, Xin; Chan, Ken Y; Deverman, Benjamin E; Shen, Hao; Liu, Albert; Liu, Jia; Wang, Xiao | Nature | 37758947 | 2023 Oct |
| Navigating the kidney organoid: insights into assessment and enhancement of nephron function. | Tabibzadeh, Nahid; Satlin, Lisa M; Jain, Sanjay; Morizane, Ryuji | American journal of physiology. Renal physiology | 37767571 | 2023 Dec 01 |
| An exhaustive multiple knockout approach to understanding cell wall hydrolase function in Bacillus subtilis. | Wilson, Sean A; Tank, Raveen K J; Hobbs, Jamie K; Foster, Simon J; Garner, Ethan C | mBio | 37768080 | 2023 Oct 31 |
| People Wear Masks when they Ski: Comparing Congruent and Incongruent Behavioral Context Appeals. | Liao, Yi; Adams, Dallin R; Lillie, Helen M; Jensen, Jakob D | Journal of health communication | 37768095 | 2023 Nov 02 |
| Evolutionary Engineering a Larger Porin Using a Loop-to-Hairpin Mechanism. | Dhar, Rik; Bowman, Alexander M; Hatungimana, Brunojoel; Sg Slusky, Joanna | Journal of molecular biology | 37769963 | 2023 Nov 15 |
| On the path to predicting immune responses in the lung: Modeling the pulmonary innate immune system at the air-liquid interface (ALI). | Graf, Jodi; Trautmann-Rodriguez, Michael; Sabnis, Simone; Kloxin, April M; Fromen, Catherine A | European journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences | 37770004 | 2023 Dec 01 |
| Tracking cell-type-specific temporal dynamics in human and mouse brains. | Lu, Ziyu; Zhang, Melissa; Lee, Jasper; Sziraki, Andras; Anderson, Sonya; Zhang, Zehao; Xu, Zihan; Jiang, Weirong; Ge, Shaoyu; Nelson, Peter T; Zhou, Wei; Cao, Junyue | Cell | 37774676 | 2023 Sep 28 |
| Formulation of Chitosan-Zein Nano-in-Microparticles for Oral DNA Delivery. | Heck, Kari; Farris, Eric; Pannier, Angela K | Methods in molecular biology (Clifton, N.J.) | 37775665 | 2024 |
| Widespread impact of immunoglobulin V-gene allelic polymorphisms on antibody reactivity. | Yuan, Meng; Feng, Ziqi; Lv, Huibin; So, Natalie; Shen, Ivana R; Tan, Timothy J C; Teo, Qi Wen; Ouyang, Wenhao O; Talmage, Logan; Wilson, Ian A; Wu, Nicholas C | Cell reports | 37777966 | 2023 Oct 31 |
| Discovering chromatin dysregulation induced by protein-coding perturbations at scale. | Frenkel, Max; Hujoel, Margaux L A; Morris, Zachary; Raman, Srivatsan | bioRxiv : the preprint server for biology | 37781603 | 2023 Sep 21 |
| Multidimensional Super-Resolution Microscopy Unveils Nanoscale Surface Aggregates in the Aging of FUS Condensates. | He, Changdong; Wu, Chun Ying; Li, Wan; Xu, Ke | Journal of the American Chemical Society | 37782826 | 2023 Nov 08 |
| AgRP neuron activity promotes associations between sensory and nutritive signals to guide flavor preference. | Nyema, Nathaniel T; McKnight, Aaron D; Vargas-Elvira, Alexandra G; Schneps, Heather M; Gold, Elizabeth G; Myers, Kevin P; Alhadeff, Amber L | bioRxiv : the preprint server for biology | 37786670 | 2023 Sep 22 |
| Energetic Demands Regulate Sleep-Wake Rhythm Circuit Development. | Poe, Amy R; Zhu, Lucy; Tang, Si Hao; Valencia, Ella; Kayser, Matthew S | bioRxiv : the preprint server for biology | 37786713 | 2023 Sep 22 |
| Signaling dynamics distinguish high- and low-priority neutrophil chemoattractant receptors. | Lundgren, Stefan M; Rocha-Gregg, Briana L; Akdoğan, Emel; Mysore, Maya N; Hayes, Samantha; Collins, Sean R | Science signaling | 37788324 | 2023 Oct 03 |
| Construction and reconfiguration of dynamic DNA origami assemblies with coiled-coil patches and patterns. | Teng, T; Bernal-Chanchavac, J; Stephanopoulos, N; Castro, C E | bioRxiv : the preprint server for biology | 37790447 | 2023 Sep 24 |
| Pooled endogenous protein tagging and recruitment for scalable discovery of effectors for induced proximity therapeutics. | Serebrenik, Yevgeniy V; Mani, Deepak; Maujean, Timothé; Burslem, George M; Shalem, Ophir | Research square | 37790450 | 2023 Sep 13 |
| Immune Responses in Checkpoint Myocarditis Across Heart, Blood, and Tumor. | Blum, Steven M; Zlotoff, Daniel A; Smith, Neal P; Kernin, Isabela J; Ramesh, Swetha; Zubiri, Leyre; Caplin, Joshua; Samanta, Nandini; Martin, Sidney C; Tirard, Alice; Sen, Pritha; Song, Yuhui; Barth, Jaimie; Slowikowski, Kamil; Nasrallah, Mazen; Tantivit, Jessica; Manakongtreecheep, Kasidet; Arnold, Benjamin Y; McGuire, John; Pinto, Christopher J; McLoughlin, Daniel; Jackson, Monica; Chan, PuiYee; Lawless, Aleigha; Sharova, Tatyana; Nieman, Linda T; Gainor, Justin F; Juric, Dejan; Mino-Kenudsen, Mari; Sullivan, Ryan J; Boland, Genevieve M; Stone, James R; Thomas, Molly F; Neilan, Tomas G; Reynolds, Kerry L; Villani, Alexandra-Chloé | bioRxiv : the preprint server for biology | 37790460 | 2023 Nov 29 |
| Dynamin 1xA interacts with Endophilin A1 via its spliced long C-terminus for ultrafast endocytosis. | Imoto, Yuuta; Xue, Jing; Luo, Lin; Raychaudhuri, Sumana; Itoh, Kie; Ma, Ye; Craft, George E; Kwan, Ann H; Mackay, Joel P; Ha, Taekjip; Watanabe, Shigeki; Robinson, Phillip J | bioRxiv : the preprint server for biology | 37790502 | 2023 Sep 24 |
| Paralysis by analysis: Overcoming cardiac contraction with computer vision. | Christoph, Jan; Ripplinger, Crystal M | Proceedings of the National Academy of Sciences of the United States of America | 37792520 | 2023 Oct 17 |
| Microanalytical Mass Spectrometry with Super-Resolution Microscopy Reveals a Proteome Transition During Development of the Brain's Circadian Pacemaker. | Choi, Sam B; Vatan, Tarlan; Alexander, Theresa A; Zhang, Chenghang; Mitchell, Shyrice M; Speer, Colenso M; Nemes, Peter | Analytical chemistry | 37792996 | 2023 Oct 17 |
| PAM-flexible genome editing with an engineered chimeric Cas9. | Zhao, Lin; Koseki, Sabrina R T; Silverstein, Rachel A; Amrani, Nadia; Peng, Christina; Kramme, Christian; Savic, Natasha; Pacesa, Martin; Rodríguez, Tomás C; Stan, Teodora; Tysinger, Emma; Hong, Lauren; Yudistyra, Vivian; Ponnapati, Manvitha R; Jacobson, Joseph M; Church, George M; Jakimo, Noah; Truant, Ray; Jinek, Martin; Kleinstiver, Benjamin P; Sontheimer, Erik J; Chatterjee, Pranam | Nature communications | 37794046 | 2023 Oct 04 |
| Protective effect of pre-existing natural immunity in a nonhuman primate reinfection model of congenital cytomegalovirus infection. | Moström, Matilda J; Yu, Shan; Tran, Dollnovan; Saccoccio, Frances M; Versoza, Cyril J; Malouli, Daniel; Mirza, Anne; Valencia, Sarah; Gilbert, Margaret; Blair, Robert V; Hansen, Scott; Barry, Peter; Früh, Klaus; Jensen, Jeffrey D; Pfeifer, Susanne P; Kowalik, Timothy F; Permar, Sallie R; Kaur, Amitinder | PLoS pathogens | 37796819 | 2023 Oct |
| Complement factor D targeting protects endotheliopathy in organoid and monkey models of COVID-19. | Kawakami, Eri; Saiki, Norikazu; Yoneyama, Yosuke; Moriya, Chiharu; Maezawa, Mari; Kawamura, Shuntaro; Kinebuchi, Akiko; Kono, Tamaki; Funata, Masaaki; Sakoda, Ayaka; Kondo, Shigeru; Ebihara, Takeshi; Matsumoto, Hisatake; Togami, Yuki; Ogura, Hiroshi; Sugihara, Fuminori; Okuzaki, Daisuke; Kojima, Takashi; Deguchi, Sayaka; Vallee, Sebastien; McQuade, Susan; Islam, Rizwana; Natarajan, Madhusudan; Ishigaki, Hirohito; Nakayama, Misako; Nguyen, Cong Thanh; Kitagawa, Yoshinori; Wu, Yunheng; Mori, Kensaku; Hishiki, Takayuki; Takasaki, Tomohiko; Itoh, Yasushi; Takayama, Kazuo; Nio, Yasunori; Takebe, Takanori | Cell stem cell | 37802037 | 2023 Oct 05 |
| Heterozygous deletion of the autism-associated gene CHD8 impairs synaptic function through widespread changes in gene expression and chromatin compaction. | Shi, Xi; Lu, Congyi; Corman, Alba; Nikish, Alexandra; Zhou, Yang; Platt, Randy J; Iossifov, Ivan; Zhang, Feng; Pan, Jen Q; Sanjana, Neville E | American journal of human genetics | 37802044 | 2023 Oct 05 |
| Upregulation of exosome secretion from tumor-associated macrophages plays a key role in the suppression of anti-tumor immunity. | Zhong, Wenqun; Lu, Youtao; Han, Xuexiang; Yang, Jingbo; Qin, Zhiyuan; Zhang, Wei; Yu, Ziyan; Wu, Bin; Liu, Shujing; Xu, Wei; Zheng, Cathy; Schuchter, Lynn M; Karakousis, Giorgos C; Mitchell, Tara C; Amaravadi, Ravi; Flowers, Ahron J; Gimotty, Phyllis A; Xiao, Min; Mills, Gordon; Herlyn, Meenhard; Dong, Haidong; Mitchell, Michael J; Kim, Junhyong; Xu, Xiaowei; Guo, Wei | Cell reports | 37805922 | 2023 Oct 31 |
| AMPK Regulates Phagophore-to-Autophagosome Maturation. | Barnaba, Carlo; Broadbent, David G; Perez, Gloria I; Schmidt, Jens C | bioRxiv : the preprint server for biology | 37808644 | 2023 Sep 30 |
| Exploring the role of the private sector in tuberculosis detection and management in Lima, Peru: a mixed-methods patient pathway analysis. | Wippel, Christoph; Farroñay, Sheyla; Gilbert, Hannah N; Millones, Ana Karina; Acosta, Diana; Torres, Isabel; Jimenez, Judith; Lecca, Leonid; Yuen, Courtney M | medRxiv : the preprint server for health sciences | 37808756 | 2023 Sep 29 |
| Bacterial antiviral defense pathways encode eukaryotic-like ubiquitination systems. | Chambers, Lydia R; Ye, Qiaozhen; Cai, Jiaxi; Gong, Minheng; Ledvina, Hannah E; Zhou, Huilin; Whiteley, Aaron T; Suhandynata, Raymond T; Corbett, Kevin D | bioRxiv : the preprint server for biology | 37808811 | 2023 Sep 26 |
| Engineered Extracellular Vesicle-Based Therapies for Valvular Heart Disease. | Salazar-Puerta, Ana I; Kordowski, Mia; Cuellar-Gaviria, Tatiana Z; Rincon-Benavides, Maria A; Hussein, Jad; Flemister, Dorma; Mayoral-Andrade, Gabriel; Barringer, Grant; Guilfoyle, Elizabeth; Blackstone, Britani N; Deng, Binbin; Zepeda-Orozco, Diana; McComb, David W; Powell, Heather; Dasi, Lakshmi P; Gallego-Perez, Daniel; Higuita-Castro, Natalia | Cellular and molecular bioengineering | 37810997 | 2023 Aug |
| siRNA Lipid-Polymer Nanoparticles Targeting E-Selectin and Cyclophilin A in Bone Marrow for Combination Multiple Myeloma Therapy. | Figueroa-Espada, Christian G; Guimarães, Pedro P G; Riley, Rachel S; Xue, Lulu; Wang, Karin; Mitchell, Michael J | Cellular and molecular bioengineering | 37810998 | 2023 Aug |
| Membrane-proximal motifs encode differences in signaling strength between type I and III interferon receptors. | Mesev, Emily V; Lin, Aaron E; Guare, Emma G; Heller, Brigitte L; Douam, Florian; Adamson, Britt; Toettcher, Jared E; Ploss, Alexander | Science signaling | 37816090 | 2023 Oct 10 |
| Theoretical analysis reveals a role for RAF conformational autoinhibition in paradoxical activation. | Mendiratta, Gaurav; Stites, Edward | eLife | 37823369 | 2023 Oct 12 |
| Concurrent Targeting of HDAC and PI3K to Overcome Phenotypic Heterogeneity of Castration-resistant and Neuroendocrine Prostate Cancers. | Zhang, Ailin; Lau, Nathan A; Wong, Alicia; Brown, Lisha G; Coleman, Ilsa M; De Sarkar, Navonil; Li, Dapei; DeLucia, Diana C; Labrecque, Mark P; Nguyen, Holly M; Conner, Jennifer L; Dumpit, Ruth F; True, Lawrence D; Lin, Daniel W; Corey, Eva; Alumkal, Joshi J; Nelson, Peter S; Morrissey, Colm; Lee, John K | Cancer research communications | 37823778 | 2023 Nov 20 |
| A chemically-defined growth medium to support Lactobacillus-Acetobacter sp. community analysis. | Aumiller, Kevin; Scheffler, Robert; Stevens, Eric T; Güvener, Zehra T; Tung, Emily; Grimaldo, Anna B; Carlson, Hans K; Deutschbauer, Adam M; Taga, Michiko E; Marco, Maria L; Ludington, William B | PloS one | 37824485 | 2023 |
| The Role of Endothelial Cells in Atherosclerosis: Insights from Genetic Association Studies. | Pepin, Mark E; Gupta, Rajat | The American journal of pathology | 37827214 | 2023 Oct 10 |
| Cytoplasmic division cycles without the nucleus and mitotic CDK/cyclin complexes. | Bakshi, Anand; Iturra, Fabio Echegaray; Alamban, Andrew; Rosas-Salvans, Miquel; Dumont, Sophie; Aydogan, Mustafa G | Cell | 37832525 | 2023 Oct 12 |
| Synthetic augmentation of bilirubin metabolism in human pluripotent stem cell-derived liver organoids. | Reza, Hasan Al; Farooqui, Zishaan; Reza, Abid Al; Conroy, Callen; Iwasawa, Kentaro; Ogura, Yasuhiro; Okita, Keisuke; Osafune, Kenji; Takebe, Takanori | Stem cell reports | 37832542 | 2023 Nov 14 |
| Hyperspectral Raman Imaging for Automated Recognition of Human Renal Amyloid. | Kim, Jeong Hee; Zhang, Chi; Sperati, C John; Barman, Ishan; Bagnasco, Serena M | The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society | 37833851 | 2023 Nov |
| The mixing method used to formulate lipid nanoparticles affects mRNA delivery efficacy and organ tropism. | Strelkova Petersen, Daria M; Chaudhary, Namit; Arral, Mariah L; Weiss, Ryan M; Whitehead, Kathryn A | European journal of pharmaceutics and biopharmaceutics : official journal of Arbeitsgemeinschaft fur Pharmazeutische Verfahrenstechnik e.V | 37838143 | 2023 Nov |
| Mechanisms of Regeneration and Fibrosis in the Endometrium. | Ang, Claire J; Skokan, Taylor D; McKinley, Kara L | Annual review of cell and developmental biology | 37843929 | 2023 Oct 16 |
| Integration of an LPAR1 Antagonist into Liposomes Enhances Their Internalization and Tumor Accumulation in an Animal Model of Human Metastatic Breast Cancer. | Abdelmessih, Rudolf G; Xu, Jiaming; Hung, Francisco R; Auguste, Debra T | Molecular pharmaceutics | 37844135 | 2023 Nov 06 |
| β-Adrenergic Signaling Promotes Morphological Maturation of Astrocytes in Female Mice. | Rosenberg, Marci F; Godoy, Marlesa I; Wade, Sarah D; Paredes, Mercedes F; Zhang, Ye; Molofsky, Anna V | The Journal of neuroscience : the official journal of the Society for Neuroscience | 37845031 | 2023 Dec 13 |
| Single-nucleotide variants within heart enhancers increase binding affinity and disrupt heart development. | Jindal, Granton A; Bantle, Alexis T; Solvason, Joe J; Grudzien, Jessica L; D'Antonio-Chronowska, Agnieszka; Lim, Fabian; Le, Sophia H; Song, Benjamin P; Ragsac, Michelle F; Klie, Adam; Larsen, Reid O; Frazer, Kelly A; Farley, Emma K | Developmental cell | 37848026 | 2023 Nov 06 |
| Serotonin reduction in post-acute sequelae of viral infection. | Wong, Andrea C; Devason, Ashwarya S; Umana, Iboro C; Cox, Timothy O; Dohnalová, Lenka; Litichevskiy, Lev; Perla, Jonathan; Lundgren, Patrick; Etwebi, Zienab; Izzo, Luke T; Kim, Jihee; Tetlak, Monika; Descamps, Hélène C; Park, Simone L; Wisser, Stephen; McKnight, Aaron D; Pardy, Ryan D; Kim, Junwon; Blank, Niklas; Patel, Shaan; Thum, Katharina; Mason, Sydney; Beltra, Jean-Christophe; Michieletto, Michaël F; Ngiow, Shin Foong; Miller, Brittany M; Liou, Megan J; Madhu, Bhoomi; Dmitrieva-Posocco, Oxana; Huber, Alex S; Hewins, Peter; Petucci, Christopher; Chu, Candice P; Baraniecki-Zwil, Gwen; Giron, Leila B; Baxter, Amy E; Greenplate, Allison R; Kearns, Charlotte; Montone, Kathleen; Litzky, Leslie A; Feldman, Michael; Henao-Mejia, Jorge; Striepen, Boris; Ramage, Holly; Jurado, Kellie A; Wellen, Kathryn E; O'Doherty, Una; Abdel-Mohsen, Mohamed; Landay, Alan L; Keshavarzian, Ali; Henrich, Timothy J; Deeks, Steven G; Peluso, Michael J; Meyer, Nuala J; Wherry, E John; Abramoff, Benjamin A; Cherry, Sara; Thaiss, Christoph A; Levy, Maayan | Cell | 37848036 | 2023 Oct 26 |
| High-Affinity Host-Guest Recognition for Efficient Assembly and Enzymatic Responsiveness of DNA Nanostructures. | Narayanan, Raghu Pradeep; Prasad, Abhay; Buchberger, Alex; Zou, Lei; Bernal-Chanchavac, Julio; MacCulloch, Tara; Fahmi, Nour Eddine; Yan, Hao; Zhang, Fei; Webber, Matthew J; Stephanopoulos, Nicholas | Small (Weinheim an der Bergstrasse, Germany) | 37849034 | 2023 Oct 17 |
| Conserved enhancers control notochord expression of vertebrate Brachyury. | Kemmler, Cassie L; Smolikova, Jana; Moran, Hannah R; Mannion, Brandon J; Knapp, Dunja; Lim, Fabian; Czarkwiani, Anna; Hermosilla Aguayo, Viviana; Rapp, Vincent; Fitch, Olivia E; Bötschi, Seraina; Selleri, Licia; Farley, Emma; Braasch, Ingo; Yun, Maximina; | Nature communications | 37852970 | 2023 Oct 18 |
| A Legionella toxin exhibits tRNA mimicry and glycosyl transferase activity to target the translation machinery and trigger a ribotoxic stress response. | Subramanian, Advait; Wang, Lan; Moss, Tom; Voorhies, Mark; Sangwan, Smriti; Stevenson, Erica; Pulido, Ernst H; Kwok, Samentha; Chalkley, Robert J; Li, Kathy H; Krogan, Nevan J; Swaney, Danielle L; Burlingame, Alma L; Floor, Stephen N; Sil, Anita; Walter, | Nature cell biology | 37857833 | 2023 Nov |
| RNA molecular recording with an engineered RNA deaminase. | Lin, Yizhu; Kwok, Samentha; Hein, Abigail E; Thai, Bao Quoc; Alabi, Yewande; Ostrowski, Megan S; Wu, Ke; Floor, Stephen N | Nature methods | 37857907 | 2023 Dec |
| Single-cell analysis and spatial resolution of the gut microbiome. | Madhu, Bhoomi; Miller, Brittany M; Levy, Maayan | Frontiers in cellular and infection microbiology | 37860069 | 2023 |
| Serotonin neurons in mating female mice are activated by male ejaculation. | Troconis, Eileen L; Seo, Changwoo; Guru, Akash; Warden, Melissa R | Current biology : CB | 37865094 | 2023 Nov 20 |
| Systematic investigation of allelic regulatory activity of schizophrenia-associated common variants. | McAfee, Jessica C; Lee, Sool; Lee, Jiseok; Bell, Jessica L; Krupa, Oleh; Davis, Jessica; Insigne, Kimberly; Bond, Marielle L; Zhao, Nanxiang; Boyle, Alan P; Phanstiel, Douglas H; Love, Michael I; Stein, Jason L; Ruzicka, W Brad; Davila-Velderrain, Jose; K | Cell genomics | 37868037 | 2023 Oct 11 |
| Accessible and Generalizable in Vitro Luminescence Assay for Detecting GPCR Activation. | Miller, Ruby M; Sescil, Jennifer; Sarcinella, Marina C; Bailey, Ryan C; Wang, Wenjing | ACS measurement science au | 37868356 | 2023 Oct 18 |
| Relationship of maternal cytomegalovirus-specific antibody responses and viral load to vertical transmission risk following primary maternal infection in a rhesus macaque model. | Otero, Claire E; Barfield, Richard; Scheef, Elizabeth; Nelson, Cody S; Rodgers, Nicole; Wang, Hsuan-Yuan; Moström, Matilda J; Manuel, Tabitha D; Sass, Julian; Schmidt, Kimberli; Taher, Husam; Papen, Courtney; Sprehe, Lesli; Kendall, Savannah; Davalos, Ang | PLoS pathogens | 37871009 | 2023 Oct |
| Gradient Descent Provably Solves Nonlinear Tomographic Reconstruction. | Fridovich-Keil, Sara; Valdivia, Fabrizio; Wetzstein, Gordon; Recht, Benjamin; Soltanolkotabi, Mahdi | ArXiv | 37873016 | 2023 Oct 06 |
| An Activity-Based Nanosensor for Minimally-Invasive Measurement of Protease Activity in Traumatic Brain Injury. | Kudryashev, Julia A; Madias, Marianne I; Kandell, Rebecca M; Lin, Queenie X; Kwon, Ester J | Advanced functional materials | 37873031 | 2023 Jul 11 |
| Site-specific arrangement and structure determination of minor groove binding molecules in self-assembled three-dimensional DNA crystals. | Simmons, Chad R; Buchberger, Alex; Henry, Skylar J W; Novacek, Alexandra; Fahmi, Nour Eddine; MacCulloch, Tara; Stephanopoulos, Nicholas; Yan, Hao | bioRxiv : the preprint server for biology | 37873139 | 2023 Oct 11 |
| Commensal myeloid crosstalk in neonatal skin regulates long-term cutaneous type 17 inflammation. | Dhariwala, Miqdad O; DeRogatis, Andrea M; Okoro, Joy N; Weckel, Antonin; Tran, Victoria M; Habrylo, Irek; Ojewumi, Oluwasunmisola T; Tammen, Allison E; Leech, John M; Merana, Geil R; Carale, Ricardo O; Barrere-Cain, Rio; Hiam-Galvez, Kamir J; Spitzer, Matthew H; Scharschmidt, Tiffany C | bioRxiv : the preprint server for biology | 37873143 | 2023 Oct 02 |
| Neuronal "parts list" and wiring diagram for a visual system. | Matsliah, Arie; Yu, Szi-Chieh; Kruk, Krzysztof; Bland, Doug; Burke, Austin; Gager, Jay; Hebditch, James; Silverman, Ben; Willie, Kyle; Willie, Ryan; Sorek, Marissa; Sterling, Amy R; Kind, Emil; Garner, Dustin; Sancer, Gizem; Wernet, Mathias; Kim, Sung Soo; Murthy, Mala; Seung, H Sebastian; FlyWire Consortium | bioRxiv : the preprint server for biology | 37873160 | 2023 Dec 04 |
| DengueSeq: A pan-serotype whole genome amplicon sequencing protocol for dengue virus. | Vogels, Chantal B F; Hill, Verity; Breban, Mallery I; Chaguza, Chrispin; Paul, Lauren M; Sodeinde, Afeez; Taylor-Salmon, Emma; Ott, Isabel M; Petrone, Mary E; Dijk, Dennis; Jonges, Marcel; Welkers, Matthijs R A; Locksmith, Timothy; Dong, Yibo; Tarigopula, Namratha; Tekin, Omer; Schmedes, Sarah; Bunch, Sylvia; Cano, Natalia; Jaber, Rayah; Panzera, Charles; Stryker, Ian; Vergara, Julieta; Zimler, Rebecca; Kopp, Edgar; Heberlein, Lea; Morrison, Andrea M; Michael, Scott F; Grubaugh, Nathan D | medRxiv : the preprint server for health sciences | 37873191 | 2023 Oct 13 |
| Scaling cross-tissue single-cell annotation models. | Fischer, Felix; Fischer, David S; Biederstedt, Evan; Villani, Alexandra-Chloé; Theis, Fabian J | bioRxiv : the preprint server for biology | 37873298 | 2023 Oct 10 |
| Stem cell-specific ecdysone signaling regulates the development and function of a Drosophila sleep homeostat. | Wani, Adil R; Chowdhury, Budhaditya; Luong, Jenny; Chaya, Gonzalo Morales; Patel, Krishna; Isaacman-Beck, Jesse; Shafer, Orie; Kayser, Matthew S; Syed, Mubarak Hussain | bioRxiv : the preprint server for biology | 37873323 | 2023 Oct 02 |
| Reprogramming megakaryocytes to engineer platelets as delivery vehicles. | Javdan, Shwan B; Islam, Farhana; Deans, Tara L | bioRxiv : the preprint server for biology | 37873465 | 2023 Oct 14 |
| A Rapid Antibody Enhancement Platform in Saccharomyces cerevisiae Using an Improved, Diversifying CRISPR Base Editor. | Cazier, Andrew P; Irvin, Olivia M; Chávez, Lizmarie S; Dalvi, Saachi; Abraham, Hannah; Wickramanayake, Nevinka; Yellayi, Sreenivas; Blazeck, John | ACS synthetic biology | 37873982 | 2023 Nov 17 |
| A thalamic-hippocampal CA1 signal for contextual fear memory suppression, extinction, and discrimination. | Ratigan, Heather C; Krishnan, Seetha; Smith, Shai; Sheffield, Mark E J | Nature communications | 37875465 | 2023 Oct 24 |
| Deep mutational scanning reveals the functional constraints and evolutionary potential of the influenza A virus PB1 protein. | Li, Yuan; Arcos, Sarah; Sabsay, Kimberly R; Te Velthuis, Aartjan J W; Lauring, Adam S | Journal of virology | 37882522 | 2023 Nov 30 |
| Genome editing with retroelements. | Tang, Stephen; Sternberg, Samuel H | Science (New York, N.Y.) | 37883564 | 2023 Oct 27 |
| Single-cell long-read sequencing in human cerebral organoids uncovers cell-type-specific and autism-associated exons. | Yang, Yalan; Yang, Runwei; Kang, Bowei; Qian, Sheng; He, Xin; Zhang, Xiaochang | Cell reports | 37889749 | 2023 Nov 28 |
| Acetylcholine waves and dopamine release in the striatum. | Matityahu, Lior; Gilin, Naomi; Sarpong, Gideon A; Atamna, Yara; Tiroshi, Lior; Tritsch, Nicolas X; Wickens, Jeffery R; Goldberg, Joshua A | Nature communications | 37891198 | 2023 Oct 27 |
| Conductive electrospun polymer improves stem cell-derived cardiomyocyte function and maturation. | Gonzalez, Gisselle; Nelson, Aileena C; Holman, Alyssa R; Whitehead, Alexander J; LaMontagne, Erin; Lian, Rachel; Vatsyayan, Ritwik; Dayeh, Shadi A; Engler, Adam J | Biomaterials | 37898021 | 2023 Nov |
| Constructing within and between hospital physician social networks for modeling physician research participation. | Bobak, Carly A; Mohan, Deepika; Murphy, Megan A; Barnato, Amber E; O'Malley, A James | BMC medical research methodology | 37898745 | 2023 Oct 28 |
| A pan-tissue survey of mosaic chromosomal alterations in 948 individuals. | Gao, Teng; Kastriti, Maria Eleni; Ljungström, Viktor; Heinzel, Andreas; Tischler, Arthur S; Oberbauer, Rainer; Loh, Po-Ru; Adameyko, Igor; Park, Peter J; Kharchenko, Peter V | Nature genetics | 37904053 | 2023 Nov |
| A dual sgRNA library design to probe genetic modifiers using genome-wide CRISPRi screens. | Guna, Alina; Page, Katharine R; Replogle, Joseph M; Esantsi, Theodore K; Wang, Maxine L; Weissman, Jonathan S; Voorhees, Rebecca M | BMC genomics | 37904134 | 2023 Oct 30 |
| Deconstructing the Mapper algorithm to extract richer topological and temporal features from functional neuroimaging data. | Haşegan, Daniel; Geniesse, Caleb; Chowdhury, Samir; Saggar, Manish | bioRxiv : the preprint server for biology | 37904918 | 2023 Oct 19 |
| BTSP, not STDP, Drives Shifts in Hippocampal Representations During Familiarization. | Madar, A D; Dong, C; Sheffield, M E J | bioRxiv : the preprint server for biology | 37904999 | 2023 Oct 17 |
| Pan-cancer analysis reveals multifaceted roles of retrotransposon-fusion RNAs. | Lee, Boram; Park, Junseok; Voshall, Adam; Maury, Eduardo; Kang, Yeeok; Kim, Yoen Jeong; Lee, Jin-Young; Shim, Hye-Ran; Kim, Hyo-Ju; Lee, Jung-Woo; Jung, Min-Hyeok; Kim, Si-Cho; Chu, Hoang Bao Khanh; Kim, Da-Won; Kim, Minjeong; Choi, Eun-Ji; Hwang, Ok Kyung; Lee, Ho Won; Ha, Kyungsoo; Choi, Jung Kyoon; Kim, Yongjoon; Choi, Yoonjoo; Park, Woong-Yang; Lee, Eunjung Alice | bioRxiv : the preprint server for biology | 37905014 | 2023 Oct 19 |
| Neural activity ramps in frontal cortex signal extended motivation during learning. | Regalado, Josue M; Asensio, Ariadna Corredera; Haunold, Theresa; Toader, Andrew C; Li, Yan Ran; Neal, Lauren A; Rajasethupathy, Priya | bioRxiv : the preprint server for biology | 37905153 | 2023 Oct 17 |
| Infernape uncovers cell type-specific and spatially resolved alternative polyadenylation in the brain. | Kang, Bowei; Yang, Yalan; Hu, Kaining; Ruan, Xiangbin; Liu, Yi-Lin; Lee, Pinky; Lee, Jasper; Wang, Jingshu; Zhang, Xiaochang | Genome research | 37907328 | 2023 Oct |
| Versatility and stability optimization of flow-focusing droplet generators via quality metric-driven design automation. | McIntyre, David; Lashkaripour, Ali; Arguijo, Diana; Fordyce, Polly; Densmore, Douglas | Lab on a chip | 37909215 | 2023 Nov 21 |
| Anti-inflammatory effects of hunger are transmitted to the periphery via projection-specific AgRP circuits. | Klima, Michelle L; Kruger, Kayla A; Goldstein, Nitsan; Pulido, Santiago; Low, Aloysius Y T; Assenmacher, Charles-Antoine; Alhadeff, Amber L; Betley, J Nicholas | Cell reports | 37910501 | 2023 Nov 28 |
| Neural signal propagation atlas of Caenorhabditis elegans. | Randi, Francesco; Sharma, Anuj K; Dvali, Sophie; Leifer, Andrew M | Nature | 37914938 | 2023 Nov |
| India ink to 3D imaging: The legacy of Dr. Deepak "Dee" N. Pandya and his influence on generations of neuroanatomists. | Blatt, Gene J; Brandenburg, Cheryl; Poulopoulos, Alexandros | The Journal of comparative neurology | 37916788 | 2023 Dec |
| Phosphatase specificity principles uncovered by MRBLE:Dephos and global substrate identification. | Hein, Jamin B; Nguyen, Hieu T; Garvanska, Dimitriya H; Nasa, Isha; Kruse, Thomas; Feng, Yinnian; Lopez Mendez, Blanca; Davey, Norman; Kettenbach, Arminja N; Fordyce, Polly M; Nilsson, Jakob | Molecular systems biology | 37916966 | 2023 Dec 06 |
| Super-resolution microscopy: Insights into mitochondria-lysosome crosstalk in health and disease. | Leisten, Eric D; Woods, Abby C; Wong, Yvette C | The Journal of cell biology | 37917024 | 2023 Dec 04 |
| A neurodegeneration checkpoint mediated by REST protects against the onset of Alzheimer's disease. | Aron, Liviu; Qiu, Chenxi; Ngian, Zhen Kai; Liang, Marianna; Drake, Derek; Choi, Jaejoon; Fernandez, Marty A; Roche, Perle; Bunting, Emma L; Lacey, Ella K; Hamplova, Sara E; Yuan, Monlan; Wolfe, Michael S; Bennett, David A; Lee, Eunjung A; Yankner, Bruce A | Nature communications | 37919281 | 2023 Nov 02 |
| A high-throughput and low-waste viability assay for microbes. | Meyer, Christian T; Lynch, Grace K; Stamo, Dana F; Miller, Eugene J; Chatterjee, Anushree; Kralj, Joel M | Nature microbiology | 37919425 | 2023 Dec |
| Pyramidal hyperbolic metasurfaces enhance spontaneous emission of nitrogen-vacancy centers in nanodiamond. | Zheng, Peng; Liang, Le; Arora, Saransh; Ray, Krishanu; Semancik, Steve; Barman, Ishan | Advanced optical materials | 37920689 | 2023 Mar 17 |
| Generation of glucocorticoid-producing cells derived from human pluripotent stem cells. | Ruiz-Babot, Gerard; Eceiza, Ariane; Abollo-Jiménez, Fernando; Malyukov, Maria; Carlone, Diana L; Borges, Kleiton; Da Costa, Alexandra Rodrigues; Qarin, Shamma; Matsumoto, Takuya; Morizane, Ryuji; Skarnes, William C; Ludwig, Barbara; Chapple, Paul J; Guasti, Leonardo; Storr, Helen L; Bornstein, Stefan R; Breault, David T | Cell reports methods | 37924815 | 2023 Nov 20 |
| AgRP neuron activity promotes associations between sensory and nutritive signals to guide flavor preference. | Nyema, Nathaniel T; McKnight, Aaron D; Vargas-Elvira, Alexandra G; Schneps, Heather M; Gold, Elizabeth G; Myers, Kevin P; Alhadeff, Amber L | Molecular metabolism | 37925021 | 2023 Dec |
| Causal association of COVID-19 with brain structure changes: Findings from a non-overlapping 2-sample Mendelian randomization study. | Ding, Pingjian; Xu, Rong | Journal of the neurological sciences | 37925898 | 2023 Nov 15 |
| Three linked variants have opposing regulatory effects on isovaleryl-CoA dehydrogenase gene expression. | Brown, Elizabeth A; Kales, Susan; Boyle, Michael James; Vitti, Joseph; Kotliar, Dylan; Schaffner, Steve; Tewhey, Ryan; Sabeti, Pardis C | Human molecular genetics | 37930192 | 2023 Oct 31 |
| Investigating tumor-host response dynamics in preclinical immunotherapy experiments using a stepwise mathematical modeling strategy. | Jarrett, Angela M; Song, Patrick N; Reeves, Kirsten; Lima, Ernesto A B F; Larimer, Benjamin; Yankeelov, Thomas E; Sorace, Anna G | Mathematical biosciences | 37931781 | 2023 Dec |
| The chromatin landscape of the euryarchaeon Haloferax volcanii. | Marinov, Georgi K; Bagdatli, S Tansu; Wu, Tong; He, Chuan; Kundaje, Anshul; Greenleaf, William J | Genome biology | 37932847 | 2023 Nov 06 |
| Melanopsin activates divergent phototransduction pathways in intrinsically photosensitive retinal ganglion cell subtypes. | Contreras, Ely; Bhoi, Jacob D; Sonoda, Takuma; Birnbaumer, Lutz; Schmidt, Tiffany M | eLife | 37937828 | 2023 Nov 08 |
| Gene-based association study of rare variants in children of diverse ancestries implicates TNFRSF21 in the development of allergic asthma. | Clay, Selene; Alladina, Jehan; Smith, Neal P; Visness, Cynthia M; Wood, Robert A; O'Connor, George T; Cohen, Robyn T; Khurana Hershey, Gurjit K; Kercsmar, Carolyn M; Gruchalla, Rebecca S; Gill, Michelle A; Liu, Andrew H; Kim, Haejin; Kattan, Meyer; Bachar | The Journal of allergy and clinical immunology | 37944567 | 2024 Mar |
| Clonal haematopoiesis of indeterminate potential predicts incident cardiac arrhythmias. | Schuermans, Art; Vlasschaert, Caitlyn; Nauffal, Victor; Cho, So Mi Jemma; Uddin, Md Mesbah; Nakao, Tetsushi; Niroula, Abhishek; Klarqvist, Marcus D R; Weeks, Lachelle D; Lin, Amy E; Saadatagah, Seyedmohammad; Lannery, Kim; Wong, Megan; Hornsby, Whitney; L | European heart journal | 37952204 | 2024 Mar 07 |
| LEF1 isoforms regulate cellular senescence and aging. | Jia, Minxue; Sayed, Khaled; Kapetanaki, Maria G; Dion, William; Rosas, Lorena; Irfan, Saad; Valenzi, Eleanor; Mora, Ana L; Lafyatis, Robert A; Rojas, Mauricio; Zhu, Bokai; Benos, Panayiotis V | Aging cell | 37961030 | 2023 Dec |
| Sequence-ensemble-function relationships for disordered proteins in live cells. | Emenecker, Ryan J; Guadalupe, Karina; Shamoon, Nora M; Sukenik, Shahar; Holehouse, Alex S | bioRxiv : the preprint server for biology | 37961106 | 2023 Nov 13 |
| Comparative profiling of cellular gait on adhesive micropatterns defines statistical patterns of activity that underlie native and cancerous cell dynamics. | Ahn, John C; Coyle, Scott M | bioRxiv : the preprint server for biology | 37961146 | 2023 Oct 27 |
| Structure-Aware Annotation of Leucine-rich Repeat Domains. | Xu, Boyan; Cerbu, Alois; Lim, Daven; Tralie, Christopher J; Krasileva, Ksenia | bioRxiv : the preprint server for biology | 37961157 | 2023 Nov 01 |
| A Germline Point Mutation in the MYC-FBW7 Phosphodegron Initiates Hematopoietic Malignancies. | Freie, Brian; Carroll, Patrick A; Varnum-Finney, Barbara J; Ramani, Vijay; Bernstein, Irwin; Eisenman, Robert N | bioRxiv : the preprint server for biology | 37961183 | 2023 Oct 25 |
| Development of neural circuits for social motion perception in schooling fish. | Zada, David; Schulze, Lisanne; Yu, Jo-Hsien; Tarabishi, Princess; Napoli, Julia L; Lovett-Barron, Matthew | bioRxiv : the preprint server for biology | 37961196 | 2023 Oct 27 |
| Engineering Tripartite Gene Editing Machinery for Highly Efficient Non-Viral Targeted Genome Integration. | Nam, Hangu; Xie, Keqiang; Majumdar, Ishita; Yang, Shaobo; Starzyk, Jakob; Lee, Danna; Shan, Richard; Li, Jiahe; Wu, Hao | Research square | 37961210 | 2023 Oct 23 |
| Breast Cancer Macrophage Heterogeneity and Self-renewal are Determined by Spatial Localization. | Ben-Chetrit, Nir; Niu, Xiang; Sotelo, Jesus; Swett, Ariel D; Rajasekhar, Vinagolu K; Jiao, Maria S; Stewart, Caitlin M; Bhardwaj, Priya; Kottapalli, Sanjay; Ganesan, Saravanan; Loyher, Pierre-Louis; Potenski, Catherine; Hannuna, Assaf; Brown, Kristy A; Iyengar, Neil M; Giri, Dilip D; Lowe, Scott W; Healey, John H; Geissmann, Frederic; Sagi, Irit; Joyce, Johanna A; Landau, Dan A | bioRxiv : the preprint server for biology | 37961223 | 2023 Oct 27 |
| The shared genetic architecture and evolution of human language and musical rhythm. | Alagöz, Gökberk; Eising, Else; Mekki, Yasmina; Bignardi, Giacomo; Fontanillas, Pierre; 23andMe Research Team; Nivard, Michel G; Luciano, Michelle; Cox, Nancy J; Fisher, Simon E; Gordon, Reyna L | bioRxiv : the preprint server for biology | 37961248 | 2023 Nov 02 |
| Cas13-based amplification-free quantification of aberrant RNAs during influenza virus infection. | Lamb, Caitlin H; Pitré, Emmanuelle M; Elshina, Elizaveta; Rigby, Charlotte V; Bisht, Karishma; Jalal, Hamid; Myhrvold, Cameron; Te Velthuis, Aartjan J W | bioRxiv : the preprint server for biology | 37961440 | 2023 Nov 03 |
| Structure of the human heparan-α-glucosaminide N-acetyltransferase (HGSNAT). | Navratna, Vikas; Kumar, Arvind; Mosalaganti, Shyamal | bioRxiv : the preprint server for biology | 37961489 | 2023 Oct 26 |
| Spatially resolved DNP-assisted NMR illuminates the conformational ensemble of α-synuclein in intact viable cells. | Kragelj, Jaka; Ghosh, Rupam; Xiao, Yiling; Dumarieh, Rania; Lagasca, Dominique; Krishna, Sakshi; Frederick, Kendra K | bioRxiv : the preprint server for biology | 37961511 | 2023 Oct 25 |
| Hsp90 shapes adaptation by controlling the fitness consequences of regulatory variation. | Jakobson, Christopher M; Aguilar-Rodríguez, José; Jarosz, Daniel F | bioRxiv : the preprint server for biology | 37961536 | 2023 Nov 02 |
| Clinically relevant antibiotic resistance genes are linked to a limited set of taxa within gut microbiome worldwide. | Diebold, Peter J; Rhee, Matthew W; Shi, Qiaojuan; Trung, Nguyen Vinh; Umrani, Fayaz; Ahmed, Sheraz; Kulkarni, Vandana; Deshpande, Prasad; Alexander, Mallika; Thi Hoa, Ngo; Christakis, Nicholas A; Iqbal, Najeeha Talat; Ali, Syed Asad; Mathad, Jyoti S; Brito, Ilana L | Nature communications | 37963868 | 2023 Nov 14 |
| Leveraging vaccination-induced protective antibodies to define conserved epitopes on influenza N2 neuraminidase. | Lei, Ruipeng; Kim, Wooseob; Lv, Huibin; Mou, Zongjun; Scherm, Michael J; Schmitz, Aaron J; Turner, Jackson S; Tan, Timothy J C; Wang, Yiquan; Ouyang, Wenhao O; Liang, Weiwen; Rivera-Cardona, Joel; Teo, Chuyun; Graham, Claire S; Brooke, Christopher B; Presti, Rachel M; Mok, Chris K P; Krammer, Florian; Dai, Xinghong; Ellebedy, Ali H; Wu, Nicholas C | Immunity | 37967533 | 2023 Nov 14 |
| Single-cell, whole-embryo phenotyping of mammalian developmental disorders. | Huang, Xingfan; Henck, Jana; Qiu, Chengxiang; Sreenivasan, Varun K A; Balachandran, Saranya; Amarie, Oana V; Hrabě de Angelis, Martin; Behncke, Rose Yinghan; Chan, Wing-Lee; Despang, Alexandra; Dickel, Diane E; Duran, Madeleine; Feuchtinger, Annette; Fuchs, Helmut; Gailus-Durner, Valerie; Haag, Natja; Hägerling, Rene; Hansmeier, Nils; Hennig, Friederike; Marshall, Cooper; Rajderkar, Sudha; Ringel, Alessa; Robson, Michael; Saunders, Lauren M; da Silva-Buttkus, Patricia; Spielmann, Nadine; Srivatsan, Sanjay R; Ulferts, Sascha; Wittler, Lars; Zhu, Yiwen; Kalscheuer, Vera M; Ibrahim, Daniel M; Kurth, Ingo; Kornak, Uwe; Visel, Axel; Pennacchio, Len A; Beier, David R; Trapnell, Cole; Cao, Junyue; Shendure, Jay; Spielmann, Malte | Nature | 37968388 | 2023 Nov |
| Mechanism of target site selection by type V-K CRISPR-associated transposases. | George, Jerrin Thomas; Acree, Christopher; Park, Jung-Un; Kong, Muwen; Wiegand, Tanner; Pignot, Yanis Luca; Kellogg, Elizabeth H; Greene, Eric C; Sternberg, Samuel H | Science (New York, N.Y.) | 37972161 | 2023 Nov 17 |
| The Precision of Place Fields Governs Their Fate across Epochs of Experience. | Chiu, YuHung; Dong, Can; Krishnan, Seetha; Sheffield, Mark E J | eNeuro | 37973379 | 2023 Dec |
| Improved inference for vaccine-induced immune responses via shape-constrained methods. | Laha, Nilanjana; Moodie, Zoe; Huang, Ying; Luedtke, Alex | Electronic journal of statistics | 37974631 | 2022 |
| Intraspecific Variation of Transposable Elements Reveals Differences in the Evolutionary History of Fungal Phytopathogen Pathotypes. | Nakamoto, Anne A; Joubert, Pierre M; Krasileva, Ksenia V | Genome biology and evolution | 37975814 | 2023 Dec 01 |
| Stringent and complex sequence constraints of an IGHV1-69 broadly neutralizing antibody to influenza HA stem. | Teo, Qi Wen; Wang, Yiquan; Lv, Huibin; Tan, Timothy J C; Lei, Ruipeng; Mao, Kevin J; Wu, Nicholas C | Cell reports | 37976161 | 2023 Nov 28 |
| Efficient Estimation under Data Fusion. | Li, Sijia; Luedtke, Alex | Biometrika | 37982010 | 2023 Dec |
| Viral Attachment Blocking Chimera Composed of DNA Origami and Nanobody Inhibits Pseudorabies Virus Infection In Vitro. | Pradhan, Swechchha; Swanson, Carter J; Leff, Chloe; Tengganu, Isadonna; Bergeman, Melissa H; Wisna, Gde B M; Hogue, Ian B; Hariadi, Rizal F | ACS nano | 37982733 | 2023 Dec 12 |
| Inferring stochastic rates from heterogeneous snapshots of particle positions. | Miles, Christopher E; McKinley, Scott A; Ding, Fangyuan; Lehoucq, Richard B | ArXiv | 37986720 | 2023 Nov 08 |
| Sequence-ensemble-function relationships for disordered proteins in live cells. | Holehouse, Alex; Emenecker, Ryan; Guadalupe, Karina; Shamoon, Nora; Sukenik, Shahar | Research square | 37986812 | 2023 Nov 10 |
| Travel surveillance uncovers dengue virus dynamics and introductions in the Caribbean. | Taylor-Salmon, Emma; Hill, Verity; Paul, Lauren M; Koch, Robert T; Breban, Mallery I; Chaguza, Chrispin; Sodeinde, Afeez; Warren, Joshua L; Bunch, Sylvia; Cano, Natalia; Cone, Marshall; Eysoldt, Sarah; Garcia, Alezaundra; Gilles, Nicadia; Hagy, Andrew; Heberlein, Lea; Jaber, Rayah; Kassens, Elizabeth; Colarusso, Pamela; Davis, Amanda; Baudin, Samantha; Rico, Edhelene; Mejía-Echeverri, Álvaro; Scott, Blake; Stanek, Danielle; Zimler, Rebecca; Muñoz-Jordán, Jorge L; Santiago, Gilberto A; Adams, Laura E; Paz-Bailey, Gabriela; Spillane, Melanie; Katebi, Volha; Paulino-Ramírez, Robert; Mueses, Sayira; Peguero, Armando; Sánchez, Nelissa; Norman, Francesca F; Galán, Juan-Carlos; Huits, Ralph; Hamer, Davidson H; Vogels, Chantal B F; Morrison, Andrea; Michael, Scott F; Grubaugh, Nathan D | medRxiv : the preprint server for health sciences | 37986857 | 2023 Nov 12 |
| RNA structure modulates Cas13 activity and enables mismatch detection. | Kimchi, Ofer; Larsen, Benjamin B; Dunkley, Owen R S; Te Velthuis, Aartjan J W; Myhrvold, Cameron | bioRxiv : the preprint server for biology | 37987004 | 2023 Nov 07 |
| Site-Specific Arrangement and Structure Determination of Minor Groove Binding Molecules in Self-Assembled Three-Dimensional DNA Crystals. | Simmons, Chad R; Buchberger, Alex; Henry, Skylar J W; Novacek, Alexandra; Fahmi, Nour Eddine; MacCulloch, Tara; Stephanopoulos, Nicholas; Yan, Hao | Journal of the American Chemical Society | 37987645 | 2023 Dec 06 |
| Distinct value computations support rapid sequential decisions. | Mah, Andrew; Schiereck, Shannon S; Bossio, Veronica; Constantinople, Christine M | Nature communications | 37989741 | 2023 Nov 21 |
| Individual differences in neural markers of beat processing relate to spoken grammar skills in six-year-old children. | Persici, Valentina; Blain, Scott D; Iversen, John R; Key, Alexandra P; Kotz, Sonja A; Devin McAuley, J; Gordon, Reyna L | Brain and language | 37994830 | 2023 Nov |
| Utility of Mycobacterium tuberculosis genome sequencing snapshots to assess transmission dynamics over time. | Yuen, Courtney M; Huang, Chuan-Chin; Millones, Ana Karina; Calderon, Roger I; Manson, Abigail L; Jimenez, Judith; Contreras, Carmen; Earl, Ashlee M; Becerra, Mercedes C; Lecca, Leonid; Murray, Megan B | The Journal of infectious diseases | 37995298 | 2023 Nov 23 |
| Sensory cortical ensembles exhibit differential coupling to ripples in distinct hippocampal subregions. | Jeong, Huijeong; Namboodiri, Vijay Mohan K; Jung, Min Whan; Andermann, Mark L | Current biology : CB | 37995696 | 2023 Dec 04 |
| Efficient sex separation by exploiting differential alternative splicing of a dominant marker in Aedes aegypti. | Weng, Shih-Che; Antoshechkin, Igor; Marois, Eric; Akbari, Omar S | PLoS genetics | 38011259 | 2023 Nov |
| Olfactory learning alters navigation strategies and behavioral variability in C. elegans. | Chen, Kevin S; Pillow, Jonathan W; Leifer, Andrew M | ArXiv | 38013890 | 2023 Nov 13 |
| Proximity Labeling Expansion Microscopy (PL-ExM) resolves structure of the interactome. | Park, Sohyeon; Wang, Xiaorong; Li, Xiangpeng; Huang, Xiao; Fong, Katie C; Yu, Clinton; Tran, Arthur A; Scipioni, Lorenzo; Dai, Zhipeng; Huang, Lan; Shi, Xiaoyu | bioRxiv : the preprint server for biology | 38014020 | 2023 Nov 13 |
| Aberrant splicing exonizes C9ORF72 repeat expansion in ALS/FTD. | Yang, Suzhou; Wijegunawardana, Denethi; Sheth, Udit; Veire, Austin M; Salgado, Juliana M S; Agrawal, Manasi; Zhou, Jeffrey; Pereira, João D; Gendron, Tania F; Guo, Junjie U | bioRxiv : the preprint server for biology | 38014069 | 2023 Nov 14 |
| Modeling gut neuro-epithelial connections in a novel microfluidic device. | de Hoyos-Vega, Jose M; Yu, Xi; Gonzalez-Suarez, Alan M; Chen, Sisi; Mercado-Perez, Arnaldo; Krueger, Eugene; Hernandez, Jeric; Fedyshyn, Yaroslav; Druliner, Brooke R; Linden, David R; Beyder, Arthur; Revzin, Alexander | Microsystems & nanoengineering | 38025883 | 2023 |
| Deep Convolutional Mixture Density Network for Inverse Design of Layered Photonic Structures. | Unni, Rohit; Yao, Kan; Zheng, Yuebing | ACS photonics | 38031541 | 2020 Oct 21 |
| Broadband Forward Light Scattering by Architectural Design of Core-Shell Silicon Particles. | De Marco, Maria Letizia; Jiang, Taizhi; Fang, Jie; Lacomme, Sabrina; Zheng, Yuebing; Baron, Alexandre; Korgel, Brian A; Barois, Philippe; Drisko, Glenna L; Aymonier, Cyril | Advanced functional materials | 38031546 | 2021 Jun 23 |
| Opto-Thermoelectric Tweezers: Principles and Applications. | Pughazhendi, Agatian; Chen, Zhihan; Wu, Zilong; Li, Jingang; Zheng, Yuebing | Frontiers in physics | 38031585 | 2020 |
| Self-Assembled Nanocoatings Protect Microbial Fertilizers for Climate-Resilient Agriculture. | Burke, Benjamin; Fan, Gang; Wasuwanich, Pris; Moore, Evan B; Furst, Ariel L | JACS Au | 38034965 | 2023 Nov 27 |
| A global view of aging and Alzheimer's pathogenesis-associated cell population dynamics and molecular signatures in human and mouse brains. | Sziraki, Andras; Lu, Ziyu; Lee, Jasper; Banyai, Gabor; Anderson, Sonya; Abdulraouf, Abdulraouf; Metzner, Eli; Liao, Andrew; Banfelder, Jason; Epstein, Alexander; Schaefer, Chloe; Xu, Zihan; Zhang, Zehao; Gan, Li; Nelson, Peter T; Zhou, Wei; Cao, Junyue | Nature genetics | 38036784 | 2023 Dec |
| u-track3D: Measuring, navigating, and validating dense particle trajectories in three dimensions. | Roudot, Philippe; Legant, Wesley R; Zou, Qiongjing; Dean, Kevin M; Isogai, Tadamoto; Welf, Erik S; David, Ana F; Gerlich, Daniel W; Fiolka, Reto; Betzig, Eric; Danuser, Gaudenz | Cell reports methods | 38042149 | 2023 Dec 18 |
| Cationic peptides erase memories by removing synaptic AMPA receptors through endophilin-mediated endocytosis. | Stokes, Eric; Zhuang, Yinyin; Toledano, Michael; Vasquez, Jose; Azouz, Ghalia; Hui, May; Tyler, Isabella; Shi, Xiaoyu; Aoto, Jason; Beier, Kevin T | Research square | 38045269 | 2023 Nov 21 |
| A Foundation Model for Cell Segmentation. | Israel, Uriah; Marks, Markus; Dilip, Rohit; Li, Qilin; Schwartz, Morgan; Pradhan, Elora; Pao, Edward; Li, Shenyi; Pearson-Goulart, Alexander; Perona, Pietro; Gkioxari, Georgia; Barnowski, Ross; Yue, Yisong; Van Valen, David | bioRxiv : the preprint server for biology | 38045277 | 2023 Nov 20 |
| Enhancer regulatory networks globally connect non-coding breast cancer loci to cancer genes. | Wang, Yihan; Armendariz, Daniel; Wang, Lei; Zhao, Huan; Xie, Shiqi; Hon, Gary C | bioRxiv : the preprint server for biology | 38045327 | 2023 Nov 20 |
| Biological factors and statistical limitations prevent detection of most noncanonical proteins by mass spectrometry. | Wacholder, Aaron; Carvunis, Anne-Ruxandra | PLoS biology | 38048358 | 2023 Dec |
| A biotin targeting chimera (BioTAC) system to map small molecule interactomes in situ. | Tao, Andrew J; Jiang, Jiewei; Gadbois, Gillian E; Goyal, Pavitra; Boyle, Bridget T; Mumby, Elizabeth J; Myers, Samuel A; English, Justin G; Ferguson, Fleur M | Nature communications | 38049406 | 2023 Dec 04 |
| Whole-brain mapping reveals the divergent impact of ketamine on the dopamine system. | Datta, Malika S; Chen, Yannan; Chauhan, Shradha; Zhang, Jing; De La Cruz, Estanislao Daniel; Gong, Cheng; Tomer, Raju | Cell reports | 38052211 | 2023 Dec 26 |
| Engineered Heterochronic Parabiosis in 3D Microphysiological System for Identification of Muscle Rejuvenating Factors. | Lee, Yunki; Choi, Jeongmoon J; Ahn, Song Ih; Lee, Nan Hee; Han, Woojin M; Mohiuddin, Mahir; Shin, Eun Jung; Wood, Levi; Park, Ki Dong; Kim, YongTae; Jang, Young C | Advanced functional materials | 38053980 | 2020 Nov 11 |
| Tobacco smoke exposure recruits inflammatory airspace monocytes that establish permissive lung niches for Mycobacterium tuberculosis. | Corleis, Björn; Tzouanas, Constantine N; Wadsworth 2nd, Marc H; Cho, Josalyn L; Linder, Alice H; Schiff, Abigail E; Zessin, Björn; Stei, Fabian; Dorhoi, Anca; Dickey, Amy K; Medoff, Benjamin D; Shalek, Alex K; Kwon, Douglas S | Science translational medicine | 38055798 | 2023 Dec 06 |
| CytoDirect: A Nucleic Acid Nanodevice for Specific and Efficient Delivery of Functional Payloads to the Cytoplasm. | Yu, Lu; Xu, Yang; Al-Amin, Md; Jiang, Shuoxing; Sample, Matthew; Prasad, Abhay; Stephanopoulos, Nicholas; Šulc, Petr; Yan, Hao | Journal of the American Chemical Society | 38055928 | 2023 Dec 20 |
| Optimization of base editors for the functional correction of SMN2 as a treatment for spinal muscular atrophy. | Alves, Christiano R R; Ha, Leillani L; Yaworski, Rebecca; Sutton, Emma R; Lazzarotto, Cicera R; Christie, Kathleen A; Reilly, Aoife; Beauvais, Ariane; Doll, Roman M; de la Cruz, Demitri; Maguire, Casey A; Swoboda, Kathryn J; Tsai, Shengdar Q; Kothary, Ras | Nature biomedical engineering | 38057426 | 2024 Feb |
| Tracing developmental lineages. | Raj, Bushra | Nature methods | 38057508 | 2023 Dec |
| CD62L expression marks a functionally distinct subset of memory B cells. | Hanson, Christopher H; Henry, Brittany; Andhare, Pradhnesh; Lin, Frank J; Pak, Haley; Turner, Jackson S; Adams, Lucas J; Liu, Tom; Fremont, Daved H; Ellebedy, Ali H; Laidlaw, Brian J | Cell reports | 38060451 | 2023 Dec 26 |
| Systematic comparison of nonviral gene delivery strategies for efficient co-expression of two transgenes in human mesenchymal stem cells. | Kozisek, Tyler; Samuelson, Luke; Hamann, Andrew; Pannier, Angela K | Journal of biological engineering | 38062439 | 2023 Dec 07 |
| Transcriptional changes are tightly coupled to chromatin reorganization during cellular aging. | Braunger, Jana M; Cammarata, Louis V; Sornapudi, Trinadha Rao; Uhler, Caroline; Shivashankar, G V | Aging cell | 38062919 | 2023 Dec 07 |
| Evidence for a selective link between cooperation and individual recognition. | Tumulty, James P; Miller, Sara E; Van Belleghem, Steven M; Weller, Hannah I; Jernigan, Christopher M; Vincent, Sierra; Staudenraus, Regan J; Legan, Andrew W; Polnaszek, Timothy J; Uy, Floria M K; Walton, Alexander; Sheehan, Michael J | Current biology : CB | 38065097 | 2023 Dec 18 |
| Structure of the complete Saccharomyces cerevisiae Rpd3S-nucleosome complex. | Markert, Jonathan W; Vos, Seychelle M; Farnung, Lucas | Nature communications | 38065958 | 2023 Dec 08 |
| Cells use multiple mechanisms for cell-cycle arrest upon withdrawal of individual amino acids. | Rong, Yao; Darnell, Alicia M; Sapp, Kiera M; Vander Heiden, Matthew G; Spencer, Sabrina L | Cell reports | 38070134 | 2023 Dec 26 |
| In Vivo mRNA CAR T Cell Engineering via Targeted Ionizable Lipid Nanoparticles with Extrahepatic Tropism. | Billingsley, Margaret M; Gong, Ningqiang; Mukalel, Alvin J; Thatte, Ajay S; El-Mayta, Rakan; Patel, Savan K; Metzloff, Ann E; Swingle, Kelsey L; Han, Xuexiang; Xue, Lulu; Hamilton, Alex G; Safford, Hannah C; Alameh, Mohamad-Gabriel; Papp, Tyler E; Parhiz, Hamideh; Weissman, Drew; Mitchell, Michael J | Small (Weinheim an der Bergstrasse, Germany) | 38072809 | 2023 Dec 10 |
| Connectomic reconstruction predicts the functional organization of visual inputs to the navigation center of the Drosophila brain. | Garner, Dustin; Kind, Emil; Nern, Aljoscha; Houghton, Lucy; Zhao, Arthur; Sancer, Gizem; Rubin, Gerald M; Wernet, Mathias F; Kim, Sung Soo | bioRxiv : the preprint server for biology | 38076786 | 2023 Nov 30 |
| Distinct catecholaminergic pathways projecting to hippocampal CA1 transmit contrasting signals during behavior and learning. | Heer, Chad M; Sheffield, Mark E J | bioRxiv : the preprint server for biology | 38076843 | 2023 Nov 30 |
| A fluorogenic complementation tool kit for interrogating lipid droplet-organelle interaction. | Li, Xiao; Gamuyao, Rico; Wu, Ming-Lun; Cho, Woo Jung; Kurtz, Nathan B; King, Sharon V; Petersen, R A; Stabley, Daniel R; Lindow, Caleb; Climer, Leslie; Shirinifard, Abbas; Ferrara, Francesca; Throm, Robert E; Robinson, Camenzind G; Carisey, Alex; Tebo, Alison G; Chang, Chi-Lun | bioRxiv : the preprint server for biology | 38076863 | 2023 Nov 29 |
| Somatic Mosaicism in Amyotrophic Lateral Sclerosis and Frontotemporal Dementia Reveals Widespread Degeneration from Focal Mutations. | Zhou, Zinan; Kim, Junho; Huang, August Yue; Nolan, Matthew; Park, Junseok; Doan, Ryan; Shin, Taehwan; Miller, Michael B; Chhouk, Brian; Morillo, Katherine; Yeh, Rebecca C; Kenny, Connor; Neil, Jennifer E; Lee, Chao-Zong; Ohkubo, Takuya; Ravits, John; Ansorge, Olaf; Ostrow, Lyle W; Lagier-Tourenne, Clotilde; Lee, Eunjung Alice; Walsh, Christopher A | bioRxiv : the preprint server for biology | 38077003 | 2023 Dec 01 |
| The formation of ubiquitin rich condensates triggers recruitment of the ATG9A lipid transfer complex to initiate basal autophagy. | Broadbent, D G; McEwan, C M; Tsang, T M; Poole, D M; Naylor, B C; Price, J C; Schmidt, J C; Andersen, J L | bioRxiv : the preprint server for biology | 38077022 | 2023 Nov 29 |
| Ryanodine receptor 2 inhibition reduces dispersion of cardiac repolarization, improves contractile function, and prevents sudden arrhythmic death in failing hearts. | Joshi, Pooja; Estes, Shanea; DeMazumder, Deeptankar; Knollmann, Bjorn C; Dey, Swati | eLife | 38078905 | 2023 Dec 11 |
| Unsupervised learning of stationary and switching dynamical system models from Poisson observations. | Song, Christian Y; Shanechi, Maryam M | Journal of neural engineering | 38083862 | 2023 Dec 12 |
| A Visual, In-Expensive, and Wireless Capillary Rheometer for Characterizing Wholly-Cellular Bioinks. | Du, Jianyi; Lee, Stacey; Sinha, Soham; Solberg, Fredrik S; Ho, Debbie L L; Sampson, Joshua P; Wang, Qiuling; Tam, Tony; Skylar-Scott, Mark A | Small (Weinheim an der Bergstrasse, Germany) | 38085139 | 2023 Dec 12 |
| An embedded microfluidic valve for dynamic control of cellular communication. | DeAngelis, Mark A; Ruder, Warren C; LeDuc, Philip R | Applied physics letters | 38094664 | 2023 Dec 11 |
| Essential transcription factors for induced neuron differentiation. | Lu, Congyi; Garipler, Görkem; Dai, Chao; Roush, Timothy; Salome-Correa, Jose; Martin, Alex; Liscovitch-Brauer, Noa; Mazzoni, Esteban O; Sanjana, Neville E | Nature communications | 38102126 | 2023 Dec 15 |
| Rapid and Quantitative Functional Interrogation of Human Enhancer Variant Activity in Live Mice. | Hollingsworth, Ethan W; Liu, Taryn A; Jacinto, Sandra H; Chen, Cindy X; Alcantara, Joshua A; Kvon, Evgeny Z | bioRxiv : the preprint server for biology | 38105996 | 2023 Dec 10 |
| Regulatable assembly of synthetic microtubule architectures using engineered MAP-IDR condensates. | Chang, Chih-Chia; Coyle, Scott M | bioRxiv : the preprint server for biology | 38105997 | 2023 Dec 06 |
| Adhesome Receptor Clustering is Accompanied by the Colocalization of the Associated Genes in the Cell Nucleus. | Cammarata, Louis V; Uhler, Caroline; Shivashankar, G V | bioRxiv : the preprint server for biology | 38106037 | 2023 Dec 08 |
| Synthetic Lethality Screening with Recursive Feature Machines. | Cai, Cathy; Radhakrishnan, Adityanarayanan; Uhler, Caroline | bioRxiv : the preprint server for biology | 38106093 | 2023 Dec 05 |
| FLiPPR: A Processor for Limited Proteolysis (LiP) Mass Spectrometry Datasets Built on FragPipe. | Manriquez-Sandoval, Edgar; Brewer, Joy; Lule, Gabriela; Lopez, Samanta; Fried, Stephen D | bioRxiv : the preprint server for biology | 38106106 | 2023 Dec 05 |
| Rapid modeling of an ultra-rare epilepsy variant in wild-type mice by in utero prime editing. | Robertson, Colin D; Davis, Patrick; Richardson, Ryan R; Iffland 2nd, Philip H; Vieira, Daiana C O; Steyert, Marilyn; McKeon, Paige N; Romanowski, Andrea J; Crutcher, Garrett; Jašarević, Eldin; Wolff, Steffen B E; Mathur, Brian N; Crino, Peter B; Bale, Tracy L; Dick, Ivy E; Poulopoulos, Alexandros | bioRxiv : the preprint server for biology | 38106154 | 2023 Dec 19 |
| Towards A Wireless Image Sensor for Real-Time Fluorescence Microscopy in Cancer Therapy. | Rabbani, Rozhan; Najafiaghdam, Hossein; Roschelle, Micah; Papageorgiou, Efthymios Philip; Zhao, Biqi Rebekah; Ghanbari, Mohammad Meraj; Muller, Rikky; Stojanovic, Vladimir; Anwar, Mekhail | bioRxiv : the preprint server for biology | 38106190 | 2023 Dec 05 |
| Characterizing mobility patterns and malaria risk factors in semi-nomadic populations of Northern Kenya. | Meredith, Hannah R; Wesolowski, Amy; Okoth, Dennis; Maraga, Linda; Ambani, George; Chepkwony, Tabitha; Abel, Lucy; Kipkoech, Joseph; Lokoel, Gilchrist; Esimit, Daniel; Lokemer, Samuel; Maragia, James; O'Meara, Wendy Prudhomme; Obala, Andrew A | medRxiv : the preprint server for health sciences | 38106223 | 2023 Dec 09 |
| A Permissive Amide N-Methyltransferase for Dithiolopyrrolones. | Chen, Xiaoyan; Johnson, Rachel M; Li, Bo | ACS catalysis | 38106463 | 2023 Feb 03 |
| Layered mechanisms regulating the human mitochondrial NAD+ transporter SLC25A51. | Goyal, Shivansh; Cambronne, Xiaolu A | Biochemical Society transactions | 38108469 | 2023 Dec 20 |
| Engineered Antiviral Sensor Targets Infected Mosquitoes. | Dalla Benetta, Elena; López-Denman, Adam J; Li, Hsing-Han; Masri, Reem A; Brogan, Daniel J; Bui, Michelle; Yang, Ting; Li, Ming; Dunn, Michael; Klein, Melissa J; Jackson, Sarah; Catalan, Kyle; Blasdell, Kim R; Tng, Priscilla; Antoshechkin, Igor; Alphey, L | The CRISPR journal | 38108518 | 2023 Dec |
| Myomatrix arrays for high-definition muscle recording. | Chung, Bryce; Zia, Muneeb; Thomas, Kyle A; Michaels, Jonathan A; Jacob, Amanda; Pack, Andrea; Williams, Matthew J; Nagapudi, Kailash; Teng, Lay Heng; Arrambide, Eduardo; Ouellette, Logan; Oey, Nicole; Gibbs, Rhuna; Anschutz, Philip; Lu, Jiaao; Wu, Yu; Kashefi, Mehrdad; Oya, Tomomichi; Kersten, Rhonda; Mosberger, Alice C; O'Connell, Sean; Wang, Runming; Marques, Hugo; Mendes, Ana Rita; Lenschow, Constanze; Kondakath, Gayathri; Kim, Jeong Jun; Olson, William; Quinn, Kiara N; Perkins, Pierce; Gatto, Graziana; Thanawalla, Ayesha; Coltman, Susan; Kim, Taegyo; Smith, Trevor; Binder-Markey, Ben; Zaback, Martin; Thompson, Christopher K; Giszter, Simon; Person, Abigail; Goulding, Martyn; Azim, Eiman; Thakor, Nitish; O'Connor, Daniel; Trimmer, Barry; Lima, Susana Q; Carey, Megan R; Pandarinath, Chethan; Costa, Rui M; Pruszynski, J Andrew; Bakir, Muhannad; Sober, Samuel J | eLife | 38113081 | 2023 Dec 19 |
| ENPP1 is an innate immune checkpoint of the anticancer cGAMP-STING pathway in breast cancer. | Wang, Songnan; Böhnert, Volker; Joseph, Alby J; Sudaryo, Valentino; Skariah, Gemini; Swinderman, Jason T; Yu, Feiqiao B; Subramanyam, Vishvak; Wolf, Denise M; Lyu, Xuchao; Gilbert, Luke A; Van't Veer, Laura J; Goodarzi, Hani; Li, Lingyin | Proceedings of the National Academy of Sciences of the United States of America | 38117852 | 2023 Dec 26 |
| LRRC37B is a human modifier of voltage-gated sodium channels and axon excitability in cortical neurons. | Libé-Philippot, Baptiste; Lejeune, Amélie; Wierda, Keimpe; Louros, Nikolaos; Erkol, Emir; Vlaeminck, Ine; Beckers, Sofie; Gaspariunaite, Vaiva; Bilheu, Angéline; Konstantoulea, Katerina; Nyitrai, Hajnalka; De Vleeschouwer, Matthias; Vennekens, Kristel M; Vidal, Niels; Bird, Thomas W; Soto, Daniela C; Jaspers, Tom; Dewilde, Maarten; Dennis, Megan Y; Rousseau, Frederic; Comoletti, Davide; Schymkowitz, Joost; Theys, Tom; de Wit, Joris; Vanderhaeghen, Pierre | Cell | 38134874 | 2023 Dec 21 |
| Non-Viral RNA Delivery During Pregnancy: Opportunities and Challenges. | Chaudhary, Namit; Newby, Alexandra N; Whitehead, Kathryn A | Small (Weinheim an der Bergstrasse, Germany) | 38145340 | 2023 Dec 25 |
| Bond-selective fluorescence imaging with single-molecule sensitivity. | Wang, Haomin; Lee, Dongkwan; Cao, Yulu; Bi, Xiaotian; Du, Jiajun; Miao, Kun; Wei, Lu | Nature photonics | 38162388 | 2023 Oct |
| Bile acid-containing lipid nanoparticles enhance extrahepatic mRNA delivery. | Patel, Savan K; Billingsley, Margaret M; Mukalel, Alvin J; Thatte, Ajay S; Hamilton, Alex G; Gong, Ningqiang; El-Mayta, Rakan; Safford, Hannah C; Merolle, Maria; Mitchell, Michael J | Theranostics | 38164140 | 2024 |
| Mechanobiology of Hyaluronan: Connecting Biomechanics and Bioactivity in Musculoskeletal Tissues. | Chan, Deva D; Guilak, Farshid; Sah, Robert L; Calve, Sarah | Annual review of biomedical engineering | 38166186 | 2024 Jan 02 |
| Smart lattice light-sheet microscopy for imaging rare and complex cellular events. | Shi, Yu; Tabet, Jimmy S; Milkie, Daniel E; Daugird, Timothy A; Yang, Chelsea Q; Ritter, Alex T; Giovannucci, Andrea; Legant, Wesley R | Nature methods | 38167656 | 2024 Jan 02 |
| This is an illness. No one is supposed to be treated badly: Community-based stigma assessments in South Africa to inform TB stigma intervention design. | Foster, Isabel; Biewer, Amanda; Vanqa, Nosivuyile; Makanda, Goodman; Tisile, Phumeza; Hayward, Sally E; Wademan, Dillon T; Anthony, Michaile G; Mbuyamba, Rachel; Galloway, Michelle; Human, Wieda; Westhuizen, Helene-Mari; Friedland, Jon S; Marino-Medina, Andrew; Schoeman, Ingrid; Hoddinott, Graeme; Nathavitharana, Ruvandhi R | Research square | 38168425 | 2023 Dec 11 |
| Detection of mosaic and population-level structural variants with Sniffles2. | Smolka, Moritz; Paulin, Luis F; Grochowski, Christopher M; Horner, Dominic W; Mahmoud, Medhat; Behera, Sairam; Kalef-Ezra, Ester; Gandhi, Mira; Hong, Karl; Pehlivan, Davut; Scholz, Sonja W; Carvalho, Claudia M B; Proukakis, Christos; Sedlazeck, Fritz J | Nature biotechnology | 38168980 | 2024 Jan 02 |
| Characterization and visualization of tandem repeats at genome scale. | Dolzhenko, Egor; English, Adam; Dashnow, Harriet; De Sena Brandine, Guilherme; Mokveld, Tom; Rowell, William J; Karniski, Caitlin; Kronenberg, Zev; Danzi, Matt C; Cheung, Warren A; Bi, Chengpeng; Farrow, Emily; Wenger, Aaron; Chua, Khi Pin; Martínez-Cerdeño, Verónica; Bartley, Trevor D; Jin, Peng; Nelson, David L; Zuchner, Stephan; Pastinen, Tomi; Quinlan, Aaron R; Sedlazeck, Fritz J; Eberle, Michael A | Nature biotechnology | 38168995 | 2024 Jan 02 |
| The eRF1 degrader SRI-41315 acts as a molecular glue at the ribosomal decoding center. | Coelho, João P L; Yip, Matthew C J; Oltion, Keely; Taunton, Jack; Shao, Sichen | Nature chemical biology | 38172604 | 2024 Jan 03 |
| Predictive analyses of regulatory sequences with EUGENe. | Klie, Adam; Laub, David; Talwar, James V; Stites, Hayden; Jores, Tobias; Solvason, Joe J; Farley, Emma K; Carter, Hannah | Nature computational science | 38177592 | 2023 Nov |
| Cholecystokinin-A signaling regulates automaticity of pacemaker cardiomyocytes. | Ruan, Hongmei; Mandla, Ravi; Ravi, Namita; Galang, Giselle; Soe, Amanda W; Olgin, Jeffrey E; Lang, Di; Vedantham, Vasanth | Frontiers in physiology | 38179138 | 2023 |
| XIST directly regulates X-linked and autosomal genes in naive human pluripotent cells. | Dror, Iris; Chitiashvili, Tsotne; Tan, Shawn Y X; Cano, Clara T; Sahakyan, Anna; Markaki, Yolanda; Chronis, Constantinos; Collier, Amanda J; Deng, Weixian; Liang, Guohao; Sun, Yu; Afasizheva, Anna; Miller, Jarrett; Xiao, Wen; Black, Douglas L; Ding, Fangy | Cell | 38181737 | 2024 Jan 04 |
| PIEZO1-HaloTag hiPSCs: Bridging Molecular, Cellular and Tissue Imaging. | Bertaccini, Gabriella A; Evans, Elizabeth L; Nourse, Jamison L; Dickinson, George D; Liu, Gaoxiang; Casanellas, Ignasi; Seal, Sayan; Ly, Alan T; Holt, Jesse R; Yan, Shijun; Hui, Elliot E; Panicker, Mitradas M; Upadhyayula, Srigokul; Parker, Ian; Pathak, Medha M | bioRxiv : the preprint server for biology | 38187535 | 2023 Dec 23 |
| Reward Expectation Reduces Representational Drift in the Hippocampus. | Krishnan, Seetha; Sheffield, Mark E J | bioRxiv : the preprint server for biology | 38187677 | 2023 Dec 21 |
| STOPGAP, an open-source package for template matching, subtomogram alignment, and classification. | Wan, William; Khavnekar, Sagar; Wagner, Jonathan | bioRxiv : the preprint server for biology | 38187721 | 2023 Dec 21 |
| Structure of the human systemic RNAi defective transmembrane protein 1 (hSIDT1) reveals the conformational flexibility of its lipid binding domain. | Navratna, Vikas; Kumar, Arvind; Rana, Jaimin K; Mosalaganti, Shyamal | bioRxiv : the preprint server for biology | 38187772 | 2023 Dec 23 |
| Ketone bodies as chemical signals for the immune system. | Gonzatti, Michelangelo Bauwelz; Goldberg, Emily | American journal of physiology. Cell physiology | 38189135 | 2024 Jan 08 |
| Bacterial genome engineering using CRISPR-associated transposases. | Gelsinger, Diego Rivera; Vo, Phuc Leo H; Klompe, Sanne E; Ronda, Carlotta; Wang, Harris H; Sternberg, Samuel H | Nature protocols | 38216671 | 2024 Jan 12 |
| Covert consciousness. | Young, Michael J; Edlow, Brian L; Bodien, Yelena G | NeuroRehabilitation | 38217619 | 2024 |
| Pooled screening with next-generation gene editing tools. | Zhou, Liqun; Yang, Luojia; Feng, Yanzhi; Chen, Sidi | Current opinion in biomedical engineering | 38222973 | 2023 Dec |
| APOL1-mediated monovalent cation transport contributes to APOL1-mediated podocytopathy in kidney disease. | Datta, Somenath; Antonio, Brett M; Zahler, Nathan H; Theile, Jonathan W; Krafte, Doug; Zhang, Hengtao; Rosenberg, Paul B; Chaves, Alec B; Muoio, Deborah M; Zhang, Guofang; Silas, Daniel; Li, Guojie; Soldano, Karen; Nystrom, Sarah; Ferreira, Davis; Miller, | The Journal of clinical investigation | 38227370 | 2024 Jan 16 |
| Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics. | Marinos, Georgios; Hamerich, Inga K; Debray, Reena; Obeng, Nancy; Petersen, Carola; Taubenheim, Jan; Zimmermann, Johannes; Blackburn, Dana; Samuel, Buck S; Dierking, Katja; Franke, Andre; Laudes, Matthias; Waschina, Silvio; Schulenburg, Hinrich; Kaleta, C | Microbiology spectrum | 38230938 | 2024 Feb 06 |
| A cell type-aware framework for nominating non-coding variants in Mendelian regulatory disorders. | Lee, Arthur S; Ayers, Lauren J; Kosicki, Michael; Chan, Wai-Man; Fozo, Lydia N; Pratt, Brandon M; Collins, Thomas E; Zhao, Boxun; Rose, Matthew F; Sanchis-Juan, Alba; Fu, Jack M; Wong, Isaac; Zhao, Xuefang; Tenney, Alan P; Lee, Cassia; Laricchia, Kristen M; Barry, Brenda J; Bradford, Victoria R; Lek, Monkol; MacArthur, Daniel G; Lee, Eunjung Alice; Talkowski, Michael E; Brand, Harrison; Pennacchio, Len A; Engle, Elizabeth C | medRxiv : the preprint server for health sciences | 38234731 | 2023 Dec 27 |
| Genetically encoded tool for manipulation of ΔΨm identifies the latter as the driver of integrative stress response induced by ATP Synthase dysfunction. | Choe, Mangyu; Titov, Denis V | bioRxiv : the preprint server for biology | 38234735 | 2023 Dec 27 |
| Mapping cis- and trans-regulatory target genes of human-specific deletions. | Fair, Tyler; Pavlovic, Bryan J; Schaefer, Nathan K; Pollen, Alex A | bioRxiv : the preprint server for biology | 38234800 | 2023 Dec 28 |
| CRISPRmap: Sequencing-free optical pooled screens mapping multi-omic phenotypes in cells and tissue. | Gu, Jiacheng; Iyer, Abhishek; Wesley, Ben; Taglialatela, Angelo; Leuzzi, Giuseppe; Hangai, Sho; Decker, Aubrianna; Gu, Ruoyu; Klickstein, Naomi; Shuai, Yuanlong; Jankovic, Kristina; Parker-Burns, Lucy; Jin, Yinuo; Zhang, Jia Yi; Hong, Justin; Niu, Steve; Chou, Jacqueline; Landau, Dan A; Azizi, Elham; Chan, Edmond M; Ciccia, Alberto; Gaublomme, Jellert T | bioRxiv : the preprint server for biology | 38234835 | 2023 Dec 26 |
| Disclosing Results of Tests for Covert Consciousness: A Framework for Ethical Translation. | Young, Michael J; Kazazian, Karnig; Fischer, David; Lissak, India A; Bodien, Yelena G; Edlow, Brian L | Neurocritical care | 38243150 | 2024 Jan 19 |
| Behavioral screening of conserved RNA-binding proteins reveals CEY-1/YBX RNA-binding protein dysfunction leads to impairments in memory and cognition. | Hayden, Ashley N; Brandel, Katie L; Merlau, Paul R; Vijayakumar, Priyadharshini; Leptich, Emily J; Pietryk, Edward W; Gaytan, Elizabeth S; Ni, Connie W; Chao, Hsiao-Tuan; Rosenfeld, Jill A; Arey, Rachel N | bioRxiv : the preprint server for biology | 38260399 | 2024 Jan 06 |
| Phosphorylation of pyruvate dehydrogenase inversely associates with neuronal activity. | Yang, Dong; Wang, Yu; Qi, Tianbo; Zhang, Xi; Shen, Leyao; Ma, Jingrui; Pang, Zhengyuan; Lal, Neeraj K; McClatchy, Daniel B; Seradj, Saba Heydari; Leung, Verina H; Wang, Kristina; Xie, Yi; Polli, Filip S; Maximov, Anton; Gonzalez, Oscar Christian; de Lecea, Luis; Cline, Hollis T; Augustine, Vineet; Yates 3rd, John R; Ye, Li | Neuron | 38266644 | 2024 Jan 17 |
| Modular Phoneme Processing in Human Superior Temporal Gyrus. | Cleary, Daniel R; Tchoe, Youngbin; Bourhis, Andrew; Dickey, Charles W; Stedelin, Brittany; Ganji, Mehran; Lee, Sang Hoen; Lee, Jihwan; Siler, Dominic A; Brown, Erik C; Rosen, Burke Q; Kaestner, Erik; Yang, Jimmy C; Soper, Daniel J; Han, Seunggu Jude; Paul | bioRxiv : the preprint server for biology | 38293030 | 2024 Jan 19 |
| Characterization and comparison of human and mouse milk cells. | Doerfler, Rose; Yerneni, Saigopalakrishna; Newby, Alexandra; Chaudhary, Namit; Shu, Ashley; Fein, Katherine; Hofstatter Azambuja, Juliana; Whitehead, Kathryn A | PloS one | 38295101 | 2024 |
| CRISPR screen for protein inclusion formation uncovers a role for SRRD in the regulation of intermediate filament dynamics and aggresome assembly. | Sweeney, Katelyn M; Chantarawong, Sapanna; Barbieri, Edward M; Cajka, Greg; Liu, Matthew; Spruce, Lynn; Fazelinia, Hossein; Portz, Bede; Copley, Katie; Lapidot, Tomer; Duhamel, Lauren; Greenwald, Phoebe; Saida, Naseeb; Shalgi, Reut; Shorter, James; Shalem | PLoS genetics | 38315730 | 2024 Feb |
| DNA damage remodels the MITF interactome to increase melanoma genomic instability. | Binet, Romuald; Lambert, Jean-Philippe; Tomkova, Marketa; Tischfield, Samuel; Baggiolini, Arianna; Picaud, Sarah; Sarkar, Sovan; Louphrasitthiphol, Pakavarin; Dias, Diogo; Carreira, Suzanne; Humphrey, Timothy C; Fillipakopoulos, Panagis; White, Richard; G | Genes & development | 38316520 | 2024 Feb 13 |
| Neutrophil-like cells derived from the HL-60 cell-line as a genetically-tractable model for neutrophil degranulation. | Bhakta, Suhani B; Lundgren, Stefan M; Sesti, Bethany N; Flores, Barbara A; Akdogan, Emel; Collins, Sean R; Mercer, Frances | PloS one | 38324578 | 2024 |
| Covert cortical processing: a diagnosis in search of a definition. | Young, Michael J; Fecchio, Matteo; Bodien, Yelena G; Edlow, Brian L | Neuroscience of consciousness | 38327828 | 2024 |
| Independent inhibitory control mechanisms for aggressive motivation and action. | Minakuchi, Tomohito; Guthman, Eartha Mae; Acharya, Preeta; Hinson, Justin; Fleming, Weston; Witten, Ilana B; Oline, Stefan N; Falkner, Annegret L | Nature neuroscience | 38347201 | 2024 Feb 12 |
| O-GlcNAc forces an α-synuclein amyloid strain with notably diminished seeding and pathology. | Balana, Aaron T; Mahul-Mellier, Anne-Laure; Nguyen, Binh A; Horvath, Mian; Javed, Afraah; Hard, Eldon R; Jasiqi, Yllza; Singh, Preeti; Afrin, Shumaila; Pedretti, Rose; Singh, Virender; Lee, Virginia M-Y; Luk, Kelvin C; Saelices, Lorena; Lashuel, Hilal A; Pratt, Matthew R | Nature chemical biology | 38347213 | 2024 Feb 12 |
| Prior dengue virus serotype 3 infection modulates subsequent plasmablast responses to Zika virus infection in rhesus macaques. | Singh, Tulika; Miller, Itzayana G; Venkatayogi, Sravani; Webster, Helen; Heimsath, Holly J; Eudailey, Josh A; Dudley, Dawn M; Kumar, Amit; Mangan, Riley J; Thein, Amelia; Aliota, Matthew T; Newman, Christina M; Mohns, Mariel S; Breitbach, Meghan E; Berry, | mBio | 38349142 | 2024 Mar 13 |
| Histone variant H2BE enhances chromatin accessibility in neurons to promote synaptic gene expression and long-term memory. | Feierman, Emily R; Louzon, Sean; Prescott, Nicholas A; Biaco, Tracy; Gao, Qingzeng; Qiu, Qi; Choi, Kyuhyun; Palozola, Katherine C; Voss, Anna J; Mehta, Shreya; Quaye, Camille; Lynch, Katherine; Fuccillo, Marc; Wu, Hao; David, Yael; Korb, Erica | bioRxiv : the preprint server for biology | 38352334 | 2024 Jan 29 |
| MYC is sufficient to generate mid-life high-grade serous ovarian and uterine serous carcinomas in a p53-R270H mouse model. | Blackman, Alexandra; Rees, Amy C; Bowers, Robert R; Jones, Christian M; Vaena, Silvia G; Clark, Madison A; Carter, Shelby; Villamor, Evan D; Evans, Della; Emanuel, Anthony J; Fullbright, George; Long, David T; Spruill, Laura; Romeo, Martin J; Helke, Krist | bioRxiv : the preprint server for biology | 38352443 | 2024 Jan 29 |
| BRD4-mediated epigenetic regulation of endoplasmic reticulum-mitochondria contact sites is governed by the mitochondrial complex III. | Chen, Brandon; Lynn-Nguyen, Theophilus M; Jadhav, Pankaj; Halligan, Benjamin S; Rossiter, Nicholas J; Guerra, Rachel M; Koshkin, Sergei; Koo, Imhoi; Morlacchi, Pietro; Hanna, David A; Lin, Jason; Banerjee, Ruma; Pagliarini, David J; Patterson, Andrew D; M | bioRxiv : the preprint server for biology | 38352460 | 2024 Feb 04 |
| Psilocybin-enhanced fear extinction linked to bidirectional modulation of cortical ensembles. | Rogers, Sophie A; Heller, Elizabeth A; Corder, Gregory | bioRxiv : the preprint server for biology | 38352491 | 2024 Feb 04 |
| Keystone pathobionts associated with colorectal cancer promote oncogenic reprograming. | Jones, Josh; Shi, Qiaojuan; Nath, Rahul R; Brito, Ilana L | PloS one | 38363784 | 2024 |
| TMEM16 and TMEM63/OSCA proteins share a conserved potential to permeate ions and phospholipids. | Lowry, Augustus J; Liang, Pengfei; Wan, Y C Serena; Pei, Zhen-Ming; Yang, Huanghe; Zhang, Yang | bioRxiv : the preprint server for biology | 38370744 | 2024 Feb 05 |
| De novo mutations mediate phenotypic switching in an opportunistic human lung pathogen. | Poret, Alexandra J; Schaefers, Matthew; Merakou, Christina; Mansour, Kathryn E; Lagoudas, Georgia K; Cross, Ashley R; Goldberg, Joanna B; Kishony, Roy; Uluer, Ahmet Z; McAdam, Alexander J; Blainey, Paul C; Vargas, Sara O; Lieberman, Tami D; Priebe, Gregor | bioRxiv : the preprint server for biology | 38370793 | 2024 Feb 06 |
| Small-molecule-mediated control of the anti-tumour activity and off-tumour toxicity of a supramolecular bispecific T cell engager. | Gong, Ningqiang; Han, Xuexiang; Xue, Lulu; Billingsley, Margaret M; Huang, Xisha; El-Mayta, Rakan; Qin, Jingya; Sheppard, Neil C; June, Carl H; Mitchell, Michael J | Nature biomedical engineering | 38378820 | 2024 Feb 20 |
| EFFICIENT ESTIMATION OF THE MAXIMAL ASSOCIATION BETWEEN MULTIPLE PREDICTORS AND A SURVIVAL OUTCOME. | Huang, Tzu-Jung; Luedtke, Alex; McKeague, Ian W | Annals of statistics | 38405375 | 2023 Oct |
| Genetically engineered filamentous phage for bacterial detection using magnetic resonance imaging. | Borg, Raymond E; Ozbakir, Harun F; Xu, Binzhi; Li, Eugene; Fang, Xiwen; Peng, Huan; Chen, Irene A; Mukherjee, Arnab | Sensors & diagnostics | 38405385 | 2023 Jul 01 |
| North-south pathways, emerging variants, and high climate suitability characterize the recent spread of dengue virus serotypes 2 and 3 in the Dominican Republic. | Miguel, Isaac; Feliz, Edwin P; Agramonte, Robinson; Martinez, Pedro V; Vergara, Carlos; Imbert, Yvonne; De la Cruz, Lucia; de Castro, Nurys; Cedano, Odalis; De la Paz, Yamilka; Fonseca, Vagner; Santiago, Gilberto A; Muñoz-Jordán, Jorge L; Peguero, Armando | medRxiv : the preprint server for health sciences | 38405721 | 2024 Feb 15 |
| As a patient I do not belong to the clinic, I belong to the community. Co-developing a multi-level, person-centred tuberculosis stigma intervention in Cape Town, South Africa. | Hayward, Sally E; Vanqa, Nosivuyile; Makanda, Goodman; Tisile, Phumeza; Ngwatyu, Luthando; Foster, Isabel; Mcinziba, Abenathi; Biewer, Amanda; Mbuyamba, Rachel; Galloway, Michelle; Bunyula, Siyavuya; Westhuizen, Helene-Mari; Friedland, Jon S; Marino-Medin | Research square | 38405783 | 2024 Feb 08 |
| A nociceptive amygdala-striatal pathway for chronic pain aversion. | Wojick, Jessica A; Paranjapye, Alekh; Chiu, Juliann K; Mahmood, Malaika; Oswell, Corinna; Kimmey, Blake A; Wooldridge, Lisa M; McCall, Nora M; Han, Alan; Ejoh, Lindsay L; Chehimi, Samar Nasser; Crist, Richard C; Reiner, Benjamin C; Korb, Erica; Corder, Gr | bioRxiv : the preprint server for biology | 38405972 | 2024 Feb 13 |
| Using structure prediction of negative sense RNA virus nucleoproteins to assess evolutionary relationships. | Sabsay, Kimberly R; Te Velthuis, Aartjan J W | bioRxiv : the preprint server for biology | 38405982 | 2024 Feb 17 |
| Enhancer selectivity in space and time: from enhancer-promoter interactions to promoter activation. | Yang, Jin H; Hansen, Anders S | Nature reviews. Molecular cell biology | 38413840 | 2024 Feb 27 |
| Antigen Presenting Cell Mimetic Lipid Nanoparticles for Rapid mRNA CAR T Cell Cancer Immunotherapy. | Metzloff, Ann E; Padilla, Marshall S; Gong, Ningqiang; Billingsley, Margaret M; Han, Xuexiang; Merolle, Maria; Mai, David; Figueroa-Espada, Christian G; Thatte, Ajay S; Haley, Rebecca M; Mukalel, Alvin J; Hamilton, Alex G; Alameh, Mohamad-Gabriel; Weissma | Advanced materials (Deerfield Beach, Fla.) | 38419362 | 2024 Feb 28 |
| High-throughput barcoding of nanoparticles identifies cationic, degradable lipid-like materials for mRNA delivery to the lungs in female preclinical models. | Xue, Lulu; Hamilton, Alex G; Zhao, Gan; Xiao, Zebin; El-Mayta, Rakan; Han, Xuexiang; Gong, Ningqiang; Xiong, Xinhong; Xu, Junchao; Figueroa-Espada, Christian G; Shepherd, Sarah J; Mukalel, Alvin J; Alameh, Mohamad-Gabriel; Cui, Jiaxi; Wang, Karin; Vaughan | Nature communications | 38424061 | 2024 Feb 29 |
| Lipid nanoparticle structure and delivery route during pregnancy dictate mRNA potency, immunogenicity, and maternal and fetal outcomes. | Chaudhary, Namit; Newby, Alexandra N; Arral, Mariah L; Yerneni, Saigopalakrishna S; LoPresti, Samuel T; Doerfler, Rose; Petersen, Daria M Strelkova; Montoya, Catalina; Kim, Julie S; Fox, Bethany; Coon, Tiffany; Malaney, Angela; Sadovsky, Yoel; Whitehead, | Proceedings of the National Academy of Sciences of the United States of America | 38437545 | 2024 Mar 12 |
| Transcriptome analysis of polyploid giant cancer cells and their progeny reveals a functional role for p21 in polyploidization and depolyploidization. | White-Gilbertson, Shai; Lu, Ping; Saatci, Ozge; Sahin, Ozgur; Delaney, Joe R; Ogretmen, Besim; Voelkel-Johnson, Christina | The Journal of biological chemistry | 38447798 | 2024 Mar 04 |
| Construction of Reconfigurable and Polymorphic DNA Origami Assemblies with Coiled-Coil Patches and Patterns. | Teng, Teng; Bernal-Chanchavac, Julio; Stephanopoulos, Nicholas; Castro, Carlos E | Advanced science (Weinheim, Baden-Wurttemberg, Germany) | 38459678 | 2024 Mar 08 |
| Smart Magnetic Microrobots Learn to Swim with Deep Reinforcement Learning. | Behrens, Michael R; Ruder, Warren C | Advanced intelligent systems (Weinheim an der Bergstrasse, Germany) | 38463142 | 2022 Oct |
| Keratin 17 modulates the immune topography of pancreatic cancer. | Delgado-Coka, Lyanne A; Horowitz, Michael; Torrente-Goncalves, Mariana; Roa-Peña, Lucia; Leiton, Cindy V; Hasan, Mahmudul; Babu, Sruthi; Fassler, Danielle; Oentoro, Jaymie; Karen Bai, Ji-Dong; Petricoin, Emanuel F; Matrisian, Lynn M; Blais, Edik Matthew; | Research square | 38464123 | 2024 Feb 20 |
| Non-linear transcriptional responses to gradual modulation of transcription factor dosage. | Domingo, Júlia; Minaeva, Mariia; Morris, John A; Ziosi, Marcello; Sanjana, Neville E; Lappalainen, Tuuli | bioRxiv : the preprint server for biology | 38464330 | 2024 Mar 03 |
| Cell morphology best predicts tumorigenicity and metastasis in vivo across multiple TNBC cell lines of different metastatic potential. | Conner, Sydney J; Guarin, Justinne R; Le, Thanh T; Fatherree, Jackson P; Kelley, Charlotte; Payne, Samantha L; Parker, Savannah R; Bloomer, Hanan; Zhang, Crystal; Salhany, Kenneth; McGinn, Rachel A; Henrich, Emily; Yui, Anna; Srinivasan, Deepti; Borges, H | Breast cancer research : BCR | 38468326 | 2024 Mar 11 |
| Adversarial Monte Carlo Meta-Learning of Optimal Prediction Procedures. | Luedtke, Alex; Chung, Incheoul; Sofrygin, Oleg | Journal of machine learning research : JMLR | 38476310 | 2021 |
| Characterizing mobility patterns and malaria risk factors in semi-nomadic populations of Northern Kenya. | Meredith, Hannah R; Wesolowski, Amy; Okoth, Dennis; Maraga, Linda; Ambani, George; Chepkwony, Tabitha; Abel, Lucy; Kipkoech, Joseph; Lokoel, Gilchrist; Esimit, Daniel; Lokemer, Samuel; Maragia, James; Prudhomme O'Meara, Wendy; Obala, Andrew A | PLOS global public health | 38478562 | 2024 |
| Increased enhancer-promoter interactions during developmental enhancer activation in mammals. | Chen, Zhuoxin; Snetkova, Valentina; Bower, Grace; Jacinto, Sandra; Clock, Benjamin; Dizehchi, Atrin; Barozzi, Iros; Mannion, Brandon J; Alcaina-Caro, Ana; Lopez-Rios, Javier; Dickel, Diane E; Visel, Axel; Pennacchio, Len A; Kvon, Evgeny Z | Nature genetics | 38509385 | 2024 Mar 20 |
| Protein-altering variants at copy number-variable regions influence diverse human phenotypes. | Hujoel, Margaux L A; Handsaker, Robert E; Sherman, Maxwell A; Kamitaki, Nolan; Barton, Alison R; Mukamel, Ronen E; Terao, Chikashi; McCarroll, Steven A; Loh, Po-Ru | Nature genetics | 38548989 | 2024 Mar 28 |
| Distinct changes to hippocampal and medial entorhinal circuits emerge across the progression of cognitive deficits in epilepsy. | Feng, Yu; Diego, Keziah S; Dong, Zhe; Wick, Zoé Christenson; Page-Harley, Lucia; Page-Harley, Veronica; Schnipper, Julia; Lamsifer, Sophia I; Pennington, Zachary T; Vetere, Lauren M; Philipsberg, Paul A; Soler, Ivan; Jurkowski, Albert; Rosado, Christin J; | bioRxiv : the preprint server for biology | 38559224 | 2024 Mar 14 |
| Nonpathogenic E. coli engineered to surface display cytokines as a new platform for immunotherapy. | Yang, Shaobo; Sheffer, Michal; Kaplan, Isabel E; Wang, Zongqi; Tarannum, Mubin; Dinh, Khanhlinh; Abdulhamid, Yasmin; Shapiro, Roman; Porter, Rebecca; Soiffer, Robert; Ritz, Jerome; Koreth, John; Wei, Yun; Chen, Peiru; Zhang, Ke; Márquez-Pellegrin, Valeria | Research square | 38562821 | 2024 Mar 22 |
