Skip to main content

Program Publications

Publications Search by Program

Search Result

The search results on this publication page are automated on a monthly schedule based on acknowledgement of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.

Title Author Journal Name PubMedID Journal Abbreviation Publication Date
A Cell-Phone-Based Acoustofluidic Platform for Quantitative Point-of-Care Testing. Zhang L, Tian Z, Bachman H, Zhang P, Huang TJ ACS nano 32119517 ACS Nano 2020 Mar 24
Acoustic Microfluidics. Zhang P, Bachman H, Ozcelik A, Huang TJ Annual review of analytical chemistry (Palo Alto, Calif.) 32531185 Annu Rev Anal Chem (Palo Alto Calif) 2020 Jun 12
Acoustofluidic rotational tweezing enables high-speed contactless morphological phenotyping of zebrafish larvae. Chen C, Gu Y, Philippe J, Zhang P, Bachman H, Zhang J, Mai J, Rufo J, Rawls JF, Davis EE, Katsanis N, Huang TJ Nature communications 33602914 Nat Commun 2021 Feb 18
Label-free single-vesicle based surface enhanced Raman spectroscopy: A robust approach for investigating the biomolecular composition of small extracellular vesicles. Liu Z, Ng M, Srivastava S, Li T, Liu J, Phu TA, Mateescu B, Wang YT, Tsai CF, Liu T, Raffai RL, Xie YH PloS one 38889139 PLoS One 2024
Acoustofluidic Holography for Micro- to Nanoscale Particle Manipulation. Gu Y, Chen C, Rufo J, Shen C, Wang Z, Huang PH, Fu H, Zhang P, Cummer SA, Tian Z, Huang TJ ACS nano 32574491 ACS Nano 2020 Nov 24
Ultrasensitive amyloid β-protein quantification with high dynamic range using a hybrid graphene-gold surface-enhanced Raman spectroscopy platform. Yu X, Hayden EY, Wang P, Xia M, Liang O, Bai Y, Teplow DB, Xie YH Journal of Raman spectroscopy : JRS 33688113 J Raman Spectrosc 2020 Mar
The Feasibility of Early Alzheimer's Disease Diagnosis Using a Neural Network Hybrid Platform. Yu X, Srivastava S, Huang S, Hayden EY, Teplow DB, Xie YH Biosensors 36140138 Biosensors (Basel) 2022 Sep 13
An acoustofluidic scanning nanoscope using enhanced image stacking and processing. Jin G, Rich J, Xia J, He AJ, Zhao C, Huang TJ Microsystems & nanoengineering 35846176 Microsyst Nanoeng 2022
Controlling the Nucleation and Growth of Salt from Bodily Fluid for Enhanced Biosensing Applications. Srivastava S, Terai Y, Liu J, Capellini G, Xie YH Biosensors 38131777 Biosensors (Basel) 2023 Dec 6
Automating life science labs at the single-cell level through precise ultrasonic liquid sample ejection: PULSE. Zhang P, Tian Z, Jin K, Yang K, Collyer W, Rufo J, Upreti N, Dong X, Lee LP, Huang TJ Microsystems & nanoengineering 39567484 Microsyst Nanoeng 2024 Nov 20
Acoustofluidic Droplet Sorter Based on Single Phase Focused Transducers. Zhong R, Yang S, Ugolini GS, Naquin T, Zhang J, Yang K, Xia J, Konry T, Huang TJ Small (Weinheim an der Bergstrasse, Germany) 34658129 Small 2021 Nov
Acoustofluidic scanning fluorescence nanoscopy with large field of view. Jin G, Rich J, Xia J, Upreti N, Zhao C, Huang TJ Research square 37461478 Res Sq 2023 Jun 26
Acoustic Cell Separation Based on Density and Mechanical Properties. Xie Y, Mao Z, Bachman H, Li P, Zhang P, Ren L, Wu M, Huang TJ Journal of biomechanical engineering 32006021 J Biomech Eng 2020 Mar 1
Acoustic tweezers based on circular, slanted-finger interdigital transducers for dynamic manipulation of micro-objects. Kang P, Tian Z, Yang S, Yu W, Zhu H, Bachman H, Zhao S, Zhang P, Wang Z, Zhong R, Huang TJ Lab on a chip 32010910 Lab Chip 2020 Mar 3
A disposable acoustofluidic chip for nano/microparticle separation using unidirectional acoustic transducers. Zhao S, Wu M, Yang S, Wu Y, Gu Y, Chen C, Ye J, Xie Z, Tian Z, Bachman H, Huang PH, Xia J, Zhang P, Zhang H, Huang TJ Lab on a chip 32195522 Lab Chip 2020 Apr 7
Low-frequency flexural wave based microparticle manipulation. Bachman H, Gu Y, Rufo J, Yang S, Tian Z, Huang PH, Yu L, Huang TJ Lab on a chip 32154525 Lab Chip 2020 Apr 7
Acoustofluidics-Assisted Fluorescence-SERS Bimodal Biosensors. Hao N, Pei Z, Liu P, Bachman H, Naquin TD, Zhang P, Zhang J, Shen L, Yang S, Yang K, Zhao S, Huang TJ Small (Weinheim an der Bergstrasse, Germany) 33174375 Small 2020 Dec
Acoustohydrodynamic tweezers via spatial arrangement of streaming vortices. Zhu H, Zhang P, Zhong Z, Xia J, Rich J, Mai J, Su X, Tian Z, Bachman H, Rufo J, Gu Y, Kang P, Chakrabarty K, Witelski TP, Huang TJ Science advances 33523965 Sci Adv 2021 Jan
Gold Nanopyramid Arrays for Non-Invasive Surface-Enhanced Raman Spectroscopy-Based Gastric Cancer Detection via sEVs. Liu Z, Li T, Wang Z, Liu J, Huang S, Min BH, An JY, Kim KM, Kim S, Chen Y, Liu H, Kim Y, Wong DTW, Huang TJ, Xie YH ACS applied nano materials 36185166 ACS Appl Nano Mater 2022 Sep 23
Urinary Cell-Free DNA in Liquid Biopsy and Cancer Management. Salfer B, Li F, Wong DTW, Zhang L Clinical chemistry 36213956 Clin Chem 2022 Dec 6
Harmonic acoustics for dynamic and selective particle manipulation. Yang S, Tian Z, Wang Z, Rufo J, Li P, Mai J, Xia J, Bachman H, Huang PH, Wu M, Chen C, Lee LP, Huang TJ Nature materials 35332292 Nat Mater 2022 May
RNA Sequencing Analysis of Saliva exRNA. Kaczor-Urbanowicz KE, Wong DTW Methods in molecular biology (Clifton, N.J.) 36418678 Methods Mol Biol 2023
Acoustofluidics for simultaneous nanoparticle-based drug loading and exosome encapsulation. Wang Z, Rich J, Hao N, Gu Y, Chen C, Yang S, Zhang P, Huang TJ Microsystems & nanoengineering 35498337 Microsyst Nanoeng 2022
Acoustofluidic Salivary Exosome Isolation: A Liquid Biopsy Compatible Approach for Human Papillomavirus-Associated Oropharyngeal Cancer Detection. Wang Z, Li F, Rufo J, Chen C, Yang S, Li L, Zhang J, Cheng J, Kim Y, Wu M, Abemayor E, Tu M, Chia D, Spruce R, Batis N, Mehanna H, Wong DTW, Huang TJ The Journal of molecular diagnostics : JMD 31843276 J Mol Diagn 2020 Jan
Acoustofluidics-Assisted Engineering of Multifunctional Three-Dimensional Zinc Oxide Nanoarrays. Hao N, Liu P, Bachman H, Pei Z, Zhang P, Rufo J, Wang Z, Zhao S, Huang TJ ACS nano 32352741 ACS Nano 2020 May 26
Acoustic tweezer with complex boundary-free trapping and transport channel controlled by shadow waveguides. Li J, Shen C, Huang TJ, Cummer SA Science advances 34407929 Sci Adv 2021 Aug
Acoustoelectronic nanotweezers enable dynamic and large-scale control of nanomaterials. Zhang P, Rufo J, Chen C, Xia J, Tian Z, Zhang L, Hao N, Zhong Z, Gu Y, Chakrabarty K, Huang TJ Nature communications 34158489 Nat Commun 2021 Jun 22
Integrated Multiomics Analysis of Salivary Exosomes to Identify Biomarkers Associated with Changes in Mood States and Fatigue. Cohn W, Zhu C, Campagna J, Bilousova T, Spilman P, Teter B, Li F, Guo R, Elashoff D, Cole GM, Avidan A, Faull KF, Whitelegge J, Wong DTW, John V International journal of molecular sciences 35563647 Int J Mol Sci 2022 May 9
A sound approach to advancing healthcare systems: the future of biomedical acoustics. Rufo J, Zhang P, Zhong R, Lee LP, Huang TJ Nature communications 35710904 Nat Commun 2022 Jun 16
Microfluidic Isolation and Enrichment of Nanoparticles. Xie Y, Rufo J, Zhong R, Rich J, Li P, Leong KW, Huang TJ ACS nano 33252215 ACS Nano 2020 Dec 22
Acoustofluidic multimodal diagnostic system for Alzheimer's disease. Hao N, Wang Z, Liu P, Becker R, Yang S, Yang K, Pei Z, Zhang P, Xia J, Shen L, Wang L, Welsh-Bohmer KA, Sanders L, Lee LP, Huang TJ Biosensors & bioelectronics 34736099 Biosens Bioelectron 2022 Jan 15
Acoustofluidic multi-well plates for enrichment of micro/nano particles and cells. Liu P, Tian Z, Hao N, Bachman H, Zhang P, Hu J, Huang TJ Lab on a chip 32779677 Lab Chip 2020 Sep 21
Hardware Design and Fault-Tolerant Synthesis for Digital Acoustofluidic Biochips. Zhong Z, Zhu H, Zhang P, Morizio J, Huang TJ, Chakrabarty K IEEE transactions on biomedical circuits and systems 32816679 IEEE Trans Biomed Circuits Syst 2020 Oct
Acoustofluidic centrifuge for nanoparticle enrichment and separation. Gu Y, Chen C, Mao Z, Bachman H, Becker R, Rufo J, Wang Z, Zhang P, Mai J, Yang S, Zhang J, Zhao S, Ouyang Y, Wong DTW, Sadovsky Y, Huang TJ Science advances 33523836 Sci Adv 2021 Jan
Generating multifunctional acoustic tweezers in Petri dishes for contactless, precise manipulation of bioparticles. Tian Z, Wang Z, Zhang P, Naquin TD, Mai J, Wu Y, Yang S, Gu Y, Bachman H, Liang Y, Yu Z, Huang TJ Science advances 32917678 Sci Adv 2020 Sep
Deterministic droplet coding via acoustofluidics. Zhang P, Wang W, Fu H, Rich J, Su X, Bachman H, Xia J, Zhang J, Zhao S, Zhou J, Huang TJ Lab on a chip 33103674 Lab Chip 2020 Nov 24
Saliva Diagnostics. Nonaka T, Wong DTW Annual review of analytical chemistry (Palo Alto, Calif.) 35696523 Annu Rev Anal Chem (Palo Alto Calif) 2022 Jun 13
Saliva diagnostics: Salivaomics, saliva exosomics, and saliva liquid biopsy. Nonaka T, Wong DTW Journal of the American Dental Association (1939) 37500232 J Am Dent Assoc 2023 Aug
Acoustofluidic Scanning Nanoscope with High Resolution and Large Field of View. Jin G, Bachman H, Naquin TD, Rufo J, Hou S, Tian Z, Zhao C, Huang TJ ACS nano 32574033 ACS Nano 2020 Jul 28
Fabrication of tunable, high-molecular-weight polymeric nanoparticles via ultrafast acoustofluidic micromixing. Zhao S, Huang PH, Zhang H, Rich J, Bachman H, Ye J, Zhang W, Chen C, Xie Z, Tian Z, Kang P, Fu H, Huang TJ Lab on a chip 33978043 Lab Chip 2021 Jun 15
Reviews on Current Liquid Biopsy for Detection and Management of Pancreatic Cancers. Kaczor-Urbanowicz KE, Cheng J, King JC, Sedarat A, Pandol SJ, Farrell JJ, Wong DTW, Kim Y Pancreas 33003085 Pancreas 2020 Oct
An acoustofluidic device for efficient mixing over a wide range of flow rates. Bachman H, Chen C, Rufo J, Zhao S, Yang S, Tian Z, Nama N, Huang PH, Huang TJ Lab on a chip 32104816 Lab Chip 2020 Apr 7
Intelligent nanoscope for rapid nanomaterial identification and classification. Jin G, Hong S, Rich J, Xia J, Kim K, You L, Zhao C, Huang TJ Lab on a chip 35647808 Lab Chip 2022 Aug 9
Acoustofluidic separation enables early diagnosis of traumatic brain injury based on circulating exosomes. Wang Z, Wang H, Becker R, Rufo J, Yang S, Mace BE, Wu M, Zou J, Laskowitz DT, Huang TJ Microsystems & nanoengineering 34567734 Microsyst Nanoeng 2021
A solution to the biophysical fractionation of extracellular vesicles: Acoustic Nanoscale Separation via Wave-pillar Excitation Resonance (ANSWER). Zhang J, Chen C, Becker R, Rufo J, Yang S, Mai J, Zhang P, Gu Y, Wang Z, Ma Z, Xia J, Hao N, Tian Z, Wong DTW, Sadovsky Y, Lee LP, Huang TJ Science advances 36417505 Sci Adv 2022 Nov 25
Ring-shaped photoacoustic tweezers for single particle manipulation. Zhao Z, Xia J, Huang TJ, Zou J Optics letters 35167535 Opt Lett 2022 Feb 15
Acoustic tweezers for high-throughput single-cell analysis. Yang S, Rufo J, Zhong R, Rich J, Wang Z, Lee LP, Huang TJ Nature protocols 37468650 Nat Protoc 2023 Aug
The EV antibody database: An interactive database of curated antibodies for extracellular vesicle and nanoparticle research. Morey A, Ng M, Spanos M, Zhang P, Xu T, Cheung W, Chatterjee E, Gokulnath P, Carnel-Amar N, Soares Chiaretti AL, Nelson C, George J, Luo M, Chakraborty A, Perucci L, Jones JC, Hoff P, Franklin JL, Raffai RL, Das S, Routenberg DA, Nolan JP, Charest A, Laurent LC, Alexander RP Extracellular vesicle 38872853 Extracell Vesicle 2024 Jun
Surface engineering within a microchannel for hydrodynamic and self-assembled cell patterning. Rima XY, Walters N, Nguyen LTH, Reátegui E Biomicrofluidics 31933714 Biomicrofluidics 2020 Jan
Large-scale generation of functional mRNA-encapsulating exosomes via cellular nanoporation. Yang Z, Shi J, Xie J, Wang Y, Sun J, Liu T, Zhao Y, Zhao X, Wang X, Ma Y, Malkoc V, Chiang C, Deng W, Chen Y, Fu Y, Kwak KJ, Fan Y, Kang C, Yin C, Rhee J, Bertani P, Otero J, Lu W, Yun K, Lee AS, Jiang W, Teng L, Kim BYS, Lee LJ Nature biomedical engineering 31844155 Nat Biomed Eng 2020 Jan
Engineering a tunable micropattern-array assay to sort single extracellular vesicles and particles to detect RNA and protein in situ. Zhang J, Rima XY, Wang X, Nguyen LTH, Huntoon K, Ma Y, Palacio PL, Nguyen KT, Albert K, Duong-Thi MD, Walters N, Kwak KJ, Yoon MJ, Li H, Doon-Ralls J, Hisey CL, Lee D, Wang Y, Ha J, Scherler K, Fallen S, Lee I, Palmer AF, Jiang W, Magaña SM, Wang K, Kim BYS, Lee LJ, Reátegui E Journal of extracellular vesicles 37908159 J Extracell Vesicles 2023 Nov
Multi-Omics Resolves a Sharp Disease-State Shift between Mild and Moderate COVID-19. Su Y, Chen D, Yuan D, Lausted C, Choi J, Dai CL, Voillet V, Duvvuri VR, Scherler K, Troisch P, Baloni P, Qin G, Smith B, Kornilov SA, Rostomily C, Xu A, Li J, Dong S, Rothchild A, Zhou J, Murray K, Edmark R, Hong S, Heath JE, Earls J, Zhang R, Xie J, Li S, Roper R, Jones L, Zhou Y, Rowen L, Liu R, Mackay S, O'Mahony DS, Dale CR, Wallick JA, Algren HA, Zager MA, ISB-Swedish COVID19 Biobanking Unit, Wei W, Price ND, Huang S, Subramanian N, Wang K, Magis AT, Hadlock JJ, Hood L, Aderem A, Bluestone JA, Lanier LL, Greenberg PD, Gottardo R, Davis MM, Goldman JD, Heath JR Cell 33171100 Cell 2020 Dec 10
Immunomagnetic sequential ultrafiltration (iSUF) platform for enrichment and purification of extracellular vesicles from biofluids. Zhang J, Nguyen LTH, Hickey R, Walters N, Wang X, Kwak KJ, Lee LJ, Palmer AF, Reátegui E Scientific reports 33850163 Sci Rep 2021 Apr 13
Circulating exosomal microRNA expression patterns distinguish cardiac sarcoidosis from myocardial ischemia. Crouser ED, Julian MW, Bicer S, Ghai V, Kim TK, Maier LA, Gillespie M, Hamzeh NY, Wang K PloS one 33497386 PLoS One 2021
Integrated Antigenic and Nucleic Acid Detection in Single Virions and Extracellular Vesicles with Viral Content. Nguyen KT, Rima XY, Nguyen LTH, Wang X, Kwak KJ, Yoon MJ, Li H, Chiang CL, Doon-Ralls J, Scherler K, Fallen S, Godfrey SL, Wallick JA, Magaña SM, Palmer AF, Lee I, Nunn CC, Reeves KM, Kaplan HG, Goldman JD, Heath JR, Wang K, Pancholi P, Lee LJ, Reátegui E Advanced healthcare materials 38820600 Adv Healthc Mater 2025 Jan
Multiple early factors anticipate post-acute COVID-19 sequelae. Su Y, Yuan D, Chen DG, Ng RH, Wang K, Choi J, Li S, Hong S, Zhang R, Xie J, Kornilov SA, Scherler K, Pavlovitch-Bedzyk AJ, Dong S, Lausted C, Lee I, Fallen S, Dai CL, Baloni P, Smith B, Duvvuri VR, Anderson KG, Li J, Yang F, Duncombe CJ, McCulloch DJ, Rostomily C, Troisch P, Zhou J, Mackay S, DeGottardi Q, May DH, Taniguchi R, Gittelman RM, Klinger M, Snyder TM, Roper R, Wojciechowska G, Murray K, Edmark R, Evans S, Jones L, Zhou Y, Rowen L, Liu R, Chour W, Algren HA, Berrington WR, Wallick JA, Cochran RA, Micikas ME, ISB-Swedish COVID-19 Biobanking Unit, Wrin T, Petropoulos CJ, Cole HR, Fischer TD, Wei W, Hoon DSB, Price ND, Subramanian N, Hill JA, Hadlock J, Magis AT, Ribas A, Lanier LL, Boyd SD, Bluestone JA, Chu H, Hood L, Gottardo R, Greenberg PD, Davis MM, Goldman JD, Heath JR Cell 35216672 Cell 2022 Mar 3
An immunogold single extracellular vesicular RNA and protein ((Au) SERP) biochip to predict responses to immunotherapy in non-small cell lung cancer patients. Nguyen LTH, Zhang J, Rima XY, Wang X, Kwak KJ, Okimoto T, Amann J, Yoon MJ, Shukuya T, Chiang CL, Walters N, Ma Y, Belcher D, Li H, Palmer AF, Carbone DP, Lee LJ, Reátegui E Journal of extracellular vesicles 36093740 J Extracell Vesicles 2022 Sep
Microfluidic harvesting of breast cancer tumor spheroid-derived extracellular vesicles from immobilized microgels for single-vesicle analysis. Rima XY, Zhang J, Nguyen LTH, Rajasuriyar A, Yoon MJ, Chiang CL, Walters N, Kwak KJ, Lee LJ, Reátegui E Lab on a chip 35579189 Lab Chip 2022 Jun 28
Emerging role of extracellular vesicles in multiple sclerosis: From cellular surrogates to pathogenic mediators and beyond. Palacio PL, Pleet ML, Reátegui E, Magaña SM Journal of neuroimmunology 36934525 J Neuroimmunol 2023 Apr 15
Flow Virometry Quantification of Host Proteins on the Surface of HIV-1 Pseudovirus Particles. Burnie J, Tang VA, Welsh JA, Persaud AT, Thaya L, Jones JC, Guzzo C Viruses 33198254 Viruses 2020 Nov 12
Human red blood cells release microvesicles with distinct sizes and protein composition that alter neutrophil phagocytosis. de Oliveira Junior GP, Welsh JA, Pinckney B, Palu CC, Lu S, Zimmerman A, Barbosa RH, Sahu P, Noshin M, Gummuluru S, Tigges J, Jones JC, Ivanov AR, Ghiran IC Journal of extracellular biology 37942280 J Extracell Biol 2023 Nov
SnRNA sequencing defines signaling by RBC-derived extracellular vesicles in the murine heart. Valkov N, Das A, Tucker NR, Li G, Salvador AM, Chaffin MD, Pereira De Oliveira Junior G, Kur I, Gokulnath P, Ziegler O, Yeri A, Lu S, Khamesra A, Xiao C, Rodosthenous R, Srinivasan S, Toxavidis V, Tigges J, Laurent LC, Momma S, Kitchen R, Ellinor P, Ghiran I, Das S Life science alliance 34663679 Life Sci Alliance 2021 Dec
Quantification of Cellular Densities and Antigenic Properties using Magnetic Levitation. Thompson L, Pinckney B, Lu S, Gregory M, Tigges J, Ghiran I Journal of visualized experiments : JoVE 34057455 J Vis Exp 2021 May 17
Electrophoretic mobility shift as a molecular beacon-based readout for miRNA detection. Oliveira-Jr GP, Barbosa RH, Thompson L, Pinckney B, Murphy-Thornley M, Lu S, Jones J, Hansen CH, Tigges J, Wong WP, Ghiran IC Biosensors & bioelectronics 34062334 Biosens Bioelectron 2021 Oct 1
Minimum information to report about a flow cytometry experiment on extracellular vesicles: Communication from the ISTH SSC subcommittee on vascular biology. van der Pol E, Welsh JA, Nieuwland R Journal of thrombosis and haemostasis : JTH 34637195 J Thromb Haemost 2022 Jan
A simple, high-throughput method of protein and label removal from extracellular vesicle samples. Welsh JA, Killingsworth B, Kepley J, Traynor T, McKinnon K, Savage J, Appel D, Aldape K, Camphausen K, Berzofsky JA, Ivanov AR, Ghiran IH, Jones JC Nanoscale 33544111 Nanoscale 2021 Feb 18
Detection of Extracellular Vesicle RNA Using Molecular Beacons. Oliveira GP Jr, Zigon E, Rogers G, Davodian D, Lu S, Jovanovic-Talisman T, Jones J, Tigges J, Tyagi S, Ghiran IC iScience 31958756 iScience 2020 Jan 24
MIFlowCyt-EV: a framework for standardized reporting of extracellular vesicle flow cytometry experiments. Welsh JA, Van Der Pol E, Arkesteijn GJA, Bremer M, Brisson A, Coumans F, Dignat-George F, Duggan E, Ghiran I, Giebel B, Görgens A, Hendrix A, Lacroix R, Lannigan J, Libregts SFWM, Lozano-Andrés E, Morales-Kastresana A, Robert S, De Rond L, Tertel T, Tigges J, De Wever O, Yan X, Nieuwland R, Wauben MHM, Nolan JP, Jones JC Journal of extracellular vesicles 32128070 J Extracell Vesicles 2020
Detection and Sorting of Extracellular Vesicles and Viruses Using nanoFACS. Morales-Kastresana A, Welsh JA, Jones JC Current protocols in cytometry 33332760 Curr Protoc Cytom 2020 Dec
Rigor and reproducibility: status and challenges for single vesicle analysis. Nolan JP, Chiu DT, Welsh JA Extracellular vesicles and circulating nucleic acids 37284135 Extracell Vesicles Circ Nucl Acids 2022
The NanoFlow Repository. Arce JE, Welsh JA, Cook S, Tigges J, Ghiran I, Jones JC, Jackson A, Roth M, Milosavljevic A Bioinformatics (Oxford, England) 37285317 Bioinformatics 2023 Jun 1
Small Particle Fluorescence and Light Scatter Calibration Using FCM(PASS) Software. Welsh JA, Jones JC Current protocols in cytometry 32936529 Curr Protoc Cytom 2020 Sep
XDec-CHI reveals immunosuppressive interactions in pancreatic ductal adenocarcinoma. LaPlante EL, Liu D, Petrosyan V, Yao Q, Milosavljevic A iScience 36274954 iScience 2022 Oct 21
Extracellular Vesicle Refractive Index Derivation Utilizing Orthogonal Characterization. Pleet ML, Cook S, Tang VA, Stack E, Ford VJ, Lannigan J, Do N, Wenger E, Fraikin JL, Jacobson S, Jones JC, Welsh JA Nano letters 37788377 Nano Lett 2023 Oct 25
MPA(PASS) software enables stitched multiplex, multidimensional EV repertoire analysis and a standard framework for reporting bead-based assays. Welsh JA, Killingsworth B, Kepley J, Traynor T, Cook S, Savage J, Marte J, Lee MJ, Maeng HM, Pleet ML, Magana S, Gorgens A, Maire CL, Lamszus K, Ricklefs FL, Merino MJ, Linehan WM, Greten T, Cooks T, Harris CC, Apolo A, Abdel-Mageed A, Ivanov AR, Trepel JB, Roth M, Tkach M, Milosavljevic A, Théry C, LeBlanc A, Berzofsky JA, Ruppin E, Aldape K, Camphausen K, Gulley JL, Ghiran I, Jacobson S, Jones JC Cell reports methods 35474866 Cell Rep Methods 2022 Jan 24
A compendium of single extracellular vesicle flow cytometry. Welsh JA, Arkesteijn GJA, Bremer M, Cimorelli M, Dignat-George F, Giebel B, Görgens A, Hendrix A, Kuiper M, Lacroix R, Lannigan J, van Leeuwen TG, Lozano-Andrés E, Rao S, Robert S, de Rond L, Tang VA, Tertel T, Yan X, Wauben MHM, Nolan JP, Jones JC, Nieuwland R, van der Pol E Journal of extracellular vesicles 36759917 J Extracell Vesicles 2023 Feb
exRNA-eCLIP intersection analysis reveals a map of extracellular RNA binding proteins and associated RNAs across major human biofluids and carriers. LaPlante EL, Stürchler A, Fullem R, Chen D, Starner AC, Esquivel E, Alsop E, Jackson AR, Ghiran I, Pereira G, Rozowsky J, Chang J, Gerstein MB, Alexander RP, Roth ME, Franklin JL, Coffey RJ, Raffai RL, Mansuy IM, Stavrakis S, deMello AJ, Laurent LC, Wang YT, Tsai CF, Liu T, Jones J, Van Keuren-Jensen K, Van Nostrand E, Mateescu B, Milosavljevic A Cell genomics 37228754 Cell Genom 2023 May 10
Exomap1 mouse: a transgenic model for in vivo studies of exosome biology. Fordjour FK, Abuelreich S, Hong X, Chatterjee E, Lallai V, Ng M, Saftics A, Deng F, Carnel-Amar N, Wakimoto H, Shimizu K, Bautista M, Phu TA, Vu NK, Geiger PC, Raffai RL, Fowler CD, Das S, Christenson LK, Jovanovic-Talisman T, Gould SJ bioRxiv : the preprint server for biology 37398219 bioRxiv 2023 May 29
Mir-30d Regulates Cardiac Remodeling by Intracellular and Paracrine Signaling. Li J, Salvador AM, Li G, Valkov N, Ziegler O, Yeri A, Yang Xiao C, Meechoovet B, Alsop E, Rodosthenous RS, Kundu P, Huan T, Levy D, Tigges J, Pico AR, Ghiran I, Silverman MG, Meng X, Kitchen R, Xu J, Van Keuren-Jensen K, Shah R, Xiao J, Das S Circulation research 33092465 Circ Res 2021 Jan 8
A Novel Tissue Atlas and Online Tool for the Interrogation of Small RNA Expression in Human Tissues and Biofluids. Alsop E, Meechoovet B, Kitchen R, Sweeney T, Beach TG, Serrano GE, Hutchins E, Ghiran I, Reiman R, Syring M, Hsieh M, Courtright-Lim A, Valkov N, Whitsett TG, Rakela J, Pockros P, Rozowsky J, Gallego J, Huentelman MJ, Shah R, Nakaji P, Kalani MYS, Laurent L, Das S, Van Keuren-Jensen K Frontiers in cell and developmental biology 35317387 Front Cell Dev Biol 2022
Expanding the horizon of EV-RNAs: LncRNAs in EVs as biomarkers for disease pathways. Spanos M, Gokulnath P, Chatterjee E, Li G, Varrias D, Das S Extracellular vesicle 38188000 Extracell Vesicle 2023 Dec
Endocytosis blocks the vesicular secretion of exosome marker proteins. Ai Y, Guo C, Garcia-Contreras M, Sánchez B LS, Saftics A, Shodubi O, Raghunandan S, Xu J, Tsai SJ, Dong Y, Li R, Jovanovic-Talisman T, Gould SJ Science advances 38718108 Sci Adv 2024 May 10
Multiparametric profiling of HER2-enriched extracellular vesicles in breast cancer using Single Extracellular VEsicle Nanoscopy. Jiang N, Saftics A, Romano E, Ghaeli I, Resto C, Robles V, Das S, Van Keuren-Jensen K, Seewaldt VL, Jovanovic-Talisman T Journal of nanobiotechnology 39342336 J Nanobiotechnology 2024 Sep 28
Exomap1 mouse: A transgenic model for in vivo studies of exosome biology. Fordjour FK, Abuelreich S, Hong X, Chatterjee E, Lallai V, Ng M, Saftics A, Deng F, Carnel-Amar N, Wakimoto H, Shimizu K, Bautista M, Phu TA, Vu NK, Geiger PC, Raffai RL, Fowler CD, Das S, Christenson LK, Jovanovic-Talisman T, Gould SJ Extracellular vesicle 39372847 Extracell Vesicle 2023 Dec
A Novel Circulating MicroRNA for the Detection of Acute Myocarditis. Blanco-Domínguez R, Sánchez-Díaz R, de la Fuente H, Jiménez-Borreguero LJ, Matesanz-Marín A, Relaño M, Jiménez-Alejandre R, Linillos-Pradillo B, Tsilingiri K, Martín-Mariscal ML, Alonso-Herranz L, Moreno G, Martín-Asenjo R, García-Guimaraes MM, Bruno KA, Dauden E, González-Álvaro I, Villar-Guimerans LM, Martínez-León A, Salvador-Garicano AM, Michelhaugh SA, Ibrahim NE, Januzzi JL, Kottwitz J, Iliceto S, Plebani M, Basso C, Baritussio A, Seguso M, Marcolongo R, Ricote M, Fairweather D, Bueno H, Fernández-Friera L, Alfonso F, Caforio ALP, Pascual-Figal DA, Heidecker B, Lüscher TF, Das S, Fuster V, Ibáñez B, Sánchez-Madrid F, Martín P The New England journal of medicine 34042389 N Engl J Med 2021 May 27
Single Extracellular VEsicle Nanoscopy. Saftics A, Abuelreich S, Romano E, Ghaeli I, Jiang N, Spanos M, Lennon KM, Singh G, Das S, Van Keuren-Jensen K, Jovanovic-Talisman T Journal of extracellular vesicles 37422692 J Extracell Vesicles 2023 Jul
Distinct Stress-Dependent Signatures of Cellular and Extracellular tRNA-Derived Small RNAs. Li G, Manning AC, Bagi A, Yang X, Gokulnath P, Spanos M, Howard J, Chan PP, Sweeney T, Kitchen R, Li H, Laurent BD, Aranki SF, Kontaridis MI, Laurent LC, Van Keuren-Jensen K, Muehlschlegel J, Lowe TM, Das S Advanced science (Weinheim, Baden-Wurttemberg, Germany) 35373532 Adv Sci (Weinh) 2022 Jun
Current challenges and future directions for engineering extracellular vesicles for heart, lung, blood and sleep diseases. Li G, Chen T, Dahlman J, Eniola-Adefeso L, Ghiran IC, Kurre P, Lam WA, Lang JK, Marbán E, Martín P, Momma S, Moos M, Nelson DJ, Raffai RL, Ren X, Sluijter JPG, Stott SL, Vunjak-Novakovic G, Walker ND, Wang Z, Witwer KW, Yang PC, Lundberg MS, Ochocinska MJ, Wong R, Zhou G, Chan SY, Das S, Sundd P Journal of extracellular vesicles 36775986 J Extracell Vesicles 2023 Feb
HIPK1: a New Druggable Kinase Target for Treating Pathological Cardiac Hypertrophy. Spanos M, Gokulnath P, Chatterjee E, Varrias D, Sun L, Das S, Li G Journal of cardiovascular translational research 37326697 J Cardiovasc Transl Res 2024 Feb
Circulating extracellular vesicles in human cardiorenal syndrome promote renal injury in a kidney-on-chip system. Chatterjee E, Rodosthenous RS, Kujala V, Gokulnath P, Spanos M, Lehmann HI, de Oliveira GP, Shi M, Miller-Fleming TW, Li G, Ghiran IC, Karalis K, Lindenfeld J, Mosley JD, Lau ES, Ho JE, Sheng Q, Shah R, Das S JCI insight 37707956 JCI Insight 2023 Nov 22
Cardiac troponin T in extracellular vesicles as a novel biomarker in human cardiovascular disease. Lennon KM, Saftics A, Abuelreich S, Sahu P, Lehmann HI, Maddox AL, Bagabas R, Januzzi JL, Van Keuren-Jensen K, Shah R, Das S, Jovanovic-Talisman T Clinical and translational medicine 35988159 Clin Transl Med 2022 Aug
Single Extracellular VEsicle Nanoscopy-Universal Protocol (SEVEN-UP): Accessible Imaging Platform for Quantitative Characterization of Single Extracellular Vesicles. Saftics A, Purnell B, Beres B, Thompson S, Jiang N, Ghaeli I, Lima C, Armstrong B, Van Keuren-Jensen K, Jovanovic-Talisman T Analytical chemistry 39804668 Anal Chem 2025 Jan 28
Distinct Plasma Extracellular Vesicle Transcriptomes in Acute Decompensated Heart Failure Subtypes: A Liquid Biopsy Approach. Gokulnath P, Spanos M, Lehmann HI, Sheng Q, Rodosthenous R, Chaffin M, Varrias D, Chatterjee E, Hutchins E, Li G, Daaboul G, Rana F, Wang AM, Van Keuren-Jensen K, Ellinor PT, Shah R, Das S Circulation 38557125 Circulation 2024 Apr 2
Elevation of neural injury markers in patients with neurologic sequelae after hospitalization for SARS-CoV-2 infection. Spanos M, Shachar S, Sweeney T, Lehmann HI, Gokulnath P, Li G, Sigal GB, Nagaraj R, Bathala P, Rana F, Shah RV, Routenberg DA, Das S iScience 35937088 iScience 2022 Aug 19
Comparison of EV characterization by commercial high-sensitivity flow cytometers and a custom single-molecule flow cytometer. Kim J, Xu S, Jung SR, Nguyen A, Cheng Y, Zhao M, Fujimoto BS, Nelson W, Schiro P, Franklin JL, Higginbotham JN, Coffey RJ, Shi M, Vojtech LN, Hladik F, Tewari M, Tigges J, Ghiran I, Jovanovic-Talisman T, Laurent LC, Das S, Gololobova O, Witwer KW, Xu T, Charest A, Jensen KVK, Raffai RL, Jones JC, Welsh JA, Nolan JP, Chiu DT Journal of extracellular vesicles 39140467 J Extracell Vesicles 2024 Aug
MicroRNAs are associated with cardiac biomarkers, cardiac structure and function and incident outcomes in heart failure. Spahillari A, Jackson L, Varrias D, Michelhaugh SA, Januzzi JL, Shahideh B, Daghfal D, Valkov N, Murtagh G, Das S ESC heart failure 38321808 ESC Heart Fail 2024 Jun
Cardiomyocyte-derived circulating extracellular vesicles allow a non-invasive liquid biopsy of myocardium in health and disease. Spanos M, Gokulnath P, Li G, Hutchins E, Meechoovet B, Sheng Q, Chatterjee E, Sharma R, Carnel-Amar N, Lin C, Azzam C, Ghaeli I, Amancherla KV, Victorino JF, Garcia-Mansfield K, Pfeffer R, Sahu P, Lindman BR, Elmariah S, Gamazon ER, Betti MJ, Bledsoe X, Lance ML, Absi T, Su YR, Do N, Contreras MG, Varrias D, Kladas M, Radulovic M, Tsiachris D, Spanos A, Tsioufis K, Ellinor PT, Tucker NR, Januzzi JL, Pirrotte P, Jovanovic-Talisman T, Van Keuren-Jensen K, Shah R, Das S medRxiv : the preprint server for health sciences 39371135 medRxiv 2024 Sep 22
Phenotypic Biomarkers of Aqueous Extracellular Vesicles from Retinoblastoma Eyes. Amacker A, Peng CC, Jiang N, Sirivolu S, Higa N, Stachelek K, Reiser B, Kuhn P, Cobrinik D, Neviani P, Berry JL, Jovanovic-Talisman T, Xu L International journal of molecular sciences 39519212 Int J Mol Sci 2024 Oct 30
High-Throughput Counting and Superresolution Mapping of Tetraspanins on Exosomes Using a Single-Molecule Sensitive Flow Technique and Transistor-like Semiconducting Polymer Dots. Jiang Y, Andronico LA, Jung SR, Chen H, Fujimoto B, Vojtech L, Chiu DT Angewandte Chemie (International ed. in English) 33797851 Angew Chem Int Ed Engl 2021 Jun 7
Improving Multicolor Colocalization in Single-Vesicle Flow Cytometry with Vesicle Transit Time. Andronico LA, Jung SR, Fujimoto BS, Chiu DT Analytical chemistry 37403691 Anal Chem 2023 Jul 18
Sizing Extracellular Vesicles Using Membrane Dyes and a Single Molecule-Sensitive Flow Analyzer. Andronico LA, Jiang Y, Jung SR, Fujimoto BS, Vojtech L, Chiu DT Analytical chemistry 33784071 Anal Chem 2021 Apr 13
The influence of bio-behavioural factors on tumour biology: pathways and mechanisms. Antoni MH, Lutgendorf SK, Cole SW, Dhabhar FS, Sephton SE, McDonald PG, Stefanek M, Sood AK Nature reviews. Cancer 16498446 Nat Rev Cancer 2006 Mar
Stress hormone-mediated invasion of ovarian cancer cells. Sood AK, Bhatty R, Kamat AA, Landen CN, Han L, Thaker PH, Li Y, Gershenson DM, Lutgendorf S, Cole SW Clinical cancer research : an official journal of the American Association for Cancer Research 16428474 Clin Cancer Res 2006 Jan 15
Antiangiogenic and antitumor effects of SRC inhibition in ovarian carcinoma. Han LY, Landen CN, Trevino JG, Halder J, Lin YG, Kamat AA, Kim TJ, Merritt WM, Coleman RL, Gershenson DM, Shakespeare WC, Wang Y, Sundaramoorth R, Metcalf CA 3rd, Dalgarno DC, Sawyer TK, Gallick GE, Sood AK Cancer research 16951177 Cancer Res 2006 Sep 1
Vascular endothelial growth factor (VEGF) pathway as a therapeutic target in gynecologic malignancies. Frumovitz M, Sood AK Gynecologic oncology 17306693 Gynecol Oncol 2007 Mar
Exosomal miR-940 maintains SRC-mediated oncogenic activity in cancer cells: a possible role for exosomal disposal of tumor suppressor miRNAs. Rashed MH, Kanlikilicer P, Rodriguez-Aguayo C, Pichler M, Bayraktar R, Bayraktar E, Ivan C, Filant J, Silva A, Aslan B, Denizli M, Mitra R, Ozpolat B, Calin GA, Sood AK, Abd-Ellah MF, Helal GK, Berestein GL Oncotarget 28423620 Oncotarget 2017 Mar 21
The rise of genomic profiling in ovarian cancer. Previs RA, Sood AK, Mills GB, Westin SN Expert review of molecular diagnostics 27828713 Expert Rev Mol Diagn 2016 Dec
Preclinical Mammalian Safety Studies of EPHARNA (DOPC Nanoliposomal EphA2-Targeted siRNA). Wagner MJ, Mitra R, McArthur MJ, Baze W, Barnhart K, Wu SY, Rodriguez-Aguayo C, Zhang X, Coleman RL, Lopez-Berestein G, Sood AK Molecular cancer therapeutics 28265009 Mol Cancer Ther 2017 Jun
miRNA Deregulation in Cancer Cells and the Tumor Microenvironment. Rupaimoole R, Calin GA, Lopez-Berestein G, Sood AK Cancer discovery 26865249 Cancer Discov 2016 Mar
The clinical and biological significance of MIR-224 expression in colorectal cancer metastasis. Ling H, Pickard K, Ivan C, Isella C, Ikuo M, Mitter R, Spizzo R, Bullock M, Braicu C, Pileczki V, Vincent K, Pichler M, Stiegelbauer V, Hoefler G, Almeida MI, Hsiao A, Zhang X, Primrose J, Packham G, Liu K, Bojja K, Gafà R, Xiao L, Rossi S, Song JH, Vannini I, Fanini F, Kopetz S, Zweidler-McKay P, Wang X, Ionescu C, Irimie A, Fabbri M, Lanza G, Hamilton SR, Berindan-Neagoe I, Medico E, Mirnezami A, Calin GA, Nicoloso MS Gut 25804630 Gut 2016 Jun
Preclinical and clinical development of siRNA-based therapeutics. Ozcan G, Ozpolat B, Coleman RL, Sood AK, Lopez-Berestein G Advanced drug delivery reviews 25666164 Adv Drug Deliv Rev 2015 Jun 29
Exosomes as divine messengers: are they the Hermes of modern molecular oncology? Braicu C, Tomuleasa C, Monroig P, Cucuianu A, Berindan-Neagoe I, Calin GA Cell death and differentiation 25236394 Cell Death Differ 2015 Jan
Hypoxia promotes stem cell phenotypes and poor prognosis through epigenetic regulation of DICER. van den Beucken T, Koch E, Chu K, Rupaimoole R, Prickaerts P, Adriaens M, Voncken JW, Harris AL, Buffa FM, Haider S, Starmans MHW, Yao CQ, Ivan M, Ivan C, Pecot CV, Boutros PC, Sood AK, Koritzinsky M, Wouters BG Nature communications 25351418 Nat Commun 2014 Oct 29
Immunotherapy targeting folate receptor induces cell death associated with autophagy in ovarian cancer. Wen Y, Graybill WS, Previs RA, Hu W, Ivan C, Mangala LS, Zand B, Nick AM, Jennings NB, Dalton HJ, Sehgal V, Ram P, Lee JS, Vivas-Mejia PE, Coleman RL, Sood AK Clinical cancer research : an official journal of the American Association for Cancer Research 25416196 Clin Cancer Res 2015 Jan 15
miR-34a blocks osteoporosis and bone metastasis by inhibiting osteoclastogenesis and Tgif2. Krzeszinski JY, Wei W, Huynh H, Jin Z, Wang X, Chang TC, Xie XJ, He L, Mangala LS, Lopez-Berestein G, Sood AK, Mendell JT, Wan Y Nature 25043055 Nature 2014 Aug 28
The role of exosomal long non-coding RNAs in cancer drug resistance. De Los Santos MC, Dragomir MP, Calin GA Cancer drug resistance (Alhambra, Calif.) 31867576 Cancer Drug Resist 2019 Dec 19
Decrypting noncoding RNA interactions, structures, and functional networks. Fabbri M, Girnita L, Varani G, Calin GA Genome research 31434680 Genome Res 2019 Sep
The role of radiotherapy in metaplastic breast cancer: a propensity score-matched analysis of the SEER database. Li Y, Chen M, Pardini B, Dragomir MP, Lucci A, Calin GA Journal of translational medicine 31547814 J Transl Med 2019 Sep 23
Long Non-coding RNAs in Myeloid Malignancies. Zimta AA, Tomuleasa C, Sahnoune I, Calin GA, Berindan-Neagoe I Frontiers in oncology 31681586 Front Oncol 2019
GnRH-R-Targeted Lytic Peptide Sensitizes BRCA Wild-type Ovarian Cancer to PARP Inhibition. Ma S, Pradeep S, Villar-Prados A, Wen Y, Bayraktar E, Mangala LS, Kim MS, Wu SY, Hu W, Rodriguez-Aguayo C, Leuschner C, Liang X, Ram PT, Schlacher K, Coleman RL, Sood AK Molecular cancer therapeutics 30926640 Mol Cancer Ther 2019 May
Circular RNAs in Cancer. Bach DH, Lee SK, Sood AK Molecular therapy. Nucleic acids 30861414 Mol Ther Nucleic Acids 2019 Jun 7
MiR-1287-5p inhibits triple negative breast cancer growth by interaction with phosphoinositide 3-kinase CB, thereby sensitizing cells for PI3Kinase inhibitors. Schwarzenbacher D, Klec C, Pasculli B, Cerk S, Rinner B, Karbiener M, Ivan C, Barbano R, Ling H, Wulf-Goldenberg A, Stanzer S, Rinnerthaler G, Stoeger H, Bauernhofer T, Haybaeck J, Hoefler G, Jahn SW, Parrella P, Calin GA, Pichler M Breast cancer research : BCR 30709367 Breast Cancer Res 2019 Feb 1
The Extracellular RNA Communication Consortium: Establishing Foundational Knowledge and Technologies for Extracellular RNA Research. Das S, Extracellular RNA Communication Consortium, Ansel KM, Bitzer M, Breakefield XO, Charest A, Galas DJ, Gerstein MB, Gupta M, Milosavljevic A, McManus MT, Patel T, Raffai RL, Rozowsky J, Roth ME, Saugstad JA, Van Keuren-Jensen K, Weaver AM, Laurent LC Cell 30951667 Cell 2019 Apr 4
exRNA Atlas Analysis Reveals Distinct Extracellular RNA Cargo Types and Their Carriers Present across Human Biofluids. Murillo OD, Thistlethwaite W, Rozowsky J, Subramanian SL, Lucero R, Shah N, Jackson AR, Srinivasan S, Chung A, Laurent CD, Kitchen RR, Galeev T, Warrell J, Diao JA, Welsh JA, Hanspers K, Riutta A, Burgstaller-Muehlbacher S, Shah RV, Yeri A, Jenkins LM, Ahsen ME, Cordon-Cardo C, Dogra N, Gifford SM, Smith JT, Stolovitzky G, Tewari AK, Wunsch BH, Yadav KK, Danielson KM, Filant J, Moeller C, Nejad P, Paul A, Simonson B, Wong DK, Zhang X, Balaj L, Gandhi R, Sood AK, Alexander RP, Wang L, Wu C, Wong DTW, Galas DJ, Van Keuren-Jensen K, Patel T, Jones JC, Das S, Cheung KH, Pico AR, Su AI, Raffai RL, Laurent LC, Roth ME, Gerstein MB, Milosavljevic A Cell 30951672 Cell 2019 Apr 4
Clinical utility of circulating non-coding RNAs - an update. Anfossi S, Babayan A, Pantel K, Calin GA Nature reviews. Clinical oncology 29784926 Nat Rev Clin Oncol 2018 Sep
Presence of Circulating miR-145, miR-155, and miR-382 in Exosomes Isolated from Serum of Breast Cancer Patients and Healthy Donors. Gonzalez-Villasana V, Rashed MH, Gonzalez-Cantú Y, Bayraktar R, Menchaca-Arredondo JL, Vazquez-Guillen JM, Rodriguez-Padilla C, Lopez-Berestein G, Resendez-Perez D Disease markers 30891102 Dis Markers 2019
Profiling the circulating miRnome reveals a temporal regulation of the bone injury response. Silva AM, Almeida MI, Teixeira JH, Ivan C, Oliveira J, Vasconcelos D, Neves N, Ribeiro-Machado C, Cunha C, Barbosa MA, Calin GA, Santos SG Theranostics 30083269 Theranostics 2018
2'-OMe-phosphorodithioate-modified siRNAs show increased loading into the RISC complex and enhanced anti-tumour activity. Wu SY, Yang X, Gharpure KM, Hatakeyama H, Egli M, McGuire MH, Nagaraja AS, Miyake TM, Rupaimoole R, Pecot CV, Taylor M, Pradeep S, Sierant M, Rodriguez-Aguayo C, Choi HJ, Previs RA, Armaiz-Pena GN, Huang L, Martinez C, Hassell T, Ivan C, Sehgal V, Singhania R, Han HD, Su C, Kim JH, Dalton HJ, Kovvali C, Keyomarsi K, McMillan NA, Overwijk WW, Liu J, Lee JS, Baggerly KA, Lopez-Berestein G, Ram PT, Nawrot B, Sood AK Nature communications 24619206 Nat Commun 2014 Mar 12
Platelets reduce anoikis and promote metastasis by activating YAP1 signaling. Haemmerle M, Taylor ML, Gutschner T, Pradeep S, Cho MS, Sheng J, Lyons YM, Nagaraja AS, Dood RL, Wen Y, Mangala LS, Hansen JM, Rupaimoole R, Gharpure KM, Rodriguez-Aguayo C, Yim SY, Lee JS, Ivan C, Hu W, Lopez-Berestein G, Wong ST, Karlan BY, Levine DA, Liu J, Afshar-Kharghan V, Sood AK Nature communications 28827520 Nat Commun 2017 Aug 21
Cancer-associated fibroblasts regulate endothelial adhesion protein LPP to promote ovarian cancer chemoresistance. Leung CS, Yeung TL, Yip KP, Wong KK, Ho SY, Mangala LS, Sood AK, Lopez-Berestein G, Sheng J, Wong ST, Birrer MJ, Mok SC The Journal of clinical investigation 29251630 J Clin Invest 2018 Feb 1
XPO1/CRM1 Inhibition Causes Antitumor Effects by Mitochondrial Accumulation of eIF5A. Miyake T, Pradeep S, Wu SY, Rupaimoole R, Zand B, Wen Y, Gharpure KM, Nagaraja AS, Hu W, Cho MS, Dalton HJ, Previs RA, Taylor ML, Hisamatsu T, Kang Y, Liu T, Shacham S, McCauley D, Hawke DH, Wiktorowicz JE, Coleman RL, Sood AK Clinical cancer research : an official journal of the American Association for Cancer Research 25878333 Clin Cancer Res 2015 Jul 15
Advances and Challenges of Liposome Assisted Drug Delivery. Sercombe L, Veerati T, Moheimani F, Wu SY, Sood AK, Hua S Frontiers in pharmacology 26648870 Front Pharmacol 2015
MicroRNAs in cancer: from developmental genes in worms to their clinical application in patients. Pichler M, Calin GA British journal of cancer 26158421 Br J Cancer 2015 Aug 11
Reciprocal positive selection for weakness - preventing olaparib resistance by inhibiting BRCA2. Rytelewski M, Maleki Vareki S, Mangala LS, Romanow L, Jiang D, Pradeep S, Rodriguez-Aguayo C, Lopez-Berestein G, Figueredo R, Ferguson PJ, Vincent M, Sood AK, Koropatnick JD Oncotarget 26959114 Oncotarget 2016 Apr 12
Dll4 Inhibition plus Aflibercept Markedly Reduces Ovarian Tumor Growth. Huang J, Hu W, Hu L, Previs RA, Dalton HJ, Yang XY, Sun Y, McGuire M, Rupaimoole R, Nagaraja AS, Kang Y, Liu T, Nick AM, Jennings NB, Coleman RL, Jaffe RB, Sood AK Molecular cancer therapeutics 27009216 Mol Cancer Ther 2016 Jun
Liposomal siRNA nanocarriers for cancer therapy. Ozpolat B, Sood AK, Lopez-Berestein G Advanced drug delivery reviews 24384374 Adv Drug Deliv Rev 2014 Feb
Dual Metronomic Chemotherapy with Nab-Paclitaxel and Topotecan Has Potent Antiangiogenic Activity in Ovarian Cancer. Previs RA, Armaiz-Pena GN, Lin YG, Davis AN, Pradeep S, Dalton HJ, Hansen JM, Merritt WM, Nick AM, Langley RR, Coleman RL, Sood AK Molecular cancer therapeutics 26516159 Mol Cancer Ther 2015 Dec
Data Normalization Strategies for MicroRNA Quantification. Schwarzenbach H, da Silva AM, Calin G, Pantel K Clinical chemistry 26408530 Clin Chem 2015 Nov
MicroRNAs in cancer therapeutics: "from the bench to the bedside". Monroig-Bosque Pdel C, Rivera CA, Calin GA Expert opinion on biological therapy 26372796 Expert Opin Biol Ther 2015
Erythropoietin Stimulates Tumor Growth via EphB4. Pradeep S, Huang J, Mora EM, Nick AM, Cho MS, Wu SY, Noh K, Pecot CV, Rupaimoole R, Stein MA, Brock S, Wen Y, Xiong C, Gharpure K, Hansen JM, Nagaraja AS, Previs RA, Vivas-Mejia P, Han HD, Hu W, Mangala LS, Zand B, Stagg LJ, Ladbury JE, Ozpolat B, Alpay SN, Nishimura M, Stone RL, Matsuo K, Armaiz-Peña GN, Dalton HJ, Danes C, Goodman B, Rodriguez-Aguayo C, Kruger C, Schneider A, Haghpeykar S, Jaladurgam P, Hung MC, Coleman RL, Liu J, Li C, Urbauer D, Lopez-Berestein G, Jackson DB, Sood AK Cancer cell 26481148 Cancer Cell 2015 Nov 9
MicroRNA Processing and Human Cancer. Ohtsuka M, Ling H, Doki Y, Mori M, Calin GA Journal of clinical medicine 26308063 J Clin Med 2015 Aug 21
Nanotechnology: Future of Oncotherapy. Gharpure KM, Wu SY, Li C, Lopez-Berestein G, Sood AK Clinical cancer research : an official journal of the American Association for Cancer Research 26180057 Clin Cancer Res 2015 Jul 15
Macrophages Facilitate Resistance to Anti-VEGF Therapy by Altered VEGFR Expression. Dalton HJ, Pradeep S, McGuire M, Hailemichael Y, Ma S, Lyons Y, Armaiz-Pena GN, Previs RA, Hansen JM, Rupaimoole R, Gonzalez-Villasana V, Cho MS, Wu SY, Mangala LS, Jennings NB, Hu W, Langley R, Mu H, Andreeff M, Bar-Eli M, Overwijk W, Ram P, Lopez-Berestein G, Coleman RL, Sood AK Clinical cancer research : an official journal of the American Association for Cancer Research 28855350 Clin Cancer Res 2017 Nov 15
Chitosan Nanoparticles for miRNA Delivery. Denizli M, Aslan B, Mangala LS, Jiang D, Rodriguez-Aguayo C, Lopez-Berestein G, Sood AK Methods in molecular biology (Clifton, N.J.) 28730442 Methods Mol Biol 2017
Metformin blocks MYC protein synthesis in colorectal cancer via mTOR-4EBP-eIF4E and MNK1-eIF4G-eIF4E signaling. Shen P, Reineke LC, Knutsen E, Chen M, Pichler M, Ling H, Calin GA Molecular oncology 30221473 Mol Oncol 2018 Nov
PRKRA/PACT Expression Promotes Chemoresistance of Mucinous Ovarian Cancer. Hisamatsu T, McGuire M, Wu SY, Rupaimoole R, Pradeep S, Bayraktar E, Noh K, Hu W, Hansen JM, Lyons Y, Gharpure KM, Nagaraja AS, Mangala LS, Mitamura T, Rodriguez-Aguayo C, Eun YG, Rose J, Bartholomeusz G, Ivan C, Lee JS, Matsuo K, Frumovitz M, Wong KK, Lopez-Berestein G, Sood AK Molecular cancer therapeutics 30305341 Mol Cancer Ther 2019 Jan
The Interplay between MicroRNAs and the Components of the Tumor Microenvironment in B-Cell Malignancies. El-Daly SM, Bayraktar R, Anfossi S, Calin GA International journal of molecular sciences 32403283 Int J Mol Sci 2020 May 11
Non-Coding RNAs as Cancer Hallmarks in Chronic Lymphocytic Leukemia. Fabris L, Juracek J, Calin G International journal of molecular sciences 32937758 Int J Mol Sci 2020 Sep 14
The Long Noncoding RNA CCAT2 Induces Chromosomal Instability Through BOP1-AURKB Signaling. Chen B, Dragomir MP, Fabris L, Bayraktar R, Knutsen E, Liu X, Tang C, Li Y, Shimura T, Ivkovic TC, De Los Santos MC, Anfossi S, Shimizu M, Shah MY, Ling H, Shen P, Multani AS, Pardini B, Burks JK, Katayama H, Reineke LC, Huo L, Syed M, Song S, Ferracin M, Oki E, Fromm B, Ivan C, Bhuvaneshwar K, Gusev Y, Mimori K, Menter D, Sen S, Matsuyama T, Uetake H, Vasilescu C, Kopetz S, Parker-Thornburg J, Taguchi A, Hanash SM, Girnita L, Slaby O, Goel A, Varani G, Gagea M, Li C, Ajani JA, Calin GA Gastroenterology 32805281 Gastroenterology 2020 Dec
HuR controls glutaminase RNA metabolism. Adamoski D, M Dos Reis L, Mafra ACP, Corrêa-da-Silva F, Moraes-Vieira PMM, Berindan-Neagoe I, Calin GA, Dias SMG Nature communications 38965208 Nat Commun 2024 Jul 4
Effect of interleukin-8 gene silencing with liposome-encapsulated small interfering RNA on ovarian cancer cell growth. Merritt WM, Lin YG, Spannuth WA, Fletcher MS, Kamat AA, Han LY, Landen CN, Jennings N, De Geest K, Langley RR, Villares G, Sanguino A, Lutgendorf SK, Lopez-Berestein G, Bar-Eli MM, Sood AK Journal of the National Cancer Institute 18314475 J Natl Cancer Inst 2008 Mar 5
Focal adhesion kinase targeting using in vivo short interfering RNA delivery in neutral liposomes for ovarian carcinoma therapy. Halder J, Kamat AA, Landen CN Jr, Han LY, Lutgendorf SK, Lin YG, Merritt WM, Jennings NB, Chavez-Reyes A, Coleman RL, Gershenson DM, Schmandt R, Cole SW, Lopez-Berestein G, Sood AK Clinical cancer research : an official journal of the American Association for Cancer Research 16914580 Clin Cancer Res 2006 Aug 15
The fusion of two worlds: non-coding RNAs and extracellular vesicles--diagnostic and therapeutic implications (Review). Sato-Kuwabara Y, Melo SA, Soares FA, Calin GA International journal of oncology 25338714 Int J Oncol 2015 Jan
Rac1/Pak1/p38/MMP-2 Axis Regulates Angiogenesis in Ovarian Cancer. Gonzalez-Villasana V, Fuentes-Mattei E, Ivan C, Dalton HJ, Rodriguez-Aguayo C, Fernandez-de Thomas RJ, Aslan B, Del C Monroig P, Velazquez-Torres G, Previs RA, Pradeep S, Kahraman N, Wang H, Kanlikilicer P, Ozpolat B, Calin G, Sood AK, Lopez-Berestein G Clinical cancer research : an official journal of the American Association for Cancer Research 25595279 Clin Cancer Res 2015 May 1
Molecular pathways: microRNAs, cancer cells, and microenvironment. Berindan-Neagoe I, Calin GA Clinical cancer research : an official journal of the American Association for Cancer Research 25512634 Clin Cancer Res 2014 Dec 15
Hypoxia-upregulated microRNA-630 targets Dicer, leading to increased tumor progression. Rupaimoole R, Ivan C, Yang D, Gharpure KM, Wu SY, Pecot CV, Previs RA, Nagaraja AS, Armaiz-Pena GN, McGuire M, Pradeep S, Mangala LS, Rodriguez-Aguayo C, Huang L, Bar-Eli M, Zhang W, Lopez-Berestein G, Calin GA, Sood AK Oncogene 26725326 Oncogene 2016 Aug 18
Targeting microRNAs as key modulators of tumor immune response. Paladini L, Fabris L, Bottai G, Raschioni C, Calin GA, Santarpia L Journal of experimental & clinical cancer research : CR 27349385 J Exp Clin Cancer Res 2016 Jun 27
Bisphosphonates inhibit stellate cell activity and enhance antitumor effects of nanoparticle albumin-bound paclitaxel in pancreatic ductal adenocarcinoma. Gonzalez-Villasana V, Rodriguez-Aguayo C, Arumugam T, Cruz-Monserrate Z, Fuentes-Mattei E, Deng D, Hwang RF, Wang H, Ivan C, Garza RJ, Cohen E, Gao H, Armaiz-Pena GN, Del C Monroig-Bosque P, Philip B, Rashed MH, Aslan B, Erdogan MA, Gutierrez-Puente Y, Ozpolat B, Reuben JM, Sood AK, Logsdon C, Lopez-Berestein G Molecular cancer therapeutics 25193509 Mol Cancer Ther 2014 Nov
An updated h-index measures both the primary and total scientific output of a researcher. Bucur O, Almasan A, Zubarev R, Friedman M, Nicolson GL, Sumazin P, Leabu M, Nikolajczyk BS, Avram D, Kunej T, Calin GA, Godwin AK, Adami HO, Zaphiropoulos PG, Richardson DR, Schmitt-Ulms G, Westerblad H, Keniry M, Grau GE, Carbonetto S, Stan RV, Popa-Wagner A, Takhar K, Baron BW, Galardy PJ, Yang F, Data D, Fadare O, Yeo KJ, Gabreanu GR, Andrei S, Soare GR, Nelson MA, Liehn EA Discoveries (Craiova, Romania) 26504901 Discoveries (Craiova) 2015 Jul-Sep
Targeting the centriolar replication factor STIL synergizes with DNA damaging agents for treatment of ovarian cancer. Rabinowicz N, Mangala LS, Brown KR, Checa-Rodriguez C, Castiel A, Moskovich O, Zarfati G, Trakhtenbrot L, Levy-Barda A, Jiang D, Rodriguez-Aguayo C, Pradeep S, van Praag Y, Lopez-Berestein G, David A, Novikov I, Huertas P, Rottapel R, Sood AK, Izraeli S Oncotarget 28423708 Oncotarget 2017 Apr 18
Regulation of hnRNPA1 by microRNAs controls the miR-18a-K-RAS axis in chemotherapy-resistant ovarian cancer. Rodriguez-Aguayo C, Monroig PDC, Redis RS, Bayraktar E, Almeida MI, Ivan C, Fuentes-Mattei E, Rashed MH, Chavez-Reyes A, Ozpolat B, Mitra R, Sood AK, Calin GA, Lopez-Berestein G Cell discovery 28904816 Cell Discov 2017
Understanding the Genomic Ultraconservations: T-UCRs and Cancer. Fabris L, Calin GA International review of cell and molecular biology 28729024 Int Rev Cell Mol Biol 2017
Cellular and viral microRNAs in sepsis: mechanisms of action and clinical applications. Giza DE, Fuentes-Mattei E, Bullock MD, Tudor S, Goblirsch MJ, Fabbri M, Lupu F, Yeung SJ, Vasilescu C, Calin GA Cell death and differentiation 27740627 Cell Death Differ 2016 Dec
A Novel Compound ARN-3236 Inhibits Salt-Inducible Kinase 2 and Sensitizes Ovarian Cancer Cell Lines and Xenografts to Paclitaxel. Zhou J, Alfraidi A, Zhang S, Santiago-O'Farrill JM, Yerramreddy Reddy VK, Alsaadi A, Ahmed AA, Yang H, Liu J, Mao W, Wang Y, Takemori H, Vankayalapati H, Lu Z, Bast RC Jr Clinical cancer research : an official journal of the American Association for Cancer Research 27678456 Clin Cancer Res 2017 Apr 15
PRKCI promotes immune suppression in ovarian cancer. Sarkar S, Bristow CA, Dey P, Rai K, Perets R, Ramirez-Cardenas A, Malasi S, Huang-Hobbs E, Haemmerle M, Wu SY, McGuire M, Protopopov A, Jiang S, Liu JF, Hirsch MS, Chang Q, Lazar AJ, Sood AK, Drapkin R, DePinho R, Draetta G, Chin L Genes & development 28698296 Genes Dev 2017 Jun 1
Plasma Viral miRNAs Indicate a High Prevalence of Occult Viral Infections. Fuentes-Mattei E, Giza DE, Shimizu M, Ivan C, Manning JT, Tudor S, Ciccone M, Kargin OA, Zhang X, Mur P, do Amaral NS, Chen M, Tarrand JJ, Lupu F, Ferrajoli A, Keating MJ, Vasilescu C, Yeung SJ, Calin GA EBioMedicine 28465156 EBioMedicine 2017 Jun
Dendritic Cell-derived Extracellular Vesicles mediate Mesenchymal Stem/Stromal Cell recruitment. Silva AM, Almeida MI, Teixeira JH, Maia AF, Calin GA, Barbosa MA, Santos SG Scientific reports 28490808 Sci Rep 2017 May 10
Phase II trial of bevacizumab with dose-dense paclitaxel as first-line treatment in patients with advanced ovarian cancer. Fleming ND, Coleman RL, Tung C, Westin SN, Hu W, Sun Y, Bhosale P, Munsell MF, Sood AK Gynecologic oncology 28774461 Gynecol Oncol 2017 Oct
Antitumor and Antiangiogenic Effects of Aspirin-PC in Ovarian Cancer. Huang Y, Lichtenberger LM, Taylor M, Bottsford-Miller JN, Haemmerle M, Wagner MJ, Lyons Y, Pradeep S, Hu W, Previs RA, Hansen JM, Fang D, Dorniak PL, Filant J, Dial EJ, Shen F, Hatakeyama H, Sood AK Molecular cancer therapeutics 27638860 Mol Cancer Ther 2016 Dec
Metronomic docetaxel in PRINT nanoparticles and EZH2 silencing have synergistic antitumor effect in ovarian cancer. Gharpure KM, Chu KS, Bowerman CJ, Miyake T, Pradeep S, Mangala SL, Han HD, Rupaimoole R, Armaiz-Pena GN, Rahhal TB, Wu SY, Luft JC, Napier ME, Lopez-Berestein G, DeSimone JM, Sood AK Molecular cancer therapeutics 24755199 Mol Cancer Ther 2014 Jul
Differential platelet levels affect response to taxane-based therapy in ovarian cancer. Bottsford-Miller J, Choi HJ, Dalton HJ, Stone RL, Cho MS, Haemmerle M, Nick AM, Pradeep S, Zand B, Previs RA, Pecot CV, Crane EK, Hu W, Lutgendorf SK, Afshar-Kharghan V, Sood AK Clinical cancer research : an official journal of the American Association for Cancer Research 25473001 Clin Cancer Res 2015 Feb 1
Junk DNA and the long non-coding RNA twist in cancer genetics. Ling H, Vincent K, Pichler M, Fodde R, Berindan-Neagoe I, Slack FJ, Calin GA Oncogene 25619839 Oncogene 2015 Sep 24
Role of miRNAs in immune responses and immunotherapy in cancer. Cortez MA, Anfossi S, Ramapriyan R, Menon H, Atalar SC, Aliru M, Welsh J, Calin GA Genes, chromosomes & cancer 30578699 Genes Chromosomes Cancer 2019 Apr
The involvement of microRNA in the pathogenesis of Richter syndrome. Van Roosbroeck K, Bayraktar R, Calin S, Bloehdorn J, Dragomir MP, Okubo K, Bertilaccio MTS, Zupo S, You MJ, Gaidano G, Rossi D, Chen SS, Chiorazzi N, Thompson PA, Ferrajoli A, Bertoni F, Stilgenbauer S, Keating MJ, Calin GA Haematologica 30409799 Haematologica 2019 May
Predicting Novel Therapies and Targets: Regulation of Notch3 by the Bromodomain Protein BRD4. Villar-Prados A, Wu SY, Court KA, Ma S, LaFargue C, Chowdhury MA, Engelhardt MI, Ivan C, Ram PT, Wang Y, Baggerly K, Rodriguez-Aguayo C, Lopez-Berestein G, Ming-Yang S, Maloney DJ, Yoshioka M, Strovel JW, Roszik J, Sood AK Molecular cancer therapeutics 30420565 Mol Cancer Ther 2019 Feb
The Interaction Between Two Worlds: MicroRNAs and Toll-Like Receptors. Bayraktar R, Bertilaccio MTS, Calin GA Frontiers in immunology 31139186 Front Immunol 2019
MicroRNA based theranostics for brain cancer: basic principles. Petrescu GED, Sabo AA, Torsin LI, Calin GA, Dragomir MP Journal of experimental & clinical cancer research : CR 31142339 J Exp Clin Cancer Res 2019 May 29
Exosomal miRNA confers chemo resistance via targeting Cav1/p-gp/M2-type macrophage axis in ovarian cancer. Kanlikilicer P, Bayraktar R, Denizli M, Rashed MH, Ivan C, Aslan B, Mitra R, Karagoz K, Bayraktar E, Zhang X, Rodriguez-Aguayo C, El-Arabey AA, Kahraman N, Baydogan S, Ozkayar O, Gatza ML, Ozpolat B, Calin GA, Sood AK, Lopez-Berestein G EBioMedicine 30487062 EBioMedicine 2018 Dec
Exploring and comparing adverse events between PARP inhibitors. LaFargue CJ, Dal Molin GZ, Sood AK, Coleman RL The Lancet. Oncology 30614472 Lancet Oncol 2019 Jan
Autocrine effects of tumor-derived complement. Cho MS, Vasquez HG, Rupaimoole R, Pradeep S, Wu S, Zand B, Han HD, Rodriguez-Aguayo C, Bottsford-Miller J, Huang J, Miyake T, Choi HJ, Dalton HJ, Ivan C, Baggerly K, Lopez-Berestein G, Sood AK, Afshar-Kharghan V Cell reports 24613353 Cell Rep 2014 Mar 27
Metabolic shifts toward glutamine regulate tumor growth, invasion and bioenergetics in ovarian cancer. Yang L, Moss T, Mangala LS, Marini J, Zhao H, Wahlig S, Armaiz-Pena G, Jiang D, Achreja A, Win J, Roopaimoole R, Rodriguez-Aguayo C, Mercado-Uribe I, Lopez-Berestein G, Liu J, Tsukamoto T, Sood AK, Ram PT, Nagrath D Molecular systems biology 24799285 Mol Syst Biol 2014 May 5
Hematogenous metastasis of ovarian cancer: rethinking mode of spread. Pradeep S, Kim SW, Wu SY, Nishimura M, Chaluvally-Raghavan P, Miyake T, Pecot CV, Kim SJ, Choi HJ, Bischoff FZ, Mayer JA, Huang L, Nick AM, Hall CS, Rodriguez-Aguayo C, Zand B, Dalton HJ, Arumugam T, Lee HJ, Han HD, Cho MS, Rupaimoole R, Mangala LS, Sehgal V, Oh SC, Liu J, Lee JS, Coleman RL, Ram P, Lopez-Berestein G, Fidler IJ, Sood AK Cancer cell 25026212 Cancer Cell 2014 Jul 14
RNAi therapies: drugging the undruggable. Wu SY, Lopez-Berestein G, Calin GA, Sood AK Science translational medicine 24920658 Sci Transl Med 2014 Jun 11
MicroRNAs and ceRNAs: therapeutic implications of RNA networks. Giza DE, Vasilescu C, Calin GA Expert opinion on biological therapy 24941322 Expert Opin Biol Ther 2014 Sep
Nanotechnology in cancer therapy. Aslan B, Ozpolat B, Sood AK, Lopez-Berestein G Journal of drug targeting 24079419 J Drug Target 2013 Dec
Tumour angiogenesis regulation by the miR-200 family. Pecot CV, Rupaimoole R, Yang D, Akbani R, Ivan C, Lu C, Wu S, Han HD, Shah MY, Rodriguez-Aguayo C, Bottsford-Miller J, Liu Y, Kim SB, Unruh A, Gonzalez-Villasana V, Huang L, Zand B, Moreno-Smith M, Mangala LS, Taylor M, Dalton HJ, Sehgal V, Wen Y, Kang Y, Baggerly KA, Lee JS, Ram PT, Ravoori MK, Kundra V, Zhang X, Ali-Fehmi R, Gonzalez-Angulo AM, Massion PP, Calin GA, Lopez-Berestein G, Zhang W, Sood AK Nature communications 24018975 Nat Commun 2013
Examining plasma microRNA markers for colorectal cancer at different stages. Sun Y, Liu Y, Cogdell D, Calin GA, Sun B, Kopetz S, Hamilton SR, Zhang W Oncotarget 26863633 Oncotarget 2016 Mar 8
Venous thromboembolism, interleukin-6 and survival outcomes in patients with advanced ovarian clear cell carcinoma. Matsuo K, Hasegawa K, Yoshino K, Murakami R, Hisamatsu T, Stone RL, Previs RA, Hansen JM, Ikeda Y, Miyara A, Hiramatsu K, Enomoto T, Fujiwara K, Matsumura N, Konishi I, Roman LD, Gabra H, Fotopoulou C, Sood AK European journal of cancer (Oxford, England : 1990) 26238017 Eur J Cancer 2015 Sep
The ZNF304-integrin axis protects against anoikis in cancer. Aslan B, Monroig P, Hsu MC, Pena GA, Rodriguez-Aguayo C, Gonzalez-Villasana V, Rupaimoole R, Nagaraja AS, Mangala S, Han HD, Yuca E, Wu SY, Ivan C, Moss TJ, Ram PT, Wang H, Gol-Chambers A, Ozkayar O, Kanlikilicer P, Fuentes-Mattei E, Kahraman N, Pradeep S, Ozpolat B, Tucker S, Hung MC, Baggerly K, Bartholomeusz G, Calin G, Sood AK, Lopez-Berestein G Nature communications 26081979 Nat Commun 2015 Jun 17
Low spinophilin expression enhances aggressive biological behavior of breast cancer. Schwarzenbacher D, Stiegelbauer V, Deutsch A, Ress AL, Aigelsreiter A, Schauer S, Wagner K, Langsenlehner T, Resel M, Gerger A, Ling H, Ivan C, Calin GA, Hoefler G, Rinner B, Pichler M Oncotarget 25857299 Oncotarget 2015 May 10
A framework for a personalized surgical approach to ovarian cancer. Nick AM, Coleman RL, Ramirez PT, Sood AK Nature reviews. Clinical oncology 25707631 Nat Rev Clin Oncol 2015 Apr
The miR-143/miR-145 cluster and the tumor microenvironment: unexpected roles. Almeida MI, Calin GA Genome medicine 26988859 Genome Med 2016 Mar 17
RNA interference-based therapy and its delivery systems. Chen X, Mangala LS, Rodriguez-Aguayo C, Kong X, Lopez-Berestein G, Sood AK Cancer metastasis reviews 29243000 Cancer Metastasis Rev 2018 Mar
The Effect of Topoisomerase I Inhibitors on the Efficacy of T-Cell-Based Cancer Immunotherapy. McKenzie JA, Mbofung RM, Malu S, Zhang M, Ashkin E, Devi S, Williams L, Tieu T, Peng W, Pradeep S, Xu C, Zorro Manrique S, Liu C, Huang L, Chen Y, Forget MA, Haymaker C, Bernatchez C, Satani N, Muller F, Roszik J, Kalra A, Heffernan T, Sood A, Hu J, Amaria R, Davis RE, Hwu P Journal of the National Cancer Institute 29267866 J Natl Cancer Inst 2018 Jul 1
MYC Targeted Long Noncoding RNA DANCR Promotes Cancer in Part by Reducing p21 Levels. Lu Y, Hu Z, Mangala LS, Stine ZE, Hu X, Jiang D, Xiang Y, Zhang Y, Pradeep S, Rodriguez-Aguayo C, Lopez-Berestein G, DeMarzo AM, Sood AK, Zhang L, Dang CV Cancer research 29180471 Cancer Res 2018 Jan 1
miR-509-3p is clinically significant and strongly attenuates cellular migration and multi-cellular spheroids in ovarian cancer. Pan Y, Robertson G, Pedersen L, Lim E, Hernandez-Herrera A, Rowat AC, Patil SL, Chan CK, Wen Y, Zhang X, Basu-Roy U, Mansukhani A, Chu A, Sipahimalani P, Bowlby R, Brooks D, Thiessen N, Coarfa C, Ma Y, Moore RA, Schein JE, Mungall AJ, Liu J, Pecot CV, Sood AK, Jones SJ, Marra MA, Gunaratne PH Oncotarget 27036018 Oncotarget 2016 May 3
Small RNA Sequencing across Diverse Biofluids Identifies Optimal Methods for exRNA Isolation. Srinivasan S, Yeri A, Cheah PS, Chung A, Danielson K, De Hoff P, Filant J, Laurent CD, Laurent LD, Magee R, Moeller C, Murthy VL, Nejad P, Paul A, Rigoutsos I, Rodosthenous R, Shah RV, Simonson B, To C, Wong D, Yan IK, Zhang X, Balaj L, Breakefield XO, Daaboul G, Gandhi R, Lapidus J, Londin E, Patel T, Raffai RL, Sood AK, Alexander RP, Das S, Laurent LC Cell 30951671 Cell 2019 Apr 4
JAM-ming miR-21. Mohapatra S, Calin G Cell death and differentiation 34226679 Cell Death Differ 2021 Oct
Loss of p53 drives neuron reprogramming in head and neck cancer. Amit M, Takahashi H, Dragomir MP, Lindemann A, Gleber-Netto FO, Pickering CR, Anfossi S, Osman AA, Cai Y, Wang R, Knutsen E, Shimizu M, Ivan C, Rao X, Wang J, Silverman DA, Tam S, Zhao M, Caulin C, Zinger A, Tasciotti E, Dougherty PM, El-Naggar A, Calin GA, Myers JN Nature 32051587 Nature 2020 Feb
MicroRNAs from Liquid Biopsy Derived Extracellular Vesicles: Recent Advances in Detection and Characterization Methods. Drula R, Ott LF, Berindan-Neagoe I, Pantel K, Calin GA Cancers 32707943 Cancers (Basel) 2020 Jul 22
GATA3 as a master regulator for interactions of tumor-associated macrophages with high-grade serous ovarian carcinoma. El-Arabey AA, Denizli M, Kanlikilicer P, Bayraktar R, Ivan C, Rashed M, Kabil N, Ozpolat B, Calin GA, Salama SA, Abd-Allah AR, Sood AK, Lopez-Berestein G Cellular signalling 31935430 Cell Signal 2020 Apr
The non-coding RNome after splenectomy. Dragomir MP, Tudor S, Okubo K, Shimizu M, Chen M, Giza DE, He WR, Ivan C, Calin GA, Vasilescu C Journal of cellular and molecular medicine 31496026 J Cell Mol Med 2019 Nov
A New World of Biomarkers and Therapeutics for Female Reproductive System and Breast Cancers: Circular RNAs. Tran AM, Chalbatani GM, Berland L, Cruz De Los Santos M, Raj P, Jalali SA, Gharagouzloo E, Ivan C, Dragomir MP, Calin GA Frontiers in cell and developmental biology 32211400 Front Cell Dev Biol 2020
miRNA551b-3p Activates an Oncostatin Signaling Module for the Progression of Triple-Negative Breast Cancer. Parashar D, Geethadevi A, Aure MR, Mishra J, George J, Chen C, Mishra MK, Tahiri A, Zhao W, Nair B, Lu Y, Mangala LS, Rodriguez-Aguayo C, Lopez-Berestein G, Camara AKS, Liang M, Rader JS, Ramchandran R, You M, Sood AK, Kristensen VN, Mills GB, Pradeep S, Chaluvally-Raghavan P Cell reports 31875548 Cell Rep 2019 Dec 24
A Holistic Perspective: Exosomes Shuttle between Nerves and Immune Cells in the Tumor Microenvironment. Dragomir MP, Moisoiu V, Manaila R, Pardini B, Knutsen E, Anfossi S, Amit M, Calin GA Journal of clinical medicine 33142779 J Clin Med 2020 Oct 31
Cancer-Associated Neurogenesis and Nerve-Cancer Cross-talk. Silverman DA, Martinez VK, Dougherty PM, Myers JN, Calin GA, Amit M Cancer research 33334813 Cancer Res 2021 Mar 15
Classic and targeted anti-leukaemic agents interfere with the cholesterol biogenesis metagene in acute myeloid leukaemia: Therapeutic implications. Chen F, Wu X, Niculite C, Gilca M, Petrusca D, Rogozea A, Rice S, Guo B, Griffin S, Calin GA, Boswell HS, Konig H Journal of cellular and molecular medicine 32450611 J Cell Mol Med 2020 Jul
Calcium-dependent FAK/CREB/TNNC1 signalling mediates the effect of stromal MFAP5 on ovarian cancer metastatic potential. Leung CS, Yeung TL, Yip KP, Pradeep S, Balasubramanian L, Liu J, Wong KK, Mangala LS, Armaiz-Pena GN, Lopez-Berestein G, Sood AK, Birrer MJ, Mok SC Nature communications 25277212 Nat Commun 2014 Oct 3
Hypoxia-mediated downregulation of miRNA biogenesis promotes tumour progression. Rupaimoole R, Wu SY, Pradeep S, Ivan C, Pecot CV, Gharpure KM, Nagaraja AS, Armaiz-Pena GN, McGuire M, Zand B, Dalton HJ, Filant J, Miller JB, Lu C, Sadaoui NC, Mangala LS, Taylor M, van den Beucken T, Koch E, Rodriguez-Aguayo C, Huang L, Bar-Eli M, Wouters BG, Radovich M, Ivan M, Calin GA, Zhang W, Lopez-Berestein G, Sood AK Nature communications 25351346 Nat Commun 2014 Oct 29
Molecular pathways: translational and therapeutic implications of the Notch signaling pathway in cancer. Previs RA, Coleman RL, Harris AL, Sood AK Clinical cancer research : an official journal of the American Association for Cancer Research 25388163 Clin Cancer Res 2015 Mar 1
New ways to successfully target tumor vasculature in ovarian cancer. Yang X, Shen F, Hu W, Coleman RL, Sood AK Current opinion in obstetrics & gynecology 25502429 Curr Opin Obstet Gynecol 2015 Feb
Anti-vascular therapies in ovarian cancer: moving beyond anti-VEGF approaches. Choi HJ, Armaiz Pena GN, Pradeep S, Cho MS, Coleman RL, Sood AK Cancer metastasis reviews 25544368 Cancer Metastasis Rev 2015 Mar
Small molecule compounds targeting miRNAs for cancer therapy. Monroig Pdel C, Chen L, Zhang S, Calin GA Advanced drug delivery reviews 25239236 Adv Drug Deliv Rev 2015 Jan
Platelet effects on ovarian cancer. Davis AN, Afshar-Kharghan V, Sood AK Seminars in oncology 25023353 Semin Oncol 2014 Jun
Long noncoding RNA in neuroblastoma: new light on the (old) N-Myc story. Pichler M, Calin GA Journal of the National Cancer Institute 24906400 J Natl Cancer Inst 2014 Jul
MicroRNAome genome: a treasure for cancer diagnosis and therapy. Berindan-Neagoe I, Monroig Pdel C, Pasculli B, Calin GA CA: a cancer journal for clinicians 25104502 CA Cancer J Clin 2014 Sep-Oct
The merits of vascular targeting for gynecologic malignancies. Kamat AA, Sood AK Current oncology reports 16221381 Curr Oncol Rep 2005 Nov
A biobehavioral perspective of tumor biology. McDonald PG, Antoni MH, Lutgendorf SK, Cole SW, Dhabhar FS, Sephton SE, Stefanek M, Sood AK Discovery medicine 20704834 Discov Med 2005 Dec
Impact of vessel maturation on antiangiogenic therapy in ovarian cancer. Lu C, Thaker PH, Lin YG, Spannuth W, Landen CN, Merritt WM, Jennings NB, Langley RR, Gershenson DM, Yancopoulos GD, Ellis LM, Jaffe RB, Coleman RL, Sood AK American journal of obstetrics and gynecology 18395047 Am J Obstet Gynecol 2008 Apr
Sustained adrenergic signaling leads to increased metastasis in ovarian cancer via increased PGE2 synthesis. Nagaraja AS, Dorniak PL, Sadaoui NC, Kang Y, Lin T, Armaiz-Pena G, Wu SY, Rupaimoole R, Allen JK, Gharpure KM, Pradeep S, Zand B, Previs RA, Hansen JM, Ivan C, Rodriguez-Aguayo C, Yang P, Lopez-Berestein G, Lutgendorf SK, Cole SW, Sood AK Oncogene 26257064 Oncogene 2016 May 5
Tracking miRNAs' footprints in tumor-microenvironment interactions: Insights and implications for targeted cancer therapy. Nouraee N, Mowla SJ, Calin GA Genes, chromosomes & cancer 25832733 Genes Chromosomes Cancer 2015 Jun
From the Biology of PP2A to the PADs for Therapy of Hematologic Malignancies. Ciccone M, Calin GA, Perrotti D Frontiers in oncology 25763353 Front Oncol 2015
Targeting c-MYC in Platinum-Resistant Ovarian Cancer. Reyes-González JM, Armaiz-Peña GN, Mangala LS, Valiyeva F, Ivan C, Pradeep S, Echevarría-Vargas IM, Rivera-Reyes A, Sood AK, Vivas-Mejía PE Molecular cancer therapeutics 26227489 Mol Cancer Ther 2015 Oct
Epstein-Barr Virus MicroRNAs are Expressed in Patients with Chronic Lymphocytic Leukemia and Correlate with Overall Survival. Ferrajoli A, Ivan C, Ciccone M, Shimizu M, Kita Y, Ohtsuka M, D'Abundo L, Qiang J, Lerner S, Nouraee N, Rabe KG, Rassenti LZ, Van Roosbroeck K, Manning JT, Yuan Y, Zhang X, Shanafelt TD, Wierda WG, Sabbioni S, Tarrand JJ, Estrov Z, Radovich M, Liang H, Negrini M, Kipps TJ, Kay NE, Keating M, Calin GA EBioMedicine 26288818 EBioMedicine 2015 Jun
The Clinical Relevance of Long Non-Coding RNAs in Cancer. Silva A, Bullock M, Calin G Cancers 26516918 Cancers (Basel) 2015 Oct 27
Notch3 pathway alterations in ovarian cancer. Hu W, Liu T, Ivan C, Sun Y, Huang J, Mangala LS, Miyake T, Dalton HJ, Pradeep S, Rupaimoole R, Previs RA, Han HD, Bottsford-Miller J, Zand B, Kang Y, Pecot CV, Nick AM, Wu SY, Lee JS, Sehgal V, Ram P, Liu J, Tucker SL, Lopez-Berestein G, Baggerly KA, Coleman RL, Sood AK Cancer research 24743243 Cancer Res 2014 Jun 15
Mechanisms of nuclear content loading to exosomes. Yokoi A, Villar-Prados A, Oliphint PA, Zhang J, Song X, De Hoff P, Morey R, Liu J, Roszik J, Clise-Dwyer K, Burks JK, O'Halloran TJ, Laurent LC, Sood AK Science advances 31799396 Sci Adv 2019 Nov
CRISPR-based RNA editing: diagnostic applications and therapeutic options. Gulei D, Raduly L, Berindan-Neagoe I, Calin GA Expert review of molecular diagnostics 30632384 Expert Rev Mol Diagn 2019 Feb
Circulating inflammation signature predicts overall survival and relapse-free survival in metastatic colorectal cancer. Varkaris A, Katsiampoura A, Davis JS, Shah N, Lam M, Frias RL, Ivan C, Shimizu M, Morris J, Menter D, Overman M, Tran H, Heymach J, Chun YS, Vauthey JN, Calin G, Kopetz S British journal of cancer 30636774 Br J Cancer 2019 Feb
To Wnt or Lose: The Missing Non-Coding Linc in Colorectal Cancer. Shen P, Pichler M, Chen M, Calin GA, Ling H International journal of molecular sciences 28930145 Int J Mol Sci 2017 Sep 20
Transcribed ultraconserved region 339 promotes carcinogenesis by modulating tumor suppressor microRNAs. Vannini I, Wise PM, Challagundla KB, Plousiou M, Raffini M, Bandini E, Fanini F, Paliaga G, Crawford M, Ferracin M, Ivan C, Fabris L, Davuluri RV, Guo Z, Cortez MA, Zhang X, Chen L, Zhang S, Fernandez-Cymering C, Han L, Carloni S, Salvi S, Ling H, Murtadha M, Neviani P, Gitlitz BJ, Laird-Offringa IA, Nana-Sinkam P, Negrini M, Liang H, Amadori D, Cimmino A, Calin GA, Fabbri M Nature communications 29180617 Nat Commun 2017 Nov 27
Exploitation of Exosomes as Nanocarriers for Gene-, Chemo-, and Immune-Therapy of Cancer. Srivastava A, Babu A, Filant J, Moxley KM, Ruskin R, Dhanasekaran D, Sood AK, McMeekin S, Ramesh R Journal of biomedical nanotechnology 27319211 J Biomed Nanotechnol 2016 Jun
Exosomal lncRNAs as new players in cell-to-cell communication. Dragomir M, Chen B, Calin GA Translational cancer research 30148073 Transl Cancer Res 2018 Mar
A total transcriptome profiling method for plasma-derived extracellular vesicles: applications for liquid biopsies. Amorim MG, Valieris R, Drummond RD, Pizzi MP, Freitas VM, Sinigaglia-Coimbra R, Calin GA, Pasqualini R, Arap W, Silva IT, Dias-Neto E, Nunes DN Scientific reports 29089558 Sci Rep 2017 Oct 31
Cell-to-cell communication: microRNAs as hormones. Bayraktar R, Van Roosbroeck K, Calin GA Molecular oncology 29024380 Mol Oncol 2017 Dec
The Platelet Lifeline to Cancer: Challenges and Opportunities. Haemmerle M, Stone RL, Menter DG, Afshar-Kharghan V, Sood AK Cancer cell 29657130 Cancer Cell 2018 Jun 11
Systematic Identification of Druggable Epithelial-Stromal Crosstalk Signaling Networks in Ovarian Cancer. Yeung TL, Sheng J, Leung CS, Li F, Kim J, Ho SY, Matzuk MM, Lu KH, Wong STC, Mok SC Journal of the National Cancer Institute 29860390 J Natl Cancer Inst 2019 Mar 1
Immune cell profiling in cancer: molecular approaches to cell-specific identification. Lyons YA, Wu SY, Overwijk WW, Baggerly KA, Sood AK NPJ precision oncology 29872708 NPJ Precis Oncol 2017
Long non-coding RNA containing ultraconserved genomic region 8 promotes bladder cancer tumorigenesis. Olivieri M, Ferro M, Terreri S, Durso M, Romanelli A, Avitabile C, De Cobelli O, Messere A, Bruzzese D, Vannini I, Marinelli L, Novellino E, Zhang W, Incoronato M, Ilardi G, Staibano S, Marra L, Franco R, Perdonà S, Terracciano D, Czerniak B, Liguori GL, Colonna V, Fabbri M, Febbraio F, Calin GA, Cimmino A Oncotarget 26943042 Oncotarget 2016 Apr 12
MicroRNAs in chronic lymphocytic leukemia: miRacle or miRage for prognosis and targeted therapies? Van Roosbroeck K, Calin GA Seminars in oncology 27040698 Semin Oncol 2016 Apr
FAK regulates platelet extravasation and tumor growth after antiangiogenic therapy withdrawal. Haemmerle M, Bottsford-Miller J, Pradeep S, Taylor ML, Choi HJ, Hansen JM, Dalton HJ, Stone RL, Cho MS, Nick AM, Nagaraja AS, Gutschner T, Gharpure KM, Mangala LS, Rupaimoole R, Han HD, Zand B, Armaiz-Pena GN, Wu SY, Pecot CV, Burns AR, Lopez-Berestein G, Afshar-Kharghan V, Sood AK The Journal of clinical investigation 27064283 J Clin Invest 2016 May 2
Role of Increased n-acetylaspartate Levels in Cancer. Zand B, Previs RA, Zacharias NM, Rupaimoole R, Mitamura T, Nagaraja AS, Guindani M, Dalton HJ, Yang L, Baddour J, Achreja A, Hu W, Pecot CV, Ivan C, Wu SY, McCullough CR, Gharpure KM, Shoshan E, Pradeep S, Mangala LS, Rodriguez-Aguayo C, Wang Y, Nick AM, Davies MA, Armaiz-Pena G, Liu J, Lutgendorf SK, Baggerly KA, Eli MB, Lopez-Berestein G, Nagrath D, Bhattacharya PK, Sood AK Journal of the National Cancer Institute 26819345 J Natl Cancer Inst 2016 Jan 26
microRNA and Chronic Lymphocytic Leukemia. Giza DE, Calin GA Advances in experimental medicine and biology 26658994 Adv Exp Med Biol 2015
N-BLR, a primate-specific non-coding transcript leads to colorectal cancer invasion and migration. Rigoutsos I, Lee SK, Nam SY, Anfossi S, Pasculli B, Pichler M, Jing Y, Rodriguez-Aguayo C, Telonis AG, Rossi S, Ivan C, Catela Ivkovic T, Fabris L, Clark PM, Ling H, Shimizu M, Redis RS, Shah MY, Zhang X, Okugawa Y, Jung EJ, Tsirigos A, Huang L, Ferdin J, Gafà R, Spizzo R, Nicoloso MS, Paranjape AN, Shariati M, Tiron A, Yeh JJ, Teruel-Montoya R, Xiao L, Melo SA, Menter D, Jiang ZQ, Flores ER, Negrini M, Goel A, Bar-Eli M, Mani SA, Liu CG, Lopez-Berestein G, Berindan-Neagoe I, Esteller M, Kopetz S, Lanza G, Calin GA Genome biology 28535802 Genome Biol 2017 May 24
A-to-I miR-378a-3p editing can prevent melanoma progression via regulation of PARVA expression. Velazquez-Torres G, Shoshan E, Ivan C, Huang L, Fuentes-Mattei E, Paret H, Kim SJ, Rodriguez-Aguayo C, Xie V, Brooks D, Jones SJM, Robertson AG, Calin G, Lopez-Berenstein G, Sood A, Bar-Eli M Nature communications 29386624 Nat Commun 2018 Jan 31
Delivery of negatively charged liposomes into the atherosclerotic plaque of apolipoprotein E-deficient mouse aortic tissue. Zhaorigetu S, Rodriguez-Aguayo C, Sood AK, Lopez-Berestein G, Walton BL Journal of liposome research 24443972 J Liposome Res 2014 Sep
Therapeutic potential of FLANC, a novel primate-specific long non-coding RNA in colorectal cancer. Pichler M, Rodriguez-Aguayo C, Nam SY, Dragomir MP, Bayraktar R, Anfossi S, Knutsen E, Ivan C, Fuentes-Mattei E, Lee SK, Ling H, Catela Ivkovic T, Huang G, Huang L, Okugawa Y, Katayama H, Taguchi A, Bayraktar E, Bhattacharya R, Amero P, He WR, Tran AM, Vychytilova-Faltejskova P, Klec C, Bonilla DL, Zhang X, Kapitanovic S, Loncar B, Gafà R, Wang Z, Cristini V, Hanash SM, Bar-Eli M, Lanza G, Slaby O, Goel A, Rigoutsos I, Lopez-Berestein G, Calin GA Gut 31988194 Gut 2020 Oct
Noncoding RNA therapeutics - challenges and potential solutions. Winkle M, El-Daly SM, Fabbri M, Calin GA Nature reviews. Drug discovery 34145432 Nat Rev Drug Discov 2021 Aug
Targeting non-coding RNAs to overcome cancer therapy resistance. Chen B, Dragomir MP, Yang C, Li Q, Horst D, Calin GA Signal transduction and targeted therapy 35418578 Signal Transduct Target Ther 2022 Apr 13
SIK2 inhibition enhances PARP inhibitor activity synergistically in ovarian and triple-negative breast cancers. Lu Z, Mao W, Yang H, Santiago-O'Farrill JM, Rask PJ, Mondal J, Chen H, Ivan C, Liu X, Liu CG, Xi Y, Masuda K, Carrami EM, Chen M, Tang Y, Pang L, Lakomy DS, Calin GA, Liang H, Ahmed AA, Vankayalapati H, Bast RC Jr The Journal of clinical investigation 35642638 J Clin Invest 2022 Jun 1
FuncPEP: A Database of Functional Peptides Encoded by Non-Coding RNAs. Dragomir MP, Manyam GC, Ott LF, Berland L, Knutsen E, Ivan C, Lipovich L, Broom BM, Calin GA Non-coding RNA 32977531 Noncoding RNA 2020 Sep 23
Analysis of the circRNA and T-UCR populations identifies convergent pathways in mouse and human models of Rett syndrome. Siqueira E, Obiols-Guardia A, Jorge-Torres OC, Oliveira-Mateos C, Soler M, Ramesh-Kumar D, Setién F, van Rossum D, Pascual-Alonso A, Xiol C, Ivan C, Shimizu M, Armstrong J, Calin GA, Pasterkamp RJ, Esteller M, Guil S Molecular therapy. Nucleic acids 35036070 Mol Ther Nucleic Acids 2022 Mar 8
Targeting Stromal Glutamine Synthetase in Tumors Disrupts Tumor Microenvironment-Regulated Cancer Cell Growth. Yang L, Achreja A, Yeung TL, Mangala LS, Jiang D, Han C, Baddour J, Marini JC, Ni J, Nakahara R, Wahlig S, Chiba L, Kim SH, Morse J, Pradeep S, Nagaraja AS, Haemmerle M, Kyunghee N, Derichsweiler M, Plackemeier T, Mercado-Uribe I, Lopez-Berestein G, Moss T, Ram PT, Liu J, Lu X, Mok SC, Sood AK, Nagrath D Cell metabolism 27829138 Cell Metab 2016 Nov 8
Improving vascular maturation using noncoding RNAs increases antitumor effect of chemotherapy. Mangala LS, Wang H, Jiang D, Wu SY, Somasunderam A, Volk DE, Lokesh GLR, Li X, Pradeep S, Yang X, Haemmerle M, Rodriguez-Aguayo C, Nagaraja AS, Rupaimoole R, Bayraktar E, Bayraktar R, Li L, Tanaka T, Hu W, Ivan C, Gharpure KM, McGuire MH, Thiviyanathan V, Zhang X, Maiti SN, Bulayeva N, Choi HJ, Dorniak PL, Cooper LJ, Rosenblatt KP, Lopez-Berestein G, Gorenstein DG, Sood AK JCI insight 27777972 JCI Insight 2016 Oct 20
Role of CTGF in Sensitivity to Hyperthermia in Ovarian and Uterine Cancers. Hatakeyama H, Wu SY, Lyons YA, Pradeep S, Wang W, Huang Q, Court KA, Liu T, Nie S, Rodriguez-Aguayo C, Shen F, Huang Y, Hisamatsu T, Mitamura T, Jennings N, Shim J, Dorniak PL, Mangala LS, Petrillo M, Petyuk VA, Schepmoes AA, Shukla AK, Torres-Lugo M, Lee JS, Rodland KD, Fagotti A, Lopez-Berestein G, Li C, Sood AK Cell reports 27806300 Cell Rep 2016 Nov 1
RNA nanoparticles harboring annexin A2 aptamer can target ovarian cancer for tumor-specific doxorubicin delivery. Pi F, Zhang H, Li H, Thiviyanathan V, Gorenstein DG, Sood AK, Guo P Nanomedicine : nanotechnology, biology, and medicine 27890659 Nanomedicine 2017 Apr
Salt-Inducible Kinase 2 Couples Ovarian Cancer Cell Metabolism with Survival at the Adipocyte-Rich Metastatic Niche. Miranda F, Mannion D, Liu S, Zheng Y, Mangala LS, Redondo C, Herrero-Gonzalez S, Xu R, Taylor C, Chedom DF, Carrami EM, Albukhari A, Jiang D, Pradeep S, Rodriguez-Aguayo C, Lopez-Berestein G, Salah E, Abdul Azeez KR, Elkins JM, Campo L, Myers KA, Klotz D, Bivona S, Dhar S, Bast RC Jr, Saya H, Choi HG, Gray NS, Fischer R, Kessler BM, Yau C, Sood AK, Motohara T, Knapp S, Ahmed AA Cancer cell 27478041 Cancer Cell 2016 Aug 8
Lipid Osteoclastokines Regulate Breast Cancer Bone Metastasis. Krzeszinski JY, Schwaid AG, Cheng WY, Jin Z, Gallegos ZR, Saghatelian A, Wan Y Endocrinology 27967239 Endocrinology 2017 Mar 1
lncRNA and Mechanisms of Drug Resistance in Cancers of the Genitourinary System. Barth DA, Juracek J, Slaby O, Pichler M, Calin GA Cancers 32756406 Cancers (Basel) 2020 Aug 3
Gain-of-function p53 protein transferred via small extracellular vesicles promotes conversion of fibroblasts to a cancer-associated phenotype. Ma S, McGuire MH, Mangala LS, Lee S, Stur E, Hu W, Bayraktar E, Villar-Prados A, Ivan C, Wu SY, Yokoi A, Dasari SK, Jennings NB, Liu J, Lopez-Berestein G, Ram P, Sood AK Cell reports 33567287 Cell Rep 2021 Feb 9
PTGER3 induces ovary tumorigenesis and confers resistance to cisplatin therapy through up-regulation Ras-MAPK/Erk-ETS1-ELK1/CFTR1 axis. Rodriguez-Aguayo C, Bayraktar E, Ivan C, Aslan B, Mai J, He G, Mangala LS, Jiang D, Nagaraja AS, Ozpolat B, Chavez-Reyes A, Ferrari M, Mitra R, Siddik ZH, Shen H, Yang X, Sood AK, Lopez-Berestein G EBioMedicine 30655206 EBioMedicine 2019 Feb
Stress, inflammation, and eicosanoids: an emerging perspective. Umamaheswaran S, Dasari SK, Yang P, Lutgendorf SK, Sood AK Cancer metastasis reviews 29948328 Cancer Metastasis Rev 2018 Sep
Cancer-associated rs6983267 SNP and its accompanying long noncoding RNA CCAT2 induce myeloid malignancies via unique SNP-specific RNA mutations. Shah MY, Ferracin M, Pileczki V, Chen B, Redis R, Fabris L, Zhang X, Ivan C, Shimizu M, Rodriguez-Aguayo C, Dragomir M, Van Roosbroeck K, Almeida MI, Ciccone M, Nedelcu D, Cortez MA, Manshouri T, Calin S, Muftuoglu M, Banerjee PP, Badiwi MH, Parker-Thornburg J, Multani A, Welsh JW, Estecio MR, Ling H, Tomuleasa C, Dima D, Yang H, Alvarez H, You MJ, Radovich M, Shpall E, Fabbri M, Rezvani K, Girnita L, Berindan-Neagoe I, Maitra A, Verstovsek S, Fodde R, Bueso-Ramos C, Gagea M, Manero GG, Calin GA Genome research 29567676 Genome Res 2018 Apr
Identifying and targeting angiogenesis-related microRNAs in ovarian cancer. Chen X, Mangala LS, Mooberry L, Bayraktar E, Dasari SK, Ma S, Ivan C, Court KA, Rodriguez-Aguayo C, Bayraktar R, Raut S, Sabnis N, Kong X, Yang X, Lopez-Berestein G, Lacko AG, Sood AK Oncogene 31289363 Oncogene 2019 Aug
Competing Engagement of β-arrestin Isoforms Balances IGF1R/p53 Signaling and Controls Melanoma Cell Chemotherapeutic Responsiveness. Cismas S, Pasca S, Crudden C, Trocoli Drakensjo I, Suleymanova N, Zhang S, Gebhard B, Song D, Neo S, Shibano T, Smith TJ, Calin GA, Girnita A, Girnita L Molecular cancer research : MCR 37584671 Mol Cancer Res 2023 Dec 1
Inflammation induced by tumor-associated nerves promotes resistance to anti-PD-1 therapy in cancer patients and is targetable by interleukin-6 blockade. Baruch EN, Nagarajan P, Gleber-Netto FO, Rao X, Xie T, Akhter S, Adewale A, Shajedul I, Mattson BJ, Ferrarotto R, Wong MK, Davies MA, Jindal S, Basu S, Harwood C, Leigh I, Ajami N, Futreal A, Castillo M, Gunaratne P, Goepfert RP, Khushalani N, Wang J, Watowich S, Calin GA, Migden MR, Vermeer P, D'Silva N, Yaniv D, Burks JK, Gomez J, Dougherty PM, Tsai KY, Allison JP, Sharma P, Wargo J, Myers JN, Gross ND, Amit M Research square 37503252 Res Sq 2023 Jul 18
Focal adhesion kinase silencing augments docetaxel-mediated apoptosis in ovarian cancer cells. Halder J, Landen CN Jr, Lutgendorf SK, Li Y, Jennings NB, Fan D, Nelkin GM, Schmandt R, Schaller MD, Sood AK Clinical cancer research : an official journal of the American Association for Cancer Research 16361572 Clin Cancer Res 2005 Dec 15
Molecular biomarkers of residual disease after surgical debulking of high-grade serous ovarian cancer. Tucker SL, Gharpure K, Herbrich SM, Unruh AK, Nick AM, Crane EK, Coleman RL, Guenthoer J, Dalton HJ, Wu SY, Rupaimoole R, Lopez-Berestein G, Ozpolat B, Ivan C, Hu W, Baggerly KA, Sood AK Clinical cancer research : an official journal of the American Association for Cancer Research 24756370 Clin Cancer Res 2014 Jun 15
Antagonism of tumoral prolactin receptor promotes autophagy-related cell death. Wen Y, Zand B, Ozpolat B, Szczepanski MJ, Lu C, Yuca E, Carroll AR, Alpay N, Bartholomeusz C, Tekedereli I, Kang Y, Rupaimoole R, Pecot CV, Dalton HJ, Hernandez A, Lokshin A, Lutgendorf SK, Liu J, Hittelman WN, Chen WY, Lopez-Berestein G, Szajnik M, Ueno NT, Coleman RL, Sood AK Cell reports 24703838 Cell Rep 2014 Apr 24
The RNA-binding protein DDX1 promotes primary microRNA maturation and inhibits ovarian tumor progression. Han C, Liu Y, Wan G, Choi HJ, Zhao L, Ivan C, He X, Sood AK, Zhang X, Lu X Cell reports 25176654 Cell Rep 2014 Sep 11
The clinical relevance of stromal matrix metalloproteinase expression in ovarian cancer. Kamat AA, Fletcher M, Gruman LM, Mueller P, Lopez A, Landen CN Jr, Han L, Gershenson DM, Sood AK Clinical cancer research : an official journal of the American Association for Cancer Research 16551853 Clin Cancer Res 2006 Mar 15
Therapeutic synergy between microRNA and siRNA in ovarian cancer treatment. Nishimura M, Jung EJ, Shah MY, Lu C, Spizzo R, Shimizu M, Han HD, Ivan C, Rossi S, Zhang X, Nicoloso MS, Wu SY, Almeida MI, Bottsford-Miller J, Pecot CV, Zand B, Matsuo K, Shahzad MM, Jennings NB, Rodriguez-Aguayo C, Lopez-Berestein G, Sood AK, Calin GA Cancer discovery 24002999 Cancer Discov 2013 Nov
Clinical relevance of circulating cell-free microRNAs in cancer. Schwarzenbach H, Nishida N, Calin GA, Pantel K Nature reviews. Clinical oncology 24492836 Nat Rev Clin Oncol 2014 Mar
Monocyte subpopulations in angiogenesis. Dalton HJ, Armaiz-Pena GN, Gonzalez-Villasana V, Lopez-Berestein G, Bar-Eli M, Sood AK Cancer research 24556724 Cancer Res 2014 Mar 1
microRNA Therapeutics in Cancer - An Emerging Concept. Shah MY, Ferrajoli A, Sood AK, Lopez-Berestein G, Calin GA EBioMedicine 27720213 EBioMedicine 2016 Oct
Targeting KRas-dependent tumour growth, circulating tumour cells and metastasis in vivo by clinically significant miR-193a-3p. Seviour EG, Sehgal V, Mishra D, Rupaimoole R, Rodriguez-Aguayo C, Lopez-Berestein G, Lee JS, Sood AK, Kim MP, Mills GB, Ram PT Oncogene 27669434 Oncogene 2017 Mar
Progresses towards safe and efficient gene therapy vectors. Chira S, Jackson CS, Oprea I, Ozturk F, Pepper MS, Diaconu I, Braicu C, Raduly LZ, Calin GA, Berindan-Neagoe I Oncotarget 26362400 Oncotarget 2015 Oct 13
H19 Noncoding RNA, an Independent Prognostic Factor, Regulates Essential Rb-E2F and CDK8-β-Catenin Signaling in Colorectal Cancer. Ohtsuka M, Ling H, Ivan C, Pichler M, Matsushita D, Goblirsch M, Stiegelbauer V, Shigeyasu K, Zhang X, Chen M, Vidhu F, Bartholomeusz GA, Toiyama Y, Kusunoki M, Doki Y, Mori M, Song S, Gunther JR, Krishnan S, Slaby O, Goel A, Ajani JA, Radovich M, Calin GA EBioMedicine 27789274 EBioMedicine 2016 Nov
HIF1A gene polymorphisms and human diseases: Graphical review of 97 association studies. Gladek I, Ferdin J, Horvat S, Calin GA, Kunej T Genes, chromosomes & cancer 28165644 Genes Chromosomes Cancer 2017 Jun
MicroRNAs in Myeloid Hematological Malignancies. Ciccone M, Calin GA Current genomics 27047254 Curr Genomics 2015 Oct
A miR-192-EGR1-HOXB9 regulatory network controls the angiogenic switch in cancer. Wu SY, Rupaimoole R, Shen F, Pradeep S, Pecot CV, Ivan C, Nagaraja AS, Gharpure KM, Pham E, Hatakeyama H, McGuire MH, Haemmerle M, Vidal-Anaya V, Olsen C, Rodriguez-Aguayo C, Filant J, Ehsanipour EA, Herbrich SM, Maiti SN, Huang L, Kim JH, Zhang X, Han HD, Armaiz-Pena GN, Seviour EG, Tucker S, Zhang M, Yang D, Cooper LJ, Ali-Fehmi R, Bar-Eli M, Lee JS, Ram PT, Baggerly KA, Lopez-Berestein G, Hung MC, Sood AK Nature communications 27041221 Nat Commun 2016 Apr 4
MicroRNAs in Chronic Lymphocytic Leukemia: An Old Disease with New Genetic Insights. Ciccone M, Calin GA MicroRNA (Shariqah, United Arab Emirates) 27568792 Microrna 2016
Antiangiogenic and tumour inhibitory effects of downregulating tumour endothelial FABP4. Harjes U, Bridges E, Gharpure KM, Roxanis I, Sheldon H, Miranda F, Mangala LS, Pradeep S, Lopez-Berestein G, Ahmed A, Fielding B, Sood AK, Harris AL Oncogene 27568980 Oncogene 2017 Feb 16
miR-181a/b therapy in lung cancer: reality or myth? Braicu C, Gulei D, Cojocneanu R, Raduly L, Jurj A, Knutsen E, Calin GA, Berindan-Neagoe I Molecular oncology 30548184 Mol Oncol 2019 Jan
ncRNA therapy with miRNA-22-3p suppresses the growth of triple-negative breast cancer. Gorur A, Bayraktar R, Ivan C, Mokhlis HA, Bayraktar E, Kahraman N, Karakas D, Karamil S, Kabil NN, Kanlikilicer P, Aslan B, Tamer L, Wang Z, Cristini V, Lopez-Berestein G, Calin G, Ozpolat B Molecular therapy. Nucleic acids 33614241 Mol Ther Nucleic Acids 2021 Mar 5
Editing and Chemical Modifications on Non-Coding RNAs in Cancer: A New Tale with Clinical Significance. Torsin LI, Petrescu GED, Sabo AA, Chen B, Brehar FM, Dragomir MP, Calin GA International journal of molecular sciences 33430133 Int J Mol Sci 2021 Jan 8
MicroRNAs, Regulatory Messengers Inside and Outside Cancer Cells. Anfossi S, Fu X, Nagvekar R, Calin GA Advances in experimental medicine and biology 29754176 Adv Exp Med Biol 2018
OncomiR-10b hijacks the small molecule inhibitor linifanib in human cancers. Monroig-Bosque PDC, Shah MY, Fu X, Fuentes-Mattei E, Ling H, Ivan C, Nouraee N, Huang B, Chen L, Pileczki V, Redis RS, Jung EJ, Zhang X, Lehrer M, Nagvekar R, Mafra ACP, Monroig-Bosque MDM, Irimie A, Rivera C, Dan Dumitru C, Berindan-Neagoe I, Nikonowicz EP, Zhang S, Calin GA Scientific reports 30166612 Sci Rep 2018 Aug 30
Isolation of Extracellular RNA from Serum/Plasma. Filant J, Nejad P, Paul A, Simonson B, Srinivasan S, Zhang X, Balaj L, Das S, Gandhi R, Laurent LC, Sood AK Methods in molecular biology (Clifton, N.J.) 29388135 Methods Mol Biol 2018
Hodgkin Lymphoma Cells Have a Specific Long Noncoding RNA Expression Pattern. Anfossi S, Calin GA The American journal of pathology 27456130 Am J Pathol 2016 Sep
Therapeutic Targeting of AXL Receptor Tyrosine Kinase Inhibits Tumor Growth and Intraperitoneal Metastasis in Ovarian Cancer Models. Kanlikilicer P, Ozpolat B, Aslan B, Bayraktar R, Gurbuz N, Rodriguez-Aguayo C, Bayraktar E, Denizli M, Gonzalez-Villasana V, Ivan C, Lokesh GLR, Amero P, Catuogno S, Haemmerle M, Wu SY, Mitra R, Gorenstein DG, Volk DE, de Franciscis V, Sood AK, Lopez-Berestein G Molecular therapy. Nucleic acids 29246304 Mol Ther Nucleic Acids 2017 Dec 15
The Many Faces of Long Noncoding RNAs in Cancer. Wu X, Tudoran OM, Calin GA, Ivan M Antioxidants & redox signaling 28793797 Antioxid Redox Signal 2018 Sep 20
Circulating miRNAs in sepsis-A network under attack: An in-silico prediction of the potential existence of miRNA sponges in sepsis. Vasilescu C, Dragomir M, Tanase M, Giza D, Purnichescu-Purtan R, Chen M, Yeung SJ, Calin GA PloS one 28820886 PLoS One 2017
Differential Effects of EGFL6 on Tumor versus Wound Angiogenesis. Noh K, Mangala LS, Han HD, Zhang N, Pradeep S, Wu SY, Ma S, Mora E, Rupaimoole R, Jiang D, Wen Y, Shahzad MMK, Lyons Y, Cho M, Hu W, Nagaraja AS, Haemmerle M, Mak CSL, Chen X, Gharpure KM, Deng H, Xiong W, Kingsley CV, Liu J, Jennings N, Birrer MJ, Bouchard RR, Lopez-Berestein G, Coleman RL, An Z, Sood AK Cell reports 29212026 Cell Rep 2017 Dec 5
Exosomes from Glioma-Associated Mesenchymal Stem Cells Increase the Tumorigenicity of Glioma Stem-like Cells via Transfer of miR-1587. Figueroa J, Phillips LM, Shahar T, Hossain A, Gumin J, Kim H, Bean AJ, Calin GA, Fueyo J, Walters ET, Kalluri R, Verhaak RG, Lang FF Cancer research 28855213 Cancer Res 2017 Nov 1
Induction of anti-VEGF therapy resistance by upregulated expression of microseminoprotein (MSMP). Mitamura T, Pradeep S, McGuire M, Wu SY, Ma S, Hatakeyama H, Lyons YA, Hisamatsu T, Noh K, Villar-Prados A, Chen X, Ivan C, Rodriguez-Aguayo C, Hu W, Lopez-Berestein G, Coleman RL, Sood AK Oncogene 29059175 Oncogene 2018 Feb 8
Chromosomal Instability in Tumor Initiation and Development. Bach DH, Zhang W, Sood AK Cancer research 31350294 Cancer Res 2019 Aug 15
GLS2 is protumorigenic in breast cancers. Dias MM, Adamoski D, Dos Reis LM, Ascenção CFR, de Oliveira KRS, Mafra ACP, da Silva Bastos AC, Quintero M, de G Cassago C, Ferreira IM, Fidelis CHV, Rocco SA, Bajgelman MC, Stine Z, Berindan-Neagoe I, Calin GA, Ambrosio ALB, Dias SMG Oncogene 31541193 Oncogene 2020 Jan
Tumor core biopsies adequately represent immune microenvironment of high-grade serous carcinoma. Lara OD, Krishnan S, Wang Z, Corvigno S, Zhong Y, Lyons Y, Dood R, Hu W, Qi L, Liu J, Coleman RL, Westin SN, Fleming ND, Cristini V, Rao A, Burks J, Sood AK Scientific reports 31772388 Sci Rep 2019 Nov 26
A-to-I-edited miRNA-379-5p inhibits cancer cell proliferation through CD97-induced apoptosis. Xu X, Wang Y, Mojumdar K, Zhou Z, Jeong KJ, Mangala LS, Yu S, Tsang YH, Rodriguez-Aguayo C, Lu Y, Lopez-Berestein G, Sood AK, Mills GB, Liang H The Journal of clinical investigation 31682236 J Clin Invest 2019 Dec 2
FABP4 as a key determinant of metastatic potential of ovarian cancer. Gharpure KM, Pradeep S, Sans M, Rupaimoole R, Ivan C, Wu SY, Bayraktar E, Nagaraja AS, Mangala LS, Zhang X, Haemmerle M, Hu W, Rodriguez-Aguayo C, McGuire M, Mak CSL, Chen X, Tran MA, Villar-Prados A, Pena GA, Kondetimmanahalli R, Nini R, Koppula P, Ram P, Liu J, Lopez-Berestein G, Baggerly K, S Eberlin L, Sood AK Nature communications 30050129 Nat Commun 2018 Jul 26
Neuroendocrine influences on cancer biology. Thaker PH, Sood AK Seminars in cancer biology 18201896 Semin Cancer Biol 2008 Jun
Gut microbiota: a new player in regulating immune- and chemo-therapy efficacy. Anfossi S, Calin GA Cancer drug resistance (Alhambra, Calif.) 33062956 Cancer Drug Resist 2020
PTEN Expression as a Predictor of Response to Focal Adhesion Kinase Inhibition in Uterine Cancer. Thanapprapasr D, Previs RA, Hu W, Ivan C, Armaiz-Pena GN, Dorniak PL, Hansen JM, Rupaimoole R, Huang J, Dalton HJ, Ali-Fehmi R, Coleman RL, Sood AK Molecular cancer therapeutics 25833835 Mol Cancer Ther 2015 Jun
CDK5 Regulates Paclitaxel Sensitivity in Ovarian Cancer Cells by Modulating AKT Activation, p21Cip1- and p27Kip1-Mediated G1 Cell Cycle Arrest and Apoptosis. Zhang S, Lu Z, Mao W, Ahmed AA, Yang H, Zhou J, Jennings N, Rodriguez-Aguayo C, Lopez-Berestein G, Miranda R, Qiao W, Baladandayuthapani V, Li Z, Sood AK, Liu J, Le XF, Bast RC Jr PloS one 26146988 PLoS One 2015
Cancer exosomes perform cell-independent microRNA biogenesis and promote tumorigenesis. Melo SA, Sugimoto H, O'Connell JT, Kato N, Villanueva A, Vidal A, Qiu L, Vitkin E, Perelman LT, Melo CA, Lucci A, Ivan C, Calin GA, Kalluri R Cancer cell 25446899 Cancer Cell 2014 Nov 10
Exosomes: a role for naturally occurring nanovesicles in cancer growth, diagnosis and treatment. Srivastava A, Filant J, Moxley KM, Sood A, McMeekin S, Ramesh R Current gene therapy 25537774 Curr Gene Ther 2015
PDL1 Regulation by p53 via miR-34. Cortez MA, Ivan C, Valdecanas D, Wang X, Peltier HJ, Ye Y, Araujo L, Carbone DP, Shilo K, Giri DK, Kelnar K, Martin D, Komaki R, Gomez DR, Krishnan S, Calin GA, Bader AG, Welsh JW Journal of the National Cancer Institute 26577528 J Natl Cancer Inst 2016 Jan
Key principles of miRNA involvement in human diseases. Giza DE, Vasilescu C, Calin GA Discoveries (Craiova, Romania) 26317116 Discoveries (Craiova) 2014 Oct-Dec
Targeting the tumour microenvironment in ovarian cancer. Hansen JM, Coleman RL, Sood AK European journal of cancer (Oxford, England : 1990) 26849037 Eur J Cancer 2016 Mar
Allele-Specific Reprogramming of Cancer Metabolism by the Long Non-coding RNA CCAT2. Redis RS, Vela LE, Lu W, Ferreira de Oliveira J, Ivan C, Rodriguez-Aguayo C, Adamoski D, Pasculli B, Taguchi A, Chen Y, Fernandez AF, Valledor L, Van Roosbroeck K, Chang S, Shah M, Kinnebrew G, Han L, Atlasi Y, Cheung LH, Huang GY, Monroig P, Ramirez MS, Catela Ivkovic T, Van L, Ling H, Gafà R, Kapitanovic S, Lanza G, Bankson JA, Huang P, Lai SY, Bast RC, Rosenblum MG, Radovich M, Ivan M, Bartholomeusz G, Liang H, Fraga MF, Widger WR, Hanash S, Berindan-Neagoe I, Lopez-Berestein G, Ambrosio ALB, Gomes Dias SM, Calin GA Molecular cell 26853146 Mol Cell 2016 Feb 18
Assessment of In Vivo siRNA Delivery in Cancer Mouse Models. Hatakeyama H, Wu SY, Mangala LS, Lopez-Berestein G, Sood AK Methods in molecular biology (Clifton, N.J.) 26721492 Methods Mol Biol 2016
Prediction of anti-angiogenesis escape. Mitamura T, Gourley C, Sood AK Gynecologic oncology 26748214 Gynecol Oncol 2016 Apr
Ubiquitous Release of Exosomal Tumor Suppressor miR-6126 from Ovarian Cancer Cells. Kanlikilicer P, Rashed MH, Bayraktar R, Mitra R, Ivan C, Aslan B, Zhang X, Filant J, Silva AM, Rodriguez-Aguayo C, Bayraktar E, Pichler M, Ozpolat B, Calin GA, Sood AK, Lopez-Berestein G Cancer research 27742688 Cancer Res 2016 Dec 15
Combining Anti-Mir-155 with Chemotherapy for the Treatment of Lung Cancers. Van Roosbroeck K, Fanini F, Setoyama T, Ivan C, Rodriguez-Aguayo C, Fuentes-Mattei E, Xiao L, Vannini I, Redis RS, D'Abundo L, Zhang X, Nicoloso MS, Rossi S, Gonzalez-Villasana V, Rupaimoole R, Ferracin M, Morabito F, Neri A, Ruvolo PP, Ruvolo VR, Pecot CV, Amadori D, Abruzzo L, Calin S, Wang X, You MJ, Ferrajoli A, Orlowski R, Plunkett W, Lichtenberg TM, Davuluri RV, Berindan-Neagoe I, Negrini M, Wistuba II, Kantarjian HM, Sood AK, Lopez-Berestein G, Keating MJ, Fabbri M, Calin GA Clinical cancer research : an official journal of the American Association for Cancer Research 27903673 Clin Cancer Res 2017 Jun 1
Direct Upregulation of STAT3 by MicroRNA-551b-3p Deregulates Growth and Metastasis of Ovarian Cancer. Chaluvally-Raghavan P, Jeong KJ, Pradeep S, Silva AM, Yu S, Liu W, Moss T, Rodriguez-Aguayo C, Zhang D, Ram P, Liu J, Lu Y, Lopez-Berestein G, Calin GA, Sood AK, Mills GB Cell reports 27160903 Cell Rep 2016 May 17
Exosome-mediated transfer of microRNAs within the tumor microenvironment and neuroblastoma resistance to chemotherapy. Challagundla KB, Wise PM, Neviani P, Chava H, Murtadha M, Xu T, Kennedy R, Ivan C, Zhang X, Vannini I, Fanini F, Amadori D, Calin GA, Hadjidaniel M, Shimada H, Jong A, Seeger RC, Asgharzadeh S, Goldkorn A, Fabbri M Journal of the National Cancer Institute 25972604 J Natl Cancer Inst 2015 Jul
The Potential of MicroRNAs as Prostate Cancer Biomarkers. Fabris L, Ceder Y, Chinnaiyan AM, Jenster GW, Sorensen KD, Tomlins S, Visakorpi T, Calin GA European urology 26806656 Eur Urol 2016 Aug
Long Noncoding RNA Ceruloplasmin Promotes Cancer Growth by Altering Glycolysis. Rupaimoole R, Lee J, Haemmerle M, Ling H, Previs RA, Pradeep S, Wu SY, Ivan C, Ferracin M, Dennison JB, Millward NMZ, Nagaraja AS, Gharpure KM, McGuire M, Sam N, Armaiz-Pena GN, Sadaoui NC, Rodriguez-Aguayo C, Calin GA, Drapkin RI, Kovacs J, Mills GB, Zhang W, Lopez-Berestein G, Bhattacharya PK, Sood AK Cell reports 26686630 Cell Rep 2015 Dec 22
Targeting Forward and Reverse EphB4/EFNB2 Signaling by a Peptide with Dual Functions. Xiong C, Wen Y, Zhao J, Yin D, Xu L, Chelariu-Raicu A, Yao C, Leng X, Liu J, Chaudhari RR, Zhang S, Sood AK, Li C Scientific reports 31949258 Sci Rep 2020 Jan 16
Noncoding RNAs in Extracellular Fluids as Cancer Biomarkers: The New Frontier of Liquid Biopsies. Pardini B, Sabo AA, Birolo G, Calin GA Cancers 31416190 Cancers (Basel) 2019 Aug 14
CD63-mediated cloaking of VEGF in small extracellular vesicles contributes to anti-VEGF therapy resistance. Ma S, Mangala LS, Hu W, Bayaktar E, Yokoi A, Hu W, Pradeep S, Lee S, Piehowski PD, Villar-Prados A, Wu SY, McGuire MH, Lara OD, Rodriguez-Aguayo C, LaFargue CJ, Jennings NB, Rodland KD, Liu T, Kundra V, Ram PT, Ramakrishnan S, Lopez-Berestein G, Coleman RL, Sood AK Cell reports 34407412 Cell Rep 2021 Aug 17
Classical and noncanonical functions of miRNAs in cancers. Dragomir MP, Knutsen E, Calin GA Trends in genetics : TIG 34728089 Trends Genet 2022 Apr
Anti-miR-93-5p therapy prolongs sepsis survival by restoring the peripheral immune response. Dragomir MP, Fuentes-Mattei E, Winkle M, Okubo K, Bayraktar R, Knutsen E, Qdaisat A, Chen M, Li Y, Shimizu M, Pang L, Liu K, Liu X, Anfossi S, Zhang H, Koch I, Tran AM, Mohapatra S, Ton A, Kaplan M, Anderson MW, Rothfuss SJ, Silasi R, Keshari RS, Ferracin M, Ivan C, Rodriguez-Aguayo C, Lopez-Berestein G, Georgescu C, Banerjee PP, Basar R, Li Z, Horst D, Vasilescu C, Bertilaccio MTS, Rezvani K, Lupu F, Yeung SC, Calin GA The Journal of clinical investigation 37261908 J Clin Invest 2023 Jul 17
Extracellular RNAs: development as biomarkers of human disease. Quinn JF, Patel T, Wong D, Das S, Freedman JE, Laurent LC, Carter BS, Hochberg F, Van Keuren-Jensen K, Huentelman M, Spetzler R, Kalani MY, Arango J, Adelson PD, Weiner HL, Gandhi R, Goilav B, Putterman C, Saugstad JA Journal of extracellular vesicles 26320940 J Extracell Vesicles 2015
Urine microRNA as potential biomarkers of autosomal dominant polycystic kidney disease progression: description of miRNA profiles at baseline. Ben-Dov IZ, Tan YC, Morozov P, Wilson PD, Rennert H, Blumenfeld JD, Tuschl T PloS one 24489795 PLoS One 2014
Serum MicroRNA Transcriptomics and Acute Rejection or Recurrent Hepatitis C Virus in Human Liver Allograft Recipients: A Pilot Study. Muthukumar T, Akat KM, Yang H, Schwartz JE, Li C, Bang H, Ben-Dov IZ, Lee JR, Ikle D, Demetris AJ, Tuschl T, Suthanthiran M Transplantation 33979314 Transplantation 2022 Apr 1
Characterizing Expression and Processing of Precursor and Mature Human tRNAs by Hydro-tRNAseq and PAR-CLIP. Gogakos T, Brown M, Garzia A, Meyer C, Hafner M, Tuschl T Cell reports 28793268 Cell Rep 2017 Aug 8
Cell and Microvesicle Urine microRNA Deep Sequencing Profiles from Healthy Individuals: Observations with Potential Impact on Biomarker Studies. Ben-Dov IZ, Whalen VM, Goilav B, Max KE, Tuschl T PloS one 26785265 PLoS One 2016
Sex and Kidney Transplantation: Why Can't a Woman Be More Like a Man? August P, Suthanthiran M Journal of the American Society of Nephrology : JASN 28754789 J Am Soc Nephrol 2017 Oct
Detection of circulating extracellular mRNAs by modified small-RNA-sequencing analysis. Akat KM, Lee YA, Hurley A, Morozov P, Max KE, Brown M, Bogardus K, Sopeyin A, Hildner K, Diacovo TG, Neurath MF, Borggrefe M, Tuschl T JCI insight 30973829 JCI Insight 2019 Apr 11
A Markov Multi-State model of lupus nephritis urine biomarker panel dynamics in children: Predicting changes in disease activity. Smith EMD, Eleuteri A, Goilav B, Lewandowski L, Phuti A, Rubinstein T, Wahezi D, Jones CA, Marks SD, Corkhill R, Pilkington C, Tullus K, Putterman C, Scott C, Fisher AC, Beresford MW Clinical immunology (Orlando, Fla.) 30391651 Clin Immunol 2019 Jan
Human plasma and serum extracellular small RNA reference profiles and their clinical utility. Max KEA, Bertram K, Akat KM, Bogardus KA, Li J, Morozov P, Ben-Dov IZ, Li X, Weiss ZR, Azizian A, Sopeyin A, Diacovo TG, Adamidi C, Williams Z, Tuschl T Proceedings of the National Academy of Sciences of the United States of America 29777089 Proc Natl Acad Sci U S A 2018 Jun 5
Comprehensive Search for Novel Circulating miRNAs and Axon Guidance Pathway Proteins Associated with Risk of ESKD in Diabetes. Satake E, Saulnier PJ, Kobayashi H, Gupta MK, Looker HC, Wilson JM, Md Dom ZI, Ihara K, O'Neil K, Krolewski B, Pipino C, Pavkov ME, Nair V, Bitzer M, Niewczas MA, Kretzler M, Mauer M, Doria A, Najafian B, Kulkarni RN, Duffin KL, Pezzolesi MG, Kahn CR, Nelson RG, Krolewski AS Journal of the American Society of Nephrology : JASN 34140396 J Am Soc Nephrol 2021 Sep
Detection of wild-type EGFR amplification and EGFRvIII mutation in CSF-derived extracellular vesicles of glioblastoma patients. Figueroa JM, Skog J, Akers J, Li H, Komotar R, Jensen R, Ringel F, Yang I, Kalkanis S, Thompson R, LoGuidice L, Berghoff E, Parsa A, Liau L, Curry W, Cahill D, Bettegowda C, Lang FF, Chiocca EA, Henson J, Kim R, Breakefield X, Chen C, Messer K, Hochberg F, Carter BS Neuro-oncology 28453784 Neuro Oncol 2017 Oct 19
ExRNA in Biofluids as Biomarkers for Brain Tumors. Rennert RC, Hochberg FH, Carter BS Cellular and molecular neurobiology 26993514 Cell Mol Neurobiol 2016 Apr
Liquid Biopsy Strategies to Distinguish Progression from Pseudoprogression and Radiation Necrosis in Glioblastomas. Yekula A, Muralidharan K, Rosh ZS, Youngkin AE, Kang KM, Balaj L, Carter BS Advanced biosystems 32484293 Adv Biosyst 2020 Dec
Meeting report: discussions and preliminary findings on extracellular RNA measurement methods from laboratories in the NIH Extracellular RNA Communication Consortium. Laurent LC, Abdel-Mageed AB, Adelson PD, Arango J, Balaj L, Breakefield X, Carlson E, Carter BS, Majem B, Chen CC, Cocucci E, Danielson K, Courtright A, Das S, Abd Elmageed ZY, Enderle D, Ezrin A, Ferrer M, Freedman J, Galas D, Gandhi R, Huentelman MJ, Van Keuren-Jensen K, Kalani Y, Kim Y, Krichevsky AM, Lai C, Lal-Nag M, Laurent CD, Leonardo T, Li F, Malenica I, Mondal D, Nejad P, Patel T, Raffai RL, Rubio R, Skog J, Spetzler R, Sun J, Tanriverdi K, Vickers K, Wang L, Wang Y, Wei Z, Weiner HL, Wong D, Yan IK, Yeri A, Gould S Journal of extracellular vesicles 26320937 J Extracell Vesicles 2015
Analysis of extracellular RNA in cerebrospinal fluid. Saugstad JA, Lusardi TA, Van Keuren-Jensen KR, Phillips JI, Lind B, Harrington CA, McFarland TJ, Courtright AL, Reiman RA, Yeri AS, Kalani MYS, Adelson PD, Arango J, Nolan JP, Duggan E, Messer K, Akers JC, Galasko DR, Quinn JF, Carter BS, Hochberg FH Journal of extracellular vesicles 28717417 J Extracell Vesicles 2017
Detection of platelet vesicles by flow cytometry. Nolan JP, Jones JC Platelets 28277059 Platelets 2017 May
BEAMing and Droplet Digital PCR Analysis of Mutant IDH1 mRNA in Glioma Patient Serum and Cerebrospinal Fluid Extracellular Vesicles. Chen WW, Balaj L, Liau LM, Samuels ML, Kotsopoulos SK, Maguire CA, Loguidice L, Soto H, Garrett M, Zhu LD, Sivaraman S, Chen C, Wong ET, Carter BS, Hochberg FH, Breakefield XO, Skog J Molecular therapy. Nucleic acids 23881452 Mol Ther Nucleic Acids 2013 Jul 23
Neuro-oncologic applications of exosomes, microvesicles, and other nano-sized extracellular particles. Gonda DD, Akers JC, Kim R, Kalkanis SN, Hochberg FH, Chen CC, Carter BS Neurosurgery 23277376 Neurosurgery 2013 Apr
MiR-21 in the extracellular vesicles (EVs) of cerebrospinal fluid (CSF): a platform for glioblastoma biomarker development. Akers JC, Ramakrishnan V, Kim R, Skog J, Nakano I, Pingle S, Kalinina J, Hua W, Kesari S, Mao Y, Breakefield XO, Hochberg FH, Van Meir EG, Carter BS, Chen CC PloS one 24205116 PLoS One 2013
Soluble Urokinase Receptor Is Released Selectively by Glioblastoma Cells That Express Epidermal Growth Factor Receptor Variant III and Promotes Tumor Cell Migration and Invasion. Gilder AS, Jones KA, Hu J, Wang L, Chen CC, Carter BS, Gonias SL The Journal of biological chemistry 25837250 J Biol Chem 2015 Jun 12
Analysis of Individual Extracellular Vesicles by Flow Cytometry. Nolan JP, Duggan E Methods in molecular biology (Clifton, N.J.) 29071676 Methods Mol Biol 2018
Optimizing preservation of extracellular vesicular miRNAs derived from clinical cerebrospinal fluid. Akers JC, Ramakrishnan V, Yang I, Hua W, Mao Y, Carter BS, Chen CC Cancer biomarkers : section A of Disease markers 27062568 Cancer Biomark 2016 Mar 25
Extracellular Vesicles in Glioblastoma Tumor Microenvironment. Yekula A, Yekula A, Muralidharan K, Kang K, Carter BS, Balaj L Frontiers in immunology 32038644 Front Immunol 2019
From laboratory to clinic: Translation of extracellular vesicle based cancer biomarkers. Yekula A, Muralidharan K, Kang KM, Wang L, Balaj L, Carter BS Methods (San Diego, Calif.) 32061674 Methods 2020 May 1
Extracellular vesicles, tissue factor, cancer and thrombosis - discussion themes of the ISEV 2014 Educational Day. Gardiner C, Harrison P, Belting M, Böing A, Campello E, Carter BS, Collier ME, Coumans F, Ettelaie C, van Es N, Hochberg FH, Mackman N, Rennert RC, Thaler J, Rak J, Nieuwland R Journal of extracellular vesicles 25773446 J Extracell Vesicles 2015
Integration of extracellular RNA profiling data using metadata, biomedical ontologies and Linked Data technologies. Subramanian SL, Kitchen RR, Alexander R, Carter BS, Cheung KH, Laurent LC, Pico A, Roberts LR, Roth ME, Rozowsky JS, Su AI, Gerstein MB, Milosavljevic A Journal of extracellular vesicles 26320941 J Extracell Vesicles 2015
A cerebrospinal fluid microRNA signature as biomarker for glioblastoma. Akers JC, Hua W, Li H, Ramakrishnan V, Yang Z, Quan K, Zhu W, Li J, Figueroa J, Hirshman BR, Miller B, Piccioni D, Ringel F, Komotar R, Messer K, Galasko DR, Hochberg F, Mao Y, Carter BS, Chen CC Oncotarget 28978155 Oncotarget 2017 Sep 15
Comparative Analysis of Technologies for Quantifying Extracellular Vesicles (EVs) in Clinical Cerebrospinal Fluids (CSF). Akers JC, Ramakrishnan V, Nolan JP, Duggan E, Fu CC, Hochberg FH, Chen CC, Carter BS PloS one 26901428 PLoS One 2016
Liquid biopsy for brain tumors. Shankar GM, Balaj L, Stott SL, Nahed B, Carter BS Expert review of molecular diagnostics 28875730 Expert Rev Mol Diagn 2017 Oct
Biogenesis of extracellular vesicles (EV): exosomes, microvesicles, retrovirus-like vesicles, and apoptotic bodies. Akers JC, Gonda D, Kim R, Carter BS, Chen CC Journal of neuro-oncology 23456661 J Neurooncol 2013 May
Glioma diagnostics and biomarkers: an ongoing challenge in the field of medicine and science. Hochberg FH, Atai NA, Gonda D, Hughes MS, Mawejje B, Balaj L, Carter RS Expert review of molecular diagnostics 24746164 Expert Rev Mol Diagn 2014 May
Navigating the Landscape of Tumor Extracellular Vesicle Heterogeneity. Roy S, Lin HY, Chou CY, Huang CH, Small J, Sadik N, Ayinon CM, Lansbury E, Cruz L, Yekula A, Jones PS, Balaj L, Carter BS International journal of molecular sciences 30889795 Int J Mol Sci 2019 Mar 18
Immune evasion mediated by PD-L1 on glioblastoma-derived extracellular vesicles. Ricklefs FL, Alayo Q, Krenzlin H, Mahmoud AB, Speranza MC, Nakashima H, Hayes JL, Lee K, Balaj L, Passaro C, Rooj AK, Krasemann S, Carter BS, Chen CC, Steed T, Treiber J, Rodig S, Yang K, Nakano I, Lee H, Weissleder R, Breakefield XO, Godlewski J, Westphal M, Lamszus K, Freeman GJ, Bronisz A, Lawler SE, Chiocca EA Science advances 29532035 Sci Adv 2018 Mar
Extracellular vesicles: the growth as diagnostics and therapeutics; a survey. Roy S, Hochberg FH, Jones PS Journal of extracellular vesicles 29511461 J Extracell Vesicles 2018
TERT Promoter Mutation Analysis for Blood-Based Diagnosis and Monitoring of Gliomas. Muralidharan K, Yekula A, Small JL, Rosh ZS, Kang KM, Wang L, Lau S, Zhang H, Lee H, Bettegowda C, Chicoine MR, Kalkanis SN, Shankar GM, Nahed BV, Curry WT, Jones PS, Cahill DP, Balaj L, Carter BS Clinical cancer research : an official journal of the American Association for Cancer Research 33051308 Clin Cancer Res 2021 Jan 1
miRNA contents of cerebrospinal fluid extracellular vesicles in glioblastoma patients. Akers JC, Ramakrishnan V, Kim R, Phillips S, Kaimal V, Mao Y, Hua W, Yang I, Fu CC, Nolan J, Nakano I, Yang Y, Beaulieu M, Carter BS, Chen CC Journal of neuro-oncology 25903655 J Neurooncol 2015 Jun
An integrated magneto-electrochemical device for the rapid profiling of tumour extracellular vesicles from blood plasma. Park J, Park JS, Huang CH, Jo A, Cook K, Wang R, Lin HY, Van Deun J, Li H, Min J, Wang L, Yoon G, Carter BS, Balaj L, Choi GS, Castro CM, Weissleder R, Lee H Nature biomedical engineering 34183802 Nat Biomed Eng 2021 Jul
Tumor-derived exosomes in oncogenic reprogramming and cancer progression. Saleem SN, Abdel-Mageed AB Cellular and molecular life sciences : CMLS 25156068 Cell Mol Life Sci 2015 Jan
MicroRNAs in prostate cancer: From function to biomarker discovery. Moustafa AA, Kim H, Albeltagy RS, El-Habit OH, Abdel-Mageed AB Experimental biology and medicine (Maywood, N.J.) 29932371 Exp Biol Med (Maywood) 2018 Jun
Manumycin A suppresses exosome biogenesis and secretion via targeted inhibition of Ras/Raf/ERK1/2 signaling and hnRNP H1 in castration-resistant prostate cancer cells. Datta A, Kim H, Lal M, McGee L, Johnson A, Moustafa AA, Jones JC, Mondal D, Ferrer M, Abdel-Mageed AB Cancer letters 28844715 Cancer Lett 2017 Nov 1
Neoplastic reprogramming of patient-derived adipose stem cells by prostate cancer cell-associated exosomes. Abd Elmageed ZY, Yang Y, Thomas R, Ranjan M, Mondal D, Moroz K, Fang Z, Rezk BM, Moparty K, Sikka SC, Sartor O, Abdel-Mageed AB Stem cells (Dayton, Ohio) 24715691 Stem Cells 2014 Apr
Potential functional applications of extracellular vesicles: a report by the NIH Common Fund Extracellular RNA Communication Consortium. Quesenberry PJ, Aliotta J, Camussi G, Abdel-Mageed AB, Wen S, Goldberg L, Zhang HG, Tetta C, Franklin J, Coffey RJ, Danielson K, Subramanya V, Ghiran I, Das S, Chen CC, Pusic KM, Pusic AD, Chatterjee D, Kraig RP, Balaj L, Dooner M Journal of extracellular vesicles 26320942 J Extracell Vesicles 2015
Nanosomes carrying doxorubicin exhibit potent anticancer activity against human lung cancer cells. Srivastava A, Amreddy N, Babu A, Panneerselvam J, Mehta M, Muralidharan R, Chen A, Zhao YD, Razaq M, Riedinger N, Kim H, Liu S, Wu S, Abdel-Mageed AB, Munshi A, Ramesh R Scientific reports 27941871 Sci Rep 2016 Dec 12
Identification of microRNA signature and potential pathway targets in prostate cancer. Moustafa AA, Ziada M, Elshaikh A, Datta A, Kim H, Moroz K, Srivastav S, Thomas R, Silberstein JL, Moparty K, Salem FE, El-Habit OH, Abdel-Mageed AB Experimental biology and medicine (Maywood, N.J.) 27903835 Exp Biol Med (Maywood) 2017 Mar
RNA Sequencing Analysis of Salivary Extracellular RNA. Majem B, Li F, Sun J, Wong DT Methods in molecular biology (Clifton, N.J.) 27924586 Methods Mol Biol 2017
Emerging horizons of salivary diagnostics for periodontal disease. Fuentes L, Yakob M, Wong DT British dental journal 25415010 Br Dent J 2014 Nov
Clinical validity of saliva and novel technology for cancer detection. Kaczor-Urbanowicz KE, Wei F, Rao SL, Kim J, Shin H, Cheng J, Tu M, Wong DTW, Kim Y Biochimica et biophysica acta. Reviews on cancer 31152821 Biochim Biophys Acta Rev Cancer 2019 Aug
Novel approaches for bioinformatic analysis of salivary RNA sequencing data for development. Kaczor-Urbanowicz KE, Kim Y, Li F, Galeev T, Kitchen RR, Gerstein M, Koyano K, Jeong SH, Wang X, Elashoff D, Kang SY, Kim SM, Kim K, Kim S, Chia D, Xiao X, Rozowsky J, Wong DTW Bioinformatics (Oxford, England) 28961734 Bioinformatics 2018 Jan 1
Noncoding RNAs in human saliva as potential disease biomarkers. Lin X, Lo HC, Wong DT, Xiao X Frontiers in genetics 25999984 Front Genet 2015
Salivary extracellular RNA biomarkers for insulin resistance detection in hispanics. Zhang Y, Sun J, Li F, Grogan TR, Vergara JL, Luan Q, Park MS, Chia D, Elashoff D, Joshipura KJ, Wong DTW Diabetes research and clinical practice 28802700 Diabetes Res Clin Pract 2017 Oct
Human tRNA-Derived Small RNAs Modulate Host-Oral Microbial Interactions. He X, Li F, Bor B, Koyano K, Cen L, Xiao X, Shi W, Wong DTW Journal of dental research 29702004 J Dent Res 2018 Oct
Salivary biomarkers in cancer detection. Wang X, Kaczor-Urbanowicz KE, Wong DT Medical oncology (Northwood, London, England) 27943101 Med Oncol 2017 Jan
Saliva exosomes from pancreatic tumor-bearing mice modulate NK cell phenotype and antitumor cytotoxicity. Katsiougiannis S, Chia D, Kim Y, Singh RP, Wong DT FASEB journal : official publication of the Federation of American Societies for Experimental Biology 27895106 FASEB J 2017 Mar
Role of pancreatic cancer-derived exosomes in salivary biomarker development. Lau C, Kim Y, Chia D, Spielmann N, Eibl G, Elashoff D, Wei F, Lin YL, Moro A, Grogan T, Chiang S, Feinstein E, Schafer C, Farrell J, Wong DT The Journal of biological chemistry 23880764 J Biol Chem 2013 Sep 13
Salivary Biomarkers for Detection of Oral Squamous Cell Carcinoma in a Taiwanese Population. Gleber-Netto FO, Yakob M, Li F, Feng Z, Dai J, Kao HK, Chang YL, Chang KP, Wong DT Clinical cancer research : an official journal of the American Association for Cancer Research 26847061 Clin Cancer Res 2016 Jul 1
Role of Saliva and Salivary Diagnostics in the Advancement of Oral Health. Dawes C, Wong DTW Journal of dental research 30782091 J Dent Res 2019 Feb
Ultra-Short Circulating Tumor DNA (usctDNA) in Plasma and Saliva of Non-Small Cell Lung Cancer (NSCLC) Patients. Li F, Wei F, Huang WL, Lin CC, Li L, Shen MM, Yan Q, Liao W, Chia D, Tu M, Tang JH, Feng Z, Kim Y, Su WC, Wong DTW Cancers 32722209 Cancers (Basel) 2020 Jul 24
Plasma contains ultrashort single-stranded DNA in addition to nucleosomal cell-free DNA. Cheng J, Morselli M, Huang WL, Heo YJ, Pinheiro-Ferreira T, Li F, Wei F, Chia D, Kim Y, He HJ, Cole KD, Su WC, Pellegrini M, Wong DTW iScience 35800774 iScience 2022 Jul 15
The landscape of microRNA, Piwi-interacting RNA, and circular RNA in human saliva. Bahn JH, Zhang Q, Li F, Chan TM, Lin X, Kim Y, Wong DT, Xiao X Clinical chemistry 25376581 Clin Chem 2015 Jan
Salivary biomarkers for detection of oral squamous cell carcinoma - current state and recent advances. Yakob M, Fuentes L, Wang MB, Abemayor E, Wong DT Current oral health reports 24883261 Curr Oral Health Rep 2014 Jun 1
The emerging landscape of salivary diagnostics. Zhang Y, Sun J, Lin CC, Abemayor E, Wang MB, Wong DT Periodontology 2000 26662481 Periodontol 2000 2016 Feb
Saliva diagnostics - Current views and directions. Kaczor-Urbanowicz KE, Martin Carreras-Presas C, Aro K, Tu M, Garcia-Godoy F, Wong DT Experimental biology and medicine (Maywood, N.J.) 27903834 Exp Biol Med (Maywood) 2017 Mar
Differential Proteomic Analysis of Human Saliva using Tandem Mass Tags Quantification for Gastric Cancer Detection. Xiao H, Zhang Y, Kim Y, Kim S, Kim JJ, Kim KM, Yoshizawa J, Fan LY, Cao CX, Wong DT Scientific reports 26911362 Sci Rep 2016 Feb 25
Electric Field-Induced Release and Measurement Liquid Biopsy for Noninvasive Early Lung Cancer Assessment. Wei F, Strom CM, Cheng J, Lin CC, Hsu CY, Soo Hoo GW, Chia D, Kim Y, Li F, Elashoff D, Grognan T, Tu M, Liao W, Xian R, Grody WW, Su WC, Wong DTW The Journal of molecular diagnostics : JMD 30309763 J Mol Diagn 2018 Nov
Validation of two point-of-care tests against standard lab measures of NO in saliva and in serum. Modi A, Morou-Bermudez E, Vergara J, Patel RP, Nichols A, Joshipura K Nitric oxide : biology and chemistry 28153714 Nitric Oxide 2017 Apr 1
Salivary exRNA biomarkers to detect gingivitis and monitor disease regression. Kaczor-Urbanowicz KE, Trivedi HM, Lima PO, Camargo PM, Giannobile WV, Grogan TR, Gleber-Netto FO, Whiteman Y, Li F, Lee HJ, Dharia K, Aro K, Martin Carreras-Presas C, Amuthan S, Vartak M, Akin D, Al-Adbullah H, Bembey K, Klokkevold PR, Elashoff D, Barnes VM, Richter R, DeVizio W, Masters JG, Wong DTW Journal of clinical periodontology 29779262 J Clin Periodontol 2018 Jul
Discovery and Validation of Salivary Extracellular RNA Biomarkers for Noninvasive Detection of Gastric Cancer. Li F, Yoshizawa JM, Kim KM, Kanjanapangka J, Grogan TR, Wang X, Elashoff DE, Ishikawa S, Chia D, Liao W, Akin D, Yan X, Lee MS, Choi R, Kim SM, Kang SY, Bae JM, Sohn TS, Lee JH, Choi MG, Min BH, Lee JH, Kim JJ, Kim Y, Kim S, Wong DTW Clinical chemistry 30097497 Clin Chem 2018 Oct
Liquid Biopsy in Head and Neck Cancer: Promises and Challenges. Nonaka T, Wong DTW Journal of dental research 29513618 J Dent Res 2018 Jun
Saliva-Exosomics in Cancer: Molecular Characterization of Cancer-Derived Exosomes in Saliva. Nonaka T, Wong DTW The Enzymes 29054268 Enzymes 2017
Characterization of Human Salivary Extracellular RNA by Next-generation Sequencing. Li F, Kaczor-Urbanowicz KE, Sun J, Majem B, Lo HC, Kim Y, Koyano K, Rao SL, Kang SY, Kim SM, Kim KM, Kim S, Chia D, Elashoff D, Grogan TR, Xiao X, Wong DTW Clinical chemistry 29685897 Clin Chem 2018 Jul
Altered level of salivary placental growth factor is associated with preeclampsia. Rao SL, Taymoori A, Wong DTW, Maron JL Placenta 32056542 Placenta 2020 Jan 15
Longitudinal Monitoring of EGFR and PIK3CA Mutations by Saliva-Based EFIRM in Advanced NSCLC Patients With Local Ablative Therapy and Osimertinib Treatment: Two Case Reports. Li N, Guha U, Kim C, Ye L, Cheng J, Li F, Chia D, Wei F, Wong DTW Frontiers in oncology 32793495 Front Oncol 2020
RNAPro•SAL: a device for rapid and standardized collection of saliva RNA and proteins. Chiang SH, Thomas GA, Liao W, Grogan T, Buck RL, Fuentes L, Yakob M, Laughlin MJ, Schafer C, Nazmul-Hossain A, Wei F, Elashoff D, Slowey PD, Wong DT BioTechniques 25652029 Biotechniques 2015 Feb
Emerging technologies for salivaomics in cancer detection. Kaczor-Urbanowicz KE, Martín Carreras-Presas C, Kaczor T, Tu M, Wei F, Garcia-Godoy F, Wong DT Journal of cellular and molecular medicine 27862926 J Cell Mol Med 2017 Apr
Non-coding RNAs in saliva: emerging biomarkers for molecular diagnostics. Majem B, Rigau M, Reventós J, Wong DT International journal of molecular sciences 25898412 Int J Mol Sci 2015 Apr 17
Salivary extracellular noncoding RNA: emerging biomarkers for molecular diagnostics. Wong DT Clinical therapeutics 25795433 Clin Ther 2015 Mar 1
High Burden of Unrecognized Atrial Fibrillation in Rural India: An Innovative Community-Based Cross-Sectional Screening Program. Soni A, Earon A, Handorf A, Fahey N, Talati K, Bostrom J, Chon K, Napolitano C, Chin M, Sullivan J, Raithatha S, Goldberg R, Nimbalkar S, Allison J, Thanvi S, McManus D JMIR public health and surveillance 27737818 JMIR Public Health Surveill 2016 Oct 13
Blood-Derived Extracellular RNA and Platelet Pathobiology: Adding Pieces to a Complex Circulating Puzzle. Clancy L, Freedman JE Circulation research 26846635 Circ Res 2016 Feb 5
Genome-wide identification of microRNA expression quantitative trait loci. Huan T, Rong J, Liu C, Zhang X, Tanriverdi K, Joehanes R, Chen BH, Murabito JM, Yao C, Courchesne P, Munson PJ, O'Donnell CJ, Cox N, Johnson AD, Larson MG, Levy D, Freedman JE Nature communications 25791433 Nat Commun 2015 Mar 20
Inherited dysfunctional nitric oxide signaling and the pathobiology of atherothrombotic disease. Freedman JE Circulation research 24763461 Circ Res 2014 Apr 25
Discordant Expression of Circulating microRNA from Cellular and Extracellular Sources. Shah R, Tanriverdi K, Levy D, Larson M, Gerstein M, Mick E, Rozowsky J, Kitchen R, Murthy V, Mikalev E, Freedman JE PloS one 27123852 PLoS One 2016
Relations between circulating microRNAs and atrial fibrillation: data from the Framingham Offspring Study. McManus DD, Lin H, Tanriverdi K, Quercio M, Yin X, Larson MG, Ellinor PT, Levy D, Freedman JE, Benjamin EJ Heart rhythm 24444445 Heart Rhythm 2014 Apr
Sex- and age-interacting eQTLs in human complex diseases. Yao C, Joehanes R, Johnson AD, Huan T, Esko T, Ying S, Freedman JE, Murabito J, Lunetta KL, Metspalu A, Munson PJ, Levy D Human molecular genetics 24242183 Hum Mol Genet 2014 Apr 1
MicroRNAs in platelet function and cardiovascular disease. McManus DD, Freedman JE Nature reviews. Cardiology 26149483 Nat Rev Cardiol 2015 Dec
Clinical and Echocardiographic Correlates of Left Atrial Function Index: The Framingham Offspring Study. Sardana M, Nah G, Tsao CW, Ogunsua AA, Vittinghoff E, Thomas RC, Cheng S, Vaze A, Aragam JR, Mitchell GF, Benjamin EJ, Vasan RS, Aurigemma GP, Schiller NB, McManus DD, Parikh NI Journal of the American Society of Echocardiography : official publication of the American Society of Echocardiography 28735892 J Am Soc Echocardiogr 2017 Sep
Associations of Circulating Extracellular RNAs With Myocardial Remodeling and Heart Failure. Shah RV, Rong J, Larson MG, Yeri A, Ziegler O, Tanriverdi K, Murthy V, Liu X, Xiao C, Pico AR, Huan T, Levy D, Lewis GD, Rosenzweig A, Vasan RS, Das S, Freedman JE JAMA cardiology 30090932 JAMA Cardiol 2018 Sep 1
Proteins Altered by Surgical Weight Loss Highlight Biomarkers of Insulin Resistance in the Community. Shah RV, Hwang SJ, Yeri A, Tanriverdi K, Pico AR, Yao C, Murthy V, Ho J, Vitseva O, Demarco D, Shah S, Iafrati MD, Levy D, Freedman JE Arteriosclerosis, thrombosis, and vascular biology 30580566 Arterioscler Thromb Vasc Biol 2019 Jan
Platelets and Immunity: Going Viral. Koupenova M, Freedman JE Arteriosclerosis, thrombosis, and vascular biology 32579477 Arterioscler Thromb Vasc Biol 2020 Jul
Relations between plasma microRNAs, echocardiographic markers of atrial remodeling, and atrial fibrillation: Data from the Framingham Offspring study. Vaze A, Tran KV, Tanriverdi K, Sardana M, Lessard D, Donahue JK, Barton B, Aurigemma G, Lubitz SA, Lin H, Nasr GH, Mandapati A, Benjamin EJ, Vasan RS, Freedman JE, McManus DD PloS one 32813736 PLoS One 2020
A Translational Model for Venous Thromboembolism: MicroRNA Expression in Hibernating Black Bears. Fazzalari A, Basadonna G, Kucukural A, Tanriverdi K, Koupenova M, Pozzi N, Kakuturu J, Friedrich AU, Korstanje R, Fowler N, Belant JL, Beyer DE Jr, Brooks MB, Dickson EW, Blackwood M, Mueller C, Palesty JA, Freedman JE, Cahan MA The Journal of surgical research 32858321 J Surg Res 2021 Jan
The role of circulating platelet transcripts. Clancy L, Freedman JE Journal of thrombosis and haemostasis : JTH 26149043 J Thromb Haemost 2015 Jun
Practice Patterns and Outcomes Associated With Use of Anticoagulation Among Patients With Atrial Fibrillation During Sepsis. Walkey AJ, Quinn EK, Winter MR, McManus DD, Benjamin EJ JAMA cardiology 27487456 JAMA Cardiol 2016 Sep 1
Diverse human extracellular RNAs are widely detected in human plasma. Freedman JE, Gerstein M, Mick E, Rozowsky J, Levy D, Kitchen R, Das S, Shah R, Danielson K, Beaulieu L, Navarro FC, Wang Y, Galeev TR, Holman A, Kwong RY, Murthy V, Tanriverdi SE, Koupenova-Zamor M, Mikhalev E, Tanriverdi K Nature communications 27112789 Nat Commun 2016 Apr 26
Circulating Platelets as Mediators of Immunity, Inflammation, and Thrombosis. Koupenova M, Clancy L, Corkrey HA, Freedman JE Circulation research 29348254 Circ Res 2018 Jan 19
The role of RNA uptake in platelet heterogeneity. Clancy L, Beaulieu LM, Tanriverdi K, Freedman JE Thrombosis and haemostasis 28276570 Thromb Haemost 2017 May 3
Sex differences in platelet toll-like receptors and their association with cardiovascular risk factors. Koupenova M, Mick E, Mikhalev E, Benjamin EJ, Tanriverdi K, Freedman JE Arteriosclerosis, thrombosis, and vascular biology 25657311 Arterioscler Thromb Vasc Biol 2015 Apr
Platelets: the unsung hero of the immune response. Koupenova M, Freedman JE Journal of thrombosis and haemostasis : JTH 25471925 J Thromb Haemost 2015 Feb
Integromic analysis of genetic variation and gene expression identifies networks for cardiovascular disease phenotypes. Yao C, Chen BH, Joehanes R, Otlu B, Zhang X, Liu C, Huan T, Tastan O, Cupples LA, Meigs JB, Fox CS, Freedman JE, Courchesne P, O'Donnell CJ, Munson PJ, Keles S, Levy D Circulation 25533967 Circulation 2015 Feb 10
Nuts, Cardiovascular Health, and Diabetes. Shah R, Murthy V, Freedman JE Circulation research 30870120 Circ Res 2019 Mar 15
Addition of B-Type Natriuretic Peptide to Existing Clinical Risk Scores Enhances Identification of Patients at Risk for Atrial Fibrillation Recurrence After Pulmonary Vein Isolation. Shaikh AY, Esa N, Martin-Doyle W, Kinno M, Nieto I, Floyd KC, Browning C, Ennis C, Donahue JK, Rosenthal LS, McManus DD Critical pathways in cardiology 26569657 Crit Pathw Cardiol 2015 Dec
Study protocol for Smartphone Monitoring for Atrial fibrillation in Real-Time in India (SMART-India): a community-based screening and referral programme. Soni A, Karna S, Patel H, Fahey N, Raithatha S, Handorf A, Bostrom J, Bashar S, Talati K, Shah R, Goldberg RJ, Thanvi S, Phatak AG, Allison JJ, Chon K, Nimbalkar SM, McManus DD BMJ open 29247089 BMJ Open 2017 Dec 14
Unique Circulating MicroRNA Profiles in HIV Infection. Narla V, Bhakta N, Freedman JE, Tanriverdi K, Maka K, Deeks SG, Ganz P, Hsue P Journal of acquired immune deficiency syndromes (1999) 30204717 J Acquir Immune Defic Syndr 2018 Dec 15
The role of platelets in mediating a response to human influenza infection. Koupenova M, Corkrey HA, Vitseva O, Manni G, Pang CJ, Clancy L, Yao C, Rade J, Levy D, Wang JP, Finberg RW, Kurt-Jones EA, Freedman JE Nature communications 30992428 Nat Commun 2019 Apr 16
Comparison of On-Site Versus Remote Mobile Device Support in the Framingham Heart Study Using the Health eHeart Study for Digital Follow-up: Randomized Pilot Study Set Within an Observational Study Design. Spartano NL, Lin H, Sun F, Lunetta KL, Trinquart L, Valentino M, Manders ES, Pletcher MJ, Marcus GM, McManus DD, Benjamin EJ, Fox CS, Olgin JE, Murabito JM JMIR mHealth and uHealth 31573928 JMIR Mhealth Uhealth 2019 Sep 30
The association of non-alcoholic fatty liver disease and cardiac structure and function-Framingham Heart Study. Chiu LS, Pedley A, Massaro JM, Benjamin EJ, Mitchell GF, McManus DD, Aragam J, Vasan RS, Cheng S, Long MT Liver international : official journal of the International Association for the Study of the Liver 32654390 Liver Int 2020 Oct
Bioimpedance-Based Heart Failure Deterioration Prediction Using a Prototype Fluid Accumulation Vest-Mobile Phone Dyad: An Observational Study. Darling CE, Dovancescu S, Saczynski JS, Riistama J, Sert Kuniyoshi F, Rock J, Meyer TE, McManus DD JMIR cardio 31758769 JMIR Cardio 2017 Mar 13
MicroRNA Signature of Cigarette Smoking and Evidence for a Putative Causal Role of MicroRNAs in Smoking-Related Inflammation and Target Organ Damage. Willinger CM, Rong J, Tanriverdi K, Courchesne PL, Huan T, Wasserman GA, Lin H, Dupuis J, Joehanes R, Jones MR, Chen G, Benjamin EJ, O'Connor GT, Mizgerd JP, Freedman JE, Larson MG, Levy D Circulation. Cardiovascular genetics 29030400 Circ Cardiovasc Genet 2017 Oct
Reliability of Predicting Early Hospital Readmission After Discharge for an Acute Coronary Syndrome Using Claims-Based Data. McManus DD, Saczynski JS, Lessard D, Waring ME, Allison J, Parish DC, Goldberg RJ, Ash A, Kiefe CI, TRACE-CORE Investigators The American journal of cardiology 26718235 Am J Cardiol 2016 Feb 15
RAHI-SATHI Indo-U.S. Collaboration: The Evolution of a Trainee-Led Twinning Model in Global Health Into a Multidisciplinary Collaborative Program. Soni A, Fahey N, Jaffe A, Raithatha S, Raithatha N, Prabhakaran A, Moore Simas TA, Byatt N, Vankar J, Chin M, Phatak AG, Srivastava S, McManus DD, O'Keefe E, Patel H, Patel N, Patel D, Tracey M, Khubchandani JA, Newman H, Earon A, Rosenfield H, Handorf A, Novak B, Bostrom J, Deb A, Desai S, Patel D, Nimbalkar A, Talati K, Rosal M, McQuilkin P, Pandya H, Santry HP, Thanvi S, Kharod U, Fischer M, Allison J, Nimbalkar SM Global health, science and practice 28351882 Glob Health Sci Pract 2017 Mar 24
Relation of Atrial Fibrillation in Acute Myocardial Infarction to In-Hospital Complications and Early Hospital Readmission. Kundu A, O'Day K, Shaikh AY, Lessard DM, Saczynski JS, Yarzebski J, Darling CE, Thabet R, Akhter MW, Floyd KC, Goldberg RJ, McManus DD The American journal of cardiology 26874548 Am J Cardiol 2016 Apr 15
Accuracy and Usability of a Novel Algorithm for Detection of Irregular Pulse Using a Smartwatch Among Older Adults: Observational Study. Ding EY, Han D, Whitcomb C, Bashar SK, Adaramola O, Soni A, Saczynski J, Fitzgibbons TP, Moonis M, Lubitz SA, Lessard D, Hills MT, Barton B, Chon K, McManus DD JMIR cardio 31758787 JMIR Cardio 2019 May 15
Association of Left Atrial Function Index with Atrial Fibrillation and Cardiovascular Disease: The Framingham Offspring Study. Sardana M, Lessard D, Tsao CW, Parikh NI, Barton BA, Nah G, Thomas RC, Cheng S, Schiller NB, Aragam JR, Mitchell GF, Vaze A, Benjamin EJ, Vasan RS, McManus DD Journal of the American Heart Association 29602764 J Am Heart Assoc 2018 Mar 30
Pollen-derived RNAs Are Found in the Human Circulation. Koupenova M, Mick E, Corkrey HA, Singh A, Tanriverdi SE, Vitseva O, Levy D, Keeler AM, Ezzaty Mirhashemi M, ElMallah MK, Gerstein M, Rozowsky J, Tanriverdi K, Freedman JE iScience 31518900 iScience 2019 Sep 27
New paradigms in thrombosis: novel mediators and biomarkers platelet RNA transfer. Clancy L, Freedman JE Journal of thrombosis and thrombolysis 24163053 J Thromb Thrombolysis 2014 Jan
Interleukin 1 receptor 1 and interleukin 1β regulate megakaryocyte maturation, platelet activation, and transcript profile during inflammation in mice and humans. Beaulieu LM, Lin E, Mick E, Koupenova M, Weinberg EO, Kramer CD, Genco CA, Tanriverdi K, Larson MG, Benjamin EJ, Freedman JE Arteriosclerosis, thrombosis, and vascular biology 24458711 Arterioscler Thromb Vasc Biol 2014 Mar
Translational Epidemiology: Entering a Brave New World of Team Science. Shah R, Pico AR, Freedman JE Circulation research 27789584 Circ Res 2016 Oct 28
Atrial fibrillation, cognition and dementia: A review. Aldrugh S, Sardana M, Henninger N, Saczynski JS, McManus DD Journal of cardiovascular electrophysiology 28569383 J Cardiovasc Electrophysiol 2017 Aug
Stroke and Circulating Extracellular RNAs. Mick E, Shah R, Tanriverdi K, Murthy V, Gerstein M, Rozowsky J, Kitchen R, Larson MG, Levy D, Freedman JE Stroke 28289238 Stroke 2017 Apr
Messenger RNA and MicroRNA transcriptomic signatures of cardiometabolic risk factors. McManus DD, Rong J, Huan T, Lacey S, Tanriverdi K, Munson PJ, Larson MG, Joehanes R, Murthy V, Shah R, Freedman JE, Levy D BMC genomics 28178938 BMC Genomics 2017 Feb 8
Yersinia pestis escapes entrapment in thrombi by targeting platelet function. Palace SG, Vitseva O, Proulx MK, Freedman JE, Goguen JD, Koupenova M Journal of thrombosis and haemostasis : JTH 33470041 J Thromb Haemost 2020 Dec
Lifetime risk of atrial fibrillation according to optimal, borderline, or elevated levels of risk factors: cohort study based on longitudinal data from the Framingham Heart Study. Staerk L, Wang B, Preis SR, Larson MG, Lubitz SA, Ellinor PT, McManus DD, Ko D, Weng LC, Lunetta KL, Frost L, Benjamin EJ, Trinquart L BMJ (Clinical research ed.) 29699974 BMJ 2018 Apr 26
Micro RNAs from DNA Viruses are Found Widely in Plasma in a Large Observational Human Population. Koupenova M, Mick E, Corkrey HA, Huan T, Clancy L, Shah R, Benjamin EJ, Levy D, Kurt-Jones EA, Tanriverdi K, Freedman JE Scientific reports 29686252 Sci Rep 2018 Apr 23
Proteomics Profiling and Risk of New-Onset Atrial Fibrillation: Framingham Heart Study. Ko D, Benson MD, Ngo D, Yang Q, Larson MG, Wang TJ, Trinquart L, McManus DD, Lubitz SA, Ellinor PT, Vasan RS, Gerszten RE, Benjamin EJ, Lin H Journal of the American Heart Association 30841775 J Am Heart Assoc 2019 Mar 19
Association of Left Atrial Function Index With Late Atrial Fibrillation Recurrence after Catheter Ablation. Sardana M, Ogunsua AA, Spring M, Shaikh A, Asamoah O, Stokken G, Browning C, Ennis C, Donahue JK, Rosenthal LS, Floyd KC, Aurigemma GP, Parikh NI, McManus DD Journal of cardiovascular electrophysiology 27569695 J Cardiovasc Electrophysiol 2016 Dec
Comparison of RNA isolation and associated methods for extracellular RNA detection by high-throughput quantitative polymerase chain reaction. Tanriverdi K, Kucukural A, Mikhalev E, Tanriverdi SE, Lee R, Ambros VR, Freedman JE Analytical biochemistry 26969789 Anal Biochem 2016 May 15
Atrial Fibrillation Is Associated With a Worse 90-Day Outcome Than Other Cardioembolic Stroke Subtypes. Henninger N, Goddeau RP Jr, Karmarkar A, Helenius J, McManus DD Stroke 27217503 Stroke 2016 Jun
What are exosomes and how can they be used in multiple sclerosis therapy? Pusic AD, Pusic KM, Kraig RP Expert review of neurotherapeutics 24552578 Expert Rev Neurother 2014 Apr
Environmental Enrichment and Its Benefits for Migraine: Dendritic Cell Extracellular Vesicles as an Effective Mimetic. Pusic KM, Won L, Kraig RP, Pusic AD Journal of cellular immunology 34337600 J Cell Immunol 2021
Intranasally administered IGF-1 inhibits spreading depression in vivo. Grinberg YY, Zitzow LA, Kraig RP Brain research 28951235 Brain Res 2017 Dec 15
Environmental Enrichment Stimulates Immune Cell Secretion of Exosomes that Promote CNS Myelination and May Regulate Inflammation. Pusic KM, Pusic AD, Kraig RP Cellular and molecular neurobiology 26993508 Cell Mol Neurobiol 2016 Apr
Spreading depression transiently disrupts myelin via interferon-gamma signaling. Pusic AD, Mitchell HM, Kunkler PE, Klauer N, Kraig RP Experimental neurology 25500111 Exp Neurol 2015 Feb
NIH workshop report on the trans-agency blood-brain interface workshop 2016: exploring key challenges and opportunities associated with the blood, brain and their interface. Ochocinska MJ, Zlokovic BV, Searson PC, Crowder AT, Kraig RP, Ljubimova JY, Mainprize TG, Banks WA, Warren RQ, Kindzelski A, Timmer W, Liu CH Fluids and barriers of the CNS 28457227 Fluids Barriers CNS 2017 May 1
IFNγ-stimulated dendritic cell exosomes as a potential therapeutic for remyelination. Pusic AD, Pusic KM, Clayton BL, Kraig RP Journal of neuroimmunology 24275061 J Neuroimmunol 2014 Jan 15
IFNγ-Stimulated Dendritic Cell Exosomes for Treatment of Migraine Modeled Using Spreading Depression. Pusic KM, Won L, Kraig RP, Pusic AD Frontiers in neuroscience 31551696 Front Neurosci 2019
Spreading depression requires microglia and is decreased by their M2a polarization from environmental enrichment. Pusic KM, Pusic AD, Kemme J, Kraig RP Glia 24723305 Glia 2014 Jul
Youth and environmental enrichment generate serum exosomes containing miR-219 that promote CNS myelination. Pusic AD, Kraig RP Glia 24339157 Glia 2014 Feb
Phasic Treatment with Interferon Gamma Stimulates Release of Exosomes that Protect Against Spreading Depression. Pusic AD, Kraig RP Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research 26083947 J Interferon Cytokine Res 2015 Oct
IFNγ-stimulated dendritic cell extracellular vesicles can be nasally administered to the brain and enter oligodendrocytes. Pusic KM, Kraig RP, Pusic AD PloS one 34388189 PLoS One 2021
Achieving the Promise of Therapeutic Extracellular Vesicles: The Devil is in Details of Therapeutic Loading. Sutaria DS, Badawi M, Phelps MA, Schmittgen TD Pharmaceutical research 28315083 Pharm Res 2017 May
Low active loading of cargo into engineered extracellular vesicles results in inefficient miRNA mimic delivery. Sutaria DS, Jiang J, Elgamal OA, Pomeroy SM, Badawi M, Zhu X, Pavlovicz R, Azevedo-Pouly ACP, Chalmers J, Li C, Phelps MA, Schmittgen TD Journal of extracellular vesicles 28717424 J Extracell Vesicles 2017
Analyzing the miRNA content of extracellular vesicles by fluorescence nanoparticle tracking. Baldwin S, Deighan C, Bandeira E, Kwak KJ, Rahman M, Nana-Sinkam P, Lee LJ, Paulaitis ME Nanomedicine : nanotechnology, biology, and medicine 27989853 Nanomedicine 2017 Feb
Breast Cancer-Specific miR Signature Unique to Extracellular Vesicles Includes "microRNA-like" tRNA Fragments. Guzman N, Agarwal K, Asthagiri D, Yu L, Saji M, Ringel MD, Paulaitis ME Molecular cancer research : MCR 25722304 Mol Cancer Res 2015 May
In vitro immunotoxicity assessment of culture-derived extracellular vesicles in human monocytes. Rosas LE, Elgamal OA, Mo X, Phelps MA, Schmittgen TD, Papenfuss TL Journal of immunotoxicology 27075513 J Immunotoxicol 2016 Sep
CD44 positive and sorafenib insensitive hepatocellular carcinomas respond to the ATP-competitive mTOR inhibitor INK128. Badawi M, Kim J, Dauki A, Sutaria D, Motiwala T, Reyes R, Wani N, Kolli S, Jiang J, Coss CC, Jacob ST, Phelps MA, Schmittgen TD Oncotarget 29899840 Oncotarget 2018 May 25
Exosomal miRNA Cargo as Mediator of Immune Escape Mechanisms in Neuroblastoma. Schmittgen TD Cancer research 30936073 Cancer Res 2019 Apr 1
Comprehensive toxicity and immunogenicity studies reveal minimal effects in mice following sustained dosing of extracellular vesicles derived from HEK293T cells. Zhu X, Badawi M, Pomeroy S, Sutaria DS, Xie Z, Baek A, Jiang J, Elgamal OA, Mo X, Perle K, Chalmers J, Schmittgen TD, Phelps MA Journal of extracellular vesicles 28717420 J Extracell Vesicles 2017
Analysis of exosome release as a cellular response to MAPK pathway inhibition. Agarwal K, Saji M, Lazaroff SM, Palmer AF, Ringel MD, Paulaitis ME Langmuir : the ACS journal of surfaces and colloids 25915504 Langmuir 2015 May 19
Extending gene ontology in the context of extracellular RNA and vesicle communication. Cheung KH, Keerthikumar S, Roncaglia P, Subramanian SL, Roth ME, Samuel M, Anand S, Gangoda L, Gould S, Alexander R, Galas D, Gerstein MB, Hill AF, Kitchen RR, Lötvall J, Patel T, Procaccini DC, Quesenberry P, Rozowsky J, Raffai RL, Shypitsyna A, Su AI, Théry C, Vickers K, Wauben MH, Mathivanan S, Milosavljevic A, Laurent LC Journal of biomedical semantics 27076901 J Biomed Semantics 2016
Comparison of Reproducibility, Accuracy, Sensitivity, and Specificity of miRNA Quantification Platforms. Godoy PM, Barczak AJ, DeHoff P, Srinivasan S, Etheridge A, Galas D, Das S, Erle DJ, Laurent LC Cell reports 31851944 Cell Rep 2019 Dec 17
Comprehensive multi-center assessment of small RNA-seq methods for quantitative miRNA profiling. Giraldez MD, Spengler RM, Etheridge A, Godoy PM, Barczak AJ, Srinivasan S, De Hoff PL, Tanriverdi K, Courtright A, Lu S, Khoory J, Rubio R, Baxter D, Driedonks TAP, Buermans HPJ, Nolte-'t Hoen ENM, Jiang H, Wang K, Ghiran I, Wang YE, Van Keuren-Jensen K, Freedman JE, Woodruff PG, Laurent LC, Erle DJ, Galas DJ, Tewari M Nature biotechnology 30010675 Nat Biotechnol 2018 Sep
Discovery and Verification of Extracellular miRNA Biomarkers for Non-invasive Prediction of Pre-eclampsia in Asymptomatic Women. Srinivasan S, Treacy R, Herrero T, Olsen R, Leonardo TR, Zhang X, DeHoff P, To C, Poling LG, Fernando A, Leon-Garcia S, Knepper K, Tran V, Meads M, Tasarz J, Vuppala A, Park S, Laurent CD, Bui T, Cheah PS, Overcash RT, Ramos GA, Roeder H, Ghiran I, Parast M, PAPR Study Consortium, Breakefield XO, Lueth AJ, Rust SR, Dufford MT, Fox AC, Hickok DE, Burchard J, Boniface JJ, Laurent LC Cell reports. Medicine 32864636 Cell Rep Med 2020 May 19
Getting off the ground state: X chromosome inactivation knocks down barriers to differentiation. Morey R, Laurent LC Cell stem cell 24506876 Cell Stem Cell 2014 Feb 6
Miniaturization Technologies for Efficient Single-Cell Library Preparation for Next-Generation Sequencing. Mora-Castilla S, To C, Vaezeslami S, Morey R, Srinivasan S, Chousal JN, Cook-Andersen H, Jenkins J, Laurent LC Journal of laboratory automation 26891732 J Lab Autom 2016 Aug
Extracellular vesicles: roles in gamete maturation, fertilization and embryo implantation. Machtinger R, Laurent LC, Baccarelli AA Human reproduction update 26663221 Hum Reprod Update 2016 Mar-Apr
Discovery and verification of extracellular microRNA biomarkers for diagnostic and prognostic assessment of preeclampsia at triage. Morey R, Poling L, Srinivasan S, Martinez-King C, Anyikam A, Zhang-Rutledge K, To C, Hakim A, Mochizuki M, Verma K, Mason A, Tran V, Meads M, Lamale-Smith L, Roeder H, Horii M, Ramos GA, DeHoff P, Parast MM, Pantham P, Laurent LC Science advances 38117879 Sci Adv 2023 Dec 22
APOE, MAPT, and SNCA genes and cognitive performance in Parkinson disease. Mata IF, Leverenz JB, Weintraub D, Trojanowski JQ, Hurtig HI, Van Deerlin VM, Ritz B, Rausch R, Rhodes SL, Factor SA, Wood-Siverio C, Quinn JF, Chung KA, Peterson AL, Espay AJ, Revilla FJ, Devoto J, Hu SC, Cholerton BA, Wan JY, Montine TJ, Edwards KL, Zabetian CP JAMA neurology 25178429 JAMA Neurol 2014 Nov
Lost in Translation? Finding Our Way To Effective Alzheimer's Disease Therapies. Quinn JF Journal of Alzheimer's disease : JAD 29758942 J Alzheimers Dis 2018
Validation of MicroRNA Biomarkers for Alzheimer's Disease in Human Cerebrospinal Fluid. Wiedrick JT, Phillips JI, Lusardi TA, McFarland TJ, Lind B, Sandau US, Harrington CA, Lapidus JA, Galasko DR, Quinn JF, Saugstad JA Journal of Alzheimer's disease : JAD 30689565 J Alzheimers Dis 2019
Performance of Validated MicroRNA Biomarkers for Alzheimer's Disease in Mild Cognitive Impairment. Sandau US, Wiedrick JT, Smith SJ, McFarland TJ, Lusardi TA, Lind B, Harrington CA, Lapidus JA, Galasko DR, Quinn JF, Saugstad JA Journal of Alzheimer's disease : JAD 32955460 J Alzheimers Dis 2020
MicroRNAs in Human Cerebrospinal Fluid as Biomarkers for Alzheimer's Disease. Lusardi TA, Phillips JI, Wiedrick JT, Harrington CA, Lind B, Lapidus JA, Quinn JF, Saugstad JA Journal of Alzheimer's disease : JAD 27814298 J Alzheimers Dis 2017
Evaluation of mild cognitive impairment subtypes in Parkinson's disease. Cholerton BA, Zabetian CP, Wan JY, Montine TJ, Quinn JF, Mata IF, Chung KA, Peterson A, Espay AJ, Revilla FJ, Devoto J, Watson GS, Hu SC, Leverenz JB, Edwards KL Movement disorders : official journal of the Movement Disorder Society 24710804 Mov Disord 2014 May
Analytics of Cerebrospinal Fluid MicroRNA Quantitative PCR Studies. Lusardi TA, Wiedrick JT, Malone M, Phillips JI, Sandau US, Lind B, Quinn JF, Lapidus JA, Saugstad JA Molecular neurobiology 30430409 Mol Neurobiol 2019 Jul
CNOB/ChrR6, a new prodrug enzyme cancer chemotherapy. Thorne SH, Barak Y, Liang W, Bachmann MH, Rao J, Contag CH, Matin A Molecular cancer therapeutics 19190118 Mol Cancer Ther 2009 Feb
Differential fates of biomolecules delivered to target cells via extracellular vesicles. Kanada M, Bachmann MH, Hardy JW, Frimannson DO, Bronsart L, Wang A, Sylvester MD, Schmidt TL, Kaspar RL, Butte MJ, Matin AC, Contag CH Proceedings of the National Academy of Sciences of the United States of America 25713383 Proc Natl Acad Sci U S A 2015 Mar 24
Anti-HER2 scFv-Directed Extracellular Vesicle-Mediated mRNA-Based Gene Delivery Inhibits Growth of HER2-Positive Human Breast Tumor Xenografts by Prodrug Activation. Wang JH, Forterre AV, Zhao J, Frimannsson DO, Delcayre A, Antes TJ, Efron B, Jeffrey SS, Pegram MD, Matin AC Molecular cancer therapeutics 29483213 Mol Cancer Ther 2018 May
Extracellular Vesicle-Mediated In Vitro Transcribed mRNA Delivery for Treatment of HER2(+) Breast Cancer Xenografts in Mice by Prodrug CB1954 without General Toxicity. Forterre AV, Wang JH, Delcayre A, Kim K, Green C, Pegram MD, Jeffrey SS, Matin AC Molecular cancer therapeutics 31941722 Mol Cancer Ther 2020 Mar
Patient-derived xenografts of triple-negative breast cancer reproduce molecular features of patient tumors and respond to mTOR inhibition. Zhang H, Cohen AL, Krishnakumar S, Wapnir IL, Veeriah S, Deng G, Coram MA, Piskun CM, Longacre TA, Herrler M, Frimannsson DO, Telli ML, Dirbas FM, Matin AC, Dairkee SH, Larijani B, Glinsky GV, Bild AH, Jeffrey SS Breast cancer research : BCR 24708766 Breast Cancer Res 2014 Apr 7
Utilizing native fluorescence imaging, modeling and simulation to examine pharmacokinetics and therapeutic regimen of a novel anticancer prodrug. Wang JH, Endsley AN, Green CE, Matin AC BMC cancer 27457630 BMC Cancer 2016 Jul 25
Microvesicle-Mediated Delivery of Minicircle DNA Results in Effective Gene-Directed Enzyme Prodrug Cancer Therapy. Kanada M, Kim BD, Hardy JW, Ronald JA, Bachmann MH, Bernard MP, Perez GI, Zarea AA, Ge TJ, Withrow A, Ibrahim SA, Toomajian V, Gambhir SS, Paulmurugan R, Contag CH Molecular cancer therapeutics 31451563 Mol Cancer Ther 2019 Dec
Exercise-induced circulating extracellular vesicles protect against cardiac ischemia-reperfusion injury. Bei Y, Xu T, Lv D, Yu P, Xu J, Che L, Das A, Tigges J, Toxavidis V, Ghiran I, Shah R, Li Y, Zhang Y, Das S, Xiao J Basic research in cardiology 28534118 Basic Res Cardiol 2017 Jul
Response by Heydari et al to Letter Regarding Article, "Effect of Omega-3 Acid Ethyl Esters on Left Ventricular Remodeling After Acute Myocardial Infarction: The OMEGA-REMODEL Randomized Clinical Trial". Heydari B, Harris WS, Kwong RY Circulation 28069718 Circulation 2017 Jan 10
Obstacles and opportunities in the functional analysis of extracellular vesicle RNA - an ISEV position paper. Mateescu B, Kowal EJ, van Balkom BW, Bartel S, Bhattacharyya SN, Buzás EI, Buck AH, de Candia P, Chow FW, Das S, Driedonks TA, Fernández-Messina L, Haderk F, Hill AF, Jones JC, Van Keuren-Jensen KR, Lai CP, Lässer C, Liegro ID, Lunavat TR, Lorenowicz MJ, Maas SL, Mäger I, Mittelbrunn M, Momma S, Mukherjee K, Nawaz M, Pegtel DM, Pfaffl MW, Schiffelers RM, Tahara H, Théry C, Tosar JP, Wauben MH, Witwer KW, Nolte-'t Hoen EN Journal of extracellular vesicles 28326170 J Extracell Vesicles 2017
Why Don't We Have Proven Treatments for HFpEF? Roh J, Houstis N, Rosenzweig A Circulation research 28408453 Circ Res 2017 Apr 14
Diagnostic Accuracy of Advanced Imaging in Cardiac Sarcoidosis. Divakaran S, Stewart GC, Lakdawala NK, Padera RF, Zhou W, Desai AS, Givertz MM, Mehra MR, Kwong RY, Hedgire SS, Ghoshhajra BB, Taqueti VR, Skali H, Dorbala S, Blankstein R, Di Carli MF Circulation. Cardiovascular imaging 31177817 Circ Cardiovasc Imaging 2019 Jun
CITED4 induces physiologic hypertrophy and promotes functional recovery after ischemic injury. Bezzerides VJ, Platt C, Lerchenmüller C, Paruchuri K, Oh NL, Xiao C, Cao Y, Mann N, Spiegelman BM, Rosenzweig A JCI insight 27430023 JCI Insight 2016 Jun 16
Exercise induces new cardiomyocyte generation in the adult mammalian heart. Vujic A, Lerchenmüller C, Wu TD, Guillermier C, Rabolli CP, Gonzalez E, Senyo SE, Liu X, Guerquin-Kern JL, Steinhauser ML, Lee RT, Rosenzweig A Nature communications 29695718 Nat Commun 2018 Apr 25
Evaluation of commercially available small RNASeq library preparation kits using low input RNA. Yeri A, Courtright A, Danielson K, Hutchins E, Alsop E, Carlson E, Hsieh M, Ziegler O, Das A, Shah RV, Rozowsky J, Das S, Van Keuren-Jensen K BMC genomics 29728066 BMC Genomics 2018 May 5
Angiotensin II-induced muscle atrophy via PPARγ suppression is mediated by miR-29b. Li J, Yang T, Sha Z, Tang H, Hua X, Wang L, Wang Z, Gao Z, Sluijter JPG, Rowe GC, Das S, Yang L, Xiao J Molecular therapy. Nucleic acids 33614226 Mol Ther Nucleic Acids 2021 Mar 5
Response to Letter Regarding Article, "Circulating MicroRNA-30d Is Associated With Response to Cardiac Resynchronization Therapy in Heart Failure and Regulates Cardiomyocyte Apoptosis: A Translational Pilot Study". Melman YF, Shah R, Danielson K, Xiao J, Simonson B, Barth A, Chakir K, Lewis GD, Lavender Z, Truong QA, Kleber A, Das R, Rosenzweig A, Wang Y, Kass D, Singh JP, Das S Circulation 26858296 Circulation 2016 Feb 9
Circulating miR-21, miR-378, and miR-940 increase in response to an acute exhaustive exercise in chronic heart failure patients. Xu T, Zhou Q, Che L, Das S, Wang L, Jiang J, Li G, Xu J, Yao J, Wang H, Dai Y, Xiao J Oncotarget 26799589 Oncotarget 2016 Mar 15
Pathological cardiac remodeling occurs early in CKD mice from unilateral urinary obstruction, and is attenuated by Enalapril. Ham O, Jin W, Lei L, Huang HH, Tsuji K, Huang M, Roh J, Rosenzweig A, Lu HAJ Scientific reports 30382174 Sci Rep 2018 Oct 31
Comparing CMR Mapping Methods and Myocardial Patterns Toward Heart Failure Outcomes in Nonischemic Dilated Cardiomyopathy. Vita T, Gräni C, Abbasi SA, Neilan TG, Rowin E, Kaneko K, Coelho-Filho O, Watanabe E, Mongeon FP, Farhad H, Rassi CH, Choi YL, Cheng K, Givertz MM, Blankstein R, Steigner M, Aghayev A, Jerosch-Herold M, Kwong RY JACC. Cardiovascular imaging 30448130 JACC Cardiovasc Imaging 2019 Aug
Cardiac macrophages promote diastolic dysfunction. Hulsmans M, Sager HB, Roh JD, Valero-Muñoz M, Houstis NE, Iwamoto Y, Sun Y, Wilson RM, Wojtkiewicz G, Tricot B, Osborne MT, Hung J, Vinegoni C, Naxerova K, Sosnovik DE, Zile MR, Bradshaw AD, Liao R, Tawakol A, Weissleder R, Rosenzweig A, Swirski FK, Sam F, Nahrendorf M The Journal of experimental medicine 29339450 J Exp Med 2018 Feb 5
Extracellular Vesicles in Cardiovascular Theranostics. Bei Y, Das S, Rodosthenous RS, Holvoet P, Vanhaverbeke M, Monteiro MC, Monteiro VVS, Radosinska J, Bartekova M, Jansen F, Li Q, Rajasingh J, Xiao J Theranostics 29158817 Theranostics 2017
Small RNA-seq during acute maximal exercise reveal RNAs involved in vascular inflammation and cardiometabolic health: brief report. Shah R, Yeri A, Das A, Courtright-Lim A, Ziegler O, Gervino E, Ocel J, Quintero-Pinzon P, Wooster L, Bailey CS, Tanriverdi K, Beaulieu LM, Freedman JE, Ghiran I, Lewis GD, Van Keuren-Jensen K, Das S American journal of physiology. Heart and circulatory physiology 28916639 Am J Physiol Heart Circ Physiol 2017 Dec 1
Extracellular Vesicles in Heart Disease: Excitement for the Future ? Danielson KM, Das S Exosomes and microvesicles 25429310 Exosomes Microvesicles 2014
What do we know about the cardiac benefits of exercise? Wei X, Liu X, Rosenzweig A Trends in cardiovascular medicine 25661031 Trends Cardiovasc Med 2015 Aug
Cathelicidin-related antimicrobial peptide protects against myocardial ischemia/reperfusion injury. Bei Y, Pan LL, Zhou Q, Zhao C, Xie Y, Wu C, Meng X, Gu H, Xu J, Zhou L, Sluijter JPG, Das S, Agerberth B, Sun J, Xiao J BMC medicine 30782145 BMC Med 2019 Feb 20
A snapshot of genetic and epigenetic basis of arrhythmia and heart failure. Xiao J, Sluijter JP, Das S, Yang Y, Shen Z Frontiers in genetics 25784925 Front Genet 2015
High Throughput Sequencing of Extracellular RNA from Human Plasma. Danielson KM, Rubio R, Abderazzaq F, Das S, Wang YE PloS one 28060806 PLoS One 2017
Crucial Role of miR-433 in Regulating Cardiac Fibrosis. Tao L, Bei Y, Chen P, Lei Z, Fu S, Zhang H, Xu J, Che L, Chen X, Sluijter JP, Das S, Cretoiu D, Xu B, Zhong J, Xiao J, Li X Theranostics 27698941 Theranostics 2016
Circulating miR-30d Predicts Survival in Patients with Acute Heart Failure. Xiao J, Gao R, Bei Y, Zhou Q, Zhou Y, Zhang H, Jin M, Wei S, Wang K, Xu X, Yao W, Xu D, Zhou F, Jiang J, Li X, Das S Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 28214846 Cell Physiol Biochem 2017
Extracellular RNAs Are Associated With Insulin Resistance and Metabolic Phenotypes. Shah R, Murthy V, Pacold M, Danielson K, Tanriverdi K, Larson MG, Hanspers K, Pico A, Mick E, Reis J, de Ferranti S, Freinkman E, Levy D, Hoffmann U, Osganian S, Das S, Freedman JE Diabetes care 28183786 Diabetes Care 2017 Apr
Corrigendum: Diverse human extracellular RNAs are widely detected in human plasma. Freedman JE, Gerstein M, Mick E, Rozowsky J, Levy D, Kitchen R, Das S, Shah R, Danielson K, Beaulieu L, Navarro FC, Wang Y, Galeev TR, Holman A, Kwong RY, Murthy V, Tanriverdi SE, Koupenova M, Mikhalev E, Tanriverdi K Nature communications 27255613 Nat Commun 2016 Jun 3
MicroRNA Therapeutics: the Next Magic Bullet? Simonson B, Das S Mini reviews in medicinal chemistry 25807941 Mini Rev Med Chem 2015
Late gadolinium enhancement among survivors of sudden cardiac arrest. Neilan TG, Farhad H, Mayrhofer T, Shah RV, Dodson JA, Abbasi SA, Danik SB, Verdini DJ, Tokuda M, Tedrow UB, Jerosch-Herold M, Hoffmann U, Ghoshhajra BB, Stevenson WG, Kwong RY JACC. Cardiovascular imaging 25797123 JACC Cardiovasc Imaging 2015 Apr
Circular RNAs as Potential Theranostics in the Cardiovascular System. Bei Y, Yang T, Wang L, Holvoet P, Das S, Sluijter JPG, Monteiro MC, Liu Y, Zhou Q, Xiao J Molecular therapy. Nucleic acids 30368217 Mol Ther Nucleic Acids 2018 Dec 7
Characterization of Cardiac Amyloidosis by Atrial Late Gadolinium Enhancement Using Contrast-Enhanced Cardiac Magnetic Resonance Imaging and Correlation With Left Atrial Conduit and Contractile Function. Kwong RY, Heydari B, Abbasi S, Steel K, Al-Mallah M, Wu H, Falk RH The American journal of cardiology 26076990 Am J Cardiol 2015 Aug 15
Plasma Circulating Extracellular RNAs in Left Ventricular Remodeling Post-Myocardial Infarction. Danielson KM, Shah R, Yeri A, Liu X, Camacho Garcia F, Silverman M, Tanriverdi K, Das A, Xiao C, Jerosch-Herold M, Heydari B, Abbasi S, Van Keuren-Jensen K, Freedman JE, Wang YE, Rosenzweig A, Kwong RY, Das S EBioMedicine 29779700 EBioMedicine 2018 Jun
Diurnal Variations of Circulating Extracellular Vesicles Measured by Nano Flow Cytometry. Danielson KM, Estanislau J, Tigges J, Toxavidis V, Camacho V, Felton EJ, Khoory J, Kreimer S, Ivanov AR, Mantel PY, Jones J, Akuthota P, Das S, Ghiran I PloS one 26745887 PLoS One 2016
miR-29b contributes to multiple types of muscle atrophy. Li J, Chan MC, Yu Y, Bei Y, Chen P, Zhou Q, Cheng L, Chen L, Ziegler O, Rowe GC, Das S, Xiao J Nature communications 28541289 Nat Commun 2017 May 25
miR-222 is necessary for exercise-induced cardiac growth and protects against pathological cardiac remodeling. Liu X, Xiao J, Zhu H, Wei X, Platt C, Damilano F, Xiao C, Bezzerides V, Boström P, Che L, Zhang C, Spiegelman BM, Rosenzweig A Cell metabolism 25863248 Cell Metab 2015 Apr 7
Circulating MicroRNA-30d Is Associated With Response to Cardiac Resynchronization Therapy in Heart Failure and Regulates Cardiomyocyte Apoptosis: A Translational Pilot Study. Melman YF, Shah R, Danielson K, Xiao J, Simonson B, Barth A, Chakir K, Lewis GD, Lavender Z, Truong QA, Kleber A, Das R, Rosenzweig A, Wang Y, Kass D, Singh JP, Das S Circulation 25995320 Circulation 2015 Jun 23
miR-17-3p Contributes to Exercise-Induced Cardiac Growth and Protects against Myocardial Ischemia-Reperfusion Injury. Shi J, Bei Y, Kong X, Liu X, Lei Z, Xu T, Wang H, Xuan Q, Chen P, Xu J, Che L, Liu H, Zhong J, Sluijter JP, Li X, Rosenzweig A, Xiao J Theranostics 28255358 Theranostics 2017
Circulating miRNAs and Risk of Sudden Death in Patients With Coronary Heart Disease. Silverman MG, Yeri A, Moorthy MV, Camacho Garcia F, Chatterjee NA, Glinge CSA, Tfelt-Hansen J, Salvador AM, Pico AR, Shah R, Albert CM, Das S JACC. Clinical electrophysiology 31971908 JACC Clin Electrophysiol 2020 Jan
MicroRNAs Associated With Reverse Left Ventricular Remodeling in Humans Identify Pathways of Heart Failure Progression. Shah R, Ziegler O, Yeri A, Liu X, Murthy V, Rabideau D, Xiao CY, Hanspers K, Belcher A, Tackett M, Rosenzweig A, Pico AR, Januzzi JL, Das S Circulation. Heart failure 29438982 Circ Heart Fail 2018 Feb
Activin type II receptor signaling in cardiac aging and heart failure. Roh JD, Hobson R, Chaudhari V, Quintero P, Yeri A, Benson M, Xiao C, Zlotoff D, Bezzerides V, Houstis N, Platt C, Damilano F, Lindman BR, Elmariah S, Biersmith M, Lee SJ, Seidman CE, Seidman JG, Gerszten RE, Lach-Trifilieff E, Glass DJ, Rosenzweig A Science translational medicine 30842316 Sci Transl Med 2019 Mar 6
Comparison of myocardial fibrosis quantification methods by cardiovascular magnetic resonance imaging for risk stratification of patients with suspected myocarditis. Gräni C, Eichhorn C, Bière L, Kaneko K, Murthy VL, Agarwal V, Aghayev A, Steigner M, Blankstein R, Jerosch-Herold M, Kwong RY Journal of cardiovascular magnetic resonance : official journal of the Society for Cardiovascular Magnetic Resonance 30813942 J Cardiovasc Magn Reson 2019 Feb 28
miRNA Signatures of Insulin Resistance in Obesity. Jones A, Danielson KM, Benton MC, Ziegler O, Shah R, Stubbs RS, Das S, Macartney-Coxson D Obesity (Silver Spring, Md.) 28834285 Obesity (Silver Spring) 2017 Oct
miR-31a-5p promotes postnatal cardiomyocyte proliferation by targeting RhoBTB1. Xiao J, Liu H, Cretoiu D, Toader DO, Suciu N, Shi J, Shen S, Bei Y, Sluijter JP, Das S, Kong X, Li X Experimental & molecular medicine 29053138 Exp Mol Med 2017 Oct 20
Biomarker of Collagen Turnover (C-Terminal Telopeptide) and Prognosis in Patients With Non- ST -Elevation Acute Coronary Syndromes. Zelniker TA, Jarolim P, Scirica BM, Braunwald E, Park JG, Das S, Sabatine MS, Morrow DA Journal of the American Heart Association 31020897 J Am Heart Assoc 2019 May 7
Plant-Derived Exosomal MicroRNAs Shape the Gut Microbiota. Teng Y, Ren Y, Sayed M, Hu X, Lei C, Kumar A, Hutchins E, Mu J, Deng Z, Luo C, Sundaram K, Sriwastva MK, Zhang L, Hsieh M, Reiman R, Haribabu B, Yan J, Jala VR, Miller DM, Van Keuren-Jensen K, Merchant ML, McClain CJ, Park JW, Egilmez NK, Zhang HG Cell host & microbe 30449315 Cell Host Microbe 2018 Nov 14
Rare Variants in Cardiomyopathy Genes Associated With Stress-Induced Cardiomyopathy. Kalani MY, Siniard AL, Corneveaux JJ, Bruhns R, Richholt R, Forseth J, Zabramski JM, Nakaji P, Spetzler RF, Huentelman MJ Neurosurgery 26606670 Neurosurgery 2016 Jun
Extracellular circular RNA profiles in plasma and urine of healthy, male college athletes. Hutchins E, Reiman R, Winarta J, Beecroft T, Richholt R, De Both M, Shahbander K, Carlson E, Janss A, Siniard A, Balak C, Bruhns R, Whitsett TG, McCoy R, Anastasi M, Allen A, Churas B, Huentelman M, Van Keuren-Jensen K Scientific data 34711851 Sci Data 2021 Oct 28
Intraarterial Transplantation of Mitochondria After Ischemic Stroke Reduces Cerebral Infarction. Norat P, Sokolowski JD, Gorick CM, Soldozy S, Kumar JS, Chae Y, Yagmurlu K, Nilak J, Sharifi KA, Walker M, Levitt MR, Klibanov AL, Yan Z, Price RJ, Tvrdik P, Kalani MYS Stroke (Hoboken, N.J.) 37545759 Stroke Vasc Interv Neurol 2023 May
Revascularization and aneurysm surgery: techniques, indications, and outcomes in the endovascular era. Kalani MY, Ramey W, Albuquerque FC, McDougall CG, Nakaji P, Zabramski JM, Spetzler RF Neurosurgery 24521611 Neurosurgery 2014 May
Total Extracellular Small RNA Profiles from Plasma, Saliva, and Urine of Healthy Subjects. Yeri A, Courtright A, Reiman R, Carlson E, Beecroft T, Janss A, Siniard A, Richholt R, Balak C, Rozowsky J, Kitchen R, Hutchins E, Winarta J, McCoy R, Anastasi M, Kim S, Huentelman M, Van Keuren-Jensen K Scientific reports 28303895 Sci Rep 2017 Mar 17
Small RNA Changes in Plasma Have Potential for Early Diagnosis of Alzheimer's Disease before Symptom Onset. Palade J, Alsop E, Courtright-Lim A, Hsieh M, Whitsett TG, Galasko D, Van Keuren-Jensen K Cells 38334599 Cells 2024 Jan 23
Isolation, identification, and characterization of novel nanovesicles. Zhang HG, Cao P, Teng Y, Hu X, Wang Q, Yeri AS, Zhuang X, Samykutty A, Mu J, Deng ZB, Zhang L, Mobley JA, Yan J, Van Keuren-Jensen K, Miller D Oncotarget 27191656 Oncotarget 2016 Jul 5
Translating RNA sequencing into clinical diagnostics: opportunities and challenges. Byron SA, Van Keuren-Jensen KR, Engelthaler DM, Carpten JD, Craig DW Nature reviews. Genetics 26996076 Nat Rev Genet 2016 May
Extracellular microRNA 3' end modification across diverse body fluids. Koyano K, Bahn JH, Xiao X Epigenetics 33092484 Epigenetics 2021 Sep
Identification of MS-specific serum miRNAs in an international multicenter study. Regev K, Healy BC, Paul A, Diaz-Cruz C, Mazzola MA, Raheja R, Glanz BI, Kivisäkk P, Chitnis T, Jagodic M, Piehl F, Olsson T, Khademi M, Hauser S, Oksenberg J, Khoury SJ, Weiner HL, Gandhi R Neurology(R) neuroimmunology & neuroinflammation 30175165 Neurol Neuroimmunol Neuroinflamm 2018 Sep
Association Between Serum MicroRNAs and Magnetic Resonance Imaging Measures of Multiple Sclerosis Severity. Regev K, Healy BC, Khalid F, Paul A, Chu R, Tauhid S, Tummala S, Diaz-Cruz C, Raheja R, Mazzola MA, von Glehn F, Kivisakk P, Dupuy SL, Kim G, Chitnis T, Weiner HL, Gandhi R, Bakshi R JAMA neurology 28114622 JAMA Neurol 2017 Mar 1
Multiple Sclerosis: Mechanisms and Immunotherapy. Baecher-Allan C, Kaskow BJ, Weiner HL Neuron 29470968 Neuron 2018 Feb 21
Comprehensive evaluation of serum microRNAs as biomarkers in multiple sclerosis. Regev K, Paul A, Healy B, von Glenn F, Diaz-Cruz C, Gholipour T, Mazzola MA, Raheja R, Nejad P, Glanz BI, Kivisakk P, Chitnis T, Weiner HL, Gandhi R Neurology(R) neuroimmunology & neuroinflammation 27606352 Neurol Neuroimmunol Neuroinflamm 2016 Oct
Correlating serum micrornas and clinical parameters in amyotrophic lateral sclerosis. Raheja R, Regev K, Healy BC, Mazzola MA, Beynon V, Von Glehn F, Paul A, Diaz-Cruz C, Gholipour T, Glanz BI, Kivisakk P, Chitnis T, Weiner HL, Berry JD, Gandhi R Muscle & nerve 29466830 Muscle Nerve 2018 Aug
A High-Throughput Method for Direct Detection of Therapeutic Oligonucleotide-Induced Gene Silencing In Vivo. Coles AH, Osborn MF, Alterman JF, Turanov AA, Godinho BM, Kennington L, Chase K, Aronin N, Khvorova A Nucleic acid therapeutics 26595721 Nucleic Acid Ther 2016 Apr
Nucleic Acid Therapeutics for Neurological Diseases. Watts JK, Brown RH, Khvorova A Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics 31037650 Neurotherapeutics 2019 Apr
Serum Deprivation of Mesenchymal Stem Cells Improves Exosome Activity and Alters Lipid and Protein Composition. Haraszti RA, Miller R, Dubuke ML, Rockwell HE, Coles AH, Sapp E, Didiot MC, Echeverria D, Stoppato M, Sere YY, Leszyk J, Alterman JF, Godinho BMDC, Hassler MR, McDaniel J, Narain NR, Wollacott R, Wang Y, Shaffer SA, Kiebish MA, DiFiglia M, Aronin N, Khvorova A iScience 31195240 iScience 2019 Jun 28
Loading of Extracellular Vesicles with Hydrophobically Modified siRNAs. Didiot MC, Haraszti RA, Aronin N, Khvorova A Methods in molecular biology (Clifton, N.J.) 29388146 Methods Mol Biol 2018
High-resolution proteomic and lipidomic analysis of exosomes and microvesicles from different cell sources. Haraszti RA, Didiot MC, Sapp E, Leszyk J, Shaffer SA, Rockwell HE, Gao F, Narain NR, DiFiglia M, Kiebish MA, Aronin N, Khvorova A Journal of extracellular vesicles 27863537 J Extracell Vesicles 2016
Loading of Extracellular Vesicles with Chemically Stabilized Hydrophobic siRNAs for the Treatment of Disease in the Central Nervous System. Haraszti RA, Coles A, Aronin N, Khvorova A, Didiot MC Bio-protocol 28868334 Bio Protoc 2017 Jun 20
Exosome-mediated Delivery of Hydrophobically Modified siRNA for Huntingtin mRNA Silencing. Didiot MC, Hall LM, Coles AH, Haraszti RA, Godinho BM, Chase K, Sapp E, Ly S, Alterman JF, Hassler MR, Echeverria D, Raj L, Morrissey DV, DiFiglia M, Aronin N, Khvorova A Molecular therapy : the journal of the American Society of Gene Therapy 27506293 Mol Ther 2016 Oct
Hydrophobicity of Lipid-Conjugated siRNAs Predicts Productive Loading to Small Extracellular Vesicles. Biscans A, Haraszti RA, Echeverria D, Miller R, Didiot MC, Nikan M, Roux L, Aronin N, Khvorova A Molecular therapy : the journal of the American Society of Gene Therapy 29699940 Mol Ther 2018 Jun 6
Hydrophobically Modified siRNAs Silence Huntingtin mRNA in Primary Neurons and Mouse Brain. Alterman JF, Hall LM, Coles AH, Hassler MR, Didiot MC, Chase K, Abraham J, Sottosanti E, Johnson E, Sapp E, Osborn MF, Difiglia M, Aronin N, Khvorova A Molecular therapy. Nucleic acids 26623938 Mol Ther Nucleic Acids 2015 Dec 1
Optimized Cholesterol-siRNA Chemistry Improves Productive Loading onto Extracellular Vesicles. Haraszti RA, Miller R, Didiot MC, Biscans A, Alterman JF, Hassler MR, Roux L, Echeverria D, Sapp E, DiFiglia M, Aronin N, Khvorova A Molecular therapy : the journal of the American Society of Gene Therapy 29937418 Mol Ther 2018 Aug 1
A High-throughput Assay for mRNA Silencing in Primary Cortical Neurons in vitro with Oligonucleotide Therapeutics. Alterman JF, Coles AH, Hall LM, Aronin N, Khvorova A, Didiot MC Bio-protocol 28966945 Bio Protoc 2017 Aug 20
Synthesis and Evaluation of Parenchymal Retention and Efficacy of a Metabolically Stable O-Phosphocholine-N-docosahexaenoyl-l-serine siRNA Conjugate in Mouse Brain. Nikan M, Osborn MF, Coles AH, Biscans A, Godinho BMDC, Haraszti RA, Sapp E, Echeverria D, DiFiglia M, Aronin N, Khvorova A Bioconjugate chemistry 28462988 Bioconjug Chem 2017 Jun 21
The chemical evolution of oligonucleotide therapies of clinical utility. Khvorova A, Watts JK Nature biotechnology 28244990 Nat Biotechnol 2017 Mar
Noncoding RNA as therapeutic targets for hepatocellular carcinoma. George J, Patel T Seminars in liver disease 25632936 Semin Liver Dis 2015 Feb
Extracellular Vesicle-Based Therapeutic Targeting of β-Catenin to Modulate Anticancer Immune Responses in Hepatocellular Cancer. Matsuda A, Ishiguro K, Yan IK, Patel T Hepatology communications 30976743 Hepatol Commun 2019 Apr
Extracellular vesicle long noncoding RNA as potential biomarkers of liver cancer. Mohankumar S, Patel T Briefings in functional genomics 26634812 Brief Funct Genomics 2016 May
Circulating Extracellular RNA Markers of Liver Regeneration. Yan IK, Wang X, Asmann YW, Haga H, Patel T PloS one 27415797 PLoS One 2016
EVpedia: a community web portal for extracellular vesicles research. Kim DK, Lee J, Kim SR, Choi DS, Yoon YJ, Kim JH, Go G, Nhung D, Hong K, Jang SC, Kim SH, Park KS, Kim OY, Park HT, Seo JH, Aikawa E, Baj-Krzyworzeka M, van Balkom BW, Belting M, Blanc L, Bond V, Bongiovanni A, Borràs FE, Buée L, Buzás EI, Cheng L, Clayton A, Cocucci E, Dela Cruz CS, Desiderio DM, Di Vizio D, Ekström K, Falcon-Perez JM, Gardiner C, Giebel B, Greening DW, Gross JC, Gupta D, Hendrix A, Hill AF, Hill MM, Nolte-'t Hoen E, Hwang DW, Inal J, Jagannadham MV, Jayachandran M, Jee YK, Jørgensen M, Kim KP, Kim YK, Kislinger T, Lässer C, Lee DS, Lee H, van Leeuwen J, Lener T, Liu ML, Lötvall J, Marcilla A, Mathivanan S, Möller A, Morhayim J, Mullier F, Nazarenko I, Nieuwland R, Nunes DN, Pang K, Park J, Patel T, Pocsfalvi G, Del Portillo H, Putz U, Ramirez MI, Rodrigues ML, Roh TY, Royo F, Sahoo S, Schiffelers R, Sharma S, Siljander P, Simpson RJ, Soekmadji C, Stahl P, Stensballe A, Stępień E, Tahara H, Trummer A, Valadi H, Vella LJ, Wai SN, Witwer K, Yáñez-Mó M, Youn H, Zeidler R, Gho YS Bioinformatics (Oxford, England) 25388151 Bioinformatics 2015 Mar 15
Involvement of extracellular vesicle long noncoding RNA (linc-VLDLR) in tumor cell responses to chemotherapy. Takahashi K, Yan IK, Wood J, Haga H, Patel T Molecular cancer research : MCR 24874432 Mol Cancer Res 2014 Oct
Extracellular vesicle noncoding RNA: new players in the diagnosis and pathogenesis of cholangiocarcinoma. Patel T Hepatology (Baltimore, Md.) 24753059 Hepatology 2014 Sep
Analysis of extracellular RNA by digital PCR. Takahashi K, Yan IK, Kim C, Kim J, Patel T Frontiers in oncology 24926435 Front Oncol 2014
Long noncoding RNA in liver diseases. Takahashi K, Yan I, Haga H, Patel T Hepatology (Baltimore, Md.) 24493213 Hepatology 2014 Aug
Large Differences in Small RNA Composition Between Human Biofluids. Godoy PM, Bhakta NR, Barczak AJ, Cakmak H, Fisher S, MacKenzie TC, Patel T, Price RW, Smith JF, Woodruff PG, Erle DJ Cell reports 30380423 Cell Rep 2018 Oct 30
Extracellular Vesicles from Bone Marrow-Derived Mesenchymal Stem Cells Improve Survival from Lethal Hepatic Failure in Mice. Haga H, Yan IK, Takahashi K, Matsuda A, Patel T Stem cells translational medicine 28213967 Stem Cells Transl Med 2017 Apr
Molecular diagnosis of intrahepatic cholangiocarcinoma. Haga H, Patel T Journal of hepato-biliary-pancreatic sciences 25267595 J Hepatobiliary Pancreat Sci 2015 Feb
Extracellular vesicle-mediated transfer of long non-coding RNA ROR modulates chemosensitivity in human hepatocellular cancer. Takahashi K, Yan IK, Kogure T, Haga H, Patel T FEBS open bio 24918061 FEBS Open Bio 2014
Isolation of Tissue Extracellular Vesicles from the Liver. Ishiguro K, Yan IK, Patel T Journal of visualized experiments : JoVE 31498323 J Vis Exp 2019 Aug 21
In vitro toxicology studies of extracellular vesicles. Maji S, Yan IK, Parasramka M, Mohankumar S, Matsuda A, Patel T Journal of applied toxicology : JAT 27435060 J Appl Toxicol 2017 Mar
Long non-coding RNA regulation of liver cancer stem cell self-renewal offers new therapeutic targeting opportunities. Parasramka MA, Patel T Stem cell investigation 27358893 Stem Cell Investig 2016
Long non-coding RNAs as novel targets for therapy in hepatocellular carcinoma. Parasramka MA, Maji S, Matsuda A, Yan IK, Patel T Pharmacology & therapeutics 27013343 Pharmacol Ther 2016 May
GAIP interacting protein C-terminus regulates autophagy and exosome biogenesis of pancreatic cancer through metabolic pathways. Bhattacharya S, Pal K, Sharma AK, Dutta SK, Lau JS, Yan IK, Wang E, Elkhanany A, Alkharfy KM, Sanyal A, Patel TC, Chari ST, Spaller MR, Mukhopadhyay D PloS one 25469510 PLoS One 2014
Isolation of Extracellular RNA from Bile. Yan IK, Berdah VX, Patel T Methods in molecular biology (Clifton, N.J.) 29388136 Methods Mol Biol 2018
Multiplexed Detection and Quantitation of Extracellular Vesicle RNA Expression Using NanoString. Shukla N, Yan IK, Patel T Methods in molecular biology (Clifton, N.J.) 29388144 Methods Mol Biol 2018
Molecular evolution of genetic susceptibility to hepatocellular carcinoma. Ngamruengphong S, Patel T Digestive diseases and sciences 24357186 Dig Dis Sci 2014 May
MicroRNAs as paracrine signaling mediators in cancers and metabolic diseases. Matsuda A, Yan IK, Foye C, Parasramka M, Patel T Best practice & research. Clinical endocrinology & metabolism 27923452 Best Pract Res Clin Endocrinol Metab 2016 Oct
Extracellular vesicles from bone marrow-derived mesenchymal stem cells protect against murine hepatic ischemia/reperfusion injury. Haga H, Yan IK, Borrelli DA, Matsuda A, Parasramka M, Shukla N, Lee DD, Patel T Liver transplantation : official publication of the American Association for the Study of Liver Diseases and the International Liver Transplantation Society 28407355 Liver Transpl 2017 Jun
Tumour cell-derived extracellular vesicles interact with mesenchymal stem cells to modulate the microenvironment and enhance cholangiocarcinoma growth. Haga H, Yan IK, Takahashi K, Wood J, Zubair A, Patel T Journal of extracellular vesicles 25557794 J Extracell Vesicles 2015
Plasma extracellular RNA profiles in healthy and cancer patients. Yuan T, Huang X, Woodcock M, Du M, Dittmar R, Wang Y, Tsai S, Kohli M, Boardman L, Patel T, Wang L Scientific reports 26786760 Sci Rep 2016 Jan 20
Comparison of Clinical Features and Outcomes Between Intrahepatic Cholangiocarcinoma and Hepatocellular Carcinoma in the United States. Lee YT, Wang JJ, Luu M, Noureddin M, Nissen NN, Patel TC, Roberts LR, Singal AG, Gores GJ, Yang JD Hepatology (Baltimore, Md.) 34114675 Hepatology 2021 Nov
Assessment of response to therapy in hepatocellular carcinoma. Patel T, Harnois D Annals of medicine 24716738 Ann Med 2014 May
Modulation of hypoxia-signaling pathways by extracellular linc-RoR. Takahashi K, Yan IK, Haga H, Patel T Journal of cell science 24463816 J Cell Sci 2014 Apr 1
Nanovesicle-mediated delivery of anticancer agents effectively induced cell death and regressed intrahepatic tumors in athymic mice. George J, Yan IK, Patel T Laboratory investigation; a journal of technical methods and pathology 29748614 Lab Invest 2018 Jul
Mesenchymal stem cell derived extracellular vesicles: a promising new therapeutic approach for hepatic injury. Moirangthem A, Patel T Biotarget 30211398 Biotarget 2017 Sep
Droplet Digital PCR for Quantitation of Extracellular RNA. Yan IK, Lohray R, Patel T Methods in molecular biology (Clifton, N.J.) 29388142 Methods Mol Biol 2018
Milk-derived Extracellular Vesicles for Therapeutic Delivery of Small Interfering RNAs. Matsuda A, Patel T Methods in molecular biology (Clifton, N.J.) 29388145 Methods Mol Biol 2018
Applying extracellular vesicles based therapeutics in clinical trials - an ISEV position paper. Lener T, Gimona M, Aigner L, Börger V, Buzas E, Camussi G, Chaput N, Chatterjee D, Court FA, Del Portillo HA, O'Driscoll L, Fais S, Falcon-Perez JM, Felderhoff-Mueser U, Fraile L, Gho YS, Görgens A, Gupta RC, Hendrix A, Hermann DM, Hill AF, Hochberg F, Horn PA, de Kleijn D, Kordelas L, Kramer BW, Krämer-Albers EM, Laner-Plamberger S, Laitinen S, Leonardi T, Lorenowicz MJ, Lim SK, Lötvall J, Maguire CA, Marcilla A, Nazarenko I, Ochiya T, Patel T, Pedersen S, Pocsfalvi G, Pluchino S, Quesenberry P, Reischl IG, Rivera FJ, Sanzenbacher R, Schallmoser K, Slaper-Cortenbach I, Strunk D, Tonn T, Vader P, van Balkom BW, Wauben M, Andaloussi SE, Théry C, Rohde E, Giebel B Journal of extracellular vesicles 26725829 J Extracell Vesicles 2015
Extracellular vesicles in liver diseases. Maji S, Matsuda A, Yan IK, Parasramka M, Patel T American journal of physiology. Gastrointestinal and liver physiology 28039157 Am J Physiol Gastrointest Liver Physiol 2017 Mar 1
Comparison of miRNA quantitation by Nanostring in serum and plasma samples. Foye C, Yan IK, David W, Shukla N, Habboush Y, Chase L, Ryland K, Kesari V, Patel T PloS one 29211799 PLoS One 2017
Marrow Hematopoietic Stem Cells Revisited: They Exist in a Continuum and are Not Defined by Standard Purification Approaches; Then There are the Microvesicles. Quesenberry PJ, Goldberg L, Aliotta J, Dooner M Frontiers in oncology 24772390 Front Oncol 2014
Minimal experimental requirements for definition of extracellular vesicles and their functions: a position statement from the International Society for Extracellular Vesicles. Lötvall J, Hill AF, Hochberg F, Buzás EI, Di Vizio D, Gardiner C, Gho YS, Kurochkin IV, Mathivanan S, Quesenberry P, Sahoo S, Tahara H, Wauben MH, Witwer KW, Théry C Journal of extracellular vesicles 25536934 J Extracell Vesicles 2014
Biodistribution of mesenchymal stem cell-derived extracellular vesicles in a model of acute kidney injury monitored by optical imaging. Grange C, Tapparo M, Bruno S, Chatterjee D, Quesenberry PJ, Tetta C, Camussi G International journal of molecular medicine 24573178 Int J Mol Med 2014 May
Role of Alix in miRNA packaging during extracellular vesicle biogenesis. Iavello A, Frech VS, Gai C, Deregibus MC, Quesenberry PJ, Camussi G International journal of molecular medicine 26935291 Int J Mol Med 2016 Apr
Concise reviews: A stem cell apostasy: a tale of four H words. Quesenberry PJ, Goldberg LR, Dooner MS Stem cells (Dayton, Ohio) 25183450 Stem Cells 2015 Jan
Biodistribution of Mesenchymal Stem Cell-Derived Extracellular Vesicles in a Radiation Injury Bone Marrow Murine Model. Wen S, Dooner M, Papa E, Del Tatto M, Pereira M, Borgovan T, Cheng Y, Goldberg L, Liang O, Camussi G, Quesenberry P International journal of molecular sciences 31684046 Int J Mol Sci 2019 Nov 2
Extracellular Vesicle-Mediated Reversal of Paclitaxel Resistance in Prostate Cancer. Wang JQ, DeChalus A, Chatterjee DN, Keller ET, Mizokami A, Camussi G, Mendelsohn AR, Renzulli Ii JF, Quesenberry PJ, Chatterjee D Critical reviews in oncogenesis 27279238 Crit Rev Oncog 2015
Mesenchymal stromal cell-derived extracellular vesicles rescue radiation damage to murine marrow hematopoietic cells. Wen S, Dooner M, Cheng Y, Papa E, Del Tatto M, Pereira M, Deng Y, Goldberg L, Aliotta J, Chatterjee D, Stewart C, Carpanetto A, Collino F, Bruno S, Camussi G, Quesenberry P Leukemia 27150009 Leukemia 2016 Nov
Role of extracellular vesicles in stem cell biology. Bruno S, Chiabotto G, Favaro E, Deregibus MC, Camussi G American journal of physiology. Cell physiology 31091143 Am J Physiol Cell Physiol 2019 Aug 1
Extracellular vesicles released from mesenchymal stromal cells modulate miRNA in renal tubular cells and inhibit ATP depletion injury. Lindoso RS, Collino F, Bruno S, Araujo DS, Sant'Anna JF, Tetta C, Provero P, Quesenberry PJ, Vieyra A, Einicker-Lamas M, Camussi G Stem cells and development 24669934 Stem Cells Dev 2014 Aug 1
A new stem cell biology: the continuum and microvesicles. Quesenberry PJ, Dooner MS, Goldberg LR, Aliotta JM, Pereira M, Amaral A, Del Tatto MM, Hixson DC, Ramratnam B Transactions of the American Clinical and Climatological Association 23303982 Trans Am Clin Climatol Assoc 2012
Reversal of chemosensitivity and induction of cell malignancy of a non-malignant prostate cancer cell line upon extracellular vesicle exposure. Panagopoulos K, Cross-Knorr S, Dillard C, Pantazatos D, Del Tatto M, Mills D, Goldstein L, Renzulli J, Quesenberry P, Chatterjee D Molecular cancer 24103426 Mol Cancer 2013 Oct 8
Exosome and Microvesicle-Enriched Fractions Isolated from Mesenchymal Stem Cells by Gradient Separation Showed Different Molecular Signatures and Functions on Renal Tubular Epithelial Cells. Collino F, Pomatto M, Bruno S, Lindoso RS, Tapparo M, Sicheng W, Quesenberry P, Camussi G Stem cell reviews and reports 28070858 Stem Cell Rev Rep 2017 Apr
Renal Regenerative Potential of Different Extracellular Vesicle Populations Derived from Bone Marrow Mesenchymal Stromal Cells. Bruno S, Tapparo M, Collino F, Chiabotto G, Deregibus MC, Soares Lindoso R, Neri F, Kholia S, Giunti S, Wen S, Quesenberry P, Camussi G Tissue engineering. Part A 28471327 Tissue Eng Part A 2017 Nov
AKI Recovery Induced by Mesenchymal Stromal Cell-Derived Extracellular Vesicles Carrying MicroRNAs. Collino F, Bruno S, Incarnato D, Dettori D, Neri F, Provero P, Pomatto M, Oliviero S, Tetta C, Quesenberry PJ, Camussi G Journal of the American Society of Nephrology : JASN 25901032 J Am Soc Nephrol 2015 Oct
Induction of pulmonary hypertensive changes by extracellular vesicles from monocrotaline-treated mice. Aliotta JM, Pereira M, Amaral A, Sorokina A, Igbinoba Z, Hasslinger A, El-Bizri R, Rounds SI, Quesenberry PJ, Klinger JR Cardiovascular research 23867631 Cardiovasc Res 2013 Dec 1
Cellular phenotype and extracellular vesicles: basic and clinical considerations. Quesenberry PJ, Goldberg LR, Aliotta JM, Dooner MS, Pereira MG, Wen S, Camussi G Stem cells and development 24564699 Stem Cells Dev 2014 Jul 1
Hematopoietic Stem Cells: Uncomfortable Considerations. Quesenberry P, Goldberg L, Dooner M, Wen S Current molecular biology reports 34194956 Curr Mol Biol Rep 2017 Sep
Mesenchymal Stem Cell Derived Extracellular Vesicles Ameliorate Kidney Injury in Aristolochic Acid Nephropathy. Kholia S, Herrera Sanchez MB, Cedrino M, Papadimitriou E, Tapparo M, Deregibus MC, Bruno S, Antico F, Brizzi MF, Quesenberry PJ, Camussi G Frontiers in cell and developmental biology 32266268 Front Cell Dev Biol 2020
Perspectives on the Potential Therapeutic Uses of Vesicles. Camussi G, Quesenberry PJ Exosomes and microvesicles 26005501 Exosomes Microvesicles 2013
Role of extracellular RNA-carrying vesicles in cell differentiation and reprogramming. Quesenberry PJ, Aliotta J, Deregibus MC, Camussi G Stem cell research & therapy 26334526 Stem Cell Res Ther 2015 Sep 3
Quantitatively controlling expression of miR-17~92 determines colon tumor progression in a mouse tumor model. Jiang H, Wang P, Wang Q, Wang B, Mu J, Zhuang X, Zhang L, Yan J, Miller D, Zhang HG The American journal of pathology 24681249 Am J Pathol 2014 May
Enterobacteria-secreted particles induce production of exosome-like S1P-containing particles by intestinal epithelium to drive Th17-mediated tumorigenesis. Deng Z, Mu J, Tseng M, Wattenberg B, Zhuang X, Egilmez NK, Wang Q, Zhang L, Norris J, Guo H, Yan J, Haribabu B, Miller D, Zhang HG Nature communications 25907800 Nat Commun 2015 Apr 24
Grapefruit-Derived Nanovectors Use an Activated Leukocyte Trafficking Pathway to Deliver Therapeutic Agents to Inflammatory Tumor Sites. Wang Q, Ren Y, Mu J, Egilmez NK, Zhuang X, Deng Z, Zhang L, Yan J, Miller D, Zhang HG Cancer research 25883092 Cancer Res 2015 Jun 15
MVP-mediated exosomal sorting of miR-193a promotes colon cancer progression. Teng Y, Ren Y, Hu X, Mu J, Samykutty A, Zhuang X, Deng Z, Kumar A, Zhang L, Merchant ML, Yan J, Miller DM, Zhang HG Nature communications 28211508 Nat Commun 2017 Feb 17
Ginger-derived nanoparticles protect against alcohol-induced liver damage. Zhuang X, Deng ZB, Mu J, Zhang L, Yan J, Miller D, Feng W, McClain CJ, Zhang HG Journal of extracellular vesicles 26610593 J Extracell Vesicles 2015
Biological Nanomotors with a Revolution, Linear, or Rotation Motion Mechanism. Guo P, Noji H, Yengo CM, Zhao Z, Grainge I Microbiology and molecular biology reviews : MMBR 26819321 Microbiol Mol Biol Rev 2016 Mar
Interspecies communication between plant and mouse gut host cells through edible plant derived exosome-like nanoparticles. Mu J, Zhuang X, Wang Q, Jiang H, Deng ZB, Wang B, Zhang L, Kakar S, Jun Y, Miller D, Zhang HG Molecular nutrition & food research 24842810 Mol Nutr Food Res 2014 Jul
Blood exosomes regulate the tissue distribution of grapefruit-derived nanovector via CD36 and IGFR1 pathways. Wang QL, Zhuang X, Sriwastva MK, Mu J, Teng Y, Deng Z, Zhang L, Sundaram K, Kumar A, Miller D, Yan J, Zhang HG Theranostics 30429877 Theranostics 2018
Broccoli-Derived Nanoparticle Inhibits Mouse Colitis by Activating Dendritic Cell AMP-Activated Protein Kinase. Deng Z, Rong Y, Teng Y, Mu J, Zhuang X, Tseng M, Samykutty A, Zhang L, Yan J, Miller D, Suttles J, Zhang HG Molecular therapy : the journal of the American Society of Gene Therapy 28274798 Mol Ther 2017 Jul 5
A Plant Pathogen Type III Effector Protein Subverts Translational Regulation to Boost Host Polyamine Levels. Wu D, von Roepenack-Lahaye E, Buntru M, de Lange O, Schandry N, Pérez-Quintero AL, Weinberg Z, Lowe-Power TM, Szurek B, Michael AJ, Allen C, Schillberg S, Lahaye T Cell host & microbe 31628081 Cell Host Microbe 2019 Nov 13
Exosome-like nanoparticles from intestinal mucosal cells carry prostaglandin E2 and suppress activation of liver NKT cells. Deng ZB, Zhuang X, Ju S, Xiang X, Mu J, Liu Y, Jiang H, Zhang L, Mobley J, McClain C, Feng W, Grizzle W, Yan J, Miller D, Kronenberg M, Zhang HG Journal of immunology (Baltimore, Md. : 1950) 23467936 J Immunol 2013 Apr 1
Grapefruit-derived Nanovectors Delivering Therapeutic miR17 Through an Intranasal Route Inhibit Brain Tumor Progression. Zhuang X, Teng Y, Samykutty A, Mu J, Deng Z, Zhang L, Cao P, Rong Y, Yan J, Miller D, Zhang HG Molecular therapy : the journal of the American Society of Gene Therapy 26444082 Mol Ther 2016 Feb
Second to None: Plant Secondary siRNAs as Defensive Agents against Phytophthora. Axtell MJ Cell host & microbe 30629921 Cell Host Microbe 2019 Jan 9
Restoration of miR17/20a in solid tumor cells enhances the natural killer cell antitumor activity by targeting Mekk2. Jiang H, Wang P, Li X, Wang Q, Deng ZB, Zhuang X, Mu J, Zhang L, Wang B, Yan J, Miller D, Zhang HG Cancer immunology research 24801835 Cancer Immunol Res 2014 Aug
Delivery of therapeutic agents by nanoparticles made of grapefruit-derived lipids. Wang Q, Zhuang X, Mu J, Deng ZB, Jiang H, Zhang L, Xiang X, Wang B, Yan J, Miller D, Zhang HG Nature communications 23695661 Nat Commun 2013
Assessment and comparison of thermal stability of phosphorothioate-DNA, DNA, RNA, 2'-F RNA, and LNA in the context of Phi29 pRNA 3WJ. Piao X, Wang H, Binzel DW, Guo P RNA (New York, N.Y.) 29051199 RNA 2018 Jan
Grapefruit-derived nanovectors deliver miR-18a for treatment of liver metastasis of colon cancer by induction of M1 macrophages. Teng Y, Mu J, Hu X, Samykutty A, Zhuang X, Deng Z, Zhang L, Cao P, Yan J, Miller D, Zhang HG Oncotarget 27028860 Oncotarget 2016 May 3
Arrowtail RNA for Ligand Display on Ginger Exosome-like Nanovesicles to Systemic Deliver siRNA for Cancer Suppression. Li Z, Wang H, Yin H, Bennett C, Zhang HG, Guo P Scientific reports 30279553 Sci Rep 2018 Oct 2
Exosomes miR-126a released from MDSC induced by DOX treatment promotes lung metastasis. Deng Z, Rong Y, Teng Y, Zhuang X, Samykutty A, Mu J, Zhang L, Cao P, Yan J, Miller D, Zhang HG Oncogene 27345402 Oncogene 2017 Feb 2
An Arginine Finger Regulates the Sequential Action of Asymmetrical Hexameric ATPase in the Double-Stranded DNA Translocation Motor. Zhao Z, De-Donatis GM, Schwartz C, Fang H, Li J, Guo P Molecular and cellular biology 27457616 Mol Cell Biol 2016 Oct 1
Nanoparticle orientation to control RNA loading and ligand display on extracellular vesicles for cancer regression. Pi F, Binzel DW, Lee TJ, Li Z, Sun M, Rychahou P, Li H, Haque F, Wang S, Croce CM, Guo B, Evers BM, Guo P Nature nanotechnology 29230043 Nat Nanotechnol 2018 Jan
High glucose macrophage exosomes enhance atherosclerosis by driving cellular proliferation & hematopoiesis. Bouchareychas L, Duong P, Phu TA, Alsop E, Meechoovet B, Reiman R, Ng M, Yamamoto R, Nakauchi H, Gasper WJ, Van Keuren-Jensen K, Raffai RL iScience 34381972 iScience 2021 Aug 20
Direct isolation of small extracellular vesicles from human blood using viscoelastic microfluidics. Meng Y, Zhang Y, Bühler M, Wang S, Asghari M, Stürchler A, Mateescu B, Weiss T, Stavrakis S, deMello AJ Science advances 37801500 Sci Adv 2023 Oct 6
Enzyme-Assisted Nucleic Acid Detection for Infectious Disease Diagnostics: Moving toward the Point-of-Care. Suea-Ngam A, Bezinge L, Mateescu B, Howes PD, deMello AJ, Richards DA ACS sensors 32838523 ACS Sens 2020 Sep 25
Visualizing transfer of microbial biomolecules by outer membrane vesicles in microbe-host-communication in vivo. Bittel M, Reichert P, Sarfati I, Dressel A, Leikam S, Uderhardt S, Stolzer I, Phu TA, Ng M, Vu NK, Tenzer S, Distler U, Wirtz S, Rothhammer V, Neurath MF, Raffai RL, Günther C, Momma S Journal of extracellular vesicles 34664784 J Extracell Vesicles 2021 Oct
Macrophage Exosomes Resolve Atherosclerosis by Regulating Hematopoiesis and Inflammation via MicroRNA Cargo. Bouchareychas L, Duong P, Covarrubias S, Alsop E, Phu TA, Chung A, Gomes M, Wong D, Meechoovet B, Capili A, Yamamoto R, Nakauchi H, McManus MT, Carpenter S, Van Keuren-Jensen K, Raffai RL Cell reports 32668250 Cell Rep 2020 Jul 14
IL-4 polarized human macrophage exosomes control cardiometabolic inflammation and diabetes in obesity. Phu TA, Ng M, Vu NK, Bouchareychas L, Raffai RL Molecular therapy : the journal of the American Society of Gene Therapy 35292359 Mol Ther 2022 Jun 1
M2 Macrophage Exosomes Reverse Cardiac Functional Decline in Mice with Diet-Induced Myocardial Infarction by Suppressing Type 1 Interferon Signaling in Myeloid Cells. Ng M, Gao AS, Phu TA, Vu NK, Raffai RL bioRxiv : the preprint server for biology 39345592 bioRxiv 2024 Sep 19
ApoE expression in macrophages communicates immunometabolic signaling that controls hyperlipidemia-driven hematopoiesis & inflammation via extracellular vesicles. Phu TA, Ng M, Vu NK, Gao AS, Raffai RL Journal of extracellular vesicles 37593979 J Extracell Vesicles 2023 Aug
Muscle-Derived Beige Adipose Precursors Secrete Promyogenic Exosomes That Treat Rotator Cuff Muscle Degeneration in Mice and Are Identified in Humans by Single-Cell RNA Sequencing. Davies MR, Garcia S, Liu M, Chi H, Kim HT, Raffai RL, Liu X, Feeley BT The American journal of sports medicine 35604307 Am J Sports Med 2022 Jul
On your MARCKS, get set, deliver: Engineering extracellular vesicles. Witwer KW Molecular therapy : the journal of the American Society of Gene Therapy 33891862 Mol Ther 2021 May 5
Nipping disease in the bud: nSMase2 inhibitors as therapeutics in extracellular vesicle-mediated diseases. Tallon C, Hollinger KR, Pal A, Bell BJ, Rais R, Tsukamoto T, Witwer KW, Haughey NJ, Slusher BS Drug discovery today 33798648 Drug Discov Today 2021 Jul
Characterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platforms. Arab T, Mallick ER, Huang Y, Dong L, Liao Z, Zhao Z, Gololobova O, Smith B, Haughey NJ, Pienta KJ, Slusher BS, Tarwater PM, Tosar JP, Zivkovic AM, Vreeland WN, Paulaitis ME, Witwer KW Journal of extracellular vesicles 33850608 J Extracell Vesicles 2021 Apr
How does an RNA selfie work? EV-associated RNA in innate immunity as self or danger. Xiao Y, Driedonks T, Witwer KW, Wang Q, Yin H Journal of extracellular vesicles 32944182 J Extracell Vesicles 2020 Jul 15
Fragmentation of extracellular ribosomes and tRNAs shapes the extracellular RNAome. Tosar JP, Segovia M, Castellano M, Gámbaro F, Akiyama Y, Fagúndez P, Olivera Á, Costa B, Possi T, Hill M, Ivanov P, Cayota A Nucleic acids research 32785615 Nucleic Acids Res 2020 Dec 16
Extracellular vesicles and chronic inflammation during HIV infection. Pérez PS, Romaniuk MA, Duette GA, Zhao Z, Huang Y, Martin-Jaular L, Witwer KW, Théry C, Ostrowski M Journal of extracellular vesicles 31998449 J Extracell Vesicles 2019
Towards defining reference materials for measuring extracellular vesicle refractive index, epitope abundance, size and concentration. Welsh JA, van der Pol E, Bettin BA, Carter DRF, Hendrix A, Lenassi M, Langlois MA, Llorente A, van de Nes AS, Nieuwland R, Tang V, Wang L, Witwer KW, Jones JC Journal of extracellular vesicles 33062218 J Extracell Vesicles 2020 Sep 24
Release of extracellular vesicle miR-494-3p by ARPE-19 cells with impaired mitochondria. Ahn JY, Datta S, Bandeira E, Cano M, Mallick E, Rai U, Powell B, Tian J, Witwer KW, Handa JT, Paulaitis ME Biochimica et biophysica acta. General subjects 32240720 Biochim Biophys Acta Gen Subj 2021 Apr
Circulating SNORD57 rather than piR-54265 is a promising biomarker for colorectal cancer: common pitfalls in the study of somatic piRNAs in cancer. Tosar JP, García-Silva MR, Cayota A RNA (New York, N.Y.) 33376191 RNA 2021 Apr
Revisiting Extracellular RNA Release, Processing, and Function. Tosar JP, Witwer K, Cayota A Trends in biochemical sciences 33413996 Trends Biochem Sci 2021 Jun
Nicked tRNAs are stable reservoirs of tRNA halves in cells and biofluids. Costa B, Li Calzi M, Castellano M, Blanco V, Cuevasanta E, Litvan I, Ivanov P, Witwer K, Cayota A, Tosar JP Proceedings of the National Academy of Sciences of the United States of America 36652478 Proc Natl Acad Sci U S A 2023 Jan 24
Extracellular vesicles: The next generation in gene therapy delivery. Cecchin R, Troyer Z, Witwer K, Morris KV Molecular therapy : the journal of the American Society of Gene Therapy 36698310 Mol Ther 2023 May 3
Comprehensive evaluation of methods for small extracellular vesicles separation from human plasma, urine and cell culture medium. Dong L, Zieren RC, Horie K, Kim CJ, Mallick E, Jing Y, Feng M, Kuczler MD, Green J, Amend SR, Witwer KW, de Reijke TM, Cho YK, Pienta KJ, Xue W Journal of extracellular vesicles 33489012 J Extracell Vesicles 2020 Dec
Updating MISEV: Evolving the minimal requirements for studies of extracellular vesicles. Witwer KW, Goberdhan DC, O'Driscoll L, Théry C, Welsh JA, Blenkiron C, Buzás EI, Di Vizio D, Erdbrügger U, Falcón-Pérez JM, Fu QL, Hill AF, Lenassi M, Lötvall J, Nieuwland R, Ochiya T, Rome S, Sahoo S, Zheng L Journal of extracellular vesicles 34953156 J Extracell Vesicles 2021 Dec
Developing Treatments for Alzheimer's and Related Disorders with Precision Medicine: A Vision. Avramopoulos D, Kapogiannis D, Leoutsakos JM, Lyketsos CG, Mahairaki V, Nowrangi M, Oishi K, Oh ES, Rosenberg PB, Samus Q, Smith GS, Witwer K, Yasar S, Zandi PP Advances in experimental medicine and biology 35023131 Adv Exp Med Biol 2021
Associations of age and sex with characteristics of extracellular vesicles and protein-enriched fractions of blood plasma. Huang Y, Feng J, Xu J, Dong L, Su W, Li B, Witwer KW, Zheng L Aging cell 39373063 Aging Cell 2025 Jan
Cigarette smoke alters circRNA expression in human T-cells. Hong SJ, Liao Z, Witwer KW, Russell AE F1000Research 39963375 F1000Res 2023
Analysis of TEM micrographs with deep learning reveals APOE genotype-specific associations between HDL particle diameter and Alzheimer's dementia. Zheng JJ, Hong BV, Agus JK, Tang X, Guo F, Lebrilla CB, Maezawa I, Jin LW, Vreeland WN, Ripple DC, Zivkovic AM Cell reports methods 39874947 Cell Rep Methods 2025 Jan 27
Extracellular vesicle interplay in cardiovascular pathophysiology. Saheera S, Jani VP, Witwer KW, Kutty S American journal of physiology. Heart and circulatory physiology 33666501 Am J Physiol Heart Circ Physiol 2021 May 1
Isolation of HDL by sequential flotation ultracentrifugation followed by size exclusion chromatography reveals size-based enrichment of HDL-associated proteins. Zheng JJ, Agus JK, Hong BV, Tang X, Rhodes CH, Houts HE, Zhu C, Kang JW, Wong M, Xie Y, Lebrilla CB, Mallick E, Witwer KW, Zivkovic AM Scientific reports 34373542 Sci Rep 2021 Aug 9
miRNA profiling of primate cervicovaginal lavage and extracellular vesicles reveals miR-186-5p as a potential antiretroviral factor in macrophages. Zhao Z, Muth DC, Mulka K, Liao Z, Powell BH, Hancock GV, Metcalf Pate KA, Witwer KW FEBS open bio 33017084 FEBS Open Bio 2020 Oct
Critical considerations for the development of potency tests for therapeutic applications of mesenchymal stromal cell-derived small extracellular vesicles. Gimona M, Brizzi MF, Choo ABH, Dominici M, Davidson SM, Grillari J, Hermann DM, Hill AF, de Kleijn D, Lai RC, Lai CP, Lim R, Monguió-Tortajada M, Muraca M, Ochiya T, Ortiz LA, Toh WS, Yi YW, Witwer KW, Giebel B, Lim SK Cytotherapy 33934807 Cytotherapy 2021 May
Methods for Separation and Characterization of Extracellular Vesicles: Results of a Worldwide Survey Performed by the ISEV Rigor and Standardization Subcommittee. Royo F, Théry C, Falcón-Pérez JM, Nieuwland R, Witwer KW Cells 32854228 Cells 2020 Aug 25
Extracellular tRNAs and tRNA-derived fragments. Tosar JP, Cayota A RNA biology 32070197 RNA Biol 2020 Aug
Neutral sphingomyelinase 2 inhibition attenuates extracellular vesicle release and improves neurobehavioral deficits in murine HIV. Zhu X, Hollinger KR, Huang Y, Borjabad A, Kim BH, Arab T, Thomas AG, Moniruzzaman M, Lovell L, Turchinovich A, Witwer KW, Volsky DJ, Haughey NJ, Slusher BS Neurobiology of disease 35462006 Neurobiol Dis 2022 Jul
L1CAM-associated extracellular vesicles: A systematic review of nomenclature, sources, separation, and characterization. Gomes DE, Witwer KW Journal of extracellular biology 35492832 J Extracell Biol 2022 Mar
Extracellular vesicles versus synthetic nanoparticles for drug delivery. Witwer KW, Wolfram J Nature reviews. Materials 36117545 Nat Rev Mater 2021 Feb
Blebs and former blebs: From surface protrusions to extracellular vesicles in cancer signalling, anoikis resistance and beyond. Di Vizio D, Schoppet M, Weeraratna A, Witwer KW Journal of extracellular biology 38162121 J Extracell Biol 2023 Oct
Toward a human brain extracellular vesicle atlas: Characteristics of extracellular vesicles from different brain regions, including small RNA and protein profiles. Huang Y, Arab T, Russell AE, Mallick ER, Nagaraj R, Gizzie E, Redding-Ochoa J, Troncoso JC, Pletnikova O, Turchinovich A, Routenberg DA, Witwer KW Interdisciplinary medicine 38089920 Interdiscip Med 2023 Oct
Towards a human brain EV atlas: Characteristics of EVs from different brain regions, including small RNA and protein profiles. Huang Y, Arab T, Russell AE, Mallick ER, Nagaraj R, Gizzie E, Redding-Ochoa J, Troncoso JC, Pletnikova O, Turchinovich A, Routenberg DA, Witwer KW bioRxiv : the preprint server for biology 37214955 bioRxiv 2023 May 13
Longitudinal characterization of circulating extracellular vesicles and small RNA during simian immunodeficiency virus infection and antiretroviral therapy. Huang Y, Liao Z, Dang P, Queen S, Abreu CM, Gololobova O, Zheng L, Witwer KW AIDS (London, England) 36779477 AIDS 2023 Apr 1
Letter by Halushka and Witwer Regarding Article, "Circulating MicroRNA-122-5p Is Associated With a Lack of Improvement in Left Ventricular Function After Transcatheter Aortic Valve Replacement and Regulates Viability of Cardiomyocytes Through Extracellular Vesicles". Halushka MK, Witwer KW Circulation 36689572 Circulation 2023 Jan 24
Lutein and Zeaxanthin Enhance, Whereas Oxidation, Fructosylation, and Low pH Damage High-Density Lipoprotein Biological Functionality. Zheng J, Hong BV, Agus JK, Tang X, Klebaner NR, Chen S, Guo F, Harvey DJ, Lebrilla CB, Zivkovic AM Antioxidants (Basel, Switzerland) 38790721 Antioxidants (Basel) 2024 May 18
An ex vivo and in vitro investigation of extracellular vesicle interactions with B cells of Macaca nemestrina and humans. Pachane BC, Rodriguez BV, Shirk EN, Gololobova O, Carlson B, Queen SE, Erickson LD, Selistre-de-Araujo HS, Witwer KW bioRxiv : the preprint server for biology 39990430 bioRxiv 2025 Feb 16
Hitting the Bullseye: Are extracellular vesicles on target? Noren Hooten N, Yáñez-Mó M, DeRita R, Russell A, Quesenberry P, Ramratnam B, Robbins PD, Di Vizio D, Wen S, Witwer KW, Languino LR Journal of extracellular vesicles 33708359 J Extracell Vesicles 2020 Nov
Rigor and standardization of extracellular vesicle research: Paving the road towards robustness. Nieuwland R, Falcón-Pérez JM, Théry C, Witwer KW Journal of extracellular vesicles 33343835 J Extracell Vesicles 2020 Dec
Urinary extracellular vesicles: A position paper by the Urine Task Force of the International Society for Extracellular Vesicles. Erdbrügger U, Blijdorp CJ, Bijnsdorp IV, Borràs FE, Burger D, Bussolati B, Byrd JB, Clayton A, Dear JW, Falcón-Pérez JM, Grange C, Hill AF, Holthöfer H, Hoorn EJ, Jenster G, Jimenez CR, Junker K, Klein J, Knepper MA, Koritzinsky EH, Luther JM, Lenassi M, Leivo J, Mertens I, Musante L, Oeyen E, Puhka M, van Royen ME, Sánchez C, Soekmadji C, Thongboonkerd V, van Steijn V, Verhaegh G, Webber JP, Witwer K, Yuen PST, Zheng L, Llorente A, Martens-Uzunova ES Journal of extracellular vesicles 34035881 J Extracell Vesicles 2021 May
Functional assays to assess the therapeutic potential of extracellular vesicles. Nguyen VVT, Witwer KW, Verhaar MC, Strunk D, van Balkom BWM Journal of extracellular vesicles 33708360 J Extracell Vesicles 2020 Nov
miR-210 Expression Is Strongly Hypoxia-Induced in Anaplastic Thyroid Cancer Cell Lines and Is Associated with Extracellular Vesicles and Argonaute-2. Powell BH, Turchinovich A, Wang Y, Gololobova O, Buschmann D, Zeiger MA, Umbricht CB, Witwer KW International journal of molecular sciences 36901936 Int J Mol Sci 2023 Feb 24
Exosomes, microvesicles, and other extracellular vesicles-a Keystone Symposia report. Cable J, Witwer KW, Coffey RJ, Milosavljevic A, von Lersner AK, Jimenez L, Pucci F, Barr MM, Dekker N, Barman B, Humphrys D, Williams J, de Palma M, Guo W, Bastos N, Hill AF, Levy E, Hantak MP, Crewe C, Aikawa E, Adamczyk AM, Zanotto TM, Ostrowski M, Arab T, Rabe DC, Sheikh A, da Silva DR, Jones JC, Okeoma C, Gaborski T, Zhang Q, Gololobova O Annals of the New York Academy of Sciences 36961472 Ann N Y Acad Sci 2023 May
Detection of the interactions of tumour derived extracellular vesicles with immune cells is dependent on EV-labelling methods. Loconte L, Arguedas D, El R, Zhou A, Chipont A, Guyonnet L, Guerin C, Piovesana E, Vázquez-Ibar JL, Joliot A, Théry C, Martín-Jaular L Journal of extracellular vesicles 38031976 J Extracell Vesicles 2023 Dec
Methods for the identification and characterization of extracellular vesicles in cardiovascular studies: from exosomes to microvesicles. Davidson SM, Boulanger CM, Aikawa E, Badimon L, Barile L, Binder CJ, Brisson A, Buzas E, Emanueli C, Jansen F, Katsur M, Lacroix R, Lim SK, Mackman N, Mayr M, Menasché P, Nieuwland R, Sahoo S, Takov K, Thum T, Vader P, Wauben MHM, Witwer K, Sluijter JPG Cardiovascular research 35325061 Cardiovasc Res 2023 Mar 17
The evolving paradigm of extracellular vesicles in intercellular signaling and delivery of therapeutic RNAs. Morris KV, Witwer KW Molecular therapy : the journal of the American Society of Gene Therapy 35643080 Mol Ther 2022 Jul 6
Exomeres and Supermeres: monolithic or diverse? Tosar JP, Cayota A, Witwer K Journal of extracellular biology 36311878 J Extracell Biol 2022 Jun
Phase 2 of extracellular RNA communication consortium charts next-generation approaches for extracellular RNA research. Mateescu B, Jones JC, Alexander RP, Alsop E, An JY, Asghari M, Boomgarden A, Bouchareychas L, Cayota A, Chang HC, Charest A, Chiu DT, Coffey RJ, Das S, De Hoff P, deMello A, D'Souza-Schorey C, Elashoff D, Eliato KR, Franklin JL, Galas DJ, Gerstein MB, Ghiran IH, Go DB, Gould S, Grogan TR, Higginbotham JN, Hladik F, Huang TJ, Huo X, Hutchins E, Jeppesen DK, Jovanovic-Talisman T, Kim BYS, Kim S, Kim KM, Kim Y, Kitchen RR, Knouse V, LaPlante EL, Lebrilla CB, Lee LJ, Lennon KM, Li G, Li F, Li T, Liu T, Liu Z, Maddox AL, McCarthy K, Meechoovet B, Maniya N, Meng Y, Milosavljevic A, Min BH, Morey A, Ng M, Nolan J, De Oliveira Junior GP, Paulaitis ME, Phu TA, Raffai RL, Reátegui E, Roth ME, Routenberg DA, Rozowsky J, Rufo J, Senapati S, Shachar S, Sharma H, Sood AK, Stavrakis S, Stürchler A, Tewari M, Tosar JP, Tucker-Schwartz AK, Turchinovich A, Valkov N, Van Keuren-Jensen K, Vickers KC, Vojtech L, Vreeland WN, Wang C, Wang K, Wang Z, Welsh JA, Witwer KW, Wong DTW, Xia J, Xie YH, Yang K, Zaborowski MP, Zhang C, Zhang Q, Zivkovic AM, Laurent LC iScience 35958027 iScience 2022 Aug 19
Pharmacokinetics and biodistribution of extracellular vesicles administered intravenously and intranasally to Macaca nemestrina. Driedonks T, Jiang L, Carlson B, Han Z, Liu G, Queen SE, Shirk EN, Gololobova O, Liao Z, Nyberg LH, Lima G, Paniushkina L, Garcia-Contreras M, Schonvisky K, Castell N, Stover M, Guerrero-Martin S, Richardson R, Smith B, Machairaki V, Lai CP, Izzi JM, Hutchinson EK, Pate KAM, Witwer KW Journal of extracellular biology 36591537 J Extracell Biol 2022 Oct
Lipid-Based Nutrient Supplementation Increases High-Density Lipoprotein (HDL) Cholesterol Efflux Capacity and Is Associated with Changes in the HDL Glycoproteome in Children. Hong BV, Zhu C, Wong M, Sacchi R, Rhodes CH, Kang JW, Arnold CD, Adu-Afarwuah S, Lartey A, Oaks BM, Lebrilla CB, Dewey KG, Zivkovic AM ACS omega 34870025 ACS Omega 2021 Nov 30
A brief history of nearly EV-erything - The rise and rise of extracellular vesicles. Couch Y, Buzàs EI, Di Vizio D, Gho YS, Harrison P, Hill AF, Lötvall J, Raposo G, Stahl PD, Théry C, Witwer KW, Carter DRF Journal of extracellular vesicles 34919343 J Extracell Vesicles 2021 Dec
HDL Function across the Lifespan: From Childhood, to Pregnancy, to Old Age. Hong BV, Zheng J, Zivkovic AM International journal of molecular sciences 37894984 Int J Mol Sci 2023 Oct 18
An ex vivo model of interactions between extracellular vesicles and peripheral mononuclear blood cells in whole blood. Rodriguez BV, Wen Y, Shirk EN, Vazquez S, Gololobova O, Maxwell A, Plunkard J, Castell N, Carlson B, Queen SE, Izzi JM, Driedonks TAP, Witwer KW Journal of extracellular vesicles 38047476 J Extracell Vesicles 2023 Dec
Ribonuclease activity undermines immune sensing of naked extracellular RNA. Castellano M, Blanco V, Calzi ML, Costa B, Witwer K, Hill M, Cayota A, Segovia M, Tosar JP bioRxiv : the preprint server for biology 38712104 bioRxiv 2024 Apr 23
Biological membranes in EV biogenesis, stability, uptake, and cargo transfer: an ISEV position paper arising from the ISEV membranes and EVs workshop. Russell AE, Sneider A, Witwer KW, Bergese P, Bhattacharyya SN, Cocks A, Cocucci E, Erdbrügger U, Falcon-Perez JM, Freeman DW, Gallagher TM, Hu S, Huang Y, Jay SM, Kano SI, Lavieu G, Leszczynska A, Llorente AM, Lu Q, Mahairaki V, Muth DC, Noren Hooten N, Ostrowski M, Prada I, Sahoo S, Schøyen TH, Sheng L, Tesch D, Van Niel G, Vandenbroucke RE, Verweij FJ, Villar AV, Wauben M, Wehman AM, Yin H, Carter DRF, Vader P Journal of extracellular vesicles 31762963 J Extracell Vesicles 2019
Stable tRNA halves can be sorted into extracellular vesicles and delivered to recipient cells in a concentration-dependent manner. Gámbaro F, Li Calzi M, Fagúndez P, Costa B, Greif G, Mallick E, Lyons S, Ivanov P, Witwer K, Cayota A, Tosar JP RNA biology 31885318 RNA Biol 2020 Aug
Brain Tissue-Derived Extracellular Vesicles in Alzheimer's Disease Display Altered Key Protein Levels Including Cell Type-Specific Markers. Huang Y, Driedonks TAP, Cheng L, Rajapaksha H, Routenberg DA, Nagaraj R, Redding J, Arab T, Powell BH, Pletniková O, Troncoso JC, Zheng L, Hill AF, Mahairaki V, Witwer KW Journal of Alzheimer's disease : JAD 36213994 J Alzheimers Dis 2022
Urinary extracellular vesicles contain mature transcriptome enriched in circular and long noncoding RNAs with functional significance in prostate cancer. Almeida A, Gabriel M, Firlej V, Martin-Jaular L, Lejars M, Cipolla R, Petit F, Vogt N, San-Roman M, Dingli F, Loew D, Destouches D, Vacherot F, de la Taille A, Théry C, Morillon A Journal of extracellular vesicles 35527349 J Extracell Vesicles 2022 May
Non-Invasive imaging of extracellular vesicles: Quo vaditis in vivo? Arifin DR, Witwer KW, Bulte JWM Journal of extracellular vesicles 35844061 J Extracell Vesicles 2022 Jul
Unraveling multilayered extracellular vesicles: Speculation on cause. Broad K, Walker SA, Davidovich I, Witwer K, Talmon Y, Wolfram J Journal of extracellular vesicles 36732941 J Extracell Vesicles 2023 Feb
RI-SEC-seq: Comprehensive Profiling of Nonvesicular Extracellular RNAs with Different Stabilities. Tosar JP, Gámbaro F, Castellano M, Cayota A Bio-protocol 33732805 Bio Protoc 2021 Feb 20
The power of imaging to understand extracellular vesicle biology in vivo. Verweij FJ, Balaj L, Boulanger CM, Carter DRF, Compeer EB, D'Angelo G, El Andaloussi S, Goetz JG, Gross JC, Hyenne V, Krämer-Albers EM, Lai CP, Loyer X, Marki A, Momma S, Nolte-'t Hoen ENM, Pegtel DM, Peinado H, Raposo G, Rilla K, Tahara H, Théry C, van Royen ME, Vandenbroucke RE, Wehman AM, Witwer K, Wu Z, Wubbolts R, van Niel G Nature methods 34446922 Nat Methods 2021 Sep
Unbiased proteomic profiling of host cell extracellular vesicle composition and dynamics upon HIV-1 infection. Martin-Jaular L, Nevo N, Schessner JP, Tkach M, Jouve M, Dingli F, Loew D, Witwer KW, Ostrowski M, Borner GHH, Théry C The EMBO journal 33709510 EMBO J 2021 Apr 15
Influence of species and processing parameters on recovery and content of brain tissue-derived extracellular vesicles. Huang Y, Cheng L, Turchinovich A, Mahairaki V, Troncoso JC, Pletniková O, Haughey NJ, Vella LJ, Hill AF, Zheng L, Witwer KW Journal of extracellular vesicles 32944174 J Extracell Vesicles 2020 Jun 30
RNA Landscapes of Brain and Brain-Derived Extracellular Vesicles in Simian Immunodeficiency Virus Infection and Central Nervous System Pathology. Huang Y, Abdelgawad A, Turchinovich A, Queen S, Abreu CM, Zhu X, Batish M, Zheng L, Witwer KW The Journal of infectious diseases 38079216 J Infect Dis 2024 May 15
Urinary extracellular vesicle-derived miR-126-3p predicts lymph node invasion in patients with high-risk prostate cancer. Dong L, Hu C, Ma Z, Huang Y, Shelley G, Kuczler MD, Kim CJ, Witwer KW, Keller ET, Amend SR, Xue W, Pienta KJ Research square 38585988 Res Sq 2024 Mar 29
Relationships of APOE Genotypes With Small RNA and Protein Cargo of Brain Tissue Extracellular Vesicles From Patients With Late-Stage AD. Huang Y, Driedonks TAP, Cheng L, Rajapaksha H, Turchinovich A, Routenberg DA, Nagaraj R, Redding-Ochoa J, Arab T, Powell BH, Pletnikova O, Troncoso JC, Zheng L, Hill AF, Mahairaki V, Witwer KW Neurology. Genetics 36405397 Neurol Genet 2022 Dec
RNA landscapes of brain tissue and brain tissue-derived extracellular vesicles in simian immunodeficiency virus (SIV) infection and SIV-related central nervous system pathology. Huang Y, Abdelgawad A, Turchinovich A, Queen S, Abreu CM, Zhu X, Batish M, Zheng L, Witwer KW bioRxiv : the preprint server for biology 37034720 bioRxiv 2023 Apr 29
ELISA-based detection of immunoglobulins against extracellular vesicles in blood plasma. Driedonks TAP, Jiang L, Gololobova O, Liao Z, Witwer KW Journal of extracellular biology 38939411 J Extracell Biol 2024 Mar
Viral and host small RNA transcriptome analysis of SARS-CoV-1 and SARS-CoV-2-infected human cells reveals novel viral short RNAs. Driedonks TAP, Nyberg LH, Conte A, Ma Z, Pekosz A, Duban E, Tonevitsky A, Sültmann H, Turchinovich A, Witwer KW Heliyon 38314306 Heliyon 2024 Feb 15
Precision Nutrition and Cardiovascular Disease Risk Reduction: the Promise of High-Density Lipoproteins. Hong BV, Agus JK, Tang X, Zheng JJ, Romo EZ, Lei S, Zivkovic AM Current atherosclerosis reports 37702886 Curr Atheroscler Rep 2023 Oct
Minimal information for studies of extracellular vesicles (MISEV2023): From basic to advanced approaches. Welsh JA, Goberdhan DCI, O'Driscoll L, Buzas EI, Blenkiron C, Bussolati B, Cai H, Di Vizio D, Driedonks TAP, Erdbrügger U, Falcon-Perez JM, Fu QL, Hill AF, Lenassi M, Lim SK, Mahoney MG, Mohanty S, Möller A, Nieuwland R, Ochiya T, Sahoo S, Torrecilhas AC, Zheng L, Zijlstra A, Abuelreich S, Bagabas R, Bergese P, Bridges EM, Brucale M, Burger D, Carney RP, Cocucci E, Crescitelli R, Hanser E, Harris AL, Haughey NJ, Hendrix A, Ivanov AR, Jovanovic-Talisman T, Kruh-Garcia NA, Ku'ulei-Lyn Faustino V, Kyburz D, Lässer C, Lennon KM, Lötvall J, Maddox AL, Martens-Uzunova ES, Mizenko RR, Newman LA, Ridolfi A, Rohde E, Rojalin T, Rowland A, Saftics A, Sandau US, Saugstad JA, Shekari F, Swift S, Ter-Ovanesyan D, Tosar JP, Useckaite Z, Valle F, Varga Z, van der Pol E, van Herwijnen MJC, Wauben MHM, Wehman AM, Williams S, Zendrini A, Zimmerman AJ, MISEV Consortium, Théry C, Witwer KW Journal of extracellular vesicles 38326288 J Extracell Vesicles 2024 Feb
Urinary extracellular vesicle-derived miR-126-3p predicts lymph node invasion in patients with high-risk prostate cancer. Dong L, Hu C, Ma Z, Huang Y, Shelley G, Kuczler MD, Kim CJ, Witwer KW, Keller ET, Amend SR, Xue W, Pienta KJ Medical oncology (Northwood, London, England) 38839666 Med Oncol 2024 Jun 5
Exploring the adhesion properties of extracellular vesicles for functional assays. Pachane BC, Carlson B, Queen SE, Selistre-de-Araujo HS, Witwer KW bioRxiv : the preprint server for biology 39553976 bioRxiv 2024 Oct 30
The D614G Mutation Enhances the Lysosomal Trafficking of SARS-CoV-2 Spike. Guo C, Tsai SJ, Ai Y, Li M, Pekosz A, Cox A, Atai N, Gould SJ bioRxiv : the preprint server for biology 33330866 bioRxiv 2020 Dec 9
Identification of optimal conditions for human placental explant culture and extracellular vesicle release. Tekkatte C, Lindsay SA, Duggan E, Castro-Martínez A, Hakim A, Saldana I, Zhang Y, Zhou J, Sebastian R, Liu Y, Pontigon DS, Meads M, Liu TN, Pizzo DP, Nolan J, Parast MM, Laurent LC iScience 37829201 iScience 2023 Oct 20
The D614G mutation redirects SARS-CoV-2 spike to lysosomes and suppresses deleterious traits of the furin cleavage site insertion mutation. Guo C, Tsai SJ, Ai Y, Li M, Anaya E, Pekosz A, Cox A, Gould SJ Science advances 36563151 Sci Adv 2022 Dec 23
A shared, stochastic pathway mediates exosome protein budding along plasma and endosome membranes. Fordjour FK, Guo C, Ai Y, Daaboul GG, Gould SJ The Journal of biological chemistry 35988652 J Biol Chem 2022 Oct
Degron tagging of BleoR and other antibiotic-resistance genes selects for higher expression of linked transgenes and improved exosome engineering. Tsai SJ, Ai Y, Guo C, Gould SJ The Journal of biological chemistry 35314197 J Biol Chem 2022 May
Antigen-display exosomes provide adjuvant-free protection against SARS-CoV-2 disease at nanogram levels of spike protein. Guo C, Sachithanandham J, Zhong W, Craney M, Villano J, Pekosz A, Gould SJ bioRxiv : the preprint server for biology 38328234 bioRxiv 2024 Jan 5
Macrophage Polarizations in the Placenta and Lung are Associated with Bronchopulmonary Dysplasia. Mestan KK, Sharma A, Lazar S, Pandey S, Parast MM, Laurent LC, Prince LS, Sahoo D bioRxiv : the preprint server for biology 38352616 bioRxiv 2024 Jan 30
Are Supermeres a Distinct Nanoparticle? Jeppesen DK, Zhang Q, Franklin JL, Coffey RJ Journal of extracellular biology 36311879 J Extracell Biol 2022 Jun
Depletion of METTL3 alters cellular and extracellular levels of miRNAs containing m(6)A consensus sequences. Abner JJ, Franklin JL, Clement MA, Hinger SA, Allen RM, Liu X, Kellner S, Wu J, Karijolich J, Liu Q, Vickers KC, Dedon P, Weaver AM, Coffey RJ, Patton JG Heliyon 34934837 Heliyon 2021 Dec
Reassessment of Exosome Composition. Jeppesen DK, Fenix AM, Franklin JL, Higginbotham JN, Zhang Q, Zimmerman LJ, Liebler DC, Ping J, Liu Q, Evans R, Fissell WH, Patton JG, Rome LH, Burnette DT, Coffey RJ Cell 30951670 Cell 2019 Apr 4
Experimental and Biological Insights from Proteomic Analyses of Extracellular Vesicle Cargos in Normalcy and Disease. Charest A Advanced biosystems 32815324 Adv Biosyst 2020 Dec
Comprehensive isolation of extracellular vesicles and nanoparticles. Zhang Q, Jeppesen DK, Higginbotham JN, Franklin JL, Coffey RJ Nature protocols 36914899 Nat Protoc 2023 May
miR-100 and miR-125b Contribute to Enhanced 3D Growth and Invasiveness and can be Functionally Transferred to Silence Target Genes in Recipient Cells. Nelson HM, Qu S, Huang L, Shameer M, Corn KC, Chapman SN, Luthcke NL, Schuster SA, Turnbull LA, Guy LL, Liu X, Vickers KC, Liu Q, Franklin JL, Weaver AM, Rafat M, Coffey RJ, Patton JG bioRxiv : the preprint server for biology 38826470 bioRxiv 2024 May 22
Emerging connections between GPI-anchored proteins and their extracellular carriers in colorectal cancer. Tutanov OS, Glass SE, Coffey RJ Extracellular vesicles and circulating nucleic acids 37840781 Extracell Vesicles Circ Nucl Acids 2023 Jun
Glioblastoma-Derived Extracellular Vesicles Facilitate Transformation of Astrocytes via Reprogramming Oncogenic Metabolism. Zeng A, Wei Z, Rabinovsky R, Jun HJ, El Fatimy R, Deforzh E, Arora R, Yao Y, Yao S, Yan W, Uhlmann EJ, Charest A, You Y, Krichevsky AM iScience 32795915 iScience 2020 Aug 21
Transfer of Functional Cargo in Exomeres. Zhang Q, Higginbotham JN, Jeppesen DK, Yang YP, Li W, McKinley ET, Graves-Deal R, Ping J, Britain CM, Dorsett KA, Hartman CL, Ford DA, Allen RM, Vickers KC, Liu Q, Franklin JL, Bellis SL, Coffey RJ Cell reports 30956133 Cell Rep 2019 Apr 16
Elucidation of physico-chemical principles of high-density lipoprotein-small RNA binding interactions. Michell DL, Allen RM, Cavnar AB, Contreras DM, Yu M, Semler EM, Massick C, Raby CA, Castleberry M, Ramirez MA, Zhu W, May-Zhang L, Ifrim A, Carr JJ, Terry JG, Schwendeman A, Davies SS, Sheng Q, Linton MF, Vickers KC The Journal of biological chemistry 35447119 J Biol Chem 2022 Jun
Recent Advances in the Study of Extracellular Vesicles in Colorectal Cancer. Glass SE, Coffey RJ Gastroenterology 35724732 Gastroenterology 2022 Nov
Extracellular vesicles and nanoparticles: emerging complexities. Jeppesen DK, Zhang Q, Franklin JL, Coffey RJ Trends in cell biology 36737375 Trends Cell Biol 2023 Aug
5-Fluorouracil treatment represses pseudouridine-containing miRNA export into extracellular vesicles. Qu S, Nelson HM, Liu X, Wang Y, Semler EM, Michell DL, Massick C, Franklin JL, Karijolich J, Weaver AM, Coffey RJ, Liu Q, Vickers KC, Patton JG Journal of extracellular biology 39281020 J Extracell Biol 2024 Sep
Transfer of miR-100 and miR-125b increases 3D growth and invasiveness in recipient cancer cells. Nelson HM, Qu S, Huang L, Shameer M, Corn KC, Chapman SN, Luthcke NL, Schuster SA, Stamaris TD, Turnbull LA, Guy LL, Liu X, Michell DL, Semler EM, Vickers KC, Liu Q, Franklin JL, Weaver AM, Rafat M, Coffey RJ, Patton JG Extracellular vesicles and circulating nucleic acids 39697634 Extracell Vesicles Circ Nucl Acids 2024
Angiotensin-converting Enzyme 2-containing Small Extracellular Vesicles and Exomeres Bind the Severe Acute Respiratory Syndrome Coronavirus 2 Spike Protein. Zhang Q, Jeppesen DK, Higginbotham JN, Franklin JL, Crowe JE Jr, Coffey RJ Gastroenterology 33022277 Gastroenterology 2021 Feb
Systematic Assessment of Small RNA Profiling in Human Extracellular Vesicles. Wang J, Chen HC, Sheng Q, Dawson TR, Coffey RJ, Patton JG, Weaver AM, Shyr Y, Liu Q Cancers 37444556 Cancers (Basel) 2023 Jun 30
EVPsort: An Atlas of Small ncRNA Profiling and Sorting in Extracellular Vesicles and Particles. Chen HC, Wang J, Coffey RJ, Patton JG, Weaver AM, Shyr Y, Liu Q Journal of molecular biology 38604528 J Mol Biol 2024 Sep 1
Extracellular RNA in oncogenesis, metastasis and drug resistance. Nelson H, Qu S, Franklin JL, Liu Q, Pua HH, Vickers KC, Weaver AM, Coffey RJ, Patton JG RNA biology 39107918 RNA Biol 2024 Jan
[(18)F]-fluoroethyl-L-tyrosine (FET) in glioblastoma (FIG) TROG 18.06 study: protocol for a prospective, multicentre PET/CT trial. Koh ES, Gan HK, Senko C, Francis RJ, Ebert M, Lee ST, Lau E, Khasraw M, Nowak AK, Bailey DL, Moffat BA, Fitt G, Hicks RJ, Coffey R, Verhaak R, Walsh KM, Barnes EH, De Abreu Lourenco R, Rosenthal M, Adda L, Foroudi F, Lasocki A, Moore A, Thomas PA, Roach P, Back M, Leonard R, Scott AM BMJ open 37541751 BMJ Open 2023 Aug 4
Anapole-Assisted Low-Power Optical Trapping of Nanoscale Extracellular Vesicles and Particles. Hong I, Hong C, Tutanov OS, Massick C, Castleberry M, Zhang Q, Jeppesen DK, Higginbotham JN, Franklin JL, Vickers K, Coffey RJ, Ndukaife JC Nano letters 37552655 Nano Lett 2023 Aug 23
Characterization of plasma-derived protoporphyrin-IX-positive extracellular vesicles following 5-ALA use in patients with malignant glioma. Jones PS, Yekula A, Lansbury E, Small JL, Ayinon C, Mordecai S, Hochberg FH, Tigges J, Delcuze B, Charest A, Ghiran I, Balaj L, Carter BS EBioMedicine 31628025 EBioMedicine 2019 Oct
High-density lipoproteins mediate small RNA intercellular communication between dendritic cells and macrophages. Castleberry M, Raby CA, Ifrim A, Shibata Y, Matsushita S, Ugawa S, Miura Y, Hori A, Miida T, Linton MF, Michell DL, Tsujita M, Vickers KC Journal of lipid research 36626966 J Lipid Res 2023 Feb
Supermeres are functional extracellular nanoparticles replete with disease biomarkers and therapeutic targets. Zhang Q, Jeppesen DK, Higginbotham JN, Graves-Deal R, Trinh VQ, Ramirez MA, Sohn Y, Neininger AC, Taneja N, McKinley ET, Niitsu H, Cao Z, Evans R, Glass SE, Ray KC, Fissell WH, Hill S, Rose KL, Huh WJ, Washington MK, Ayers GD, Burnette DT, Sharma S, Rome LH, Franklin JL, Lee YA, Liu Q, Coffey RJ Nature cell biology 34887515 Nat Cell Biol 2021 Dec
An anion exchange membrane sensor detects EGFR and its activity state in plasma CD63 extracellular vesicles from patients with glioblastoma. Maniya NH, Kumar S, Franklin JL, Higginbotham JN, Scott AM, Gan HK, Coffey RJ, Senapati S, Chang HC Communications biology 38830977 Commun Biol 2024 Jun 3
An integrated ion-exchange membrane-based microfluidic device for irreversible dissociation and quantification of miRNA from ribonucleoproteins. McCarthy KP, Go DB, Senapati S, Chang HC Lab on a chip 36524732 Lab Chip 2023 Jan 17
Electrodeposited magnetic nanoporous membrane for high-yield and high-throughput immunocapture of extracellular vesicles and lipoproteins. Zhang C, Huo X, Zhu Y, Higginbotham JN, Cao Z, Lu X, Franklin JL, Vickers KC, Coffey RJ, Senapati S, Wang C, Chang HC Communications biology 36496485 Commun Biol 2022 Dec 10
Liquid biopsy technologies based on membrane microfluidics: High-yield purification and selective quantification of biomarkers in nanocarriers. Wang C, Senapati S, Chang HC Electrophoresis 32180242 Electrophoresis 2020 Nov
Slowing down DNA translocation through solid-state nanopores by edge-field leakage. Wang C, Sensale S, Pan Z, Senapati S, Chang HC Nature communications 33420061 Nat Commun 2021 Jan 8
Nanoparticle-assisted detection of nucleic acids in a polymeric nanopore with a large pore size. Zhang Y, Chen X, Wang C, Chang HC, Guan X Biosensors & bioelectronics 34649096 Biosens Bioelectron 2022 Jan 15
Extracellular vesicle and lipoprotein diagnostics (ExoLP-Dx) with membrane sensor: A robust microfluidic platform to overcome heterogeneity. Kumar S, Senapati S, Chang HC Biomicrofluidics 39056024 Biomicrofluidics 2024 Jul
Elliptical Pipette Generated Large Microdroplets for POC Visual ddPCR Quantification of Low Viral Load. Chen L, Yadav V, Zhang C, Huo X, Wang C, Senapati S, Chang HC Analytical chemistry 33861566 Anal Chem 2021 Apr 27
Extracellular Vesicles: Biological Packages That Modulate Tumor Cell Invasion. Schmidtmann M, D'Souza-Schorey C Cancers 38067320 Cancers (Basel) 2023 Nov 28
A Scalable High-Throughput Isoelectric Fractionation Platform for Extracellular Nanocarriers: Comprehensive and Bias-Free Isolation of Ribonucleoproteins from Plasma, Urine, and Saliva. Sharma H, Yadav V, D'Souza-Schorey C, Go DB, Senapati S, Chang HC ACS nano 37071723 ACS Nano 2023 May 23
Recruitment of DNA to tumor-derived microvesicles. Clancy JW, Sheehan CS, Boomgarden AC, D'Souza-Schorey C Cell reports 35235806 Cell Rep 2022 Mar 1
A home-made pipette droplet microfluidics rapid prototyping and training kit for digital PCR, microorganism/cell encapsulation and controlled microgel synthesis. Chen L, Zhang C, Yadav V, Wong A, Senapati S, Chang HC Scientific reports 36604528 Sci Rep 2023 Jan 5
Concentration-Gradient Stabilization with Segregated Counter- and Co-Ion Paths: A Quasistationary Depletion Front for Robust Molecular Isolation or Concentration. Sun G, Pan Z, Senapati S, Chang HC Physical review applied 36936449 Phys Rev Appl 2017 Jun
Quantifying PON1 on HDL with nanoparticle-gated electrokinetic membrane sensor for accurate cardiovascular risk assessment. Kumar S, Maniya N, Wang C, Senapati S, Chang HC Nature communications 36732521 Nat Commun 2023 Feb 2
Chiral Graphene Quantum Dots Enhanced Drug Loading into Small Extracellular Vesicles. Zhang Y, Kim G, Zhu Y, Wang C, Zhu R, Lu X, Chang HC, Wang Y ACS nano 37127891 ACS Nano 2023 Jun 13
A Mem-dELISA platform for dual color and ultrasensitive digital detection of colocalized proteins on extracellular vesicles. Sharma H, Yadav V, Burchett A, Shi T, Senapati S, Datta M, Chang HC Biosensors & bioelectronics 39413723 Biosens Bioelectron 2025 Jan 1
CTD: An information-theoretic algorithm to interpret sets of metabolomic and transcriptomic perturbations in the context of graphical models. Thistlethwaite LR, Petrosyan V, Li X, Miller MJ, Elsea SH, Milosavljevic A PLoS computational biology 33513132 PLoS Comput Biol 2021 Jan
ApoE Modifier Alleles for Alzheimer's Disease Discovered by Information Theory Dependency Measures: MIST Software Package. Banman A, Sakhanenko NA, Kunert-Graf J, Galas DJ Journal of computational biology : a journal of computational molecular cell biology 36322888 J Comput Biol 2023 Mar
Glioma-Derived miRNA-Containing Extracellular Vesicles Induce Angiogenesis by Reprogramming Brain Endothelial Cells. Lucero R, Zappulli V, Sammarco A, Murillo OD, Cheah PS, Srinivasan S, Tai E, Ting DT, Wei Z, Roth ME, Laurent LC, Krichevsky AM, Breakefield XO, Milosavljevic A Cell reports 32075753 Cell Rep 2020 Feb 18
Correction: CTD: An information-theoretic algorithm to interpret sets of metabolomic and transcriptomic perturbations in the context of graphical models. Thistlethwaite LR, Petrosyan V, Li X, Miller MJ, Elsea SH, Milosavljevic A PLoS computational biology 34695129 PLoS Comput Biol 2021 Oct
Testicular germ cell tumors arise in the absence of sex-specific differentiation. Webster NJ, Maywald RL, Benton SM, Dawson EP, Murillo OD, LaPlante EL, Milosavljevic A, Lanza DG, Heaney JD Development (Cambridge, England) 33912935 Development 2021 May 1
Open Problems in Extracellular RNA Data Analysis: Insights From an ERCC Online Workshop. Alexander RP, Kitchen RR, Tosar JP, Roth M, Mestdagh P, Max KEA, Rozowsky J, Kaczor-Urbanowicz KE, Chang J, Balaj L, Losic B, Van Nostrand EL, LaPlante E, Mateescu B, White BS, Yu R, Milosavljevic A, Stolovitzky G, Spengler RM Frontiers in genetics 35047007 Front Genet 2021
Diagnostic and therapeutic potentials of exosomes in CNS diseases. Kawikova I, Askenase PW Brain research 25304360 Brain Res 2015 Aug 18
ExoCarta: A Web-Based Compendium of Exosomal Cargo. Keerthikumar S, Chisanga D, Ariyaratne D, Al Saffar H, Anand S, Zhao K, Samuel M, Pathan M, Jois M, Chilamkurti N, Gangoda L, Mathivanan S Journal of molecular biology 26434508 J Mol Biol 2016 Feb 22
Free Extracellular miRNA Functionally Targets Cells by Transfecting Exosomes from Their Companion Cells. Bryniarski K, Ptak W, Martin E, Nazimek K, Szczepanik M, Sanak M, Askenase PW PloS one 25923429 PLoS One 2015
A novel community driven software for functional enrichment analysis of extracellular vesicles data. Pathan M, Keerthikumar S, Chisanga D, Alessandro R, Ang CS, Askenase P, Batagov AO, Benito-Martin A, Camussi G, Clayton A, Collino F, Di Vizio D, Falcon-Perez JM, Fonseca P, Fonseka P, Fontana S, Gho YS, Hendrix A, Hoen EN, Iraci N, Kastaniegaard K, Kislinger T, Kowal J, Kurochkin IV, Leonardi T, Liang Y, Llorente A, Lunavat TR, Maji S, Monteleone F, Øverbye A, Panaretakis T, Patel T, Peinado H, Pluchino S, Principe S, Ronquist G, Royo F, Sahoo S, Spinelli C, Stensballe A, Théry C, van Herwijnen MJC, Wauben M, Welton JL, Zhao K, Mathivanan S Journal of extracellular vesicles 28717418 J Extracell Vesicles 2017
WikiGenomes: an open web application for community consumption and curation of gene annotation data in Wikidata. Putman TE, Lelong S, Burgstaller-Muehlbacher S, Waagmeester A, Diesh C, Dunn N, Munoz-Torres M, Stupp GS, Wu C, Su AI, Good BM Database : the journal of biological databases and curation 28365742 Database (Oxford) 2017 Jan 1
Expression of activation-induced cytidine deaminase enhances the clearance of pneumococcal pneumonia: evidence of a subpopulation of protective anti-pneumococcal B1a cells. Yamamoto N, Kerfoot SM, Hutchinson AT, Dela Cruz CS, Nakazawa N, Szczepanik M, Majewska-Szczepanik M, Nazimek K, Ohana N, Bryniarski K, Mori T, Muramatsu M, Kanemitsu K, Askenase PW Immunology 26456931 Immunology 2016 Jan
Identifying Allosteric Hotspots with Dynamics: Application to Inter- and Intra-species Conservation. Clarke D, Sethi A, Li S, Kumar S, Chang RWF, Chen J, Gerstein M Structure (London, England : 1993) 27066750 Structure 2016 May 3
The RNA Complement of Outer Membrane Vesicles From Salmonella enterica Serovar Typhimurium Under Distinct Culture Conditions. Malabirade A, Habier J, Heintz-Buschart A, May P, Godet J, Halder R, Etheridge A, Galas D, Wilmes P, Fritz JV Frontiers in microbiology 30214435 Front Microbiol 2018
Identifying biomarkers of differential chemotherapy response in TNBC patient-derived xenografts with a CTD/WGCNA approach. Petrosyan V, Dobrolecki LE, Thistlethwaite L, Lewis AN, Sallas C, Srinivasan RR, Lei JT, Kovacevic V, Obradovic P, Ellis MJ, Osborne CK, Rimawi MF, Pavlick A, Shafaee MN, Dowst H, Jain A, Saltzman AB, Malovannaya A, Marangoni E, Welm AL, Welm BE, Li S, Wulf GM, Sonzogni O, Huang C, Vasaikar S, Hilsenbeck SG, Zhang B, Milosavljevic A, Lewis MT iScience 36619972 iScience 2023 Jan 20
Extracellular vesicles containing oncogenic mutant β-catenin activate Wnt signalling pathway in the recipient cells. Kalra H, Gangoda L, Fonseka P, Chitti SV, Liem M, Keerthikumar S, Samuel M, Boukouris S, Al Saffar H, Collins C, Adda CG, Ang CS, Mathivanan S Journal of extracellular vesicles 31819794 J Extracell Vesicles 2019
Quantification of private information leakage from phenotype-genotype data: linking attacks. Harmanci A, Gerstein M Nature methods 26828419 Nat Methods 2016 Mar
A subset of AID-dependent B-1a cells initiates hypersensitivity and pneumococcal pneumonia resistance. Askenase PW, Bryniarski K, Paliwal V, Redegeld F, Groot Kormelink T, Kerfoot S, Hutchinson AT, van Loveren H, Campos R, Itakura A, Majewska-Szczepanik M, Yamamoto N, Nazimek K, Szczepanik M, Ptak W Annals of the New York Academy of Sciences 26662721 Ann N Y Acad Sci 2015 Dec
Extracellular vesicles including exosomes are mediators of signal transduction: are they protective or pathogenic? Gangoda L, Boukouris S, Liem M, Kalra H, Mathivanan S Proteomics 25307053 Proteomics 2015 Jan
Functions of Exosomes and Microbial Extracellular Vesicles in Allergy and Contact and Delayed-Type Hypersensitivity. Nazimek K, Bryniarski K, Askenase PW International archives of allergy and immunology 27820941 Int Arch Allergy Immunol 2016
Centralizing content and distributing labor: a community model for curating the very long tail of microbial genomes. Putman TE, Burgstaller-Muehlbacher S, Waagmeester A, Wu C, Su AI, Good BM Database : the journal of biological databases and curation 27022157 Database (Oxford) 2016
Cross-Disciplinary Network Comparison: Matchmaking Between Hairballs. Yan KK, Wang D, Sethi A, Muir P, Kitchen R, Cheng C, Gerstein M Cell systems 27047991 Cell Syst 2016 Mar 23
Genome-wide Profiling of Urinary Extracellular Vesicle microRNAs Associated With Diabetic Nephropathy in Type 1 Diabetes. Ghai V, Wu X, Bheda-Malge A, Argyropoulos CP, Bernardo JF, Orchard T, Galas D, Wang K Kidney international reports 29854963 Kidney Int Rep 2018 May
exceRpt: A Comprehensive Analytic Platform for Extracellular RNA Profiling. Rozowsky J, Kitchen RR, Park JJ, Galeev TR, Diao J, Warrell J, Thistlethwaite W, Subramanian SL, Milosavljevic A, Gerstein M Cell systems 30956140 Cell Syst 2019 Apr 24
WikiPathways App for Cytoscape: Making biological pathways amenable to network analysis and visualization. Kutmon M, Lotia S, Evelo CT, Pico AR F1000Research 25254103 F1000Res 2014
WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research. Slenter DN, Kutmon M, Hanspers K, Riutta A, Windsor J, Nunes N, Mélius J, Cirillo E, Coort SL, Digles D, Ehrhart F, Giesbertz P, Kalafati M, Martens M, Miller R, Nishida K, Rieswijk L, Waagmeester A, Eijssen LMT, Evelo CT, Pico AR, Willighagen EL Nucleic acids research 29136241 Nucleic Acids Res 2018 Jan 4
Histoepigenetic analysis of HPV- and tobacco-associated head and neck cancer identifies both subtype-specific and common therapeutic targets despite divergent microenvironments. Carrero I, Liu HC, Sikora AG, Milosavljevic A Oncogene 30655605 Oncogene 2019 May
Exosomes in bodily fluids are a highly stable resource of disease biomarkers. Boukouris S, Mathivanan S Proteomics. Clinical applications 25684126 Proteomics Clin Appl 2015 Apr
Sources and Functions of Extracellular Small RNAs in Human Circulation. Fritz JV, Heintz-Buschart A, Ghosal A, Wampach L, Etheridge A, Galas D, Wilmes P Annual review of nutrition 27215587 Annu Rev Nutr 2016 Jul 17
Wikidata as a semantic framework for the Gene Wiki initiative. Burgstaller-Muehlbacher S, Waagmeester A, Mitraka E, Turner J, Putman T, Leong J, Naik C, Pavlidis P, Schriml L, Good BM, Su AI Database : the journal of biological databases and curation 26989148 Database (Oxford) 2016
Intravenously delivered mesenchymal stem cell-derived exosomes target M2-type macrophages in the injured spinal cord. Lankford KL, Arroyo EJ, Nazimek K, Bryniarski K, Askenase PW, Kocsis JD PloS one 29293592 PLoS One 2018
Deconvolution of cancer cell states by the XDec-SM method. Murillo OD, Petrosyan V, LaPlante EL, Dobrolecki LE, Lewis MT, Milosavljevic A PLoS computational biology 37578979 PLoS Comput Biol 2023 Aug
Differential expression of circulating microRNAs according to severity of colorectal neoplasia. Ho GYF, Jung HJ, Schoen RE, Wang T, Lin J, Williams Z, Weissfeld JL, Park JY, Loudig O, Suh Y Translational research : the journal of laboratory and clinical medicine 25770825 Transl Res 2015 Sep
Non-reversible tissue fixation retains extracellular vesicles for in situ imaging. Gupta MP, Tandalam S, Ostrager S, Lever AS, Fung AR, Hurley DD, Alegre GB, Espinal JE, Remmel HL, Mukherjee S, Levine BM, Robins RP, Molina H, Dill BD, Kenific CM, Tuschl T, Lyden D, D'Amico DJ, Pena JTG Nature methods 31712780 Nat Methods 2019 Dec
A rapid and simple bead-bashing-based method for genomic DNA extraction from mammalian tissue. Wei S, Levy B, Hoffman N, Cujar C, Rodney-Sandy R, Wapner R, D'Alton M, Williams Z BioTechniques 32054310 Biotechniques 2020 May
Structural basis of mRNA recognition and cleavage by toxin MazF and its regulation by antitoxin MazE in Bacillus subtilis. Simanshu DK, Yamaguchi Y, Park JH, Inouye M, Patel DJ Molecular cell 24120662 Mol Cell 2013 Nov 7
Structure-based mechanistic insights into catalysis by small self-cleaving ribozymes. Ren A, Micura R, Patel DJ Current opinion in chemical biology 29107885 Curr Opin Chem Biol 2017 Dec
Rapid Multiplex Small DNA Sequencing on the MinION Nanopore Sequencing Platform. Wei S, Weiss ZR, Williams Z G3 (Bethesda, Md.) 29540443 G3 (Bethesda) 2018 May 4
Rapid Short-Read Sequencing and Aneuploidy Detection Using MinION Nanopore Technology. Wei S, Williams Z Genetics 26500254 Genetics 2016 Jan
Comparative RNA-sequencing analysis of myocardial and circulating small RNAs in human heart failure and their utility as biomarkers. Akat KM, Moore-McGriff D, Morozov P, Brown M, Gogakos T, Correa Da Rosa J, Mihailovic A, Sauer M, Ji R, Ramarathnam A, Totary-Jain H, Williams Z, Tuschl T, Schulze PC Proceedings of the National Academy of Sciences of the United States of America 25012294 Proc Natl Acad Sci U S A 2014 Jul 29
Structure-based insights into self-cleavage by a four-way junctional twister-sister ribozyme. Zheng L, Mairhofer E, Teplova M, Zhang Y, Ma J, Patel DJ, Micura R, Ren A Nature communications 29081514 Nat Commun 2017 Oct 30
Dynamic genome-wide gene expression and immune cell composition in the developing human placenta. Suryawanshi H, Max K, Bogardus KA, Sopeyin A, Chang MS, Morozov P, Castano PM, Tuschl T, Williams Z Journal of reproductive immunology 35490534 J Reprod Immunol 2022 Jun
Endogenous retrotransposons cause catastrophic deoxyribonucleic acid damage in human trophoblasts. Mauro M, Wei S, Breborowicz A, Li X, Bognanni C, Fuller Z, Philipp T, McDonald T, Lattin MT, Williams Z F&S science 37225003 F S Sci 2023 Aug
In-line alignment and Mg²⁺ coordination at the cleavage site of the env22 twister ribozyme. Ren A, Košutić M, Rajashankar KR, Frener M, Santner T, Westhof E, Micura R, Patel DJ Nature communications 25410397 Nat Commun 2014 Nov 20
Structural basis for molecular discrimination by a 3',3'-cGAMP sensing riboswitch. Ren A, Wang XC, Kellenberger CA, Rajashankar KR, Jones RA, Hammond MC, Patel DJ Cell reports 25818298 Cell Rep 2015 Apr 7
Lowering the quantification limit of the QubitTM RNA HS assay using RNA spike-in. Li X, Ben-Dov IZ, Mauro M, Williams Z BMC molecular biology 25943882 BMC Mol Biol 2015 May 6
Global RNA Fold and Molecular Recognition for a pfl Riboswitch Bound to ZMP, a Master Regulator of One-Carbon Metabolism. Ren A, Rajashankar KR, Patel DJ Structure (London, England : 1993) 26118534 Structure 2015 Aug 4
The Conserved RNA Exonuclease Rexo5 Is Required for 3' End Maturation of 28S rRNA, 5S rRNA, and snoRNAs. Gerstberger S, Meyer C, Benjamin-Hong S, Rodriguez J, Briskin D, Bognanni C, Bogardus K, Steller H, Tuschl T Cell reports 29045842 Cell Rep 2017 Oct 17
The G3BP1-Family-USP10 Deubiquitinase Complex Rescues Ubiquitinated 40S Subunits of Ribosomes Stalled in Translation from Lysosomal Degradation. Meyer C, Garzia A, Morozov P, Molina H, Tuschl T Molecular cell 31981475 Mol Cell 2020 Mar 19
Human cGAS catalytic domain has an additional DNA-binding interface that enhances enzymatic activity and liquid-phase condensation. Xie W, Lama L, Adura C, Tomita D, Glickman JF, Tuschl T, Patel DJ Proceedings of the National Academy of Sciences of the United States of America 31142647 Proc Natl Acad Sci U S A 2019 Jun 11
c-di-AMP binds the ydaO riboswitch in two pseudo-symmetry-related pockets. Ren A, Patel DJ Nature chemical biology 25086509 Nat Chem Biol 2014 Sep
A Mini-Twister Variant and Impact of Residues/Cations on the Phosphodiester Cleavage of this Ribozyme Class. Košutić M, Neuner S, Ren A, Flür S, Wunderlich C, Mairhofer E, Vušurović N, Seikowski J, Breuker K, Höbartner C, Patel DJ, Kreutz C, Micura R Angewandte Chemie (International ed. in English) 26473980 Angew Chem Int Ed Engl 2015 Dec 7
International validation of a urinary biomarker panel for identification of active lupus nephritis in children. Smith EM, Jorgensen AL, Midgley A, Oni L, Goilav B, Putterman C, Wahezi D, Rubinstein T, Ekdawy D, Corkhill R, Jones CA, Marks SD, Newland P, Pilkington C, Tullus K, Beresford MW Pediatric nephrology (Berlin, Germany) 27590021 Pediatr Nephrol 2017 Feb
Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity. Jia N, Mo CY, Wang C, Eng ET, Marraffini LA, Patel DJ Molecular cell 30503773 Mol Cell 2019 Jan 17
A single-cell survey of the human first-trimester placenta and decidua. Suryawanshi H, Morozov P, Straus A, Sahasrabudhe N, Max KEA, Garzia A, Kustagi M, Tuschl T, Williams Z Science advances 30402542 Sci Adv 2018 Oct
Rapid preimplantation genetic screening using a handheld, nanopore-based DNA sequencer. Wei S, Weiss ZR, Gaur P, Forman E, Williams Z Fertility and sterility 30316437 Fertil Steril 2018 Oct
Type V CRISPR-Cas Cpf1 endonuclease employs a unique mechanism for crRNA-mediated target DNA recognition. Gao P, Yang H, Rajashankar KR, Huang Z, Patel DJ Cell research 27444870 Cell Res 2016 Aug
The nascent RNA binding complex SFiNX licenses piRNA-guided heterochromatin formation. Batki J, Schnabl J, Wang J, Handler D, Andreev VI, Stieger CE, Novatchkova M, Lampersberger L, Kauneckaite K, Xie W, Mechtler K, Patel DJ, Brennecke J Nature structural & molecular biology 31384064 Nat Struct Mol Biol 2019 Aug
Hatchet ribozyme structure and implications for cleavage mechanism. Zheng L, Falschlunger C, Huang K, Mairhofer E, Yuan S, Wang J, Patel DJ, Micura R, Ren A Proceedings of the National Academy of Sciences of the United States of America 31088965 Proc Natl Acad Sci U S A 2019 May 28
Pistol ribozyme adopts a pseudoknot fold facilitating site-specific in-line cleavage. Ren A, Vušurović N, Gebetsberger J, Gao P, Juen M, Kreutz C, Micura R, Patel DJ Nature chemical biology 27398999 Nat Chem Biol 2016 Sep
Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch. Ren A, Xue Y, Peselis A, Serganov A, Al-Hashimi HM, Patel DJ Cell reports 26655897 Cell Rep 2015 Dec 1
Microfluidic platform to evaluate migration of cells from patients with DYT1 dystonia. Nery FC, Atai NA, da Hora CC, Kim EY, Hettich J, Mempel TR, Breakefield XO, Irimia D Journal of neuroscience methods 24880044 J Neurosci Methods 2014 Jul 30
Belonging to a network--microRNAs, extracellular vesicles, and the glioblastoma microenvironment. Godlewski J, Krichevsky AM, Johnson MD, Chiocca EA, Bronisz A Neuro-oncology 25301812 Neuro Oncol 2015 May
Glioblastoma hijacks microglial gene expression to support tumor growth. Maas SLN, Abels ER, Van De Haar LL, Zhang X, Morsett L, Sil S, Guedes J, Sen P, Prabhakar S, Hickman SE, Lai CP, Ting DT, Breakefield XO, Broekman MLD, El Khoury J Journal of neuroinflammation 32299465 J Neuroinflammation 2020 Apr 16
Chronic platelet-derived growth factor receptor signaling exerts control over initiation of protein translation in glioma. Zhou S, Appleman VA, Rose CM, Jun HJ, Yang J, Zhou Y, Bronson RT, Gygi SP, Charest A Life science alliance 30456354 Life Sci Alliance 2018 Jun
Inhibition of EGFR induces a c-MET-driven stem cell population in glioblastoma. Jun HJ, Bronson RT, Charest A Stem cells (Dayton, Ohio) 24115218 Stem Cells 2014 Feb
Dynamic biodistribution of extracellular vesicles in vivo using a multimodal imaging reporter. Lai CP, Mardini O, Ericsson M, Prabhakar S, Maguire C, Chen JW, Tannous BA, Breakefield XO ACS nano 24383518 ACS Nano 2014 Jan 28
Fetal Bovine Serum RNA Interferes with the Cell Culture derived Extracellular RNA. Wei Z, Batagov AO, Carter DR, Krichevsky AM Scientific reports 27503761 Sci Rep 2016 Aug 9
Engineered nanointerfaces for microfluidic isolation and molecular profiling of tumor-specific extracellular vesicles. Reátegui E, van der Vos KE, Lai CP, Zeinali M, Atai NA, Aldikacti B, Floyd FP Jr, H Khankhel A, Thapar V, Hochberg FH, Sequist LV, Nahed BV, S Carter B, Toner M, Balaj L, T Ting D, Breakefield XO, Stott SL Nature communications 29330365 Nat Commun 2018 Jan 12
Extracellular vesicles: emerging targets for cancer therapy. Vader P, Breakefield XO, Wood MJ Trends in molecular medicine 24703619 Trends Mol Med 2014 Jul
Coding and noncoding landscape of extracellular RNA released by human glioma stem cells. Wei Z, Batagov AO, Schinelli S, Wang J, Wang Y, El Fatimy R, Rabinovsky R, Balaj L, Chen CC, Hochberg F, Carter B, Breakefield XO, Krichevsky AM Nature communications 29074968 Nat Commun 2017 Oct 26
Introduction to Extracellular Vesicles: Biogenesis, RNA Cargo Selection, Content, Release, and Uptake. Abels ER, Breakefield XO Cellular and molecular neurobiology 27053351 Cell Mol Neurobiol 2016 Apr
Extracellular Vesicle-Mediated Bilateral Communication between Glioblastoma and Astrocytes. Nieland L, Morsett LM, Broekman MLD, Breakefield XO, Abels ER Trends in neurosciences 33234347 Trends Neurosci 2021 Mar
Secretion and Uptake of α-Synuclein Via Extracellular Vesicles in Cultured Cells. Gustafsson G, Lööv C, Persson E, Lázaro DF, Takeda S, Bergström J, Erlandsson A, Sehlin D, Balaj L, György B, Hallbeck M, Outeiro TF, Breakefield XO, Hyman BT, Ingelsson M Cellular and molecular neurobiology 30288631 Cell Mol Neurobiol 2018 Nov
Tumor Tolerance-Promoting Function of Regulatory T Cells Is Optimized by CD28, but Strictly Dependent on Calcineurin. Marangoni F, Zhang R, Mani V, Thelen M, Ali Akbar NJ, Warner RD, Äijö T, Zappulli V, Martinez GJ, Turka LA, Mempel TR Journal of immunology (Baltimore, Md. : 1950) 29661826 J Immunol 2018 May 15
Gene therapy for the nervous system: challenges and new strategies. Maguire CA, Ramirez SH, Merkel SF, Sena-Esteves M, Breakefield XO Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics 25159276 Neurotherapeutics 2014 Oct
Choice of selectable marker affects recombinant protein expression in cells and exosomes. Guo C, Fordjour FK, Tsai SJ, Morrell JC, Gould SJ The Journal of biological chemistry 34051235 J Biol Chem 2021 Jul
Role of exosomes/microvesicles in the nervous system and use in emerging therapies. Lai CP, Breakefield XO Frontiers in physiology 22754538 Front Physiol 2012
Directly visualized glioblastoma-derived extracellular vesicles transfer RNA to microglia/macrophages in the brain. van der Vos KE, Abels ER, Zhang X, Lai C, Carrizosa E, Oakley D, Prabhakar S, Mardini O, Crommentuijn MH, Skog J, Krichevsky AM, Stemmer-Rachamimov A, Mempel TR, El Khoury J, Hickman SE, Breakefield XO Neuro-oncology 26433199 Neuro Oncol 2016 Jan
Extracellular vesicles derived from human vestibular schwannomas associated with poor hearing damage cochlear cells. Soares VY, Atai NA, Fujita T, Dilwali S, Sivaraman S, Landegger LD, Hochberg FH, Oliveira CA, Bahmad F, Breakefield XO, Stankovic KM Neuro-oncology 27194145 Neuro Oncol 2016 Nov
Exosomes. Pegtel DM, Gould SJ Annual review of biochemistry 31220978 Annu Rev Biochem 2019 Jun 20
Physical and Molecular Landscapes of Mouse Glioma Extracellular Vesicles Define Heterogeneity. Gyuris A, Navarrete-Perea J, Jo A, Cristea S, Zhou S, Fraser K, Wei Z, Krichevsky AM, Weissleder R, Lee H, Gygi SP, Charest A Cell reports 31242427 Cell Rep 2019 Jun 25
Tracking Extracellular Vesicles Delivery and RNA Translation Using Multiplexed Reporters. Wu AY, Lai CP Methods in molecular biology (Clifton, N.J.) 28828663 Methods Mol Biol 2017
Extracellular RNA mediates and marks cancer progression. Redzic JS, Balaj L, van der Vos KE, Breakefield XO Seminars in cancer biology 24783980 Semin Cancer Biol 2014 Oct
Immune Checkpoint Blockade Biology in Mouse Models of Glioblastoma. Yeo AT, Charest A Journal of cellular biochemistry 28230277 J Cell Biochem 2017 Sep
Emerging roles of extracellular vesicles in the nervous system. Rajendran L, Bali J, Barr MM, Court FA, Krämer-Albers EM, Picou F, Raposo G, van der Vos KE, van Niel G, Wang J, Breakefield XO The Journal of neuroscience : the official journal of the Society for Neuroscience 25392515 J Neurosci 2014 Nov 12
Extracellular vesicles and intercellular communication within the nervous system. Zappulli V, Friis KP, Fitzpatrick Z, Maguire CA, Breakefield XO The Journal of clinical investigation 27035811 J Clin Invest 2016 Apr 1
Visualization and tracking of tumour extracellular vesicle delivery and RNA translation using multiplexed reporters. Lai CP, Kim EY, Badr CE, Weissleder R, Mempel TR, Tannous BA, Breakefield XO Nature communications 25967391 Nat Commun 2015 May 13
Multidimensional communication in the microenvirons of glioblastoma. Broekman ML, Maas SLN, Abels ER, Mempel TR, Krichevsky AM, Breakefield XO Nature reviews. Neurology 29985475 Nat Rev Neurol 2018 Aug
Co-cultures of Glioma Stem Cells and Primary Neurons, Astrocytes, Microglia, and Endothelial Cells for Investigation of Intercellular Communication in the Brain. Wei Z, Kale S, El Fatimy R, Rabinovsky R, Krichevsky AM Frontiers in neuroscience 31057356 Front Neurosci 2019
Advances in therapeutic applications of extracellular vesicles. Wiklander OPB, Brennan MÁ, Lötvall J, Breakefield XO, El Andaloussi S Science translational medicine 31092696 Sci Transl Med 2019 May 15
Oligonucleotide Therapeutics as a New Class of Drugs for Malignant Brain Tumors: Targeting mRNAs, Regulatory RNAs, Mutations, Combinations, and Beyond. Krichevsky AM, Uhlmann EJ Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics 30644073 Neurotherapeutics 2019 Apr
Therapeutic applications of extracellular vesicles: clinical promise and open questions. György B, Hung ME, Breakefield XO, Leonard JN Annual review of pharmacology and toxicology 25292428 Annu Rev Pharmacol Toxicol 2015
GlioM&M: Web-based tool for studying circulating and infiltrating monocytes and macrophages in glioma. Abels ER, Maas SLN, Tai E, Ting DT, Broekman MLD, Breakefield XO, El Khoury J Scientific reports 32555306 Sci Rep 2020 Jun 18
CRISPR/Cas9 Mediated Disruption of the Swedish APP Allele as a Therapeutic Approach for Early-Onset Alzheimer's Disease. György B, Lööv C, Zaborowski MP, Takeda S, Kleinstiver BP, Commins C, Kastanenka K, Mu D, Volak A, Giedraitis V, Lannfelt L, Maguire CA, Joung JK, Hyman BT, Breakefield XO, Ingelsson M Molecular therapy. Nucleic acids 29858078 Mol Ther Nucleic Acids 2018 Jun 1
New Technologies for Analysis of Extracellular Vesicles. Shao H, Im H, Castro CM, Breakefield X, Weissleder R, Lee H Chemical reviews 29384376 Chem Rev 2018 Feb 28
Immunotherapies for malignant glioma. Boussiotis VA, Charest A Oncogene 29242608 Oncogene 2018 Mar
Potential Transfer of Polyglutamine and CAG-Repeat RNA in Extracellular Vesicles in Huntington's Disease: Background and Evaluation in Cell Culture. Zhang X, Abels ER, Redzic JS, Margulis J, Finkbeiner S, Breakefield XO Cellular and molecular neurobiology 26951563 Cell Mol Neurobiol 2016 Apr
SCS macrophages suppress melanoma by restricting tumor-derived vesicle-B cell interactions. Pucci F, Garris C, Lai CP, Newton A, Pfirschke C, Engblom C, Alvarez D, Sprachman M, Evavold C, Magnuson A, von Andrian UH, Glatz K, Breakefield XO, Mempel TR, Weissleder R, Pittet MJ Science (New York, N.Y.) 26989197 Science 2016 Apr 8
Extracellular Vesicles: Composition, Biological Relevance, and Methods of Study. Zaborowski MP, Balaj L, Breakefield XO, Lai CP Bioscience 26955082 Bioscience 2015 Aug 1
Viral vectors for therapy of neurologic diseases. Choudhury SR, Hudry E, Maguire CA, Sena-Esteves M, Breakefield XO, Grandi P Neuropharmacology 26905292 Neuropharmacology 2017 Jul 1
Membrane-bound Gaussia luciferase as a tool to track shedding of membrane proteins from the surface of extracellular vesicles. Zaborowski MP, Cheah PS, Zhang X, Bushko I, Lee K, Sammarco A, Zappulli V, Maas SLN, Allen RM, Rumde P, György B, Aufiero M, Schweiger MW, Lai CP, Weissleder R, Lee H, Vickers KC, Tannous BA, Breakefield XO Scientific reports 31758005 Sci Rep 2019 Nov 22
Engineered EVs designed to target diseases of the CNS. Nieland L, Mahjoum S, Grandell E, Breyne K, Breakefield XO Journal of controlled release : official journal of the Controlled Release Society 36907561 J Control Release 2023 Apr
Roles of extracellular vesicles in glioblastoma: foes, friends and informers. Lunavat TR, Nieland L, Vrijmoet AB, Zargani-Piccardi A, Samaha Y, Breyne K, Breakefield XO Frontiers in oncology 38074665 Front Oncol 2023
Gene replacement therapy in a schwannoma mouse model of neurofibromatosis type 2. Prabhakar S, Beauchamp RL, Cheah PS, Yoshinaga A, Haidar EA, Lule S, Mani G, Maalouf K, Stemmer-Rachamimov A, Jung DH, Welling DB, Giovannini M, Plotkin SR, Maguire CA, Ramesh V, Breakefield XO Molecular therapy. Methods & clinical development 35846573 Mol Ther Methods Clin Dev 2022 Sep 8
CRISPR targeting of mmu-miR-21a through a single adeno-associated virus vector prolongs survival of glioblastoma-bearing mice. Nieland L, Vrijmoet AB, Jetten IW, Rufino-Ramos D, de Reus AJEM, Breyne K, Kleinstiver BP, Maguire CA, Broekman MLD, Breakefield XO, Abels ER Molecular therapy : the journal of the American Society of Gene Therapy 39563028 Mol Ther 2025 Jan 8
Chip-based analysis of exosomal mRNA mediating drug resistance in glioblastoma. Shao H, Chung J, Lee K, Balaj L, Min C, Carter BS, Hochberg FH, Breakefield XO, Lee H, Weissleder R Nature communications 25959588 Nat Commun 2015 May 11
Glioblastoma-Associated Microglia Reprogramming Is Mediated by Functional Transfer of Extracellular miR-21. Abels ER, Maas SLN, Nieland L, Wei Z, Cheah PS, Tai E, Kolsteeg CJ, Dusoswa SA, Ting DT, Hickman S, El Khoury J, Krichevsky AM, Broekman MLD, Breakefield XO Cell reports 31533034 Cell Rep 2019 Sep 17
CRISPR-Cas knockout of miR21 reduces glioma growth. Nieland L, van Solinge TS, Cheah PS, Morsett LM, El Khoury J, Rissman JI, Kleinstiver BP, Broekman MLD, Breakefield XO, Abels ER Molecular therapy oncolytics 35572197 Mol Ther Oncolytics 2022 Jun 16
A PDGFRα-driven mouse model of glioblastoma reveals a stathmin1-mediated mechanism of sensitivity to vinblastine. Jun HJ, Appleman VA, Wu HJ, Rose CM, Pineda JJ, Yeo AT, Delcuze B, Lee C, Gyuris A, Zhu H, Woolfenden S, Bronisz A, Nakano I, Chiocca EA, Bronson RT, Ligon KL, Sarkaria JN, Gygi SP, Michor F, Mitchison TJ, Charest A Nature communications 30082792 Nat Commun 2018 Aug 6
Methods for Systematic Identification of Membrane Proteins for Specific Capture of Cancer-Derived Extracellular Vesicles. Zaborowski MP, Lee K, Na YJ, Sammarco A, Zhang X, Iwanicki M, Cheah PS, Lin HY, Zinter M, Chou CY, Fulci G, Tannous BA, Lai CP, Birrer MJ, Weissleder R, Lee H, Breakefield XO Cell reports 30943406 Cell Rep 2019 Apr 2
HIV-1 Balances the Fitness Costs and Benefits of Disrupting the Host Cell Actin Cytoskeleton Early after Mucosal Transmission. Usmani SM, Murooka TT, Deruaz M, Koh WH, Sharaf RR, Di Pilato M, Power KA, Lopez P, Hnatiuk R, Vrbanac VD, Tager AM, Allen TM, Luster AD, Mempel TR Cell host & microbe 30629922 Cell Host Microbe 2019 Jan 9
Delivery of Therapeutic Proteins via Extracellular Vesicles: Review and Potential Treatments for Parkinson's Disease, Glioma, and Schwannoma. Hall J, Prabhakar S, Balaj L, Lai CP, Cerione RA, Breakefield XO Cellular and molecular neurobiology 27017608 Cell Mol Neurobiol 2016 Apr
The transcription factor NFAT promotes exhaustion of activated CD8⁺ T cells. Martinez GJ, Pereira RM, Äijö T, Kim EY, Marangoni F, Pipkin ME, Togher S, Heissmeyer V, Zhang YC, Crotty S, Lamperti ED, Ansel KM, Mempel TR, Lähdesmäki H, Hogan PG, Rao A Immunity 25680272 Immunity 2015 Feb 17
VAP-A and its binding partner CERT drive biogenesis of RNA-containing extracellular vesicles at ER membrane contact sites. Barman B, Sung BH, Krystofiak E, Ping J, Ramirez M, Millis B, Allen R, Prasad N, Chetyrkin S, Calcutt MW, Vickers K, Patton JG, Liu Q, Weaver AM Developmental cell 35421371 Dev Cell 2022 Apr 25
Biogenesis, delivery, and function of extracellular RNA. Patton JG, Franklin JL, Weaver AM, Vickers K, Zhang B, Coffey RJ, Ansel KM, Blelloch R, Goga A, Huang B, L'Etoille N, Raffai RL, Lai CP, Krichevsky AM, Mateescu B, Greiner VJ, Hunter C, Voinnet O, McManus MT Journal of extracellular vesicles 26320939 J Extracell Vesicles 2015
Extracellular Vesicles: Unique Intercellular Delivery Vehicles. Maas SLN, Breakefield XO, Weaver AM Trends in cell biology 27979573 Trends Cell Biol 2017 Mar
Interplay between miRNAs and host genes and their role in cancer. Liu B, Shyr Y, Cai J, Liu Q Briefings in functional genomics 30785618 Brief Funct Genomics 2018 Jul 22
beRBP: binding estimation for human RNA-binding proteins. Yu H, Wang J, Sheng Q, Liu Q, Shyr Y Nucleic acids research 30590704 Nucleic Acids Res 2019 Mar 18
A live cell reporter of exosome secretion and uptake reveals pathfinding behavior of migrating cells. Sung BH, von Lersner A, Guerrero J, Krystofiak ES, Inman D, Pelletier R, Zijlstra A, Ponik SM, Weaver AM Nature communications 32350252 Nat Commun 2020 Apr 29
Comprehensive evaluation of noise reduction methods for single-cell RNA sequencing data. Chu SK, Zhao S, Shyr Y, Liu Q Briefings in bioinformatics 35048125 Brief Bioinform 2022 Mar 10
Diverse Long RNAs Are Differentially Sorted into Extracellular Vesicles Secreted by Colorectal Cancer Cells. Hinger SA, Cha DJ, Franklin JL, Higginbotham JN, Dou Y, Ping J, Shu L, Prasad N, Levy S, Zhang B, Liu Q, Weaver AM, Coffey RJ, Patton JG Cell reports 30332650 Cell Rep 2018 Oct 16
Argonautes in Extracellular Vesicles: Artifact or Selected Cargo? Weaver AM, Patton JG Cancer research 31784424 Cancer Res 2020 Feb 1
KRAS Mutation-Responsive miR-139-5p inhibits Colorectal Cancer Progression and is repressed by Wnt Signaling. Du F, Cao T, Xie H, Li T, Sun L, Liu H, Guo H, Wang X, Liu Q, Kim T, Franklin JL, Graves-Deal R, Han W, Tian Z, Ge M, Nie Y, Fan D, Coffey RJ, Lu Y, Zhao X Theranostics 32641995 Theranostics 2020
Circular RNAs are down-regulated in KRAS mutant colon cancer cells and can be transferred to exosomes. Dou Y, Cha DJ, Franklin JL, Higginbotham JN, Jeppesen DK, Weaver AM, Prasad N, Levy S, Coffey RJ, Patton JG, Zhang B Scientific reports 27892494 Sci Rep 2016 Nov 28
Identification and characterization of EGF receptor in individual exosomes by fluorescence-activated vesicle sorting. Higginbotham JN, Zhang Q, Jeppesen DK, Scott AM, Manning HC, Ochieng J, Franklin JL, Coffey RJ Journal of extracellular vesicles 27345057 J Extracell Vesicles 2016
Bioinformatic analysis of endogenous and exogenous small RNAs on lipoproteins. Allen RM, Zhao S, Ramirez Solano MA, Zhu W, Michell DL, Wang Y, Shyr Y, Sethupathy P, Linton MF, Graf GA, Sheng Q, Vickers KC Journal of extracellular vesicles 30128086 J Extracell Vesicles 2018
Mutant KRAS Exosomes Alter the Metabolic State of Recipient Colonic Epithelial Cells. Zhang Q, Jeppesen DK, Higginbotham JN, Demory Beckler M, Poulin EJ, Walsh AJ, Skala MC, McKinley ET, Manning HC, Hight MR, Schulte ML, Watt KR, Ayers GD, Wolf MM, Andrejeva G, Rathmell JC, Franklin JL, Coffey RJ Cellular and molecular gastroenterology and hepatology 29930982 Cell Mol Gastroenterol Hepatol 2018
Directed migration: Cells navigate by extracellular vesicles. Sung BH, Weaver AM The Journal of cell biology 29976599 J Cell Biol 2018 Aug 6
miR-302a Inhibits Metastasis and Cetuximab Resistance in Colorectal Cancer by Targeting NFIB and CD44. Sun L, Fang Y, Wang X, Han Y, Du F, Li C, Hu H, Liu H, Liu Q, Wang J, Liang J, Chen P, Yang H, Nie Y, Wu K, Fan D, Coffey RJ, Lu Y, Zhao X, Wang X Theranostics 31754405 Theranostics 2019
Interaction of lncRNA MIR100HG with hnRNPA2B1 facilitates m(6)A-dependent stabilization of TCF7L2 mRNA and colorectal cancer progression. Liu H, Li D, Sun L, Qin H, Fan A, Meng L, Graves-Deal R, Glass SE, Franklin JL, Liu Q, Wang J, Yeatman TJ, Guo H, Zong H, Jin S, Chen Z, Deng T, Fang Y, Li C, Karijolich J, Patton JG, Wang X, Nie Y, Fan D, Coffey RJ, Zhao X, Lu Y Molecular cancer 35279145 Mol Cancer 2022 Mar 12
ER membrane contact sites: key platforms for biogenesis of RNA-containing extracellular vesicles. Barman B, Dawson TR, Weaver AM Contact (Thousand Oaks (Ventura County, Calif.)) 37008559 Contact (Thousand Oaks) 2022 Jan-Dec
Directional cell movement through tissues is controlled by exosome secretion. Sung BH, Ketova T, Hoshino D, Zijlstra A, Weaver AM Nature communications 25968605 Nat Commun 2015 May 13
KRAS-MEK Signaling Controls Ago2 Sorting into Exosomes. McKenzie AJ, Hoshino D, Hong NH, Cha DJ, Franklin JL, Coffey RJ, Patton JG, Weaver AM Cell reports 27117408 Cell Rep 2016 May 3
lncRNA MIR100HG-derived miR-100 and miR-125b mediate cetuximab resistance via Wnt/β-catenin signaling. Lu Y, Zhao X, Liu Q, Li C, Graves-Deal R, Cao Z, Singh B, Franklin JL, Wang J, Hu H, Wei T, Yang M, Yeatman TJ, Lee E, Saito-Diaz K, Hinger S, Patton JG, Chung CH, Emmrich S, Klusmann JH, Fan D, Coffey RJ Nature medicine 29035371 Nat Med 2017 Nov
Dysregulated ligand-receptor interactions from single-cell transcriptomics. Liu Q, Hsu CY, Li J, Shyr Y Bioinformatics (Oxford, England) 35482476 Bioinformatics 2022 Jun 13
Quantitative Proteomic Analysis of Small and Large Extracellular Vesicles (EVs) Reveals Enrichment of Adhesion Proteins in Small EVs. Jimenez L, Yu H, McKenzie AJ, Franklin JL, Patton JG, Liu Q, Weaver AM Journal of proteome research 30608700 J Proteome Res 2019 Mar 1
Minimal information for studies of extracellular vesicles 2018 (MISEV2018): a position statement of the International Society for Extracellular Vesicles and update of the MISEV2014 guidelines. Théry C, Witwer KW, Aikawa E, Alcaraz MJ, Anderson JD, Andriantsitohaina R, Antoniou A, Arab T, Archer F, Atkin-Smith GK, Ayre DC, Bach JM, Bachurski D, Baharvand H, Balaj L, Baldacchino S, Bauer NN, Baxter AA, Bebawy M, Beckham C, Bedina Zavec A, Benmoussa A, Berardi AC, Bergese P, Bielska E, Blenkiron C, Bobis-Wozowicz S, Boilard E, Boireau W, Bongiovanni A, Borràs FE, Bosch S, Boulanger CM, Breakefield X, Breglio AM, Brennan MÁ, Brigstock DR, Brisson A, Broekman ML, Bromberg JF, Bryl-Górecka P, Buch S, Buck AH, Burger D, Busatto S, Buschmann D, Bussolati B, Buzás EI, Byrd JB, Camussi G, Carter DR, Caruso S, Chamley LW, Chang YT, Chen C, Chen S, Cheng L, Chin AR, Clayton A, Clerici SP, Cocks A, Cocucci E, Coffey RJ, Cordeiro-da-Silva A, Couch Y, Coumans FA, Coyle B, Crescitelli R, Criado MF, D'Souza-Schorey C, Das S, Datta Chaudhuri A, de Candia P, De Santana EF, De Wever O, Del Portillo HA, Demaret T, Deville S, Devitt A, Dhondt B, Di Vizio D, Dieterich LC, Dolo V, Dominguez Rubio AP, Dominici M, Dourado MR, Driedonks TA, Duarte FV, Duncan HM, Eichenberger RM, Ekström K, El Andaloussi S, Elie-Caille C, Erdbrügger U, Falcón-Pérez JM, Fatima F, Fish JE, Flores-Bellver M, Försönits A, Frelet-Barrand A, Fricke F, Fuhrmann G, Gabrielsson S, Gámez-Valero A, Gardiner C, Gärtner K, Gaudin R, Gho YS, Giebel B, Gilbert C, Gimona M, Giusti I, Goberdhan DC, Görgens A, Gorski SM, Greening DW, Gross JC, Gualerzi A, Gupta GN, Gustafson D, Handberg A, Haraszti RA, Harrison P, Hegyesi H, Hendrix A, Hill AF, Hochberg FH, Hoffmann KF, Holder B, Holthofer H, Hosseinkhani B, Hu G, Huang Y, Huber V, Hunt S, Ibrahim AG, Ikezu T, Inal JM, Isin M, Ivanova A, Jackson HK, Jacobsen S, Jay SM, Jayachandran M, Jenster G, Jiang L, Johnson SM, Jones JC, Jong A, Jovanovic-Talisman T, Jung S, Kalluri R, Kano SI, Kaur S, Kawamura Y, Keller ET, Khamari D, Khomyakova E, Khvorova A, Kierulf P, Kim KP, Kislinger T, Klingeborn M, Klinke DJ 2nd, Kornek M, Kosanović MM, Kovács ÁF, Krämer-Albers EM, Krasemann S, Krause M, Kurochkin IV, Kusuma GD, Kuypers S, Laitinen S, Langevin SM, Languino LR, Lannigan J, Lässer C, Laurent LC, Lavieu G, Lázaro-Ibáñez E, Le Lay S, Lee MS, Lee YXF, Lemos DS, Lenassi M, Leszczynska A, Li IT, Liao K, Libregts SF, Ligeti E, Lim R, Lim SK, Linē A, Linnemannstöns K, Llorente A, Lombard CA, Lorenowicz MJ, Lörincz ÁM, Lötvall J, Lovett J, Lowry MC, Loyer X, Lu Q, Lukomska B, Lunavat TR, Maas SL, Malhi H, Marcilla A, Mariani J, Mariscal J, Martens-Uzunova ES, Martin-Jaular L, Martinez MC, Martins VR, Mathieu M, Mathivanan S, Maugeri M, McGinnis LK, McVey MJ, Meckes DG Jr, Meehan KL, Mertens I, Minciacchi VR, Möller A, Møller Jørgensen M, Morales-Kastresana A, Morhayim J, Mullier F, Muraca M, Musante L, Mussack V, Muth DC, Myburgh KH, Najrana T, Nawaz M, Nazarenko I, Nejsum P, Neri C, Neri T, Nieuwland R, Nimrichter L, Nolan JP, Nolte-'t Hoen EN, Noren Hooten N, O'Driscoll L, O'Grady T, O'Loghlen A, Ochiya T, Olivier M, Ortiz A, Ortiz LA, Osteikoetxea X, Østergaard O, Ostrowski M, Park J, Pegtel DM, Peinado H, Perut F, Pfaffl MW, Phinney DG, Pieters BC, Pink RC, Pisetsky DS, Pogge von Strandmann E, Polakovicova I, Poon IK, Powell BH, Prada I, Pulliam L, Quesenberry P, Radeghieri A, Raffai RL, Raimondo S, Rak J, Ramirez MI, Raposo G, Rayyan MS, Regev-Rudzki N, Ricklefs FL, Robbins PD, Roberts DD, Rodrigues SC, Rohde E, Rome S, Rouschop KM, Rughetti A, Russell AE, Saá P, Sahoo S, Salas-Huenuleo E, Sánchez C, Saugstad JA, Saul MJ, Schiffelers RM, Schneider R, Schøyen TH, Scott A, Shahaj E, Sharma S, Shatnyeva O, Shekari F, Shelke GV, Shetty AK, Shiba K, Siljander PR, Silva AM, Skowronek A, Snyder OL 2nd, Soares RP, Sódar BW, Soekmadji C, Sotillo J, Stahl PD, Stoorvogel W, Stott SL, Strasser EF, Swift S, Tahara H, Tewari M, Timms K, Tiwari S, Tixeira R, Tkach M, Toh WS, Tomasini R, Torrecilhas AC, Tosar JP, Toxavidis V, Urbanelli L, Vader P, van Balkom BW, van der Grein SG, Van Deun J, van Herwijnen MJ, Van Keuren-Jensen K, van Niel G, van Royen ME, van Wijnen AJ, Vasconcelos MH, Vechetti IJ Jr, Veit TD, Vella LJ, Velot É, Verweij FJ, Vestad B, Viñas JL, Visnovitz T, Vukman KV, Wahlgren J, Watson DC, Wauben MH, Weaver A, Webber JP, Weber V, Wehman AM, Weiss DJ, Welsh JA, Wendt S, Wheelock AM, Wiener Z, Witte L, Wolfram J, Xagorari A, Xander P, Xu J, Yan X, Yáñez-Mó M, Yin H, Yuana Y, Zappulli V, Zarubova J, Žėkas V, Zhang JY, Zhao Z, Zheng L, Zheutlin AR, Zickler AM, Zimmermann P, Zivkovic AM, Zocco D, Zuba-Surma EK Journal of extracellular vesicles 30637094 J Extracell Vesicles 2018
Rab13 regulates sEV secretion in mutant KRAS colorectal cancer cells. Hinger SA, Abner JJ, Franklin JL, Jeppesen DK, Coffey RJ, Patton JG Scientific reports 32978434 Sci Rep 2020 Sep 25
KRAS-dependent sorting of miRNA to exosomes. Cha DJ, Franklin JL, Dou Y, Liu Q, Higginbotham JN, Demory Beckler M, Weaver AM, Vickers K, Prasad N, Levy S, Zhang B, Coffey RJ, Patton JG eLife 26132860 Elife 2015 Jul 1
Choosing the Right Tool for the Job: RNAi, TALEN, or CRISPR. Boettcher M, McManus MT Molecular cell 26000843 Mol Cell 2015 May 21
BCAA catabolism in brown fat controls energy homeostasis through SLC25A44. Yoneshiro T, Wang Q, Tajima K, Matsushita M, Maki H, Igarashi K, Dai Z, White PJ, McGarrah RW, Ilkayeva OR, Deleye Y, Oguri Y, Kuroda M, Ikeda K, Li H, Ueno A, Ohishi M, Ishikawa T, Kim K, Chen Y, Sponton CH, Pradhan RN, Majd H, Greiner VJ, Yoneshiro M, Brown Z, Chondronikola M, Takahashi H, Goto T, Kawada T, Sidossis L, Szoka FC, McManus MT, Saito M, Soga T, Kajimura S Nature 31435015 Nature 2019 Aug
miR-205 Regulates Basal Cell Identity and Stem Cell Regenerative Potential During Mammary Reconstitution. Lu Y, Cao J, Napoli M, Xia Z, Zhao N, Creighton CJ, Li W, Chen X, Flores ER, McManus MT, Rosen JM Stem cells (Dayton, Ohio) 30267595 Stem Cells 2018 Dec
Examining the evidence for extracellular RNA function in mammals. Gruner HN, McManus MT Nature reviews. Genetics 33824487 Nat Rev Genet 2021 Jul
SIDT2 Transports Extracellular dsRNA into the Cytoplasm for Innate Immune Recognition. Nguyen TA, Smith BRC, Tate MD, Belz GT, Barrios MH, Elgass KD, Weisman AS, Baker PJ, Preston SP, Whitehead L, Garnham A, Lundie RJ, Smyth GK, Pellegrini M, O'Keeffe M, Wicks IP, Masters SL, Hunter CP, Pang KC Immunity 28916264 Immunity 2017 Sep 19
miR-205 is a critical regulator of lacrimal gland development. Farmer DT, Finley JK, Chen FY, Tarifeño-Saldivia E, McNamara NA, Knox SM, McManus MT Developmental biology 28511845 Dev Biol 2017 Jul 1
Defining epithelial cell dynamics and lineage relationships in the developing lacrimal gland. Farmer DT, Nathan S, Finley JK, Shengyang Yu K, Emmerson E, Byrnes LE, Sneddon JB, McManus MT, Tward AD, Knox SM Development (Cambridge, England) 28576768 Development 2017 Jul 1
Efficient Homologous Recombination in Mice Using Long Single Stranded DNA and CRISPR Cas9 Nickase. Ge XA, Hunter CP G3 (Bethesda, Md.) 30504134 G3 (Bethesda) 2019 Jan 9
MicroRNA regulation of allergic inflammation and asthma. Pua HH, Ansel KM Current opinion in immunology 26253882 Curr Opin Immunol 2015 Oct
Apolipoprotein E enhances microRNA-146a in monocytes and macrophages to suppress nuclear factor-κB-driven inflammation and atherosclerosis. Li K, Ching D, Luk FS, Raffai RL Circulation research 25904598 Circ Res 2015 Jun 19
MicroRNA regulation of lymphocyte tolerance and autoimmunity. Simpson LJ, Ansel KM The Journal of clinical investigation 26030228 J Clin Invest 2015 Jun
MYC-driven inhibition of the glutamate-cysteine ligase promotes glutathione depletion in liver cancer. Anderton B, Camarda R, Balakrishnan S, Balakrishnan A, Kohnz RA, Lim L, Evason KJ, Momcilovic O, Kruttwig K, Huang Q, Xu G, Nomura DK, Goga A EMBO reports 28219903 EMBO Rep 2017 Apr
In vivo Reprogramming of Cancer Metabolism by MYC. Camarda R, Williams J, Goga A Frontiers in cell and developmental biology 28443280 Front Cell Dev Biol 2017
microRNA 193a-5p Regulates Levels of Nucleolar- and Spindle-Associated Protein 1 to Suppress Hepatocarcinogenesis. Roy S, Hooiveld GJ, Seehawer M, Caruso S, Heinzmann F, Schneider AT, Frank AK, Cardenas DV, Sonntag R, Luedde M, Trautwein C, Stein I, Pikarsky E, Loosen S, Tacke F, Ringelhan M, Avsaroglu SK, Goga A, Buendia MA, Vucur M, Heikenwalder M, Zucman-Rossi J, Zender L, Roderburg C, Luedde T Gastroenterology 30165047 Gastroenterology 2018 Dec
Increased Hematopoietic Extracellular RNAs and Vesicles in the Lung during Allergic Airway Responses. Pua HH, Happ HC, Gray CJ, Mar DJ, Chiou NT, Hesse LE, Ansel KM Cell reports 30673615 Cell Rep 2019 Jan 22
Cushioned-Density Gradient Ultracentrifugation (C-DGUC): A Refined and High Performance Method for the Isolation, Characterization, and Use of Exosomes. Li K, Wong DK, Hong KY, Raffai RL Methods in molecular biology (Clifton, N.J.) 29388137 Methods Mol Biol 2018
Efficient labeling and imaging of protein-coding genes in living cells using CRISPR-Tag. Chen B, Zou W, Xu H, Liang Y, Huang B Nature communications 30498221 Nat Commun 2018 Nov 29
MicroRNA regulation of type 2 innate lymphoid cell homeostasis and function in allergic inflammation. Singh PB, Pua HH, Happ HC, Schneider C, von Moltke J, Locksley RM, Baumjohann D, Ansel KM The Journal of experimental medicine 29122948 J Exp Med 2017 Dec 4
Eri1: a conserved enzyme at the crossroads of multiple RNA-processing pathways. Thomas MF, L'Etoile ND, Ansel KM Trends in genetics : TIG 24929628 Trends Genet 2014 Jul
Kinase-mediated RAS signaling via membraneless cytoplasmic protein granules. Tulpule A, Guan J, Neel DS, Allegakoen HR, Lin YP, Brown D, Chou YT, Heslin A, Chatterjee N, Perati S, Menon S, Nguyen TA, Debnath J, Ramirez AD, Shi X, Yang B, Feng S, Makhija S, Huang B, Bivona TG Cell 33848463 Cell 2021 May 13
Oncogene-regulated release of extracellular vesicles. Kilinc S, Paisner R, Camarda R, Gupta S, Momcilovic O, Kohnz RA, Avsaroglu B, L'Etoile ND, Perera RM, Nomura DK, Goga A Developmental cell 34118203 Dev Cell 2021 Jul 12
Heavy water: a simple solution to increasing the brightness of fluorescent proteins in super-resolution imaging. Ong WQ, Citron YR, Schnitzbauer J, Kamiyama D, Huang B Chemical communications (Cambridge, England) 26226621 Chem Commun (Camb) 2015 Sep 11
Cushioned-Density Gradient Ultracentrifugation (C-DGUC) improves the isolation efficiency of extracellular vesicles. Duong P, Chung A, Bouchareychas L, Raffai RL PloS one 30973950 PLoS One 2019
2-Hydroxyglutarate-Mediated Autophagy of the Endoplasmic Reticulum Leads to an Unusual Downregulation of Phospholipid Biosynthesis in Mutant IDH1 Gliomas. Viswanath P, Radoul M, Izquierdo-Garcia JL, Ong WQ, Luchman HA, Cairncross JG, Huang B, Pieper RO, Phillips JJ, Ronen SM Cancer research 29358170 Cancer Res 2018 May 1
Pan-viral-microRNA screening identifies interferon inhibition as a common function of diverse viruses. Cox JE, McClure LV, Goga A, Sullivan CS Proceedings of the National Academy of Sciences of the United States of America 25624489 Proc Natl Acad Sci U S A 2015 Feb 10
Isolation of Plasma Lipoproteins as a Source of Extracellular RNA. Li K, Wong DK, Luk FS, Kim RY, Raffai RL Methods in molecular biology (Clifton, N.J.) 29388141 Methods Mol Biol 2018
A Distinct Inhibitory Function for miR-18a in Th17 Cell Differentiation. Montoya MM, Maul J, Singh PB, Pua HH, Dahlström F, Wu N, Huang X, Ansel KM, Baumjohann D Journal of immunology (Baltimore, Md. : 1950) 28607111 J Immunol 2017 Jul 15
A B-cell-homing chemokine made in lymphoid follicles activates Burkitt's lymphoma receptor-1. Gunn MD, Ngo VN, Ansel KM, Ekland EH, Cyster JG, Williams LT Nature 9486651 Nature 1998 Feb 19
Expanding the CRISPR imaging toolset with Staphylococcus aureus Cas9 for simultaneous imaging of multiple genomic loci. Chen B, Hu J, Almeida R, Liu H, Balakrishnan S, Covill-Cooke C, Lim WA, Huang B Nucleic acids research 26740581 Nucleic Acids Res 2016 May 5
Small RNA Transfection in Primary Human Th17 Cells by Next Generation Electroporation. Montoya MM, Ansel KM Journal of visualized experiments : JoVE 28448060 J Vis Exp 2017 Apr 13
Selective Export into Extracellular Vesicles and Function of tRNA Fragments during T Cell Activation. Chiou NT, Kageyama R, Ansel KM Cell reports 30566862 Cell Rep 2018 Dec 18
MicroRNA-146a & hematopoiesis: friend or foe in atherosclerosis. Raffai RL Non-coding RNA investigation 30101215 Noncoding RNA Investig 2018 Jul
Suppression of Exosomal PD-L1 Induces Systemic Anti-tumor Immunity and Memory. Poggio M, Hu T, Pai CC, Chu B, Belair CD, Chang A, Montabana E, Lang UE, Fu Q, Fong L, Blelloch R Cell 30951669 Cell 2019 Apr 4
Live Cell Imaging of Endogenous mRNA Using RNA-Based Fluorescence "Turn-On" Probe. Ong WQ, Citron YR, Sekine S, Huang B ACS chemical biology 28103687 ACS Chem Biol 2017 Jan 20
Collaborating to Compete: Blood Profiling Atlas in Cancer (BloodPAC) Consortium. Grossman RL, Abel B, Angiuoli S, Barrett JC, Bassett D, Bramlett K, Blumenthal GM, Carlsson A, Cortese R, DiGiovanna J, Davis-Dusenbery B, Dittamore R, Eberhard DA, Febbo P, Fitzsimons M, Flamig Z, Godsey J, Goswami J, Gruen A, Ortuño F, Han J, Hayes D, Hicks J, Holloway D, Hovelson D, Johnson J, Juhl H, Kalamegham R, Kamal R, Kang Q, Kelloff GJ, Klozenbuecher M, Kolatkar A, Kuhn P, Langone K, Leary R, Loverso P, Manmathan H, Martin AM, Martini J, Miller D, Mitchell M, Morgan T, Mulpuri R, Nguyen T, Otto G, Pathak A, Peters E, Philip R, Posadas E, Reese D, Reese MG, Robinson D, Dei Rossi A, Sakul H, Schageman J, Singh S, Scher HI, Schmitt K, Silvestro A, Simmons J, Simmons T, Sislow J, Talasaz A, Tang P, Tewari M, Tomlins S, Toukhy H, Tseng HR, Tuck M, Tzou A, Vinson J, Wang Y, Wells W, Welsh A, Wilbanks J, Wolf J, Young L, Lee J, Leiman LC Clinical pharmacology and therapeutics 28187516 Clin Pharmacol Ther 2017 May
A functional extracellular transcriptome in animals? Implications for biology, disease and medicine. Tewari M Genome biology 25723626 Genome Biol 2015 Feb 26
Phospho-RNAseq Profiling of Extracellular mRNAs and lncRNAs. Giraldez MD, Tewari M Methods in molecular biology (Clifton, N.J.) 34160813 Methods Mol Biol 2021
Men who inject opioids exhibit altered tRNA-Gly-GCC isoforms in semen. Gornalusse G, Spengler RM, Sandford E, Kim Y, Levy C, Tewari M, Hladik F, Vojtech L Molecular human reproduction 36661332 Mol Hum Reprod 2023 Feb 28
Phospho-RNA-seq: a modified small RNA-seq method that reveals circulating mRNA and lncRNA fragments as potential biomarkers in human plasma. Giraldez MD, Spengler RM, Etheridge A, Goicochea AJ, Tuck M, Choi SW, Galas DJ, Tewari M The EMBO journal 31053596 EMBO J 2019 Jun 3
Correction to: Exercise-induced circulating extracellular vesicles protect against cardiac ischemia-reperfusion injury. Bei Y, Xu T, Lv D, Yu P, Xu J, Che L, Das A, Tigges J, Toxavidis V, Ghiran I, Shah R, Li Y, Zhang Y, Das S, Xiao J Basic research in cardiology 31595368 Basic Res Cardiol 2019 Oct 8
Myosin IIA interacts with the spectrin-actin membrane skeleton to control red blood cell membrane curvature and deformability. Smith AS, Nowak RB, Zhou S, Giannetto M, Gokhin DS, Papoin J, Ghiran IC, Blanc L, Wan J, Fowler VM Proceedings of the National Academy of Sciences of the United States of America 29610350 Proc Natl Acad Sci U S A 2018 May 8
High-fidelity detection and sorting of nanoscale vesicles in viral disease and cancer. Morales-Kastresana A, Musich TA, Welsh JA, Telford W, Demberg T, Wood JCS, Bigos M, Ross CD, Kachynski A, Dean A, Felton EJ, Van Dyke J, Tigges J, Toxavidis V, Parks DR, Overton WR, Kesarwala AH, Freeman GJ, Rosner A, Perfetto SP, Pasquet L, Terabe M, McKinnon K, Kapoor V, Trepel JB, Puri A, Kobayashi H, Yung B, Chen X, Guion P, Choyke P, Knox SJ, Ghiran I, Robert-Guroff M, Berzofsky JA, Jones JC Journal of extracellular vesicles 31258878 J Extracell Vesicles 2019
A Novel Implementation of Magnetic Levitation to Quantify Leukocyte Size, Morphology, and Magnetic Properties to Identify Patients With Sepsis. Andersen MS, Lu S, Lopez GJ, Lassen AT, Shapiro NI, Ghiran IC Shock (Augusta, Ga.) 29561389 Shock 2019 Feb
Mast cells regulate CD4(+) T-cell differentiation in the absence of antigen presentation. Rodriguez Cetina Biefer H, Heinbokel T, Uehara H, Camacho V, Minami K, Nian Y, Koduru S, El Fatimy R, Ghiran I, Trachtenberg AJ, de la Fuente MA, Azuma H, Akbari O, Tullius SG, Vasudevan A, Elkhal A The Journal of allergy and clinical immunology 29470999 J Allergy Clin Immunol 2018 Dec
A Systematic Study of Dysregulated MicroRNA in Type 2 Diabetes Mellitus. He Y, Ding Y, Liang B, Lin J, Kim TK, Yu H, Hang H, Wang K International journal of molecular sciences 28264477 Int J Mol Sci 2017 Feb 28
Circulating RNAs as predictive markers for the progression of type 2 diabetes. Ghai V, Baxter D, Wu X, Kim TK, Kuusisto J, Laakso M, Connolly T, Li Y, Andrade-Gordon P, Wang K Journal of cellular and molecular medicine 30734465 J Cell Mol Med 2019 Apr
A biological function based biomarker panel optimization process. Lee MY, Kim TK, Walters KA, Wang K Scientific reports 31089177 Sci Rep 2019 May 14
The microRNA spectrum in 12 body fluids. Weber JA, Baxter DH, Zhang S, Huang DY, Huang KH, Lee MJ, Galas DJ, Wang K Clinical chemistry 20847327 Clin Chem 2010 Nov
Recent progress toward the use of circulating microRNAs as clinical biomarkers. Ghai V, Wang K Archives of toxicology 27585665 Arch Toxicol 2016 Dec
Extracellular vesicle RNAs reflect placenta dysfunction and are a biomarker source for preterm labour. Fallen S, Baxter D, Wu X, Kim TK, Shynlova O, Lee MY, Scherler K, Lye S, Hood L, Wang K Journal of cellular and molecular medicine 29516617 J Cell Mol Med 2018 May
Optimized permutation testing for information theoretic measures of multi-gene interactions. Kunert-Graf JM, Sakhanenko NA, Galas DJ BMC bioinformatics 33827420 BMC Bioinformatics 2021 Apr 7
Partial Information Decomposition and the Information Delta: A Geometric Unification Disentangling Non-Pairwise Information. Kunert-Graf J, Sakhanenko N, Galas D Entropy (Basel, Switzerland) 33266517 Entropy (Basel) 2020 Nov 24
sRNAnalyzer-a flexible and customizable small RNA sequencing data analysis pipeline. Wu X, Kim TK, Baxter D, Scherler K, Gordon A, Fong O, Etheridge A, Galas DJ, Wang K Nucleic acids research 29069500 Nucleic Acids Res 2017 Dec 1
The Importance of Standardization on Analyzing Circulating RNA. Lee I, Baxter D, Lee MY, Scherler K, Wang K Molecular diagnosis & therapy 28039578 Mol Diagn Ther 2017 Jun
Small RNA profiling of low biomass samples: identification and removal of contaminants. Heintz-Buschart A, Yusuf D, Kaysen A, Etheridge A, Fritz JV, May P, de Beaufort C, Upadhyaya BB, Ghosal A, Galas DJ, Wilmes P BMC biology 29759067 BMC Biol 2018 May 14
Extracellular Vesicle Encapsulated MicroRNAs in Patients with Type 2 Diabetes Are Affected by Metformin Treatment. Ghai V, Kim TK, Etheridge A, Nielsen T, Hansen T, Pedersen O, Galas D, Wang K Journal of clinical medicine 31067715 J Clin Med 2019 May 7
Circulating MicroRNAs and Extracellular Vesicle-Containing MicroRNAs as Response Biomarkers of Anti-programmed Cell Death Protein 1 or Programmed Death-Ligand 1 Therapy in NSCLC. Shukuya T, Ghai V, Amann JM, Okimoto T, Shilo K, Kim TK, Wang K, Carbone DP Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer 32565389 J Thorac Oncol 2020 Nov
Preparation of Small RNA NGS Libraries from Biofluids. Etheridge A, Wang K, Baxter D, Galas D Methods in molecular biology (Clifton, N.J.) 29388143 Methods Mol Biol 2018
Circulating MicroRNAs and Life Expectancy Among Identical Twins. Wu S, Kim TK, Wu X, Scherler K, Baxter D, Wang K, Krasnow RE, Reed T, Dai J Annals of human genetics 27402348 Ann Hum Genet 2016 Sep
mRNA transcript distribution bias between Borrelia burgdorferi bacteria and their outer membrane vesicles. Malge A, Ghai V, Reddy PJ, Baxter D, Kim TK, Moritz RL, Wang K FEMS microbiology letters 29846577 FEMS Microbiol Lett 2018 Jul 1
Alterations in Plasma microRNA and Protein Levels in War Veterans with Chronic Mild Traumatic Brain Injury. Ghai V, Fallen S, Baxter D, Scherler K, Kim TK, Zhou Y, Meabon JS, Logsdon AF, Banks WA, Schindler AG, Cook DG, Peskind ER, Lee I, Wang K Journal of neurotrauma 32024417 J Neurotrauma 2020 Jun 15
Thrombosis and platelets: an update. Koupenova M, Kehrel BE, Corkrey HA, Freedman JE European heart journal 28039338 Eur Heart J 2017 Mar 14
The Dynamic Platelet Transcriptome in Obesity and Weight Loss. Ezzaty Mirhashemi M, Shah RV, Kitchen RR, Rong J, Spahillari A, Pico AR, Vitseva O, Levy D, Demarco D, Shah S, Iafrati MD, Larson MG, Tanriverdi K, Freedman JE Arteriosclerosis, thrombosis, and vascular biology 33297754 Arterioscler Thromb Vasc Biol 2021 Feb
RNA delivery by extracellular vesicles in mammalian cells and its applications. O'Brien K, Breyne K, Ughetto S, Laurent LC, Breakefield XO Nature reviews. Molecular cell biology 32457507 Nat Rev Mol Cell Biol 2020 Oct
Extracellular microRNA and cognitive function in a prospective cohort of older men: The Veterans Affairs Normative Aging Study. Comfort N, Wu H, De Hoff P, Vuppala A, Vokonas PS, Spiro A, Weisskopf M, Coull BA, Laurent LC, Baccarelli AA, Schwartz J Aging 36069796 Aging (Albany NY) 2022 Sep 6
Statistically based splicing detection reveals neural enrichment and tissue-specific induction of circular RNA during human fetal development. Szabo L, Morey R, Palpant NJ, Wang PL, Afari N, Jiang C, Parast MM, Murry CE, Laurent LC, Salzman J Genome biology 26076956 Genome Biol 2015 Jun 16
Air Pollution and Lung Function in Minority Youth with Asthma in the GALA II (Genes-Environments and Admixture in Latino Americans) and SAGE II (Study of African Americans, Asthma, Genes, and Environments) Studies. Neophytou AM, White MJ, Oh SS, Thakur N, Galanter JM, Nishimura KK, Pino-Yanes M, Torgerson DG, Gignoux CR, Eng C, Nguyen EA, Hu D, Mak AC, Kumar R, Seibold MA, Davis A, Farber HJ, Meade K, Avila PC, Serebrisky D, Lenoir MA, Brigino-Buenaventura E, Rodriguez-Cintron W, Bibbins-Domingo K, Thyne SM, Williams LK, Sen S, Gilliland FD, Gauderman WJ, Rodriguez-Santana JR, Lurmann F, Balmes JR, Eisen EA, Burchard EG American journal of respiratory and critical care medicine 26734713 Am J Respir Crit Care Med 2016 Jun 1
MicroRNAs 24 and 27 Suppress Allergic Inflammation and Target a Network of Regulators of T Helper 2 Cell-Associated Cytokine Production. Pua HH, Steiner DF, Patel S, Gonzalez JR, Ortiz-Carpena JF, Kageyama R, Chiou NT, Gallman A, de Kouchkovsky D, Jeker LT, McManus MT, Erle DJ, Ansel KM Immunity 26850657 Immunity 2016 Apr 19
IFN-stimulated Gene Expression, Type 2 Inflammation, and Endoplasmic Reticulum Stress in Asthma. Bhakta NR, Christenson SA, Nerella S, Solberg OD, Nguyen CP, Choy DF, Jung KL, Garudadri S, Bonser LR, Pollack JL, Zlock LT, Erle DJ, Langelier C, Derisi JL, Arron JR, Fahy JV, Woodruff PG American journal of respiratory and critical care medicine 29064281 Am J Respir Crit Care Med 2018 Feb 1
Exosomes Derived from HIV-1 Infected DCs Mediate Viral trans-Infection via Fibronectin and Galectin-3. Kulkarni R, Prasad A Scientific reports 29093555 Sci Rep 2017 Nov 1
Lymphocyte-specific protein 1 (LSP1) regulates bone marrow stromal cell antigen 2 (BST-2)-mediated intracellular trafficking of HIV-1 in dendritic cells. Kulkarni R, Jiang S, Birrane G, Prasad A FEBS letters 32279313 FEBS Lett 2020 Jun
Soybean-derived Bowman-Birk Inhibitor (BBI) Inhibits HIV Replication in Macrophages. Ma TC, Zhou RH, Wang X, Li JL, Sang M, Zhou L, Zhuang K, Hou W, Guo DY, Ho WZ Scientific reports 27734899 Sci Rep 2016 Oct 13
Neuroprotective Activity of (-)-Epigallocatechin Gallate against Lipopolysaccharide-Mediated Cytotoxicity. Liu JB, Zhou L, Wang YZ, Wang X, Zhou Y, Ho WZ, Li JL Journal of immunology research 27191001 J Immunol Res 2016
GalNAc-Specific Soybean Lectin Inhibits HIV Infection of Macrophages through Induction of Antiviral Factors. Zhou R, Wang X, Liu H, Guo L, Su Q, Wang H, Vasiliadis T, Ho W, Li J Journal of virology 29263266 J Virol 2018 Mar 15
IFN-λ4 inhibits HIV infection of macrophages through signalling of IFN-λR1/IL-10R2 receptor complex. Su QJ, Wang X, Zhou RH, Guo L, Liu H, Li JL, Ho WZ Scandinavian journal of immunology 30247785 Scand J Immunol 2018 Nov
Soybean-derived Bowman-Birk inhibitor (BBI) blocks HIV entry into macrophages. Ma TC, Le Guo, Zhou RH, Wang X, Liu JB, Li JL, Zhou Y, Hou W, Ho WZ Virology 29040829 Virology 2018 Jan 1
Epigallocatechin Gallate Inhibits Macaque SEVI-Mediated Enhancement of SIV or SHIV Infection. Zhou RH, Guo L, Liu JB, Liu H, Hou W, Ma TC, Wang X, Wu JG, Ye L, Ho WZ, Li JL Journal of acquired immune deficiency syndromes (1999) 28328549 J Acquir Immune Defic Syndr 2017 Jun 1
Epigallocatechin-3-gallate local pre-exposure application prevents SHIV rectal infection of macaques. Liu JB, Li JL, Zhuang K, Liu H, Wang X, Xiao QH, Li XD, Zhou RH, Zhou L, Ma TC, Zhou W, Liu MQ, Ho WZ Mucosal immunology 29855550 Mucosal Immunol 2018 Jul
Short Communication: HIV-1 Infection Suppresses Circulating Viral Restriction microRNAs. Zhou Y, Sun L, Wang X, Liang H, Ye L, Zhou L, Liang BY, Li JL, Liu MQ, Peng JS, Zhou DJ, Gui XE, Ho WZ AIDS research and human retroviruses 26607272 AIDS Res Hum Retroviruses 2016 Apr
Heroin inhibits HIV-restriction miRNAs and enhances HIV infection of macrophages. Wang X, Ma TC, Li JL, Zhou Y, Geller EB, Adler MW, Peng JS, Zhou W, Zhou DJ, Ho WZ Frontiers in microbiology 26583016 Front Microbiol 2015
Comparative Analysis of Immune Activation Markers of CD8(+) T Cells in Lymph Nodes of Different Origins in SIV-Infected Chinese Rhesus Macaques. Liu J, Xiao Q, Zhou R, Wang Y, Xian Q, Ma T, Zhuang K, Zhou L, Guo D, Wang X, Ho WZ, Li J Frontiers in immunology 27708644 Front Immunol 2016
Toll-like receptor 3-activated macrophages confer anti-HCV activity to hepatocytes through exosomes. Zhou Y, Wang X, Sun L, Zhou L, Ma TC, Song L, Wu JG, Li JL, Ho WZ FASEB journal : official publication of the Federation of American Societies for Experimental Biology 27605546 FASEB J 2016 Dec
Exosomes contribute to the transmission of anti-HIV activity from TLR3-activated brain microvascular endothelial cells to macrophages. Sun L, Wang X, Zhou Y, Zhou RH, Ho WZ, Li JL Antiviral research 27496004 Antiviral Res 2016 Oct
Human Intestinal Epithelial Cells Release Antiviral Factors That Inhibit HIV Infection of Macrophages. Guo L, Xu XQ, Zhou L, Zhou RH, Wang X, Li JL, Liu JB, Liu H, Zhang B, Ho WZ Frontiers in immunology 29515574 Front Immunol 2018
HIV-1 Tat-Induced Astrocytic Extracellular Vesicle miR-7 Impairs Synaptic Architecture. Hu G, Niu F, Liao K, Periyasamy P, Sil S, Liu J, Dravid SM, Buch S Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology 31401755 J Neuroimmune Pharmacol 2020 Sep
Opioid-Mediated HIV-1 Immunopathogenesis. Buch S, Periyasamy P, Thangaraj A, Sil S, Chivero ET, Tripathi A Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology 33029670 J Neuroimmune Pharmacol 2020 Dec
Sequence-specific extracellular microRNAs activate TLR7 and induce cytokine secretion and leukocyte migration. Wu N, Morsey BM, Emanuel KM, Fox HS Molecular and cellular biochemistry 34313894 Mol Cell Biochem 2021 Nov
Morphine-mediated release of miR-138 in astrocyte-derived extracellular vesicles promotes microglial activation. Liao K, Niu F, Hu G, Yang L, Dallon B, Villarreal D, Buch S Journal of extracellular vesicles 33304479 J Extracell Vesicles 2020 Oct
Alzheimer's-Like Pathology at the Crossroads of HIV-Associated Neurological Disorders. Chemparthy DT, Kannan M, Gordon L, Buch S, Sil S Vaccines 34452054 Vaccines (Basel) 2021 Aug 21
Transactivation of TrkB by Sigma-1 receptor mediates cocaine-induced changes in dendritic spine density and morphology in hippocampal and cortical neurons. Ka M, Kook YH, Liao K, Buch S, Kim WY Cell death & disease 27735948 Cell Death Dis 2016 Oct 13
Exosomal miR-9 Released from HIV Tat Stimulated Astrocytes Mediates Microglial Migration. Yang L, Niu F, Yao H, Liao K, Chen X, Kook Y, Ma R, Hu G, Buch S Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology 29497921 J Neuroimmune Pharmacol 2018 Sep
Neuronal-derived extracellular vesicles are enriched in the brain and serum of HIV-1 transgenic rats. Dagur RS, Liao K, Sil S, Niu F, Sun Z, Lyubchenko YL, Peeples ES, Hu G, Buch S Journal of extracellular vesicles 32002168 J Extracell Vesicles 2020
Extracellular Vesicles in Viral Infections of the Nervous System. Kutchy NA, Peeples ES, Sil S, Liao K, Chivero ET, Hu G, Buch S Viruses 32605316 Viruses 2020 Jun 28
Proceedings of the 2017 ISEV symposium on "HIV, NeuroHIV, drug abuse, & EVs". Hu G, Yelamanchili S, Kashanchi F, Haughey N, Bond VC, Witwer KW, Pulliam L, Buch S Journal of neurovirology 29147885 J Neurovirol 2017 Dec
Morphine Potentiates Dysbiotic Microbial and Metabolic Shifts in Acute SIV Infection. Sindberg GM, Callen SE, Banerjee S, Meng J, Hale VL, Hegde R, Cheney PD, Villinger F, Roy S, Buch S Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology 30242614 J Neuroimmune Pharmacol 2019 Jun
Non-Coding RNAs in HIV Infection, NeuroHIV, and Related Comorbidities. Singh S, Deshetty UM, Ray S, Oladapo A, Horanieh E, Buch S, Periyasamy P Cells 38891030 Cells 2024 May 23
Emerging roles of extracellular vesicles in neurodegenerative disorders: focus on HIV-associated neurological complications. Hu G, Yang L, Cai Y, Niu F, Mezzacappa F, Callen S, Fox HS, Buch S Cell death & disease 27882942 Cell Death Dis 2016 Nov 24
HIV-1 Tat Primes and Activates Microglial NLRP3 Inflammasome-Mediated Neuroinflammation. Chivero ET, Guo ML, Periyasamy P, Liao K, Callen SE, Buch S The Journal of neuroscience : the official journal of the Society for Neuroscience 28270571 J Neurosci 2017 Mar 29
Strategies for the use of Extracellular Vesicles for the Delivery of Therapeutics. Sil S, Dagur RS, Liao K, Peeples ES, Hu G, Periyasamy P, Buch S Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology 31456107 J Neuroimmune Pharmacol 2020 Sep
Cocaine Mediated Neuroinflammation: Role of Dysregulated Autophagy in Pericytes. Sil S, Niu F, Tom E, Liao K, Periyasamy P, Buch S Molecular neurobiology 30151726 Mol Neurobiol 2019 May
Cocaine-induced release of CXCL10 from pericytes regulates monocyte transmigration into the CNS. Niu F, Liao K, Hu G, Sil S, Callen S, Guo ML, Yang L, Buch S The Journal of cell biology 30626719 J Cell Biol 2019 Feb 4
Molecular mechanisms of long noncoding RNAs and their role in disease pathogenesis. Hu G, Niu F, Humburg BA, Liao K, Bendi S, Callen S, Fox HS, Buch S Oncotarget 29719633 Oncotarget 2018 Apr 6
HIV-1 Tat induced microglial EVs leads to neuronal synaptodendritic injury: microglia-neuron cross-talk in NeuroHIV. Kannan M, Singh S, Chemparathy DT, Oladapo AA, Gawande DY, Dravid SM, Buch S, Sil S Extracellular vesicles and circulating nucleic acids 36812097 Extracell Vesicles Circ Nucl Acids 2022
Advances in the Experimental Models of HIV-Associated Neurological Disorders. Sil S, Periyasamy P, Thangaraj A, Niu F, Chemparathy DT, Buch S Current HIV/AIDS reports 34427869 Curr HIV/AIDS Rep 2021 Oct
Astrocyte EV-Induced lincRNA-Cox2 Regulates Microglial Phagocytosis: Implications for Morphine-Mediated Neurodegeneration. Hu G, Liao K, Niu F, Yang L, Dallon BW, Callen S, Tian C, Shu J, Cui J, Sun Z, Lyubchenko YL, Ka M, Chen XM, Buch S Molecular therapy. Nucleic acids 30388619 Mol Ther Nucleic Acids 2018 Dec 7
Extracellular miRNAs as biomarkers in cancer. Barger JF, Rahman MA, Jackson D, Acunzo M, Nana-Sinkam SP Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association 27311798 Food Chem Toxicol 2016 Dec
Extracellular Vesicle Biology in the Pathogenesis of Lung Disease. Nana-Sinkam SP, Acunzo M, Croce CM, Wang K American journal of respiratory and critical care medicine 28678586 Am J Respir Crit Care Med 2017 Dec 15
Large-scale, cross-flow based isolation of highly pure and endocytosis-competent extracellular vesicles. McNamara RP, Caro-Vegas CP, Costantini LM, Landis JT, Griffith JD, Damania BA, Dittmer DP Journal of extracellular vesicles 30533204 J Extracell Vesicles 2018
Viral effects on the content and function of extracellular vesicles. Raab-Traub N, Dittmer DP Nature reviews. Microbiology 28649136 Nat Rev Microbiol 2017 Sep
Purification Methods and the Presence of RNA in Virus Particles and Extracellular Vesicles. Zhou Y, McNamara RP, Dittmer DP Viruses 32825599 Viruses 2020 Aug 21
Modern Techniques for the Isolation of Extracellular Vesicles and Viruses. McNamara RP, Dittmer DP Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology 31512168 J Neuroimmune Pharmacol 2020 Sep
Extracellular vesicles from Kaposi Sarcoma-associated herpesvirus lymphoma induce long-term endothelial cell reprogramming. McNamara RP, Chugh PE, Bailey A, Costantini LM, Ma Z, Bigi R, Cheves A, Eason AB, Landis JT, Host KM, Xiong J, Griffith JD, Damania B, Dittmer DP PLoS pathogens 30716130 PLoS Pathog 2019 Feb
Imaging of surface microdomains on individual extracellular vesicles in 3-D. McNamara RP, Zhou Y, Eason AB, Landis JT, Chambers MG, Willcox S, Peterson TA, Schouest B, Maness NJ, MacLean AG, Costantini LM, Griffith JD, Dittmer DP Journal of extracellular vesicles 35234354 J Extracell Vesicles 2022 Mar
Nef Secretion into Extracellular Vesicles or Exosomes Is Conserved across Human and Simian Immunodeficiency Viruses. McNamara RP, Costantini LM, Myers TA, Schouest B, Maness NJ, Griffith JD, Damania BA, MacLean AG, Dittmer DP mBio 29437924 mBio 2018 Feb 6
Extracellular vesicles in virus infection and pathogenesis. McNamara RP, Dittmer DP Current opinion in virology 32846272 Curr Opin Virol 2020 Oct
Low T-cell subsets prior to development of virus-associated cancer in HIV-seronegative men who have sex with men. Dutta A, Uno H, Lorenz DR, Wolinsky SM, Gabuzda D Cancer causes & control : CCC 30315476 Cancer Causes Control 2018 Nov
Transcriptomic analysis of monocytes from HIV-positive men on antiretroviral therapy reveals effects of tobacco smoking on interferon and stress response systems associated with depressive symptoms. Lorenz DR, Misra V, Gabuzda D Human genomics 31779701 Hum Genomics 2019 Nov 28
Multimorbidity networks associated with frailty among middle-aged and older people with HIV. Lorenz DR, Mukerji SS, Misra V, Uno H, Gelman BB, Moore DJ, Singer EJ, Morgello S, Gabuzda D AIDS (London, England) 34324449 AIDS 2021 Dec 1
Small RNA sequencing of extracellular vesicles identifies circulating miRNAs related to inflammation and oxidative stress in HIV patients. Chettimada S, Lorenz DR, Misra V, Wolinsky SM, Gabuzda D BMC immunology 33176710 BMC Immunol 2020 Nov 11
Exosome markers associated with immune activation and oxidative stress in HIV patients on antiretroviral therapy. Chettimada S, Lorenz DR, Misra V, Dillon ST, Reeves RK, Manickam C, Morgello S, Kirk GD, Mehta SH, Gabuzda D Scientific reports 29740045 Sci Rep 2018 May 8
Genomic Landscape of Primary and Recurrent Anal Squamous Cell Carcinomas in Relation to HPV Integration, Copy-Number Variation, and DNA Damage Response Genes. Aldersley J, Lorenz DR, Mouw KW, D'Andrea AD, Gabuzda D Molecular cancer research : MCR 33883185 Mol Cancer Res 2021 Aug
Impact of Antiretroviral Regimens on Cerebrospinal Fluid Viral Escape in a Prospective Multicohort Study of Antiretroviral Therapy-Experienced Human Immunodeficiency Virus-1-Infected Adults in the United States. Mukerji SS, Misra V, Lorenz DR, Uno H, Morgello S, Franklin D, Ellis RJ, Letendre S, Gabuzda D Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 29617912 Clin Infect Dis 2018 Sep 28
Acrolein and other toxicant exposures in relation to cardiovascular disease among marijuana and tobacco smokers in a longitudinal cohort of HIV-positive and negative adults. Lorenz DR, Misra V, Chettimada S, Uno H, Wang L, Blount BC, De Jesús VR, Gelman BB, Morgello S, Wolinsky SM, Gabuzda D EClinicalMedicine 33554087 EClinicalMedicine 2021 Jan
Cerebrospinal fluid extracellular vesicles and neurofilament light protein as biomarkers of central nervous system injury in HIV-infected patients on antiretroviral therapy. Guha D, Mukerji SS, Chettimada S, Misra V, Lorenz DR, Morgello S, Gabuzda D AIDS (London, England) 30557159 AIDS 2019 Mar 15
Proteomic analysis of cerebrospinal fluid extracellular vesicles reveals synaptic injury, inflammation, and stress response markers in HIV patients with cognitive impairment. Guha D, Lorenz DR, Misra V, Chettimada S, Morgello S, Gabuzda D Journal of neuroinflammation 31805958 J Neuroinflammation 2019 Dec 5
White Matter Abnormalities Linked to Interferon, Stress Response, and Energy Metabolism Gene Expression Changes in Older HIV-Positive Patients on Antiretroviral Therapy. Solomon IH, Chettimada S, Misra V, Lorenz DR, Gorelick RJ, Gelman BB, Morgello S, Gabuzda D Molecular neurobiology 31691183 Mol Neurobiol 2020 Feb
Predictors of Transition to Frailty in Middle-Aged and Older People With HIV: A Prospective Cohort Study. Lorenz DR, Mukerji SS, Misra V, Uno H, Gelman BB, Moore DJ, Singer EJ, Morgello S, Gabuzda D Journal of acquired immune deficiency syndromes (1999) 34757975 J Acquir Immune Defic Syndr 2021 Dec 15
Longitudinal Modeling of Depressive Trajectories Among HIV-Infected Men Using Cocaine. Mukerji S, Haghighat R, Misra V, Lorenz DR, Holman A, Dutta A, Gabuzda D AIDS and behavior 28550378 AIDS Behav 2017 Jul
Low Neuroactive Steroids Identifies a Biological Subtype of Depression in Adults with Human Immunodeficiency Virus on Suppressive Antiretroviral Therapy. Mukerji SS, Misra V, Lorenz DR, Chettimada S, Keller K, Letendre S, Ellis RJ, Morgello S, Parker RA, Gabuzda D The Journal of infectious diseases 32157292 J Infect Dis 2021 May 20
TNFα and IL-1β modify the miRNA cargo of astrocyte shed extracellular vesicles to regulate neurotrophic signaling in neurons. Chaudhuri AD, Dastgheyb RM, Yoo SW, Trout A, Talbot CC Jr, Hao H, Witwer KW, Haughey NJ Cell death & disease 29507357 Cell Death Dis 2018 Mar 5
A novel and potent brain penetrant inhibitor of extracellular vesicle release. Rojas C, Sala M, Thomas AG, Datta Chaudhuri A, Yoo SW, Li Z, Dash RP, Rais R, Haughey NJ, Nencka R, Slusher B British journal of pharmacology 31273753 Br J Pharmacol 2019 Oct
Stimulus-dependent modifications in astrocyte-derived extracellular vesicle cargo regulate neuronal excitability. Datta Chaudhuri A, Dasgheyb RM, DeVine LR, Bi H, Cole RN, Haughey NJ Glia 31469478 Glia 2020 Jan
Lipidomic characterization of extracellular vesicles in human serum. Chen S, Datta-Chaudhuri A, Deme P, Dickens A, Dastgheyb R, Bhargava P, Bi H, Haughey NJ Journal of circulating biomarkers 31632506 J Circ Biomark 2019 Jan-Dec
Interaction of paroxetine with mitochondrial proteins mediates neuroprotection. Steiner JP, Bachani M, Wolfson-Stofko B, Lee MH, Wang T, Li G, Li W, Strayer D, Haughey NJ, Nath A Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics 25404050 Neurotherapeutics 2015 Jan
Erratum to: Interaction of Paroxetine with Mitochondrial Proteins Mediates Neuroprotection. Steiner JP, Bachani M, Wolfson-Stofko B, Lee MH, Wang T, Li G, Li W, Strayer D, Haughey NJ, Nath A Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics 26692391 Neurotherapeutics 2016 Jan
DPTIP, a newly identified potent brain penetrant neutral sphingomyelinase 2 inhibitor, regulates astrocyte-peripheral immune communication following brain inflammation. Rojas C, Barnaeva E, Thomas AG, Hu X, Southall N, Marugan J, Chaudhuri AD, Yoo SW, Hin N, Stepanek O, Wu Y, Zimmermann SC, Gadiano AG, Tsukamoto T, Rais R, Haughey N, Ferrer M, Slusher BS Scientific reports 30531925 Sci Rep 2018 Dec 7
Modifications in acute phase and complement systems predict shifts in cognitive status of HIV-infected patients. Ubaida-Mohien C, Lamberty B, Dickens AM, Mielke MM, Marcotte T, Sacktor N, Grant I, Letendre S, Franklin D, Cibrowski P, Tharakan R, McArthur JC, Fox H, Haughey NJ AIDS (London, England) 28574961 AIDS 2017 Jun 19
Quantitative detection of free 24S-hydroxycholesterol, and 27-hydroxycholesterol from human serum. Bandaru VV, Haughey NJ BMC neuroscience 25539717 BMC Neurosci 2014 Dec 24
Involvement of organelles and inter-organellar signaling in the pathogenesis of HIV-1 associated neurocognitive disorder and Alzheimer's disease. Khan N, Haughey NJ, Nath A, Geiger JD Brain research 31425679 Brain Res 2019 Nov 1
Humoral Dysregulation Associated with Increased Systemic Inflammation among Injection Heroin Users. Piepenbrink MS, Samuel M, Zheng B, Carter B, Fucile C, Bunce C, Kiebala M, Khan AA, Thakar J, Maggirwar SB, Morse D, Rosenberg AF, Haughey NJ, Valenti W, Keefer MC, Kobie JJ PloS one 27379802 PLoS One 2016
HIV-associated neurocognitive disorder - pathogenesis and prospects for treatment. Saylor D, Dickens AM, Sacktor N, Haughey N, Slusher B, Pletnikov M, Mankowski JL, Brown A, Volsky DJ, McArthur JC Nature reviews. Neurology 27080521 Nat Rev Neurol 2016 May
Inhibition of neutral sphingomyelinase 2 promotes remyelination. Yoo SW, Agarwal A, Smith MD, Khuder SS, Baxi EG, Thomas AG, Rojas C, Moniruzzaman M, Slusher BS, Bergles DE, Calabresi PA, Haughey NJ Science advances 33008902 Sci Adv 2020 Oct
Bioenergetic adaptations to HIV infection. Could modulation of energy substrate utilization improve brain health in people living with HIV-1? Deme P, Rojas C, Slusher BS, Rais R, Afghah Z, Geiger JD, Haughey NJ Experimental neurology 31930991 Exp Neurol 2020 May
Ceramide Accumulation Is Associated with Declining Verbal Memory in Coronary Artery Disease Patients: An Observational Study. Chan P, Saleem M, Herrmann N, Mielke MM, Haughey NJ, Oh PI, Kiss A, Lanctôt KL Journal of Alzheimer's disease : JAD 30010121 J Alzheimers Dis 2018
A Lipidomics Approach to Assess the Association Between Plasma Sphingolipids and Verbal Memory Performance in Coronary Artery Disease Patients Undertaking Cardiac Rehabilitation: A C18:0 Signature for Cognitive Response to Exercise. Saleem M, Herrmann N, Dinoff A, Mielke MM, Oh PI, Shammi P, Cao X, Venkata SLV, Haughey NJ, Lanctôt KL Journal of Alzheimer's disease : JAD 28598843 J Alzheimers Dis 2017
HIV-associated neurocognitive disorder--pathogenesis and prospects for treatment. Saylor D, Dickens AM, Sacktor N, Haughey N, Slusher B, Pletnikov M, Mankowski JL, Brown A, Volsky DJ, McArthur JC Nature reviews. Neurology 26965674 Nat Rev Neurol 2016 Apr
A pro-inflammatory CD8+ T-cell subset patrols the cervicovaginal tract. Pattacini L, Woodward Davis A, Czartoski J, Mair F, Presnell S, Hughes SM, Hyrien O, Lentz GM, Kirby AC, Fialkow MF, Hladik F, Prlic M, Lund JM Mucosal immunology 31312028 Mucosal Immunol 2019 Sep
Temperature-Responsive Magnetic Nanoparticles for Enabling Affinity Separation of Extracellular Vesicles. Jauregui R, Srinivasan S, Vojtech LN, Gammill HS, Chiu DT, Hladik F, Stayton PS, Lai JJ ACS applied materials & interfaces 30152229 ACS Appl Mater Interfaces 2018 Oct 10
HIV reservoir quantification by five-target multiplex droplet digital PCR. Levy CN, Hughes SM, Roychoudhury P, Amstuz C, Zhu H, Huang ML, Lehman DA, Jerome KR, Hladik F STAR protocols 34693363 STAR Protoc 2021 Dec 17
Buprenorphine Increases HIV-1 Infection In Vitro but Does Not Reactivate HIV-1 from Latency. Gornalusse GG, Vojtech LN, Levy CN, Hughes SM, Kim Y, Valdez R, Pandey U, Ochsenbauer C, Astronomo R, McElrath J, Hladik F Viruses 34452338 Viruses 2021 Jul 27
HIV reservoir quantification using cross-subtype multiplex ddPCR. Cassidy NAJ, Fish CS, Levy CN, Roychoudhury P, Reeves DB, Hughes SM, Schiffer JT, Benki-Nugent S, John-Stewart G, Wamalwa D, Jerome KR, Overbaugh J, Hladik F, Lehman DA iScience 35106463 iScience 2022 Jan 21
Effect of Mucosal Cytokine Administration on Selective Expansion of Vaginal Dendritic Cells to Support Nanoparticle Transport. Ramanathan R, Park J, Hughes SM, Lykins WR, Bennett HR, Hladik F, Woodrow KA American journal of reproductive immunology (New York, N.Y. : 1989) 26118309 Am J Reprod Immunol 2015 Oct
Innate immune regulation in HIV latency models. Olson RM, Gornalusse G, Whitmore LS, Newhouse D, Tisoncik-Go J, Smith E, Ochsenbauer C, Hladik F, Gale M Jr Retrovirology 35804422 Retrovirology 2022 Jul 8
The human memory T cell compartment changes across tissues of the female reproductive tract. Woodward Davis AS, Vick SC, Pattacini L, Voillet V, Hughes SM, Lentz GM, Kirby AC, Fialkow MF, Gottardo R, Hladik F, Lund JM, Prlic M Mucosal immunology 33953338 Mucosal Immunol 2021 Jul
Potent Restriction of Sexual Zika Virus Infection by the Lipid Fraction of Extracellular Vesicles in Semen. Wang R, Gornalusse GG, Kim Y, Pandey U, Hladik F, Vojtech L Frontiers in microbiology 33133043 Front Microbiol 2020
Optimization and comparison of CD4-targeting lipid-polymer hybrid nanoparticles using different binding ligands. Cao S, Jiang Y, Levy CN, Hughes SM, Zhang H, Hladik F, Woodrow KA Journal of biomedical materials research. Part A 29271128 J Biomed Mater Res A 2018 May
Quantum Dot Labeling and Visualization of Extracellular Vesicles. Zhang M, Vojtech L, Ye Z, Hladik F, Nance E ACS applied nano materials 34568770 ACS Appl Nano Mater 2020 Jul 24
Protocol for high-throughput reservoir quantification across global HIV subtypes using a cross-subtype intact proviral DNA assay. Fish CS, Cassidy NAJ, Levy CN, Hughes SM, Jerome KR, Overbaugh J, Hladik F, Lehman DA STAR protocols 36178789 STAR Protoc 2022 Dec 16
Extracellular vesicles in human semen modulate antigen-presenting cell function and decrease downstream antiviral T cell responses. Vojtech L, Zhang M, Davé V, Levy C, Hughes SM, Wang R, Calienes F, Prlic M, Nance E, Hladik F PloS one 31622420 PLoS One 2019
Mechanisms of Endogenous HIV-1 Reactivation by Endocervical Epithelial Cells. Gornalusse GG, Valdez R, Fenkart G, Vojtech L, Fleming LM, Pandey U, Hughes SM, Levy CN, Dela Cruz EJ, Calienes FL, Kirby AC, Fialkow MF, Lentz GM, Wagoner J, Jing L, Koelle DM, Polyak SJ, Fredricks DN, McElrath MJ, Wald A, Hladik F Journal of virology 32051273 J Virol 2020 Apr 16
A highly multiplexed droplet digital PCR assay to measure the intact HIV-1 proviral reservoir. Levy CN, Hughes SM, Roychoudhury P, Reeves DB, Amstuz C, Zhu H, Huang ML, Wei Y, Bull ME, Cassidy NAJ, McClure J, Frenkel LM, Stone M, Bakkour S, Wonderlich ER, Busch MP, Deeks SG, Schiffer JT, Coombs RW, Lehman DA, Jerome KR, Hladik F Cell reports. Medicine 33948574 Cell Rep Med 2021 Apr 20
Hybrid nanocarriers incorporating mechanistically distinct drugs for lymphatic CD4(+) T cell activation and HIV-1 latency reversal. Cao S, Slack SD, Levy CN, Hughes SM, Jiang Y, Yogodzinski C, Roychoudhury P, Jerome KR, Schiffer JT, Hladik F, Woodrow KA Science advances 30944862 Sci Adv 2019 Mar
Proceedings of the ISEV symposium on "HIV, NeuroAIDS, drug abuse & EVs". Hu G, Witwer KW, Bond VC, Haughey N, Kashanchi F, Pulliam L, Buch S Journal of extracellular vesicles 28800366 J Extracell Vesicles 2017
Towards mechanisms and standardization in extracellular vesicle and extracellular RNA studies: results of a worldwide survey. Soekmadji C, Hill AF, Wauben MH, Buzás EI, Di Vizio D, Gardiner C, Lötvall J, Sahoo S, Witwer KW Journal of extracellular vesicles 30370018 J Extracell Vesicles 2018
Autophagy Mediates Interleukin-1β Secretion in Human Neutrophils. Iula L, Keitelman IA, Sabbione F, Fuentes F, Guzman M, Galletti JG, Gerber PP, Ostrowski M, Geffner JR, Jancic CC, Trevani AS Frontiers in immunology 29515581 Front Immunol 2018
Advances, challenges, and opportunities in extracellular RNA biology: insights from the NIH exRNA Strategic Workshop. Li K, Rodosthenous RS, Kashanchi F, Gingeras T, Gould SJ, Kuo LS, Kurre P, Lee H, Leonard JN, Liu H, Lombo TB, Momma S, Nolan JP, Ochocinska MJ, Pegtel DM, Sadovsky Y, Sánchez-Madrid F, Valdes KM, Vickers KC, Weaver AM, Witwer KW, Zeng Y, Das S, Raffai RL, Howcroft TK JCI insight 29618663 JCI Insight 2018 Apr 5
Validated MicroRNA Target Databases: An Evaluation. Lee YJ, Kim V, Muth DC, Witwer KW Drug development research 26286669 Drug Dev Res 2015 Nov
Extracellular vesicles from human plasma dampen inflammation and promote tissue repair functions in macrophages. Adamczyk AM, Leicaj ML, Fabiano MP, Cabrerizo G, Bannoud N, Croci DO, Witwer KW, Remes Lenicov F, Ostrowski M, Pérez PS Journal of extracellular vesicles 37272889 J Extracell Vesicles 2023 Jun
Homosalate boosts the release of tumour-derived extracellular vesicles with protection against anchorage-loss property. Grisard E, Nevo N, Lescure A, Doll S, Corbé M, Jouve M, Lavieu G, Joliot A, Nery ED, Martin-Jaular L, Théry C Journal of extracellular vesicles 35790086 J Extracell Vesicles 2022 Jul
Extracellular vesicles from triple negative breast cancer promote pro-inflammatory macrophages associated with better clinical outcome. Tkach M, Thalmensi J, Timperi E, Gueguen P, Névo N, Grisard E, Sirven P, Cocozza F, Gouronnec A, Martin-Jaular L, Jouve M, Delisle F, Manel N, Rookhuizen DC, Guerin CL, Soumelis V, Romano E, Segura E, Théry C Proceedings of the National Academy of Sciences of the United States of America 35439048 Proc Natl Acad Sci U S A 2022 Apr 26
Ribonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components? Tosar JP, Cayota A, Eitan E, Halushka MK, Witwer KW Journal of extracellular vesicles 28326168 J Extracell Vesicles 2017
Updating the MISEV minimal requirements for extracellular vesicle studies: building bridges to reproducibility. Witwer KW, Soekmadji C, Hill AF, Wauben MH, Buzás EI, Di Vizio D, Falcon-Perez JM, Gardiner C, Hochberg F, Kurochkin IV, Lötvall J, Mathivanan S, Nieuwland R, Sahoo S, Tahara H, Torrecilhas AC, Weaver AM, Yin H, Zheng L, Gho YS, Quesenberry P, Théry C Journal of extracellular vesicles 29184626 J Extracell Vesicles 2017
miRNAs in platelet-poor blood plasma and purified RNA are highly stable: a confirmatory study. Muth DC, Powell BH, Zhao Z, Witwer KW BMC research notes 29728133 BMC Res Notes 2018 May 4
Induction of HIF-1α by HIV-1 Infection in CD4(+) T Cells Promotes Viral Replication and Drives Extracellular Vesicle-Mediated Inflammation. Duette G, Pereyra Gerber P, Rubione J, Perez PS, Landay AL, Crowe SM, Liao Z, Witwer KW, Holgado MP, Salido J, Geffner J, Sued O, Palmer CS, Ostrowski M mBio 30206166 mBio 2018 Sep 11
A Dynamic Interplay of Circulating Extracellular Vesicles and Galectin-1 Reprograms Viral Latency during HIV-1 Infection. Rubione J, Pérez PS, Czernikier A, Duette GA, Pereyra Gerber FP, Salido J, Fabiano MP, Ghiglione Y, Turk G, Laufer N, Cagnoni AJ, Pérez Sáez JM, Merlo JP, Pascuale C, Stupirski JC, Sued O, Varas-Godoy M, Lewin SR, Mariño KV, Rabinovich GA, Ostrowski M mBio 35943163 mBio 2022 Aug 30
Mutant Cas9-transcriptional activator activates HIV-1 in U1 cells in the presence and absence of LTR-specific guide RNAs. Kim V, Mears BM, Powell BH, Witwer KW Matters 28670581 Matters (Zur) 2017
Qualitative differences in T-cell activation by dendritic cell-derived extracellular vesicle subtypes. Tkach M, Kowal J, Zucchetti AE, Enserink L, Jouve M, Lankar D, Saitakis M, Martin-Jaular L, Théry C The EMBO journal 28923825 EMBO J 2017 Oct 16
Concise Review: Developing Best-Practice Models for the Therapeutic Use of Extracellular Vesicles. Reiner AT, Witwer KW, van Balkom BWM, de Beer J, Brodie C, Corteling RL, Gabrielsson S, Gimona M, Ibrahim AG, de Kleijn D, Lai CP, Lötvall J, Del Portillo HA, Reischl IG, Riazifar M, Salomon C, Tahara H, Toh WS, Wauben MHM, Yang VK, Yang Y, Yeo RWY, Yin H, Giebel B, Rohde E, Lim SK Stem cells translational medicine 28714557 Stem Cells Transl Med 2017 Aug
Astrocyte-shed extracellular vesicles regulate the peripheral leukocyte response to inflammatory brain lesions. Dickens AM, Tovar-Y-Romo LB, Yoo SW, Trout AL, Bae M, Kanmogne M, Megra B, Williams DW, Witwer KW, Gacias M, Tabatadze N, Cole RN, Casaccia P, Berman JW, Anthony DC, Haughey NJ Science signaling 28377412 Sci Signal 2017 Apr 4
Serum extracellular vesicle depletion processes affect release and infectivity of HIV-1 in culture. Liao Z, Muth DC, Eitan E, Travers M, Learman LN, Lehrmann E, Witwer KW Scientific reports 28566772 Sci Rep 2017 May 31
Extracellular vesicles or exosomes? On primacy, precision, and popularity influencing a choice of nomenclature. Witwer KW, Théry C Journal of extracellular vesicles 31489144 J Extracell Vesicles 2019
Specificities of exosome versus small ectosome secretion revealed by live intracellular tracking of CD63 and CD9. Mathieu M, Névo N, Jouve M, Valenzuela JI, Maurin M, Verweij FJ, Palmulli R, Lankar D, Dingli F, Loew D, Rubinstein E, Boncompain G, Perez F, Théry C Nature communications 34282141 Nat Commun 2021 Jul 19
Cytotoxicity of aqueous cigarette smoke extract is affected by properties of pipettes used to prepare the extract. Bernstein ED, Liao Z, Witwer KW Matters 32104671 Matters (Zur) 2019
Age-Related Changes in Plasma Extracellular Vesicle Characteristics and Internalization by Leukocytes. Eitan E, Green J, Bodogai M, Mode NA, Bæk R, Jørgensen MM, Freeman DW, Witwer KW, Zonderman AB, Biragyn A, Mattson MP, Noren Hooten N, Evans MK Scientific reports 28465537 Sci Rep 2017 May 2
Acetylcholinesterase is not a generic marker of extracellular vesicles. Liao Z, Jaular LM, Soueidi E, Jouve M, Muth DC, Schøyen TH, Seale T, Haughey NJ, Ostrowski M, Théry C, Witwer KW Journal of extracellular vesicles 31303981 J Extracell Vesicles 2019
Cigarette smoke-induced extracellular vesicles from dendritic cells alter T-cell activation and HIV replication. Russell AE, Liao Z, Tkach M, Tarwater PM, Ostrowski M, Théry C, Witwer KW Toxicology letters 35181468 Toxicol Lett 2022 May 1

This page last reviewed on April 14, 2025