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The search results on this publication page are automated on a monthly schedule based on acknowledgement of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.

Title Author Journal Name PubMedID Journal Abbreviation Publication Date
Global connectivity and local excitability changes underlie antidepressant effects of repetitive transcranial magnetic stimulation. Eshel N, Keller CJ, Wu W, Jiang J, Mills-Finnerty C, Huemer J, Wright R, Fonzo GA, Ichikawa N, Carreon D, Wong M, Yee A, Shpigel E, Guo Y, McTeague L, Maron-Katz A, Etkin A Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology 32053828 Neuropsychopharmacology 2020 May
Experimental suppression of transcranial magnetic stimulation-electroencephalography sensory potentials. Ross JM, Sarkar M, Keller CJ Human brain mapping 35770956 Hum Brain Mapp 2022 Dec 1
Editorial: Inter- and Intra-subject Variability in Brain Imaging and Decoding. Wei CS, Keller CJ, Li J, Lin YP, Nakanishi M, Wagner J, Wu W, Zhang Y, Jung TP Frontiers in computational neuroscience 34912203 Front Comput Neurosci 2021
Mapping cortical excitability in the human dorsolateral prefrontal cortex. Gogulski J, Cline CC, Ross JM, Truong J, Sarkar M, Parmigiani S, Keller CJ bioRxiv : the preprint server for biology 36711689 bioRxiv 2023 Nov 20
TMS provokes target-dependent intracranial rhythms across human cortical and subcortical sites. Solomon EA, Wang JB, Oya H, Howard MA, Trapp NT, Uitermarkt BD, Boes AD, Keller CJ bioRxiv : the preprint server for biology 37645954 bioRxiv 2023 Nov 19
Personalized Repetitive Transcranial Magnetic Stimulation for Depression. Gogulski J, Ross JM, Talbot A, Cline CC, Donati FL, Munot S, Kim N, Gibbs C, Bastin N, Yang J, Minasi C, Sarkar M, Truong J, Keller CJ Biological psychiatry. Cognitive neuroscience and neuroimaging 36792455 Biol Psychiatry Cogn Neurosci Neuroimaging 2023 Apr
Real-time optimization to enhance noninvasive cortical excitability assessment in the human dorsolateral prefrontal cortex. Parmigiani S, Cline CC, Sarkar M, Forman L, Truong J, Ross JM, Gogulski J, Keller CJ bioRxiv : the preprint server for biology 38853941 bioRxiv 2024 May 31
Theta-burst direct electrical stimulation remodels human brain networks. Huang Y, Zelmann R, Hadar P, Dezha-Peralta J, Richardson RM, Williams ZM, Cash SS, Keller CJ, Paulk AC Nature communications 39143083 Nat Commun 2024 Aug 14
TMS provokes target-dependent intracranial rhythms across human cortical and subcortical sites. Solomon EA, Wang JB, Oya H, Howard MA, Trapp NT, Uitermarkt BD, Boes AD, Keller CJ Brain stimulation 38821396 Brain Stimul 2024 May-Jun
Mapping cortical excitability in the human dorsolateral prefrontal cortex. Gogulski J, Cline CC, Ross JM, Truong J, Sarkar M, Parmigiani S, Keller CJ Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology 38865780 Clin Neurophysiol 2024 Aug
Reliability and Validity of Transcranial Magnetic Stimulation-Electroencephalography Biomarkers. Parmigiani S, Ross JM, Cline CC, Minasi CB, Gogulski J, Keller CJ Biological psychiatry. Cognitive neuroscience and neuroimaging 36894435 Biol Psychiatry Cogn Neurosci Neuroimaging 2023 Aug
Reliability of the TMS-evoked potential in dorsolateral prefrontal cortex. Gogulski J, Cline CC, Ross JM, Parmigiani S, Keller CJ bioRxiv : the preprint server for biology 37732239 bioRxiv 2023 Sep 5
Reliability of the TMS-evoked potential in dorsolateral prefrontal cortex. Gogulski J, Cline CC, Ross JM, Parmigiani S, Keller CJ Cerebral cortex (New York, N.Y. : 1991) 38596882 Cereb Cortex 2024 Apr 1
Direct cortical stimulation induces short-term plasticity of neural oscillations in humans. Munot S, Kim N, Huang Y, Keller CJ bioRxiv : the preprint server for biology 38014071 bioRxiv 2023 Nov 17
Sensory Entrained TMS (seTMS) enhances motor cortex excitability. Ross JM, Forman L, Gogulski J, Hassan U, Cline CC, Parmigiani S, Truong J, Hartford JW, Chen NF, Fujioka T, Makeig S, Pascual-Leone A, Keller CJ bioRxiv : the preprint server for biology 39651225 bioRxiv 2024 Nov 27
Neural effects of TMS trains on the human prefrontal cortex. Ross JM, Cline CC, Sarkar M, Truong J, Keller CJ bioRxiv : the preprint server for biology 36778457 bioRxiv 2023 Nov 22
Dorsolateral prefrontal cortex TMS evokes responses in the subgenual anterior cingulate cortex: Evidence from human intracranial EEG. Trapp NT, Liu X, Li Z, Bruss J, Keller CJ, Boes AD, Jiang J bioRxiv : the preprint server for biology 39763715 bioRxiv 2024 Dec 26
Psychometrics of the Children's Report of Parental Behavior Inventory among caregivers and youth with HIV. Rodriguez VJ, Kendall AD, Cohen MH, Nsanzimana S, Ingabire C, Remera E, Donenberg G Journal of family psychology : JFP : journal of the Division of Family Psychology of the American Psychological Association (Division 43) 38451718 J Fam Psychol 2024 Mar 7
The 3,4-methylenedioxymethamphetamine enhances early visual processing for salient socio-emotional stimuli. Haggarty CJ, Bershad AK, Kumar MK, Lee R, de Wit H The European journal of neuroscience 38637983 Eur J Neurosci 2024 Jun
Altered States and Social Bonds: Effects of MDMA and Serotonergic Psychedelics on Social Behavior as a Mechanism Underlying Substance-Assisted Therapy. Schmid Y, Bershad AK Biological psychiatry. Cognitive neuroscience and neuroimaging 38341085 Biol Psychiatry Cogn Neurosci Neuroimaging 2024 May
MDMA enhances positive affective responses to social feedback. Bershad AK, Hsu DT, de Wit H Journal of psychopharmacology (Oxford, England) 38279662 J Psychopharmacol 2024 Mar
Quantized multi-task learning for context-specific representations of gene network dynamics. Chen H, Venkatesh MS, Ortega JG, Mahesh SV, Nandi TN, Madduri RK, Pelka K, Theodoris CV bioRxiv : the preprint server for biology 39229018 bioRxiv 2024 Aug 19
Multiplex generation and single cell analysis of structural variants in a mammalian genome. Pinglay S, Lalanne JB, Daza RM, Koeppel J, Li X, Lee DS, Shendure J bioRxiv : the preprint server for biology 38405830 bioRxiv 2024 Feb 12
The prototypical interferonopathy: Aicardi-Goutières syndrome from bedside to bench. Hofer MJ, Modesti N, Coufal NG, Wang Q, Sase S, Miner JJ, Vanderver A, Bennett ML Immunological reviews 39473130 Immunol Rev 2024 Oct
Microglia replacement by ER-Hoxb8 conditionally immortalized macrophages provides insight into Aicardi-Goutières Syndrome neuropathology. Nemec KM, Uy G, Chaluvadi VS, Purnell FS, Elfayoumi B, O'Brien CA, Aisenberg WH, Lombroso SI, Guo X, Blank N, Oon CH, Yaqoob F, Temsamrit B, Rawat P, Thaiss CA, Wang Q, Bennett ML, Bennett FC bioRxiv : the preprint server for biology 39345609 bioRxiv 2024 Sep 20
Generalizable Links Between Borderline Personality Traits and Functional Connectivity. Shafiei G, Keller AS, Bertolero M, Shanmugan S, Bassett DS, Chen AA, Covitz S, Houghton A, Luo A, Mehta K, Salo T, Shinohara RT, Fair D, Hallquist MN, Satterthwaite TD Biological psychiatry 38460580 Biol Psychiatry 2024 Sep 15
Reproducible Sex Differences in Personalized Functional Network Topography in Youth. Keller AS, Sun KY, Francisco A, Robinson H, Beydler E, Bassett DS, Cieslak M, Cui Z, Davatzikos C, Fan Y, Gardner M, Kishton R, Kornfield SL, Larsen B, Li H, Linder I, Pines A, Pritschet L, Raznahan A, Roalf DR, Seidlitz J, Shafiei G, Shinohara RT, Wolf DH, Alexander-Bloch A, Satterthwaite TD, Shanmugan S bioRxiv : the preprint server for biology 39386637 bioRxiv 2024 Sep 29
ComBatLS: A location- and scale-preserving method for multi-site image harmonization. Gardner M, Shinohara RT, Bethlehem RAI, Romero-Garcia R, Warrier V, Dorfschmidt L, Lifespan Brain Chart Consortium, Shanmugan S, Thompson P, Seidlitz J, Alexander-Bloch AF, Chen AA bioRxiv : the preprint server for biology 39131292 bioRxiv 2024 Jul 30
A spatiotemporal map of co-receptor signaling networks underlying B cell activation. Susa KJ, Bradshaw GA, Eisert RJ, Schilling CM, Kalocsay M, Blacklow SC, Kruse AC Cell reports 38850533 Cell Rep 2024 Jun 25
Tetraspanins: structure, dynamics, and principles of partner-protein recognition. Susa KJ, Kruse AC, Blacklow SC Trends in cell biology 37783654 Trends Cell Biol 2024 Jun
UBR5 forms ligand-dependent complexes on chromatin to regulate nuclear hormone receptor stability. Tsai JM, Aguirre JD, Li YD, Brown J, Focht V, Kater L, Kempf G, Sandoval B, Schmitt S, Rutter JC, Galli P, Sandate CR, Cutler JA, Zou C, Donovan KA, Lumpkin RJ, Cavadini S, Park PMC, Sievers Q, Hatton C, Ener E, Regalado BD, Sperling MT, Słabicki M, Kim J, Zon R, Zhang Z, Miller PG, Belizaire R, Sperling AS, Fischer ES, Irizarry R, Armstrong SA, Thomä NH, Ebert BL Molecular cell 37478846 Mol Cell 2023 Aug 3
Microglial senescence contributes to female-biased neuroinflammation in the aging mouse hippocampus: implications for Alzheimer's disease. Ocañas SR, Pham KD, Cox JEJ, Keck AW, Ko S, Ampadu FA, Porter HL, Ansere VA, Kulpa A, Kellogg CM, Machalinski AH, Chucair-Elliott AJ, Freeman WM bioRxiv : the preprint server for biology 36945656 bioRxiv 2023 Jun 1
Flow Cytometry Analysis of Microglial Phenotypes in the Murine Brain During Aging and Disease. Cox JEJ, Pham KD, Keck AW, Wright Z, Thomas MA, Freeman WM, Ocañas SR Bio-protocol 38948260 Bio Protoc 2024 Jun 20
Specificity and efficiency of tamoxifen-mediated Cre induction is equivalent regardless of age. Kellogg CM, Pham K, Ko S, Cox JEJ, Machalinski AH, Stout MB, Sharpe AL, Beckstead MJ, Chucair-Elliott AJ, Ocañas SR, Freeman WM iScience 38058312 iScience 2023 Dec 15
Role of Estrogen Receptor α in Aging and Chronic Disease. Isola JVV, Ko S, Ocañas SR, Stout MB Advances in geriatric medicine and research 37425648 Adv Geriatr Med Res 2023
Microglial MHC-I induction with aging and Alzheimer's is conserved in mouse models and humans. Kellogg CM, Pham K, Machalinski AH, Porter HL, Blankenship HE, Tooley KB, Stout MB, Rice HC, Sharpe AL, Beckstead MJ, Chucair-Elliott AJ, Ocañas SR, Freeman WM GeroScience 37393197 Geroscience 2023 Oct
Chromosomal and gonadal factors regulate microglial sex effects in the aging brain. Ocañas SR, Ansere VA, Kellogg CM, Isola JVV, Chucair-Elliott AJ, Freeman WM Brain research bulletin 36804773 Brain Res Bull 2023 Apr
Differential usage of DNA modifications in neurons, astrocytes, and microglia. Tooley KB, Chucair-Elliott AJ, Ocañas SR, Machalinski AH, Pham KD, Hoolehan W, Kulpa AM, Stanford DR, Freeman WM Epigenetics & chromatin 37953264 Epigenetics Chromatin 2023 Nov 13
Differential usage of DNA modifications in neurons, astrocytes, and microglia. Tooley KB, Chucair-Elliott AJ, Ocañas SR, Machalinski AH, Pham KD, Stanford DR, Freeman WM bioRxiv : the preprint server for biology 37333391 bioRxiv 2023 Jun 7
Microglial senescence contributes to female-biased neuroinflammation in the aging mouse hippocampus: implications for Alzheimer's disease. Ocañas SR, Pham KD, Cox JEJ, Keck AW, Ko S, Ampadu FA, Porter HL, Ansere VA, Kulpa A, Kellogg CM, Machalinski AH, Thomas MA, Wright Z, Chucair-Elliott AJ, Freeman WM Journal of neuroinflammation 37587511 J Neuroinflammation 2023 Aug 16
Microglial MHC-I induction with aging and Alzheimer's is conserved in mouse models and humans. Kellogg CM, Pham K, Machalinski AH, Porter HL, Blankenship HE, Tooley K, Stout MB, Rice HC, Sharpe AL, Beckstead MJ, Chucair-Elliott AJ, Ocañas SR, Freeman WM bioRxiv : the preprint server for biology 36945372 bioRxiv 2023 Jun 2
Leveraging individual power to improve racial equity in academia. Monari PK, Hammond ER, Malone CL, Cuarenta A, Hiura LC, Wallace KJ, Taylor L, Pradhan DS Hormones and behavior 37030195 Horm Behav 2023 Jun
Prairie vole pair bonding and plasticity of the social brain. Hiura LC, Donaldson ZR Trends in neurosciences 36369029 Trends Neurosci 2023 Apr
A universal method for the purification of C2H2 zinc finger arrays. Liang J, Azubel M, Wang G, Nie Y, Kornberg RD, Beel AJ, Mattei PJ PloS one 39903729 PLoS One 2025
Cell-type-specific prediction of 3D chromatin organization enables high-throughput in silico genetic screening. Tan J, Shenker-Tauris N, Rodriguez-Hernaez J, Wang E, Sakellaropoulos T, Boccalatte F, Thandapani P, Skok J, Aifantis I, Fenyö D, Xia B, Tsirigos A Nature biotechnology 36624151 Nat Biotechnol 2023 Aug
On the genetic basis of tail-loss evolution in humans and apes. Xia B, Zhang W, Zhao G, Zhang X, Bai J, Brosh R, Wudzinska A, Huang E, Ashe H, Ellis G, Pour M, Zhao Y, Coelho C, Zhu Y, Miller A, Dasen JS, Maurano MT, Kim SY, Boeke JD, Yanai I Nature 38418917 Nature 2024 Feb
Cellular dynamics in pig-to-human kidney xenotransplantation. Pan W, Zhang W, Zheng B, Camellato BR, Stern J, Lin Z, Khodadadi-Jamayran A, Kim J, Sommer P, Khalil K, Weldon E, Bai J, Zhu Y, Meyn P, Heguy A, Mangiola M, Griesemer A, Keating BJ, Montgomery RA, Xia B, Boeke JD Med (New York, N.Y.) 38776915 Med 2024 Aug 9
Dietary Interventions in Cancer Treatment and Response: A Comprehensive Review. Mercier BD, Tizpa E, Philip EJ, Feng Q, Huang Z, Thomas RM, Pal SK, Dorff TB, Li YR Cancers 36291933 Cancers (Basel) 2022 Oct 20
Key takeaways for knowledge expansion of early-career scientists conducting Transdisciplinary Research in Energetics and Cancer (TREC): a report from the TREC Training Workshop 2022. Kung CP, Skiba MB, Crosby EJ, Gorzelitz J, Kennedy MA, Kerr BA, Li YR, Nash S, Potiaumpai M, Kleckner AS, James DL, Coleman MF, Fairman CM, Galván GC, Garcia DO, Gordon MJ, His M, Hornbuckle LM, Kim SY, Kim TH, Kumar A, Mahé M, McDonnell KK, Moore J, Oh S, Sun X, Irwin ML Journal of the National Cancer Institute. Monographs 37139978 J Natl Cancer Inst Monogr 2023 May 4
Ignorance is Bliss? A Case of Incidental Discovery of ATM Mutation in Prostate Cancer. Tam A, Li YR International journal of radiation oncology, biology, physics 38049230 Int J Radiat Oncol Biol Phys 2024 Jan 1
Experience From an Early Exposure Education Program in Radiation Oncology for High School and Undergraduate Students. Tam A, Ladbury C, Glaser S, Amini A, Chen YJ, Li YR Practical radiation oncology 38810923 Pract Radiat Oncol 2024 Nov-Dec
Grade 5 Radiation Necrosis After Whole-Brain Radiation Therapy. Tam A, Li YR, Williams T, Yoon S Practical radiation oncology 38431371 Pract Radiat Oncol 2024 Mar-Apr
Explainable Artificial Intelligence to Identify Dosimetric Predictors of Toxicity in Patients with Locally Advanced Non-Small Cell Lung Cancer: A Secondary Analysis of RTOG 0617. Ladbury C, Li R, Danesharasteh A, Ertem Z, Tam A, Liu J, Hao C, Li R, McGee H, Sampath S, Williams T, Glaser S, Khasawneh M, Liao Z, Lee P, Ryckman J, Shaikh P, Amini A International journal of radiation oncology, biology, physics 37406826 Int J Radiat Oncol Biol Phys 2023 Dec 1
Moving the Needle Forward in Genomically-Guided Precision Radiation Treatment. Tam A, Mercier BD, Thomas RM, Tizpa E, Wong IG, Shi J, Garg R, Hampel H, Gray SW, Williams T, Bazan JG, Li YR Cancers 38001574 Cancers (Basel) 2023 Nov 7
Intermittent fasting interventions to leverage metabolic and circadian mechanisms for cancer treatment and supportive care outcomes. Kalam F, James DL, Li YR, Coleman MF, Kiesel VA, Cespedes Feliciano EM, Hursting SD, Sears DD, Kleckner AS Journal of the National Cancer Institute. Monographs 37139971 J Natl Cancer Inst Monogr 2023 May 4
Stem-cell states converge in multistage cutaneous squamous cell carcinoma development. Taylor MA, Kandyba E, Halliwill K, Delrosario R, Khoroshkin M, Goodarzi H, Quigley D, Li YR, Wu D, Bollam SR, Mirzoeva OK, Akhurst RJ, Balmain A Science (New York, N.Y.) 38815020 Science 2024 May 31
Residential Proximity to Oil and Gas Development and Mental Health in a North American Preconception Cohort Study: 2013-2023. Willis MD, Campbell EJ, Selbe S, Koenig MR, Gradus JL, Nillni YI, Casey JA, Deziel NC, Hatch EE, Wesselink AK, Wise LA American journal of public health 38991173 Am J Public Health 2024 Sep
Evaluating participant engagement in a preconception cohort study in relation to the Dobbs decision. Willis MD, Hoffman MN, Wang TR, Sabbath EL, Kuriyama AS, Wesselink AK, Wise LA Paediatric and perinatal epidemiology 38666636 Paediatr Perinat Epidemiol 2024 Sep
It's electric! An environmental equity perspective on the lifecycle of our energy sources. Willis MD, Cushing LJ, Buonocore JJ, Deziel NC, Casey JA Environmental epidemiology (Philadelphia, Pa.) 37064423 Environ Epidemiol 2023 Apr
Wildfires increasingly threaten oil and gas wells in the western United States with disproportionate impacts on marginalized populations. González DJX, Morello-Frosch R, Liu Z, Willis MD, Feng Y, McKenzie LM, Steiger BB, Wang J, Deziel NC, Casey JA One earth (Cambridge, Mass.) 39036466 One Earth 2024 Jun 21
Evolutionary-Scale Enzymology Enables Biochemical Constant Prediction Across a Multi-Peaked Catalytic Landscape. Muir DF, Asper GPR, Notin P, Posner JA, Marks DS, Keiser MJ, Pinney MM bioRxiv : the preprint server for biology 39484523 bioRxiv 2024 Oct 25
Kidney collecting duct-derived vasopressin is not essential for appropriate concentration or dilution of urine. Zuchowski Y, Carty JS, Trapani JB, Watts JA, Bock F, Zhang M, Terker AS, Zent R, Delpire E, Harris RC, Arroyo JP American journal of physiology. Renal physiology 38695074 Am J Physiol Renal Physiol 2024 Jun 1
Bicarbonate is the primary inducer of KCC3a expression in renal cortical B-type intercalated cells. Ferdaus MZ, Terker AS, Koumangoye R, Wall SM, Delpire E American journal of physiology. Cell physiology 37036298 Am J Physiol Cell Physiol 2023 May 1
Disruption of mitochondrial electron transport impairs urinary concentration via AMPK-dependent suppression of aquaporin 2. Carty JS, Bessho R, Zuchowski Y, Trapani JB, Davidoff O, Kobayashi H, Roland JT, Watts JA, Terker AS, Bock F, Arroyo JP, Haase VH JCI insight 39361429 JCI Insight 2024 Nov 22
Rac1 promotes kidney collecting duct repair by mechanically coupling cell morphology to mitotic entry. Bock F, Dong X, Li S, Viquez OM, Sha E, Tantengco M, Hennen EM, Plosa E, Ramezani A, Brown KL, Whang YM, Terker AS, Arroyo JP, Harrison DG, Fogo A, Brakebusch CH, Pozzi A, Zent R Science advances 38324689 Sci Adv 2024 Feb 9
VU6036720: The First Potent and Selective In Vitro Inhibitor of Heteromeric Kir4.1/5.1 Inward Rectifier Potassium Channels. McClenahan SJ, Kent CN, Kharade SV, Isaeva E, Williams JC, Han C, Terker A, Gresham R 3rd, Lazarenko RM, Days EL, Romaine IM, Bauer JA, Boutaud O, Sulikowski GA, Harris R, Weaver CD, Staruschenko A, Lindsley CW, Denton JS Molecular pharmacology 35246480 Mol Pharmacol 2022 May
Kir4.2 mediates proximal potassium effects on glutaminase activity and kidney injury. Terker AS, Zhang Y, Arroyo JP, Cao S, Wang S, Fan X, Denton JS, Zhang MZ, Harris RC Cell reports 36543132 Cell Rep 2022 Dec 20
Insulin-regulated aminopeptidase is required for water excretion in response to acute hypotonic stress. Zuchowski Y, Carty J, Terker AS, Bock F, Trapani JB, Bhave G, Watts JA, Keller S, Zhang M, Zent R, Harris RC, Arroyo JP American journal of physiology. Renal physiology 36995926 Am J Physiol Renal Physiol 2023 Jun 1
Low potassium activation of proximal mTOR/AKT signaling is mediated by Kir4.2. Zhang Y, Bock F, Ferdaus M, Arroyo JP, L Rose K, Patel P, Denton JS, Delpire E, Weinstein AM, Zhang MZ, Harris RC, Terker AS Nature communications 38886379 Nat Commun 2024 Jun 17
ESCRT recruitment to SARS-CoV-2 spike induces virus-like particles that improve mRNA vaccines. Hoffmann MAG, Yang Z, Huey-Tubman KE, Cohen AA, Gnanapragasam PNP, Nakatomi LM, Storm KN, Moon WJ, Lin PJC, West AP Jr, Bjorkman PJ Cell 37146611 Cell 2023 May 25
ESCRT recruitment to mRNA-encoded SARS-CoV-2 spike induces virus-like particles and enhanced antibody responses. Hoffmann MAG, Yang Z, Huey-Tubman KE, Cohen AA, Gnanapragasam PNP, Nakatomi LM, Storm KN, Moon WJ, Lin PJC, Bjorkman PJ bioRxiv : the preprint server for biology 36597535 bioRxiv 2022 Dec 27
N4BP1 coordinates ubiquitin-dependent crosstalk within the IκB kinase family to limit Toll-like receptor signaling and inflammation. Gitlin AD, Maltzman A, Kanno Y, Heger K, Reja R, Schubert AF, Wierciszewski LJ, Pantua H, Kapadia SB, Harris SF, Webster JD, Newton K, Dixit VM Immunity 38697117 Immunity 2024 May 14
Characteristics, Genetic Testing, and Diagnoses of Infants with Neonatal Encephalopathy Not Due to Hypoxic Ischemic Encephalopathy: A Cohort Study. Lenahan A, Mietzsch U, Wood TR, Callahan KP, Weiss EM, Miller DE, German K, Natarajan N, Puia-Dumitrescu M, Esposito V, Kolnik S, Law JB The Journal of pediatrics 37269901 J Pediatr 2023 Sep
Beyond the exome: What's next in diagnostic testing for Mendelian conditions. Wojcik MH, Reuter CM, Marwaha S, Mahmoud M, Duyzend MH, Barseghyan H, Yuan B, Boone PM, Groopman EE, Délot EC, Jain D, Sanchis-Juan A, Genomics Research to Elucidate the Genetics of Rare Diseases (GREGoR) Consortium, Starita LM, Talkowski M, Montgomery SB, Bamshad MJ, Chong JX, Wheeler MT, Berger SI, O'Donnell-Luria A, Sedlazeck FJ, Miller DE American journal of human genetics 37541186 Am J Hum Genet 2023 Aug 3
Advances in the discovery and analyses of human tandem repeats. Chaisson MJP, Sulovari A, Valdmanis PN, Miller DE, Eichler EE Emerging topics in life sciences 37905568 Emerg Top Life Sci 2023 Dec 14
CFAP47 is a novel causative gene implicated in X-linked polycystic kidney disease. Mori T, Fujimaru T, Liu C, Patterson K, Yamamoto K, Suzuki T, Chiga M, Sekine A, Ubara Y, Miller DE, Zalusky MP, Mandai S, Ando F, Mori Y, Kikuchi H, Susa K, University of Washington Center for Rare Disease Research, Chong JX, Bamshad MJ, Tan YQ, Zhang F, Uchida S, Sohara E medRxiv : the preprint server for health sciences 38633811 medRxiv 2024 Apr 5
Diagnostic utility of DNA methylation analysis in genetically unsolved pediatric epilepsies and CHD2 episignature refinement. LaFlamme CW, Rastin C, Sengupta S, Pennington HE, Russ-Hall SJ, Schneider AL, Bonkowski ES, Almanza Fuerte EP, Allan TJ, Zalusky MP, Goffena J, Gibson SB, Nyaga DM, Lieffering N, Hebbar M, Walker EV, Darnell D, Olsen SR, Kolekar P, Djekidel MN, Rosikiewicz W, McConkey H, Kerkhof J, Levy MA, Relator R, Lev D, Lerman-Sagie T, Park KL, Alders M, Cappuccio G, Chatron N, Demain L, Genevieve D, Lesca G, Roscioli T, Sanlaville D, Tedder ML, Gupta S, Jones EA, Weisz-Hubshman M, Ketkar S, Dai H, Worley KC, Rosenfeld JA, Chao HT, Undiagnosed Diseases Network, Neale G, Carvill GL, University of Washington Center for Rare Disease Research, Wang Z, Berkovic SF, Sadleir LG, Miller DE, Scheffer IE, Sadikovic B, Mefford HC Nature communications 39107278 Nat Commun 2024 Aug 6
3-hour genome sequencing and targeted analysis to rapidly assess genetic risk. Zalusky MP, Gustafson JA, Bohaczuk SC, Mallory B, Reed P, Wenger T, Beckman E, Chang IJ, Paschal CR, Buchan JG, Lockwood CM, Puia-Dumitrescu M, Garalde DR, Guillory J, Markham AJ, Bamshad MJ, Eichler EE, Stergachis AB, Miller DE Genetics in medicine open 39421454 Genet Med Open 2024
CFAP47 is Implicated in X-Linked Polycystic Kidney Disease. Mori T, Fujimaru T, Liu C, Patterson K, Yamamoto K, Suzuki T, Chiga M, Sekine A, Ubara Y, Miller DE, Zalusky MPG, Mandai S, Ando F, Mori Y, Kikuchi H, Susa K, University of Washington Center for Rare Disease Research, Chong JX, Bamshad MJ, Tan YQ, Zhang F, Uchida S, Sohara E Kidney international reports 39698362 Kidney Int Rep 2024 Dec
Congenital pleuropulmonary blastoma in a newborn with a variant of uncertain significance in DICER1 evaluated by RNA-sequencing. Lyle ANJ, Ohlsen TJD, Miller DE, Brown G, Waligorski N, Stark R, Taylor MR, Puia-Dumitrescu M Maternal health, neonatology and perinatology 36922881 Matern Health Neonatol Perinatol 2023 Mar 16
Long-Read Sequencing is Required for Precision Diagnosis of Incontinentia Pigmenti. Wojcik MH, Clark RD, Elias AF, Genetti CA, Madden JA, Simpson D, Golkar L, Zalusky MP, Miller AL, Rodriguez A, Goffena J, Dash CA, Damaraju N, Gibson SB, Storz SH, Anderson Z, Gustafson JA, Thiffault I, Farrow EG, Pastinen T, Lin J, Huang J, Beggs AH, Agrawal PB, Genomics Research to Elucidate the Genetics of Rare Diseases (GREGoR) Consortium, Miller DT, Miller DE Research square 39975911 Res Sq 2025 Jan 30
Combined approaches, including long-read sequencing, address the diagnostic challenge of HYDIN in primary ciliary dyskinesia. Fleming A, Galey M, Briggs L, Edwards M, Hogg C, John S, Wilkinson S, Quinn E, Rai R, Burgoyne T, Rogers A, Patel MP, Griffin P, Muller S, Carr SB, Loebinger MR, Lucas JS, Shah A, Jose R, Mitchison HM, Shoemark A, Miller DE, Morris-Rosendahl DJ European journal of human genetics : EJHG 38605126 Eur J Hum Genet 2024 Sep
Nanopore sequencing of 1000 Genomes Project samples to build a comprehensive catalog of human genetic variation. Gustafson JA, Gibson SB, Damaraju N, Zalusky MP, Hoekzema K, Twesigomwe D, Yang L, Snead AA, Richmond PA, De Coster W, Olson ND, Guarracino A, Li Q, Miller AL, Goffena J, Anderson Z, Storz SH, Ward SA, Sinha M, Gonzaga-Jauregui C, Clarke WE, Basile AO, Corvelo A, Reeves C, Helland A, Musunuri RL, Revsine M, Patterson KE, Paschal CR, Zakarian C, Goodwin S, Jensen TD, Robb E, 1000 Genomes ONT Sequencing Consortium, University of Washington Center for Rare Disease Research (UW-CRDR), Genomics Research to Elucidate the Genetics of Rare Diseases (GREGoR) Consortium, McCombie WR, Sedlazeck FJ, Zook JM, Montgomery SB, Garrison E, Kolmogorov M, Schatz MC, McLaughlin RN Jr, Dashnow H, Zody MC, Loose M, Jain M, Eichler EE, Miller DE medRxiv : the preprint server for health sciences 38496498 medRxiv 2024 Mar 7
Applications of long-read sequencing to Mendelian genetics. Mastrorosa FK, Miller DE, Eichler EE Genome medicine 37316925 Genome Med 2023 Jun 14
Long-Read DNA and RNA Sequencing to Streamline Clinical Genetic Testing and Reduce Barriers to Comprehensive Genetic Testing. Damaraju N, Miller AL, Miller DE The journal of applied laboratory medicine 38167773 J Appl Lab Med 2024 Jan 3
Heterozygous inversion breakpoints suppress meiotic crossovers by altering recombination repair outcomes. Li H, Berent E, Hadjipanteli S, Galey M, Muhammad-Lahbabi N, Miller DE, Crown KN PLoS genetics 37053290 PLoS Genet 2023 Apr
GENOME REPORT: Chromosome-scale genome assembly of the African spiny mouse ( Acomys cahirinus ). Nguyen ED, Fard VN, Kim BY, Collins S, Galey M, Nelson BR, Wakenight P, Gable SM, McKenna A, Bammler TK, MacDonald J, Okamura DM, Shendure J, Beier DR, Ramirez JM, Majesky MW, Millen KJ, Tollis M, Miller DE bioRxiv : the preprint server for biology 37066261 bioRxiv 2023 Apr 5
Beyond the exome: what's next in diagnostic testing for Mendelian conditions. Wojcik MH, Reuter CM, Marwaha S, Mahmoud M, Duyzend MH, Barseghyan H, Yuan B, Boone PM, Groopman EE, Délot EC, Jain D, Sanchis-Juan A, Genomics Research to Elucidate the Genetics of Rare Diseases (GREGoR) Consortium, Starita LM, Talkowski M, Montgomery SB, Bamshad MJ, Chong JX, Wheeler MT, Berger SI, O'Donnell-Luria A, Sedlazeck FJ, Miller DE ArXiv 36713248 ArXiv 2023 Jan 18
Clinical RNA sequencing clarifies variants of uncertain significance identified by prior testing. Marquez J, Cech JN, Paschal CR, Dingmann B, Scott AI, Thies JM, Mills MR, Albert CM, Beck AE, Beckman E, Bonkowski ES, Earl DL, Lam CT, Mefford HC, Merritt JL 2nd, Nelson Z, Ohlsen TJ, Taylor MR, Perlman SJ, Rudzinski ER, Sikes MC, Waligorski N, Wenger TL, Adam MP, Mirzaa GM, Bennett JT, Glass IA, Sternen DL, Miller DE Genetics in medicine open 39484203 Genet Med Open 2024
Long-read sequencing of hundreds of diverse brains provides insight into the impact of structural variation on gene expression and DNA methylation. Billingsley KJ, Meredith M, Daida K, Jerez PA, Negi S, Malik L, Genner RM, Moller A, Zheng X, Gibson SB, Mastoras M, Baker B, Kouam C, Paquette K, Jarreau P, Makarious MB, Moore A, Hong S, Vitale D, Shah S, Monlong J, Pantazis CB, Asri M, Shafin K, Carnevali P, Marenco S, Auluck P, Mandal A, Miga KH, Rhie A, Reed X, Ding J, Cookson MR, Nalls M, Singleton A, Miller DE, Chaisson M, Timp W, Gibbs JR, Phillippy AM, Kolmogorov M, Jain M, Sedlazeck FJ, Paten B, Blauwendraat C bioRxiv : the preprint server for biology 39764002 bioRxiv 2024 Dec 17
High-coverage nanopore sequencing of samples from the 1000 Genomes Project to build a comprehensive catalog of human genetic variation. Gustafson JA, Gibson SB, Damaraju N, Zalusky MPG, Hoekzema K, Twesigomwe D, Yang L, Snead AA, Richmond PA, De Coster W, Olson ND, Guarracino A, Li Q, Miller AL, Goffena J, Anderson ZB, Storz SHR, Ward SA, Sinha M, Gonzaga-Jauregui C, Clarke WE, Basile AO, Corvelo A, Reeves C, Helland A, Musunuri RL, Revsine M, Patterson KE, Paschal CR, Zakarian C, Goodwin S, Jensen TD, Robb E, 1000 Genomes ONT Sequencing Consortium, University of Washington Center for Rare Disease Research (UW-CRDR), Genomics Research to Elucidate the Genetics of Rare Diseases (GREGoR) Consortium, McCombie WR, Sedlazeck FJ, Zook JM, Montgomery SB, Garrison E, Kolmogorov M, Schatz MC, McLaughlin RN Jr, Dashnow H, Zody MC, Loose M, Jain M, Eichler EE, Miller DE Genome research 39358015 Genome Res 2024 Nov 20
Panels, Exomes, Genomes, and More-Finding the Best Path Through the Diagnostic Odyssey. Lenahan AL, Squire AE, Miller DE Pediatric clinics of North America 37704349 Pediatr Clin North Am 2023 Oct
A distant global control region is essential for normal expression of anterior HOXA genes during mouse and human craniofacial development. Wilderman A, D'haene E, Baetens M, Yankee TN, Winchester EW, Glidden N, Roets E, Van Dorpe J, Janssens S, Miller DE, Galey M, Brown KM, Stottmann RW, Vergult S, Weaver KN, Brugmann SA, Cox TC, Cotney J Nature communications 38167838 Nat Commun 2024 Jan 2
Subdural hemorrhage, macrocephaly, rash, and developmental delay in an infant: A pathogenic variant in NLRP3 causes CINCA/NOMID. Koti AS, Lanis A, Finlayson S, Canny S, Feldman EA, Miller DE, Rosenwasser N, Scott AA, Wong SC, Feldman KW American journal of medical genetics. Part A 37548074 Am J Med Genet A 2023 Dec
Genome Report: chromosome-scale genome assembly of the African spiny mouse (Acomys cahirinus). Nguyen ED, Fard VN, Kim BY, Collins S, Galey M, Nelson BR, Wakenight P, Gable SM, McKenna A, Bammler TK, MacDonald J, Okamura DM, Shendure J, Beier DR, Ramirez JM, Majesky MW, Millen KJ, Tollis M, Miller DE G3 (Bethesda, Md.) 37552705 G3 (Bethesda) 2023 Sep 30
Senolytic CAR T cells reverse aging-associated defects in intestinal regeneration and fitness. Eskiocak O, Chowdhury S, Shah V, Nnuji-John E, Chung C, Boyer JA, Harris AS, Habel J, Sadelain M, Beyaz S, Amor C bioRxiv : the preprint server for biology 38529506 bioRxiv 2024 Mar 22
Prophylactic and long-lasting efficacy of senolytic CAR T cells against age-related metabolic dysfunction. Amor C, Fernández-Maestre I, Chowdhury S, Ho YJ, Nadella S, Graham C, Carrasco SE, Nnuji-John E, Feucht J, Hinterleitner C, Barthet VJA, Boyer JA, Mezzadra R, Wereski MG, Tuveson DA, Levine RL, Jones LW, Sadelain M, Lowe SW Nature aging 38267706 Nat Aging 2024 Mar
Prophylactic and long-lasting efficacy of senolytic CAR T cells against age-related metabolic dysfunction. Amor C, Fernández-Maestre I, Chowdhury S, Ho YJ, Nadella S, Graham C, Carrasco SE, Nnuji-John E, Feucht J, Hinterleitner C, Barthet VJA, Boyer JA, Mezzadra R, Wereski MG, Tuveson DA, Levine RL, Jones LW, Sadelain M, Lowe SW Research square 37841853 Res Sq 2023 Sep 26
Phenotypes and ontogeny of senescent hepatic stellate cells in metabolic dysfunction-associated steatohepatitis. Yashaswini CN, Qin T, Bhattacharya D, Amor C, Lowe S, Lujambio A, Wang S, Friedman SL Journal of hepatology 38508241 J Hepatol 2024 Aug
Spatially clustered type I interferon responses at injury borderzones. Ninh VK, Calcagno DM, Yu JD, Zhang B, Taghdiri N, Sehgal R, Mesfin JM, Chen CJ, Kalhor K, Toomu A, Duran JM, Adler E, Hu J, Zhang K, Christman KL, Fu Z, Bintu B, King KR Nature 39198639 Nature 2024 Sep
Systematic Review of Comparisons Between Plastic and Silicone Dilators: Revealing a Knowledge Gap. Morgan O, Lopez MD, Martinez AJC, Marshall DC, Schnur JB Sexual medicine reviews 36030181 Sex Med Rev 2022 Oct
Effects of trauma history on cancer-related screening, diagnosis, and treatment. Marshall DC, Carney LM, Hsieh K, Dickstein DR, Downes M, Chaudhari A, McVorran S, Montgomery GH, Schnur JB The Lancet. Oncology 37922933 Lancet Oncol 2023 Nov
A qualitative analysis of female patient perspectives on physician communication regarding sexual dysfunction associated with pelvic radiotherapy. Morgan O, Schnur J, Caban-Martinez AJ, Duenas-Lopez M, Huang M, Portelance L, Elkhadem A, Marshall DC The journal of sexual medicine 37037772 J Sex Med 2023 May 26
Systematic Review of Comparisons Between Plastic and Silicone Dilators: Revealing a Knowledge Gap. Morgan O, Lopez MD, Martinez AJC, Marshall DC, Schnur JB Sexual medicine reviews 37051960 Sex Med Rev 2022 Oct 1
Sex-Based Bias in Artificial Intelligence-Based Segmentation Models in Clinical Oncology. Doo FX, Naranjo WG, Kapouranis T, Thor M, Chao M, Yang X, Marshall DC Clinical oncology (Royal College of Radiologists (Great Britain)) 39874747 Clin Oncol (R Coll Radiol) 2025 Mar
Associations between pharmaceutical industry payments to physicians and prescription of PARP inhibitors in the United States. Murayama A, Marshall DC Gynecologic oncology 38147713 Gynecol Oncol 2024 Feb
Sexual health and treatment-related sexual dysfunction in sexual and gender minorities with prostate cancer. Dickstein DR, Edwards CR, Lehrer EJ, Tarras ES, Gallitto M, Sfakianos J, Galsky MD, Stock R, Safer JD, Rosser BRS, Marshall DC Nature reviews. Urology 37217695 Nat Rev Urol 2023 Jun
Gender-Affirming Surgery and Cancer: Considerations for Radiation Oncologists for Pelvic Radiation in Transfeminine Patients. Smart AC, Liu KX, Domogauer JD, Rodriguez-Russo C, Jones B, Dickstein DR, Mancias JD, Shiloh RY, Wintner A, Zietman AL, Marshall DC, Dyer MA, Russo AL International journal of radiation oncology, biology, physics 37230432 Int J Radiat Oncol Biol Phys 2023 Oct 1
Trauma-Informed Radiation Therapy: Implementation and Evaluation of a Sensitive Practice Tool for Female Patients Undergoing Radiotherapy for Breast Cancer. Marshall D, Green S, Jones BM, Starrs C, Montgomery GH, Minassian K, Wunder B, Force J, Schnur JB Journal of the American College of Radiology : JACR 36126825 J Am Coll Radiol 2022 Nov
Prophylactic feeding tube placement for squamous cell carcinoma of the head and neck. Kao DD, Ferrandino RM, Bauml JM, Marshall DC, Bakst R, Roof S, Park YA, Sigel KM Oral oncology 36326521 Oral Oncol 2022 Dec
Association between rheumatoid arthritis and risk of radiotherapy toxicity: a systematic review. Liebenberg N, McWilliam A, Kerns SL, Marshall DC, West CM BMJ oncology 39524982 BMJ Oncol 2024 Jan
Female erectile tissues and sexual dysfunction after pelvic radiotherapy: A scoping review. Marshall DC, Tarras ES, Ali A, Bloom J, Torres MA, Kahn JM CA: a cancer journal for clinicians 35298025 CA Cancer J Clin 2022 Jul
Effect of treatment interruptions on overall survival in patients with triple-negative breast cancer. Chow R, Hasan S, Choi JI, Fox J, Chhabra AM, Marshall DC, Bakst RL, Simone CB 2nd Journal of the National Cancer Institute 37399094 J Natl Cancer Inst 2023 Sep 7
Dose and fractionation regimen for brachytherapy boost in cervical cancer in the US. Hsieh K, Bloom JR, Dickstein DR, Hsieh C, Marshall D, Ghiassi-Nejad Z, Raince J, Lymberis S, Chadha M, Gupta V Gynecologic oncology 38052109 Gynecol Oncol 2024 Jan
Neutrophil-to-lymphocyte ratio as a predictor of surgical outcomes in head and neck cancer. Kao DD, Ferrandino RM, Roof SA, Marshall DC, Khan MN, Chai RL, Park YA, Sigel KM Head & neck 37204760 Head Neck 2023 Aug
Cuban American Perspectives on Sexual Dysfunction Following Pelvic Radiotherapy: A Qualitative Study. Duenas-Lopez M, Morgan O, Marshall DC, Carney L, Caban-Martinez A, Huang M, Portelance L, Schnur J Sexuality and disability 38948491 Sex Disabil 2023 Dec
Pharmaceutical industry payments and prescriptions of direct acting antiviral drugs for hepatitis C virus infection. Murayama A, Sigel KM, Tarras ES, Marshall DC Liver international : official journal of the International Association for the Study of the Liver 39310996 Liver Int 2024 Dec
Systematic Comparison of Pancreatic Ductal Adenocarcinoma Models Identifies a Conserved Highly Plastic Basal Cell State. Pitter KL, Grbovic-Huezo O, Joost S, Singhal A, Blum M, Wu K, Holm M, Ferrena A, Bhutkar A, Hudson A, Lecomte N, de Stanchina E, Chaligne R, Iacobuzio-Donahue CA, Pe'er D, Tammela T Cancer research 35952360 Cancer Res 2022 Oct 4
CRISPR/dCas9-KRAB-Mediated Suppression of S100b Restores p53-Mediated Apoptosis in Melanoma Cells. Roy Choudhury S, Heflin B, Taylor E, Koss B, Avaritt NL, Tackett AJ Cells 36899866 Cells 2023 Feb 24
Chemical inhibition of DNA-PKcs impairs the activation and cytotoxicity of CD4(+) helper and CD8(+) effector T cells. Azevedo-Pouly AC, Appell LE, Burdine L, Rogers LJ, Morehead LC, Fil D, Barker M, Rainwater RR, Waldrip ZJ, Koss B, Burdine MS Immunology and cell biology 37149747 Immunol Cell Biol 2023 Aug
Evolved histone tail regulates 53BP1 recruitment at damaged chromatin. Kelliher JL, Folkerts ML, Shen KV, Song W, Tengler K, Stiefel CM, Lee SO, Dray E, Zhao W, Koss B, Pannunzio NR, Leung JW Nature communications 38821984 Nat Commun 2024 May 31
CAR-T Therapies in Solid Tumors: Opportunities and Challenges. Guzman G, Reed MR, Bielamowicz K, Koss B, Rodriguez A Current oncology reports 36853475 Curr Oncol Rep 2023 May
Resveratrol induces major histocompatibility complex class I antigen presentation in a STING-dependent and independent manner in melanoma. Morehead LC, Koss B, Fil D, Heflin B, Garg S, Wallis KF, Tackett AJ, Miousse IR Molecular immunology 37837954 Mol Immunol 2023 Nov
Enhancer-activated RET confers protection against oxidative stress to KMT2A-rearranged acute myeloid leukemia. Frett B, Stephens KE, Koss B, Melnyk S, Farrar J, Saha D, Roy Choudhury S Cancer science 38226414 Cancer Sci 2024 Mar
Intravital 3D visualization and segmentation of murine neural networks at micron resolution. Lautman Z, Winetraub Y, Blacher E, Yu C, Terem I, Chibukhchyan A, Marshel JH, de la Zerda A Scientific reports 35907928 Sci Rep 2022 Jul 30
Gold Nanoprisms as Optical Coherence Tomography Contrast Agents in the Second Near-Infrared Window for Enhanced Angiography in Live Animals. Si P, Yuan E, Liba O, Winetraub Y, Yousefi S, SoRelle ED, Yecies DW, Dutta R, de la Zerda A ACS nano 30422624 ACS Nano 2018 Dec 26
Noninvasive virtual biopsy using micro-registered optical coherence tomography (OCT) in human subjects. Winetraub Y, Van Vleck A, Yuan E, Terem I, Zhao J, Yu C, Chan W, Do H, Shevidi S, Mao M, Yu J, Hong M, Blankenberg E, Rieger KE, Chu S, Aasi S, Sarin KY, de la Zerda A Science advances 38598626 Sci Adv 2024 Apr 12
In Vivo Molecular Optical Coherence Tomography of Lymphatic Vessel Endothelial Hyaluronan Receptors. Si P, Sen D, Dutta R, Yousefi S, Dalal R, Winetraub Y, Liba O, de la Zerda A Scientific reports 28439123 Sci Rep 2017 Apr 24
Real-Time Detection of Circulating Tumor Cells in Living Animals Using Functionalized Large Gold Nanorods. Dutta R, Liba O, SoRelle ED, Winetraub Y, Ramani VC, Jeffrey SS, Sledge GW, de la Zerda A Nano letters 30895796 Nano Lett 2019 Apr 10
Portraying emotions at their unfolding: a multilayered approach for probing dynamics of neural networks. Raz G, Winetraub Y, Jacob Y, Kinreich S, Maron-Katz A, Shaham G, Podlipsky I, Gilam G, Soreq E, Hendler T NeuroImage 22285693 Neuroimage 2012 Apr 2
Synchrony and specificity in the maternal and the paternal brain: relations to oxytocin and vasopressin. Atzil S, Hendler T, Zagoory-Sharon O, Winetraub Y, Feldman R Journal of the American Academy of Child and Adolescent Psychiatry 22840551 J Am Acad Child Adolesc Psychiatry 2012 Aug
High-fidelity, high-spatial-resolution diffusion magnetic resonance imaging of ex vivo whole human brain at ultra-high gradient strength with structured low-rank echo-planar imaging ghost correction. Ramos-Llordén G, Lobos RA, Kim TH, Tian Q, Witzel T, Lee HH, Scholz A, Keil B, Yendiki A, Bilgiç B, Haldar JP, Huang SY NMR in biomedicine 36106429 NMR Biomed 2023 Feb
Mapping the human connectome using diffusion MRI at 300 mT/m gradient strength: Methodological advances and scientific impact. Fan Q, Eichner C, Afzali M, Mueller L, Tax CMW, Davids M, Mahmutovic M, Keil B, Bilgic B, Setsompop K, Lee HH, Tian Q, Maffei C, Ramos-Llordén G, Nummenmaa A, Witzel T, Yendiki A, Song YQ, Huang CC, Lin CP, Weiskopf N, Anwander A, Jones DK, Rosen BR, Wald LL, Huang SY NeuroImage 35217204 Neuroimage 2022 Jul 1
Eddy current-induced artifact correction in high b-value ex vivo human brain diffusion MRI with dynamic field monitoring. Ramos-Llordén G, Park DJ, Kirsch JE, Scholz A, Keil B, Maffei C, Lee HH, Bilgic B, Edlow BL, Mekkaoui C, Yendiki A, Witzel T, Huang SY Magnetic resonance in medicine 37753621 Magn Reson Med 2024 Feb
Age-related alterations in human cortical microstructure across the lifespan: Insights from high-gradient diffusion MRI. Lee H, Lee HH, Ma Y, Eskandarian L, Gaudet K, Tian Q, Krijnen EA, Russo AW, Salat DH, Klawiter EC, Huang SY Aging cell 39118344 Aging Cell 2024 Nov
In vivo human neurite exchange imaging (NEXI) at 500 mT/m diffusion gradients. Chan KS, Ma Y, Lee H, Marques JP, Olesen J, Coelho S, Novikov DS, Jespersen S, Huang SY, Lee HH bioRxiv : the preprint server for biology 39763747 bioRxiv 2024 Dec 17
Scattering approach to diffusion quantifies axonal damage in brain injury. Abdollahzadeh A, Coronado-Leija R, Lee HH, Sierra A, Fieremans E, Novikov DS ArXiv 39975429 ArXiv 2025 Jan 30
Perivascular space diffusivity and brain microstructural measures are associated with circadian time and sleep quality. Brendstrup-Brix K, Ulv Larsen SM, Lee HH, Knudsen GM Journal of sleep research 38676409 J Sleep Res 2024 Dec
In vivo mapping of cellular resolution neuropathology in brain ischemia with diffusion MRI. Wu D, Lee HH, Ba R, Turnbill V, Wang X, Luo Y, Walczak P, Fieremans E, Novikov DS, Martin LJ, Northington FJ, Zhang J Science advances 39018390 Sci Adv 2024 Jul 19
Romer-EPTI: rotating-view motion-robust super-resolution EPTI for SNR-efficient distortion-free in-vivo mesoscale dMRI and microstructure imaging. Dong Z, Reese TG, Lee HH, Huang SY, Polimeni JR, Wald LL, Wang F bioRxiv : the preprint server for biology 38352481 bioRxiv 2024 Apr 1
Revealing membrane integrity and cell size from diffusion kurtosis time dependence. Lee HH, Novikov DS, Fieremans E, Huang SY Magnetic resonance in medicine 39473219 Magn Reson Med 2025 Mar
Romer-EPTI: Rotating-view motion-robust super-resolution EPTI for SNR-efficient distortion-free in-vivo mesoscale diffusion MRI and microstructure imaging. Dong Z, Reese TG, Lee HH, Huang SY, Polimeni JR, Wald LL, Wang F Magnetic resonance in medicine 39552568 Magn Reson Med 2025 Apr
Connectome 2.0: Developing the next-generation ultra-high gradient strength human MRI scanner for bridging studies of the micro-, meso- and macro-connectome. Huang SY, Witzel T, Keil B, Scholz A, Davids M, Dietz P, Rummert E, Ramb R, Kirsch JE, Yendiki A, Fan Q, Tian Q, Ramos-Llordén G, Lee HH, Nummenmaa A, Bilgic B, Setsompop K, Wang F, Avram AV, Komlosh M, Benjamini D, Magdoom KN, Pathak S, Schneider W, Novikov DS, Fieremans E, Tounekti S, Mekkaoui C, Augustinack J, Berger D, Shapson-Coe A, Lichtman J, Basser PJ, Wald LL, Rosen BR NeuroImage 34464739 Neuroimage 2021 Nov
The effects of axonal beading and undulation on axonal diameter estimation from diffusion MRI: Insights from simulations in human axons segmented from three-dimensional electron microscopy. Lee HH, Tian Q, Sheft M, Coronado-Leija R, Ramos-Llorden G, Abdollahzadeh A, Fieremans E, Novikov DS, Huang SY NMR in biomedicine 38168082 NMR Biomed 2024 Apr
DIMOND: DIffusion Model OptimizatioN with Deep Learning. Li Z, Li Z, Bilgic B, Lee HH, Ying K, Huang SY, Liao H, Tian Q Advanced science (Weinheim, Baden-Wurttemberg, Germany) 38634608 Adv Sci (Weinh) 2024 Jun
The influence of axonal beading and undulation on axonal diameter mapping. Lee HH, Tian Q, Sheft M, Coronado-Leija R, Ramos-Llorden G, Abdollahzadeh A, Fieremans E, Novikov DS, Huang SY bioRxiv : the preprint server for biology 37131702 bioRxiv 2023 Apr 19
Regional and racial/ethnic inequalities in public drinking water fluoride concentrations across the US. Hefferon R, Goin DE, Sarnat JA, Nigra AE Journal of exposure science & environmental epidemiology 37391608 J Expo Sci Environ Epidemiol 2024 Jan
Nationwide geospatial analysis of county racial and ethnic composition and public drinking water arsenic and uranium. Martinez-Morata I, Bostick BC, Conroy-Ben O, Duncan DT, Jones MR, Spaur M, Patterson KP, Prins SJ, Navas-Acien A, Nigra AE Nature communications 36460659 Nat Commun 2022 Dec 3
Geospatial Assessment of Racial/Ethnic Composition, Social Vulnerability, and Lead Water Service Lines in New York City. Nigra AE, Lieberman-Cribbin W, Bostick BC, Chillrud SN, Carrión D Environmental health perspectives 37646509 Environ Health Perspect 2023 Aug
Sociodemographic inequalities in uranium and other metals in community water systems across the USA, 2006-11: a cross-sectional study. Ravalli F, Yu Y, Bostick BC, Chillrud SN, Schilling K, Basu A, Navas-Acien A, Nigra AE The Lancet. Planetary health 35397220 Lancet Planet Health 2022 Apr
US drinking water quality: exposure risk profiles for seven legacy and emerging contaminants. Levin R, Villanueva CM, Beene D, Cradock AL, Donat-Vargas C, Lewis J, Martinez-Morata I, Minovi D, Nigra AE, Olson ED, Schaider LA, Ward MH, Deziel NC Journal of exposure science & environmental epidemiology 37739995 J Expo Sci Environ Epidemiol 2024 Jan
Association of Water Arsenic With Incident Diabetes in U.S. Adults: The Multi-Ethnic Study of Atherosclerosis and the Strong Heart Study. Spaur M, Galvez-Fernandez M, Chen Q, Lombard MA, Bostick BC, Factor-Litvak P, Fretts AM, Shea SJ, Navas-Acien A, Nigra AE Diabetes care 38656975 Diabetes Care 2024 Jul 1
Contribution of arsenic and uranium in private wells and community water systems to urinary biomarkers in US adults: The Strong Heart Study and the Multi-Ethnic Study of Atherosclerosis. Spaur M, Glabonjat RA, Schilling K, Lombard MA, Galvez-Fernandez M, Lieberman-Cribbin W, Hayek C, Ilievski V, Balac O, Izuchukwu C, Patterson K, Basu A, Bostick BC, Chen Q, Sanchez T, Navas-Acien A, Nigra AE Journal of exposure science & environmental epidemiology 37558699 J Expo Sci Environ Epidemiol 2024 Jan
Cross-sectional associations between drinking water arsenic and urinary inorganic arsenic in the United States: NHANES 2003-2014. Spaur M, Lombard MA, Ayotte JD, Bostick BC, Chillrud SN, Navas-Acien A, Nigra AE Environmental research 36963713 Environ Res 2023 Jun 15
Socioeconomic vulnerability and public water arsenic concentrations across the US. Nigra AE, Cazacu-De Luca A, Navas-Acien A Environmental pollution (Barking, Essex : 1987) 36084737 Environ Pollut 2022 Nov 15
Impact of lowering the US maximum contaminant level on arsenic exposure: Differences by race, region, and water arsenic in NHANES 2003-2014. Spaur M, Bostick BC, Chillrud SN, Factor-Litvak P, Navas-Acien A, Nigra AE Environmental pollution (Barking, Essex : 1987) 37331581 Environ Pollut 2023 Sep 15
Public drinking water contaminant estimates for birth cohorts in the Environmental Influences on Child Health Outcomes (ECHO) Cohort. Bloomquist TR, Spaur M, Cerna-Turoff I, Kress AM, Burjak M, Kupsco A, Casey JA, Herbstman JB, Nigra AE Journal of exposure science & environmental epidemiology 39098852 J Expo Sci Environ Epidemiol 2024 Aug 4
Profiling of the immune landscape in murine glioblastoma following blood brain/tumor barrier disruption with MR image-guided focused ultrasound. Sheybani ND, Witter AR, Garrison WJ, Miller GW, Price RJ, Bullock TNJ Journal of neuro-oncology 34734364 J Neurooncol 2022 Jan
Focused ultrasound for the treatment of glioblastoma. Roberts JW, Powlovich L, Sheybani N, LeBlang S Journal of neuro-oncology 35267132 J Neurooncol 2022 Apr
Solid Tumor Treatment via Augmentation of Bioactive C6 Ceramide Levels with Thermally Ablative Focused Ultrasound. Thim EA, Fox T, Deering T, Vass LR, Sheybani ND, Kester M, Price RJ bioRxiv : the preprint server for biology 36993445 bioRxiv 2023 Mar 23
Letter to the editor regarding "Translation of focused ultrasound for blood-brain barrier opening in glioma". Price RJ, Bullock TNJ, Sheybani ND Journal of controlled release : official journal of the Controlled Release Society 35780955 J Control Release 2022 Sep
Barriers to immune cell infiltration in tumors. Melssen MM, Sheybani ND, Leick KM, Slingluff CL Jr Journal for immunotherapy of cancer 37072352 J Immunother Cancer 2023 Apr
Applications of focused ultrasound-mediated blood-brain barrier opening. Gorick CM, Breza VR, Nowak KM, Cheng VWT, Fisher DG, Debski AC, Hoch MR, Demir ZEF, Tran NM, Schwartz MR, Sheybani ND, Price RJ Advanced drug delivery reviews 36272635 Adv Drug Deliv Rev 2022 Dec
Regenerative Potential of Mandibular Condyle Cartilage and Bone Cells Compared to Costal Cartilage Cells When Seeded in Novel Gelatin Based Hydrogels. Chin AR, Taboas JM, Almarza AJ Annals of biomedical engineering 33155145 Ann Biomed Eng 2021 May
Rapid Interactions of Widespread Brain Networks Characterize Semantic Cognition. Aboud KS, Nguyen TQ, Del Tufo SN, Chang C, Zald DH, Key AP, Price GR, Landman BA, Cutting LE The Journal of neuroscience : the official journal of the Society for Neuroscience 36384679 J Neurosci 2023 Jan 4
Proviral location affects cognate peptide-induced virus production and immune recognition of HIV-1-infected T cell clones. Dragoni F, Kwaa AK, Traut CC, Veenhuis RT, Woldemeskel BA, Camilo-Contreras A, Raymond HE, Dykema AG, Scully EP, Rosecrans AM, Smith KN, Bushman FD, Simonetti FR, Blankson JN The Journal of clinical investigation 37698927 J Clin Invest 2023 Nov 1
Cognate antigen engagement induces HIV-1 expression in latently infected CD4(+) T cells from people on long-term antiretroviral therapy. Moskovljevic M, Dragoni F, Board NL, Wu F, Lai J, Zhang H, White JR, Hoh R, Lynn K, Tebas P, Mounzer K, Deeks SG, Montaner LJ, Siliciano JD, Siliciano RF, Simonetti FR Immunity 39612916 Immunity 2024 Dec 10
The latent reservoir of inducible, infectious HIV-1 does not decrease despite decades of antiretroviral therapy. McMyn NF, Varriale J, Fray EJ, Zitzmann C, MacLeod H, Lai J, Singhal A, Moskovljevic M, Garcia MA, Lopez BM, Hariharan V, Rhodehouse K, Lynn K, Tebas P, Mounzer K, Montaner LJ, Benko E, Kovacs C, Hoh R, Simonetti FR, Laird GM, Deeks SG, Ribeiro RM, Perelson AS, Siliciano RF, Siliciano JM The Journal of clinical investigation 37463049 J Clin Invest 2023 Sep 1
Learning from Persistent Viremia: Mechanisms and Implications for Clinical Care and HIV-1 Cure. Wu F, Simonetti FR Current HIV/AIDS reports 37955826 Curr HIV/AIDS Rep 2023 Dec
Last in first out: SIV proviruses seeded later in infection are harbored in short-lived CD4(+) T cells. Sambaturu N, Fray EJ, Wu F, Zitzmann C, Simonetti FR, Barouch DH, Siliciano JD, Siliciano RF, Ribeiro RM, Perelson AS, Molina-París C, Leitner T bioRxiv : the preprint server for biology 37961482 bioRxiv 2023 Nov 3
Antiretroviral therapy reveals triphasic decay of intact SIV genomes and persistence of ancestral variants. Fray EJ, Wu F, Simonetti FR, Zitzmann C, Sambaturu N, Molina-Paris C, Bender AM, Liu PT, Ventura JD, Wiseman RW, O'Connor DH, Geleziunas R, Leitner T, Ribeiro RM, Perelson AS, Barouch DH, Siliciano JD, Siliciano RF Cell host & microbe 36809762 Cell Host Microbe 2023 Mar 8
Clonally expanded HIV-1 proviruses with 5'-leader defects can give rise to nonsuppressible residual viremia. White JA, Wu F, Yasin S, Moskovljevic M, Varriale J, Dragoni F, Camilo-Contreras A, Duan J, Zheng MY, Tadzong NF, Patel HB, Quiambao JMC, Rhodehouse K, Zhang H, Lai J, Beg SA, Delannoy M, Kilcrease C, Hoffmann CJ, Poulin S, Chano F, Tremblay C, Cherian J, Barditch-Crovo P, Chida N, Moore RD, Summers MF, Siliciano RF, Siliciano JD, Simonetti FR The Journal of clinical investigation 36602866 J Clin Invest 2023 Mar 15
Bispecific antibodies promote natural killer cell-mediated elimination of HIV-1 reservoir cells. Board NL, Yuan Z, Wu F, Moskovljevic M, Ravi M, Sengupta S, Mun SS, Simonetti FR, Lai J, Tebas P, Lynn K, Hoh R, Deeks SG, Siliciano JD, Montaner LJ, Siliciano RF Nature immunology 38278966 Nat Immunol 2024 Mar
Prolonged quadriceps latency during gait early after anterior cruciate ligament injury predicts radiographic knee osteoarthritis 6-years after anterior cruciate ligament reconstruction. Ito N, Capin JJ, Arhos EK, Wellsandt E, Pohlig RT, Buchanan TS, Snyder-Mackler L Clinical biomechanics (Bristol, Avon) 38945068 Clin Biomech (Bristol) 2024 Jul
Midlife health crisis of former competitive athletes: dissecting their experiences via qualitative study. Capin JJ, Wolf TL, Street JH, Smith CS, Lennon SL, Farquhar WB, Hunter SK, Piacentine LB BMJ open sport & exercise medicine 38736641 BMJ Open Sport Exerc Med 2024
Long-term function, body composition and cardiometabolic health in midlife former athletes: a scoping review. Street JH, Boos ZP, Fial A, Lennon SL, Smith CS, Creasy SA, Hunter SK, Farquhar WB, Capin JJ BMJ open sport & exercise medicine 37920279 BMJ Open Sport Exerc Med 2023
Activity levels across the intensity spectrum in athletes: a systematic review protocol. Capin JJ, Ridgers ND, Street JH, Fial A, Tomkinson GR BMJ open sport & exercise medicine 39161555 BMJ Open Sport Exerc Med 2024
A caste differentiation mutant elucidates the evolution of socially parasitic ants. Trible W, Chandra V, Lacy KD, Limón G, McKenzie SK, Olivos-Cisneros L, Arsenault SV, Kronauer DJC Current biology : CB 36858043 Curr Biol 2023 Mar 27
The ORFIUS complex regulates ORC2 localization at replication origins. Yang Z, Mogre S, He R, Berdan EL, Ho Sui SJ, Hill SJ NAR cancer 38288445 NAR Cancer 2024 Mar
Enhanced Efficacy of Aurora Kinase Inhibitors in G2/M Checkpoint Deficient TP53 Mutant Uterine Carcinomas Is Linked to the Summation of LKB1-AKT-p53 Interactions. Lynch KN, Liu JF, Kesten N, Chow KH, Shetty A, He R, Afreen MF, Yuan L, Matulonis UA, Growdon WB, Muto MG, Horowitz NS, Feltmate CM, Worley MJ Jr, Berkowitz RS, Crum CP, Rueda BR, Hill SJ Cancers 34063609 Cancers (Basel) 2021 May 3
Enhanced Efficacy of Simultaneous PD-1 and PD-L1 Immune Checkpoint Blockade in High-Grade Serous Ovarian Cancer. Wan C, Keany MP, Dong H, Al-Alem LF, Pandya UM, Lazo S, Boehnke K, Lynch KN, Xu R, Zarrella DT, Gu S, Cejas P, Lim K, Long HW, Elias KM, Horowitz NS, Feltmate CM, Muto MG, Worley MJ Jr, Berkowitz RS, Matulonis UA, Nucci MR, Crum CP, Rueda BR, Brown M, Liu XS, Hill SJ Cancer research 33158814 Cancer Res 2021 Jan 1
Sialyl-Tn serves as a potential therapeutic target for ovarian cancer. Al-Alem L, Prendergast JM, Clark J, Zarrella B, Zarrella DT, Hill SJ, Growdon WB, Pooladanda V, Spriggs DR, Cramer D, Elias KM, Nazer RI, Skates SJ, Behrens J, Dransfield DT, Rueda BR Journal of ovarian research 38566237 J Ovarian Res 2024 Apr 2
Functional profiling of p53 and RB cell cycle regulatory proficiency suggests mechanism-driven molecular stratification in endometrial carcinoma. Yang Z, Mogre S, Jun H, He R, Ghosh Chaudhary S, Bhattarai UR, Ho Sui SJ, Matulonis UA, Lazo S, Shetty A, Cameron A, Nguyen QD, Hill SJ Cancer research communications 39932274 Cancer Res Commun 2025 Feb 11
Germline and Somatic Fumarate Hydratase Testing in Atypical Uterine Leiomyomata. Kipnis LM, Breen KM, Koeller DR, Levine AS, Yang Z, Jun H, Tayob N, Stokes SM, Hayes CP, Ghazani AA, Hill SJ, Rana HQ Cancer prevention research (Philadelphia, Pa.) 38638033 Cancer Prev Res (Phila) 2024 May 2
Targeting Galectin 3 illuminates its contributions to the pathology of uterine serous carcinoma. Matoba Y, Zarrella DT, Pooladanda V, Azimi Mohammadabadi M, Kim E, Kumar S, Xu M, Qin X, Ray LJ, Devins KM, Kumar R, Kononenko A, Eisenhauer E, Veillard IE, Yamagami W, Hill SJ, Sarosiek KA, Yeku OO, Spriggs DR, Rueda BR British journal of cancer 38438589 Br J Cancer 2024 May
Structural indicators of suicide: an exploration of state-level risk factors among Black and White people in the United States, 2015-2019. Robertson RA, Standley CJ, Gunn JF 3rd, Opara I Journal of public mental health 36185543 J Public Ment Health 2022 Feb 10
Understanding Neighborhoods' Impact on Youth Substance Use and Mental Health Outcomes in Paterson, New Jersey: Protocol for a Community-Based Participatory Research Study. Opara I, R Leonard N, Thorpe D, Kershaw T JMIR research protocols 34047712 JMIR Res Protoc 2021 May 28
A latent profile analysis of psychological sense of community and ethnic identity among racial-ethnic minority young adults from the southwestern United States. Lardier DT Jr, Opara I, Roach E Journal of community psychology 34402065 J Community Psychol 2022 Mar
Teaching Note-#BlackGirlsMatter and the Social Work Curriculum: Integrating Intersectionality Within Social Work Education. Opara I, Brown TL Journal of social work education 36874948 J Soc Work Educ 2023
Measuring Intrapersonal Psychological Empowerment and Ethnic Identity: Highlighting Strengths of Urban Black Girls. Opara I, Lardier DT Jr, Garcia-Reid P, Reid RJ Youth & society 35813075 Youth Soc 2022 May
Young Adults at the National Epicenter of the COVID-19 Outbreak: Understanding the Impact and Future Challenges of Social Distancing on Mental Health Outcomes. Malik S, Opara I, Lardier DT Jr, Younger J, Greene RN International journal of environmental research and public health 38248498 Int J Environ Res Public Health 2023 Dec 26
Addressing Gendered Racism Against Black Girls Using a Strengths-Based Empowerment-Intersectional Framework for Sexual Health and Substance Use Prevention Programming. Opara I, Martin R, Hill AV, Calhoun A Health promotion practice 37166152 Health Promot Pract 2023 Jul
Relationship between suicide ideation and attempts, bully victimization, dating violence, and depressive symptoms among Black and Hispanic youth. Opara I, Weerakoon SM, Brooks Stephens JR, Choe T, Gunn JF 3rd, Thrasher SS Suicide & life-threatening behavior 37933468 Suicide Life Threat Behav 2025 Feb
Brief Parent-Child Substance Use Education Intervention for Black Families in Urban Cities in New Jersey: Protocol for a Formative Study Design. Opara I, Pierre K, Cayo S, Aneni K, Mwai C, Hogue A, Becker S JMIR research protocols 38722676 JMIR Res Protoc 2024 May 9
HIV knowledge and protective factors among racial-ethnic minority youth: Moderation by Ethnic identity and LGBQ+ identity. Lardier DT Jr, Opara I, Asabor EN, Bell F, Garcia-Reid P, Reid RJ Journal of LGBT youth 39131490 J LGBT Youth 2024
School Absenteeism and Neighborhood Deprivation and Threat: Utilizing the Child Opportunity Index to Assess for Neighborhood-Level Disparities in Passaic County, NJ. Opara I, Thorpe D, Lardier DT Jr Urban education 39669403 Urban Educ (Beverly Hills Calif) 2024 Nov
Intrapersonal psychological empowerment profiles on ethnic identity, social support, and lifetime drug use among Hispanic adolescent girls. Opara I, Lardier DT Jr, Fernandez Y, Garcia-Reid P, Reid RJ Journal of ethnicity in substance abuse 32787746 J Ethn Subst Abuse 2022 Jul-Sep
Intersectional Effects of Sexual Orientation Concealment, Internalized Homophobia, and Gender Expression on Sexual Identity and HIV Risk Among Sexual Minority Men of Color: A Path Analysis. Ramos SR, Lardier DT Jr, Opara I, Turpin RE, Boyd DT, Gutierrez JI Jr, Williams CN, Nelson LE, Kershaw T The Journal of the Association of Nurses in AIDS Care : JANAC 34101701 J Assoc Nurses AIDS Care 2021 Jul-Aug 01
Testing the Factor Structure of the Brief Sense of Community Scale among Black Girls and the Relationship with Ethnic Identity, Empowerment and Social Support. Opara I, Lardier DT, Garcia-Reid P, Reid RJ Children and youth services review 34305217 Child Youth Serv Rev 2021 Aug
A Spatial Analysis of Alcohol Outlet Density Type, Abandoned Properties, and Police Calls on Aggravated Assault Rates in a Northeastern U.S. City. Lardier DT, Opara I, Lin Y, Roach E, Herrera A, Garcia-Reid P, Reid RJ Substance use & misuse 34210249 Subst Use Misuse 2021
Learning from community-based HIV prevention to inform control and mitigation of the COVID-19 pandemic. Abrams JA, Rutledge J, Opara I Preventive medicine 36750159 Prev Med 2023 Apr
The Association Between Racial Attitudes, Alcohol Use and Mood Disorders Among Black Adolescents. Opara I, Lardier DT, Boyd D, Boateng ACO, Brawner BM Journal of prevention (2022) 36156761 J Prev (2022) 2023 Feb
Alcohol Use Cravings as a Mediator Between Associated Risk Factors on Increased Alcohol Use among Youth Adults in New York During the COVID-19 Pandemic. Opara I, Malik S, Lardier DT Jr, Gamble-George J, Kelly RJ, Okafor CN, Greene RN, Parisi D Alcoholism treatment quarterly 34898835 Alcohol Treat Q 2021
Sociopolitical control as a mediator between ethnic identity and social support on 30-day drug use among black girls. Opara I, Hill AV, Calhoun A, Francois M, Alves C, Garcia-Reid P, Reid RJ Journal of ethnicity in substance abuse 34533434 J Ethn Subst Abuse 2023 Jul-Sep
Role of the Intersections of Gender, Race and Sexual Orientation in the Association between Substance Use Behaviors and Sexually Transmitted Infections in a National Sample of Adults with Recent Criminal Legal Involvement. Harvey TD, Opara I, Wang EA International journal of environmental research and public health 35409785 Int J Environ Res Public Health 2022 Mar 30
A Systematic Review on Sexual Health and Drug Use Prevention Interventions for Black Girls. Opara I, Pierre K, Assan MA, Scheinfeld L, Alves C, Cross K, Lizarraga A, Brawner B International journal of environmental research and public health 35328864 Int J Environ Res Public Health 2022 Mar 8
How Black Teen Girls Navigate Social Media to Form Romantic Relationships. Weser VU, Opara I, Sands BE, Fernandes CF, Hieftje KD Social media + society 34858631 Soc Media Soc 2021 Jul 1
Associations between Parent-Child Communication on Sexual Health and Drug Use and Use of Drugs during Sex among Urban Black Youth. Boyd DT, Opara I, Quinn CR, Waller B, Ramos SR, Duncan DT International journal of environmental research and public health 34068128 Int J Environ Res Public Health 2021 May 13
Black Adolescent Females' Perceptions of PrEP for HIV Risk Reduction. Budge M, Opara I, Weser VU, Sands BE, Hieftje KD Journal of the International Association of Providers of AIDS Care 37853731 J Int Assoc Provid AIDS Care 2023 Jan-Dec
Adolescent Polysubstance Use and Co-Occurring Weapon Carrying, Bullying Victimization, and Depressive Symptomology: Patterns and Differences in the United States. Weerakoon SM, Henson-Garcia M, Abraham A, Vidot DC, Messiah SE, Opara I Child psychiatry and human development 37477824 Child Psychiatry Hum Dev 2023 Jul 21
A mixed-methods assessment of off-duty police shootings in a media-curated database. Asabor EN, Lett E, Mosely B, Boone CA, Sundaresan S, Wong TA, Majumder MS Health services research 37276031 Health Serv Res 2023 Aug
Sexual Health and Drug Use Prevention for Black Girls (The Dreamer Girls Project): Protocol for an Intervention Development. Opara I, Gabriel C, Duran-Becerra B, Bond K, Hill AV, Hussett-Richardson S, Alves C, Kershaw T JMIR research protocols 37556188 JMIR Res Protoc 2023 Aug 9
Examining the integrated model of the interpersonal-psychological theory of suicide and intersectionality theory among Black male adolescents. Douglas RD, Alli JO, Gaylord-Harden N, Opara I, Gilreath T Suicide & life-threatening behavior 38411036 Suicide Life Threat Behav 2025 Feb
Schools' Neighborhoods and Characteristics: Implications for Standardized Academic Achievement in Passaic, NJ's Elementary, Middle and High Schools. Opara I, Thorpe D, Lardier DT, Parisi D The Urban review 38463537 Urban Rev 2023 Sep
Utilizing Community-Centered Approaches to Address Black Maternal Mortality. Falako S, Okoli N, Boateng MO, Sandoval J, Gumudavelly D, Larsuel S, Opara I Health education & behavior : the official publication of the Society for Public Health Education 37525982 Health Educ Behav 2023 Aug
Ethnic Identity as a Moderator Between HIV Knowledge, Viral Hepatitis Knowledge, and Psychological Antecedents Among Racial-Ethnic Minority Youth Living in an Urban Community. Opara I, Lardier DT Jr, Durkee MI, Garcia-Reid P, Reid RJ Journal of racial and ethnic health disparities 34041704 J Racial Ethn Health Disparities 2022 Aug
Mental Health Burden among Black Adolescents: The Need for Better Assessment, Diagnosis and Treatment Engagement. Opara I, Weissinger GM, Lardier DT Jr, Lanier Y, Carter S, Brawner BM Social work in mental health 34248423 Soc Work Ment Health 2021
Parenting profiles of academic and racial socialization: Associations with academic engagement and academic self-beliefs of African American adolescents. Metzger IW, Cooper SM, Griffin CB, Golden AR, Opara I, Ritchwood TD Journal of school psychology 32988462 J Sch Psychol 2020 Oct
Racial Differences in 1-Year Mortality after Hospitalization for Chronic Obstructive Pulmonary Disease in the United States. Jain S, Priya A, Pekow P, Spitzer K, Walkey AJ, Opara I, Krumholz HM, Lindenauer PK Annals of the American Thoracic Society 37943953 Ann Am Thorac Soc 2024 Apr
Coping in the Time of COVID-19: Buffering Stressors With Coping Strategies. Okafor CN, Bautista KJ, Asare M, Opara I Journal of loss & trauma 35173557 J Loss Trauma 2022
Effects of Brief Interventions on Internalizing Symptoms and Substance Use in Youth: A Systematic Review. McDanal R, Parisi D, Opara I, Schleider JL Clinical child and family psychology review 34731373 Clin Child Fam Psychol Rev 2022 Jun
Ethnic Identity, Empowerment, Social Support and Sexual Risk Behaviors Among Black Adolescent Girls: Examining Drug Use as a Mediator. Opara I, Rivera Rodas EI, Garcia-Reid P, Reid RJ Child & adolescent social work journal : C & A 35462639 Child Adolesc Social Work J 2022 Feb
Correction: Schools' Neighborhoods and Characteristics: Implications for Standardized Academic Achievement in Passaic, NJ's Elementary, Middle and High Schools. Opara I, Thorpe D, Lardier DT, Parisi D The Urban review 39474034 Urban Rev 2023 Sep
The brief sense of community scale: Testing dimensionality and measurement invariance by gender among Hispanic/Latinx youth. Lardier DT Jr, Opara I, Cantu I, Garcia-Reid P, Reid RJ Journal of community psychology 33938003 J Community Psychol 2022 Jan
Reframing Sexual Health for Black Girls and Women in HIV/STI Prevention Work: Highlighting the Role of Identity and Interpersonal Relationships. Opara I, Abrams JA, Cross K, Amutah-Onukagha N International journal of environmental research and public health 34831855 Int J Environ Res Public Health 2021 Nov 18
Symptoms of distress during the COVID-19 pandemic in the United States. Okafor CN, Asare M, Bautista KJ, Opara I American journal of health studies 34335012 Am J Health Stud 2021
What happens when we ask? A phenomenological focus group on HIV prevention and sexual health education among emancipated foster care youth. Opara I, Lizarraga A, Lardier DT, Herrera A, Garcia-Reid P, Reid RJ Children and youth services review 35910532 Child Youth Serv Rev 2022 Sep
Feeling Invisible and Unheard: A Qualitative Exploration of Gendered-Racist Stereotypes Influence on Sexual Decision Making and Mistreatment of Black Teen Girls. Opara I, Weser V, Sands B, Fernandes CF, Hussett-Richardson S, Hieftje K Youth & society 35812173 Youth Soc 2022 May
Increasing HIV/AIDS knowledge among urban ethnic minority youth: Findings from a community-based prevention intervention program. Lardier DT Jr, Opara I, Reid RJ, Garcia-Reid P, Herrera A, Cantu I Journal of HIV/AIDS & social services 34177389 J HIV AIDS Soc Serv 2021
Strong Black Women: Linking Stereotypes, Stress, and Overeating Among a Sample of Black Female College Students. Godbolt D, Opara I, Amutah-Onukagha N Journal of black studies 36710718 J Black Stud 2022 Sep
Assessing the Prevalence Rates of Internalizing Symptomatology Among Multiracial Adolescents in the United States: A Systematic Review. Henson-García M, Weerakoon SM, Duncan C, Choe T, Opara I, A Baker K, L Sterling K, Messiah SE Child psychiatry and human development 38042957 Child Psychiatry Hum Dev 2023 Dec 2
Psychological sense of community, community civic participation, and ethnic identity on social justice orientation and psychological empowerment between LGBQ and Non-LGBQ youth of color. Lardier DT, Opara I, Brammer MK, Pinto SA, Garcia-Reid P, Reid RJ Journal of LGBT youth 36855462 J LGBT Youth 2023
Racial/ethnic disparities in PM(2.5)-attributable cardiovascular mortality burden in the United States. Ma Y, Zang E, Opara I, Lu Y, Krumholz HM, Chen K Nature human behaviour 37653149 Nat Hum Behav 2023 Dec
"It Makes Me Feel like I Can Make a Difference": A Qualitative Exploration of Peer Mentoring with Black and Hispanic High School Students. Opara I, Metzger IW, Dawoud S, Pierre K, Assan MA, Garcia-Reid P, Reid RJ Youth (Basel, Switzerland) 39555142 Youth (Basel) 2023 Jun
Rewiring of human neurodevelopmental gene regulatory programs by human accelerated regions. Girskis KM, Stergachis AB, DeGennaro EM, Doan RN, Qian X, Johnson MB, Wang PP, Sejourne GM, Nagy MA, Pollina EA, Sousa AMM, Shin T, Kenny CJ, Scotellaro JL, Debo BM, Gonzalez DM, Rento LM, Yeh RC, Song JHT, Beaudin M, Fan J, Kharchenko PV, Sestan N, Greenberg ME, Walsh CA Neuron 34478631 Neuron 2021 Oct 20
Single-nucleoid architecture reveals heterogeneous packaging of mitochondrial DNA. Isaac RS, Tullius TW, Hansen KG, Dubocanin D, Couvillion M, Stergachis AB, Churchman LS Nature structural & molecular biology 38347148 Nat Struct Mol Biol 2024 Mar
DNA-m6A calling and integrated long-read epigenetic and genetic analysis with fibertools. Jha A, Bohaczuk SC, Mao Y, Ranchalis J, Mallory BJ, Min AT, Hamm MO, Swanson E, Dubocanin D, Finkbeiner C, Li T, Whittington D, Noble WS, Stergachis AB, Vollger MR Genome research 38849157 Genome Res 2024 Nov 20
RNA polymerases reshape chromatin architecture and couple transcription on individual fibers. Tullius TW, Isaac RS, Dubocanin D, Ranchalis J, Churchman LS, Stergachis AB Molecular cell 39191261 Mol Cell 2024 Sep 5
Centromeres in the thermotolerant yeast K. marxianus mediate attachment to a single microtubule. Barrero DJ, Hedouin S, Mao Y, Asbury CL, Stergachis A, O'Toole E, Biggins S bioRxiv : the preprint server for biology 39975131 bioRxiv 2025 Jan 27
DNA-m6A calling and integrated long-read epigenetic and genetic analysis with fibertools. Jha A, Bohaczuk SC, Mao Y, Ranchalis J, Mallory BJ, Min AT, Hamm MO, Swanson E, Dubocanin D, Finkbeiner C, Li T, Whittington D, Noble WS, Stergachis AB, Vollger MR bioRxiv : the preprint server for biology 37131601 bioRxiv 2023 Dec 11
Synchronized long-read genome, methylome, epigenome, and transcriptome for resolving a Mendelian condition. Vollger MR, Korlach J, Eldred KC, Swanson E, Underwood JG, Cheng YH, Ranchalis J, Mao Y, Blue EE, Schwarze U, Munson KM, Saunders CT, Wenger AM, Allworth A, Chanprasert S, Duerden BL, Glass I, Horike-Pyne M, Kim M, Leppig KA, McLaughlin IJ, Ogawa J, Rosenthal EA, Sheppeard S, Sherman SM, Strohbehn S, Yuen AL, University of Washington Center for Mendelian Genomics (UW-CMG), Undiagnosed Diseases Network (UDN), Reh TA, Byers PH, Bamshad MJ, Hisama FM, Jarvik GP, Sancak Y, Dipple KM, Stergachis AB bioRxiv : the preprint server for biology 37808736 bioRxiv 2023 Sep 27
RNA polymerases reshape chromatin and coordinate transcription on individual fibers. Tullius TW, Isaac RS, Ranchalis J, Dubocanin D, Churchman LS, Stergachis AB bioRxiv : the preprint server for biology 38187631 bioRxiv 2023 Dec 23
Resolving the chromatin impact of mosaic variants with targeted Fiber-seq. Bohaczuk SC, Amador ZJ, Li C, Mallory BJ, Swanson EG, Ranchalis J, Vollger MR, Munson KM, Walsh T, Hamm MO, Mao Y, Lieber A, Stergachis AB Genome research 39653420 Genome Res 2024 Dec 23
Stable centromere association of the yeast histone variant Cse4 requires its essential N-terminal domain. Popchock AR, Hedouin S, Mao Y, Asbury CL, Stergachis AB, Biggins S The EMBO journal 39809842 EMBO J 2025 Mar
Clinical utility of brain MRS imaging of patients with adult-onset non-cirrhotic hyperammonemia. Stergachis AB, Krier JB, Merugumala SK, Berry GT, Lin AP Molecular genetics and metabolism reports 33763331 Mol Genet Metab Rep 2021 Jun
Full-length isoform sequencing for resolving the molecular basis of Charcot-Marie-Tooth 2A. Stergachis AB, Blue EE, Gillentine MA, Wang LK, Schwarze U, Cortés AS, Ranchalis J, Allworth A, Bland AE, Chanprasert S, Chen J, Doherty D, Folta AB, Glass I, Horike-Pyne M, Huang AY, Khan AT, Leppig KA, Miller DE, Mirzaa G, Parhin A, Raskind W, Rosenthal EA, Sheppeard S, Strohbehn S, Sybert VP, Tran TT, Wener M, University of Washington Center for Mendelian Genomics (UW-CMG), Undiagnosed Diseases Network (UDN), Byers PH, Nelson SF, Bamshad MJ, Dipple KM, Jarvik GP, Hoppins S, Hisama FM bioRxiv : the preprint server for biology 36798371 bioRxiv 2023 Feb 7
Dominant-negative variant in SLC1A4 causes an autosomal dominant epilepsy syndrome. Pujol-Giménez J, Mirzaa G, Blue EE, Albano G, Miller DE, Allworth A, Bennett JT, Byers PH, Chanprasert S, Chen J, Doherty D, Folta AB, Gillentine MA, Glass I, Hing A, Horike-Pyne M, Leppig KA, Parhin A, Ranchalis J, Raskind WH, Rosenthal EA, Schwarze U, Sheppeard S, Strohbehn S, Sybert VP, Timms A, Wener M, University of Washington Center for Mendelian Genomics (UW-CMG)a, Undiagnosed Diseases Network (UDN), Bamshad MJ, Hisama FM, Jarvik GP, Dipple KM, Hediger MA, Stergachis AB Annals of clinical and translational neurology 37194416 Ann Clin Transl Neurol 2023 Jun
Resolving the chromatin impact of mosaic variants with targeted Fiber-seq. Bohaczuk SC, Amador ZJ, Li C, Mallory BJ, Swanson EG, Ranchalis J, Vollger MR, Munson KM, Walsh T, Hamm MO, Mao Y, Lieber A, Stergachis AB bioRxiv : the preprint server for biology 39026856 bioRxiv 2024 Jul 13
Single-cell multi-omics of human clonal hematopoiesis reveals that DNMT3A R882 mutations perturb early progenitor states through selective hypomethylation. Nam AS, Dusaj N, Izzo F, Murali R, Myers RM, Mouhieddine TH, Sotelo J, Benbarche S, Waarts M, Gaiti F, Tahri S, Levine R, Abdel-Wahab O, Godley LA, Chaligne R, Ghobrial I, Landau DA Nature genetics 36138229 Nat Genet 2022 Oct
CALR-mutated cells are vulnerable to combined inhibition of the proteasome and the endoplasmic reticulum stress response. Jutzi JS, Marneth AE, Jiménez-Santos MJ, Hem J, Guerra-Moreno A, Rolles B, Bhatt S, Myers SA, Carr SA, Hong Y, Pozdnyakova O, van Galen P, Al-Shahrour F, Nam AS, Mullally A Leukemia 36473980 Leukemia 2023 Feb
Integrating genetic and non-genetic determinants of cancer evolution by single-cell multi-omics. Nam AS, Chaligne R, Landau DA Nature reviews. Genetics 32807900 Nat Rev Genet 2021 Jan
Structural parasitology of the malaria parasite Plasmodium falciparum. Anton L, Cobb DW, Ho CM Trends in biochemical sciences 34887149 Trends Biochem Sci 2022 Feb
Native structure of the RhopH complex, a key determinant of malaria parasite nutrient acquisition. Ho CM, Jih J, Lai M, Li X, Goldberg DE, Beck JR, Zhou ZH Proceedings of the National Academy of Sciences of the United States of America 34446549 Proc Natl Acad Sci U S A 2021 Aug 31
Towards effective data sharing in ophthalmology: data standardization and data privacy. Halfpenny W, Baxter SL Current opinion in ophthalmology 35819893 Curr Opin Ophthalmol 2022 Sep 1
Training Deep Learning Models to Work on Multiple Devices by Cross-Domain Learning with No Additional Annotations. Wu Y, Olvera-Barrios A, Yanagihara R, Kung TH, Lu R, Leung I, Mishra AV, Nussinovitch H, Grimaldi G, Blazes M, Lee CS, Egan C, Tufail A, Lee AY Ophthalmology 36154868 Ophthalmology 2023 Feb
Impact of COVID-19 on the Delivery of Eye Care to Uninsured Diabetic Patients at a Student-Run Free Clinic: A Comprehensive Evaluation of Eye Clinic Performance. Chuter BG, Lieu A, Dayao JKO, Bu JJ, Chen K, Nishihara T, Baxter SL Journal of student-run clinics 36890867 J Stud Run Clin 2022 Dec 20
Evaluation of Depression and Anxiety in a Diverse Population With Thyroid Eye Disease Using the Nationwide NIH All of Us Database. Lee TC, Radha-Saseendrakumar B, Delavar A, Ye GY, Ting MA, Topilow NJ, Bass J, Korn BS, Kikkawa DO, Baxter SL, Liu CY Ophthalmic plastic and reconstructive surgery 36727790 Ophthalmic Plast Reconstr Surg 2023 May-Jun 01
Ocular Health and National Data Standards: A Case for Including Visual Acuity in the United States Core Data for Interoperability (USCDI). Baxter SL, Reed AA, Maa A, Boland MV, Borkar DS, Brown EN, Lum F, Goetz KE Ophthalmology science 36570621 Ophthalmol Sci 2022 Dec
Social Determinants of Health Data Availability for Patients with Eye Conditions. Lee TC, Saseendrakumar BR, Nayak M, Chan AX, McDermott JJ 4th, Shahrvini B, Ye GY, Sitapati AM, Nebeker C, Baxter SL Ophthalmology science 35662804 Ophthalmol Sci 2022 Jun
Internal carotid artery aneurysm presenting as diplopia via telemedicine during COVID-19. Baxter SL, Kuo DE, Robbins SL Journal of telemedicine and telecare 33412986 J Telemed Telecare 2022 May
Microperimetry Findings in Pentosan Polysulfate Maculopathy. Most J, Kalaw FGP, Walker E, Arias JD, Charng J, Baxter SL, Nudleman E, Ferreyra H, Freeman WR, Chen FK, Borooah S Ophthalmology. Retina 37619623 Ophthalmol Retina 2023 Nov
Social determinants of health and health disparities in glaucoma: A review. Acuff K, Wu JH, Varkhedi V, Baxter SL Clinical & experimental ophthalmology 38385607 Clin Exp Ophthalmol 2024 Apr
Ethical considerations for large language models in ophthalmology. Kalaw FGP, Baxter SL Current opinion in ophthalmology 39259616 Curr Opin Ophthalmol 2024 Nov 1
Impact of Pupil Dilation on Optical Coherence Tomography Angiography Retinal Microvasculature in Healthy Eyes. Villatoro G, Bowd C, Proudfoot JA, Manalastas PIC, Nguyen KD, Hou H, Penteado RC, Li AJ, Moghimi S, Ghahari E, Weinreb RN, Zangwill LM Journal of glaucoma 32890106 J Glaucoma 2020 Nov
Novel Association between Opioid Use and Increased Risk of Retinal Vein Occlusion Using the National Institutes of Health All of Us Research Program. McDermott JJ 4th, Lee TC, Chan AX, Ye GY, Shahrvini B, Saseendrakumar BR, Ferreyra H, Nudleman E, Baxter SL Ophthalmology science 35721456 Ophthalmol Sci 2022 Mar
Associations between healthcare utilization and access and diabetic retinopathy complications using All of Us nationwide survey data. Chan AX, McDermott Iv JJ, Lee TC, Ye GY, Shahrvini B, Radha Saseendrakumar B, Baxter SL PloS one 35704625 PLoS One 2022
Associations between Socioeconomic Factors and Visit Adherence among Patients with Glaucoma in the All of Us Research Program. Acuff K, Delavar A, Radha Saseendrakumar B, Wu JH, Weinreb RN, Baxter SL Ophthalmology. Glaucoma 36746242 Ophthalmol Glaucoma 2023 Jul-Aug
Social determinants associated with loss of an eye in the United States using the All of Us nationwide database. Chan AX, Radha Saseendrakumar B, Ozzello DJ, Ting M, Yoon JS, Liu CY, Korn BS, Kikkawa DO, Baxter SL Orbit (Amsterdam, Netherlands) 34969350 Orbit 2022 Dec
Investigation of associations between Piezo1 mechanoreceptor gain-of-function variants and glaucoma-related phenotypes in humans and mice. Baxter SL, Keenan WT, Athanas AJ, Proudfoot JA, Zangwill LM, Ayyagari R, Liebmann JM, Girkin CA, Patapoutian A, Weinreb RN Scientific reports 33149214 Sci Rep 2020 Nov 4
Associations of smoking and alcohol consumption with the development of open angle glaucoma: a retrospective cohort study. Mahmoudinezhad G, Nishida T, Weinreb RN, Baxter SL, Chang AC, Nikkhoy N, Walker E, Liebmann JM, Girkin CA, Moghimi S BMJ open 37793935 BMJ Open 2023 Oct 4
Evaluation and Optimization of Diabetic Retinopathy Screenings for Uninsured Latinx Patients in a Resource-Limited Student-Run Free Clinic. Bu JJ, Delavar A, Dayao JK, Lieu A, Chuter BG, Chen K, Nishihara T, Meller L, Camp AS, Lee JE, Baxter SL Journal of student-run clinics 38287932 J Stud Run Clin 2024 Jan 18
Evaluation of Publications from the American Academy of Ophthalmology: A 5-Year Analysis of Ophthalmology Literature. Kalaw FGP, Tavakoli K, Baxter SL Ophthalmology science 38025157 Ophthalmol Sci 2023 Dec
Implementation Mapping of the Collaborative University of California Teleophthalmology Initiative (CUTI): A Qualitative Study Using the Exploration, Preparation, Implementation, and Sustainment (EPIS) Framework. Radgoudarzi N, Gregg C, Quackenbush Q, Yiu G, Freeby M, Su G, Baxter S, Thorne C, Willard-Grace R Cureus 39119397 Cureus 2024 Jul
Gap Analysis of Glaucoma Examination Concept Representations within Standard Systemized Nomenclature of Medicine - Clinical Terms. Hallaj S, Khawaja AP, Rodrigues IAS, Boland MV, Brown EN, Chen A, Stagg BC, Stein JD, Sun CQ, Mahe-Cook AL, Swaminathan SS, Wang SY, Xu BY, Weinreb RN, Baxter SL Ophthalmology. Glaucoma 39147325 Ophthalmol Glaucoma 2025 Jan-Feb
RETINAL STRUCTURAL CHANGES AFTER CESSATION OF PENTOSAN POLYSULFATE SODIUM. Kalaw FGP, Most J, Kako RN, Sharma P, Arias JD, Chen JS, Lin AC, Walker E, Bartsch DG, Baxter SL, Ferreyra H, Freeman WR, Borooah S Retina (Philadelphia, Pa.) 39174300 Retina 2024 Nov 1
Assessing Usability of Smartwatch Digital Health Devices for Home Blood Pressure Monitoring among Glaucoma Patients. Bhanvadia SB, Brar MS, Delavar A, Tavakoli K, Saseendrakumar BR, Weinreb RN, Zangwill LM, Baxter SL Informatics (MDPI) 36873830 Informatics (MDPI) 2022 Dec
Racial Disparities in Barriers to Care for Patients With Diabetic Retinopathy in a Nationwide Cohort. Huang BB, Radha Saseendrakumar B, Delavar A, Baxter SL Translational vision science & technology 36928128 Transl Vis Sci Technol 2023 Mar 1
Availability of Physical Activity Tracking Data from Wearable Devices for Glaucoma Patients. Bhanvadia SB, Meller L, Madjedi K, Weinreb RN, Baxter SL Information (Basel) 37771713 Information (Basel) 2023 Sep
Racial, Ethnic, and Socioeconomic Disparities in Glaucoma Onset and Severity in a Diverse Nationwide Cohort in the United States. Acuff K, Radha Saseendrakumar B, Wu JH, Weinreb RN, Baxter SL Journal of glaucoma 37523618 J Glaucoma 2023 Sep 1
Implementing clinical informatics tools for primary care-based diabetic retinopathy screening. Baxter SL, Quackenbush Q, Cerda J, Gregg C, Millen M, Thorne C The American journal of managed care 36252175 Am J Manag Care 2022 Oct 1
Association of Electronic Health Record Inbasket Message Characteristics With Physician Burnout. Baxter SL, Saseendrakumar BR, Cheung M, Savides TJ, Longhurst CA, Sinsky CA, Millen M, Tai-Seale M JAMA network open 36449288 JAMA Netw Open 2022 Nov 1
Comparing the Use of DynaMed and UpToDate by Physician Trainees in Clinical Decision-Making: A Randomized Crossover Trial. Baxter SL, Lander L, Clay B, Bell J, Hansen K, Walker A, Tai-Seale M Applied clinical informatics 35108739 Appl Clin Inform 2022 Jan
Social and Health Care Utilization Factors Associated With Ophthalmic Visit Nonadherence in Glaucoma: An All of Us Study. Wu JH, Varkhedi V, Radha Saseendrakumar B, Acuff K, Weinreb RN, Baxter SL Journal of glaucoma 37671531 J Glaucoma 2023 Dec 1
Predictive Analytics for Glaucoma Using Data From the All of Us Research Program. Baxter SL, Saseendrakumar BR, Paul P, Kim J, Bonomi L, Kuo TT, Loperena R, Ratsimbazafy F, Boerwinkle E, Cicek M, Clark CR, Cohn E, Gebo K, Mayo K, Mockrin S, Schully SD, Ramirez A, Ohno-Machado L, All of Us Research Program Investigators American journal of ophthalmology 33497675 Am J Ophthalmol 2021 Jul
Gaps in standards for integrating artificial intelligence technologies into ophthalmic practice. Baxter SL, Lee AY Current opinion in ophthalmology 34231531 Curr Opin Ophthalmol 2021 Sep 1
Social Factors Associated with the Risk of Glaucoma Suspect Conversion to Glaucoma: Analysis of the Nationwide All of Us Program. Wu JH, Halfpenny W, Bu J, Brar M, Weinreb RN, Baxter SL Ophthalmology. Glaucoma 38959998 Ophthalmol Glaucoma 2024 Nov-Dec
Association Between Glucagon-Like Peptide-1 Receptor Agonists Exposure and Intraocular Pressure Change: GLP-1 Receptor Agonists and Intraocular Pressure Change. Hallaj S, Halfpenny W, Chuter BG, Weinreb RN, Baxter SL, Cui QN American journal of ophthalmology 39237049 Am J Ophthalmol 2025 Jan
Barriers to Extracting and Harmonizing Glaucoma Testing Data: Gaps, Shortcomings, and the Pursuit of FAIRness. Radgoudarzi N, Hallaj S, Boland MV, Stagg B, Wang SY, Xu B, Swaminathan SS, Brown EN, Chen A, Sun CQ, Amarasekera DC, Myers JS, Saifee M, Halfpenny W, Dirkes K, Zangwill L, Goetz KE, Hribar M, Baxter SL Ophthalmology science 39429240 Ophthalmol Sci 2024 Nov-Dec
Relationship Between Glaucoma and Chronic Stress Quantified by Allostatic Load Score in the All of Us Research Program. Yoo K, Lee C, Baxter SL, Xu BY American journal of ophthalmology 39271092 Am J Ophthalmol 2025 Jan
Glaucoma Detection and Feature Identification via GPT-4V Fundus Image Analysis. Jalili J, Jiravarnsirikul A, Bowd C, Chuter B, Belghith A, Goldbaum MH, Baxter SL, Weinreb RN, Zangwill LM, Christopher M Ophthalmology science 39877464 Ophthalmol Sci 2025 Mar-Apr
Variations in Using Diagnosis Codes for Defining Age-Related Macular Degeneration Cohorts. Kalaw FGP, Chen JS, Baxter SL Informatics (MDPI) 40012991 Informatics (MDPI) 2024 Jun
Review of glaucoma medication adherence monitoring in the digital health era. Erras A, Shahrvini B, Weinreb RN, Baxter SL The British journal of ophthalmology 33858837 Br J Ophthalmol 2023 Feb
Effects of Smoking on Optic Nerve Head Microvasculature Density in Glaucoma. Eslani M, Nishida T, Weinreb RN, Baxter S, Mahmoudinezhad G, Kamalipour A, Yarmohammadi A, Zangwill LM, Moghimi S Journal of glaucoma 35882030 J Glaucoma 2022 Sep 1
Medication Affordability and Self-Advocacy Among Racial/Ethnic Minorities in a Nationwide Cohort. Delavar A, Saseendrakumar BR, Weinreb RN, Baxter SL Journal of general internal medicine 35641727 J Gen Intern Med 2023 Jan
Trends and practices following the 2016 hydroxychloroquine screening guidelines. Kalaw FGP, Arnett J, Baxter SL, Walker E, Pedersen B, Borooah S Scientific reports 37730825 Sci Rep 2023 Sep 20
Evaluating the neuroprotective impact of senolytic drugs on human vision. El-Nimri NW, Moore SM, Zangwill LM, Proudfoot JA, Weinreb RN, Skowronska-Krawczyk D, Baxter SL Scientific reports 33303874 Sci Rep 2020 Dec 10
Healthcare Access and Utilization Among Glaucoma Patients in a Nationwide Cohort. Delavar A, Saseendrakumar BR, Weinreb RN, Baxter SL Journal of glaucoma 36223287 J Glaucoma 2023 Jan 1
Associations Between Thyroid Eye Disease and Glaucoma Among Those Enrolled in the National Institutes of Health All of Us Research Program. Delavar A, Radha Saseendrakumar B, Lee TC, Topilow NJ, Ting MA, Liu CY, Korn BS, Weinreb RN, Kikkawa DO, Baxter SL Ophthalmic plastic and reconstructive surgery 36394556 Ophthalmic Plast Reconstr Surg 2023 Jul-Aug 01
Data Sources for Evaluating Health Disparities in Ophthalmology: Where We Are and Where We Need to Go. Baxter SL, Nwanyanwu K, Legault G, Lee AY Ophthalmology 36058733 Ophthalmology 2022 Oct
Data Sciences and Visual Health Disparities. Legault G, Nwanyanwu K, Baxter SL Ophthalmology 36058740 Ophthalmology 2022 Oct
Diabetic Retinopathy and Dementia Association, Beyond Diabetes Severity. Lee CS, Krakauer C, Su YR, Walker RL, Blazes M, McCurry SM, Bowen JD, McCormick WC, Lee AY, Boyko EJ, O'Hare AM, Larson EB, Crane PK American journal of ophthalmology 36513155 Am J Ophthalmol 2023 May
Proactive Decision Support for Glaucoma Treatment: Predicting Surgical Interventions with Clinically Available Data. Christopher M, Gonzalez R, Huynh J, Walker E, Radha Saseendrakumar B, Bowd C, Belghith A, Goldbaum MH, Fazio MA, Girkin CA, De Moraes CG, Liebmann JM, Weinreb RN, Baxter SL, Zangwill LM Bioengineering (Basel, Switzerland) 38391627 Bioengineering (Basel) 2024 Jan 30
Evaluation of bias and gender/racial concordance based on sentiment analysis of narrative evaluations of clinical clerkships using natural language processing. Bhanvadia S, Radha Saseendrakumar B, Guo J, Spadafore M, Daniel M, Lander L, Baxter SL BMC medical education 38491461 BMC Med Educ 2024 Mar 15
Retinal tissue and microvasculature loss in COVID-19 infection. Kalaw FGP, Warter A, Cavichini M, Knight D, Li A, Deussen D, Galang C, Heinke A, Mendoza V, Borooah S, Baxter SL, Bartsch DU, Cheng L, Freeman WR Scientific reports 36991025 Sci Rep 2023 Mar 29
Usability and Clinician Acceptance of a Deep Learning-Based Clinical Decision Support Tool for Predicting Glaucomatous Visual Field Progression. Chen JS, Baxter SL, van den Brandt A, Lieu A, Camp AS, Do JL, Welsbie DS, Moghimi S, Christopher M, Weinreb RN, Zangwill LM Journal of glaucoma 36877820 J Glaucoma 2023 Mar 1
Gender Disparities in Depression, Stress, and Social Support Among Glaucoma Patients. Delavar A, Bu JJ, Radha Saseendrakumar B, Weinreb RN, Baxter SL Translational vision science & technology 38149963 Transl Vis Sci Technol 2023 Dec 1
Advancing Toward a Common Data Model in Ophthalmology: Gap Analysis of General Eye Examination Concepts to Standard Observational Medical Outcomes Partnership (OMOP) Concepts. Cai CX, Halfpenny W, Boland MV, Lehmann HP, Hribar M, Goetz KE, Baxter SL Ophthalmology science 38025162 Ophthalmol Sci 2023 Dec
Hepatopathology of flaviviruses. Bailey AL, Diamond MS Journal of hepatology 35981935 J Hepatol 2022 Dec
Effect of Interferon Gamma on Ebola Virus Infection of Primary Kupffer Cells and a Kupffer Cell Line. Aguilar-Briseño JA, Elliff JM, Patten JJ, Wilson LR, Davey RA, Bailey AL, Maury WJ Viruses 37896854 Viruses 2023 Oct 11
Development of a hydrogen peroxide-inactivated vaccine that protects against viscerotropic yellow fever in a non-human primate model. Amanna IJ, Thomas A, Engelmann F, Hammarlund E, Raué HP, Bailey AL, Poore EA, Quintel BK, Lewis AD, Axthelm MK, Johnson AL, Colgin LMA, Diamond MS, Messaoudi I, Slifka MK Cell reports. Medicine 39019010 Cell Rep Med 2024 Jul 16
Good microbes, bad genes? The dissemination of antimicrobial resistance in the human microbiome. Crits-Christoph A, Hallowell HA, Koutouvalis K, Suez J Gut microbes 35332832 Gut Microbes 2022 Jan-Dec
Interactions of Non-Nutritive Artificial Sweeteners with the Microbiome in Metabolic Syndrome. Harrington V, Lau L, Crits-Christoph A, Suez J Immunometabolism 35528135 Immunometabolism 2022
Clonal hematopoiesis associated with epigenetic aging and clinical outcomes. Nachun D, Lu AT, Bick AG, Natarajan P, Weinstock J, Szeto MD, Kathiresan S, Abecasis G, Taylor KD, Guo X, Tracy R, Durda P, Liu Y, Johnson C, Rich SS, Van Den Berg D, Laurie C, Blackwell T, Papanicolaou GJ, Correa A, Raffield LM, Johnson AD, Murabito J, Manson JE, Desai P, Kooperberg C, Assimes TL, Levy D, Rotter JI, Reiner AP, Whitsel EA, Wilson JG, Horvath S, Jaiswal S, NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium Aging cell 34050697 Aging Cell 2021 Jun
Germline risk of clonal haematopoiesis. Silver AJ, Bick AG, Savona MR Nature reviews. Genetics 33986496 Nat Rev Genet 2021 Sep
Increased prevalence of clonal hematopoiesis of indeterminate potential amongst people living with HIV. Bick AG, Popadin K, Thorball CW, Uddin MM, Zanni MV, Yu B, Cavassini M, Rauch A, Tarr P, Schmid P, Bernasconi E, Günthard HF, Libby P, Boerwinkle E, McLaren PJ, Ballantyne CM, Grinspoon S, Natarajan P, Fellay J, Swiss HIV Cohort Study Scientific reports 35022435 Sci Rep 2022 Jan 12
Age at Menopause, Leukocyte Telomere Length, and Coronary Artery Disease in Postmenopausal Women. Schuermans A, Nakao T, Uddin MM, Hornsby W, Ganesh S, Shadyab AH, Liu S, Haring B, Shufelt CL, Taub MA, Mathias RA, Kooperberg C, Reiner AP, Bick AG, Manson JE, Natarajan P, Honigberg MC Circulation research 37489536 Circ Res 2023 Aug 18
Clonal hematopoiesis is associated with protection from Alzheimer's disease. Bouzid H, Belk JA, Jan M, Qi Y, Sarnowski C, Wirth S, Ma L, Chrostek MR, Ahmad H, Nachun D, Yao W, NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium, Beiser A, Bick AG, Bis JC, Fornage M, Longstreth WT Jr, Lopez OL, Natarajan P, Psaty BM, Satizabal CL, Weinstock J, Larson EB, Crane PK, Keene CD, Seshadri S, Satpathy AT, Montine TJ, Jaiswal S Nature medicine 37322115 Nat Med 2023 Jul
Mosaic chromosomal alterations in blood across ancestries using whole-genome sequencing. Jakubek YA, Zhou Y, Stilp A, Bacon J, Wong JW, Ozcan Z, Arnett D, Barnes K, Bis JC, Boerwinkle E, Brody JA, Carson AP, Chasman DI, Chen J, Cho M, Conomos MP, Cox N, Doyle MF, Fornage M, Guo X, Kardia SLR, Lewis JP, Loos RJF, Ma X, Machiela MJ, Mack TM, Mathias RA, Mitchell BD, Mychaleckyj JC, North K, Pankratz N, Peyser PA, Preuss MH, Psaty B, Raffield LM, Vasan RS, Redline S, Rich SS, Rotter JI, Silverman EK, Smith JA, Smith AP, Taub M, Taylor KD, Yun J, Li Y, Desai P, Bick AG, Reiner AP, Scheet P, Auer PL Nature genetics 37904051 Nat Genet 2023 Nov
Cost-Effective and Scalable Clonal Hematopoiesis Assay Provides Insight into Clonal Dynamics. Mack T, Vlasschaert C, von Beck K, Silver AJ, Heimlich JB, Poisner H, Condon HR, Ulloa J, Sochacki AL, Spaulding TP, Kishtagari A, Bejan CA, Xu Y, Savona MR, Jones A, Bick AG The Journal of molecular diagnostics : JMD 38588769 J Mol Diagn 2024 Jul
Demonstrating paths for unlocking the value of cloud genomics through cross cohort analysis. Deflaux N, Selvaraj MS, Condon HR, Mayo K, Haidermota S, Basford MA, Lunt C, Philippakis AA, Roden DM, Denny JC, Musick A, Collins R, Allen N, Effingham M, Glazer D, Natarajan P, Bick AG Nature communications 37669985 Nat Commun 2023 Sep 5
Clonal Hematopoiesis of Indeterminate Potential and Kidney Function Decline in the General Population. Kestenbaum B, Bick AG, Vlasschaert C, Rauh MJ, Lanktree MB, Franceschini N, Shoemaker MB, Harris RC Jr, Psaty BM, Köttgen A, Natarajan P, Robinson-Cohen C American journal of kidney diseases : the official journal of the National Kidney Foundation 36241009 Am J Kidney Dis 2023 Mar
Determinants of mosaic chromosomal alteration fitness. Pershad Y, Mack T, Poisner H, Jakubek YA, Stilp AM, Mitchell BD, Lewis JP, Boerwinkle E, Loos RJ, Chami N, Wang Z, Barnes K, Pankratz N, Fornage M, Redline S, Psaty BM, Bis JC, Shojaie A, Silverman EK, Cho MH, Yun J, DeMeo D, Levy D, Johnson A, Mathias R, Taub M, Arnett D, North K, Raffield LM, Carson A, Doyle MF, Rich SS, Rotter JI, Guo X, Cox N, Roden DM, Franceschini N, Desai P, Reiner A, Auer PL, Scheet P, Jaiswal S, Weinstock JS, Bick AG medRxiv : the preprint server for health sciences 37905118 medRxiv 2023 Oct 21
Clonal Somatic Mutations in Chronic Lung Diseases Are Associated with Reduced Lung Function. Yun JH, Khan MAW, Ghosh A, Hobbs BD, Castaldi PJ, Hersh CP, Miller PG, Cool CD, Sciurba F, Barwick L, Limper AH, Flaherty K, Criner GJ, Brown K, Wise R, Martinez F, Silverman EK, DeMeo D, NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium, Cho MH, Bick AG American journal of respiratory and critical care medicine 37788444 Am J Respir Crit Care Med 2023 Dec 1
JAK2-mutant clonal hematopoiesis is associated with venous thromboembolism. Zon RL, Sekar A, Clapham K, Oren O, Niroula A, Bick AG, Gibson CJ, Griffin G, Uddin MM, Neuberg D, Natarajan P, Ebert BL Blood 39102652 Blood 2024 Nov 14
Long-term longitudinal analysis of 4,187 participants reveals insights into determinants of clonal hematopoiesis. Uddin MM, Saadatagah S, Niroula A, Yu B, Hornsby WE, Ganesh S, Lannery K, Schuermans A, Honigberg MC, Bick AG, Libby P, Ebert BL, Ballantyne CM, Natarajan P Nature communications 39251642 Nat Commun 2024 Sep 9
Variance quantitative trait loci reveal gene-gene interactions which alter blood traits. Pershad Y, Poisner H, Corty RW, Hellwege JN, Bick AG medRxiv : the preprint server for health sciences 39371150 medRxiv 2024 Sep 19
Association of Diet Quality With Prevalence of Clonal Hematopoiesis and Adverse Cardiovascular Events. Bhattacharya R, Zekavat SM, Uddin MM, Pirruccello J, Niroula A, Gibson C, Griffin GK, Libby P, Ebert BL, Bick A, Natarajan P JAMA cardiology 34106216 JAMA Cardiol 2021 Sep 1
Inherited myeloproliferative neoplasm risk affects haematopoietic stem cells. Bao EL, Nandakumar SK, Liao X, Bick AG, Karjalainen J, Tabaka M, Gan OI, Havulinna AS, Kiiskinen TTJ, Lareau CA, de Lapuente Portilla AL, Li B, Emdin C, Codd V, Nelson CP, Walker CJ, Churchhouse C, de la Chapelle A, Klein DE, Nilsson B, Wilson PWF, Cho K, Pyarajan S, Gaziano JM, Samani NJ, FinnGen, 23andMe Research Team, Regev A, Palotie A, Neale BM, Dick JE, Natarajan P, O'Donnell CJ, Daly MJ, Milyavsky M, Kathiresan S, Sankaran VG Nature 33057200 Nature 2020 Oct
Healthy Lifestyle and Clonal Hematopoiesis of Indeterminate Potential: Results From the Women's Health Initiative. Haring B, Reiner AP, Liu J, Tobias DK, Whitsel E, Berger JS, Desai P, Wassertheil-Smoller S, LaMonte MJ, Hayden KM, Bick AG, Natarajan P, Weinstock JS, Nguyen PK, Stefanick M, Simon MS, Eaton CB, Kooperberg C, Manson JE Journal of the American Heart Association 33619969 J Am Heart Assoc 2021 Feb
Aberrant activation of TCL1A promotes stem cell expansion in clonal haematopoiesis. Weinstock JS, Gopakumar J, Burugula BB, Uddin MM, Jahn N, Belk JA, Bouzid H, Daniel B, Miao Z, Ly N, Mack TM, Luna SE, Prothro KP, Mitchell SR, Laurie CA, Broome JG, Taylor KD, Guo X, Sinner MF, von Falkenhausen AS, Kääb S, Shuldiner AR, O'Connell JR, Lewis JP, Boerwinkle E, Barnes KC, Chami N, Kenny EE, Loos RJF, Fornage M, Hou L, Lloyd-Jones DM, Redline S, Cade BE, Psaty BM, Bis JC, Brody JA, Silverman EK, Yun JH, Qiao D, Palmer ND, Freedman BI, Bowden DW, Cho MH, DeMeo DL, Vasan RS, Yanek LR, Becker LC, Kardia SLR, Peyser PA, He J, Rienstra M, Van der Harst P, Kaplan R, Heckbert SR, Smith NL, Wiggins KL, Arnett DK, Irvin MR, Tiwari H, Cutler MJ, Knight S, Muhlestein JB, Correa A, Raffield LM, Gao Y, de Andrade M, Rotter JI, Rich SS, Tracy RP, Konkle BA, Johnsen JM, Wheeler MM, Smith JG, Melander O, Nilsson PM, Custer BS, Duggirala R, Curran JE, Blangero J, McGarvey S, Williams LK, Xiao S, Yang M, Gu CC, Chen YI, Lee WJ, Marcus GM, Kane JP, Pullinger CR, Shoemaker MB, Darbar D, Roden DM, Albert C, Kooperberg C, Zhou Y, Manson JE, Desai P, Johnson AD, Mathias RA, NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium, Blackwell TW, Abecasis GR, Smith AV, Kang HM, Satpathy AT, Natarajan P, Kitzman JO, Whitsel EA, Reiner AP, Bick AG, Jaiswal S Nature 37046083 Nature 2023 Apr
TP53-mediated clonal hematopoiesis confers increased risk for incident atherosclerotic disease. Zekavat SM, Viana-Huete V, Matesanz N, Jorshery SD, Zuriaga MA, Uddin MM, Trinder M, Paruchuri K, Zorita V, Ferrer-Pérez A, Amorós-Pérez M, Kunderfranco P, Carriero R, Greco CM, Aroca-Crevillen A, Hidalgo A, Damrauer SM, Ballantyne CM, Niroula A, Gibson CJ, Pirruccello J, Griffin G, Ebert BL, Libby P, Fuster V, Zhao H, Ghassemi M, Natarajan P, Bick AG, Fuster JJ, Klarin D Nature cardiovascular research 36949957 Nat Cardiovasc Res 2023 Jan 16
Proteomic profiling platforms head to head: Leveraging genetics and clinical traits to compare aptamer- and antibody-based methods. Katz DH, Robbins JM, Deng S, Tahir UA, Bick AG, Pampana A, Yu Z, Ngo D, Benson MD, Chen ZZ, Cruz DE, Shen D, Gao Y, Bouchard C, Sarzynski MA, Correa A, Natarajan P, Wilson JG, Gerszten RE Science advances 35984888 Sci Adv 2022 Aug 19
Clonal hematopoiesis of indeterminate potential, DNA methylation, and risk for coronary artery disease. Uddin MDM, Nguyen NQH, Yu B, Brody JA, Pampana A, Nakao T, Fornage M, Bressler J, Sotoodehnia N, Weinstock JS, Honigberg MC, Nachun D, Bhattacharya R, Griffin GK, Chander V, Gibbs RA, Rotter JI, Liu C, Baccarelli AA, Chasman DI, Whitsel EA, Kiel DP, Murabito JM, Boerwinkle E, Ebert BL, Jaiswal S, Floyd JS, Bick AG, Ballantyne CM, Psaty BM, Natarajan P, Conneely KN Nature communications 36097025 Nat Commun 2022 Sep 12
Whole Genome Sequence Analysis of the Plasma Proteome in Black Adults Provides Novel Insights Into Cardiovascular Disease. Katz DH, Tahir UA, Bick AG, Pampana A, Ngo D, Benson MD, Yu Z, Robbins JM, Chen ZZ, Cruz DE, Deng S, Farrell L, Sinha S, Schmaier AA, Shen D, Gao Y, Hall ME, Correa A, Tracy RP, Durda P, Taylor KD, Liu Y, Johnson WC, Guo X, Yao J, Ida Chen YD, Manichaikul AW, Jain D, Bouchard C, Sarzynski MA, Rich SS, Rotter JI, Wang TJ, Wilson JG, Natarajan P, Gerszten RE, National Heart, Lung, and Blood Institute TOPMed (Trans-Omics for Precision Medicine) Consortium† Circulation 34814699 Circulation 2022 Feb
Premature Menopause, Clonal Hematopoiesis, and Coronary Artery Disease in Postmenopausal Women. Honigberg MC, Zekavat SM, Niroula A, Griffin GK, Bick AG, Pirruccello JP, Nakao T, Whitsel EA, Farland LV, Laurie C, Kooperberg C, Manson JE, Gabriel S, Libby P, Reiner AP, Ebert BL, NHLBI Trans-Omics for Precision Medicine Program, Natarajan P Circulation 33161765 Circulation 2021 Feb 2
Clonal hematopoiesis and vascular disease. Amancherla K, Wells JA 4th, Bick AG Seminars in immunopathology 35122117 Semin Immunopathol 2022 May
Interleukin-6 Receptor Polymorphism Attenuates Clonal Hematopoiesis-Mediated Coronary Artery Disease Risk Among 451 180 Individuals in the UK Biobank. Vlasschaert C, Heimlich JB, Rauh MJ, Natarajan P, Bick AG Circulation 36689568 Circulation 2023 Jan 24
Long-term longitudinal analysis of 4,187 participants reveals new insights into determinants of incident clonal hematopoiesis. Uddin MM, Saadatagah S, Niroula A, Yu B, Hornsby W, Ganesh S, Lannery K, Shuermans A, Honigberg MC, Bick AG, Libby P, Ebert BL, Ballantyne CM, Natarajan P medRxiv : the preprint server for health sciences 37732181 medRxiv 2023 Sep 7
Genetic determinants and phenotypic consequences of blood T-cell proportions in 207,000 diverse individuals. Poisner H, Faucon A, Cox N, Bick AG Nature communications 39112476 Nat Commun 2024 Aug 7
Driver mutation zygosity is a critical factor in predicting clonal hematopoiesis transformation risk. Kishtagari A, Khan MAW, Li Y, Vlasschaert C, Marneni N, Silver AJ, von Beck K, Spaulding T, Stockton S, Snider C, Sochacki A, Dorand D, Mack TM, Ferrell PB Jr, Xu Y, Bejan CA, Savona MR, Bick AG Blood cancer journal 38225345 Blood Cancer J 2024 Jan 15
Increased Risk of Thoracic Aortic Aneurysms With JAK2 V617F. Nakao T, Yu Z, Vlasschaert C, Uddin MM, Lindsay ME, Ellinor PT, Ebert BL, Bick AG, Pirruccello JP, Natarajan P Journal of the American College of Cardiology 37225367 J Am Coll Cardiol 2023 May 30
Clonal Hematopoiesis of Indeterminate Potential Predicts Adverse Outcomes in Patients With Atherosclerotic Cardiovascular Disease. Gumuser ED, Schuermans A, Cho SMJ, Sporn ZA, Uddin MM, Paruchuri K, Nakao T, Yu Z, Haidermota S, Hornsby W, Weeks LD, Niroula A, Jaiswal S, Libby P, Ebert BL, Bick AG, Natarajan P, Honigberg MC Journal of the American College of Cardiology 37197843 J Am Coll Cardiol 2023 May 23
Genetic modification of inflammation- and clonal hematopoiesis-associated cardiovascular risk. Yu Z, Fidler TP, Ruan Y, Vlasschaert C, Nakao T, Uddin MM, Mack T, Niroula A, Heimlich JB, Zekavat SM, Gibson CJ, Griffin GK, Wang Y, Peloso GM, Heard-Costa N, Levy D, Vasan RS, Aguet F, Ardlie KG, Taylor KD, Rich SS, Rotter JI, Libby P, Jaiswal S, Ebert BL, Bick AG, Tall AR, Natarajan P The Journal of clinical investigation 37498674 J Clin Invest 2023 Sep 15
Hematopoietic mosaic chromosomal alterations and risk for infection among 767,891 individuals without blood cancer. Zekavat SM, Lin SH, Bick AG, Liu A, Paruchuri K, Uddin MM, Ye Y, Yu Z, Liu X, Kamatani Y, Pirruccello JP, Pampana A, Loh PR, Kohli P, McCarroll SA, Neale B, Engels EA, Brown DW, Smoller JW, Green R, Karlson EW, Lebo M, Ellinor PT, Weiss ST, Daly MJ, Biobank Japan Project, FinnGen Consortium, Terao C, Zhao H, Ebert BL, COVID-19 Host Genetics Initiative, Ganna A, Machiela MJ, Genovese G, Natarajan P medRxiv : the preprint server for health sciences 33236019 medRxiv 2020 Nov 16
Determinants of mosaic chromosomal alteration fitness. Pershad Y, Mack T, Poisner H, Jakubek YA, Stilp AM, Mitchell BD, Lewis JP, Boerwinkle E, Loos RJF, Chami N, Wang Z, Barnes K, Pankratz N, Fornage M, Redline S, Psaty BM, Bis JC, Shojaie A, Silverman EK, Cho MH, Yun JH, DeMeo D, Levy D, Johnson AD, Mathias RA, Taub MA, Arnett D, North KE, Raffield LM, Carson AP, Doyle MF, Rich SS, Rotter JI, Guo X, Cox NJ, Roden DM, Franceschini N, Desai P, Reiner AP, Auer PL, Scheet PA, Jaiswal S, Weinstock JS, Bick AG Nature communications 38714703 Nat Commun 2024 May 7
Clonal hematopoiesis in sickle cell disease. Liggett LA, Cato LD, Weinstock JS, Zhang Y, Nouraie SM, Gladwin MT, Garrett ME, Ashley-Koch A, Telen MJ, Custer B, Kelly S, Dinardo CL, Sabino EC, Loureiro P, Carneiro-Proietti AB, Maximo C, NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium, Reiner AP, Abecasis GR, Williams DA, Natarajan P, Bick AG, Sankaran VG The Journal of clinical investigation 34990411 J Clin Invest 2022 Feb 15
VEXAS-Defining UBA1 Somatic Variants in 245,368 Diverse Individuals in the NIH All Of Us Cohort. Corty RW, Brogan J, Byram K, Springer J, Grayson PC, Bick AG Arthritis & rheumatology (Hoboken, N.J.) 38225170 Arthritis Rheumatol 2024 Jun
Clonal Hematopoiesis Risk Score and All-Cause and Cardiovascular Mortality in Older Adults. Saadatagah S, Uddin MM, Weeks LD, Niroula A, Ru M, Takahashi K, Gondek L, Yu B, Bick AG, Ebert BL, Platz EA, Natarajan P, Ballantyne CM JAMA network open 38231513 JAMA Netw Open 2024 Jan 2
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Patient-specific comorbidities as prognostic variables for survival in myelofibrosis. Sochacki AL, Bejan CA, Zhao S, Patel A, Kishtagari A, Spaulding TP, Silver AJ, Stockton SS, Pugh K, Dorand RD, Bhatta M, Strayer N, Zhang S, Snider CA, Stricker T, Nazha A, Bick AG, Xu Y, Savona MR Blood advances 35420683 Blood Adv 2023 Mar 14
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Genetic Interleukin-6 Receptor Variant Is Not Associated With Rejection and Mortality After Heart Transplantation. Amancherla K, Schlendorf KH, Vlasschaert C, Lowery BD, Wells QS, See SB, Zorn E, Colombo PC, Reilly MP, Lindenfeld J, Uriel N, Shah RV, Freedman JE, Moslehi J, Bick AG, Clerkin K Journal of cardiac failure 38367904 J Card Fail 2024 Jun
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Reconstruction of private genomes through reference-based genotype imputation. Mosca MJ, Cho H Genome biology 38053191 Genome Biol 2023 Dec 6
Secure discovery of genetic relatives across large-scale and distributed genomic data sets. Hong MM, Froelicher D, Magner R, Popic V, Berger B, Cho H Genome research 39111815 Genome Res 2024 Oct 11
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Lipid Bicelle Micropatterning Using Chemical Lift-Off Lithography. Belling JN, Cheung KM, Jackman JA, Sut TN, Allen M, Park JH, Jonas SJ, Cho NJ, Weiss PS ACS applied materials & interfaces 32092250 ACS Appl Mater Interfaces 2020 Mar 18
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Self-Powered Programming of Fibroblasts into Neurons via a Scalable Magnetoelastic Generator Array. Libanori A, Soto J, Xu J, Song Y, Zarubova J, Tat T, Xiao X, Yue SZ, Jonas SJ, Li S, Chen J Advanced materials (Deerfield Beach, Fla.) 36468617 Adv Mater 2023 Feb
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Mixed-dimensional MXene-hydrogel heterostructures for electronic skin sensors with ultrabroad working range. Cai Y, Shen J, Yang CW, Wan Y, Tang HL, Aljarb AA, Chen C, Fu JH, Wei X, Huang KW, Han Y, Jonas SJ, Dong X, Tung V Science advances 33246950 Sci Adv 2020 Nov
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Evaluating a treatment selection approach for online single-session interventions for adolescent depression. Ahuvia IL, Mullarkey MC, Sung JY, Fox KR, Schleider JL Journal of child psychology and psychiatry, and allied disciplines 37183368 J Child Psychol Psychiatry 2023 Dec
Ecological-Systems Contributors to Internalizing Symptoms in a US Sample of Adolescents During the COVID-19 Pandemic. Thorpe D, Mirhashem R, Shen J, Roulston C, Fox K, Schleider J Journal of clinical child and adolescent psychology : the official journal for the Society of Clinical Child and Adolescent Psychology, American Psychological Association, Division 53 37616119 J Clin Child Adolesc Psychol 2023 Aug 24
Mixed-Methods Examination of Adolescent-Reported Barriers to Accessing Mental Health Services. Mora Ringle VA, Sung JY, Roulston CA, Schleider JL The Journal of adolescent health : official publication of the Society for Adolescent Medicine 37804301 J Adolesc Health 2024 Feb
Referring Adolescent Primary Care Patients to Single-Session Interventions for Anxiety and Depression: Protocol for a Feasibility Study. Eyllon M, Dalal M, Jans L, Sotomayor I, Peloquin G, Yon J, Fritz R, Schleider J JMIR research protocols 37556202 JMIR Res Protoc 2023 Aug 9
Beliefs about depression relate to active and avoidant coping in high-symptom adolescents. Pinder JB, Ahuvia IL, Chen S, Schleider JL Journal of affective disorders 37977300 J Affect Disord 2024 Feb 1
Debate: Where to next for universal school-based mental health interventions? Tensions in prevention - To build better school-based programming, we must start with what we know. Cohen KA, Bruns EJ, Schleider JL Child and adolescent mental health 40018868 Child Adolesc Ment Health 2025 Feb 28
Accessibility and Utility of an Electronic Self-Guided Safety Plan for Adolescents. Methi N, Weeks I, Hunt R, McGuire TC, Rubin A, Decker M, Schleider JL, Wang SB, Fox K Journal of clinical child and adolescent psychology : the official journal for the Society of Clinical Child and Adolescent Psychology, American Psychological Association, Division 53 39312731 J Clin Child Adolesc Psychol 2024 Nov-Dec
Developing, Deploying, and Evaluating Digital Mental Health Interventions in Spaces of Online Help- and Information-Seeking. Kruzan KP, Fitzsimmons-Craft EE, Dobias M, Schleider JL, Pratap A Procedia computer science 37063642 Procedia Comput Sci 2022
Acceptability and Utility of an Open-Access, Online Single-Session Intervention Platform for Adolescent Mental Health. Schleider JL, Dobias M, Sung J, Mumper E, Mullarkey MC JMIR mental health 32602846 JMIR Ment Health 2020 Jun 30
Loneliness in Gender-Diverse and Sexual Orientation-Diverse Adolescents: Measurement Invariance Analyses and Between-Group Comparisons. McDanal R, Schleider JL, Fox KR, Eaton NR Assessment 34963320 Assessment 2023 Apr
Single-Session Interventions Embedded Within Tumblr: Acceptability, Feasibility, and Utility Study. Dobias ML, Morris RR, Schleider JL JMIR formative research 35877163 JMIR Form Res 2022 Jul 25
Empowering Anxious Parents to Manage Child Avoidance Behaviors: Randomized Control Trial of a Single-Session Intervention for Parental Accommodation. Sung JY, Mumper E, Schleider JL JMIR mental health 34255718 JMIR Ment Health 2021 Jul 6
Brief School-Based Interventions Targeting Student Mental Health or Well-Being: A Systematic Review and Meta-Analysis. Cohen KA, Ito S, Ahuvia IL, Yang Y, Zhang Y, Renshaw TL, Larson M, Cook C, Hill S, Liao J, Rapoport A, Smock A, Yang M, Schleider JL Clinical child and family psychology review 38884838 Clin Child Fam Psychol Rev 2024 Sep
The impact of COVID-19 on U.S. adolescents: loss of basic needs and engagement in health risk behaviors. Shroff A, Fassler J, Fox KR, Schleider JL Current psychology (New Brunswick, N.J.) 35095242 Curr Psychol 2022 Jan 22
Web-Based Single Session Intervention for Perceived Control Over Anxiety During COVID-19: Randomized Controlled Trial. Mullarkey M, Dobias M, Sung J, Ahuvia I, Shumake J, Beevers C, Schleider J JMIR mental health 35230962 JMIR Ment Health 2022 Apr 12
A randomized trial of online single-session interventions for adolescent depression during COVID-19. Schleider JL, Mullarkey MC, Fox KR, Dobias ML, Shroff A, Hart EA, Roulston CA Nature human behaviour 34887544 Nat Hum Behav 2022 Feb
When is Psychotherapy Brief? Considering Sociodemographic Factors, Problem Complexity, and Problem Type in U.S. Adolescents. Abel MR, Bianco A, Gilbert R, Schleider JL Journal of clinical child and adolescent psychology : the official journal for the Society of Clinical Child and Adolescent Psychology, American Psychological Association, Division 53 32356677 J Clin Child Adolesc Psychol 2022 Sep-Oct
The fundamental need for lived experience perspectives in developing and evaluating psychotherapies. Schleider JL Journal of consulting and clinical psychology 36795434 J Consult Clin Psychol 2023 Mar
Realizing the untapped promise of single-session interventions for eating disorders. Schleider JL, Smith AC, Ahuvia I The International journal of eating disorders 36815724 Int J Eat Disord 2023 May
Serving the Underserved? Uptake, Effectiveness, and Acceptability of Digital SSIs for Rural American Adolescents. Szkody E, Chang YW, Schleider JL Journal of clinical child and adolescent psychology : the official journal for the Society of Clinical Child and Adolescent Psychology, American Psychological Association, Division 53 37931065 J Clin Child Adolesc Psychol 2023 Nov 6
Technology Matters: Online, self-help single session interventions could expand current provision, improving early access to help for young people with depression symptoms, including minority groups. Loades ME, Schleider JL Child and adolescent mental health 37415054 Child Adolesc Ment Health 2023 Nov
Timing matters in (mis)identifying moderators and mediators of digital interventions for eating disorders: Commentary on McClure et al. (2023). Schleider JL, Smith AC, Graham AK The International journal of eating disorders 38450821 Int J Eat Disord 2024 May
Project Body Neutrality: Piloting a digital single-session intervention for adolescent body image and depression. Smith AC, Ahuvia I, Ito S, Schleider JL The International journal of eating disorders 37129116 Int J Eat Disord 2023 Aug
Not niche: eating disorders as an example in the dangers of overspecialisation. Haynos AF, Egbert AH, Fitzsimmons-Craft EE, Levinson CA, Schleider JL The British journal of psychiatry : the journal of mental science 38097370 Br J Psychiatry 2024 Mar
Sexual Health Education Experiences and Recommendations from the Perspective of LGBTQ+ Youth. Hobaica S, Szkody E, Sotomayor I, Liao J, Schleider JL Journal of sex research 38880957 J Sex Res 2024 Jun 16
Polypill for Population-Level Primary Cardiovascular Prevention in Underserved Populations-A Social Epidemiology Counterargument. Cainzos-Achirica M, Bilal U The American journal of medicine 32442515 Am J Med 2020 Oct
Estimating and mapping cigarette butt littering in urban environments: A GIS approach. Valiente R, Escobar F, Pearce J, Bilal U, Franco M, Sureda X Environmental research 32004828 Environ Res 2020 Apr
Socioeconomic deprivation and changes in the retail food environment of Mexico from 2010 to 2020. Ramírez-Toscano Y, Pérez-Ferrer C, Bilal U, Auchincloss AH, Barrientos-Gutierrez T Health & place 35932595 Health Place 2022 Sep
Reduction in socioeconomic inequalities in self-reported mental health conditions with increasing greenspace exposure. Kondo MC, McIntire RK, Bilal U, Schinasi LH Health & place 36193582 Health Place 2022 Nov
Heterogeneity in Spatial Inequities in COVID-19 Vaccination Across 16 Large US Cities. Bilal U, Mullachery PH, Schnake-Mahl A, Rollins H, McCulley E, Kolker J, Barber S, Diez Roux AV American journal of epidemiology 35452081 Am J Epidemiol 2022 Aug 22
Inequities in spatial accessibility to COVID-19 testing in 30 large US cities. Mullachery PH, Li R, Melly S, Kolker J, Barber S, Diez Roux AV, Bilal U Social science & medicine (1982) 36049353 Soc Sci Med 2022 Oct
COVID-19 Outcomes Among the Hispanic Population of 27 Large US Cities, 2020-2021. De Ramos IP, Lazo M, Schnake-Mahl A, Li R, Martinez-Donate AP, Roux AVD, Bilal U American journal of public health 35588187 Am J Public Health 2022 Jul
Racial/ethnic and neighbourhood social vulnerability disparities in COVID-19 testing positivity, hospitalization, and in-hospital mortality in a large hospital system in Pennsylvania: A prospective study of electronic health records. Bilal U, Jemmott JB, Schnake-Mahl A, Murphy K, Momplaisir F Lancet regional health. Americas 35262038 Lancet Reg Health Am 2022 Jun
The effect of population mobility on COVID-19 incidence in 314 Latin American cities: a longitudinal ecological study with mobile phone location data. Kephart JL, Delclòs-Alió X, Rodríguez DA, Sarmiento OL, Barrientos-Gutiérrez T, Ramirez-Zea M, Quistberg DA, Bilal U, Diez Roux AV The Lancet. Digital health 34456179 Lancet Digit Health 2021 Nov
Potential impacts of policies to reduce purchasing of ultra-processed foods in Mexico at different stages of the social transition: an agent-based modelling approach. Langellier BA, Stankov I, Hammond RA, Bilal U, Auchincloss AH, Barrientos-Gutierrez T, Cardoso LO, Diez Roux AV Public health nutrition 34895382 Public Health Nutr 2022 Jun
Understanding Immigration as a Social Determinant of Health: Cardiovascular Disease in Hispanics/Latinos and South Asians in the United States. Guadamuz JS, Kapoor K, Lazo M, Eleazar A, Yahya T, Kanaya AM, Cainzos-Achirica M, Bilal U Current atherosclerosis reports 33772650 Curr Atheroscler Rep 2021 Mar 27
Urban social determinants of non-communicable diseases risk factors in Argentina. Tumas N, Rodríguez López S, Bilal U, Ortigoza AF, Diez Roux AV Health & place 34210611 Health Place 2022 Sep
A COMPARATIVE CASE STUDY OF WALKING ENVIRONMENT IN MADRID AND PHILADELPHIA USING MULTIPLE SAMPLING METHODS AND STREET VIRTUAL AUDITS. Gullón P, Bilal U, Sánchez P, Díez J, Lovasi GS, Franco M Cities & health 33718600 Cities Health 2020
Spatial Inequities in COVID-19 Testing, Positivity, Confirmed Cases, and Mortality in 3 U.S. Cities : An Ecological Study. Bilal U, Tabb LP, Barber S, Diez Roux AV Annals of internal medicine 33780289 Ann Intern Med 2021 Jul
[Epidemiologic evidence on the role of hospitality venues in the transmission of COVID-19: A rapid review of the literature]. Bilal U, Gullón P, Padilla-Bernáldez J Gaceta sanitaria 33933322 Gac Sanit 2022 Mar-Apr
Urban landscape and street-design factors associated with road-traffic mortality in Latin America between 2010 and 2016 (SALURBAL): an ecological study. Quistberg DA, Hessel P, Rodriguez DA, Sarmiento OL, Bilal U, Caiaffa WT, Miranda JJ, de Pina MF, Hernández-Vásquez A, Diez Roux AV The Lancet. Planetary health 35150622 Lancet Planet Health 2022 Feb
Racial/Ethnic Disparities in Hepatocellular Carcinoma: The Role of Neighborhood Socioeconomic Deprivation. Lazo M, Martinez-Folgar K, Bilal U Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 35775232 Cancer Epidemiol Biomarkers Prev 2022 Jul 1
Changes in Racial/Ethnic Disparities in Opioid-Related Outcomes in Urban Areas during the COVID-19 Pandemic: A Rapid Review of the Literature. Moran KM, Mullachery PH, Lankenau S, Bilal U International journal of environmental research and public health 35954640 Int J Environ Res Public Health 2022 Jul 29
Excess Mortality During the COVID-19 Pandemic in Guatemala. Martinez-Folgar K, Alburez-Gutierrez D, Paniagua-Avila A, Ramirez-Zea M, Bilal U American journal of public health 34554821 Am J Public Health 2021 Oct
Association Between Household Deprivation and Living in Informal Settlements and Incidence of Diarrhea in Children Under 5 in Eleven Latin American Cities. Alpaugh V, Ortigoza A, Braverman Bronstein A, Pérez-Ferrer C, Wagner-Gutierrez N, Pacifico N, Ezeh A, Caiaffa WT, Lovasi G, Bilal U Journal of urban health : bulletin of the New York Academy of Medicine 38652338 J Urban Health 2024 Jun
Ambient nitrogen dioxide in 47 187 neighbourhoods across 326 cities in eight Latin American countries: population exposures and associations with urban features. Kephart JL, Gouveia N, Rodríguez DA, Indvik K, Alfaro T, Texcalac-Sangrador JL, Miranda JJ, Bilal U, Diez Roux AV The Lancet. Planetary health 38056968 Lancet Planet Health 2023 Dec
A scaling investigation of urban form features in Latin America cities. Paiva ASS, Santos GF, Castro CP, Rodriguez DA, Bilal U, Sousa Filho JF, Freitas A, Montes F, Dronova I, Barreto ML, Andrade RFS PloS one 38109440 PLoS One 2023
Higher COVID-19 Vaccination And Narrower Disparities In US Cities With Paid Sick Leave Compared To Those Without. Schnake-Mahl AS, O'Leary G, Mullachery PH, Skinner A, Kolker J, Diez Roux AV, Raifman JR, Bilal U Health affairs (Project Hope) 36343316 Health Aff (Millwood) 2022 Nov
COVID-19, Ambient Air Pollution, and Environmental Health Inequities in Latin American Cities. Kephart JL, Avila-Palencia I, Bilal U, Gouveia N, Caiaffa WT, Diez Roux AV Journal of urban health : bulletin of the New York Academy of Medicine 33471282 J Urban Health 2021 Jun
Schnake-Mahl and Bilal Respond to "Structural Racism and COVID-19 Mortality in the US". Schnake-Mahl AS, Bilal U American journal of epidemiology 33710318 Am J Epidemiol 2021 Aug 1
Does a physical activity supportive environment ameliorate or exacerbate socioeconomic inequities in incident coronary heart disease? Gullon P, Bilal U, Hirsch JA, Rundle AG, Judd S, Safford MM, Lovasi GS Journal of epidemiology and community health 33318134 J Epidemiol Community Health 2021 Jul
Adaptation and Evaluation of the Nutrition Environment Measures Survey in Stores to Assess Mediterranean Food Environments (NEMS-S-MED). Martínez-García A, Díez J, Fernández-Escobar C, Trescastro-López EM, Pereyra-Zamora P, Ariza C, Bilal U, Franco M International journal of environmental research and public health 32992984 Int J Environ Res Public Health 2020 Sep 25
Social cross-over in cardiovascular disease: context matters. Mullachery PH, Bilal U Heart (British Cardiac Society) 33568428 Heart 2021 May
Considering multiple governance levels in epidemiologic analysis of public policies. Schnake-Mahl AS, Jahn JL, Purtle J, Bilal U Social science & medicine (1982) 36274459 Soc Sci Med 2022 Dec
Exercise facility availability and incidence of type 2 diabetes and complications in Spain: A population-based retrospective cohort 2015-2018. Cereijo L, Gullón P, Del Cura I, Valadés D, Bilal U, Franco M, Badland H Health & place 37087897 Health Place 2023 May
Geospatial Data Aggregation Methods for Novel Geographies: Validating Congressional District Life Expectancy Estimates. Schnake-Mahl A, Anfuso G, Hernandez SM, Bilal U Epidemiology (Cambridge, Mass.) 39329432 Epidemiology 2025 Jan 1
Health and Health-Related Resources in Newly Designated Federally Qualified Opportunity Zones: United States, 2012-2016. Hirsch JA, Zhao Y, Bilal U, Neckerman KM, Michael YL American journal of public health 31944851 Am J Public Health 2020 Mar
Socioeconomic Inequalities in the Retail Food Environment around Schools in a Southern European Context. Díez J, Cebrecos A, Rapela A, Borrell LN, Bilal U, Franco M Nutrients 31277242 Nutrients 2019 Jul 3
Inequalities in life expectancy in six large Latin American cities from the SALURBAL study: an ecological analysis. Bilal U, Alazraqui M, Caiaffa WT, Lopez-Olmedo N, Martinez-Folgar K, Miranda JJ, Rodriguez DA, Vives A, Diez-Roux AV The Lancet. Planetary health 31836433 Lancet Planet Health 2019 Dec
Mapping the visibility of smokers across a large capital city. Valiente R, Escobar F, Pearce J, Bilal U, Franco M, Sureda X Environmental research 31706598 Environ Res 2020 Jan
Polypill for Cardiovascular Disease Prevention in an Underserved Population. Bilal U, Cainzos-Achirica M The New England journal of medicine 31875510 N Engl J Med 2020 Jan 2
Access to and availability of exercise facilities in Madrid: an equity perspective. Cereijo L, Gullón P, Cebrecos A, Bilal U, Santacruz JA, Badland H, Franco M International journal of health geographics 31266518 Int J Health Geogr 2019 Jul 2
Economic Insecurity and Deaths of Despair in US Counties. Knapp EA, Bilal U, Dean LT, Lazo M, Celentano DD American journal of epidemiology 31172197 Am J Epidemiol 2019 Dec 31
Mortality amenable to healthcare in Latin American cities: a cross-sectional study examining between-country variation in amenable mortality and the role of urban metrics. Mullachery PH, Rodriguez DA, Miranda JJ, López-Olmedo N, Martinez-Folgar K, Barreto ML, Diez Roux AV, Bilal U International journal of epidemiology 34339492 Int J Epidemiol 2022 Feb 18
COVID-19 and the worsening of health inequities in Santiago, Chile. Bilal U, Alfaro T, Vives A International journal of epidemiology 33537771 Int J Epidemiol 2021 Jul 9
Evaluation of the national sobriety checkpoints program in Mexico: a difference-in-difference approach with variation in timing of program adoption. Mullachery PH, Quistberg DA, Lazo M, Indvik K, Perez-Ferrer C, López-Olmedo N, Colchero MA, Bilal U Injury epidemiology 36411475 Inj Epidemiol 2022 Nov 21
Longitudinal changes in the retail food environment in Mexico and their association with diabetes. Pérez-Ferrer C, Auchincloss AH, Barrientos-Gutierrez T, Colchero MA, de Oliveira Cardoso L, Carvalho de Menezes M, Bilal U Health & place 33039800 Health Place 2020 Nov
Excess Mortality during the COVID-19 Pandemic in Cities of Chile: Magnitude, Inequalities, and Urban Determinants. Alfaro T, Martinez-Folgar K, Vives A, Bilal U Journal of urban health : bulletin of the New York Academy of Medicine 35688966 J Urban Health 2022 Oct
Inequalities by Income in the Prevalence of Cardiovascular Disease and Its Risk Factors in the Adult Population of Catalonia. Mullachery PH, Vela E, Cleries M, Comin-Colet J, Nasir K, Diez Roux AV, Cainzos-Achirica M, Mauri J, Bilal U Journal of the American Heart Association 36000437 J Am Heart Assoc 2022 Sep 6
Disaggregating disparities: A case study of heterogenous COVID-19 disparities across waves, geographies, social vulnerability, and political lean in Louisiana. Schnake-Mahl A, Bilal U Preventive medicine reports 35637894 Prev Med Rep 2022 Aug
Scaling of mortality in 742 metropolitan areas of the Americas. Bilal U, de Castro CP, Alfaro T, Barrientos-Gutierrez T, Barreto ML, Leveau CM, Martinez-Folgar K, Miranda JJ, Montes F, Mullachery P, Pina MF, Rodriguez DA, Dos Santos GF, Andrade RFS, Diez Roux AV Science advances 34878846 Sci Adv 2021 Dec 10
Urban scaling of opioid analgesic sales in the United States. Mullachery PH, Bilal U PloS one 34637453 PLoS One 2021
Monitoring life expectancy levels during the COVID-19 pandemic: Example of the unequal impact of the first wave on Spanish regions. Trias-Llimós S, Riffe T, Bilal U PloS one 33152009 PLoS One 2020
The Impact of Keeping Indoor Dining Closed on COVID-19 Rates Among Large US Cities: A Quasi-Experimental Design. Schnake-Mahl AS, O'Leary G, Mullachery PH, Vaidya V, Connor G, Rollins H, Kolker J, Diez Roux AV, Bilal U Epidemiology (Cambridge, Mass.) 34799474 Epidemiology 2022 Mar 1
Urban Scaling of Health Outcomes: a Scoping Review. McCulley EM, Mullachery PH, Ortigoza AF, Rodríguez DA, Diez Roux AV, Bilal U Journal of urban health : bulletin of the New York Academy of Medicine 35513600 J Urban Health 2022 Jun
Burden of cardiovascular risk factors and disease in five Asian groups in Catalonia: a disaggregated, population-based analysis of 121 000 first-generation Asian immigrants. Satish P, Vela E, Bilal U, Cleries M, Kanaya AM, Kandula N, Virani SS, Islam N, Valero-Elizondo J, Yahya T, Comin-Colet J, Nasir K, Mauri J, Cainzos-Achirica M European journal of preventive cardiology 33969397 Eur J Prev Cardiol 2022 May 6
Linking historical discriminatory housing patterns to the contemporary food environment in Baltimore. Sadler RC, Bilal U, Furr-Holden CD Spatial and spatio-temporal epidemiology 33509435 Spat Spatiotemporal Epidemiol 2021 Feb
Invited Commentary: Some Social Epidemiologic Lessons From the COVID-19 Pandemic. Schnake-Mahl AS, Bilal U American journal of epidemiology 36617304 Am J Epidemiol 2023 Jun 2
Health and Environmental Co-Benefits of City Urban Form in Latin America: An Ecological Study. Avila-Palencia I, Sánchez BN, Rodríguez DA, Perez-Ferrer C, Miranda JJ, Gouveia N, Bilal U, Useche AF, Wilches-Mogollon MA, Moore K, Sarmiento OL, Diez Roux AV Sustainability 36926000 Sustainability 2022 Nov 8
Variability and social patterning of cancer mortality in 343 Latin American cities: an ecological study. Alfaro T, Martinez-Folgar K, Stern D, Wilches-Mogollon MA, Muñoz MP, Quick H, Alazraqui M, Ramirez-Zea M, Miranda JJ, Lazo M, Caiaffa WT, Roux AVD, Bilal U The Lancet. Global health 39890227 Lancet Glob Health 2025 Feb
Understanding the obesity dynamics by socioeconomic status in Colombian and Mexican cities using a system dynamics model. Meisel JD, Esguerra V, Pérez Ferrer C, Stankov I, Montes F, Tumas N, Bilal U, Valdivia JA, Diez Roux AV, Sarmiento OL Heliyon 39605831 Heliyon 2024 Nov 30
Spatial Heterogeneity in Fatal Overdose Rate Trends in Mexican Cities: 2005-2021. Henson RM, Mullachery PH, Sánchez-Pájaro A, Cruz-Cruz C, Bilal U, Langellier B, Barrientos-Gutiérrez T American journal of public health 38723222 Am J Public Health 2024 Jul
Spatial Inequities in Life Expectancy in Small Areas of Buenos Aires, Argentina 2015-2017. Trotta A, Bilal U, Acharya B, Quick H, Moore K, Perner SM, Alazraqui M, Diez Roux A Journal of urban health : bulletin of the New York Academy of Medicine 37225944 J Urban Health 2023 Jun
Does Urban Greenspace Reduce Mortality Inequalities Based on Poverty, Race, or Both in Philadelphia, PA? Schinasi LH, Kondo MC, Edwards J, Clougherty JE, De Roos AJ, Bilal U Journal of urban health : bulletin of the New York Academy of Medicine 37563520 J Urban Health 2023 Aug
Does geographic availability of alcohol influence drinking in adolescents? A systematic review of literature associations. Martín-Turrero I, Valiente R, Pastor A, Bilal U, Sureda X Health & place 39368139 Health Place 2024 Nov
Variation in youth and young adult homicide rates and their association with city characteristics in Latin America: the SALURBAL study. de Lima Friche AA, Silva UM, Bilal U, Sarmiento OL, de Salles Dias MA, Prado-Galbarro FJ, Briceño-León R, Alazraqui M, Diez-Roux AV, Caiaffa WT Lancet regional health. Americas 36970493 Lancet Reg Health Am 2023 Apr
Ambient nitrogen dioxide in 47,187 neighborhoods across 326 cities in eight Latin American countries: population exposures and associations with urban features. Kephart JL, Gouveia N, Rodriguez DA, Indvik K, Alfaro T, Texcalac JL, Miranda JJ, Bilal U, Roux AVD medRxiv : the preprint server for health sciences 37205591 medRxiv 2023 May 2
Social inequities in cardiovascular risk factors in women and men by autonomous regions in Spain. Gullón P, Díez J, Cainzos-Achirica M, Franco M, Bilal U Gaceta sanitaria 32674863 Gac Sanit 2021 Jul-Aug
Gender inequality, women's empowerment, and adolescent birth rates in 363 Latin American cities. Braverman-Bronstein A, Ortigoza AF, Vidaña-Pérez D, Barrientos-Gutiérrez T, Baldovino-Chiquillo L, Bilal U, Friche AAL, Diez-Canseco F, Maslowsky J, Vives V A, Diez Roux AV Social science & medicine (1982) 36446141 Soc Sci Med 2023 Jan
Heterogeneity in Disparities in Life Expectancy Across US Metropolitan Areas. Schnake-Mahl AS, Mullachery PH, Purtle J, Li R, Diez Roux AV, Bilal U Epidemiology (Cambridge, Mass.) 36220582 Epidemiology 2022 Nov 1
Urban scaling of health outcomes: a protocol for a scoping review. McCulley EM, Mullachery P, Rodriguez D, Diez Roux AV, Bilal U BMJ open 31767587 BMJ Open 2019 Nov 24
Complex Systems Approaches to Diet: A Systematic Review. Langellier BA, Bilal U, Montes F, Meisel JD, Cardoso LO, Hammond RA American journal of preventive medicine 31326011 Am J Prev Med 2019 Aug
Area-Level Social Vulnerability and Severe COVID-19: A Case-Control Study Using Electronic Health Records from Multiple Health Systems in the Southeastern Pennsylvania Region. Mullachery PH, Bilal U, Li R, McClure LA Journal of urban health : bulletin of the New York Academy of Medicine 38740710 J Urban Health 2024 Aug
Exploring inequalities in life expectancy and lifespan variation by race/ethnicity and urbanicity in the United States: 1990 to 2019. De Ramos IP, Auchincloss AH, Bilal U SSM - population health 36148325 SSM Popul Health 2022 Sep
Built environment profiles for Latin American urban settings: The SALURBAL study. Sarmiento OL, Useche AF, Rodriguez DA, Dronova I, Guaje O, Montes F, Stankov I, Wilches MA, Bilal U, Wang X, Guzmán LA, Peña F, Quistberg DA, Guerra-Gomez JA, Diez Roux AV PloS one 34699532 PLoS One 2021
Socioeconomic Disparities in Hypertension by Levels of Green Space Availability: A Cross-Sectional Study in Philadelphia, PA. Koh C, Kondo MC, Rollins H, Bilal U International journal of environmental research and public health 35206224 Int J Environ Res Public Health 2022 Feb 11
The urban built environment and adult BMI, obesity, and diabetes in Latin American cities. Anza-Ramirez C, Lazo M, Zafra-Tanaka JH, Avila-Palencia I, Bilal U, Hernández-Vásquez A, Knoll C, Lopez-Olmedo N, Mazariegos M, Moore K, Rodriguez DA, Sarmiento OL, Stern D, Tumas N, Miranda JJ Nature communications 36581636 Nat Commun 2022 Dec 29
Social inequalities in mobility during and following the COVID-19 associated lockdown of the Madrid metropolitan area in Spain. Glodeanu A, Gullón P, Bilal U Health & place 34022543 Health Place 2021 Jul
Accessibility and availability of alcohol outlets around schools: An ecological study in the city of Madrid, Spain, according to socioeconomic area-level. Martín-Turrero I, Valiente R, Molina-de la Fuente I, Bilal U, Lazo M, Sureda X Environmental research 34774513 Environ Res 2022 Mar
Variation in Non-external and External Causes of Death in Peru in Relation to the COVID-19 Lockdown. Calderon-Anyosa RJC, Bilal U, Kaufman JS The Yale journal of biology and medicine 33795980 Yale J Biol Med 2021 Mar
Life expectancy and mortality in 363 cities of Latin America. Bilal U, Hessel P, Perez-Ferrer C, Michael YL, Alfaro T, Tenorio-Mucha J, Friche AAL, Pina MF, Vives A, Quick H, Alazraqui M, Rodriguez DA, Miranda JJ, Diez-Roux AV, SALURBAL group Nature medicine 33495602 Nat Med 2021 Mar
How education and racial segregation intersect in neighborhoods with persistently low COVID-19 vaccination rates in Philadelphia. Rich JA, Miech EJ, Bilal U, Corbin TJ BMC public health 35614426 BMC Public Health 2022 May 25
Validation of a neighborhood-level COVID Local Risk Index in 47 large U.S. cities. Spoer BR, McCulley E, Lampe TM, Hsieh PY, Chen A, Ofrane R, Rollins H, Thorpe LE, Bilal U, Gourevitch MN Health & place 35623163 Health Place 2022 Jul
Impact of the COVID-19 pandemic on life expectancy in Madrid (Spain). Trias-Llimós S, Bilal U Journal of public health (Oxford, England) 32542350 J Public Health (Oxf) 2020 Aug 18
Assessing the Retail Food Environment in Madrid: An Evaluation of Administrative Data against Ground Truthing. Díez J, Cebrecos A, Galán I, Pérez-Freixo H, Franco M, Bilal U International journal of environmental research and public health 31546670 Int J Environ Res Public Health 2019 Sep 21
Indoor Dining and In-Person Learning: A Comparison of 30 US Cities. O'Leary G, Schnake-Mahl AS, Vaidya V, Bilal U, Kolker J International journal of environmental research and public health 34682712 Int J Environ Res Public Health 2021 Oct 19
What Has It Meant for Me to Be an Epidemiologist in 2020? Bilal U Epidemiology (Cambridge, Mass.) 33122555 Epidemiology 2021 Jan
Tracking COVID-19 Inequities Across Jurisdictions Represented in the Big Cities Health Coalition (BCHC): The COVID-19 Health Inequities in BCHC Cities Dashboard. Bilal U, McCulley E, Li R, Rollins H, Schnake-Mahl A, Mullachery PH, Vaidya V, Koh C, Dureja K, Sharaf A, Furukawa A, Juliano C, Barber S, Kolker J, Diez Roux AV American journal of public health 35420892 Am J Public Health 2022 Jun
Urban scaling of opioid overdose deaths in the USA: a cross-sectional study in three periods between 2005 and 2017. Mullachery PH, Lankenau S, Diez Roux AV, Li R, Henson RM, Bilal U BMJ open 35241464 BMJ Open 2022 Mar 3
How Can We Measure Alcohol Outlet Density Around Schools? A Comparison Between Two Buffer-Based Methods. Martín-Turrero I, Sureda X, Escobar F, Bilal U, Berasaluce M, Valiente R Journal of urban health : bulletin of the New York Academy of Medicine 37351726 J Urban Health 2023 Jun
Measuring variation in infant mortality and deaths of despair by US congressional district in Pennsylvania: a methodological case study. Schnake-Mahl A, Anfuso G, Goldstein ND, Purtle J, Eberth JM, Ortigoza A, Bilal U American journal of epidemiology 38412272 Am J Epidemiol 2024 Jul 8
Social disparities in flood exposure and associations with the urban environment in 44,698 neighborhoods in 276 cities in eight Latin American countries. Kephart JL, Bilal U, Gouveia N, Sarmiento OL, Shingara E, Moreno KR, Bakhtsiyarava M, Rodriguez JP, Ayala S, Carrasco-Escobar G, Diez Roux AV, SALURBAL-Climate Project medRxiv : the preprint server for health sciences 39006415 medRxiv 2024 Jul 3
Impact of an enhanced sobriety checkpoints programme and publicity campaign on motor vehicle collisions, injuries and deaths in Leon, MX: a synthetic control study. Quistberg DA, Perez-Ferrer C, Bilal U, Rodriguez Hernandez JL, Ramírez-Toscano Y, Cardenas Cardenas LM, Junquera-Badilla I, Yamada G, Barrientos-Gutierrez T, Diez Roux AV Injury prevention : journal of the International Society for Child and Adolescent Injury Prevention 39038940 Inj Prev 2024 Jul 22
Wide range of phenotypic severity in individuals with late truncations unique to the predominant CDKL5 transcript in the brain. Keehan L, Haviland I, Gofin Y, Swanson LC, El Achkar CM, Schreiber J, VanNoy GE, O'Heir E, O'Donnell-Luria A, Lewis RA, Magoulas P, Tran A, Azamian MS, Chao HT, Pham L, Samaco RC, Elsea S, Thorpe E, Kesari A, Perry D, Lee B, Lalani SR, Rosenfeld JA, Olson HE, Burrage LC, Undiagnosed Diseases Network American journal of medical genetics. Part A 35934918 Am J Med Genet A 2022 Dec
PRUNE1 c.933G>A synonymous variant induces exon 7 skipping, disrupts the DHHA2 domain, and leads to an atypical NMIHBA syndrome presentation: Case report and review of the literature. Magyar CL, Murdock DR, Burrage LC, Dai H, Lalani SR, Lewis RA, Lin Y, Astudillo MF, Rosenfeld JA, Tran AA, Gibson JB, Undiagnosed Diseases Network, Bacino CA, Lee BH, Chao HT American journal of medical genetics. Part A 35194938 Am J Med Genet A 2022 Jun
An Integrated Phenotypic and Genotypic Approach Reveals a High-Risk Subtype Association for EBF3 Missense Variants Affecting the Zinc Finger Domain. Deisseroth CA, Lerma VC, Magyar CL, Pfliger JM, Nayak A, Bliss ND, LeMaire AW, Narayanan V, Balak C, Zanni G, Valente EM, Bertini E, Benke PJ, Wangler MF, Chao HT Annals of neurology 35340043 Ann Neurol 2022 Jul
De novo EIF2AK1 and EIF2AK2 Variants Are Associated with Developmental Delay, Leukoencephalopathy, and Neurologic Decompensation. Mao D, Reuter CM, Ruzhnikov MRZ, Beck AE, Farrow EG, Emrick LT, Rosenfeld JA, Mackenzie KM, Robak L, Wheeler MT, Burrage LC, Jain M, Liu P, Calame D, Küry S, Sillesen M, Schmitz-Abe K, Tonduti D, Spaccini L, Iascone M, Genetti CA, Koenig MK, Graf M, Tran A, Alejandro M, Undiagnosed Diseases Network, Lee BH, Thiffault I, Agrawal PB, Bernstein JA, Bellen HJ, Chao HT American journal of human genetics 32197074 Am J Hum Genet 2020 Apr 2
Chimeric Antigen Receptor Macrophages Target and Resorb Amyloid Plaques in a Mouse Model of Alzheimer's Disease. Pan Q, Yan P, Kim AB, Xiao Q, Pandey G, Haecker H, Epelman S, Diwan A, Lee JM, DeSelm CJ bioRxiv : the preprint server for biology 37162824 bioRxiv 2023 May 3
Chimeric antigen receptor macrophages target and resorb amyloid plaques. Kim AB, Xiao Q, Yan P, Pan Q, Pandey G, Grathwohl S, Gonzales E, Xu I, Cho Y, Haecker H, Epelman S, Diwan A, Lee JM, DeSelm CJ JCI insight 38516884 JCI Insight 2024 Feb 6
Memory-like Differentiation, Tumor-Targeting mAbs, and Chimeric Antigen Receptors Enhance Natural Killer Cell Responses to Head and Neck Cancer. Jacobs MT, Wong P, Zhou AY, Becker-Hapak M, Marin ND, Marsala L, Foster M, Foltz JA, Cubitt CC, Tran J, Russler-Germain DA, Neal C, Kersting-Schadek S, Chang L, Schappe T, Pence P, McClain E, Zevallos JP, Rich JT, Paniello RC, Jackson RS, Pipkorn P, Adkins DR, DeSelm CJ, Berrien-Elliott MM, Puram SV, Fehniger TA Clinical cancer research : an official journal of the American Association for Cancer Research 37556118 Clin Cancer Res 2023 Oct 13
CARD8 is an inflammasome sensor for HIV-1 protease activity. Wang Q, Gao H, Clark KM, Mugisha CS, Davis K, Tang JP, Harlan GH, DeSelm CJ, Presti RM, Kutluay SB, Shan L Science (New York, N.Y.) 33542150 Science 2021 Mar 19
Dendritic Cell Paucity Leads to Dysfunctional Immune Surveillance in Pancreatic Cancer. Hegde S, Krisnawan VE, Herzog BH, Zuo C, Breden MA, Knolhoff BL, Hogg GD, Tang JP, Baer JM, Mpoy C, Lee KB, Alexander KA, Rogers BE, Murphy KM, Hawkins WG, Fields RC, DeSelm CJ, Schwarz JK, DeNardo DG Cancer cell 32183949 Cancer Cell 2020 Mar 16
Intrinsic tumor resistance to CAR T cells is a dynamic transcriptional state that is exploitable with low-dose radiation. Kim AB, Chou SY, Kang S, Kwon E, Inkman M, Szymanski J, Andruska N, Colgan C, Zhang J, Yang JC, Singh N, DeSelm CJ Blood advances 37093643 Blood Adv 2023 Sep 26
BAP1 promotes osteoclast function by metabolic reprogramming. Rohatgi N, Zou W, Li Y, Cho K, Collins PL, Tycksen E, Pandey G, DeSelm CJ, Patti GJ, Dey A, Teitelbaum SL Nature communications 37740028 Nat Commun 2023 Sep 22
Understanding the Scope of Do-It-Yourself Fecal Microbiota Transplant. Ekekezie C, Perler BK, Wexler A, Duff C, Lillis CJ, Kelly CR The American journal of gastroenterology 31972620 Am J Gastroenterol 2020 Apr
Policies of US Companies Offering Direct-to-Consumer Laboratory Tests. Kalokairinou L, Choi R, Wei NY, Wexler A JAMA internal medicine 37721771 JAMA Intern Med 2023 Nov 1
Direct-to-Consumer Neurotechnology: A Grounded Appraisal. Wexler A AJOB neuroscience 31642764 AJOB Neurosci 2019 Oct-Dec
Neuroenhancement for sale: assessing the website claims of neurofeedback providers in the United States. Wexler A, Nagappan A, Kopyto D, Choi R Journal of cognitive enhancement : towards the integration of theory and practice 34164596 J Cogn Enhanc 2020 Dec
Realizing Present and Future Promise of DIY Biology and Medicine through a Trust Architecture. Rasmussen LM, Guerrini CJ, Kuiken T, Nebeker C, Pearlman A, Ware SB, Wexler A, Zettler PJ The Hastings Center report 33315254 Hastings Cent Rep 2020 Nov
Pregnant at the start of the pandemic: a content analysis of COVID-19-related posts on online pregnancy discussion boards. Choi R, Nagappan A, Kopyto D, Wexler A BMC pregnancy and childbirth 35710387 BMC Pregnancy Childbirth 2022 Jun 16
Opportunity Cost or Opportunity Lost: An Empirical Assessment of Ethical Concerns and Attitudes of EEG Neurofeedback Users. Kalokairinou L, Choi R, Nagappan A, Wexler A Neuroethics 36249541 Neuroethics 2022 Oct
Ethical issues in direct-to-consumer healthcare: A scoping review. Nagappan A, Kalokairinou L, Wexler A PLOS digital health 38349902 PLOS Digit Health 2024 Feb
Ethical and Legal Considerations of Alternative Neurotherapies. Nagappan A, Kalokairinou L, Wexler A AJOB neuroscience 33759705 AJOB Neurosci 2021 Oct-Dec
The Urgent Need to Better Integrate Neuroscience and Neuroethics. Wexler A AJOB neuroscience 34029492 AJOB Neurosci 2020 Jul-Sep
Mapping the Landscape of Do-it-Yourself Medicine. Wexler A Citizen science : theory and practice 36632334 Citiz Sci 2022
Translational Neuroethics: A Vision for a More Integrated, Inclusive, and Impactful Field. Wexler A, Specker Sullivan L AJOB neuroscience 34851808 AJOB Neurosci 2023 Oct-Dec
Innovative Practice Outside of Medical Institutions. Wexler A The American journal of bioethics : AJOB 31135304 Am J Bioeth 2019 Jun
Pregnancy and health in the age of the Internet: A content analysis of online "birth club" forums. Wexler A, Davoudi A, Weissenbacher D, Choi R, O'Connor K, Cummings H, Gonzalez-Hernandez G PloS one 32287266 PLoS One 2020
The Future Is P-Tau-Anticipating Direct-to-Consumer Alzheimer Disease Blood Tests. Largent EA, Wexler A, Karlawish J JAMA neurology 33393982 JAMA Neurol 2021 Apr 1
Brain Wellness "Spas"-Anticipating the Off-label Promotion of Psychedelics. Wexler A, Sisti D JAMA psychiatry 35767292 JAMA Psychiatry 2022 Aug 1
To Counsel or Not to Counsel: Physician Attitudes and Experiences with Do-It-Yourself (DIY) Fecal Microbiota Transplant (FMT). Colt SF, Choi RJ, Wexler A AJOB empirical bioethics 38935586 AJOB Empir Bioeth 2024 Oct-Dec
Off-Label Promotion of Transcranial Magnetic Stimulation on Provider Websites. Wexler A, Nagappan A, Kopyto D, Santarnecchi E, Pascual-Leone A Brain stimulation 33901705 Brain Stimul 2021 May-Jun
Direct-to-consumer orthodontics: surveying the user experience. Wexler A, Nagappan A, Beswerchij A, Choi R Journal of the American Dental Association (1939) 32718492 J Am Dent Assoc 2020 Aug
Neurofeedback as placebo: a case of unintentional deception? Kalokairinou L, Specker Sullivan L, Wexler A Journal of medical ethics 34521768 J Med Ethics 2022 Dec
Author's response. Wexler A Journal of the American Dental Association (1939) 33413846 J Am Dent Assoc 2021 Jan
The promise of direct-to-consumer COVID-19 testing: ethical and regulatory issues. Kalokairinou L, Zettler PJ, Nagappan A, Kyweluk MA, Wexler A Journal of law and the biosciences 33569177 J Law Biosci 2020 Jan-Jun
Oversight of direct-to-consumer neurotechnologies. Wexler A, Reiner PB Science (New York, N.Y.) 30655433 Science 2019 Jan 18
Separating neuroethics from neurohype. Wexler A Nature biotechnology 31399721 Nat Biotechnol 2019 Sep
Ethical considerations for researchers developing and testing minimal-risk devices. Wexler A, Largent E Nature communications 37087446 Nat Commun 2023 Apr 22
Opposing Regulation of Cocaine Seeking by Glutamate and GABA Neurons in the Ventral Pallidum. Heinsbroek JA, Bobadilla AC, Dereschewitz E, Assali A, Chalhoub RM, Cowan CW, Kalivas PW Cell reports 32049028 Cell Rep 2020 Feb 11
Circuit selectivity in drug versus natural reward seeking behaviors. Nall RW, Heinsbroek JA, Nentwig TB, Kalivas PW, Bobadilla AC Journal of neurochemistry 33420731 J Neurochem 2021 Jun
Ventral pallidal regulation of motivated behaviors and reinforcement. Soares-Cunha C, Heinsbroek JA Frontiers in neural circuits 36817646 Front Neural Circuits 2023
The psychedelic drug DOI reduces heroin motivation by targeting 5-HT2A receptors in a heroin and alcohol co-use model. Bonilla J, Giannotti G, Kregar NP, Heinsbroek JA, Olson DE, Peters J Neuropharmacology 39341333 Neuropharmacology 2024 Dec 15
Tabernanthalog Reduces Motivation for Heroin and Alcohol in a Polydrug Use Model. Heinsbroek JA, Giannotti G, Bonilla J, Olson DE, Peters J Psychedelic medicine (New Rochelle, N.Y.) 37360328 Psychedelic Med (New Rochelle) 2023 Jun 1
Ca(V)3.1 T-type calcium channels are important for spatial memory processing in the dorsal subiculum. Joksimovic SM, Ghodsi SM, Heinsbroek JA, Orfila JE, Busquet N, Tesic V, Valdez R, Fine-Raquet B, Jevtovic-Todorovic V, Raol YH, Herson PS, Todorovic SM Neuropharmacology 36586474 Neuropharmacology 2023 Mar 15
A common limiter circuit for opioid choice and relapse identified in a rodent addiction model. Heinsbroek JA, Giannotti G, Mandel MR, Josey M, Aston-Jones G, James MH, Peters J Nature communications 34373454 Nat Commun 2021 Aug 9
Cocaine shifts dopamine D2 receptor sensitivity to gate conditioned behaviors. Gong S, Fayette N, Heinsbroek JA, Ford CP Neuron 34506723 Neuron 2021 Nov 3
Glutamatergic Systems and Memory Mechanisms Underlying Opioid Addiction. Heinsbroek JA, De Vries TJ, Peters J Cold Spring Harbor perspectives in medicine 32341068 Cold Spring Harb Perspect Med 2021 Mar 1
Extinction blunts paraventricular thalamic contributions to heroin relapse. Giannotti G, Gong S, Fayette N, Heinsbroek JA, Orfila JE, Herson PS, Ford CP, Peters J Cell reports 34433067 Cell Rep 2021 Aug 24
Oxytocin and orexin systems bidirectionally regulate the ability of opioid cues to bias reward seeking. Giannotti G, Mottarlini F, Heinsbroek JA, Mandel MR, James MH, Peters J Translational psychiatry 36195606 Transl Psychiatry 2022 Oct 4
Chromosome-Level Genome Assembly of the Bioluminescent Cardinalfish Siphamia tubifer: An Emerging Model for Symbiosis Research. Gould AL, Henderson JB, Lam AW Genome biology and evolution 35349687 Genome Biol Evol 2022 Apr 10
Strain-level diversity of symbiont communities between individuals and populations of a bioluminescent fish. Gould AL, Donohoo SA, Román ED, Neff EE The ISME journal 37891426 ISME J 2023 Dec
Comparative genomics of symbiotic Photobacterium using highly contiguous genome assemblies from long read sequences. Gould AL, Henderson JB Microbial genomics 38112751 Microb Genom 2023 Dec
Museum Genomics Illuminate the High Specificity of a Bioluminescent Symbiosis for a Genus of Reef Fish. Gould AL, Fritts-Penniman A, Gaisiner A Frontiers in ecology and evolution 34485316 Front Ecol Evol 2021 Feb
Oxygen toxicity causes cyclic damage by destabilizing specific Fe-S cluster-containing protein complexes. Baik AH, Haribowo AG, Chen X, Queliconi BB, Barrios AM, Garg A, Maishan M, Campos AR, Matthay MA, Jain IH Molecular cell 36893757 Mol Cell 2023 Mar 16
The Goldilocks Oxygen Principle: not too little and not too much. Flanigan WR, Jain IH Nature cardiovascular research 36816751 Nat Cardiovasc Res 2022 Dec
Turning the Oxygen Dial: Balancing the Highs and Lows. Baik AH, Jain IH Trends in cell biology 32386878 Trends Cell Biol 2020 Jul
In vivo protein turnover rates in varying oxygen tensions nominate MYBBP1A as a mediator of the hyperoxia response. Chen X, Haribowo AG, Baik AH, Fossati A, Stevenson E, Chen YR, Reyes NS, Peng T, Matthay MA, Traglia M, Pico AR, Jarosz DF, Buchwalter A, Ghaemmaghami S, Swaney DL, Jain IH Science advances 38064566 Sci Adv 2023 Dec 8
Organ-specific fuel rewiring in acute and chronic hypoxia redistributes glucose and fatty acid metabolism. Midha AD, Zhou Y, Queliconi BB, Barrios AM, Haribowo AG, Chew BTL, Fong COY, Blecha JE, VanBrocklin H, Seo Y, Jain IH Cell metabolism 36889284 Cell Metab 2023 Mar 7
Breast Radiation Therapy Under COVID-19 Pandemic Resource Constraints-Approaches to Defer or Shorten Treatment From a Comprehensive Cancer Center in the United States. Braunstein LZ, Gillespie EF, Hong L, Xu A, Bakhoum SF, Cuaron J, Mueller B, McCormick B, Cahlon O, Powell S, Khan AJ Advances in radiation oncology 32292842 Adv Radiat Oncol 2020 Jul-Aug
Limited Environmental Serine and Glycine Confer Brain Metastasis Sensitivity to PHGDH Inhibition. Ngo B, Kim E, Osorio-Vasquez V, Doll S, Bustraan S, Liang RJ, Luengo A, Davidson SM, Ali A, Ferraro GB, Fischer GM, Eskandari R, Kang DS, Ni J, Plasger A, Rajasekhar VK, Kastenhuber ER, Bacha S, Sriram RK, Stein BD, Bakhoum SF, Snuderl M, Cotzia P, Healey JH, Mainolfi N, Suri V, Friedman A, Manfredi M, Sabatini DM, Jones DR, Yu M, Zhao JJ, Jain RK, Keshari KR, Davies MA, Vander Heiden MG, Hernando E, Mann M, Cantley LC, Pacold ME Cancer discovery 32571778 Cancer Discov 2020 Sep
Chromosomal instability as a source of genomic plasticity. Al-Rawi DH, Bakhoum SF Current opinion in genetics & development 35526333 Curr Opin Genet Dev 2022 Jun
APOBEC3A drives STING-dependent metastasis. Bakhoum SF Nature cancer 35121905 Nat Cancer 2021 Dec
The Cytosolic DNA-Sensing cGAS-STING Pathway in Cancer. Kwon J, Bakhoum SF Cancer discovery 31852718 Cancer Discov 2020 Jan
Micronuclear collapse from oxidative damage. Di Bona M, Chen Y, Agustinus AS, Mazzagatti A, Duran MA, Deyell M, Bronder D, Hickling J, Hong C, Scipioni L, Tedeschi G, Martin S, Li J, Ruzgaitė A, Riaz N, Shah P, D'Souza EK, Brodtman DZ, Sidoli S, Diplas B, Jalan M, Lee NY, Ordureau A, Izar B, Laughney AM, Powell S, Gratton E, Santaguida S, Maciejowski J, Ly P, Jeitner TM, Bakhoum SF Science (New York, N.Y.) 39208110 Science 2024 Aug 30
Chromosomal instability as a driver of cancer progression. Chen X, Agustinus AS, Li J, DiBona M, Bakhoum SF Nature reviews. Genetics 39075192 Nat Rev Genet 2025 Jan
A Markov chain for numerical chromosomal instability in clonally expanding populations. Elizalde S, Laughney AM, Bakhoum SF PLoS computational biology 30204765 PLoS Comput Biol 2018 Sep
Insights into clonal haematopoiesis from 8,342 mosaic chromosomal alterations. Loh PR, Genovese G, Handsaker RE, Finucane HK, Reshef YA, Palamara PF, Birmann BM, Talkowski ME, Bakhoum SF, McCarroll SA, Price AL Nature 29995854 Nature 2018 Jul
A CINful way to overcome addiction: how chromosomal instability enables cancer to overcome its oncogene addiction. Bronder D, Bakhoum SF EMBO molecular medicine 32072755 EMBO Mol Med 2020 Mar 6
Re-awakening Innate Immune Signaling in Cancer: The Development of Highly Potent ENPP1 Inhibitors. Cogan D, Bakhoum SF Cell chemical biology 33217310 Cell Chem Biol 2020 Nov 19
Metastasis and Immune Evasion from Extracellular cGAMP Hydrolysis. Li J, Duran MA, Dhanota N, Chatila WK, Bettigole SE, Kwon J, Sriram RK, Humphries MP, Salto-Tellez M, James JA, Hanna MG, Melms JC, Vallabhaneni S, Litchfield K, Usaite I, Biswas D, Bareja R, Li HW, Martin ML, Dorsaint P, Cavallo JA, Li P, Pauli C, Gottesdiener L, DiPardo BJ, Hollmann TJ, Merghoub T, Wen HY, Reis-Filho JS, Riaz N, Su SM, Kalbasi A, Vasan N, Powell SN, Wolchok JD, Elemento O, Swanton C, Shoushtari AN, Parkes EE, Izar B, Bakhoum SF Cancer discovery 33372007 Cancer Discov 2021 May
Co-targeting TGF-β and PD-L1 with radiation therapy: The Goldilocks principle. Bakhoum SF, Rudin CM Cell reports. Medicine 34622240 Cell Rep Med 2021 Sep 21
cGAS-STING and the deadly CIN: how chronic inflammation represents a therapeutic vulnerability in chromosomally unstable cancers. Bakhoum SF Trends in cancer 35915014 Trends Cancer 2022 Oct
Biochemical, genomic, and epigenomic profiling of isolated cancer cell lines' micronuclei. Agustinus AS, Bakhoum S Methods in cell biology 36064226 Methods Cell Biol 2022
Genomic characterization of metastatic patterns from prospective clinical sequencing of 25,000 patients. Nguyen B, Fong C, Luthra A, Smith SA, DiNatale RG, Nandakumar S, Walch H, Chatila WK, Madupuri R, Kundra R, Bielski CM, Mastrogiacomo B, Donoghue MTA, Boire A, Chandarlapaty S, Ganesh K, Harding JJ, Iacobuzio-Donahue CA, Razavi P, Reznik E, Rudin CM, Zamarin D, Abida W, Abou-Alfa GK, Aghajanian C, Cercek A, Chi P, Feldman D, Ho AL, Iyer G, Janjigian YY, Morris M, Motzer RJ, O'Reilly EM, Postow MA, Raj NP, Riely GJ, Robson ME, Rosenberg JE, Safonov A, Shoushtari AN, Tap W, Teo MY, Varghese AM, Voss M, Yaeger R, Zauderer MG, Abu-Rustum N, Garcia-Aguilar J, Bochner B, Hakimi A, Jarnagin WR, Jones DR, Molena D, Morris L, Rios-Doria E, Russo P, Singer S, Strong VE, Chakravarty D, Ellenson LH, Gopalan A, Reis-Filho JS, Weigelt B, Ladanyi M, Gonen M, Shah SP, Massague J, Gao J, Zehir A, Berger MF, Solit DB, Bakhoum SF, Sanchez-Vega F, Schultz N Cell 35120664 Cell 2022 Feb 3
A p62-dependent rheostat dictates micronuclei catastrophe and chromosome rearrangements. Martin S, Scorzoni S, Cordone S, Mazzagatti A, Beznoussenko GV, Gunn AL, Di Bona M, Eliezer Y, Leor G, Ben-Yishay T, Loffreda A, Cancila V, Rainone MC, Ippolito MR, Martis V, Bedin F, Garrè M, Vaites LP, Vasapolli P, Polo S, Parazzoli D, Tripodo C, Mironov AA, Cuomo A, Ben-David U, Bakhoum SF, Hatch EM, Ly P, Santaguida S Science (New York, N.Y.) 39208097 Science 2024 Aug 30
Loss of Pip4k2c confers liver-metastatic organotropism through insulin-dependent PI3K-AKT pathway activation. Rogava M, Aprati TJ, Chi WY, Melms JC, Hug C, Davis SH, Earlie EM, Chung C, Deshmukh SK, Wu S, Sledge G, Tang S, Ho P, Amin AD, Caprio L, Gurjao C, Tagore S, Ngo B, Lee MJ, Zanetti G, Wang Y, Chen S, Ge W, Melo LMN, Allies G, Rösler J, Gibney GT, Schmitz OJ, Sykes M, Creusot RJ, Tüting T, Schadendorf D, Röcken M, Eigentler TK, Molotkov A, Mintz A, Bakhoum SF, Beyaz S, Cantley LC, Sorger PK, Meckelmann SW, Tasdogan A, Liu D, Laughney AM, Izar B Nature cancer 38286827 Nat Cancer 2024 Mar
Intratumoral TREX1 Induction Promotes Immune Evasion by Limiting Type I IFN. Toufektchan E, Dananberg A, Striepen J, Hickling JH, Shim A, Chen Y, Nichols A, Duran Paez MA, Mohr L, Bakhoum SF, Maciejowski J Cancer immunology research 38408184 Cancer Immunol Res 2024 Jun 4
Epigenetic dysregulation from chromosomal transit in micronuclei. Agustinus AS, Al-Rawi D, Dameracharla B, Raviram R, Jones BSCL, Stransky S, Scipioni L, Luebeck J, Di Bona M, Norkunaite D, Myers RM, Duran M, Choi S, Weigelt B, Yomtoubian S, McPherson A, Toufektchan E, Keuper K, Mischel PS, Mittal V, Shah SP, Maciejowski J, Storchova Z, Gratton E, Ly P, Landau D, Bakhoum MF, Koche RP, Sidoli S, Bafna V, David Y, Bakhoum SF Nature 37286593 Nature 2023 Jul
The Evolution of STING Signaling and Its Involvement in Cancer. Vashi N, Bakhoum SF Trends in biochemical sciences 33461879 Trends Biochem Sci 2021 Jun
Induction of APOBEC3 Exacerbates DNA Replication Stress and Chromosomal Instability in Early Breast and Lung Cancer Evolution. Venkatesan S, Angelova M, Puttick C, Zhai H, Caswell DR, Lu WT, Dietzen M, Galanos P, Evangelou K, Bellelli R, Lim EL, Watkins TBK, Rowan A, Teixeira VH, Zhao Y, Chen H, Ngo B, Zalmas LP, Al Bakir M, Hobor S, Grönroos E, Pennycuick A, Nigro E, Campbell BB, Brown WL, Akarca AU, Marafioti T, Wu MY, Howell M, Boulton SJ, Bertoli C, Fenton TR, de Bruin RAM, Maya-Mendoza A, Santoni-Rugiu E, Hynds RE, Gorgoulis VG, Jamal-Hanjani M, McGranahan N, Harris RS, Janes SM, Bartkova J, Bakhoum SF, Bartek J, Kanu N, Swanton C, TRACERx Consortium Cancer discovery 33947663 Cancer Discov 2021 Oct
Deep learning predicts chromosomal instability from histopathology images. Xu Z, Verma A, Naveed U, Bakhoum SF, Khosravi P, Elemento O iScience 33997679 iScience 2021 May 21
Cancer metastasis as a non-healing wound. Deyell M, Garris CS, Laughney AM British journal of cancer 33731858 Br J Cancer 2021 Apr
The clinical and molecular significance associated with STING signaling in breast cancer. Parkes EE, Humphries MP, Gilmore E, Sidi FA, Bingham V, Phyu SM, Craig S, Graham C, Miller J, Griffin D, Salto-Tellez M, Madden SF, Kennedy RD, Bakhoum SF, McQuaid S, Buckley NE NPJ breast cancer 34172750 NPJ Breast Cancer 2021 Jun 25
The pleiotropic roles of cGAS-STING signaling in the tumor microenvironment. Li J, Bakhoum SF Journal of molecular cell biology 35325182 J Mol Cell Biol 2022 Aug 5
The Multifaceted Role of Chromosomal Instability in Cancer and Its Microenvironment. Bakhoum SF, Cantley LC Cell 30193109 Cell 2018 Sep 6
Loss of polycomb repressive complex 1 activity and chromosomal instability drive uveal melanoma progression. Bakhoum MF, Francis JH, Agustinus A, Earlie EM, Di Bona M, Abramson DH, Duran M, Masilionis I, Molina E, Shoushtari AN, Goldbaum MH, Mischel PS, Bakhoum SF, Laughney AM Nature communications 34518527 Nat Commun 2021 Sep 13
Pervasive chromosomal instability and karyotype order in tumour evolution. Watkins TBK, Lim EL, Petkovic M, Elizalde S, Birkbak NJ, Wilson GA, Moore DA, Grönroos E, Rowan A, Dewhurst SM, Demeulemeester J, Dentro SC, Horswell S, Au L, Haase K, Escudero M, Rosenthal R, Bakir MA, Xu H, Litchfield K, Lu WT, Mourikis TP, Dietzen M, Spain L, Cresswell GD, Biswas D, Lamy P, Nordentoft I, Harbst K, Castro-Giner F, Yates LR, Caramia F, Jaulin F, Vicier C, Tomlinson IPM, Brastianos PK, Cho RJ, Bastian BC, Dyrskjøt L, Jönsson GB, Savas P, Loi S, Campbell PJ, Andre F, Luscombe NM, Steeghs N, Tjan-Heijnen VCG, Szallasi Z, Turajlic S, Jamal-Hanjani M, Van Loo P, Bakhoum SF, Schwarz RF, McGranahan N, Swanton C Nature 32879494 Nature 2020 Nov
Targeting chromosomal instability in patients with cancer. Al-Rawi DH, Lettera E, Li J, DiBona M, Bakhoum SF Nature reviews. Clinical oncology 38992122 Nat Rev Clin Oncol 2024 Sep
Expanding the Role of STING in Cellular Homeostasis and Transformation. Li J, Bakhoum SF Trends in cancer 30961826 Trends Cancer 2019 Apr
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis. Biermann J, Melms JC, Amin AD, Wang Y, Caprio LA, Karz A, Tagore S, Barrera I, Ibarra-Arellano MA, Andreatta M, Fullerton BT, Gretarsson KH, Sahu V, Mangipudy VS, Nguyen TTT, Nair A, Rogava M, Ho P, Koch PD, Banu M, Humala N, Mahajan A, Walsh ZH, Shah SB, Vaccaro DH, Caldwell B, Mu M, Wünnemann F, Chazotte M, Berhe S, Luoma AM, Driver J, Ingham M, Khan SA, Rapisuwon S, Slingluff CL Jr, Eigentler T, Röcken M, Carvajal R, Atkins MB, Davies MA, Agustinus A, Bakhoum SF, Azizi E, Siegelin M, Lu C, Carmona SJ, Hibshoosh H, Ribas A, Canoll P, Bruce JN, Bi WL, Agrawal P, Schapiro D, Hernando E, Macosko EZ, Chen F, Schwartz GK, Izar B Cell 35803246 Cell 2022 Jul 7
Regenerative lineages and immune-mediated pruning in lung cancer metastasis. Laughney AM, Hu J, Campbell NR, Bakhoum SF, Setty M, Lavallée VP, Xie Y, Masilionis I, Carr AJ, Kottapalli S, Allaj V, Mattar M, Rekhtman N, Xavier JB, Mazutis L, Poirier JT, Rudin CM, Pe'er D, Massagué J Nature medicine 32042191 Nat Med 2020 Feb
Non-cell-autonomous cancer progression from chromosomal instability. Li J, Hubisz MJ, Earlie EM, Duran MA, Hong C, Varela AA, Lettera E, Deyell M, Tavora B, Havel JJ, Phyu SM, Amin AD, Budre K, Kamiya E, Cavallo JA, Garris C, Powell S, Reis-Filho JS, Wen H, Bettigole S, Khan AJ, Izar B, Parkes EE, Laughney AM, Bakhoum SF Nature 37612508 Nature 2023 Aug
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Cyclic peptide structure prediction and design using AlphaFold. Rettie SA, Campbell KV, Bera AK, Kang A, Kozlov S, De La Cruz J, Adebomi V, Zhou G, DiMaio F, Ovchinnikov S, Bhardwaj G bioRxiv : the preprint server for biology 36865323 bioRxiv 2023 Feb 26
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Polygenic risk scores of endo-phenotypes identify the effect of genetic background in congenital heart disease. Spendlove SJ, Bondhus L, Lluri G, Sul JH, Arboleda VA HGG advances 35599848 HGG Adv 2022 Jul 14
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Disease risk and healthcare utilization among ancestrally diverse groups in the Los Angeles region. Caggiano C, Boudaie A, Shemirani R, Mefford J, Petter E, Chiu A, Ercelen D, He R, Tward D, Paul KC, Chang TS, Pasaniuc B, Kenny EE, Shortt JA, Gignoux CR, Balliu B, Arboleda VA, Belbin G, Zaitlen N Nature medicine 37464048 Nat Med 2023 Jul
From chemoproteomic-detected amino acids to genomic coordinates: insights into precise multi-omic data integration. Palafox MF, Desai HS, Arboleda VA, Backus KM Molecular systems biology 33599394 Mol Syst Biol 2021 Feb
Leveraging genomic diversity for discovery in an electronic health record linked biobank: the UCLA ATLAS Community Health Initiative. Johnson R, Ding Y, Venkateswaran V, Bhattacharya A, Boulier K, Chiu A, Knyazev S, Schwarz T, Freund M, Zhan L, Burch KS, Caggiano C, Hill B, Rakocz N, Balliu B, Denny CT, Sul JH, Zaitlen N, Arboleda VA, Halperin E, Sankararaman S, Butte MJ, UCLA Precision Health Data Discovery Repository Working Group, UCLA Precision Health ATLAS Working Group, Lajonchere C, Geschwind DH, Pasaniuc B Genome medicine 36085083 Genome Med 2022 Sep 9
Swab-Seq: A high-throughput platform for massively scaled up SARS-CoV-2 testing. Bloom JS, Sathe L, Munugala C, Jones EM, Gasperini M, Lubock NB, Yarza F, Thompson EM, Kovary KM, Park J, Marquette D, Kay S, Lucas M, Love T, Booeshaghi AS, Brandenberg OF, Guo L, Boocock J, Hochman M, Simpkins SW, Lin I, LaPierre N, Hong D, Zhang Y, Oland G, Choe BJ, Chandrasekaran S, Hilt EE, Butte MJ, Damoiseaux R, Kravit C, Cooper AR, Yin Y, Pachter L, Garner OB, Flint J, Eskin E, Luo C, Kosuri S, Kruglyak L, Arboleda VA medRxiv : the preprint server for health sciences 32909008 medRxiv 2021 Mar 9
Electronic health record signatures identify undiagnosed patients with common variable immunodeficiency disease. Johnson R, Stephens AV, Mester R, Knyazev S, Kohn LA, Freund MK, Bondhus L, Hill BL, Schwarz T, Zaitlen N, Arboleda VA, A Bastarache L, Pasaniuc B, Butte MJ Science translational medicine 38691621 Sci Transl Med 2024 May
Novel variants in KAT6B spectrum of disorders expand our knowledge of clinical manifestations and molecular mechanisms. Yabumoto M, Kianmahd J, Singh M, Palafox MF, Wei A, Elliott K, Goodloe DH, Dean SJ, Gooch C, Murray BK, Swartz E, Schrier Vergano SA, Towne MC, Nugent K, Roeder ER, Kresge C, Pletcher BA, Grand K, Graham JM Jr, Gates R, Gomez-Ospina N, Ramanathan S, Clark RD, Glaser K, Benke PJ, Cohen JS, Fatemi A, Mu W, Baranano KW, Madden JA, Gubbels CS, Yu TW, Agrawal PB, Chambers MK, Phornphutkul C, Pugh JA, Tauber KA, Azova S, Smith JR, O'Donnell-Luria A, Medsker H, Srivastava S, Krakow D, Schweitzer DN, Arboleda VA Molecular genetics & genomic medicine 34519438 Mol Genet Genomic Med 2021 Oct
Metabolic reprogramming and epigenetic changes of vital organs in SARS-CoV-2-induced systemic toxicity. Li S, Ma F, Yokota T, Garcia G Jr, Palermo A, Wang Y, Farrell C, Wang YC, Wu R, Zhou Z, Pan C, Morselli M, Teitell MA, Ryazantsev S, Fishbein GA, Hoeve JT, Arboleda VA, Bloom J, Dillon B, Pellegrini M, Lusis AJ, Graeber TG, Arumugaswami V, Deb A JCI insight 33284134 JCI Insight 2021 Jan 25
Lean Principles to Improve Quality in High-Throughput COVID-19 Testing Using SwabSeq: A Barcoded Sequencing-Based Testing Platform. Jones J, Saul R, Sathe L, Xie J, Marquette D, Arboleda VA Laboratory medicine 34436601 Lab Med 2022 Jan 6
The omics era: a nexus of untapped potential for Mendelian chromatinopathies. Nava AA, Arboleda VA Human genetics 37115317 Hum Genet 2024 Apr
Lower Severe Acute Respiratory Syndrome Coronavirus 2 Viral Shedding Following Coronavirus Disease 2019 Vaccination Among Healthcare Workers in Los Angeles, California. Adamson PC, Pfeffer MA, Arboleda VA, Garner OB, de St Maurice A, von Bredow B, Flint J, Kruglyak L, Currier JS Open forum infectious diseases 35005055 Open Forum Infect Dis 2021 Nov
DMRscaler: a scale-aware method to identify regions of differential DNA methylation spanning basepair to multi-megabase features. Bondhus L, Wei A, Arboleda VA BMC bioinformatics 36064314 BMC Bioinformatics 2022 Sep 5
Increased Frequency of Clonal Hematopoiesis of Indeterminate Potential in Bloom Syndrome Probands and Carriers. Lin I, Wei A, Gebo TA, Boutros PC, Flanagan M, Kucine N, Cunniff C, Arboleda VA, Chang VY medRxiv : the preprint server for health sciences 38370823 medRxiv 2024 Feb 6
ASXL1 truncating variants in BOS and myeloid leukemia drive shared disruption of Wnt-signaling pathways but have differential isoform usage of RUNX3. Lin I, Awamleh Z, Sinvhal M, Wan A, Bondhus L, Wei A, Russell BE, Weksberg R, Arboleda VA BMC medical genomics 39614348 BMC Med Genomics 2024 Nov 29
A reference haplotype panel for genome-wide imputation of short tandem repeats. Saini S, Mitra I, Mousavi N, Fotsing SF, Gymrek M Nature communications 30353011 Nat Commun 2018 Oct 23
Targeted genotyping of variable number tandem repeats with adVNTR. Bakhtiari M, Shleizer-Burko S, Gymrek M, Bansal V, Bafna V Genome research 30352806 Genome Res 2018 Nov
Missing heritability may be hiding in repeats. Gymrek M, Goren A Science (New York, N.Y.) 34554784 Science 2021 Sep 24
TRTools: a toolkit for genome-wide analysis of tandem repeats. Mousavi N, Margoliash J, Pusarla N, Saini S, Yanicky R, Gymrek M Bioinformatics (Oxford, England) 32805020 Bioinformatics 2021 May 5
Deep learning predicts the impact of regulatory variants on cell-type-specific enhancers in the brain. Zheng A, Shen Z, Glass CK, Gymrek M Bioinformatics advances 36726730 Bioinform Adv 2023
WebSTR: A Population-wide Database of Short Tandem Repeat Variation in Humans. Lundström OS, Adriaan Verbiest M, Xia F, Jam HZ, Zlobec I, Anisimova M, Gymrek M Journal of molecular biology 37678708 J Mol Biol 2023 Oct 15
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Patterns of de novo tandem repeat mutations and their role in autism. Mitra I, Huang B, Mousavi N, Ma N, Lamkin M, Yanicky R, Shleizer-Burko S, Lohmueller KE, Gymrek M Nature 33442040 Nature 2021 Jan
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The impact of short tandem repeat variation on gene expression. Fotsing SF, Margoliash J, Wang C, Saini S, Yanicky R, Shleizer-Burko S, Goren A, Gymrek M Nature genetics 31676866 Nat Genet 2019 Nov
The Promise of Combining Radiation Therapy With Immunotherapy. Jagodinsky JC, Harari PM, Morris ZS International journal of radiation oncology, biology, physics 32335187 Int J Radiat Oncol Biol Phys 2020 Sep 1
Using Radiation Therapy to Prime and Propagate an Anti-tumor Immune Response Against Brain Tumors. Onate AJ, Clark PA, Morris ZS Neuromolecular medicine 34081276 Neuromolecular Med 2022 Mar
Tumor-Specific Inhibition of In Situ Vaccination by Distant Untreated Tumor Sites. Morris ZS, Guy EI, Werner LR, Carlson PM, Heinze CM, Kler JS, Busche SM, Jaquish AA, Sriramaneni RN, Carmichael LL, Loibner H, Gillies SD, Korman AJ, Erbe AK, Hank JA, Rakhmilevich AL, Harari PM, Sondel PM Cancer immunology research 29748391 Cancer Immunol Res 2018 Jul
In Situ Vaccination Following Intratumoral Injection of IL2 and Poly-l-lysine/Iron Oxide/CpG Nanoparticles to a Radiated Tumor Site. Zhang Y, Rahman MM, Clark PA, Sriramaneni RN, Havighurst T, Kerr CP, Zhu M, Jones J, Wang X, Kim K, Gong S, Morris ZS ACS nano 37216491 ACS Nano 2023 Jun 13
Low-Dose Radiation Potentiates the Propagation of Anti-Tumor Immunity against Melanoma Tumor in the Brain after In Situ Vaccination at a Tumor outside the Brain. Clark PA, Sriramaneni RN, Bates AM, Jin WJ, Jagodinsky JC, Hernandez R, Le T, Jeffery JJ, Marsh IR, Grudzinski JJ, Aluicio-Sarduy E, Barnhart TE, Anderson BR, Chakravarty I, Arthur IS, Kim K, Engle JW, Bednarz BP, Weichert JP, Morris ZS Radiation research 33826741 Radiat Res 2021 Jun 1
Low-dose targeted radionuclide therapy renders immunologically cold tumors responsive to immune checkpoint blockade. Patel RB, Hernandez R, Carlson P, Grudzinski J, Bates AM, Jagodinsky JC, Erbe A, Marsh IR, Arthur I, Aluicio-Sarduy E, Sriramaneni RN, Jin WJ, Massey C, Rakhmilevich AL, Vail D, Engle JW, Le T, Kim K, Bednarz B, Sondel PM, Weichert J, Morris ZS Science translational medicine 34261797 Sci Transl Med 2021 Jul 14
Combination of radiation therapy, bempegaldesleukin, and checkpoint blockade eradicates advanced solid tumors and metastases in mice. Pieper AA, Rakhmilevich AL, Spiegelman DV, Patel RB, Birstler J, Jin WJ, Carlson PM, Charych DH, Hank JA, Erbe AK, Overwijk WW, Morris ZS, Sondel PM Journal for immunotherapy of cancer 34172518 J Immunother Cancer 2021 Jun
Depth of tumor implantation affects response to in situ vaccination in a syngeneic murine melanoma model. Carlson PM, Mohan M, Rodriguez M, Subbotin V, Sun CX, Patel RB, Birstler J, Hank JA, Rakhmilevich AL, Morris ZS, Erbe AK, Sondel PM Journal for immunotherapy of cancer 33858849 J Immunother Cancer 2021 Apr
Radiation Augments the Local Anti-Tumor Effect of In Situ Vaccine With CpG-Oligodeoxynucleotides and Anti-OX40 in Immunologically Cold Tumor Models. Pieper AA, Zangl LM, Speigelman DV, Feils AS, Hoefges A, Jagodinsky JC, Felder MA, Tsarovsky NW, Arthur IS, Brown RJ, Birstler J, Le T, Carlson PM, Bates AM, Hank JA, Rakhmilevich AL, Erbe AK, Sondel PM, Patel RB, Morris ZS Frontiers in immunology 34868010 Front Immunol 2021
Temporal analysis of type 1 interferon activation in tumor cells following external beam radiotherapy or targeted radionuclide therapy. Jagodinsky JC, Jin WJ, Bates AM, Hernandez R, Grudzinski JJ, Marsh IR, Chakravarty I, Arthur IS, Zangl LM, Brown RJ, Nystuen EJ, Emma SE, Kerr C, Carlson PM, Sriramaneni RN, Engle JW, Aluicio-Sarduy E, Barnhart TE, Le T, Kim K, Bednarz BP, Weichert JP, Patel RB, Morris ZS Theranostics 33995649 Theranostics 2021
Combination of Bempegaldesleukin and Anti-CTLA-4 Prevents Metastatic Dissemination After Primary Resection or Radiotherapy in a Preclinical Model of Non-Small Cell Lung Cancer. Bates AM, Brown RJ, Pieper AA, Zangl LM, Arthur I, Carlson PM, Le T, Sosa GA, Clark PA, Sriramaneni RN, Kim K, Patel RB, Morris ZS Frontiers in oncology 33937052 Front Oncol 2021
ATM inhibition augments type I interferon response and antitumor T-cell immunity when combined with radiation therapy in murine tumor models. Jin WJ, Zangl LM, Hyun M, Massoud E, Schroeder K, Alexandridis RA, Morris ZS Journal for immunotherapy of cancer 37730275 J Immunother Cancer 2023 Sep
Factors impacting the efficacy of the in-situ vaccine with CpG and OX40 agonist. Pieper AA, Spiegelman DV, Felder MAR, Feils AS, Tsarovsky NW, Zaborek J, Morris ZS, Erbe AK, Rakhmilevich AL, Sondel PM Cancer immunology, immunotherapy : CII 37016127 Cancer Immunol Immunother 2023 Jul
MRI-Guided Radiation Therapy. Lee SL, Hall WA, Morris ZS, Christensen L, Bassetti M Advances in oncology 37064601 Adv Oncol 2021 May
Transcriptional-mediated effects of radiation on the expression of immune susceptibility markers in melanoma. Werner LR, Kler JS, Gressett MM, Riegert M, Werner LK, Heinze CM, Kern JG, Abbariki M, Erbe AK, Patel RB, Sriramaneni RN, Harari PM, Morris ZS Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology 28893414 Radiother Oncol 2017 Sep
Priming and Propagating Anti-tumor Immunity: Focal Hypofractionated Radiation for in Situ Vaccination and Systemic Targeted Radionuclide Theranostics for Immunomodulation of Tumor Microenvironments. Jagodinsky JC, Morris ZS Seminars in radiation oncology 32381297 Semin Radiat Oncol 2020 Apr
Multifunctional nanoparticle potentiates the in situ vaccination effect of radiation therapy and enhances response to immune checkpoint blockade. Zhang Y, Sriramaneni RN, Clark PA, Jagodinsky JC, Ye M, Jin W, Wang Y, Bates A, Kerr CP, Le T, Allawi R, Wang X, Xie R, Havighurst TC, Chakravarty I, Rakhmilevich AL, O'Leary KA, Schuler LA, Sondel PM, Kim K, Gong S, Morris ZS Nature communications 35999216 Nat Commun 2022 Aug 23
Optimizing Flow Cytometric Analysis of Immune Cells in Samples Requiring Cryopreservation from Tumor-Bearing Mice. Carlson PM, Mohan M, Patel RB, Birstler J, Nettenstrom L, Sheerar D, Fox K, Rodriguez M, Hoefges A, Hernandez R, Zahm C, Kim K, McNeel DG, Weichert J, Morris ZS, Sondel PM Journal of immunology (Baltimore, Md. : 1950) 34261667 J Immunol 2021 Jul 15
Local TLR4 stimulation augments in situ vaccination induced via local radiation and anti-CTLA-4 checkpoint blockade through induction of CD8 T-cell independent Th1 polarization. Jagodinsky JC, Bates AM, Clark PA, Sriramaneni RN, Havighurst TC, Chakravarty I, Nystuen EJ, Kim K, Sondel PM, Jin WJ, Morris ZS Journal for immunotherapy of cancer 36192087 J Immunother Cancer 2022 Oct
The Radiobiology of Radiopharmaceuticals. Morris ZS, Wang AZ, Knox SJ Seminars in radiation oncology 33246632 Semin Radiat Oncol 2021 Jan
Development of an In Situ Cancer Vaccine via Combinational Radiation and Bacterial-Membrane-Coated Nanoparticles. Patel RB, Ye M, Carlson PM, Jaquish A, Zangl L, Ma B, Wang Y, Arthur I, Xie R, Brown RJ, Wang X, Sriramaneni R, Kim K, Gong S, Morris ZS Advanced materials (Deerfield Beach, Fla.) 31523868 Adv Mater 2019 Oct
(90)Y-NM600 targeted radionuclide therapy induces immunologic memory in syngeneic models of T-cell Non-Hodgkin's Lymphoma. Hernandez R, Walker KL, Grudzinski JJ, Aluicio-Sarduy E, Patel R, Zahm CD, Pinchuk AN, Massey CF, Bitton AN, Brown RJ, Sondel PM, Morris ZS, Engle JW, Capitini CM, Weichert JP Communications biology 30820474 Commun Biol 2019
Tumor-Specific Antibody, Cetuximab, Enhances the In Situ Vaccine Effect of Radiation in Immunologically Cold Head and Neck Squamous Cell Carcinoma. Jin WJ, Erbe AK, Schwarz CN, Jaquish AA, Anderson BR, Sriramaneni RN, Jagodinsky JC, Bates AM, Clark PA, Le T, Lan KH, Chen Y, Kim K, Morris ZS Frontiers in immunology 33281820 Front Immunol 2020
In situ Vaccine Plus Checkpoint Blockade Induces Memory Humoral Response. Baniel CC, Heinze CM, Hoefges A, Sumiec EG, Hank JA, Carlson PM, Jin WJ, Patel RB, Sriramaneni RN, Gillies SD, Erbe AK, Schwarz CN, Pieper AA, Rakhmilevich AL, Sondel PM, Morris ZS Frontiers in immunology 32849544 Front Immunol 2020
A multipurpose brachytherapy catheter to enable intratumoral injection. Jagodinsky JC, Medeiros G, Raj HH, Razuan A, Locsin A, Dempsey TG, Tang B, Chakravarty I, Clark PA, Sriramaneni RN, Jin WJ, Lan KH, Das RK, Miller JR, Suarez-Gonzalez D, Morris ZS Brachytherapy 33785280 Brachytherapy 2021 Jul-Aug
Combining brachytherapy and immunotherapy to achieve in situ tumor vaccination: A review of cooperative mechanisms and clinical opportunities. Patel RB, Baniel CC, Sriramaneni RN, Bradley K, Markovina S, Morris ZS Brachytherapy 30078541 Brachytherapy 2018 Nov-Dec
In situ vaccination at a peripheral tumor site augments response against melanoma brain metastases. Clark PA, Sriramaneni RN, Jin WJ, Jagodinsky JC, Bates AM, Jaquish AA, Anderson BR, Le T, Lubin JA, Chakravarty I, Arthur IS, Heinze CM, Guy EI, Kler J, Klar KA, Carlson PM, Kim KM, Kuo JS, Morris ZS Journal for immunotherapy of cancer 32690669 J Immunother Cancer 2020 Jul
Combined innate and adaptive immunotherapy overcomes resistance of immunologically cold syngeneic murine neuroblastoma to checkpoint inhibition. Voeller J, Erbe AK, Slowinski J, Rasmussen K, Carlson PM, Hoefges A, VandenHeuvel S, Stuckwisch A, Wang X, Gillies SD, Patel RB, Farrel A, Rokita JL, Maris J, Hank JA, Morris ZS, Rakhmilevich AL, Sondel PM Journal for immunotherapy of cancer 31810498 J Immunother Cancer 2019 Dec 6
Developments in Combining Targeted Radionuclide Therapies and Immunotherapies for Cancer Treatment. Kerr CP, Grudzinski JJ, Nguyen TP, Hernandez R, Weichert JP, Morris ZS Pharmaceutics 36678756 Pharmaceutics 2022 Dec 30
Radiation to all macroscopic sites of tumor permits greater systemic antitumor response to in situ vaccination. Carlson PM, Patel RB, Birstler J, Rodriquez M, Sun C, Erbe AK, Bates AM, Marsh I, Grudzinski J, Hernandez R, Pieper AA, Feils AS, Rakhmilevich AL, Weichert JP, Bednarz BP, Sondel PM, Morris ZS Journal for immunotherapy of cancer 36639155 J Immunother Cancer 2023 Jan
Antibody landscape of C57BL/6 mice cured of B78 melanoma via a combined radiation and immunocytokine immunotherapy regimen. Hoefges A, McIlwain SJ, Erbe AK, Mathers N, Xu A, Melby D, Tetreault K, Le T, Kim K, Pinapati RS, Garcia BH, Patel J, Heck M, Feils AS, Tsarovsky N, Hank JA, Morris ZS, Ong IM, Sondel PM Frontiers in immunology 38077403 Front Immunol 2023
NK cells propagate T cell immunity following in situ tumor vaccination. Jin WJ, Jagodinsky JC, Vera JM, Clark PA, Zuleger CL, Erbe AK, Ong IM, Le T, Tetreault K, Berg T, Rakhmilevich AL, Kim K, Newton MA, Albertini MR, Sondel PM, Morris ZS Cell reports 38096050 Cell Rep 2023 Dec 26
Intratumoral radiation dose heterogeneity augments antitumor immunity in mice and primes responses to checkpoint blockade. Jagodinsky JC, Vera JM, Jin WJ, Shea AG, Clark PA, Sriramaneni RN, Havighurst TC, Chakravarthy I, Allawi RH, Kim K, Harari PM, Sondel PM, Newton MA, Crittenden MR, Gough MJ, Miller JR, Ong IM, Morris ZS Science translational medicine 39292804 Sci Transl Med 2024 Sep 18
Sound-induced motion in chimpanzees does not imply shared ancestry for music or dance. Bertolo M, Singh M, Mehr SA Proceedings of the National Academy of Sciences of the United States of America 33443199 Proc Natl Acad Sci U S A 2021 Jan 12
Sight-over-sound judgments of music performances are replicable effects with limited interpretability. Mehr SA, Scannell DA, Winner E PloS one 30183719 PLoS One 2018
Form and Function in Human Song. Mehr SA, Singh M, York H, Glowacki L, Krasnow MM Current biology : CB 29395919 Curr Biol 2018 Feb 5
The presence of fear: How subjective fear, not physiological changes, shapes the experience of presence. Maymon CN, Crawford MT, Blackburne K, Botes A, Carnegie K, Mehr SA, Meier J, Murphy J, Miles NL, Robinson K, Tooley M, Grimshaw GM Journal of experimental psychology. General 38635168 J Exp Psychol Gen 2024 Jun
Toward a productive evolutionary understanding of music. Mehr SA, Krasnow MM, Bryant GA, Hagen EH The Behavioral and brain sciences 34588071 Behav Brain Sci 2021 Sep 30
Expectancy Effects Threaten the Inferential Validity of Synchrony-Prosociality Research. Atwood S, Schachner A, Mehr SA Open mind : discoveries in cognitive science 36891035 Open Mind (Camb) 2022
Universal interpretations of vocal music. Yurdum L, Singh M, Glowacki L, Vardy T, Atkinson QD, Hilton CB, Sauter D, Krasnow MM, Mehr SA Proceedings of the National Academy of Sciences of the United States of America 37676911 Proc Natl Acad Sci U S A 2023 Sep 12
Universality and diversity in human song. Mehr SA, Singh M, Knox D, Ketter DM, Pickens-Jones D, Atwood S, Lucas C, Jacoby N, Egner AA, Hopkins EJ, Howard RM, Hartshorne JK, Jennings MV, Simson J, Bainbridge CM, Pinker S, O'Donnell TJ, Krasnow MM, Glowacki L Science (New York, N.Y.) 31753969 Science 2019 Nov 22
Online Developmental Science to Foster Innovation, Access, and Impact. Sheskin M, Scott K, Mills CM, Bergelson E, Bonawitz E, Spelke ES, Fei-Fei L, Keil FC, Gweon H, Tenenbaum JB, Jara-Ettinger J, Adolph KE, Rhodes M, Frank MC, Mehr SA, Schulz L Trends in cognitive sciences 32624386 Trends Cogn Sci 2020 Sep
Origins of music in credible signaling. Mehr SA, Krasnow MM, Bryant GA, Hagen EH The Behavioral and brain sciences 32843107 Behav Brain Sci 2020 Aug 26
Response to vocal music in Angelman syndrome contrasts with Prader-Willi syndrome. Kotler J, Mehr SA, Egner A, Haig D, Krasnow MM Evolution and human behavior : official journal of the Human Behavior and Evolution Society 32655274 Evol Hum Behav 2019 Sep
The ability to predict actions of others from distributed cues is still developing in 6- to 8-year-old children. McMahon E, Kim D, Mehr SA, Nakayama K, Spelke ES, Vaziri-Pashkam M Journal of vision 34003244 J Vis 2021 May 3
Citizen science can help to alleviate the generalizability crisis. Hilton CB, Mehr SA The Behavioral and brain sciences 35139973 Behav Brain Sci 2022 Feb 10
How games can make behavioural science better. Long B, Simson J, Buxó-Lugo A, Watson DG, Mehr SA Nature 36650244 Nature 2023 Jan
Cross-Cultural Work in Music Cognition: Challenges, Insights, and Recommendations. Jacoby N, Margulis EH, Clayton M, Hannon E, Honing H, Iversen J, Klein TR, Mehr SA, Pearson L, Peretz I, Perlman M, Polak R, Ravignani A, Savage PE, Steingo G, Stevens CJ, Trainor L, Trehub S, Veal M, Wald-Fuhrmann M Music perception 36936548 Music Percept 2020 Feb
Developmental psychologists should adopt citizen science to improve generalization and reproducibility. Li W, Germine LT, Mehr SA, Srinivasan M, Hartshorne J Infant and child development 38515737 Infant Child Dev 2024 Jan-Feb
Music, a piece of many puzzles in developmental science. Mehr SA, Bortfeld H Developmental science 37501524 Dev Sci 2023 Sep
Language experience predicts music processing in a half-million speakers of fifty-four languages. Liu J, Hilton CB, Bergelson E, Mehr SA Current biology : CB 37105166 Curr Biol 2023 May 22
Across demographics and recent history, most parents sing to their infants and toddlers daily. Yan R, Jessani G, Spelke ES, de Villiers P, de Villiers J, Mehr SA Philosophical transactions of the Royal Society of London. Series B, Biological sciences 34719251 Philos Trans R Soc Lond B Biol Sci 2021 Dec 20
Acoustic regularities in infant-directed speech and song across cultures. Hilton CB, Moser CJ, Bertolo M, Lee-Rubin H, Amir D, Bainbridge CM, Simson J, Knox D, Glowacki L, Alemu E, Galbarczyk A, Jasienska G, Ross CT, Neff MB, Martin A, Cirelli LK, Trehub SE, Song J, Kim M, Schachner A, Vardy TA, Atkinson QD, Salenius A, Andelin J, Antfolk J, Madhivanan P, Siddaiah A, Placek CD, Salali GD, Keestra S, Singh M, Collins SA, Patton JQ, Scaff C, Stieglitz J, Cutipa SC, Moya C, Sagar RR, Anyawire M, Mabulla A, Wood BM, Krasnow MM, Mehr SA Nature human behaviour 35851843 Nat Hum Behav 2022 Nov
Spectro-temporal acoustical markers differentiate speech from song across cultures. Albouy P, Mehr SA, Hoyer RS, Ginzburg J, Du Y, Zatorre RJ Nature communications 38844457 Nat Commun 2024 Jun 6
Infants relax in response to unfamiliar foreign lullabies. Bainbridge CM, Bertolo M, Youngers J, Atwood S, Yurdum L, Simson J, Lopez K, Xing F, Martin A, Mehr SA Nature human behaviour 33077883 Nat Hum Behav 2021 Feb
Children infer the behavioral contexts of unfamiliar foreign songs. Hilton CB, Crowley-de Thierry L, Yan R, Martin A, Mehr SA Journal of experimental psychology. General 36222671 J Exp Psychol Gen 2023 Mar
Prices And Cost Sharing For Psychotherapy In Network Versus Out Of Network In The United States. Benson NM, Song Z Health affairs (Project Hope) 32634359 Health Aff (Millwood) 2020 Jul
Changes in Health Care Spending, Use, and Clinical Outcomes After Nonfatal Firearm Injuries Among Survivors and Family Members : A Cohort Study. Song Z, Zubizarreta JR, Giuriato M, Paulos E, Koh KA Annals of internal medicine 35377713 Ann Intern Med 2022 Jun
Physician Practice Pattern Variations in Common Clinical Scenarios Within 5 US Metropolitan Areas. Song Z, Kannan S, Gambrel RJ, Marino M, Vaduganathan M, Clapp MA, Seiglie JA, Bloom PP, Malik AN, Resnick MJ JAMA health forum 35977237 JAMA Health Forum 2022 Jan
Racial and Ethnic Disparities in Hospitalization Outcomes Among Medicare Beneficiaries During the COVID-19 Pandemic. Song Z, Zhang X, Patterson LJ, Barnes CL, Haas DA JAMA health forum 35977303 JAMA Health Forum 2021 Dec
Out-of-Network Laboratory Test Spending, Utilization, and Prices in the US. Song Z, Lillehaugen T, Wallace J JAMA 33904879 JAMA 2021 Apr 27
Health Reform and Utilization of High-Volume Hospitals for Complex Cancer Operations. Loehrer AP, Chang DC, Song Z, Chang GJ Journal of oncology practice 29155612 J Oncol Pract 2018 Jan
Dental Services Use: Medicare Beneficiaries Experience Immediate And Long-Term Reductions After Enrollment. Simon L, Song Z, Barnett ML Health affairs (Project Hope) 36745837 Health Aff (Millwood) 2023 Feb
A Policy Framework for the Growing Influence of Private Equity in Health Care Delivery. Cai C, Song Z JAMA 37052901 JAMA 2023 May 9
Evaluation of Economic and Clinical Outcomes Under Centers for Medicare & Medicaid Services Mandatory Bundled Payments for Joint Replacements. Haas DA, Zhang X, Kaplan RS, Song Z JAMA internal medicine 31157819 JAMA Intern Med 2019 Jul 1
Expansion of Private Equity Involvement in Women's Health Care. Bruch JD, Borsa A, Song Z, Richardson SS JAMA internal medicine 32833005 JAMA Intern Med 2020 Nov 1
Protecting Patients And Society In An Era Of Private Equity Provider Ownership: Challenges And Opportunities For Policy. Cai C, Song Z Health affairs (Project Hope) 38709967 Health Aff (Millwood) 2024 May
Mortality Quadrupled Among Opioid-Driven Hospitalizations, Notably Within Lower-Income And Disabled White Populations. Song Z Health affairs (Project Hope) 29200349 Health Aff (Millwood) 2017 Dec
Baby Boomers and Beds: a Demographic Challenge for the Ages. Song Z, Ferris TG Journal of general internal medicine 29273896 J Gen Intern Med 2018 Mar
Racial Disparities in Patient-Reported Measures of Physician Cultural Competency Among Cancer Survivors in the United States. Butler SS, Winkfield KM, Ahn C, Song Z, Dee EC, Mahal BA, Sanford NN JAMA oncology 31670752 JAMA Oncol 2020 Jan 1
Physician-initiated payment reform: a new path toward value. Gondi S, Ferris TG, Patel KK, Song Z The American journal of managed care 31518092 Am J Manag Care 2019 Sep
Out-Of-Network Spending Mostly Declined In Privately Insured Populations With A Few Notable Exceptions From 2008 To 2016. Song Z, Johnson W, Kennedy K, Biniek JF, Wallace J Health affairs (Project Hope) 32479236 Health Aff (Millwood) 2020 Jun
Implications of Changes in Medicare Payment and Documentation for Primary Care Spending and Time Use. Basu S, Song Z, Phillips RS, Bitton A, Landon BE Journal of general internal medicine 32495087 J Gen Intern Med 2021 Mar
Out-of-Network Spending on Behavioral Health, 2008-2016. Song Z, Lillehaugen T, Busch SH, Benson NM, Wallace J Journal of general internal medicine 31993946 J Gen Intern Med 2021 Jan
Health Care Spending And Use Among People Experiencing Unstable Housing In The Era Of Accountable Care Organizations. Koh KA, Racine M, Gaeta JM, Goldie J, Martin DP, Bock B, Takach M, O'Connell JJ, Song Z Health affairs (Project Hope) 32011951 Health Aff (Millwood) 2020 Feb
Improving Affordability and Equity in Medicare Advantage. Song Z, Basu S Inquiry : a journal of medical care organization, provision and financing 31208262 Inquiry 2019 Jan-Dec
Mortality Before and After Border Wall Construction Along the US-Mexico Border, 1990-2017. Bruch JD, Barin O, Venkataramani AS, Song Z American journal of public health 34197717 Am J Public Health 2021 Sep
Making the Affordable Care Act Marketplace More Affordable. Song Z JAMA health forum 36046713 JAMA Health Forum 2021 May
Firearm Injuries In Children And Adolescents: Health And Economic Consequences Among Survivors And Family Members. Song Z, Zubizarreta JR, Giuriato M, Koh KA, Sacks CA Health affairs (Project Hope) 37931194 Health Aff (Millwood) 2023 Nov
Association of Private Equity Acquisition of Physician Practices With Changes in Health Care Spending and Utilization. Singh Y, Song Z, Polsky D, Bruch JD, Zhu JM JAMA health forum 36218927 JAMA Health Forum 2022 Sep 2
Demographic And Clinical Factors Associated With Long COVID. Song Z, Giuriato M Health affairs (Project Hope) 36877912 Health Aff (Millwood) 2023 Mar
Changes in Out-of-Pocket Costs for US Hospital Admissions Between December and January Every Year. Kannan S, Song Z JAMA health forum 37145689 JAMA Health Forum 2023 May 5
Health Care Utilization among Homeless-Experienced Adults Who Were Seen by a Mobile Addiction Health Clinic in Boston, Massachusetts: A Quasi-Experimental Study. Fine DR, Joyce A, Chang Y, Lewis E, Weinstock K, Wright J, Gaeta J, Song Z, Baggett TP Substance use & misuse 37184078 Subst Use Misuse 2023
Changes in Prescription Drug and Health Care Use Over 9 Years After the Large Drug Price Increase for Colchicine. Ly DP, Giuriato MA, Song Z JAMA internal medicine 37155179 JAMA Intern Med 2023 Jul 1
Changes in use of low-value services during the COVID-19 pandemic. Shahzad M, Song Z, Chernew ME, Fendrick AM The American journal of managed care 36374618 Am J Manag Care 2022 Nov
Characteristics of Private Equity-Owned Hospitals in 2018. Bruch J, Zeltzer D, Song Z Annals of internal medicine 32986485 Ann Intern Med 2021 Feb
Health Care Spending, Utilization, and Quality 8 Years into Global Payment. Song Z, Ji Y, Safran DG, Chernew ME The New England journal of medicine 31314969 N Engl J Med 2019 Jul 18
Moving Beyond the Hospital. McCarthy CP, Vaduganathan M, Song Z Circulation 30571513 Circulation 2018 Nov 13
Type 2 Myocardial Infarction and the Hospital Readmission Reduction Program. McCarthy CP, Vaduganathan M, Singh A, Song Z, Blankstein R, Gaggin HK, Wasfy JH, Januzzi JL Jr Journal of the American College of Cardiology 30165988 J Am Coll Cardiol 2018 Sep 4
Physician Payment Disparities and Access to Services-a Look Across Specialties. Goodson JD, Shahbazi S, Song Z Journal of general internal medicine 31385213 J Gen Intern Med 2019 Nov
The US Affordable Care Act: Reflections and directions at the close of a decade. McIntyre A, Song Z PLoS medicine 30807584 PLoS Med 2019 Feb
Potential Implications of Private Equity Investments in Health Care Delivery. Gondi S, Song Z JAMA 30816912 JAMA 2019 Mar 19
Differences in the Complexity of Office Visits by Physician Specialty: NAMCS 2013-2016. Goodson JD, Shahbazi S, Rao K, Song Z Journal of general internal medicine 32157646 J Gen Intern Med 2020 Jun
Changes in Hospital Income, Use, and Quality Associated With Private Equity Acquisition. Bruch JD, Gondi S, Song Z JAMA internal medicine 32833006 JAMA Intern Med 2020 Nov 1
Taking account of accountable care. Song Z Health services research 34105147 Health Serv Res 2021 Aug
Health Care Spending Slowed After Rhode Island Applied Affordability Standards To Commercial Insurers. Baum A, Song Z, Landon BE, Phillips RS, Bitton A, Basu S Health affairs (Project Hope) 30715981 Health Aff (Millwood) 2019 Feb
Incorporating value into physician payment and patient cost sharing. Song Z, Navathe AS, Emanuel EJ, Volpp KG The American journal of managed care 29553274 Am J Manag Care 2018 Mar
Will Increasing Primary Care Spending Alone Save Money? Song Z, Gondi S JAMA 31415068 JAMA 2019 Oct 8
Geographic Variation in Private Equity Penetration Across Select Office-Based Physician Specialties in the US. Singh Y, Zhu JM, Polsky D, Song Z JAMA health forum 35977319 JAMA Health Forum 2022 Apr
A critical look: Challenges in differentiating human pluripotent stem cells into desired cell types and organoids. Fowler JL, Ang LT, Loh KM Wiley interdisciplinary reviews. Developmental biology 31746148 Wiley Interdiscip Rev Dev Biol 2020 May
Generating human artery and vein cells from pluripotent stem cells highlights the arterial tropism of Nipah and Hendra viruses. Ang LT, Nguyen AT, Liu KJ, Chen A, Xiong X, Curtis M, Martin RM, Raftry BC, Ng CY, Vogel U, Lander A, Lesch BJ, Fowler JL, Holman AR, Chai T, Vijayakumar S, Suchy FP, Nishimura T, Bhadury J, Porteus MH, Nakauchi H, Cheung C, George SC, Red-Horse K, Prescott JB, Loh KM Cell 35738284 Cell 2022 Jul 7
Antibody Conditioning Enables MHC-Mismatched Hematopoietic Stem Cell Transplants and Organ Graft Tolerance. George BM, Kao KS, Kwon HS, Velasco BJ, Poyser J, Chen A, Le AC, Chhabra A, Burnett CE, Cajuste D, Hoover M, Loh KM, Shizuru JA, Weissman IL Cell stem cell 31204177 Cell Stem Cell 2019 Aug 1
Affinity-matured DLL4 ligands as broad-spectrum modulators of Notch signaling. Gonzalez-Perez D, Das S, Antfolk D, Ahsan HS, Medina E, Dundes CE, Jokhai RT, Egan ED, Blacklow SC, Loh KM, Rodriguez PC, Luca VC Nature chemical biology 36050494 Nat Chem Biol 2023 Jan
Dach1 Extends Artery Networks and Protects Against Cardiac Injury. Raftrey B, Williams M, Rios Coronado PE, Fan X, Chang AH, Zhao M, Roth R, Trimm E, Racelis R, D'Amato G, Phansalkar R, Nguyen A, Chai T, Gonzalez KM, Zhang Y, Ang LT, Loh KM, Bernstein D, Red-Horse K Circulation research 34383559 Circ Res 2021 Sep 17
Improving the safety of human pluripotent stem cell therapies using genome-edited orthogonal safeguards. Martin RM, Fowler JL, Cromer MK, Lesch BJ, Ponce E, Uchida N, Nishimura T, Porteus MH, Loh KM Nature communications 32483127 Nat Commun 2020 Jun 1
A stem cell roadmap of ribosome heterogeneity reveals a function for RPL10A in mesoderm production. Genuth NR, Shi Z, Kunimoto K, Hung V, Xu AF, Kerr CH, Tiu GC, Oses-Prieto JA, Salomon-Shulman REA, Axelrod JD, Burlingame AL, Loh KM, Barna M Nature communications 36123354 Nat Commun 2022 Sep 19
Building human artery and vein endothelial cells from pluripotent stem cells, and enduring mysteries surrounding arteriovenous development. Loh KM, Ang LT Seminars in cell & developmental biology 37393122 Semin Cell Dev Biol 2024 Mar 1
A Roadmap for Human Liver Differentiation from Pluripotent Stem Cells. Ang LT, Tan AKY, Autio MI, Goh SH, Choo SH, Lee KL, Tan J, Pan B, Lee JJH, Lum JJ, Lim CYY, Yeo IKX, Wong CJY, Liu M, Oh JLL, Chia CPL, Loh CH, Chen A, Chen Q, Weissman IL, Loh KM, Lim B Cell reports 29466743 Cell Rep 2018 Feb 20
Long-term ex vivo haematopoietic-stem-cell expansion allows nonconditioned transplantation. Wilkinson AC, Ishida R, Kikuchi M, Sudo K, Morita M, Crisostomo RV, Yamamoto R, Loh KM, Nakamura Y, Watanabe M, Nakauchi H, Yamazaki S Nature 31142833 Nature 2019 Jul
Monolayer platform to generate and purify primordial germ-like cells in vitro provides insights into human germline specification. Vijayakumar S, Sala R, Kang G, Chen A, Pablo MA, Adebayo AI, Cipriano A, Fowler JL, Gomes DL, Ang LT, Loh KM, Sebastiano V Nature communications 37709760 Nat Commun 2023 Sep 14
Creating artificial signaling gradients to spatially pattern engineered tissues. Zheng SL, Loh KM Current opinion in biotechnology 36182872 Curr Opin Biotechnol 2022 Dec
Lineage-tracing hematopoietic stem cell origins in vivo to efficiently make human HLF+ HOXA+ hematopoietic progenitors from pluripotent stem cells. Fowler JL, Zheng SL, Nguyen A, Chen A, Xiong X, Chai T, Chen JY, Karigane D, Banuelos AM, Niizuma K, Kayamori K, Nishimura T, Cromer MK, Gonzalez-Perez D, Mason C, Liu DD, Yilmaz L, Miquerol L, Porteus MH, Luca VC, Majeti R, Nakauchi H, Red-Horse K, Weissman IL, Ang LT, Loh KM Developmental cell 38569552 Dev Cell 2024 May 6
DNMT3A(R882H) Is Not Required for Disease Maintenance in Primary Human AML, but Is Associated With Increased Leukemia Stem Cell Frequency. Köhnke T, Karigane D, Hilgart E, Fan AC, Kayamori K, Miyauchi M, Collins CT, Suchy FP, Rangavajhula A, Feng Y, Nakauchi Y, Martinez-Montes E, Fowler JL, Loh KM, Nakauchi H, Koldobskiy MA, Feinberg AP, Majeti R bioRxiv : the preprint server for biology 39553934 bioRxiv 2024 Oct 29
Structure-Based Design with Tag-Based Purification and In-Process Biotinylation Enable Streamlined Development of SARS-CoV-2 Spike Molecular Probes. Zhou T, Teng IT, Olia AS, Cerutti G, Gorman J, Nazzari A, Shi W, Tsybovsky Y, Wang L, Wang S, Zhang B, Zhang Y, Katsamba PS, Petrova Y, Banach BB, Fahad AS, Liu L, Lopez Acevedo SN, Madan B, de Souza MO, Pan X, Wang P, Wolfe JR, Yin M, Ho DD, Phung E, DiPiazza A, Chang L, Abiona O, Corbett KS, DeKosky BJ, Graham BS, Mascola JR, Misasi J, Ruckwardt T, Sullivan NJ, Shapiro L, Kwong PD bioRxiv : the preprint server for biology 32596696 bioRxiv 2020 Jun 23
Potent SARS-CoV-2 neutralizing antibodies directed against spike N-terminal domain target a single supersite. Cerutti G, Guo Y, Zhou T, Gorman J, Lee M, Rapp M, Reddem ER, Yu J, Bahna F, Bimela J, Huang Y, Katsamba PS, Liu L, Nair MS, Rawi R, Olia AS, Wang P, Zhang B, Chuang GY, Ho DD, Sheng Z, Kwong PD, Shapiro L Cell host & microbe 33789084 Cell Host Microbe 2021 May 12
Immortalization and functional screening of natively paired human T cell receptor repertoires. Fahad AS, Chung CY, Lopez Acevedo SN, Boyle N, Madan B, Gutiérrez-González MF, Matus-Nicodemos R, Laflin AD, Ladi RR, Zhou J, Wolfe J, Llewellyn-Lacey S, Koup RA, Douek DC, Balfour HH Jr, Price DA, DeKosky BJ Protein engineering, design & selection : PEDS 35174859 Protein Eng Des Sel 2022 Feb 17
Mutational fitness landscapes reveal genetic and structural improvement pathways for a vaccine-elicited HIV-1 broadly neutralizing antibody. Madan B, Zhang B, Xu K, Chao CW, O'Dell S, Wolfe JR, Chuang GY, Fahad AS, Geng H, Kong R, Louder MK, Nguyen TD, Rawi R, Schön A, Sheng Z, Nimrania R, Wang Y, Zhou T, Lin BC, Doria-Rose NA, Shapiro L, Kwong PD, DeKosky BJ Proceedings of the National Academy of Sciences of the United States of America 33649208 Proc Natl Acad Sci U S A 2021 Mar 9
Optimized Production of Fc Fusion Proteins by Sortase Enzymatic Ligation. Apley KD, Laflin AD, Johnson SN, Batrash N, Griffin JD, Berkland CJ, DeKosky BJ Industrial & engineering chemistry research 38646185 Ind Eng Chem Res 2021 Dec 1
Antibody-directed evolution reveals a mechanism for enhanced neutralization at the HIV-1 fusion peptide site. Banach BB, Pletnev S, Olia AS, Xu K, Zhang B, Rawi R, Bylund T, Doria-Rose NA, Nguyen TD, Fahad AS, Lee M, Lin BC, Liu T, Louder MK, Madan B, McKee K, O'Dell S, Sastry M, Schön A, Bui N, Shen CH, Wolfe JR, Chuang GY, Mascola JR, Kwong PD, DeKosky BJ Nature communications 37989731 Nat Commun 2023 Nov 21
Paired heavy- and light-chain signatures contribute to potent SARS-CoV-2 neutralization in public antibody responses. Banach BB, Cerutti G, Fahad AS, Shen CH, Oliveira De Souza M, Katsamba PS, Tsybovsky Y, Wang P, Nair MS, Huang Y, Francino-Urdániz IM, Steiner PJ, Gutiérrez-González M, Liu L, López Acevedo SN, Nazzari AF, Wolfe JR, Luo Y, Olia AS, Teng IT, Yu J, Zhou T, Reddem ER, Bimela J, Pan X, Madan B, Laflin AD, Nimrania R, Yuen KY, Whitehead TA, Ho DD, Kwong PD, Shapiro L, DeKosky BJ Cell reports 34587480 Cell Rep 2021 Oct 5
Structure-Based Design with Tag-Based Purification and In-Process Biotinylation Enable Streamlined Development of SARS-CoV-2 Spike Molecular Probes. Zhou T, Teng IT, Olia AS, Cerutti G, Gorman J, Nazzari A, Shi W, Tsybovsky Y, Wang L, Wang S, Zhang B, Zhang Y, Katsamba PS, Petrova Y, Banach BB, Fahad AS, Liu L, Lopez Acevedo SN, Madan B, Oliveira de Souza M, Pan X, Wang P, Wolfe JR, Yin M, Ho DD, Phung E, DiPiazza A, Chang LA, Abiona OM, Corbett KS, DeKosky BJ, Graham BS, Mascola JR, Misasi J, Ruckwardt T, Sullivan NJ, Shapiro L, Kwong PD Cell reports 33091382 Cell Rep 2020 Oct 27
The Molecular Mechanisms That Underlie the Immune Biology of Anti-drug Antibody Formation Following Treatment With Monoclonal Antibodies. Vaisman-Mentesh A, Gutierrez-Gonzalez M, DeKosky BJ, Wine Y Frontiers in immunology 33013848 Front Immunol 2020
Optimized single-cell gates for yeast display screening. Pan X, de Souza MO, Figueiras FM, Huang A, Banach BB, Wolfe JR, Pirhanov A, Madan B, DeKosky BJ Protein engineering, design & selection : PEDS 39667035 Protein Eng Des Sel 2025 Jan 10
A molecular trap against COVID-19. DeKosky BJ Science (New York, N.Y.) 32883851 Science 2020 Sep 4
Antibody-dependent enhancement and SARS-CoV-2 vaccines and therapies. Lee WS, Wheatley AK, Kent SJ, DeKosky BJ Nature microbiology 32908214 Nat Microbiol 2020 Oct
The covalent SNAP tag for protein display quantification and low-pH protein engineering. Jin W, Madan B, Mussman BK, Hailemariam AT, Fahad AS, Wolfe JR, Kwon YD, Zhang B, Shapiro L, Kwong PD, DeKosky BJ Journal of biotechnology 32561362 J Biotechnol 2020 Aug 20
VRC34-Antibody Lineage Development Reveals How a Required Rare Mutation Shapes the Maturation of a Broad HIV-Neutralizing Lineage. Shen CH, DeKosky BJ, Guo Y, Xu K, Gu Y, Kilam D, Ko SH, Kong R, Liu K, Louder MK, Ou L, Zhang B, Chao CW, Corcoran MM, Feng E, Huang J, Normandin E, O'Dell S, Ransier A, Rawi R, Sastry M, Schmidt SD, Wang S, Wang Y, Chuang GY, Doria-Rose NA, Lin B, Zhou T, Boritz EA, Connors M, Douek DC, Karlsson Hedestam GB, Sheng Z, Shapiro L, Mascola JR, Kwong PD Cell host & microbe 32130953 Cell Host Microbe 2020 Apr 8
Linking autoantigen properties to mechanisms of immunity. Griffin JD, Song JY, Sestak JO, DeKosky BJ, Berkland CJ Advanced drug delivery reviews 32325104 Adv Drug Deliv Rev 2020
Molecular probes of spike ectodomain and its subdomains for SARS-CoV-2 variants, Alpha through Omicron. Teng IT, Nazzari AF, Choe M, Liu T, Oliveira de Souza M, Petrova Y, Tsybovsky Y, Wang S, Zhang B, Artamonov M, Madan B, Huang A, Lopez Acevedo SN, Pan X, Ruckwardt TJ, DeKosky BJ, Mascola JR, Misasi J, Sullivan NJ, Zhou T, Kwong PD PloS one 35609088 PLoS One 2022
Antibody screening at reduced pH enables preferential selection of potently neutralizing antibodies targeting SARS-CoV-2. Madan B, Reddem ER, Wang P, Casner RG, Nair MS, Huang Y, Fahad AS, de Souza MO, Banach BB, López Acevedo SN, Pan X, Nimrania R, Teng IT, Bahna F, Zhou T, Zhang B, Yin MT, Ho DD, Kwong PD, Shapiro L, DeKosky BJ AIChE journal. American Institute of Chemical Engineers 34898670 AIChE J 2021 Dec
Cell activation-based screening of natively paired human T cell receptor repertoires. Fahad AS, Chung CY, López Acevedo SN, Boyle N, Madan B, Gutiérrez-González MF, Matus-Nicodemos R, Laflin AD, Ladi RR, Zhou J, Wolfe J, Llewellyn-Lacey S, Koup RA, Douek DC, Balfour HH Jr, Price DA, DeKosky BJ Scientific reports 37198258 Sci Rep 2023 May 17
Neutralizing antibody 5-7 defines a distinct site of vulnerability in SARS-CoV-2 spike N-terminal domain. Cerutti G, Guo Y, Wang P, Nair MS, Wang M, Huang Y, Yu J, Liu L, Katsamba PS, Bahna F, Reddem ER, Kwong PD, Ho DD, Sheng Z, Shapiro L Cell reports 34706271 Cell Rep 2021 Nov 2
Structural basis for accommodation of emerging B.1.351 and B.1.1.7 variants by two potent SARS-CoV-2 neutralizing antibodies. Cerutti G, Rapp M, Guo Y, Bahna F, Bimela J, Reddem ER, Yu J, Wang P, Liu L, Huang Y, Ho DD, Kwong PD, Sheng Z, Shapiro L Structure (London, England : 1993) 34111408 Structure 2021 Jul 1
Ultrasonically-guided flow focusing generates precise emulsion droplets for high-throughput single cell analyses. Lagerman CE, López Acevedo SN, Fahad AS, Hailemariam AT, Madan B, DeKosky BJ Journal of bioscience and bioengineering 30904454 J Biosci Bioeng 2019 Aug
Functional interrogation and mining of natively paired human V(H):V(L) antibody repertoires. Wang B, DeKosky BJ, Timm MR, Lee J, Normandin E, Misasi J, Kong R, McDaniel JR, Delidakis G, Leigh KE, Niezold T, Choi CW, Viox EG, Fahad A, Cagigi A, Ploquin A, Leung K, Yang ES, Kong WP, Voss WN, Schmidt AG, Moody MA, Ambrozak DR, Henry AR, Laboune F, Ledgerwood JE, Graham BS, Connors M, Douek DC, Sullivan NJ, Ellington AD, Mascola JR, Georgiou G Nature biotechnology 29309060 Nat Biotechnol 2018 Feb
Highly protective antimalarial antibodies via precision library generation and yeast display screening. Banach BB, Tripathi P, Da Silva Pereira L, Gorman J, Nguyen TD, Dillon M, Fahad AS, Kiyuka PK, Madan B, Wolfe JR, Bonilla B, Flynn B, Francica JR, Hurlburt NK, Kisalu NK, Liu T, Ou L, Rawi R, Schön A, Shen CH, Teng IT, Zhang B, Pancera M, Idris AH, Seder RA, Kwong PD, DeKosky BJ The Journal of experimental medicine 35736810 J Exp Med 2022 Aug 1
Quality Control: Chain Pairing Precision and Monitoring of Cross-Sample Contamination: A Method by the AIRR Community. Chung CY, Gutiérrez-González M, López Acevedo SN, Fahad AS, DeKosky BJ, AIRR Community Methods in molecular biology (Clifton, N.J.) 35622337 Methods Mol Biol 2022
Functional Profiling of Antibody Immune Repertoires in Convalescent Zika Virus Disease Patients. Fahad AS, Timm MR, Madan B, Burgomaster KE, Dowd KA, Normandin E, Gutiérrez-González MF, Pennington JM, De Souza MO, Henry AR, Laboune F, Wang L, Ambrozak DR, Gordon IJ, Douek DC, Ledgerwood JE, Graham BS, Castilho LR, Pierson TC, Mascola JR, DeKosky BJ Frontiers in immunology 33732238 Front Immunol 2021
Structure-Based Design with Tag-Based Purification and In-Process Biotinylation Enable Streamlined Development of SARS-CoV-2 Spike Molecular Probes. Zhou T, Teng IT, Olia AS, Cerutti G, Gorman J, Nazzari A, Shi W, Tsybovsky Y, Wang L, Wang S, Zhang B, Zhang Y, Katsamba PS, Petrova Y, Banach BB, Fahad AS, Liu L, Acevedo SNL, Madan B, de Souza MO, Pan X, Wang P, Wolfe JR, Yin M, Ho DD, Phung E, DiPiazza A, Chang L, Abiona O, Corbett KS, DeKosky BJ, Graham BS, Mascola JR, Misasi J, Ruckwardt T, Sullivan NJ, Shapiro L, Kwong PD SSRN 32742241 SSRN 2020 Jul 21
Antibody-guided structure-based vaccines. Kwong PD, DeKosky BJ, Ulmer JB Seminars in immunology 33246736 Semin Immunol 2020 Aug
Tetrameric Fluorescent Antigen Arrays for Single-Step Identification of Antigen-Specific B Cells. Apley KD, Griffin JD, Johnson SN, Berkland CJ, DeKosky BJ Journal of visualized experiments : JoVE 33165322 J Vis Exp 2020 Oct 20
Bioinformatic Analysis of Natively Paired VH:VL Antibody Repertoires for Antibody Discovery. Fahad AS, Madan B, DeKosky BJ Methods in molecular biology (Clifton, N.J.) 36346608 Methods Mol Biol 2023
Mapping monoclonal anti-SARS-CoV-2 antibody repertoires against diverse coronavirus antigens. de Souza MO, Madan B, Teng IT, Huang A, Liu L, Fahad AS, Lopez Acevedo SN, Pan X, Sastry M, Gutierrez-Gonzalez M, Yin MT, Zhou T, Ho DD, Kwong PD, DeKosky BJ Frontiers in immunology 36119018 Front Immunol 2022
Transformation of Our Understanding of Breathing Control by Molecular Tools. Yackle K Annual review of physiology 36323001 Annu Rev Physiol 2023 Feb 10
ß-arrestin 2 germline knockout does not attenuate opioid respiratory depression. Bachmutsky I, Wei XP, Durand A, Yackle K eLife 34002697 Elife 2021 May 18
Opioids depress breathing through two small brainstem sites. Bachmutsky I, Wei XP, Kish E, Yackle K eLife 32073401 Elife 2020 Feb 19
A novel reticular node in the brainstem synchronizes neonatal mouse crying with breathing. Wei XP, Collie M, Dempsey B, Fortin G, Yackle K Neuron 34998469 Neuron 2022 Feb 16
Cephalopod retinal development shows vertebrate-like mechanisms of neurogenesis. Napoli FR, Daly CM, Neal S, McCulloch KJ, Zaloga AR, Liu A, Koenig KM Current biology : CB 36356573 Curr Biol 2022 Dec 5
Advances in Chromatin and Chromosome Research: Perspectives from Multiple Fields. Agbleke AA, Amitai A, Buenrostro JD, Chakrabarti A, Chu L, Hansen AS, Koenig KM, Labade AS, Liu S, Nozaki T, Ovchinnikov S, Seeber A, Shaban HA, Spille JH, Stephens AD, Su JH, Wadduwage D Molecular cell 32768408 Mol Cell 2020 Sep 17
Evolution and development of complex eyes: a celebration of diversity. Koenig KM, Gross JM Development (Cambridge, England) 33051250 Development 2020 Oct 13
Krüppel-like factor/specificity protein evolution in the Spiralia and the implications for cephalopod visual system novelties. McCulloch KJ, Koenig KM Proceedings. Biological sciences 33081641 Proc Biol Sci 2020 Oct 28
Nematostella vectensis exemplifies the exceptional expansion and diversity of opsins in the eyeless Hexacorallia. McCulloch KJ, Babonis LS, Liu A, Daly CM, Martindale MQ, Koenig KM EvoDevo 37735470 Evodevo 2023 Sep 21
Highly Efficient Knockout of a Squid Pigmentation Gene. Crawford K, Diaz Quiroz JF, Koenig KM, Ahuja N, Albertin CB, Rosenthal JJC Current biology : CB 32735817 Curr Biol 2020 Sep 7
Co-option of the limb patterning program in cephalopod eye development. Neal S, McCulloch KJ, Napoli FR, Daly CM, Coleman JH, Koenig KM BMC biology 34983491 BMC Biol 2022 Jan 5
Reactivating hippocampal-mediated memories during reconsolidation to disrupt fear. Grella SL, Fortin AH, Ruesch E, Bladon JH, Reynolds LF, Gross A, Shpokayte M, Cincotta C, Zaki Y, Ramirez S Nature communications 36096993 Nat Commun 2022 Sep 12
From Engrams to Pathologies of the Brain. Denny CA, Lebois E, Ramirez S Frontiers in neural circuits 28439228 Front Neural Circuits 2017
Theta-phase-specific modulation of dentate gyrus memory neurons. Rahsepar B, Norman JF, Noueihed J, Lahner B, Quick MH, Ghaemi K, Pandya A, Fernandez FR, Ramirez S, White JA eLife 37401757 Elife 2023 Jul 4
Hippocampal Engrams Generate Variable Behavioral Responses and Brain-Wide Network States. Dorst KE, Senne RA, Diep AH, de Boer AR, Suthard RL, Leblanc H, Ruesch EA, Pyo AY, Skelton S, Carstensen LC, Malmberg S, McKissick OP, Bladon JH, Ramirez S The Journal of neuroscience : the official journal of the Society for Neuroscience 38050098 J Neurosci 2024 Jan 10
Chronic activation of a negative engram induces behavioral and cellular abnormalities. Jellinger AL, Suthard RL, Yuan B, Surets M, Ruesch EA, Caban AJ, Liu S, Shpokayte M, Ramirez S eLife 38990919 Elife 2024 Jul 11
Erasable Hippocampal Neural Signatures Predict Memory Discrimination. Kinsky NR, Orlin DJ, Ruesch EA, Kim B, Coello S, Diba K, Ramirez S bioRxiv : the preprint server for biology 36778486 bioRxiv 2024 Dec 19
Hippocampus and amygdala fear memory engrams re-emerge after contextual fear relapse. Zaki Y, Mau W, Cincotta C, Monasterio A, Odom E, Doucette E, Grella SL, Merfeld E, Shpokayte M, Ramirez S Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology 35941286 Neuropsychopharmacology 2022 Oct
Social behavior in mice following chronic optogenetic stimulation of hippocampal engrams. Doucette E, Merfeld E, Leblanc H, Monasterio A, Cincotta C, Grella SL, Logan J, Ramirez S Neurobiology of learning and memory 33164892 Neurobiol Learn Mem 2020 Dec
Linking Social Cognition to Learning and Memory. Leblanc H, Ramirez S The Journal of neuroscience : the official journal of the Society for Neuroscience 33177112 J Neurosci 2020 Nov 11
Basolateral Amygdala Astrocytes Are Engaged by the Acquisition and Expression of a Contextual Fear Memory. Suthard RL, Senne RA, Buzharsky MD, Pyo AY, Dorst KE, Diep AH, Cole RH, Ramirez S The Journal of neuroscience : the official journal of the Society for Neuroscience 37268419 J Neurosci 2023 Jul 5
Prelimbic cortex ensembles promote appetitive learning-associated behavior. Surets M, Caban-Murillo A, Ramirez S Learning & memory (Cold Spring Harbor, N.Y.) 38408863 Learn Mem 2024 Jan-Feb
Chronic Gq activation of ventral hippocampal neurons and astrocytes differentially affects memory and behavior. Suthard RL, Jellinger AL, Surets M, Shpokayte M, Pyo AY, Buzharsky MD, Senne RA, Dorst K, Leblanc H, Ramirez S Neurobiology of aging 36801699 Neurobiol Aging 2023 May
Route-dependent spatial engram tagging in mouse dentate gyrus. Wilmerding LK, Kondratyev I, Ramirez S, Hasselmo ME Neurobiology of learning and memory 36822466 Neurobiol Learn Mem 2023 Apr
Hippocampal cells segregate positive and negative engrams. Shpokayte M, McKissick O, Guan X, Yuan B, Rahsepar B, Fernandez FR, Ruesch E, Grella SL, White JA, Liu XS, Ramirez S Communications biology 36163262 Commun Biol 2022 Sep 26
Social reactivation of fear engrams enhances memory recall. Finkelstein AB, Leblanc H, Cole RH, Gallerani T, Vieira A, Zaki Y, Ramirez S Proceedings of the National Academy of Sciences of the United States of America 35286206 Proc Natl Acad Sci U S A 2022 Mar 22
Artificially Enhancing and Suppressing Hippocampus-Mediated Memories. Chen BK, Murawski NJ, Cincotta C, McKissick O, Finkelstein A, Hamidi AB, Merfeld E, Doucette E, Grella SL, Shpokayte M, Zaki Y, Fortin A, Ramirez S Current biology : CB 31130452 Curr Biol 2019 Jun 3
Chronic activation of fear engrams induces extinction-like behavior in ethanol-exposed mice. Cincotta C, Murawski NJ, Grella SL, McKissick O, Doucette E, Ramirez S Hippocampus 32946184 Hippocampus 2021 Jan
Odor modulates the temporal dynamics of fear memory consolidation. Grella SL, Fortin AH, McKissick O, Leblanc H, Ramirez S Learning & memory (Cold Spring Harbor, N.Y.) 32179657 Learn Mem 2020 Apr
Ensemble-specific deficit in neuronal intrinsic excitability in aged mice. Chen L, Francisco TR, Baggetta AM, Zaki Y, Ramirez S, Clem RL, Shuman T, Cai DJ Neurobiology of aging 36652783 Neurobiol Aging 2023 Mar
Centring sexual and reproductive health and justice in the global COVID-19 response. Hall KS, Samari G, Garbers S, Casey SE, Diallo DD, Orcutt M, Moresky RT, Martinez ME, McGovern T Lancet (London, England) 32278371 Lancet 2020 Apr 11
Social-distancing fatigue: Evidence from real-time crowd-sourced traffic data. Shearston JA, Martinez ME, Nunez Y, Hilpert M The Science of the total environment 34153749 Sci Total Environ 2021 Oct 20
Daylight saving time and circadian rhythms in the neuro-endocrine-immune system: impact on cardiovascular health. Tarquini R, Carbone A, Martinez M, Mazzoccoli G Internal and emergency medicine 30488154 Intern Emerg Med 2019 Jan
The calendar of epidemics: Seasonal cycles of infectious diseases. Martinez ME PLoS pathogens 30408114 PLoS Pathog 2018 Nov
Socioeconomic Disparities in Subway Use and COVID-19 Outcomes in New York City. Sy KTL, Martinez ME, Rader B, White LF American journal of epidemiology 33372209 Am J Epidemiol 2021 Jul 1
Guidelines for Modeling and Reporting Health Effects of Climate Change Mitigation Actions. Hess JJ, Ranadive N, Boyer C, Aleksandrowicz L, Anenberg SC, Aunan K, Belesova K, Bell ML, Bickersteth S, Bowen K, Burden M, Campbell-Lendrum D, Carlton E, Cissé G, Cohen F, Dai H, Dangour AD, Dasgupta P, Frumkin H, Gong P, Gould RJ, Haines A, Hales S, Hamilton I, Hasegawa T, Hashizume M, Honda Y, Horton DE, Karambelas A, Kim H, Kim SE, Kinney PL, Kone I, Knowlton K, Lelieveld J, Limaye VS, Liu Q, Madaniyazi L, Martinez ME, Mauzerall DL, Milner J, Neville T, Nieuwenhuijsen M, Pachauri S, Perera F, Pineo H, Remais JV, Saari RK, Sampedro J, Scheelbeek P, Schwartz J, Shindell D, Shyamsundar P, Taylor TJ, Tonne C, Van Vuuren D, Wang C, Watts N, West JJ, Wilkinson P, Wood SA, Woodcock J, Woodward A, Xie Y, Zhang Y, Ebi KL Environmental health perspectives 33170741 Environ Health Perspect 2020 Nov
Circadian Rhythms in Environmental Health Sciences. Leung JM, Martinez ME Current environmental health reports 32662059 Curr Environ Health Rep 2020 Sep
Identifying optimal vaccination scenarios to reduce varicella zoster virus transmission and reactivation. Bakker KM, Eisenberg MC, Woods RJ, Martinez ME BMC medicine 36209074 BMC Med 2022 Oct 8
Drivers of Infectious Disease Seasonality: Potential Implications for COVID-19. Kronfeld-Schor N, Stevenson TJ, Nickbakhsh S, Schernhammer ES, Dopico XC, Dayan T, Martinez M, Helm B Journal of biological rhythms 33491541 J Biol Rhythms 2021 Feb
Socioeconomic disparities in subway use and COVID-19 outcomes in New York City. Sy KTL, Martinez ME, Rader B, White LF medRxiv : the preprint server for health sciences 32511568 medRxiv 2020 May 30
Cellular and transcriptional diversity over the course of human lactation. Nyquist SK, Gao P, Haining TKJ, Retchin MR, Golan Y, Drake RS, Kolb K, Mead BE, Ahituv N, Martinez ME, Shalek AK, Berger B, Goods BA Proceedings of the National Academy of Sciences of the United States of America 35377806 Proc Natl Acad Sci U S A 2022 Apr 12
Rescuing Troves of Hidden Ecological Data to Tackle Emerging Mosquito-Borne Diseases. Rund SSC, Moise IK, Beier JC, Martinez ME Journal of the American Mosquito Control Association 31442186 J Am Mosq Control Assoc 2019 Mar
Characterizing the modern light environment and its influence on circadian rhythms. Khodasevich D, Tsui S, Keung D, Skene DJ, Revell V, Martinez ME Proceedings. Biological sciences 34284625 Proc Biol Sci 2021 Jul 28
Benefits and Challenges in Using Seroprevalence Data to Inform Models for Measles and Rubella Elimination. Winter AK, Martinez ME, Cutts FT, Moss WJ, Ferrari MJ, McKee A, Lessler J, Hayford K, Wallinga J, Metcalf CJE The Journal of infectious diseases 29562334 J Infect Dis 2018 Jul 2
CopyCatchers are versatile active genetic elements that detect and quantify inter-homolog somatic gene conversion. Li Z, Marcel N, Devkota S, Auradkar A, Hedrick SM, Gantz VM, Bier E Nature communications 33976171 Nat Commun 2021 May 11
CRISPR-based gene drives generate super-Mendelian inheritance in the disease vector Culex quinquefasciatus. Harvey-Samuel T, Feng X, Okamoto EM, Purusothaman DK, Leftwich PT, Alphey L, Gantz VM bioRxiv : the preprint server for biology 37398284 bioRxiv 2023 Jun 12
A nickase Cas9 gene-drive system promotes super-Mendelian inheritance in Drosophila. López Del Amo V, Juste SS, Gantz VM Cell reports 35613590 Cell Rep 2022 May 24
A transcomplementing gene drive provides a flexible platform for laboratory investigation and potential field deployment. López Del Amo V, Bishop AL, Sánchez C HM, Bennett JB, Feng X, Marshall JM, Bier E, Gantz VM Nature communications 31953404 Nat Commun 2020 Jan 17
Efficient population modification gene-drive rescue system in the malaria mosquito Anopheles stephensi. Adolfi A, Gantz VM, Jasinskiene N, Lee HF, Hwang K, Terradas G, Bulger EA, Ramaiah A, Bennett JB, Emerson JJ, Marshall JM, Bier E, James AA Nature communications 33144570 Nat Commun 2020 Nov 3
Efficient allelic-drive in Drosophila. Guichard A, Haque T, Bobik M, Xu XS, Klanseck C, Kushwah RBS, Berni M, Kaduskar B, Gantz VM, Bier E Nature communications 30967548 Nat Commun 2019 Apr 9
Beyond the eye: Kynurenine pathway impairment causes midgut homeostasis dysfunction and survival and reproductive costs in blood-feeding mosquitoes. Bottino-Rojas V, Ferreira-Almeida I, Nunes RD, Feng X, Pham TB, Kelsey A, Carballar-Lejarazú R, Gantz V, Oliveira PL, James AA Insect biochemistry and molecular biology 34999199 Insect Biochem Mol Biol 2022 Mar
CRISPR-based gene drives generate super-Mendelian inheritance in the disease vector Culex quinquefasciatus. Harvey-Samuel T, Feng X, Okamoto EM, Purusothaman DK, Leftwich PT, Alphey L, Gantz VM Nature communications 37985762 Nat Commun 2023 Nov 20
Small-Molecule Control of Super-Mendelian Inheritance in Gene Drives. López Del Amo V, Leger BS, Cox KJ, Gill S, Bishop AL, Scanlon GD, Walker JA, Gantz VM, Choudhary A Cell reports 32610142 Cell Rep 2020 Jun 30
Optimized CRISPR tools and site-directed transgenesis towards gene drive development in Culex quinquefasciatus mosquitoes. Feng X, López Del Amo V, Mameli E, Lee M, Bishop AL, Perrimon N, Gantz VM Nature communications 34017003 Nat Commun 2021 May 20
Core commitments for field trials of gene drive organisms. Long KC, Alphey L, Annas GJ, Bloss CS, Campbell KJ, Champer J, Chen CH, Choudhary A, Church GM, Collins JP, Cooper KL, Delborne JA, Edwards OR, Emerson CI, Esvelt K, Evans SW, Friedman RM, Gantz VM, Gould F, Hartley S, Heitman E, Hemingway J, Kanuka H, Kuzma J, Lavery JV, Lee Y, Lorenzen M, Lunshof JE, Marshall JM, Messer PW, Montell C, Oye KA, Palmer MJ, Papathanos PA, Paradkar PN, Piaggio AJ, Rasgon JL, Rašić G, Rudenko L, Saah JR, Scott MJ, Sutton JT, Vorsino AE, Akbari OS Science (New York, N.Y.) 33335055 Science 2020 Dec 18
Targeting double-strand break indel byproducts with secondary guide RNAs improves Cas9 HDR-mediated genome editing efficiencies. Bodai Z, Bishop AL, Gantz VM, Komor AC Nature communications 35534455 Nat Commun 2022 May 9
Double-tap gene drive uses iterative genome targeting to help overcome resistance alleles. Bishop AL, López Del Amo V, Okamoto EM, Bodai Z, Komor AC, Gantz VM Nature communications 35534475 Nat Commun 2022 May 9
Active Genetic Neutralizing Elements for Halting or Deleting Gene Drives. Xu XS, Bulger EA, Gantz VM, Klanseck C, Heimler SR, Auradkar A, Bennett JB, Miller LA, Leahy S, Juste SS, Buchman A, Akbari OS, Marshall JM, Bier E Molecular cell 32949493 Mol Cell 2020 Oct 15
Evaluation of Gene Knockouts by CRISPR as Potential Targets for the Genetic Engineering of the Mosquito Culex quinquefasciatus. Feng X, Kambic L, Nishimoto JHK, Reed FA, Denton JA, Sutton JT, Gantz VM The CRISPR journal 34280034 CRISPR J 2021 Aug
Super-Mendelian inheritance mediated by CRISPR-Cas9 in the female mouse germline. Grunwald HA, Gantz VM, Poplawski G, Xu XS, Bier E, Cooper KL Nature 30675057 Nature 2019 Feb
Gene editing technologies and applications for insects. Gantz VM, Akbari OS Current opinion in insect science 30551769 Curr Opin Insect Sci 2018 Aug
CRISPR/Cas9 and active genetics-based trans-species replacement of the endogenous Drosophila kni-L2 CRM reveals unexpected complexity. Xu XS, Gantz VM, Siomava N, Bier E eLife 29274230 Elife 2017 Dec 23
Assessment of a Split Homing Based Gene Drive for Efficient Knockout of Multiple Genes. Kandul NP, Liu J, Buchman A, Gantz VM, Bier E, Akbari OS G3 (Bethesda, Md.) 31882406 G3 (Bethesda) 2020 Feb 6
Advances in the Pathomechanisms of Delayed Drug Hypersensitivity. Wang CW, Divito SJ, Chung WH, Hung SI Immunology and allergy clinics of North America 35469623 Immunol Allergy Clin North Am 2022 May
Updates and Insights in the Diagnosis and Management of DRESS Syndrome. Schunkert EM, Divito SJ Current dermatology reports 34777921 Curr Dermatol Rep 2021
Survival of tissue-resident memory T cells requires exogenous lipid uptake and metabolism. Pan Y, Tian T, Park CO, Lofftus SY, Mei S, Liu X, Luo C, O'Malley JT, Gehad A, Teague JE, Divito SJ, Fuhlbrigge R, Puigserver P, Krueger JG, Hotamisligil GS, Clark RA, Kupper TS Nature 28219080 Nature 2017 Mar 9
Assessment of Need for Improved Identification of a Culprit Drug in Stevens-Johnson Syndrome/Toxic Epidermal Necrolysis. Li DJ, Velasquez GA, Romar GA, Schunkert EM, Foreman RK, Divito SJ JAMA dermatology 37342052 JAMA Dermatol 2023 Aug 1
Stevens-Johnson Syndrome and Toxic Epidermal Necrolysis: Associations, Outcomes, and Pathobiology-Thirty Years of Progress but Still Much to Be Done. Stern RS, Divito SJ The Journal of investigative dermatology 28411832 J Invest Dermatol 2017 May
Implementation of Genetic Screening to Prevent Severe Cutaneous Adverse Drug Reactions Is Crucial-Rebuttal From the Devil's Antagonist-Reply. Divito SJ JAMA dermatology 31851296 JAMA Dermatol 2020 Feb 1
Stevens-Johnson Syndrome and Toxic Epidermal Necrolysis-Coordinating Research Priorities to Move the Field Forward. Phillips EJ, Bouchard CS, Divito SJ JAMA dermatology 35353140 JAMA Dermatol 2022 Jun 1
Cross-Sectional Study Evaluating Skin, Hair, Nail, and Bone Disease in Patients with Focal Dermal Hypoplasia. Gunasekera NS, Divito JK, Kupper TS, Huang JT, Divito SJ Pediatric dermatology 28025844 Pediatr Dermatol 2017 Mar
Physical and mental health impact of Stevens-Johnson syndrome/toxic epidermal necrolysis and post-hospital discharge care: Identifying practice gaps. Coromilas AJ, Divito SJ, Phillips EJ, Micheletti RG JAAD international 36941915 JAAD Int 2023 Jun
HIV-Associated Immune Dysregulation in the Skin: A Crucible for Exaggerated Inflammation and Hypersensitivity. Chimbetete T, Buck C, Choshi P, Selim R, Pedretti S, Divito SJ, Phillips EJ, Lehloenya R, Peter J The Journal of investigative dermatology 36549954 J Invest Dermatol 2023 Mar
Screening HLA to Prevent Severe Drug Reactions-A Devil's Advocate Perspective. Divito SJ JAMA dermatology 30916720 JAMA Dermatol 2019 Jun 1
Skin Resident Memory T Cells May Play Critical Role in Delayed-Type Drug Hypersensitivity Reactions. Schunkert EM, Shah PN, Divito SJ Frontiers in immunology 34497600 Front Immunol 2021
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Method of Generating Tolerogenic Maturation-Resistant Dendritic Cells and Testing for Their Immune-Regulatory Functions In Vivo in the Context of Transplantation. Divito SJ, Morelli AE Methods in molecular biology (Clifton, N.J.) 30649773 Methods Mol Biol 2019
High-throughput sequencing of the T cell receptor β gene identifies aggressive early-stage mycosis fungoides. de Masson A, O'Malley JT, Elco CP, Garcia SS, Divito SJ, Lowry EL, Tawa M, Fisher DC, Devlin PM, Teague JE, Leboeuf NR, Kirsch IR, Robins H, Clark RA, Kupper TS Science translational medicine 29743350 Sci Transl Med 2018 May 9
Peripheral host T cells survive hematopoietic stem cell transplantation and promote graft-versus-host disease. Divito SJ, Aasebø AT, Matos TR, Hsieh PC, Collin M, Elco CP, O'Malley JT, Bækkevold ES, Reims H, Gedde-Dahl T, Hagerstrom M, Hilaire J, Lian JW, Milford EL, Pinkus GS, Ho VT, Soiffer RJ, Kim HT, Mihm MC, Ritz J, Guleria I, Cutler CS, Clark RA, Jahnsen FL, Kupper TS The Journal of clinical investigation 32516138 J Clin Invest 2020 Sep 1
SJS/TEN 2019: From science to translation. Chang WC, Abe R, Anderson P, Anderson W, Ardern-Jones MR, Beachkofsky TM, Bellón T, Biala AK, Bouchard C, Cavalleri GL, Chapman N, Chodosh J, Choi HK, Cibotti RR, Divito SJ, Dewar K, Dehaeck U, Etminan M, Forbes D, Fuchs E, Goldman JL, Holmes JH 4th, Hope EA, Hung SI, Hsieh CL, Iovieno A, Jagdeo J, Kim MK, Koelle DM, Lacouture ME, Le Pallec S, Lehloenya RJ, Lim R, Lowe A, McCawley J, McCawley J, Micheletti RG, Mockenhaupt M, Niemeyer K, Norcross MA, Oboh D, Olteanu C, Pasieka HB, Peter J, Pirmohamed M, Rieder M, Saeed HN, Shear NH, Shieh C, Straus S, Sukasem C, Sung C, Trubiano JA, Tsou SY, Ueta M, Volpi S, Wan C, Wang H, Wang ZQ, Weintraub J, Whale C, Wheatley LM, Whyte-Croasdaile S, Williams KB, Wright G, Yeung SN, Zhou L, Chung WH, Phillips EJ, Carleton BC Journal of dermatological science 32192826 J Dermatol Sci 2020 Apr
Histologic features of graft-versus-host disease-associated angiomatosis: Insights into pathophysiology and treatment. Li DJ, Romar GA, Hsieh PC, Wells M, Foreman RK, Lian CG, Divito SJ Journal of the American Academy of Dermatology 31923444 J Am Acad Dermatol 2020 Sep
Systemic and skin-limited delayed-type drug hypersensitivity reactions associate with distinct resident and recruited T cell subsets. Shah PN, Romar GA, Manukyan A, Ko WC, Hsieh PC, Velasquez GA, Schunkert EM, Fu X, Guleria I, Bronson RT, Wei K, Waldman AH, Vleugels FR, Liang MG, Giobbie-Hurder A, Mostaghimi A, Schmidt BA, Barrera V, Foreman RK, Garber M, Divito SJ The Journal of clinical investigation 39042477 J Clin Invest 2024 Jul 23
Diverse Functional Autoantibodies in Patients with COVID-19. Wang EY, Mao T, Klein J, Dai Y, Huck JD, Liu F, Zheng NS, Zhou T, Israelow B, Wong P, Lucas C, Silva J, Oh JE, Song E, Perotti ES, Fischer S, Campbell M, Fournier JB, Wyllie AL, Vogels CBF, Ott IM, Kalinich CC, Petrone ME, Watkins AE, Yale IMPACT Team, Cruz CD, Farhadian SF, Schulz WL, Grubaugh ND, Ko AI, Iwasaki A, Ring AM medRxiv : the preprint server for health sciences 33330894 medRxiv 2021 Feb 1
IL-18BP mediates the balance between protective and pathological immune responses to Toxoplasma gondii. Clark JT, Weizman OE, Aldridge DL, Shallberg LA, Eberhard J, Lanzar Z, Wasche D, Huck JD, Zhou T, Ring AM, Hunter CA Cell reports 36827187 Cell Rep 2023 Mar 28
Yeast surface display platform for rapid discovery of conformationally selective nanobodies. McMahon C, Baier AS, Pascolutti R, Wegrecki M, Zheng S, Ong JX, Erlandson SC, Hilger D, Rasmussen SGF, Ring AM, Manglik A, Kruse AC Nature structural & molecular biology 29434346 Nat Struct Mol Biol 2018 Mar
IL-18BP is a secreted immune checkpoint and barrier to IL-18 immunotherapy. Zhou T, Damsky W, Weizman OE, McGeary MK, Hartmann KP, Rosen CE, Fischer S, Jackson R, Flavell RA, Wang J, Sanmamed MF, Bosenberg MW, Ring AM Nature 32581358 Nature 2020 Jul
High-throughput identification of autoantibodies that target the human exoproteome. Wang EY, Dai Y, Rosen CE, Schmitt MM, Dong MX, Ferré EMN, Liu F, Yang Y, González-Hernández JA, Meffre E, Hinchcliff M, Koumpouras F, Lionakis MS, Ring AM Cell reports methods 35360706 Cell Rep Methods 2022 Feb 28
Diverse functional autoantibodies in patients with COVID-19. Wang EY, Mao T, Klein J, Dai Y, Huck JD, Jaycox JR, Liu F, Zhou T, Israelow B, Wong P, Coppi A, Lucas C, Silva J, Oh JE, Song E, Perotti ES, Zheng NS, Fischer S, Campbell M, Fournier JB, Wyllie AL, Vogels CBF, Ott IM, Kalinich CC, Petrone ME, Watkins AE, Yale IMPACT Team, Dela Cruz C, Farhadian SF, Schulz WL, Ma S, Grubaugh ND, Ko AI, Iwasaki A, Ring AM Nature 34010947 Nature 2021 Jul
Transferrin receptor targeting by de novo sheet extension. Sahtoe DD, Coscia A, Mustafaoglu N, Miller LM, Olal D, Vulovic I, Yu TY, Goreshnik I, Lin YR, Clark L, Busch F, Stewart L, Wysocki VH, Ingber DE, Abraham J, Baker D Proceedings of the National Academy of Sciences of the United States of America 33879614 Proc Natl Acad Sci U S A 2021 Apr 27
Vaccine-elicited receptor-binding site antibodies neutralize two New World hemorrhagic fever arenaviruses. Clark LE, Mahmutovic S, Raymond DD, Dilanyan T, Koma T, Manning JT, Shankar S, Levis SC, Briggiler AM, Enria DA, Wucherpfennig KW, Paessler S, Abraham J Nature communications 29760382 Nat Commun 2018 May 14
TOR dynamically regulates plant cell-cell transport. Brunkard JO, Xu M, Scarpin MR, Chatterjee S, Shemyakina EA, Goodman HM, Zambryski P Proceedings of the National Academy of Sciences of the United States of America 32051250 Proc Natl Acad Sci U S A 2020 Mar 3
Translating across kingdoms: target of rapamycin promotes protein synthesis through conserved and divergent pathways in plants. Scarpin MR, Simmons CH, Brunkard JO Journal of experimental botany 35770874 J Exp Bot 2022 Nov 15
LncRNA gets into the balancing act. Li F, Brunkard JO, Baker B Cell host & microbe 35952640 Cell Host Microbe 2022 Aug 10
Quantifying Plasmodesmatal Transport with an Improved GFP Movement Assay. Horner W, Brunkard JO Methods in molecular biology (Clifton, N.J.) 35349148 Methods Mol Biol 2022
Light regulates alternative splicing outcomes via the TOR kinase pathway. Riegler S, Servi L, Scarpin MR, Godoy Herz MA, Kubaczka MG, Venhuizen P, Meyer C, Brunkard JO, Kalyna M, Barta A, Petrillo E Cell reports 34496244 Cell Rep 2021 Sep 7
Terminal ear 1 and phytochromes B1/B2 regulate maize leaf initiation independently. Busche M, Hake S, Brunkard JO Genetics 36495288 Genetics 2023 Feb 9
Ties that bind: the integration of plastid signalling pathways in plant cell metabolism. Brunkard JO, Burch-Smith TM Essays in biochemistry 29563221 Essays Biochem 2018 Apr 13
Exaptive Evolution of Target of Rapamycin Signaling in Multicellular Eukaryotes. Brunkard JO Developmental cell 32649861 Dev Cell 2020 Jul 20
Cytokinins Stimulate Plasmodesmatal Transport in Leaves. Horner W, Brunkard JO Frontiers in plant science 34135930 Front Plant Sci 2021
An updated nomenclature for plant ribosomal protein genes. Scarpin MR, Busche M, Martinez RE, Harper LC, Reiser L, Szakonyi D, Merchante C, Lan T, Xiong W, Mo B, Tang G, Chen X, Bailey-Serres J, Browning KS, Brunkard JO The Plant cell 36423343 Plant Cell 2023 Feb 20
Liguleless narrow and narrow odd dwarf act in overlapping pathways to regulate maize development and metabolism. Abraham-Juárez MJ, Busche M, Anderson AA, Lunde C, Winders J, Christensen SA, Hunter CT, Hake S, Brunkard JO The Plant journal : for cell and molecular biology 36164819 Plant J 2022 Nov
The Second Site Modifier, Sympathy for the ligule, Encodes a Homolog of Arabidopsis ENHANCED DISEASE RESISTANCE4 and Rescues the Liguleless narrow Maize Mutant. Anderson A, St Aubin B, Abraham-Juárez MJ, Leiboff S, Shen Z, Briggs S, Brunkard JO, Hake S The Plant cell 31217219 Plant Cell 2019 Aug
Plant Cell-Cell Transport via Plasmodesmata Is Regulated by Light and the Circadian Clock. Brunkard JO, Zambryski P Plant physiology 31601643 Plant Physiol 2019 Dec
Stress management: how NOD and LGN coordinate growth-defence tradeoffs in maize. Pierroz G The Plant journal : for cell and molecular biology 36415090 Plant J 2022 Nov
ConducTORs of a Signaling Symphony: Metabolic and Hormone Responses Converge on TOR and EIN2 in plants. Brunkard JO, Chang C, Mayer BJ, Meyer C, Sheen J Faculty reviews 35719129 Fac Rev 2022
Chloroplast redox state changes mark cell-to-cell signaling in the hypersensitive response. Lukan T, Županič A, Mahkovec Povalej T, Brunkard JO, Kmetič M, Juteršek M, Baebler Š, Gruden K The New phytologist 35946378 New Phytol 2023 Jan
Amino Acid Signaling for TOR in Eukaryotes: Sensors, Transducers, and a Sustainable Agricultural fuTORe. Lutt N, Brunkard JO Biomolecules 35327579 Biomolecules 2022 Mar 2
TOR coordinates nucleotide availability with ribosome biogenesis in plants. Busche M, Scarpin MR, Hnasko R, Brunkard JO The Plant cell 33793860 Plant Cell 2021 Jul 2
A Two-Headed Monster to Avert Disaster: HBS1/SKI7 Is Alternatively Spliced to Build Eukaryotic RNA Surveillance Complexes. Brunkard JO, Baker B Frontiers in plant science 30258456 Front Plant Sci 2018
Editorial overview: Cell biology. Gallagher KL, Brunkard JO Current opinion in plant biology 33342469 Curr Opin Plant Biol 2020 Dec
Parallel global profiling of plant TOR dynamics reveals a conserved role for LARP1 in translation. Scarpin MR, Leiboff S, Brunkard JO eLife 33054972 Elife 2020 Oct 15
DRMY1 promotes robust morphogenesis in Arabidopsis by sustaining the translation of cytokinin-signaling inhibitor proteins. Kong S, Zhu M, Scarpin MR, Pan D, Jia L, Martinez RE, Alamos S, Vadde BVL, Garcia HG, Qian SB, Brunkard JO, Roeder AHK Developmental cell 39305905 Dev Cell 2024 Dec 2
Simultaneous profiling of 3D genome structure and DNA methylation in single human cells. Lee DS, Luo C, Zhou J, Chandran S, Rivkin A, Bartlett A, Nery JR, Fitzpatrick C, O'Connor C, Dixon JR, Ecker JR Nature methods 31501549 Nat Methods 2019 Oct
Analysis of Hi-C Data for Discovery of Structural Variations in Cancer. Song F, Xu J, Dixon J, Yue F Methods in molecular biology (Clifton, N.J.) 34415534 Methods Mol Biol 2022
Foxp3 orchestrates reorganization of chromatin architecture to establish regulatory T cell identity. Liu Z, Lee DS, Liang Y, Zheng Y, Dixon JR Nature communications 37932264 Nat Commun 2023 Nov 6
Comparing 3D Genome Organization in Multiple Species Using Phylo-HMRF. Yang Y, Zhang Y, Ren B, Dixon JR, Ma J Cell systems 31229558 Cell Syst 2019 Jun 26
Dynamic regulation of histone modifications and long-range chromosomal interactions during postmitotic transcriptional reactivation. Kang H, Shokhirev MN, Xu Z, Chandran S, Dixon JR, Hetzer MW Genes & development 32499403 Genes Dev 2020 Jul 1
Coming full circle: On the origin and evolution of the looping model for enhancer-promoter communication. Popay TM, Dixon JR The Journal of biological chemistry 35691341 J Biol Chem 2022 Aug
Reduced synaptic activity and dysregulated extracellular matrix pathways in midbrain neurons from Parkinson's disease patients. Stern S, Lau S, Manole A, Rosh I, Percia MM, Ben Ezer R, Shokhirev MN, Qiu F, Schafer S, Mansour AA, Mangan KP, Stern T, Ofer P, Stern Y, Diniz Mendes AP, Djamus J, Moore LR, Nayak R, Laufer SH, Aicher A, Rhee A, Wong TL, Nguyen T, Linker SB, Winner B, Freitas BC, Jones E, Sagi I, Bardy C, Brice A, Winkler J, Marchetto MC, Gage FH NPJ Parkinson's disease 35948563 NPJ Parkinsons Dis 2022 Aug 10
Incorporation of a nucleoside analog maps genome repair sites in postmitotic human neurons. Reid DA, Reed PJ, Schlachetzki JCM, Nitulescu II, Chou G, Tsui EC, Jones JR, Chandran S, Lu AT, McClain CA, Ooi JH, Wang TW, Lana AJ, Linker SB, Ricciardulli AS, Lau S, Schafer ST, Horvath S, Dixon JR, Hah N, Glass CK, Gage FH Science (New York, N.Y.) 33795458 Science 2021 Apr 2
Structural variants drive context-dependent oncogene activation in cancer. Xu Z, Lee DS, Chandran S, Le VT, Bump R, Yasis J, Dallarda S, Marcotte S, Clock B, Haghani N, Cho CY, Akdemir KC, Tyndale S, Futreal PA, McVicker G, Wahl GM, Dixon JR Nature 36477537 Nature 2022 Dec
Somatic mutation distributions in cancer genomes vary with three-dimensional chromatin structure. Akdemir KC, Le VT, Kim JM, Killcoyne S, King DA, Lin YP, Tian Y, Inoue A, Amin SB, Robinson FS, Nimmakayalu M, Herrera RE, Lynn EJ, Chan K, Seth S, Klimczak LJ, Gerstung M, Gordenin DA, O'Brien J, Li L, Deribe YL, Verhaak RG, Campbell PJ, Fitzgerald R, Morrison AJ, Dixon JR, Andrew Futreal P Nature genetics 33020667 Nat Genet 2020 Nov
Integrative detection and analysis of structural variation in cancer genomes. Dixon JR, Xu J, Dileep V, Zhan Y, Song F, Le VT, Yardımcı GG, Chakraborty A, Bann DV, Wang Y, Clark R, Zhang L, Yang H, Liu T, Iyyanki S, An L, Pool C, Sasaki T, Rivera-Mulia JC, Ozadam H, Lajoie BR, Kaul R, Buckley M, Lee K, Diegel M, Pezic D, Ernst C, Hadjur S, Odom DT, Stamatoyannopoulos JA, Broach JR, Hardison RC, Ay F, Noble WS, Dekker J, Gilbert DM, Yue F Nature genetics 30202056 Nat Genet 2018 Oct
Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer. Akdemir KC, Le VT, Chandran S, Li Y, Verhaak RG, Beroukhim R, Campbell PJ, Chin L, Dixon JR, Futreal PA, PCAWG Structural Variation Working Group, PCAWG Consortium Nature genetics 32024999 Nat Genet 2020 Mar
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Diffuse Midline Gliomas with Histone H3-K27M Mutation: A Series of 47 Cases Assessing the Spectrum of Morphologic Variation and Associated Genetic Alterations. Solomon DA, Wood MD, Tihan T, Bollen AW, Gupta N, Phillips JJ, Perry A Brain pathology (Zurich, Switzerland) 26517431 Brain Pathol 2016 Sep
Genomic profiling of malignant peritoneal mesothelioma reveals recurrent alterations in epigenetic regulatory genes BAP1, SETD2, and DDX3X. Joseph NM, Chen YY, Nasr A, Yeh I, Talevich E, Onodera C, Bastian BC, Rabban JT, Garg K, Zaloudek C, Solomon DA Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 27813512 Mod Pathol 2017 Feb
Myxoid glioneuronal tumor, PDGFRA p.K385-mutant: clinical, radiologic, and histopathologic features. Lucas CG, Villanueva-Meyer JE, Whipple N, Oberheim Bush NA, Cooney T, Chang S, McDermott M, Berger M, Cham E, Sun PP, Putnam A, Zhou H, Bollo R, Cheshier S, Poppe MM, Fung KM, Sung S, Glenn C, Fan X, Bannykh S, Hu J, Danielpour M, Li R, Alva E, Johnston J, Van Ziffle J, Onodera C, Devine P, Grenert JP, Lee JC, Pekmezci M, Tihan T, Bollen AW, Perry A, Solomon DA Brain pathology (Zurich, Switzerland) 31609499 Brain Pathol 2020 May
A genetically distinct pediatric subtype of primary CNS large B-cell lymphoma is associated with favorable clinical outcome. Güney E, Lucas CG, Qi Z, Yu J, Zhang R, Ohgami RS, Rubenstein JL, Boué DR, Schafernak K, Wertheim GB, Dahiya S, Giulino-Roth L, Attarbaschi A, Barth MJ, Kothari S, Abla O, Cohen AL, Mendez JS, Bollen A, Perry A, Tihan T, Pekmezci M, Solomon DA, Wen KW Blood advances 35157770 Blood Adv 2022 May 24
Deconvoluting Mechanisms of Acquired Resistance to RAF Inhibitors in BRAF(V600E)-Mutant Human Glioma. Schreck KC, Morin A, Zhao G, Allen AN, Flannery P, Glantz M, Green AL, Jones C, Jones KL, Kilburn LB, Nazemi KJ, Samuel D, Sanford B, Solomon DA, Wang J, Pratilas CA, Nicolaides T, Mulcahy Levy JM Clinical cancer research : an official journal of the American Association for Cancer Research 34433654 Clin Cancer Res 2021 Nov 15
Genomic analysis of the origins and evolution of multicentric diffuse lower-grade gliomas. Hayes J, Yu Y, Jalbert LE, Mazor T, Jones LE, Wood MD, Walsh KM, Bengtsson H, Hong C, Oberndorfer S, Roetzer T, Smirnov IV, Clarke JL, Aghi MK, Chang SM, Nelson SJ, Woehrer A, Phillips JJ, Solomon DA, Costello JF Neuro-oncology 29077933 Neuro Oncol 2018 Apr 9
Genetic confirmation that ependymoma can arise as part of multiple endocrine neoplasia type 1 (MEN1) syndrome. Cuevas-Ocampo AK, Bollen AW, Goode B, Pajtler KW, Chavez L, Sharma T, Dai SC, McDermott M, Perry A, Korshunov A, Solomon DA Acta neuropathologica 28238068 Acta Neuropathol 2017 Apr
Well-differentiated papillary mesothelioma of the peritoneum is genetically defined by mutually exclusive mutations in TRAF7 and CDC42. Stevers M, Rabban JT, Garg K, Van Ziffle J, Onodera C, Grenert JP, Yeh I, Bastian BC, Zaloudek C, Solomon DA Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 30171198 Mod Pathol 2019 Jan
STAG2 deficiency induces interferon responses via cGAS-STING pathway and restricts virus infection. Ding S, Diep J, Feng N, Ren L, Li B, Ooi YS, Wang X, Brulois KF, Yasukawa LL, Li X, Kuo CJ, Solomon DA, Carette JE, Greenberg HB Nature communications 29662124 Nat Commun 2018 Apr 16
Deep sequencing of WNT-activated medulloblastomas reveals secondary SHH pathway activation. Iorgulescu JB, Van Ziffle J, Stevers M, Grenert JP, Bastian BC, Chavez L, Stichel D, Buchhalter I, Samuel D, Nicolaides T, Banerjee A, Mueller S, Gupta N, Tihan T, Bollen AW, Northcott PA, Kool M, Pfister S, Korshunov A, Perry A, Solomon DA Acta neuropathologica 29435664 Acta Neuropathol 2018 Apr
Loss of p16 expression is a sensitive marker of CDKN2A homozygous deletion in malignant meningiomas. Tang V, Lu R, Mirchia K, Van Ziffle J, Devine P, Lee J, Phillips JJ, Perry A, Raleigh DR, Lucas CG, Solomon DA Acta neuropathologica 36723772 Acta Neuropathol 2023 Apr
Iris and Ciliary Body Melanocytomas Are Defined by Solitary GNAQ Mutation Without Additional Oncogenic Alterations. Solomon DA, Ramani B, Eiger-Moscovich M, Milman T, Uludag G, Crawford JB, Phan I, Char DH, Shields CL, Eagle RC Jr, Bastian BC, Bloomer MM, Pekmezci M Ophthalmology 35835335 Ophthalmology 2022 Dec
IDH1 mutation can be present in diffuse astrocytomas and giant cell glioblastomas of young children under 10 years of age. Ferris SP, Goode B, Joseph NM, Kline CN, Samuel D, Gupta N, Bollen A, Perry A, Mueller S, Solomon DA Acta neuropathologica 27161253 Acta Neuropathol 2016 Jul
Multimodal molecular analysis of astroblastoma enables reclassification of most cases into more specific molecular entities. Wood MD, Tihan T, Perry A, Chacko G, Turner C, Pu C, Payne C, Yu A, Bannykh SI, Solomon DA Brain pathology (Zurich, Switzerland) 28960623 Brain Pathol 2018 Mar
Diffuse hemispheric glioma, H3 G34-mutant: Genomic landscape of a new tumor entity and prospects for targeted therapy. Lucas CG, Mueller S, Reddy A, Taylor JW, Oberheim Bush NA, Clarke JL, Chang SM, Gupta N, Berger MS, Perry A, Phillips JJ, Solomon DA Neuro-oncology 34519829 Neuro Oncol 2021 Nov 2
The immunohistochemical, DNA methylation, and chromosomal copy number profile of cauda equina paraganglioma is distinct from extra-spinal paraganglioma. Ramani B, Gupta R, Wu J, Barreto J, Bollen AW, Tihan T, Mummaneni PV, Ames C, Clark A, Oberheim Bush NA, Butowski N, Phillips D, King BE, Bator SM, Treynor EC, Zherebitskiy V, Quinn PS, Walker JB, Pekmezci M, Sullivan DV, Hofmann JW, Sloan EA, M Chang S, Berger MS, Solomon DA, Perry A Acta neuropathologica 32892244 Acta Neuropathol 2020 Dec
Inactivating MUTYH germline mutations in pediatric patients with high-grade midline gliomas. Kline CN, Joseph NM, Grenert JP, van Ziffle J, Yeh I, Bastian BC, Mueller S, Solomon DA Neuro-oncology 26902849 Neuro Oncol 2016 May
Primary intracranial sarcomas with DICER1 mutation often contain prominent eosinophilic cytoplasmic globules and can occur in the setting of neurofibromatosis type 1. Lee JC, Villanueva-Meyer JE, Ferris SP, Sloan EA, Hofmann JW, Hattab EM, Williams BJ, Guo H, Torkildson J, Florez A, Van Ziffle J, Onodera C, Grenert JP, Cho SJ, Horvai AE, Jones DTW, Pfister SM, Koelsche C, von Deimling A, Korshunov A, Perry A, Solomon DA Acta neuropathologica 30649606 Acta Neuropathol 2019 Mar
Exploiting molecular biology for diagnosis and targeted management of pediatric low-grade gliomas. Garcia MA, Solomon DA, Haas-Kogan DA Future oncology (London, England) 27072750 Future Oncol 2016 Jun
STAG2 Is a Biomarker for Prediction of Recurrence and Progression in Papillary Non-Muscle-Invasive Bladder Cancer. Lelo A, Prip F, Harris BT, Solomon D, Berry DL, Chaldekas K, Kumar A, Simko J, Jensen JB, Bhattacharyya P, Mannion C, Kim JS, Philips G, Dyrskjøt L, Waldman T Clinical cancer research : an official journal of the American Association for Cancer Research 29954776 Clin Cancer Res 2018 Sep 1
The genetic landscape of ganglioglioma. Pekmezci M, Villanueva-Meyer JE, Goode B, Van Ziffle J, Onodera C, Grenert JP, Bastian BC, Chamyan G, Maher OM, Khatib Z, Kleinschmidt-DeMasters BK, Samuel D, Mueller S, Banerjee A, Clarke JL, Cooney T, Torkildson J, Gupta N, Theodosopoulos P, Chang EF, Berger M, Bollen AW, Perry A, Tihan T, Solomon DA Acta neuropathologica communications 29880043 Acta Neuropathol Commun 2018 Jun 7
Angiocentric glioma with MYB-QKI fusion located in the brainstem, rather than cerebral cortex. Chan E, Bollen AW, Sirohi D, Van Ziffle J, Grenert JP, Kline CN, Tihan T, Perry A, Gupta N, Solomon DA Acta neuropathologica 28776091 Acta Neuropathol 2017 Oct
Targeted next-generation sequencing of pediatric neuro-oncology patients improves diagnosis, identifies pathogenic germline mutations, and directs targeted therapy. Kline CN, Joseph NM, Grenert JP, van Ziffle J, Talevich E, Onodera C, Aboian M, Cha S, Raleigh DR, Braunstein S, Torkildson J, Samuel D, Bloomer M, Campomanes AGA, Banerjee A, Butowski N, Raffel C, Tihan T, Bollen AW, Phillips JJ, Korn WM, Yeh I, Bastian BC, Gupta N, Mueller S, Perry A, Nicolaides T, Solomon DA Neuro-oncology 28453743 Neuro Oncol 2017 May 1
Multinodular and vacuolating neuronal tumor of the cerebrum is a clonal neoplasm defined by genetic alterations that activate the MAP kinase signaling pathway. Pekmezci M, Stevers M, Phillips JJ, Van Ziffle J, Bastian BC, Tsankova NM, Kleinschmidt-DeMasters BK, Rosenblum MK, Tihan T, Perry A, Solomon DA Acta neuropathologica 29428973 Acta Neuropathol 2018 Mar
A recurrent kinase domain mutation in PRKCA defines chordoid glioma of the third ventricle. Goode B, Mondal G, Hyun M, Ruiz DG, Lin YH, Van Ziffle J, Joseph NM, Onodera C, Talevich E, Grenert JP, Hewedi IH, Snuderl M, Brat DJ, Kleinschmidt-DeMasters BK, Rodriguez FJ, Louis DN, Yong WH, Lopes MB, Rosenblum MK, Butowski N, Tihan T, Bollen AW, Phillips JJ, Wiita AP, Yeh I, Jacobson MP, Bastian BC, Perry A, Solomon DA Nature communications 29476136 Nat Commun 2018 Feb 23
Multiregion exome sequencing of ovarian immature teratomas reveals 2N near-diploid genomes, paucity of somatic mutations, and extensive allelic imbalances shared across mature, immature, and disseminated components. Heskett MB, Sanborn JZ, Boniface C, Goode B, Chapman J, Garg K, Rabban JT, Zaloudek C, Benz SC, Spellman PT, Solomon DA, Cho RJ Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 31911616 Mod Pathol 2020 Jun
Diffusion Characteristics of Pediatric Diffuse Midline Gliomas with Histone H3-K27M Mutation Using Apparent Diffusion Coefficient Histogram Analysis. Aboian MS, Tong E, Solomon DA, Kline C, Gautam A, Vardapetyan A, Tamrazi B, Li Y, Jordan CD, Felton E, Weinberg B, Braunstein S, Mueller S, Cha S AJNR. American journal of neuroradiology 31694820 AJNR Am J Neuroradiol 2019 Nov
The genetic landscape of gliomas arising after therapeutic radiation. López GY, Van Ziffle J, Onodera C, Grenert JP, Yeh I, Bastian BC, Clarke J, Oberheim Bush NA, Taylor J, Chang S, Butowski N, Banerjee A, Mueller S, Kline C, Torkildson J, Samuel D, Siongco A, Raffel C, Gupta N, Kunwar S, Mummaneni P, Aghi M, Theodosopoulos P, Berger M, Phillips JJ, Pekmezci M, Tihan T, Bollen AW, Perry A, Solomon DA Acta neuropathologica 30196423 Acta Neuropathol 2019 Jan
Myxoid glioneuronal tumor of the septum pellucidum and lateral ventricle is defined by a recurrent PDGFRA p.K385 mutation and DNT-like methylation profile. Solomon DA, Korshunov A, Sill M, Jones DTW, Kool M, Pfister SM, Fan X, Bannykh S, Hu J, Danielpour M, Li R, Johnston J, Cham E, Cooney T, Sun PP, Oberheim Bush NA, McDermott M, Van Ziffle J, Onodera C, Grenert JP, Bastian BC, Villanueva-Meyer JE, Pekmezci M, Bollen AW, Perry A Acta neuropathologica 30006677 Acta Neuropathol 2018 Aug
Comprehensive analysis of diverse low-grade neuroepithelial tumors with FGFR1 alterations reveals a distinct molecular signature of rosette-forming glioneuronal tumor. Lucas CG, Gupta R, Doo P, Lee JC, Cadwell CR, Ramani B, Hofmann JW, Sloan EA, Kleinschmidt-DeMasters BK, Lee HS, Wood MD, Grafe M, Born D, Vogel H, Salamat S, Puccetti D, Scharnhorst D, Samuel D, Cooney T, Cham E, Jin LW, Khatib Z, Maher O, Chamyan G, Brathwaite C, Bannykh S, Mueller S, Kline CN, Banerjee A, Reddy A, Taylor JW, Clarke JL, Oberheim Bush NA, Butowski N, Gupta N, Auguste KI, Sun PP, Roland JL, Raffel C, Aghi MK, Theodosopoulos P, Chang E, Hervey-Jumper S, Phillips JJ, Pekmezci M, Bollen AW, Tihan T, Chang S, Berger MS, Perry A, Solomon DA Acta neuropathologica communications 32859279 Acta Neuropathol Commun 2020 Aug 28
Low-grade glioneuronal tumors with FGFR2 fusion resolve into a single epigenetic group corresponding to 'Polymorphous low-grade neuroepithelial tumor of the young'. Gupta R, Lucas CG, Wu J, Barreto J, Shah K, Simon IB, Casavilca-Zambrano S, Brathwaite C, Zhou H, Caccamo D, Gilani A, Kleinschmidt-DeMasters BK, Lee JC, Perry A, Clarke JL, Chang SM, Berger MS, Solomon DA Acta neuropathologica 34322742 Acta Neuropathol 2021 Sep
Targeted Next-Generation Sequencing Reveals Divergent Clonal Evolution in Components of Composite Pleomorphic Xanthoastrocytoma-Ganglioglioma. Lucas CG, Davidson CJ, Alashari M, Putnam AR, Whipple NS, Bruggers CS, Mendez JS, Cheshier SH, Walker JB, Ramani B, Cadwell CR, Sullivan DV, Lu R, Mirchia K, Van Ziffle J, Devine P, Goldschmidt E, Hervey-Jumper SL, Gupta N, Oberheim Bush NA, Raleigh DR, Bollen A, Tihan T, Pekmezci M, Solomon DA, Phillips JJ, Perry A Journal of neuropathology and experimental neurology 35703914 J Neuropathol Exp Neurol 2022 Jul 19
Genetic and epigenetic characterization of posterior pituitary tumors. Schmid S, Solomon DA, Perez E, Thieme A, Kleinschmidt-DeMasters BK, Giannini C, Reinhardt A, Asa SL, Mete O, Stichel D, Siewert C, Dittmayer C, Hasselblatt M, Paulus W, Nagel C, Harter PN, Schittenhelm J, Honegger J, Rushing E, Coras R, Pfister SM, Buslei R, Koch A, Perry A, Jones DTW, von Deimling A, Capper D, Lopes MB Acta neuropathologica 34661724 Acta Neuropathol 2021 Dec
Intracranial mesenchymal tumor with FET-CREB fusion-A unifying diagnosis for the spectrum of intracranial myxoid mesenchymal tumors and angiomatoid fibrous histiocytoma-like neoplasms. Sloan EA, Chiang J, Villanueva-Meyer JE, Alexandrescu S, Eschbacher JM, Wang W, Mafra M, Ud Din N, Carr-Boyd E, Watson M, Punsoni M, Oviedo A, Gilani A, Kleinschmidt-DeMasters BK, Coss DJ, Lopes MB, Raffel C, Berger MS, Chang SM, Reddy A, Ramani B, Ferris SP, Lee JC, Hofmann JW, Cho SJ, Horvai AE, Pekmezci M, Tihan T, Bollen AW, Rodriguez FJ, Ellison DW, Perry A, Solomon DA Brain pathology (Zurich, Switzerland) 33141488 Brain Pathol 2021 Jul
Adenomatoid tumors of the male and female genital tract are defined by TRAF7 mutations that drive aberrant NF-kB pathway activation. Goode B, Joseph NM, Stevers M, Van Ziffle J, Onodera C, Talevich E, Grenert JP, Yeh I, Bastian BC, Phillips JJ, Garg K, Rabban JT, Zaloudek C, Solomon DA Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 29148537 Mod Pathol 2018 Apr
Imaging Characteristics of Pediatric Diffuse Midline Gliomas with Histone H3 K27M Mutation. Aboian MS, Solomon DA, Felton E, Mabray MC, Villanueva-Meyer JE, Mueller S, Cha S AJNR. American journal of neuroradiology 28183840 AJNR Am J Neuroradiol 2017 Apr
Complete durable response of a pediatric anaplastic oligodendroglioma to temozolomide alone: Case report and review of literature. Sorge C, Li R, Singh S, Reddy AT, Solomon DA, Perry A, Friedman GK Pediatric blood & cancer 28696020 Pediatr Blood Cancer 2017 Dec
Cell of origin and mutation pattern define three clinically distinct classes of sebaceous carcinoma. North JP, Golovato J, Vaske CJ, Sanborn JZ, Nguyen A, Wu W, Goode B, Stevers M, McMullen K, Perez White BE, Collisson EA, Bloomer M, Solomon DA, Benz SC, Cho RJ Nature communications 29760388 Nat Commun 2018 May 14
Activating NRF1-BRAF and ATG7-RAF1 fusions in anaplastic pleomorphic xanthoastrocytoma without BRAF p.V600E mutation. Phillips JJ, Gong H, Chen K, Joseph NM, van Ziffle J, Jin LW, Bastian BC, Bollen AW, Perry A, Nicolaides T, Solomon DA, Shieh JT Acta neuropathologica 27624885 Acta Neuropathol 2016 Nov
The role of histone modifications and telomere alterations in the pathogenesis of diffuse gliomas in adults and children. Lee J, Solomon DA, Tihan T Journal of neuro-oncology 28064387 J Neurooncol 2017 Mar
Histopathologic review of pineal parenchymal tumors identifies novel morphologic subtypes and prognostic factors for outcome. Raleigh DR, Solomon DA, Lloyd SA, Lazar A, Garcia MA, Sneed PK, Clarke JL, McDermott MW, Berger MS, Tihan T, Haas-Kogan DA Neuro-oncology 27282397 Neuro Oncol 2017 Jan
Oligodendrogliomas, IDH-mutant and 1p/19q-codeleted, arising during teenage years often lack TERT promoter mutation that is typical of their adult counterparts. Lee J, Putnam AR, Chesier SH, Banerjee A, Raffel C, Van Ziffle J, Onodera C, Grenert JP, Bastian BC, Perry A, Solomon DA Acta neuropathologica communications 30231927 Acta Neuropathol Commun 2018 Sep 19
EWSR1-BEND2 fusion defines an epigenetically distinct subtype of astroblastoma. Lucas CG, Gupta R, Wu J, Shah K, Ravindranathan A, Barreto J, Gener M, Ginn KF, Prall OWJ, Xu H, Kee D, Ko HS, Yaqoob N, Zia N, Florez A, Cha S, Perry A, Clarke JL, Chang SM, Berger MS, Solomon DA Acta neuropathologica 34825267 Acta Neuropathol 2022 Jan
Activating NTRK2 and ALK receptor tyrosine kinase fusions extend the molecular spectrum of pleomorphic xanthoastrocytomas of early childhood: a diagnostic overlap with infant-type hemispheric glioma. Lucas CG, Abdullaev Z, Bruggers CS, Mirchia K, Whipple NS, Alashari MM, Lowichik A, Cheshier S, Phillips JJ, Devine P, Solomon DA, Quezado M, Aldape KD, Perry A Acta neuropathologica 34910220 Acta Neuropathol 2022 Feb
Clinicopathologic and molecular features of intracranial desmoplastic small round cell tumors. Lee JC, Villanueva-Meyer JE, Ferris SP, Cham EM, Zucker J, Cooney T, Gilani A, Kleinschmidt-DeMasters BK, Trembath D, Mafra M, Chiang J, Ellison DW, Cho SJ, Horvai AE, Van Ziffle J, Onodera C, Devine P, Grenert JP, de Voijs CMA, van Blokland WTM, de Leng WWJ, Ploegmakers MJ, Flucke U, Pekmezci M, Bollen AW, Tihan T, Koelsche C, von Deimling A, Wesseling P, Solomon DA, Perry A Brain pathology (Zurich, Switzerland) 31837177 Brain Pathol 2020 Mar
Loss of ZNF750 in ocular and cutaneous sebaceous carcinoma. North JP, Solomon DA, Golovato J, Bloomer M, Benz SC, Cho RJ Journal of cutaneous pathology 31148199 J Cutan Pathol 2019 Oct
ALK-positive histiocytosis with KIF5B-ALK fusion in the central nervous system. Lucas CG, Gilani A, Solomon DA, Liang X, Maher OM, Chamyan G, Kleinschmidt-Demasters BK, Perry A Acta neuropathologica 31119374 Acta Neuropathol 2019 Aug
High-grade neuroepithelial tumor with BCOR exon 15 internal tandem duplication-a comprehensive clinical, radiographic, pathologic, and genomic analysis. Ferris SP, Velazquez Vega J, Aboian M, Lee JC, Van Ziffle J, Onodera C, Grenert JP, Saunders T, Chen YY, Banerjee A, Kline CN, Gupta N, Raffel C, Samuel D, Ruiz-Diaz I, Magaki S, Wilson D, Neltner J, Al-Hajri Z, Phillips JJ, Pekmezci M, Bollen AW, Tihan T, Schniederjan M, Cha S, Perry A, Solomon DA Brain pathology (Zurich, Switzerland) 31104347 Brain Pathol 2020 Jan
The genetic landscape of anaplastic pleomorphic xanthoastrocytoma. Phillips JJ, Gong H, Chen K, Joseph NM, van Ziffle J, Bastian BC, Grenert JP, Kline CN, Mueller S, Banerjee A, Nicolaides T, Gupta N, Berger MS, Lee HS, Pekmezci M, Tihan T, Bollen AW, Perry A, Shieh JTC, Solomon DA Brain pathology (Zurich, Switzerland) 30051528 Brain Pathol 2019 Jan
Loss of H3K27 trimethylation by immunohistochemistry is frequent in oligodendroglioma, IDH-mutant and 1p/19q-codeleted, but is neither a sensitive nor a specific marker. Pekmezci M, Phillips JJ, Dirilenoglu F, Atasever-Rezanko T, Tihan T, Solomon D, Bollen A, Perry A Acta neuropathologica 31912209 Acta Neuropathol 2020 Mar
Recurrent KBTBD4 small in-frame insertions and absence of DROSHA deletion or DICER1 mutation differentiate pineal parenchymal tumor of intermediate differentiation (PPTID) from pineoblastoma. Lee JC, Mazor T, Lao R, Wan E, Diallo AB, Hill NS, Thangaraj N, Wendelsdorf K, Samuel D, Kline CN, Banerjee A, Auguste K, Raffel C, Gupta N, Berger M, Raleigh DR, Shai A, Phillips JJ, Bollen AW, Tihan T, Perry A, Costello J, Solomon DA Acta neuropathologica 30877433 Acta Neuropathol 2019 May
Recurrent non-canonical histone H3 mutations in spinal cord diffuse gliomas. Sloan EA, Cooney T, Oberheim Bush NA, Buerki R, Taylor J, Clarke JL, Torkildson J, Kline C, Reddy A, Mueller S, Banerjee A, Butowski N, Chang S, Mummaneni PV, Chou D, Tan L, Theodosopoulos P, McDermott M, Berger M, Raffel C, Gupta N, Sun PP, Li Y, Shah V, Cha S, Braunstein S, Raleigh DR, Samuel D, Scharnhorst D, Fata C, Guo H, Moes G, Kim JYH, Koschmann C, Van Ziffle J, Onodera C, Devine P, Grenert JP, Lee JC, Pekmezci M, Phillips JJ, Tihan T, Bollen AW, Perry A, Solomon DA Acta neuropathologica 31515627 Acta Neuropathol 2019 Nov
A review of recently described genetic alterations in central nervous system tumors. Lucas CG, Solomon DA, Perry A Human pathology 31678207 Hum Pathol 2020 Feb
A requirement for STAG2 in replication fork progression creates a targetable synthetic lethality in cohesin-mutant cancers. Mondal G, Stevers M, Goode B, Ashworth A, Solomon DA Nature communications 30975996 Nat Commun 2019 Apr 11
Diffuse non-midline glioma with H3F3A K27M mutation: a prognostic and treatment dilemma. López G, Oberheim Bush NA, Berger MS, Perry A, Solomon DA Acta neuropathologica communications 28506301 Acta Neuropathol Commun 2017 May 15
Diffuse midline gliomas with subclonal H3F3A K27M mutation and mosaic H3.3 K27M mutant protein expression. Lopez GY, Oberheim Bush NA, Phillips JJ, Bouffard JP, Moshel YA, Jaeckle K, Kleinschmidt-DeMasters BK, Rosenblum MK, Perry A, Solomon DA Acta neuropathologica 29063183 Acta Neuropathol 2017 Dec
Familial melanoma-astrocytoma syndrome: synchronous diffuse astrocytoma and pleomorphic xanthoastrocytoma in a patient with germline CDKN2A/B deletion and a significant family history. Chan AK, Han SJ, Choy W, Beleford D, Aghi MK, Berger MS, Shieh JT, Bollen AW, Perry A, Phillips JJ, Butowski N, Solomon DA Clinical neuropathology 28699883 Clin Neuropathol 2017 Sep/Oct
Tumor DNA requirements for accurate epigenetic-based classification of CNS neoplasia. Wu J, Gupta R, Barreto J, Doo P, Joseph NM, Lee JC, Perry A, Chang SM, Berger MS, Solomon DA Neuro-oncology 34351421 Neuro Oncol 2021 Oct 1
Intratumor and informatic heterogeneity influence meningioma molecular classification. Vasudevan HN, Choudhury A, Hilz S, Villanueva-Meyer JE, Chen WC, Lucas CG, Braunstein SE, Oberheim Bush NA, Butowski N, Pekmezci M, McDermott MW, Perry A, Solomon DA, Magill ST, Raleigh DR Acta neuropathologica 35759011 Acta Neuropathol 2022 Sep
Multiplatform molecular analyses refine classification of gliomas arising in patients with neurofibromatosis type 1. Lucas CG, Sloan EA, Gupta R, Wu J, Pratt D, Vasudevan HN, Ravindranathan A, Barreto J, Williams EA, Shai A, Whipple NS, Bruggers CS, Maher O, Nabors B, Rodriguez M, Samuel D, Brown M, Carmichael J, Lu R, Mirchia K, Sullivan DV, Pekmezci M, Tihan T, Bollen AW, Perry A, Banerjee A, Mueller S, Gupta N, Hervey-Jumper SL, Oberheim Bush NA, Daras M, Taylor JW, Butowski NA, de Groot J, Clarke JL, Raleigh DR, Costello JF, Phillips JJ, Reddy AT, Chang SM, Berger MS, Solomon DA Acta neuropathologica 35945463 Acta Neuropathol 2022 Oct
Intracranial mesenchymal tumors with FET-CREB fusion are composed of at least two epigenetic subgroups distinct from meningioma and extracranial sarcomas. Sloan EA, Gupta R, Koelsche C, Chiang J, Villanueva-Meyer JE, Alexandrescu S, Eschbacher JM, Wang W, Mafra M, Ud Din N, Carr-Boyd E, Watson M, Punsoni M, Oviedo A, Gilani A, Kleinschmidt-DeMasters BK, Coss DJ, Lopes MB, Reddy A, Mueller S, Cho SJ, Horvai AE, Lee JC, Pekmezci M, Tihan T, Bollen AW, Rodriguez FJ, Ellison DW, Perry A, von Deimling A, Chang SM, Berger MS, Solomon DA Brain pathology (Zurich, Switzerland) 34821426 Brain Pathol 2022 Jul
Next-Generation Sequencing of Retinoblastoma Identifies Pathogenic Alterations beyond RB1 Inactivation That Correlate with Aggressive Histopathologic Features. Afshar AR, Pekmezci M, Bloomer MM, Cadenas NJ, Stevers M, Banerjee A, Roy R, Olshen AB, Van Ziffle J, Onodera C, Devine WP, Grenert JP, Bastian BC, Solomon DA, Damato BE Ophthalmology 32139107 Ophthalmology 2020 Jun
Gliomas arising in the setting of Li-Fraumeni syndrome stratify into two molecular subgroups with divergent clinicopathologic features. Sloan EA, Hilz S, Gupta R, Cadwell C, Ramani B, Hofmann J, Kline CN, Banerjee A, Reddy A, Oberheim Bush NA, Chang S, Braunstein S, Chang EF, Raffel C, Gupta N, Sun PP, Kim JYH, Moes G, Alva E, Li R, Bruggers CS, Alashari M, Wetmore C, Garg S, Dishop M, Van Ziffle J, Onodera C, Devine P, Grenert JP, Lee JC, Phillips JJ, Pekmezci M, Tihan T, Bollen AW, Berger MS, Costello JF, Perry A, Solomon DA Acta neuropathologica 32157385 Acta Neuropathol 2020 May
An update on the central nervous system manifestations of familial tumor predisposition syndromes. Solomon DA Acta neuropathologica 32016553 Acta Neuropathol 2020 Apr
Pediatric bithalamic gliomas have a distinct epigenetic signature and frequent EGFR exon 20 insertions resulting in potential sensitivity to targeted kinase inhibition. Mondal G, Lee JC, Ravindranathan A, Villanueva-Meyer JE, Tran QT, Allen SJ, Barreto J, Gupta R, Doo P, Van Ziffle J, Onodera C, Devine P, Grenert JP, Samuel D, Li R, Metrock LK, Jin LW, Antony R, Alashari M, Cheshier S, Whipple NS, Bruggers C, Raffel C, Gupta N, Kline CN, Reddy A, Banerjee A, Hall MD, Mehta MP, Khatib Z, Maher OM, Brathwaite C, Pekmezci M, Phillips JJ, Bollen AW, Tihan T, Lucas JT Jr, Broniscer A, Berger MS, Perry A, Orr BA, Solomon DA Acta neuropathologica 32303840 Acta Neuropathol 2020 Jun
Clinical, radiologic, and genetic characteristics of histone H3 K27M-mutant diffuse midline gliomas in adults. Schulte JD, Buerki RA, Lapointe S, Molinaro AM, Zhang Y, Villanueva-Meyer JE, Perry A, Phillips JJ, Tihan T, Bollen AW, Pekmezci M, Butowski N, Oberheim Bush NA, Taylor JW, Chang SM, Theodosopoulos P, Aghi MK, Hervey-Jumper SL, Berger MS, Solomon DA, Clarke JL Neuro-oncology advances 33354667 Neurooncol Adv 2020 Jan-Dec
Conserved features of TERT promoter duplications reveal an activation mechanism that mimics hotspot mutations in cancer. Barger CJ, Suwala AK, Soczek KM, Wang AS, Kim MY, Hong C, Doudna JA, Chang SM, Phillips JJ, Solomon DA, Costello JF Nature communications 36114166 Nat Commun 2022 Sep 16
Molecular profiling identifies at least 3 distinct types of posttransplant lymphoproliferative disorder involving the CNS. Guney E, Lucas CG, Singh K, Pekmezci M, Fernandez-Pol S, Mirchia K, Toland A, Vogel H, Bannykh S, Schafernak KT, Alexandrescu S, Mobley BC, Powell S, Davidson CJ, Neltner J, Boué DR, Hattab E, Ferris SP, Ohgami RS, Rubenstein JL, Bollen AW, Tihan T, Perry A, Solomon DA, Wen KW Blood advances 36897259 Blood Adv 2023 Jul 11
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Leveraging the science of stress to promote resilience and optimize mental health interventions during adolescence. Gee DG, Sisk LM, Cohodes EM, Bryce NV Nature communications 36171218 Nat Commun 2022 Sep 28
When Uncertainty Is a Certainty: Optimizing Exposure-Based Therapies. Gee DG, Odriozola P Biological psychiatry global open science 36325300 Biol Psychiatry Glob Open Sci 2021 Sep
Training the Next Generation of Clinical Psychological Scientists: A Data-Driven Call to Action. Gee DG, DeYoung KA, McLaughlin KA, Tillman RM, Barch DM, Forbes EE, Krueger RF, Strauman TJ, Weierich MR, Shackman AJ Annual review of clinical psychology 35216523 Annu Rev Clin Psychol 2022 May 9
Associations among negative life events, changes in cortico-limbic connectivity, and psychopathology in the ABCD Study. Brieant AE, Sisk LM, Gee DG Developmental cognitive neuroscience 34710799 Dev Cogn Neurosci 2021 Dec
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Responding to threat: Associations between neural reactivity to and behavioral avoidance of threat in pediatric anxiety. Kitt ER, Zacharek SJ, Odriozola P, Nardini C, Hommel G, Martino A, Anderson T, Spencer H, Broussard A, Dean J, Marin CE, Silverman WK, Lebowitz ER, Gee DG Journal of affective disorders 38290579 J Affect Disord 2024 Apr 15
Lack of robust associations between prepandemic coping strategies and frontolimbic circuitry with depression and anxiety symptoms during the COVID-19 pandemic: A preregistered longitudinal study. Holt-Gosselin B, Cohodes EM, McCauley S, Foster JC, Odriozola P, Zacharek SJ, Kribakaran S, Haberman JT, Hodges HR, Gee DG Behavioral neuroscience 36395014 Behav Neurosci 2022 Dec
Parental Buffering of Stress in the Time of COVID-19: Family-Level Factors May Moderate the Association Between Pandemic-Related Stress and Youth Symptomatology. Cohodes EM, McCauley S, Gee DG Research on child and adolescent psychopathology 33591457 Res Child Adolesc Psychopathol 2021 Jul
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Predicting Mental Health in Adolescence: Frontoinsular Circuitry, Emotion in Daily Life, and Risk for Depression. Gee DG, Caballero C Biological psychiatry. Cognitive neuroscience and neuroimaging 31395211 Biol Psychiatry Cogn Neurosci Neuroimaging 2019 Aug
Meta-analysis of Structural Magnetic Resonance Imaging Studies in Pediatric Posttraumatic Stress Disorder and Comparison With Related Conditions. Kribakaran S, Danese A, Bromis K, Kempton MJ, Gee DG Biological psychiatry. Cognitive neuroscience and neuroimaging 31690501 Biol Psychiatry Cogn Neurosci Neuroimaging 2020 Jan
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Normative range parenting and the developing brain: A scoping review and recommendations for future research. Farber MJ, Gee DG, Hariri AR The European journal of neuroscience 33051903 Eur J Neurosci 2022 May
Migration-related trauma and mental health among migrant children emigrating from Mexico and Central America to the United States: Effects on developmental neurobiology and implications for policy. Cohodes EM, Kribakaran S, Odriozola P, Bakirci S, McCauley S, Hodges HR, Sisk LM, Zacharek SJ, Gee DG Developmental psychobiology 34292596 Dev Psychobiol 2021 Sep
Associations among Household and Neighborhood Socioeconomic Disadvantages, Resting-state Frontoamygdala Connectivity, and Internalizing Symptoms in Youth. Ip KI, Sisk LM, Horien C, Conley MI, Rapuano KM, Rosenberg MD, Greene AS, Scheinost D, Constable RT, Casey BJ, Baskin-Sommers A, Gee DG Journal of cognitive neuroscience 35104356 J Cogn Neurosci 2022 Sep 1
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Development and validation of the Dimensional Inventory of Stress and Trauma Across the Lifespan (DISTAL): A novel assessment tool to facilitate the dimensional study of psychobiological sequelae of exposure to adversity. Cohodes EM, McCauley S, Pierre JC, Hodges HR, Haberman JT, Santiuste I, Rogers MK, Wang J, Mandell JD, Gee DG Developmental psychobiology 37073593 Dev Psychobiol 2023 May
Person-centered analyses reveal that developmental adversity at moderate levels and neural threat/safety discrimination are associated with lower anxiety in early adulthood. Sisk LM, Keding TJ, Ruiz S, Odriozola P, Kribakaran S, Cohodes EM, McCauley S, Zacharek SJ, Hodges HR, Haberman JT, Pierre JC, Caballero C, Baskin-Sommers A, Gee DG Communications psychology 40044923 Commun Psychol 2025 Mar 5
Reforming clinical psychological science training: The importance of collaborative decision-making with trainees. Gee DG, Shackman AJ Clinical psychological science : a journal of the Association for Psychological Science 38550306 Clin Psychol Sci 2024 Jan
The Role of the Endocannabinoid System and Genetic Variation in Adolescent Brain Development. Meyer HC, Lee FS, Gee DG Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology 28685756 Neuropsychopharmacology 2018 Jan
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Hippocampal Involvement in Safety Signal Learning Varies With Anxiety Among Healthy Adults. Odriozola P, Kribakaran S, Cohodes EM, Zacharek SJ, McCauley S, Haberman JT, Quintela LA, Hernandez C, Spencer H, Pruessner L, Caballero C, Gee DG Biological psychiatry global open science 38298801 Biol Psychiatry Glob Open Sci 2024 Jan
Neurodevelopmental mechanisms linking early experiences and mental health: Translating science to promote well-being among youth. Gee DG The American psychologist 36595400 Am Psychol 2022 Dec
Managing fear and anxiety in development: A framework for understanding the neurodevelopment of emotion regulation capacity and tendency. Caballero C, Nook EC, Gee DG Neuroscience and biobehavioral reviews 36529313 Neurosci Biobehav Rev 2023 Feb
Validation of an electronic self-administered version of the Dimensional Inventory of Stress and Trauma Across the Lifespan in a large sample of young adults. Cohodes EM, Mandell JD, Notti ME, Schroeder MM, Ababio R, McCauley S, Pierre JC, Hodges HR, Gee DG Psychological trauma : theory, research, practice and policy 37956029 Psychol Trauma 2023 Nov 13
Novel insights from actigraphy: Anxiety is associated with sleep quantity but not quality during childhood. Cohodes EM, Abusch A, Odriozola P, Gee DG Clinical child psychology and psychiatry 30696260 Clin Child Psychol Psychiatry 2020 Jan
Experimental evidence for a child-to-adolescent switch in human amygdala-prefrontal cortex communication: A cross-sectional pilot study. Gee DG, Hanson C, Caglar LR, Fareri DS, Gabard-Durnam LJ, Mills-Finnerty C, Goff B, Caldera CJ, Lumian DS, Flannery J, Hanson SJ, Tottenham N Developmental science 35080089 Dev Sci 2022 Jul
Emotion and Emotion Preferences in Daily Life: The Role of Anxiety. Vanderlind WM, Everaert J, Caballero C, Cohodes EM, Gee DG Clinical psychological science : a journal of the Association for Psychological Science 35174008 Clin Psychol Sci 2021 Jun 7
Caregiving Influences on Development: A Sensitive Period for Biological Embedding of Predictability and Safety Cues. Gee DG, Cohodes EM Current directions in psychological science 34675455 Curr Dir Psychol Sci 2021 Oct 1
Genetic variation in endocannabinoid signaling is associated with differential network-level functional connectivity in youth. Sisk LM, Rapuano KM, Conley MI, Greene AS, Horien C, Rosenberg MD, Scheinost D, Constable RT, Glatt CE, Casey BJ, Gee DG Journal of neuroscience research 34496065 J Neurosci Res 2022 Mar
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Designing and implementing an integrated non-communicable disease primary care intervention in rural Nepal. Kumar A, Schwarz D, Acharya B, Agrawal P, Aryal A, Choudhury N, Citrin D, Dangal B, Deukmedjian G, Dhimal M, Dhungana S, Gauchan B, Gupta T, Halliday S, Jha D, Kalaunee SP, Karmacharya B, Kishore S, Koirala B, Kunwar L, Mahar R, Maru S, Mehanni S, Nirola I, Pandey S, Pant B, Pathak M, Poudel S, Rajbhandari I, Raut A, Rimal P, Schwarz R, Shrestha A, Thapa A, Thapa P, Thapa R, Wong L, Maru D BMJ global health 31139453 BMJ Glob Health 2019
Treatment recommendations made by a consultant psychiatrist to improve the quality of care in a collaborative mental health intervention in rural Nepal. Rimal P, Maru D, Chwastiak L, Agrawal P, Rao D, Swar S, Citrin D, Acharya B BMC psychiatry 32024490 BMC Psychiatry 2020 Feb 5
External validation of a mobile clinical decision support system for diarrhea etiology prediction in children: A multicenter study in Bangladesh and Mali. Garbern SC, Nelson EJ, Nasrin S, Keita AM, Brintz BJ, Gainey M, Badji H, Nasrin D, Howard J, Taniuchi M, Platts-Mills JA, Kotloff KL, Haque R, Levine AC, Sow SO, Alam NH, Leung DT eLife 35137684 Elife 2022 Feb 9
Development and evaluation of a clinical guideline for a paediatric telemedicine service in a low-resource setting. Klarman MB, Chi X, Cajusma Y, Flaherty KE, Capois AC, Dofiné MDV, Exantus L, Friesen J, Beau de Rochars VM, Becker T, Baril C, Gurka MJ, Nelson EJ BMJ paediatrics open 38191203 BMJ Paediatr Open 2024 Jan 8
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Evaluation of Standard and Mobile Health-Supported Clinical Diagnostic Tools for Assessing Dehydration in Patients with Diarrhea in Rural Bangladesh. Bilal S, Nelson E, Meisner L, Alam M, Al Amin S, Ashenafi Y, Teegala S, Khan AF, Alam N, Levine A The American journal of tropical medicine and hygiene 29761756 Am J Trop Med Hyg 2018 Jul
Gold Standard Cholera Diagnostics Are Tarnished by Lytic Bacteriophage and Antibiotics. Nelson EJ, Grembi JA, Chao DL, Andrews JR, Alexandrova L, Rodriguez PH, Ramachandran VV, Sayeed MA, Wamala JF, Debes AK, Sack DA, Hryckowian AJ, Haque F, Khatun S, Rahman M, Chien A, Spormann AM, Schoolnik GK Journal of clinical microbiology 32611794 J Clin Microbiol 2020 Aug 24
Bacteroides thetaiotaomicron-Infecting Bacteriophage Isolates Inform Sequence-Based Host Range Predictions. Hryckowian AJ, Merrill BD, Porter NT, Van Treuren W, Nelson EJ, Garlena RA, Russell DA, Martens EC, Sonnenburg JL Cell host & microbe 32652063 Cell Host Microbe 2020 Sep 9
Evaluation of a Smartphone Decision-Support Tool for Diarrheal Disease Management in a Resource-Limited Setting. Haque F, Ball RL, Khatun S, Ahmed M, Kache S, Chisti MJ, Sarker SA, Maples SD, Pieri D, Vardhan Korrapati T, Sarnquist C, Federspiel N, Rahman MW, Andrews JR, Rahman M, Nelson EJ PLoS neglected tropical diseases 28103233 PLoS Negl Trop Dis 2017 Jan
Improving Antibiotic Stewardship for Diarrheal Disease With Probability-Based Electronic Clinical Decision Support: A Randomized Crossover Trial. Nelson EJ, Khan AI, Keita AM, Brintz BJ, Keita Y, Sanogo D, Islam MT, Khan ZH, Rashid MM, Nasrin D, Watt MH, Ahmed SM, Haaland B, Pavia AT, Levine AC, Chao DL, Kotloff KL, Qadri F, Sow SO, Leung DT JAMA pediatrics 36036920 JAMA Pediatr 2022 Oct 1
Genome-wide association studies reveal distinct genetic correlates and increased heritability of antimicrobial resistance in Vibrio cholerae under anaerobic conditions. Creasy-Marrazzo A, Saber MM, Kamat M, Bailey LS, Brinkley L, Cato E, Begum Y, Rashid MM, Khan AI, Qadri F, Basso KB, Shapiro BJ, Nelson EJ Microbial genomics 36748512 Microb Genom 2022 Dec
Implementation of a Pediatric Telemedicine and Medication Delivery Service in a Resource-limited Setting: A Pilot Study for Clinical Safety and Feasibility. Klarman MB, Flaherty KE, Chi X, Cajusma Y, Capois AC, Vladimir Dofiné MD, Exantus L, Friesen J, Beau de Rochars VM, Baril C, Gurka MJ, Becker TK, Nelson EJ The Journal of pediatrics 36528053 J Pediatr 2023 Jun
Derivation and external validation of a clinical prognostic model identifying children at risk of death following presentation for diarrheal care. Ahmed SM, Brintz BJ, Talbert A, Ngari M, Pavlinac PB, Platts-Mills JA, Levine AC, Nelson EJ, Walson JL, Kotloff KL, Berkley JA, Leung DT medRxiv : the preprint server for health sciences 36798150 medRxiv 2023 Feb 10
Identification of Widespread Antibiotic Exposure in Patients With Cholera Correlates With Clinically Relevant Microbiota Changes. Alexandrova L, Haque F, Rodriguez P, Marrazzo AC, Grembi JA, Ramachandran V, Hryckowian AJ, Adams CM, Siddique MSA, Khan AI, Qadri F, Andrews JR, Rahman M, Spormann AM, Schoolnik GK, Chien A, Nelson EJ The Journal of infectious diseases 31192364 J Infect Dis 2019 Oct 8
Opportunities to catalyse improved healthcare access in pluralistic systems: a cross-sectional study in Haiti. Klarman M, Schon J, Cajusma Y, Maples S, Beau de Rochars VEM, Baril C, Nelson EJ BMJ open 34810180 BMJ Open 2021 Nov 22
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Socioeconomic Determinants of Cipro-floxacin-Resistant Shigella Infections in Bangladeshi Children. Gruninger RJ, Johnson RA, Das SK, Nelson EJ, Spivak ES, Contreras JR, Faruque ASG, Leung DT Pathogens & immunity 28603782 Pathog Immun 2017
Toxigenic Vibrio cholerae evolution and establishment of reservoirs in aquatic ecosystems. Mavian C, Paisie TK, Alam MT, Browne C, Beau De Rochars VM, Nembrini S, Cash MN, Nelson EJ, Azarian T, Ali A, Morris JG Jr, Salemi M Proceedings of the National Academy of Sciences of the United States of America 32229557 Proc Natl Acad Sci U S A 2020 Apr 7
An ethnographic exploration of diarrheal disease management in public hospitals in Bangladesh: From problems to solutions. Biswas D, Hossin R, Rahman M, Bardosh KL, Watt MH, Zion MI, Sujon H, Rashid MM, Salimuzzaman M, Flora MS, Qadri F, Khan AI, Nelson EJ Social science & medicine (1982) 32712557 Soc Sci Med 2020 Sep
Marginal zone B cells mediate a CD4 T-cell-dependent extrafollicular antibody response following RBC transfusion in mice. Zerra PE, Patel SR, Jajosky RP, Arthur CM, McCoy JW, Allen JWL, Chonat S, Fasano RM, Roback JD, Josephson CD, Hendrickson JE, Stowell SR Blood 33876205 Blood 2021 Aug 26
Nonhuman glycans can regulate anti-factor VIII antibody formation in mice. Arthur CM, Zerra PE, Shin S, Wang J, Song X, Doering CB, Lollar P, Meeks S, Stowell SR Blood 34019619 Blood 2022 Mar 3
Antibody-mediated immune suppression by antigen modulation is antigen-specific. Maier CL, Mener A, Patel SR, Jajosky RP, Bennett AL, Arthur CM, Hendrickson JE, Stowell SR Blood advances 30413434 Blood Adv 2018 Nov 13
The role of galectins in immunity and infection. Liu FT, Stowell SR Nature reviews. Immunology 36646848 Nat Rev Immunol 2023 Aug
Daratumumab (anti-CD38) induces loss of CD38 on red blood cells. Sullivan HC, Gerner-Smidt C, Nooka AK, Arthur CM, Thompson L, Mener A, Patel SR, Yee M, Fasano RM, Josephson CD, Kaufman RM, Roback JD, Lonial S, Stowell SR Blood 28373263 Blood 2017 Jun 1
Examining the Role of Complement in Predicting, Preventing, and Treating Hemolytic Transfusion Reactions. Arthur CM, Chonat S, Fasano R, Yee MEM, Josephson CD, Roback JD, Stowell SR Transfusion medicine reviews 31679762 Transfus Med Rev 2019 Oct
Marginal Zone B Cells Induce Alloantibody Formation Following RBC Transfusion. Patel SR, Gibb DR, Girard-Pierce K, Zhou X, Rodrigues LC, Arthur CM, Bennett AL, Jajosky RP, Fuller M, Maier CL, Zerra PE, Chonat S, Smith NH, Tormey CA, Hendrickson JE, Stowell SR Frontiers in immunology 30505302 Front Immunol 2018
Galectin-9 Is a Novel Regulator of Epithelial Restitution. Robinson BS, Saeedi B, Arthur CM, Owens J, Naudin C, Ahmed N, Luo L, Jones R, Neish A, Stowell SR The American journal of pathology 32380082 Am J Pathol 2020 Aug
Innate immunity against molecular mimicry: Examining galectin-mediated antimicrobial activity. Arthur CM, Patel SR, Mener A, Kamili NA, Fasano RM, Meyer E, Winkler AM, Sola-Visner M, Josephson CD, Stowell SR BioEssays : news and reviews in molecular, cellular and developmental biology 26577077 Bioessays 2015 Dec
A photo-cross-linking GlcNAc analog enables covalent capture of N-linked glycoprotein-binding partners on the cell surface. Wu H, Shajahan A, Yang JY, Capota E, Wands AM, Arthur CM, Stowell SR, Moremen KW, Azadi P, Kohler JJ Cell chemical biology 34331854 Cell Chem Biol 2022 Jan 20
Innate immune Galectin-7 specifically targets microbes that decorate themselves in blood group-like antigens. Wu SC, Kamili NA, Dias-Baruffi M, Josephson CD, Rathgeber MF, Yeung MY, Lane WJ, Wang J, Jan HM, Rakoff-Nahoum S, Cummings RD, Stowell SR, Arthur CM iScience 35754739 iScience 2022 Jul 15
Complement Component 3 Negatively Regulates Antibody Response by Modulation of Red Blood Cell Antigen. Mener A, Arthur CM, Patel SR, Liu J, Hendrickson JE, Stowell SR Frontiers in immunology 29942300 Front Immunol 2018
Key regulators of galectin-glycan interactions. Kamili NA, Arthur CM, Gerner-Smidt C, Tafesse E, Blenda A, Dias-Baruffi M, Stowell SR Proteomics 27582340 Proteomics 2016 Dec
CD8+ T cells mediate antibody-independent platelet clearance in mice. Arthur CM, Patel SR, Sullivan HC, Winkler AM, Tormey CA, Hendrickson JE, Stowell SR Blood 26787734 Blood 2016 Apr 7
Targeting altered glycosylation in secreted tumor glycoproteins for broad cancer detection. Kudelka MR, Gu W, Matsumoto Y, Ju T, Barnes Ii RH, Kardish RJ, Heimburg-Molinaro J, Lehoux S, Zeng J, Cohen C, Robinson BS, Shah KS, Chaikof EL, Stowell SR, Cummings RD Glycobiology 37216646 Glycobiology 2023 Aug 14
Recipient priming to one RBC alloantigen directly enhances subsequent alloimmunization in mice. Patel SR, Bennett A, Girard-Pierce K, Maier CL, Chonat S, Arthur CM, Zerra PE, Mener A, Stowell SR Blood advances 29365318 Blood Adv 2018 Jan 23
Generation and Use of Recombinant Galectins. Wu SC, Paul A, Ho A, Patel KR, Allen JWL, Verkerke H, Arthur CM, Stowell SR Current protocols 33656274 Curr Protoc 2021 Mar
Galectin-9 recognizes and exhibits antimicrobial activity toward microbes expressing blood group-like antigens. Blenda AV, Kamili NA, Wu SC, Abel WF, Ayona D, Gerner-Smidt C, Ho AD, Benian GM, Cummings RD, Arthur CM, Stowell SR The Journal of biological chemistry 35148986 J Biol Chem 2022 Apr
Full-Length Galectin-3 Is Required for High Affinity Microbial Interactions and Antimicrobial Activity. Wu SC, Ho AD, Kamili NA, Wang J, Murdock KL, Cummings RD, Arthur CM, Stowell SR Frontiers in microbiology 34690972 Front Microbiol 2021
Protein glycosylation in cancer. Stowell SR, Ju T, Cummings RD Annual review of pathology 25621663 Annu Rev Pathol 2015
The Sweet-Side of Leukocytes: Galectins as Master Regulators of Neutrophil Function. Robinson BS, Arthur CM, Evavold B, Roback E, Kamili NA, Stowell CS, Vallecillo-Zúniga ML, Van Ry PM, Dias-Baruffi M, Cummings RD, Stowell SR Frontiers in immunology 31440233 Front Immunol 2019
Anemia induces gut inflammation and injury in an animal model of preterm infants. Arthur CM, Nalbant D, Feldman HA, Saeedi BJ, Matthews J, Robinson BS, Kamili NA, Bennett A, Cress GA, Sola-Visner M, Jones RM, Zimmerman MB, Neish AS, Patel RM, Nopoulos P, Georgieff MK, Roback JD, Widness JA, Josephson CD, Stowell SR Transfusion 30897226 Transfusion 2019 Apr
Cosmc is an X-linked inflammatory bowel disease risk gene that spatially regulates gut microbiota and contributes to sex-specific risk. Kudelka MR, Hinrichs BH, Darby T, Moreno CS, Nishio H, Cutler CE, Wang J, Wu H, Zeng J, Wang Y, Ju T, Stowell SR, Nusrat A, Jones RM, Neish AS, Cummings RD Proceedings of the National Academy of Sciences of the United States of America 27930307 Proc Natl Acad Sci U S A 2016 Dec 20
Antibody-mediated immunosuppression can result from RBC antigen loss independent of Fcγ receptors in mice. Mener A, Patel SR, Arthur CM, Stowell SR Transfusion 30474857 Transfusion 2019 Jan
Complement serves as a switch between CD4+ T cell-independent and -dependent RBC antibody responses. Mener A, Patel SR, Arthur CM, Chonat S, Wieland A, Santhanakrishnan M, Liu J, Maier CL, Jajosky RP, Girard-Pierce K, Bennett A, Zerra PE, Smith NH, Hendrickson JE, Stowell SR JCI insight 30429364 JCI Insight 2018 Nov 15
Antigen Density Dictates Immune Responsiveness following Red Blood Cell Transfusion. Arthur CM, Patel SR, Smith NH, Bennett A, Kamili NA, Mener A, Gerner-Smidt C, Sullivan HC, Hale JS, Wieland A, Youngblood B, Zimring JC, Hendrickson JE, Stowell SR Journal of immunology (Baltimore, Md. : 1950) 28250159 J Immunol 2017 Apr 1
Fc Gamma Receptors and Complement Component 3 Facilitate Anti-fVIII Antibody Formation. Zerra PE, Arthur CM, Chonat S, Maier CL, Mener A, Shin S, Allen JWL, Baldwin WH, Cox C, Verkerke H, Jajosky RP, Tormey CA, Meeks SL, Stowell SR Frontiers in immunology 32582142 Front Immunol 2020
Intestinal epithelial glycosylation in homeostasis and gut microbiota interactions in IBD. Kudelka MR, Stowell SR, Cummings RD, Neish AS Nature reviews. Gastroenterology & hepatology 32710014 Nat Rev Gastroenterol Hepatol 2020 Oct
ABO blood group antigens and differential glycan expression: Perspective on the evolution of common human enzyme deficiencies. Jajosky RP, Wu SC, Zheng L, Jajosky AN, Jajosky PG, Josephson CD, Hollenhorst MA, Sackstein R, Cummings RD, Arthur CM, Stowell SR iScience 36691627 iScience 2023 Jan 20
Rapid Ventilator Splitting During COVID-19 Pandemic Using 3D Printed Devices and Numerical Modeling of 200 Million Patient Specific Air Flow Scenarios. Bishawi M, Kaplan M, Chidyagwai S, Cappiello J, Cherry A, MacLeod D, Gall K, Evans N, Kim M, Shaha R, Whittle J, Hollidge M, Truskey G, Randles A Research square 32818206 Res Sq 2020 Aug 12
Characterization of hemodynamics in anomalous aortic origin of coronary arteries using patient-specific modeling. Chidyagwai SG, Vardhan M, Kaplan M, Chamberlain R, Barker P, Randles A Journal of biomechanics 35063831 J Biomech 2022 Feb
Multivascular networks and functional intravascular topologies within biocompatible hydrogels. Grigoryan B, Paulsen SJ, Corbett DC, Sazer DW, Fortin CL, Zaita AJ, Greenfield PT, Calafat NJ, Gounley JP, Ta AH, Johansson F, Randles A, Rosenkrantz JE, Louis-Rosenberg JD, Galie PA, Stevens KR, Miller JS Science (New York, N.Y.) 31048486 Science 2019 May 3
Multi-GPU Immersed Boundary Method Hemodynamics Simulations. Ames J, Puleri DF, Balogh P, Gounley J, Draeger EW, Randles A Journal of computational science 32754287 J Comput Sci 2020 Jul
Computational Framework to Evaluate the Hydrodynamics of Cell Scaffold Geometries. Puleri DF, Roychowdhury S, Ames J, Randles A Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference 33018467 Annu Int Conf IEEE Eng Med Biol Soc 2020 Jul
Computational Fluid Dynamics and Additive Manufacturing to Diagnose and Treat Cardiovascular Disease. Randles A, Frakes DH, Leopold JA Trends in biotechnology 28942268 Trends Biotechnol 2017 Nov
Hemodynamic and morphological characteristics of a growing cerebral aneurysm. Dabagh M, Nair P, Gounley J, Frakes D, Gonzalez LF, Randles A Neurosurgical focus 31261117 Neurosurg Focus 2019 Jul 1
A Framework for Comparing Vascular Hemodynamics at Different Points in Time. Gounley J, Vardhan M, Randles A Computer physics communications 30504967 Comput Phys Commun 2019 Feb
Accelerating massively parallel hemodynamic models of coarctation of the aorta using neural networks. Feiger B, Gounley J, Adler D, Leopold JA, Draeger EW, Chaudhury R, Ryan J, Pathangey G, Winarta K, Frakes D, Michor F, Randles A Scientific reports 32528104 Sci Rep 2020 Jun 11
Localization of Rolling and Firm-Adhesive Interactions Between Circulating Tumor Cells and the Microvasculature Wall. Dabagh M, Gounley J, Randles A Cellular and molecular bioengineering 32175027 Cell Mol Bioeng 2020 Apr
Determining the impacts of venoarterial extracorporeal membrane oxygenation on cerebral oxygenation using a one-dimensional blood flow simulator. Feiger B, Kochar A, Gounley J, Bonadonna D, Daneshmand M, Randles A Journal of biomechanics 32220425 J Biomech 2020 May 7
Massively parallel simulations of hemodynamics in the primary large arteries of the human vasculature. Randles A, Draeger EW, Bailey PE Journal of computational science 29152011 J Comput Sci 2015 Jul
Does the degree of coarctation of the aorta influence wall shear stress focal heterogeneity? Gounley J, Chaudhury R, Vardhan M, Driscoll M, Pathangey G, Winarta K, Ryan J, Frakes D, Randles A Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference 28269039 Annu Int Conf IEEE Eng Med Biol Soc 2016 Aug
Numerical simulation of a compound capsule in a constricted microchannel. Gounley J, Draeger EW, Randles A Procedia computer science 28831291 Procedia Comput Sci 2017
Non-invasive characterization of complex coronary lesions. Vardhan M, Gounley J, Chen SJ, Chi EC, Kahn AM, Leopold JA, Randles A Scientific reports 33854076 Sci Rep 2021 Apr 14
Investigating the Interaction Between Circulating Tumor Cells and Local Hydrodynamics via Experiment and Simulations. Pepona M, Balogh P, Puleri DF, Hynes WF, Robertson C, Dubbin K, Alvarado J, Moya ML, Randles A Cellular and molecular bioengineering 33184581 Cell Mol Bioeng 2020 Oct
Computing the ankle-brachial index with parallel computational fluid dynamics. Gounley J, Draeger EW, Oppelstrup T, Krauss WD, Gunnels JA, Chaudhury R, Nair P, Frakes D, Leopold JA, Randles A Journal of biomechanics 30385003 J Biomech 2019 Jan 3
Suitability of lattice Boltzmann inlet and outlet boundary conditions for simulating flow in image-derived vasculature. Feiger B, Vardhan M, Gounley J, Mortensen M, Nair P, Chaudhury R, Frakes D, Randles A International journal for numerical methods in biomedical engineering 30838793 Int J Numer Method Biomed Eng 2019 Jun
The role of adhesive receptor patterns on cell transport in complex microvessels. Puleri DF, Randles A Biomechanics and modeling in mechanobiology 35507242 Biomech Model Mechanobiol 2022 Aug
Propagation pattern for moment representation of the lattice Boltzmann method. Gounley J, Vardhan M, Draeger EW, Valero-Lara P, Moore SV, Randles A IEEE transactions on parallel and distributed systems : a publication of the IEEE Computer Society 35498162 IEEE Trans Parallel Distrib Syst 2022 Mar
Surgical Modulation of Pulmonary Artery Shear Stress: A Patient-Specific CFD Analysis of the Norwood Procedure. Chidyagwai SG, Kaplan MS, Jensen CW, Chen JS, Chamberlain RC, Hill KD, Barker PCA, Slesnick TC, Randles A Cardiovascular engineering and technology 38459240 Cardiovasc Eng Technol 2024 Aug
Computational modelling of perivascular-niche dynamics for the optimization of treatment schedules for glioblastoma. Randles A, Wirsching HG, Dean JA, Cheng YK, Emerson S, Pattwell SS, Holland EC, Michor F Nature biomedical engineering 33864039 Nat Biomed Eng 2021 Apr
Multiscale modeling of blood flow to assess neurological complications in patients supported by venoarterial extracorporeal membrane oxygenation. Feiger B, Adebiyi A, Randles A Computers in biology and medicine 33333365 Comput Biol Med 2021 Feb
Modeling the effect of patient size on cerebral perfusion during veno-arterial extracorporeal membrane oxygenation. Feiger B, Jensen CW, Bryner BS, Segars WP, Randles A Perfusion 37395266 Perfusion 2024 Oct
The effect of eviction moratoria on the transmission of SARS-CoV-2. Nande A, Sheen J, Walters EL, Klein B, Chinazzi M, Gheorghe AH, Adlam B, Shinnick J, Tejeda MF, Scarpino SV, Vespignani A, Greenlee AJ, Schneider D, Levy MZ, Hill AL Nature communications 33859196 Nat Commun 2021 Apr 15
Insight into treatment of HIV infection from viral dynamics models. Hill AL, Rosenbloom DIS, Nowak MA, Siliciano RF Immunological reviews 30129208 Immunol Rev 2018 Sep
Expanded cellular clones carrying replication-competent HIV-1 persist, wax, and wane. Wang Z, Gurule EE, Brennan TP, Gerold JM, Kwon KJ, Hosmane NN, Kumar MR, Beg SA, Capoferri AA, Ray SC, Ho YC, Hill AL, Siliciano JD, Siliciano RF Proceedings of the National Academy of Sciences of the United States of America 29483265 Proc Natl Acad Sci U S A 2018 Mar 13
Development of an oral once-weekly drug delivery system for HIV antiretroviral therapy. Kirtane AR, Abouzid O, Minahan D, Bensel T, Hill AL, Selinger C, Bershteyn A, Craig M, Mo SS, Mazdiyasni H, Cleveland C, Rogner J, Lee YL, Booth L, Javid F, Wu SJ, Grant T, Bellinger AM, Nikolic B, Hayward A, Wood L, Eckhoff PA, Nowak MA, Langer R, Traverso G Nature communications 29317618 Nat Commun 2018 Jan 9
Quantifying individual-level heterogeneity in infectiousness and susceptibility through household studies. Anderson TL, Nande A, Merenstein C, Raynor B, Oommen A, Kelly BJ, Levy MZ, Hill AL Epidemics 37556994 Epidemics 2023 Sep
Crowding and the shape of COVID-19 epidemics. Rader B, Scarpino SV, Nande A, Hill AL, Adlam B, Reiner RC, Pigott DM, Gutierrez B, Zarebski AE, Shrestha M, Brownstein JS, Castro MC, Dye C, Tian H, Pybus OG, Kraemer MUG Nature medicine 33020651 Nat Med 2020 Dec
Imperfect drug penetration leads to spatial monotherapy and rapid evolution of multidrug resistance. Moreno-Gamez S, Hill AL, Rosenbloom DI, Petrov DA, Nowak MA, Pennings PS Proceedings of the National Academy of Sciences of the United States of America 26038564 Proc Natl Acad Sci U S A 2015 Jun 2
Designing and Interpreting Limiting Dilution Assays: General Principles and Applications to the Latent Reservoir for Human Immunodeficiency Virus-1. Rosenbloom DI, Elliott O, Hill AL, Henrich TJ, Siliciano JM, Siliciano RF Open forum infectious diseases 26478893 Open Forum Infect Dis 2015 Dec
Vaccine failure mode determines population-level impact of vaccination campaigns during epidemics. Lee DI, Nande A, Anderson TL, Levy MZ, Hill AL Journal of the Royal Society, Interface 39965640 J R Soc Interface 2025 Feb
Chaos synchronization and Nelder-Mead search for parameter estimation in nonlinear pharmacological systems: Estimating tumor antigenicity in a model of immunotherapy. Pillai N, Craig M, Dokoumetzidis A, Schwartz SL, Bies R, Freedman I Progress in biophysics and molecular biology 29928905 Prog Biophys Mol Biol 2018 Nov
Evolution and emergence of infectious diseases in theoretical and real-world networks. Leventhal GE, Hill AL, Nowak MA, Bonhoeffer S Nature communications 25592476 Nat Commun 2015 Jan 16
Dynamics of bed bug infestations and control under disclosure policies. Xie S, Hill AL, Rehmann CR, Levy MZ Proceedings of the National Academy of Sciences of the United States of America 30833386 Proc Natl Acad Sci U S A 2019 Mar 26
Real-Time Predictions of Reservoir Size and Rebound Time during Antiretroviral Therapy Interruption Trials for HIV. Hill AL, Rosenbloom DI, Goldstein E, Hanhauser E, Kuritzkes DR, Siliciano RF, Henrich TJ PLoS pathogens 27119536 PLoS Pathog 2016 Apr
Dynamics of COVID-19 under social distancing measures are driven by transmission network structure. Nande A, Adlam B, Sheen J, Levy MZ, Hill AL PLoS computational biology 33534808 PLoS Comput Biol 2021 Feb
A Systematic Review of Coronavirus Disease 2019 Vaccine Efficacy and Effectiveness Against Severe Acute Respiratory Syndrome Coronavirus 2 Infection and Disease. Higdon MM, Wahl B, Jones CB, Rosen JG, Truelove SA, Baidya A, Nande AA, ShamaeiZadeh PA, Walter KK, Feikin DR, Patel MK, Deloria Knoll M, Hill AL Open forum infectious diseases 35611346 Open Forum Infect Dis 2022 Jun
Dynamics of COVID-19 under social distancing measures are driven by transmission network structure. Nande A, Adlam B, Sheen J, Levy MZ, Hill AL medRxiv : the preprint server for health sciences 32577691 medRxiv 2021 Jan 15
The effect of eviction moratoria on the transmission of SARS-CoV-2. Nande A, Sheen J, Walters EL, Klein B, Chinazzi M, Gheorghe A, Adlam B, Shinnick J, Tejeda MF, Scarpino SV, Vespignani A, Greenlee AJ, Schneider D, Levy MZ, Hill AL medRxiv : the preprint server for health sciences 33140067 medRxiv 2021 Jan 19
Quantifying individual-level heterogeneity in infectiousness and susceptibility through household studies. Anderson TL, Nande A, Merenstein C, Raynor B, Oommen A, Kelly BJ, Levy MZ, Hill AL medRxiv : the preprint server for health sciences 36523404 medRxiv 2022 Dec 6
Predicting the outcomes of treatment to eradicate the latent reservoir for HIV-1. Hill AL, Rosenbloom DI, Fu F, Nowak MA, Siliciano RF Proceedings of the National Academy of Sciences of the United States of America 25097264 Proc Natl Acad Sci U S A 2014 Sep 16
Insufficient Evidence for Rare Activation of Latent HIV in the Absence of Reservoir-Reducing Interventions. Hill AL, Rosenbloom DI, Siliciano JD, Siliciano RF PLoS pathogens 27560936 PLoS Pathog 2016 Aug
Life cycle synchronization is a viral drug resistance mechanism. Neagu IA, Olejarz J, Freeman M, Rosenbloom DIS, Nowak MA, Hill AL PLoS computational biology 29447150 PLoS Comput Biol 2018 Feb
Modeling HIV persistence and cure studies. Hill AL Current opinion in HIV and AIDS 29916846 Curr Opin HIV AIDS 2018 Sep
TLR7 agonists induce transient viremia and reduce the viral reservoir in SIV-infected rhesus macaques on antiretroviral therapy. Lim SY, Osuna CE, Hraber PT, Hesselgesser J, Gerold JM, Barnes TL, Sanisetty S, Seaman MS, Lewis MG, Geleziunas R, Miller MD, Cihlar T, Lee WA, Hill AL, Whitney JB Science translational medicine 29720451 Sci Transl Med 2018 May 2
Towards Quantitative Systems Pharmacology Models of Chemotherapy-Induced Neutropenia. Craig M CPT: pharmacometrics & systems pharmacology 28418603 CPT Pharmacometrics Syst Pharmacol 2017 May
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Striatal amyloid is associated with tauopathy and memory decline in familial Alzheimer's disease. Hanseeuw BJ, Lopera F, Sperling RA, Norton DJ, Guzman-Velez E, Baena A, Pardilla-Delgado E, Schultz AP, Gatchel J, Jin D, Chen K, Reiman EM, Johnson KA, Quiroz YT Alzheimer's research & therapy 30717814 Alzheimers Res Ther 2019 Feb 4
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Retinal Imaging Findings in Carriers With PSEN1-Associated Early-Onset Familial Alzheimer Disease Before Onset of Cognitive Symptoms. Armstrong GW, Kim LA, Vingopoulos F, Park JY, Garg I, Kasetty M, Silverman RF, Zeng R, Douglas VP, Lopera F, Baena A, Giraldo M, Norton D, Cronin-Golomb A, Arboleda-Velasquez JF, Quiroz YT, Miller JB JAMA ophthalmology 33180114 JAMA Ophthalmol 2021 Jan 1
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Association Between Amyloid and Tau Accumulation in Young Adults With Autosomal Dominant Alzheimer Disease. Quiroz YT, Sperling RA, Norton DJ, Baena A, Arboleda-Velasquez JF, Cosio D, Schultz A, Lapoint M, Guzman-Velez E, Miller JB, Kim LA, Chen K, Tariot PN, Lopera F, Reiman EM, Johnson KA JAMA neurology 29435558 JAMA Neurol 2018 May 1
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Subjective memory complaints in preclinical autosomal dominant Alzheimer disease. Norton DJ, Amariglio R, Protas H, Chen K, Aguirre-Acevedo DC, Pulsifer B, Castrillon G, Tirado V, Munoz C, Tariot P, Langbaum JB, Reiman EM, Lopera F, Sperling RA, Quiroz YT Neurology 28878053 Neurology 2017 Oct 3
Association Between Visual Memory and In Vivo Amyloid and Tau Pathology in Preclinical Autosomal Dominant Alzheimer's Disease. Bocanegra Y, Fox-Fuller JT, Baena A, Guzmán-Vélez E, Vila-Castelar C, Martínez J, Torrico-Teave H, Lopera F, Quiroz YT Journal of the International Neuropsychological Society : JINS 32762790 J Int Neuropsychol Soc 2021 Jan
Examining Sex Differences in Markers of Cognition and Neurodegeneration in Autosomal Dominant Alzheimer's Disease: Preliminary Findings from the Colombian Alzheimer's Prevention Initiative Biomarker Study. Vila-Castelar C, Guzmán-Vélez E, Pardilla-Delgado E, Buckley RF, Bocanegra Y, Baena A, Fox-Fuller JT, Tirado V, Muñoz C, Giraldo M, Acosta-Baena N, Rios-Romenets S, Langbaum JB, Tariot PN, Lopera F, Reiman EM, Quiroz YT Journal of Alzheimer's disease : JAD 32925067 J Alzheimers Dis 2020
Association of subjective cognitive decline with markers of brain pathology in preclinical autosomal dominant Alzheimer's disease. Gatchel JR, Lopera F, Norton DJ, Baena A, Guzman-Velez E, Sanchez JS, d'Oleire Uquillas F, Schultz A, Vannini P, Artola A, Amariglio RE, Rentz DM, Tariot PN, Reiman EM, Johnson KA, Sperling RA, Marshall GA, Quiroz YT Journal of neurology, neurosurgery, and psychiatry 31874859 J Neurol Neurosurg Psychiatry 2020 Mar
Associative memory and in vivo brain pathology in asymptomatic presenilin-1 E280A carriers. Guzmán-Vélez E, Martínez J, Papp K, Baena A, Vila-Castelar C, Artola A, Schultz AP, Bocanegra Y, Sanchez J, Rentz D, Tariot PN, Reiman EM, Sperling R, Johnson KA, Lopera F, Quiroz YT Neurology 32611637 Neurology 2020 Sep 8
Subjective Cognitive Decline and its Relation to Verbal Memory and Sex in Cognitively Unimpaired Individuals from a Colombian Cohort with Autosomal-Dominant Alzheimer's Disease. Martinez JE, Pardilla-Delgado E, Guzmán-Vélez E, Vila-Castelar C, Amariglio R, Gatchel J, Aguirre-Acevedo DC, Bocanegra Y, Baena A, Henao E, Tirado V, Muñoz C, Giraldo-Chica M, Lopera F, Quiroz YT Journal of the International Neuropsychological Society : JINS 34187609 J Int Neuropsychol Soc 2022 Jul
Visual working memory for semantically related objects in healthy adults. García-Magariño I, Fox-Fuller JT, Palacios-Navarro G, Baena A, Quiroz YT Revista de neurologia 33034365 Rev Neurol 2020 Oct 16
Testing the amyloid cascade hypothesis: Prevention trials in autosomal dominant Alzheimer disease. Levin J, Vöglein J, Quiroz YT, Bateman RJ, Ghisays V, Lopera F, McDade E, Reiman E, Tariot PN, Morris JC Alzheimer's & dementia : the journal of the Alzheimer's Association 35212149 Alzheimers Dement 2022 Dec
Sex differences in cognitive resilience in preclinical autosomal-dominant Alzheimer's disease carriers and non-carriers: Baseline findings from the API ADAD Colombia Trial. Vila-Castelar C, Tariot PN, Sink KM, Clayton D, Langbaum JB, Thomas RG, Chen Y, Su Y, Chen K, Hu N, Giraldo-Chica M, Tobón C, Acosta-Baena N, Luna E, Londoño M, Ospina P, Tirado V, Muñoz C, Henao E, Bocanegra Y, Alvarez S, Rios-Romenets S, Ghisays V, Goradia D, Lee W, Luo J, Malek-Ahmadi MH, Protas HD, Lopera F, Reiman EM, Quiroz YT, API ADAD Colombia Trial Group Alzheimer's & dementia : the journal of the Alzheimer's Association 35103388 Alzheimers Dement 2022 Nov
Global Cardiovascular Risk Profile and Cerebrovascular Abnormalities in Presymptomatic Individuals with CADASIL or Autosomal Dominant Alzheimer's Disease. Schoemaker D, Velilla-Jimenez L, Zuluaga Y, Baena A, Ospina C, Bocanegra Y, Alvarez S, Ochoa-Escudero M, Guzmán-Vélez E, Martinez J, Lopera F, Arboleda-Velasquez JF, Quiroz YT Journal of Alzheimer's disease : JAD 34092645 J Alzheimers Dis 2021
Associations between subregional thalamic volume and brain pathology in autosomal dominant Alzheimer's disease. Pardilla-Delgado E, Torrico-Teave H, Sanchez JS, Ramirez-Gomez LA, Baena A, Bocanegra Y, Vila-Castelar C, Fox-Fuller JT, Guzmán-Vélez E, Martínez J, Alvarez S, Ochoa-Escudero M, Lopera F, Quiroz YT Brain communications 34095834 Brain Commun 2021
Resilience to autosomal dominant Alzheimer's disease in a Reelin-COLBOS heterozygous man. Lopera F, Marino C, Chandrahas AS, O'Hare M, Villalba-Moreno ND, Aguillon D, Baena A, Sanchez JS, Vila-Castelar C, Ramirez Gomez L, Chmielewska N, Oliveira GM, Littau JL, Hartmann K, Park K, Krasemann S, Glatzel M, Schoemaker D, Gonzalez-Buendia L, Delgado-Tirado S, Arevalo-Alquichire S, Saez-Torres KL, Amarnani D, Kim LA, Mazzarino RC, Gordon H, Bocanegra Y, Villegas A, Gai X, Bootwalla M, Ji J, Shen L, Kosik KS, Su Y, Chen Y, Schultz A, Sperling RA, Johnson K, Reiman EM, Sepulveda-Falla D, Arboleda-Velasquez JF, Quiroz YT Nature medicine 37188781 Nat Med 2023 May
APOE Christchurch-mimetic therapeutic antibody reduces APOE-mediated toxicity and tau phosphorylation. Marino C, Perez-Corredor P, O'Hare M, Heuer A, Chmielewska N, Gordon H, Chandrahas AS, Gonzalez-Buendia L, Delgado-Tirado S, Doan TH, Vanderleest TE, Arevalo-Alquichire S, Obar RA, Ortiz-Cordero C, Villegas A, Sepulveda-Falla D, Kim LA, Lopera F, Mahley R, Huang Y, Quiroz YT, Arboleda-Velasquez JF Alzheimer's & dementia : the journal of the Alzheimer's Association 37791598 Alzheimers Dement 2024 Feb
Plasma neurofilament light chain in the presenilin 1 E280A autosomal dominant Alzheimer's disease kindred: a cross-sectional and longitudinal cohort study. Quiroz YT, Zetterberg H, Reiman EM, Chen Y, Su Y, Fox-Fuller JT, Garcia G, Villegas A, Sepulveda-Falla D, Villada M, Arboleda-Velasquez JF, Guzmán-Vélez E, Vila-Castelar C, Gordon BA, Schultz SA, Protas HD, Ghisays V, Giraldo M, Tirado V, Baena A, Munoz C, Rios-Romenets S, Tariot PN, Blennow K, Lopera F The Lancet. Neurology 32470423 Lancet Neurol 2020 Jun
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The Latin American Spanish version of the Face-Name Associative Memory Exam is sensitive to cognitive and pathological changes in preclinical autosomal dominant Alzheimer's disease. Vila-Castelar C, Muñoz N, Papp KV, Amariglio RE, Baena A, Guzmán-Vélez E, Bocanegra Y, Sanchez JS, Reiman EM, Johnson KA, Sperling RA, Lopera F, Rentz DM, Quiroz YT Alzheimer's research & therapy 32912283 Alzheimers Res Ther 2020 Sep 10
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Longitudinal amyloid and tau accumulation in autosomal dominant Alzheimer's disease: findings from the Colombia-Boston (COLBOS) biomarker study. Sanchez JS, Hanseeuw BJ, Lopera F, Sperling RA, Baena A, Bocanegra Y, Aguillon D, Guzmán-Vélez E, Pardilla-Delgado E, Ramirez-Gomez L, Vila-Castelar C, Martinez JE, Fox-Fuller JT, Ramos C, Ochoa-Escudero M, Alvarez S, Jacobs HIL, Schultz AP, Gatchel JR, Becker JA, Katz SR, Mayblyum DV, Price JC, Reiman EM, Johnson KA, Quiroz YT Alzheimer's research & therapy 33451357 Alzheimers Res Ther 2021 Jan 15
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Associations between plasma neurofilament light, in vivo brain pathology, and cognition in non-demented individuals with autosomal-dominant Alzheimer's disease. Guzmán-Vélez E, Zetterberg H, Fox-Fuller JT, Vila-Castelar C, Sanchez JS, Baena A, Garcia-Ospina G, Aguillon D, Pardilla-Delgado E, Gatchel JR, Sperling RA, Johnson K, Reiman EM, Blennow K, Lopera F, Quiroz YT Alzheimer's & dementia : the journal of the Alzheimer's Association 33527648 Alzheimers Dement 2021 May
Perspectives on ethnic and racial disparities in Alzheimer's disease and related dementias: Update and areas of immediate need. Babulal GM, Quiroz YT, Albensi BC, Arenaza-Urquijo E, Astell AJ, Babiloni C, Bahar-Fuchs A, Bell J, Bowman GL, Brickman AM, Chételat G, Ciro C, Cohen AD, Dilworth-Anderson P, Dodge HH, Dreux S, Edland S, Esbensen A, Evered L, Ewers M, Fargo KN, Fortea J, Gonzalez H, Gustafson DR, Head E, Hendrix JA, Hofer SM, Johnson LA, Jutten R, Kilborn K, Lanctôt KL, Manly JJ, Martins RN, Mielke MM, Morris MC, Murray ME, Oh ES, Parra MA, Rissman RA, Roe CM, Santos OA, Scarmeas N, Schneider LS, Schupf N, Sikkes S, Snyder HM, Sohrabi HR, Stern Y, Strydom A, Tang Y, Terrera GM, Teunissen C, Melo van Lent D, Weinborn M, Wesselman L, Wilcock DM, Zetterberg H, O'Bryant SE, International Society to Advance Alzheimer's Research and Treatment, Alzheimer's Association Alzheimer's & dementia : the journal of the Alzheimer's Association 30555031 Alzheimers Dement 2019 Feb
Genetic origin of a large family with a novel PSEN1 mutation (Ile416Thr). Ramirez Aguilar L, Acosta-Uribe J, Giraldo MM, Moreno S, Baena A, Alzate D, Cuastumal R, Aguillón D, Madrigal L, Saldarriaga A, Navarro A, Garcia GP, Aguirre-Acevedo DC, Geier EG, Cochran JN, Quiroz YT, Myers RM, Yokoyama JS, Kosik KS, Lopera F Alzheimer's & dementia : the journal of the Alzheimer's Association 30745123 Alzheimers Dement 2019 May
Cognitive Decline in a Colombian Kindred With Autosomal Dominant Alzheimer Disease: A Retrospective Cohort Study. Aguirre-Acevedo DC, Lopera F, Henao E, Tirado V, Muñoz C, Giraldo M, Bangdiwala SI, Reiman EM, Tariot PN, Langbaum JB, Quiroz YT, Jaimes F JAMA neurology 26902171 JAMA Neurol 2016 Apr
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Olfactory Function and Markers of Brain Pathology in Non-Demented Individuals with Autosomal Dominant Alzheimer's Disease. Ramirez-Gomez L, Albers MW, Baena A, Vila-Castelar C, Fox-Fuller JT, Sanchez J, Jain F, Albers AD, Lopera F, Quiroz YT Journal of Alzheimer's disease : JAD 35694921 J Alzheimers Dis 2022
Examining Cognitive Decline Across Black and White Participants in the Harvard Aging Brain Study. Amariglio RE, Buckley RF, Rabin JS, Papp KV, Quiroz YT, Mormino EC, Sparks KP, Johnson KA, Rentz DM, Sperling RA Journal of Alzheimer's disease : JAD 32417775 J Alzheimers Dis 2020
Waning locus coeruleus integrity precedes cortical tau accrual in preclinical autosomal dominant Alzheimer's disease. Jacobs HIL, Becker JA, Kwong K, Munera D, Ramirez-Gomez L, Engels-Domínguez N, Sanchez JS, Vila-Castelar C, Baena A, Sperling RA, Johnson KA, Lopera F, Quiroz YT Alzheimer's & dementia : the journal of the Alzheimer's Association 35298083 Alzheimers Dement 2023 Jan
A public resource of baseline data from the Alzheimer's Prevention Initiative Autosomal-Dominant Alzheimer's Disease Trial. Reiman EM, Pruzin JJ, Rios-Romenets S, Brown C, Giraldo M, Acosta-Baena N, Tobon C, Hu N, Chen Y, Ghisays V, Enos J, Goradia DD, Lee W, Luo J, Malek-Ahmadi M, Protas H, Thomas RG, Chen K, Su Y, Boker C, Mastroeni D, Alvarez S, Quiroz YT, Langbaum JB, Sink KM, Lopera F, Tariot PN, API ADAD Colombia Trial Group Alzheimer's & dementia : the journal of the Alzheimer's Association 36373344 Alzheimers Dement 2023 May
Multiplexed Ion Beam Imaging Readout of Single-Cell Immunoblotting. Lomeli G, Bosse M, Bendall SC, Angelo M, Herr AE Analytical chemistry 34106685 Anal Chem 2021 Jun 22
Transition to invasive breast cancer is associated with progressive changes in the structure and composition of tumor stroma. Risom T, Glass DR, Averbukh I, Liu CC, Baranski A, Kagel A, McCaffrey EF, Greenwald NF, Rivero-Gutiérrez B, Strand SH, Varma S, Kong A, Keren L, Srivastava S, Zhu C, Khair Z, Veis DJ, Deschryver K, Vennam S, Maley C, Hwang ES, Marks JR, Bendall SC, Colditz GA, West RB, Angelo M Cell 35063072 Cell 2022 Jan 20
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Multiplexed imaging reveals an IFN-γ-driven inflammatory state in nivolumab-associated gastritis. Ferrian S, Liu CC, McCaffrey EF, Kumar R, Nowicki TS, Dawson DW, Baranski A, Glaspy JA, Ribas A, Bendall SC, Angelo M Cell reports. Medicine 34755133 Cell Rep Med 2021 Oct 19
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Convex Regression with Interpretable Sharp Partitions. Petersen A, Simon N, Witten D Journal of machine learning research : JMLR 27635120 J Mach Learn Res 2016 Jun
Using Bayesian modeling in frequentist adaptive enrichment designs. Simon N, Simon R Biostatistics (Oxford, England) 28520893 Biostatistics 2018 Jan 1
A framework for estimating and testing qualitative interactions with applications to predictive biomarkers. Roth J, Simon N Biostatistics (Oxford, England) 28968765 Biostatistics 2018 Jul 1
Approval policies for modifications to machine learning-based software as a medical device: A study of bio-creep. Feng J, Emerson S, Simon N Biometrics 32981103 Biometrics 2021 Mar
Convex Modeling of Interactions with Strong Heredity. Haris A, Witten D, Simon N Journal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America 28316461 J Comput Graph Stat 2016
Epigenetic memory via concordant DNA methylation is inversely correlated to developmental potential of mammalian cells. Choi M, Genereux DP, Goodson J, Al-Azzawi H, Allain SQ, Simon N, Palasek S, Ware CB, Cavanaugh C, Miller DG, Johnson WC, Sinclair KD, Stöger R, Laird CD PLoS genetics 29107996 PLoS Genet 2017 Nov
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Fused Lasso Additive Model. Petersen A, Witten D, Simon N Journal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America 28239246 J Comput Graph Stat 2016
Selective prediction-set models with coverage rate guarantees. Feng J, Sondhi A, Perry J, Simon N Biometrics 34854476 Biometrics 2023 Jun
Learning to learn from data: Using deep adversarial learning to construct optimal statistical procedures. Luedtke A, Carone M, Simon N, Sofrygin O Science advances 32166115 Sci Adv 2020 Feb
Nonparametric variable importance assessment using machine learning techniques. Williamson BD, Gilbert PB, Carone M, Simon N Biometrics 33043428 Biometrics 2021 Mar
ESTIMATION OF CELL LINEAGE TREES BY MAXIMUM-LIKELIHOOD PHYLOGENETICS. Feng J, Dewitt WS 3rd, McKenna A, Simon N, Willis AD, Matsen FA 4th The annals of applied statistics 35990087 Ann Appl Stat 2021 Mar
A Flexible Framework for Nonparametric Graphical Modeling that Accommodates Machine Learning. Xiang Y, Simon N Proceedings of machine learning research 33415321 Proc Mach Learn Res 2020 Jul
Rank Conditional Coverage and Confidence Intervals in High-Dimensional Problems. Morrison J, Simon N Journal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America 30740009 J Comput Graph Stat 2018
Simultaneous detection and estimation of trait associations with genomic phenotypes. Morrison J, Simon N, Witten D Biostatistics (Oxford, England) 27496912 Biostatistics 2017 Jan
Rejoinder to "Nonparametric variable importance assessment using machine learning techniques". Williamson BD, Gilbert PB, Carone M, Simon N Biometrics 33290576 Biometrics 2021 Mar
Modeling cell-specific dynamics and regulation of the common gamma chain cytokines. Farhat AM, Weiner AC, Posner C, Kim ZS, Orcutt-Jahns B, Carlson SM, Meyer AS Cell reports 33910015 Cell Rep 2021 Apr 27
Dissecting FcγR Regulation through a Multivalent Binding Model. Robinett RA, Guan N, Lux A, Biburger M, Nimmerjahn F, Meyer AS Cell systems 29960887 Cell Syst 2018 Jul 25
An engineered human Fc domain that behaves like a pH-toggle switch for ultra-long circulation persistence. Lee CH, Kang TH, Godon O, Watanabe M, Delidakis G, Gillis CM, Sterlin D, Hardy D, Cogné M, Macdonald LE, Murphy AJ, Tu N, Lee J, McDaniel JR, Makowski E, Tessier PM, Meyer AS, Bruhns P, Georgiou G Nature communications 31695028 Nat Commun 2019 Nov 6
Systems biology approaches to measure and model phenotypic heterogeneity in cancer. Meyer AS, Heiser LM Current opinion in systems biology 32864511 Curr Opin Syst Biol 2019 Oct
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A biomaterial screening approach reveals microenvironmental mechanisms of drug resistance. Schwartz AD, Barney LE, Jansen LE, Nguyen TV, Hall CL, Meyer AS, Peyton SR Integrative biology : quantitative biosciences from nano to macro 29159332 Integr Biol (Camb) 2017 Dec 11
Selectivity in subunit composition of Ena/VASP tetramers. Riquelme DN, Meyer AS, Barzik M, Keating A, Gertler FB Bioscience reports 26221026 Biosci Rep 2015 Jul 28
JNK Pathway Activation Modulates Acquired Resistance to EGFR/HER2-Targeted Therapies. Manole S, Richards EJ, Meyer AS Cancer research 27450453 Cancer Res 2016 Sep 15
Apoptotic Bodies Elicit Gas6-Mediated Migration of AXL-Expressing Tumor Cells. Zweemer AJM, French CB, Mesfin J, Gordonov S, Meyer AS, Lauffenburger DA Molecular cancer research : MCR 28923840 Mol Cancer Res 2017 Dec
Systems Approaches to Cancer Biology. Archer TC, Fertig EJ, Gosline SJ, Hafner M, Hughes SK, Joughin BA, Meyer AS, Piccolo SR, Shajahan-Haq AN Cancer research 27864348 Cancer Res 2016 Dec 1
Versatile targeting system for lentiviral vectors involving biotinylated targeting molecules. Situ K, Chua BA, Bae SY, Meyer AS, Morizono K Virology 30290312 Virology 2018 Dec
Talker variability is not always the right noise: 14 month olds struggle to learn dissimilar word-object pairs under talker variability conditions. Bulgarelli F, Bergelson E Journal of experimental child psychology 36395621 J Exp Child Psychol 2023 Mar
Day by day, hour by hour: Naturalistic language input to infants. Bergelson E, Amatuni A, Dailey S, Koorathota S, Tor S Developmental science 30094888 Dev Sci 2019 Jan
A Collaborative Approach to Infant Research: Promoting Reproducibility, Best Practices, and Theory-Building. Frank MC, Bergelson E, Bergmann C, Cristia A, Floccia C, Gervain J, Hamlin JK, Hannon EE, Kline M, Levelt C, Lew-Williams C, Nazzi T, Panneton R, Rabagliati H, Soderstrom M, Sullivan J, Waxman S, Yurovsky D Infancy : the official journal of the International Society on Infant Studies 31772509 Infancy 2017 Jul-Aug
Analyzing the effect of sibling number on input and output in the first 18 months. Laing C, Bergelson E Infancy : the official journal of the International Society on Infant Studies 38183663 Infancy 2024 Mar-Apr
Vocal development in a large-scale crosslinguistic corpus. Cychosz M, Cristia A, Bergelson E, Casillas M, Baudet G, Warlaumont AS, Scaff C, Yankowitz L, Seidl A Developmental science 33497512 Dev Sci 2021 Sep
Familiarity plays a small role in noun comprehension at 12-18 months. Garrison H, Baudet G, Breitfeld E, Aberman A, Bergelson E Infancy : the official journal of the International Society on Infant Studies 32744800 Infancy 2020 Jul
Mothers' Work Status and 17-month-olds' Productive Vocabulary. Laing CE, Bergelson E Infancy : the official journal of the International Society on Infant Studies 30962769 Infancy 2019 Jan-Feb
Linking acoustic variability in the infants' input to their early word production. Bulgarelli F, Bergelson E Developmental science 38978148 Dev Sci 2024 Nov
Artificial intelligence-powered 3D analysis of video-based caregiver-child interactions. Weng Z, Bravo-Sánchez L, Wang Z, Howard C, Xenochristou M, Meister N, Kanazawa A, Milstein A, Bergelson E, Humphreys KL, Sanders LM, Yeung-Levy S Science advances 39951536 Sci Adv 2025 Feb 14
HomeBank: An Online Repository of Daylong Child-Centered Audio Recordings. VanDam M, Warlaumont AS, Bergelson E, Cristia A, Soderstrom M, De Palma P, MacWhinney B Seminars in speech and language 27111272 Semin Speech Lang 2016 May
What Do North American Babies Hear? A large-scale cross-corpus analysis. Bergelson E, Casillas M, Soderstrom M, Seidl A, Warlaumont AS, Amatuni A Developmental science 30369005 Dev Sci 2019 Jan
A thorough evaluation of the Language Environment Analysis (LENA) system. Cristia A, Lavechin M, Scaff C, Soderstrom M, Rowland C, Räsänen O, Bunce J, Bergelson E Behavior research methods 32728916 Behav Res Methods 2021 Apr
Point, walk, talk: Links between three early milestones, from observation and parental report. Moore C, Dailey S, Garrison H, Amatuni A, Bergelson E Developmental psychology 31094558 Dev Psychol 2019 Aug
The Comprehension Boost in Early Word Learning: Older Infants Are Better Learners. Bergelson E Child development perspectives 33569084 Child Dev Perspect 2020 Sep
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Semantic Specificity in One-Year-Olds' Word Comprehension. Bergelson E, Aslin R Language learning and development : the official journal of the Society for Language Development 29200981 Lang Learn Dev 2017
Young Infants' Word Comprehension Given An Unfamiliar Talker or Altered Pronunciations. Bergelson E, Swingley D Child development 28639708 Child Dev 2018 Sep
Look who's talking: A comparison of automated and human-generated speaker tags in naturalistic day-long recordings. Bulgarelli F, Bergelson E Behavior research methods 31342467 Behav Res Methods 2020 Apr
How adults understand what young children say. Meylan SC, Foushee R, Wong NH, Bergelson E, Levy RP Nature human behaviour 37884678 Nat Hum Behav 2023 Dec
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From babble to words: Infants' early productions match words and objects in their environment. Laing C, Bergelson E Cognitive psychology 32504852 Cogn Psychol 2020 Nov
Accuracy of the Language Environment Analysis System Segmentation and Metrics: A Systematic Review. Cristia A, Bulgarelli F, Bergelson E Journal of speech, language, and hearing research : JSLHR 32302262 J Speech Lang Hear Res 2020 Apr 27
Talker variability shapes early word representations in English-learning 8-month-olds. Bulgarelli F, Bergelson E Infancy : the official journal of the International Society on Infant Studies 34997679 Infancy 2022 Mar
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Structures of chaperone-associated assembly intermediates reveal coordinated mechanisms of proteasome biogenesis. Schnell HM, Walsh RM Jr, Rawson S, Kaur M, Bhanu MK, Tian G, Prado MA, Guerra-Moreno A, Paulo JA, Gygi SP, Roelofs J, Finley D, Hanna J Nature structural & molecular biology 33846632 Nat Struct Mol Biol 2021 May
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Targeted Degradation of Glucose Transporters Protects against Arsenic Toxicity. Jochem M, Ende L, Isasa M, Ang J, Schnell H, Guerra-Moreno A, Micoogullari Y, Bhanu M, Gygi SP, Hanna J Molecular and cellular biology 30886123 Mol Cell Biol 2019 May 15
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Lipidomic Analysis of α-Synuclein Neurotoxicity Identifies Stearoyl CoA Desaturase as a Target for Parkinson Treatment. Fanning S, Haque A, Imberdis T, Baru V, Barrasa MI, Nuber S, Termine D, Ramalingam N, Ho GPH, Noble T, Sandoe J, Lou Y, Landgraf D, Freyzon Y, Newby G, Soldner F, Terry-Kantor E, Kim TE, Hofbauer HF, Becuwe M, Jaenisch R, Pincus D, Clish CB, Walther TC, Farese RV Jr, Srinivasan S, Welte MA, Kohlwein SD, Dettmer U, Lindquist S, Selkoe D Molecular cell 30527540 Mol Cell 2019 Mar 7
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Translocon Declogger Ste24 Protects against IAPP Oligomer-Induced Proteotoxicity. Kayatekin C, Amasino A, Gaglia G, Flannick J, Bonner JM, Fanning S, Narayan P, Barrasa MI, Pincus D, Landgraf D, Nelson J, Hesse WR, Costanzo M, AMP T2D-GENES Consortium, Myers CL, Boone C, Florez JC, Lindquist S Cell 29526462 Cell 2018 Mar 22
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Chaperone AMPylation modulates aggregation and toxicity of neurodegenerative disease-associated polypeptides. Truttmann MC, Pincus D, Ploegh HL Proceedings of the National Academy of Sciences of the United States of America 29760078 Proc Natl Acad Sci U S A 2018 May 29
Defining the Essential Function of Yeast Hsf1 Reveals a Compact Transcriptional Program for Maintaining Eukaryotic Proteostasis. Solís EJ, Pandey JP, Zheng X, Jin DX, Gupta PB, Airoldi EM, Pincus D, Denic V Molecular cell 27320198 Mol Cell 2016 Jul 7
m(6)A modification of a 3' UTR site reduces RME1 mRNA levels to promote meiosis. Bushkin GG, Pincus D, Morgan JT, Richardson K, Lewis C, Chan SH, Bartel DP, Fink GR Nature communications 31363087 Nat Commun 2019 Jul 30
Heat Shock Factor 1 Drives Intergenic Association of Its Target Gene Loci upon Heat Shock. Chowdhary S, Kainth AS, Pincus D, Gross DS Cell reports 30605674 Cell Rep 2019 Jan 2
Multi-kinase control of environmental stress responsive transcription. Mace K, Krakowiak J, El-Samad H, Pincus D PloS one 32160258 PLoS One 2020
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Hsf1 Phosphorylation Generates Cell-to-Cell Variation in Hsp90 Levels and Promotes Phenotypic Plasticity. Zheng X, Beyzavi A, Krakowiak J, Patel N, Khalil AS, Pincus D Cell reports 29562166 Cell Rep 2018 Mar 20
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Subcellular localization of the J-protein Sis1 regulates the heat shock response. Feder ZA, Ali A, Singh A, Krakowiak J, Zheng X, Bindokas VP, Wolfgeher D, Kron SJ, Pincus D The Journal of cell biology 33326013 J Cell Biol 2021 Jan 4
Persistent Activation of mRNA Translation by Transient Hsp90 Inhibition. Tsvetkov P, Eisen TJ, Heinrich SU, Brune Z, Hallacli E, Newby GA, Kayatekin C, Pincus D, Lindquist S Cell reports 32783929 Cell Rep 2020 Aug 11
tRNA thiolation links translation to stress responses in Saccharomyces cerevisiae. Damon JR, Pincus D, Ploegh HL Molecular biology of the cell 25392298 Mol Biol Cell 2015 Jan 15
An evolution-based strategy for engineering allosteric regulation. Pincus D, Resnekov O, Reynolds KA Physical biology 28266924 Phys Biol 2017 Apr 28
Blue light receptor CRY1 regulates HSFA1d nuclear localization to promote plant thermotolerance. Gao J, Zhang R, Zheng L, Song L, Ji M, Li S, Wang J, Yang J, Kang G, Zhang P, Shi Y, Jiao Y, Pincus D, Zheng X Cell reports 37703177 Cell Rep 2023 Sep 26
Multi-tiered genomic analysis of head and neck cancer ties TP53 mutation to 3p loss. Gross AM, Orosco RK, Shen JP, Egloff AM, Carter H, Hofree M, Choueiri M, Coffey CS, Lippman SM, Hayes DN, Cohen EE, Grandis JR, Nguyen QT, Ideker T Nature genetics 25086664 Nat Genet 2014 Sep
Interaction Landscape of Inherited Polymorphisms with Somatic Events in Cancer. Carter H, Marty R, Hofree M, Gross AM, Jensen J, Fisch KM, Wu X, DeBoever C, Van Nostrand EL, Song Y, Wheeler E, Kreisberg JF, Lippman SM, Yeo GW, Gutkind JS, Ideker T Cancer discovery 28188128 Cancer Discov 2017 Apr
Elevated neoantigen levels in tumors with somatic mutations in the HLA-A, HLA-B, HLA-C and B2M genes. Castro A, Ozturk K, Pyke RM, Xian S, Zanetti M, Carter H BMC medical genomics 31345234 BMC Med Genomics 2019 Jul 25
MHC-I genotype drives early immune selection of oncogenic mutations. Marty R, de Prisco N, Carter H, Font-Burgada J Molecular & cellular oncology 29487895 Mol Cell Oncol 2018
Challenges in identifying cancer genes by analysis of exome sequencing data. Hofree M, Carter H, Kreisberg JF, Bandyopadhyay S, Mischel PS, Friend S, Ideker T Nature communications 27417679 Nat Commun 2016 Jul 15
Integrating molecular networks with genetic variant interpretation for precision medicine. Capriotti E, Ozturk K, Carter H Wiley interdisciplinary reviews. Systems biology and medicine 30548534 Wiley Interdiscip Rev Syst Biol Med 2019 May
Epigenetic aging signatures in mice livers are slowed by dwarfism, calorie restriction and rapamycin treatment. Wang T, Tsui B, Kreisberg JF, Robertson NA, Gross AM, Yu MK, Carter H, Brown-Borg HM, Adams PD, Ideker T Genome biology 28351423 Genome Biol 2017 Mar 28
Modeling of RAS complexes supports roles in cancer for less studied partners. Engin HB, Carlin D, Pratt D, Carter H BMC biophysics 28815022 BMC Biophys 2017
The Emerging Potential for Network Analysis to Inform Precision Cancer Medicine. Ozturk K, Dow M, Carlin DE, Bejar R, Carter H Journal of molecular biology 29908887 J Mol Biol 2018 Sep 14
Identifying mutation specific cancer pathways using a structurally resolved protein interaction network. Engin HB, Hofree M, Carter H Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 25592571 Pac Symp Biocomput 2015
Computational KIR copy number discovery reveals interaction between inhibitory receptor burden and survival. Pyke RM, Genolet R, Harari A, Coukos G, Gfeller D, Carter H Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 30864318 Pac Symp Biocomput 2019
Extracting allelic read counts from 250,000 human sequencing runs in Sequence Read Archive. Tsui B, Dow M, Skola D, Carter H Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 30864322 Pac Symp Biocomput 2019
MHC-I Genotype Restricts the Oncogenic Mutational Landscape. Marty R, Kaabinejadian S, Rossell D, Slifker MJ, van de Haar J, Engin HB, de Prisco N, Ideker T, Hildebrand WH, Font-Burgada J, Carter H Cell 29107334 Cell 2017 Nov 30
Activation of NF-κB and p300/CBP potentiates cancer chemoimmunotherapy through induction of MHC-I antigen presentation. Zhou Y, Bastian IN, Long MD, Dow M, Li W, Liu T, Ngu RK, Antonucci L, Huang JY, Phung QT, Zhao XH, Banerjee S, Lin XJ, Wang H, Dang B, Choi S, Karin D, Su H, Ellisman MH, Jamieson C, Bosenberg M, Cheng Z, Haybaeck J, Kenner L, Fisch KM, Bourgon R, Hernandez G, Lill JR, Liu S, Carter H, Mellman I, Karin M, Shalapour S Proceedings of the National Academy of Sciences of the United States of America 33602823 Proc Natl Acad Sci U S A 2021 Feb 23
Pan-cancer analysis reveals technical artifacts in TCGA germline variant calls. Buckley AR, Standish KA, Bhutani K, Ideker T, Lasken RS, Carter H, Harismendy O, Schork NJ BMC genomics 28606096 BMC Genomics 2017 Jun 12
Common genetic variation in the germline influences where and how tumors develop. Carter H, Ideker T Molecular & cellular oncology 28616579 Mol Cell Oncol 2017
Immune DNA signature of T-cell infiltration in breast tumor exomes. Levy E, Marty R, Gárate Calderón V, Woo B, Dow M, Armisen R, Carter H, Harismendy O Scientific reports 27452728 Sci Rep 2016 Jul 25
A global transcriptional network connecting noncoding mutations to changes in tumor gene expression. Zhang W, Bojorquez-Gomez A, Velez DO, Xu G, Sanchez KS, Shen JP, Chen K, Licon K, Melton C, Olson KM, Yu MK, Huang JK, Carter H, Farley EK, Snyder M, Fraley SI, Kreisberg JF, Ideker T Nature genetics 29610481 Nat Genet 2018 Apr
Evolutionary Pressure against MHC Class II Binding Cancer Mutations. Marty Pyke R, Thompson WK, Salem RM, Font-Burgada J, Zanetti M, Carter H Cell 30245014 Cell 2018 Oct 4
IRE1α regulates macrophage polarization, PD-L1 expression, and tumor survival. Batista A, Rodvold JJ, Xian S, Searles SC, Lew A, Iwawaki T, Almanza G, Waller TC, Lin J, Jepsen K, Carter H, Zanetti M PLoS biology 32520957 PLoS Biol 2020 Jun
The RUNX1-ETO target gene RASSF2 suppresses t(8;21) AML development and regulates Rac GTPase signaling. Stoner SA, Liu KTH, Andrews ET, Liu M, Arimoto KI, Yan M, Davis AG, Weng S, Dow M, Xian S, DeKelver RC, Carter H, Zhang DE Blood cancer journal 32029705 Blood Cancer J 2020 Feb 6
Predicting functional consequences of mutations using molecular interaction network features. Ozturk K, Carter H Human genetics 34432150 Hum Genet 2022 Jun
Increasing metadata coverage of SRA BioSample entries using deep learning-based named entity recognition. Klie A, Tsui BY, Mollah S, Skola D, Dow M, Hsu CN, Carter H Database : the journal of biological databases and curation 33914028 Database (Oxford) 2021 Apr 29
Germline and Somatic Genetic Variants in the p53 Pathway Interact to Affect Cancer Risk, Progression, and Drug Response. Zhang P, Kitchen-Smith I, Xiong L, Stracquadanio G, Brown K, Richter PH, Wallace MD, Bond E, Sahgal N, Moore S, Nornes S, De Val S, Surakhy M, Sims D, Wang X, Bell DA, Zeron-Medina J, Jiang Y, Ryan AJ, Selfe JL, Shipley J, Kar S, Pharoah PD, Loveday C, Jansen R, Grochola LF, Palles C, Protheroe A, Millar V, Ebner DV, Pagadala M, Blagden SP, Maughan TS, Domingo E, Tomlinson I, Turnbull C, Carter H, Bond GL Cancer research 33558336 Cancer Res 2021 Apr 1
Identifying Driver Interfaces Enriched for Somatic Missense Mutations in Tumors. Ozturk K, Carter H Methods in molecular biology (Clifton, N.J.) 30542990 Methods Mol Biol 2019
Integrative genomic analysis of mouse and human hepatocellular carcinoma. Dow M, Pyke RM, Tsui BY, Alexandrov LB, Nakagawa H, Taniguchi K, Seki E, Harismendy O, Shalapour S, Karin M, Carter H, Font-Burgada J Proceedings of the National Academy of Sciences of the United States of America 30287485 Proc Natl Acad Sci U S A 2018 Oct 16
Structure-Based Analysis Reveals Cancer Missense Mutations Target Protein Interaction Interfaces. Engin HB, Kreisberg JF, Carter H PloS one 27043210 PLoS One 2016
3D collagen architecture induces a conserved migratory and transcriptional response linked to vasculogenic mimicry. Velez DO, Tsui B, Goshia T, Chute CL, Han A, Carter H, Fraley SI Nature communications 29162797 Nat Commun 2017 Nov 21
MHC-I genotype and tumor mutational burden predict response to immunotherapy. Goodman AM, Castro A, Pyke RM, Okamura R, Kato S, Riviere P, Frampton G, Sokol E, Zhang X, Ball ED, Carter H, Kurzrock R Genome medicine 32430031 Genome Med 2020 May 19
Indigenous bacteria from the gut microbiota regulate host serotonin biosynthesis. Yano JM, Yu K, Donaldson GP, Shastri GG, Ann P, Ma L, Nagler CR, Ismagilov RF, Mazmanian SK, Hsiao EY Cell 25860609 Cell 2015 Apr 9
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The Gut Microbiota Mediates the Anti-Seizure Effects of the Ketogenic Diet. Olson CA, Vuong HE, Yano JM, Liang QY, Nusbaum DJ, Hsiao EY Cell 30007420 Cell 2018 Jul 12
Defining Dysbiosis in Disorders of Movement and Motivation. Fields CT, Sampson TR, Bruce-Keller AJ, Kiraly DD, Hsiao EY, de Vries GJ The Journal of neuroscience : the official journal of the Society for Neuroscience 30381433 J Neurosci 2018 Oct 31
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Changes in Weight Status and the Intestinal Microbiota Among College Freshman, Aged 18 Years. Journey EK, Ortega-Santos CP, Bruening M, Whisner CM The Journal of adolescent health : official publication of the Society for Adolescent Medicine 31477511 J Adolesc Health 2020 Feb
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Association of food insecurity on gut microbiome and metabolome profiles in a diverse college-based sample. Mohr AE, Jasbi P, Vander Wyst KB, van Woerden I, Shi X, Gu H, Whisner CM, Bruening M Scientific reports 35999348 Sci Rep 2022 Aug 23
Hungry to learn: the prevalence and effects of food insecurity on health behaviors and outcomes over time among a diverse sample of university freshmen. Bruening M, van Woerden I, Todd M, Laska MN The international journal of behavioral nutrition and physical activity 29347963 Int J Behav Nutr Phys Act 2018 Jan 18
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Microbial Ecology and Metabolism of Emerging Adulthood: Gut Microbiome Insights from a College Freshman Cohort. Mohr AE, Jasbi P, van Woerden I, Chi J, Gu H, Bruening M, Whisner CM Gut microbes reports 39221110 Gut Microbes Rep 2024
A Mobile Ecological Momentary Assessment Tool (devilSPARC) for Nutrition and Physical Activity Behaviors in College Students: A Validation Study. Bruening M, van Woerden I, Todd M, Brennhofer S, Laska MN, Dunton G Journal of medical Internet research 27465701 J Med Internet Res 2016 Jul 27
The Struggle Is Real: A Systematic Review of Food Insecurity on Postsecondary Education Campuses. Bruening M, Argo K, Payne-Sturges D, Laska MN Journal of the Academy of Nutrition and Dietetics 28754200 J Acad Nutr Diet 2017 Nov
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Factors Related to the High Rates of Food Insecurity among Diverse, Urban College Freshmen. Bruening M, Brennhofer S, van Woerden I, Todd M, Laska M Journal of the Academy of Nutrition and Dietetics 27212147 J Acad Nutr Diet 2016 Sep
Food Insecure College Students and Objective Measurements of Their Unused Meal Plans. van Woerden I, Hruschka D, Vega-Lόpez S, Schaefer DR, Adams M, Bruening M Nutrients 31018554 Nutrients 2019 Apr 23
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Finding and Keeping Friends in College and Their Influence on Alcohol Use: A Network Analysis. Schaefer DR, Van Woerden I, Hruschka D, Bruening M Journal of studies on alcohol and drugs 33573730 J Stud Alcohol Drugs 2021 Jan
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Diet, physical activity and screen time but not body mass index are associated with the gut microbiome of a diverse cohort of college students living in university housing: a cross-sectional study. Whisner CM, Maldonado J, Dente B, Krajmalnik-Brown R, Bruening M BMC microbiology 30541450 BMC Microbiol 2018 Dec 12
Weight Shame, Social Connection, and Depressive Symptoms in Late Adolescence. Brewis AA, Bruening M International journal of environmental research and public health 29723962 Int J Environ Res Public Health 2018 May 1
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Divergence in the metabolome between natural aging and Alzheimer's disease. Hunsberger HC, Greenwood BP, Tolstikov V, Narain NR, Kiebish MA, Denny CA Scientific reports 32699218 Sci Rep 2020 Jul 22
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Nanomedical engineering: shaping future nanomedicines. Luo D, Carter KA, Lovell JF Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology 25377691 Wiley Interdiscip Rev Nanomed Nanobiotechnol 2015 Mar-Apr
Pd-porphyrin-cross-linked implantable hydrogels with oxygen-responsive phosphorescence. Huang H, Song W, Chen G, Reynard JM, Ohulchanskyy TY, Prasad PN, Bright FV, Lovell JF Advanced healthcare materials 24259519 Adv Healthc Mater 2014 Jun
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Multifunctional Liposomes for Image-Guided Intratumoral Chemo-Phototherapy. Miranda D, Carter K, Luo D, Shao S, Geng J, Li C, Chitgupi U, Turowski SG, Li N, Atilla-Gokcumen GE, Spernyak JA, Lovell JF Advanced healthcare materials 28504409 Adv Healthc Mater 2017 Aug
Immunogenicity of the Lyme disease antigen OspA, particleized by cobalt porphyrin-phospholipid liposomes. Federizon J, Frye A, Huang WC, Hart TM, He X, Beltran C, Marcinkiewicz AL, Mainprize IL, Wills MKB, Lin YP, Lovell JF Vaccine 31727504 Vaccine 2020 Jan 22
Surfactant-stripped naphthalocyanines for multimodal tumor theranostics with upconversion guidance cream. Zhang Y, Hong H, Sun B, Carter K, Qin Y, Wei W, Wang D, Jeon M, Geng J, Nickles RJ, Chen G, Prasad PN, Kim C, Xia J, Cai W, Lovell JF Nanoscale 28247896 Nanoscale 2017 Mar 9
Intrabilayer (64)Cu Labeling of Photoactivatable, Doxorubicin-Loaded Stealth Liposomes. Luo D, Goel S, Liu HJ, Carter KA, Jiang D, Geng J, Kutyreff CJ, Engle JW, Huang WC, Shao S, Fang C, Cai W, Lovell JF ACS nano 29195037 ACS Nano 2017 Dec 26
Enhanced drug delivery using sonoactivatable liposomes with membrane-embedded porphyrins. Wang X, Yan F, Liu X, Wang P, Shao S, Sun Y, Sheng Z, Liu Q, Lovell JF, Zheng H Journal of controlled release : official journal of the Controlled Release Society 30075210 J Control Release 2018 Sep 28
Blood Interactions, Pharmacokinetics, and Depth-Dependent Ablation of Rat Mammary Tumors with Photoactivatable, Liposomal Doxorubicin. Carter KA, Luo D, Geng J, Stern ST, Lovell JF Molecular cancer therapeutics 30587558 Mol Cancer Ther 2019 Mar
Ingestible roasted barley for contrast-enhanced photoacoustic imaging in animal and human subjects. Wang D, Lee DH, Huang H, Vu T, Lim RSA, Nyayapathi N, Chitgupi U, Liu M, Geng J, Xia J, Lovell JF Biomaterials 29803105 Biomaterials 2018 Aug
Short Drug-Light Intervals Improve Liposomal Chemophototherapy in Mice Bearing MIA PaCa-2 Xenografts. Luo D, Carter KA, Geng J, He X, Lovell JF Molecular pharmaceutics 29608312 Mol Pharm 2018 Sep 4
Emerging applications of porphyrins in photomedicine. Huang H, Song W, Rieffel J, Lovell JF Frontiers in physics 28553633 Front Phys 2015 Apr
Surfactant-Stripped Frozen Pheophytin Micelles for Multimodal Gut Imaging. Zhang Y, Wang D, Goel S, Sun B, Chitgupi U, Geng J, Sun H, Barnhart TE, Cai W, Xia J, Lovell JF Advanced materials (Deerfield Beach, Fla.) 27396479 Adv Mater 2016 Oct
Recent applications of phthalocyanines and naphthalocyanines for imaging and therapy. Zhang Y, Lovell JF Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology 27439671 Wiley Interdiscip Rev Nanomed Nanobiotechnol 2017 Jan
A surfactant-stripped cabazitaxel micelle formulation optimized with accelerated storage stability. Sun B, Jing H, Mabrouk MT, Zhang Y, Jin H, Lovell JF Pharmaceutical development and technology 32892678 Pharm Dev Technol 2020 Dec
Sulfonated Polyethylenimine for Photosensitizer Conjugation and Targeting. Chitgupi U, Zhang Y, Lo CY, Shao S, Song W, Geng J, Neelamegham S, Lovell JF Bioconjugate chemistry 26057017 Bioconjug Chem 2015 Aug 19
Implantable Tin Porphyrin-PEG Hydrogels with pH-Responsive Fluorescence. Huang H, Chauhan S, Geng J, Qin Y, Watson DF, Lovell JF Biomacromolecules 28146351 Biomacromolecules 2017 Feb 13
Porphyrin-phospholipid liposomes permeabilized by near-infrared light. Carter KA, Shao S, Hoopes MI, Luo D, Ahsan B, Grigoryants VM, Song W, Huang H, Zhang G, Pandey RK, Geng J, Pfeifer BA, Scholes CP, Ortega J, Karttunen M, Lovell JF Nature communications 24699423 Nat Commun 2014 Apr 3
Hexamodal imaging with porphyrin-phospholipid-coated upconversion nanoparticles. Rieffel J, Chen F, Kim J, Chen G, Shao W, Shao S, Chitgupi U, Hernandez R, Graves SA, Nickles RJ, Prasad PN, Kim C, Cai W, Lovell JF Advanced materials (Deerfield Beach, Fla.) 25640213 Adv Mater 2015 Mar 11
A porphyrin-PEG polymer with rapid renal clearance. Huang H, Hernandez R, Geng J, Sun H, Song W, Chen F, Graves SA, Nickles RJ, Cheng C, Cai W, Lovell JF Biomaterials 26517562 Biomaterials 2016 Jan
Directed vaccination against pneumococcal disease. Li Y, Hill A, Beitelshees M, Shao S, Lovell JF, Davidson BA, Knight PR 3rd, Hakansson AP, Pfeifer BA, Jones CH Proceedings of the National Academy of Sciences of the United States of America 27274071 Proc Natl Acad Sci U S A 2016 Jun 21
Indocyanine green binds to DOTAP liposomes for enhanced optical properties and tumor photoablation. Miranda D, Wan C, Kilian HI, Mabrouk MT, Zhou Y, Jin H, Lovell JF Biomaterials science 31232421 Biomater Sci 2019 Aug 1
Naphthalocyanines as contrast agents for photoacoustic and multimodal imaging. Chitgupi U, Lovell JF Biomedical engineering letters 30603204 Biomed Eng Lett 2018 May
Surfactant-Stripped Pheophytin Micelles for Multimodal Tumor Imaging and Photodynamic Therapy. Moukheiber D, Chitgupi U, Carter KA, Luo D, Sun B, Goel S, Ferreira CA, Engle JW, Wang D, Geng J, Zhang Y, Xia J, Cai W, Lovell JF ACS applied bio materials 31853516 ACS Appl Bio Mater 2019 Jan 22
Clinical development and potential of photothermal and photodynamic therapies for cancer. Li X, Lovell JF, Yoon J, Chen X Nature reviews. Clinical oncology 32699309 Nat Rev Clin Oncol 2020 Nov
Therapeutic surfactant-stripped frozen micelles. Zhang Y, Song W, Geng J, Chitgupi U, Unsal H, Federizon J, Rzayev J, Sukumaran DK, Alexandridis P, Lovell JF Nature communications 27193558 Nat Commun 2016 May 19
Folate-Targeted Nanoliposomal Chemophototherapy. Chitgupi U, Qin Y, Ghosh S, Quinn B, Carter K, He X, Sunar U, Lovell JF Pharmaceutics 37896144 Pharmaceutics 2023 Sep 26
Vessel-Targeted Chemophototherapy with Cationic Porphyrin-Phospholipid Liposomes. Luo D, Geng J, Li N, Carter KA, Shao S, Atilla-Gokcumen GE, Lovell JF Molecular cancer therapeutics 28729400 Mol Cancer Ther 2017 Nov
Sphingomyelin Liposomes Containing Porphyrin-phospholipid for Irinotecan Chemophototherapy. Carter KA, Luo D, Razi A, Geng J, Shao S, Ortega J, Lovell JF Theranostics 27877238 Theranostics 2016
Design of Hydrated Porphyrin-Phospholipid Bilayers with Enhanced Magnetic Resonance Contrast. Shao S, Do TN, Razi A, Chitgupi U, Geng J, Alsop RJ, Dzikovski BG, Rheinstädter MC, Ortega J, Karttunen M, Spernyak JA, Lovell JF Small (Weinheim an der Bergstrasse, Germany) 27739249 Small 2017 Jan
Bimodal Targeting Using Sulfonated, Mannosylated PEI for Combined Gene Delivery and Photodynamic Therapy. Chitgupi U, Li Y, Chen M, Shao S, Beitelshees M, Tan MJ, Neelamegham S, Pfeifer BA, Jones C, Lovell JF Photochemistry and photobiology 27935058 Photochem Photobiol 2017 Mar
Assessing Photosensitizer Targeting Using Meso-Tetra(Carboxyphenyl) Porphyrin. Chitgupi U, Lovell JF, Rajendiran V Molecules (Basel, Switzerland) 29649139 Molecules 2018 Apr 12
A malaria vaccine adjuvant based on recombinant antigen binding to liposomes. Huang WC, Deng B, Lin C, Carter KA, Geng J, Razi A, He X, Chitgupi U, Federizon J, Sun B, Long CA, Ortega J, Dutta S, King CR, Miura K, Lee SM, Lovell JF Nature nanotechnology 30297818 Nat Nanotechnol 2018 Dec
An Engineered Biomimetic MPER Peptide Vaccine Induces Weakly HIV Neutralizing Antibodies in Mice. Shao S, Huang WC, Lin C, Hicar MD, LaBranche CC, Montefiori DC, Lovell JF Annals of biomedical engineering 31832930 Ann Biomed Eng 2020 Jul
Binding of an amphiphilic phthalocyanine to pre-formed liposomes confers light-triggered cargo release. Macháček M, Carter KA, Kostelanský F, Miranda D, Seffouh A, Ortega J, Šimůnek T, Zimčík P, Lovell JF Journal of materials chemistry. B 30984399 J Mater Chem B 2018 Nov 28
Metalloporphyrin Nanoparticles: Coordinating Diverse Theranostic Functions. Shao S, Rajendiran V, Lovell JF Coordination chemistry reviews 30559508 Coord Chem Rev 2019 Jan 15
Advanced Functional Nanomaterials for Theranostics. Huang H, Lovell JF Advanced functional materials 28824357 Adv Funct Mater 2017 Jan 12
Loading and Releasing Ciprofloxacin in Photoactivatable Liposomes. Ghosh S, Qi R, Carter KA, Zhang G, Pfeifer BA, Lovell JF Biochemical engineering journal 31105464 Biochem Eng J 2019 Jan 15
Photoactivation of sulfonated polyplexes enables localized gene silencing by DsiRNA in breast cancer cells. Puri A, Viard M, Zakrevsky P, Zampino S, Chen A, Isemann C, Alvi S, Clogston J, Chitgupi U, Lovell JF, Shapiro BA Nanomedicine : nanotechnology, biology, and medicine 32151748 Nanomedicine 2020 Jun
Antibody response of a particle-inducing, liposome vaccine adjuvant admixed with a Pfs230 fragment. Huang WC, Deng B, Seffouh A, Ortega J, Long CA, Suresh RV, He X, Miura K, Lee SM, Wu Y, Lovell JF NPJ vaccines 32218995 NPJ Vaccines 2020
Non-invasive multimodal functional imaging of the intestine with frozen micellar naphthalocyanines. Zhang Y, Jeon M, Rich LJ, Hong H, Geng J, Zhang Y, Shi S, Barnhart TE, Alexandridis P, Huizinga JD, Seshadri M, Cai W, Kim C, Lovell JF Nature nanotechnology 24997526 Nat Nanotechnol 2014 Aug
Membrane Disruption by Very Long Chain Fatty Acids during Necroptosis. Parisi LR, Sowlati-Hashjin S, Berhane IA, Galster SL, Carter KA, Lovell JF, Chemler SR, Karttunen M, Atilla-Gokcumen GE ACS chemical biology 31490656 ACS Chem Biol 2019 Oct 18
Liposomal formulations of photosensitizers. Ghosh S, Carter KA, Lovell JF Biomaterials 31336279 Biomaterials 2019 Oct
Antigen Engineering Approaches for Lyme Disease Vaccines. Federizon J, Lin YP, Lovell JF Bioconjugate chemistry 30987418 Bioconjug Chem 2019 May 15
Functionalization of cobalt porphyrin-phospholipid bilayers with his-tagged ligands and antigens. Shao S, Geng J, Ah Yi H, Gogia S, Neelamegham S, Jacobs A, Lovell JF Nature chemistry 25901823 Nat Chem 2015 May
Highly-Soluble Cyanine J-aggregates Entrapped by Liposomes for In Vivo Optical Imaging around 930 nm. Miranda D, Huang H, Kang H, Zhan Y, Wang D, Zhou Y, Geng J, Kilian HI, Stiles W, Razi A, Ortega J, Xia J, Choi HS, Lovell JF Theranostics 30809281 Theranostics 2019
Axial PEGylation of Tin Octabutoxy Naphthalocyanine Extends Blood Circulation for Photoacoustic Vascular Imaging. Huang H, Wang D, Zhang Y, Zhou Y, Geng J, Chitgupi U, Cook TR, Xia J, Lovell JF Bioconjugate chemistry 27259401 Bioconjug Chem 2016 Jul 20
Dual-color photoacoustic lymph node imaging using nanoformulated naphthalocyanines. Lee C, Kim J, Zhang Y, Jeon M, Liu C, Song L, Lovell JF, Kim C Biomaterials 26408999 Biomaterials 2015 Dec
Doxorubicin encapsulated in stealth liposomes conferred with light-triggered drug release. Luo D, Carter KA, Razi A, Geng J, Shao S, Giraldo D, Sunar U, Ortega J, Lovell JF Biomaterials 26513413 Biomaterials 2016 Jan
Pharmacokinetics and pharmacodynamics of liposomal chemophototherapy with short drug-light intervals. Luo D, Carter KA, Molins EAG, Straubinger NL, Geng J, Shao S, Jusko WJ, Straubinger RM, Lovell JF Journal of controlled release : official journal of the Controlled Release Society 30684512 J Control Release 2019 Mar 10
Reversible Micro- and Nano- Phase Programming of Anthraquinone Thermochromism Using Blended Block Copolymers. Zhang Y, Lovell JF Langmuir : the ACS journal of surfaces and colloids 26626998 Langmuir 2015 Dec 22
Slit-enabled linear-array photoacoustic tomography with near isotropic spatial resolution in three dimensions. Wang Y, Wang D, Zhang Y, Geng J, Lovell JF, Xia J Optics letters 26696175 Opt Lett 2016 Jan 1
Metal Chelation Modulates Phototherapeutic Properties of Mitoxantrone-Loaded Porphyrin-Phospholipid Liposomes. Carter KA, Wang S, Geng J, Luo D, Shao S, Lovell JF Molecular pharmaceutics 26691879 Mol Pharm 2016 Feb 1
A Phosphorus Phthalocyanine Formulation with Intense Absorbance at 1000 nm for Deep Optical Imaging. Zhou Y, Wang D, Zhang Y, Chitgupi U, Geng J, Wang Y, Zhang Y, Cook TR, Xia J, Lovell JF Theranostics 27022416 Theranostics 2016
Rapid Light-Triggered Drug Release in Liposomes Containing Small Amounts of Unsaturated and Porphyrin-Phospholipids. Luo D, Li N, Carter KA, Lin C, Geng J, Shao S, Huang WC, Qin Y, Atilla-Gokcumen GE, Lovell JF Small (Weinheim an der Bergstrasse, Germany) 27121003 Small 2016 Jun
Mechanisms of Light-induced Liposome Permeabilization. Miranda D, Lovell JF Bioengineering & translational medicine 28367505 Bioeng Transl Med 2016 Sep
Chemophototherapy: An Emerging Treatment Option for Solid Tumors. Luo D, Carter KA, Miranda D, Lovell JF Advanced science (Weinheim, Baden-Wurttemberg, Germany) 28105389 Adv Sci (Weinh) 2017 Jan
Coherent-weighted three-dimensional image reconstruction in linear-array-based photoacoustic tomography. Wang D, Wang Y, Zhou Y, Lovell JF, Xia J Biomedical optics express 27231634 Biomed Opt Express 2016 May 1
Trans-illumination intestine projection imaging of intestinal motility in mice. Wang D, Zhang H, Vu T, Zhan Y, Malhotra A, Wang P, Chitgupi U, Rai A, Zhang S, Wang L, Huizinga JD, Lovell JF, Xia J Nature communications 33727562 Nat Commun 2021 Mar 16
Facile formulation of a long-wavelength cyanine for optical imaging in the second near-infrared window. Kilian HI , Kang H , Nyayapathi N , Fukuda T , Adluru E , Zhang H , Quinn B , Xia J , Choi HS , Lovell JF Biomaterials science 32515752 Biomater Sci 2020 Aug 7
Engineered Nanoparticle Applications for Recombinant Influenza Vaccines. Sia ZR, Miller MS, Lovell JF Molecular pharmaceutics 32787280 Mol Pharm 2021 Feb 1
Surfactant-Stripped Micelles for NIR-II Photoacoustic Imaging through 12 cm of Breast Tissue and Whole Human Breasts. Chitgupi U, Nyayapathi N, Kim J, Wang D, Sun B, Li C, Carter K, Huang WC, Kim C, Xia J, Lovell JF Advanced materials (Deerfield Beach, Fla.) 31414515 Adv Mater 2019 Oct
Sound Out the Deep Colors: Photoacoustic Molecular Imaging at New Depths. Li M, Nyayapathi N, Kilian HI, Xia J, Lovell JF, Yao J Molecular imaging 33336621 Mol Imaging 2020 Jan-Dec
Reducing prognostic errors: a new imperative in quality healthcare. Khullar D, Jena AB BMJ (Clinical research ed.) 26993146 BMJ 2016 Mar 18
The Impact of the US Food and Drug Administration Chlorofluorocarbon Ban on Out-of-pocket Costs and Use of Albuterol Inhalers Among Individuals With Asthma. Jena AB, Ho O, Goldman DP, Karaca-Mandic P JAMA internal medicine 25962128 JAMA Intern Med 2015 Jul
Incidence of sexually transmitted infections after human papillomavirus vaccination among adolescent females. Jena AB, Goldman DP, Seabury SA JAMA internal medicine 25664968 JAMA Intern Med 2015 Apr
Opioid prescribing by multiple providers in Medicare: retrospective observational study of insurance claims. Jena AB, Goldman D, Weaver L, Karaca-Mandic P BMJ (Clinical research ed.) 24553363 BMJ 2014 Feb 19
College affirmative action bans and smoking and alcohol use among underrepresented minority adolescents in the United States: A difference-in-differences study. Venkataramani AS, Cook E, O'Brien RL, Kawachi I, Jena AB, Tsai AC PLoS medicine 31211777 PLoS Med 2019 Jun
Longitudinal analyses of gender differences in first authorship publications related to COVID-19. Lerchenmüller C, Schmallenbach L, Jena AB, Lerchenmueller MJ BMJ open 33820790 BMJ Open 2021 Apr 5
Identifying outlier patterns of inconsistent ambulance billing in Medicare. Sanghavi P, Jena AB, Newhouse JP, Zaslavsky AM Health services research 33492665 Health Serv Res 2021 Apr
The association between physician turnover (the "July Effect") and survival after in-hospital cardiac arrest. Myers L, Mikhael B, Currier P, Berg K, Jena A, Donnino M, Andersen LW, American Heart Association’s Get with the Guidelines-Resuscitation Investigators Resuscitation 28285032 Resuscitation 2017 May
Opioid-Prescribing Patterns of Emergency Physicians and Risk of Long-Term Use. Barnett ML, Olenski AR, Jena AB The New England journal of medicine 28199807 N Engl J Med 2017 Feb 16
Patient Mortality During Unannounced Accreditation Surveys at US Hospitals. Barnett ML, Olenski AR, Jena AB JAMA internal medicine 28319229 JAMA Intern Med 2017 May 1
Attention Deficit-Hyperactivity Disorder and Month of School Enrollment. Layton TJ, Barnett ML, Hicks TR, Jena AB The New England journal of medicine 30485780 N Engl J Med 2018 Nov 29
Association Between Playing American Football in the National Football League and Long-term Mortality. Venkataramani AS, Gandhavadi M, Jena AB JAMA 29392304 JAMA 2018 Feb 27
Acute Myocardial Infarction Mortality During Dates of National Interventional Cardiology Meetings. Jena AB, Olenski A, Blumenthal DM, Yeh RW, Goldman DP, Romley J Journal of the American Heart Association 29523525 J Am Heart Assoc 2018 Mar 9
Association of Overlapping Surgery With Perioperative Outcomes. Sun E, Mello MM, Rishel CA, Vaughn MT, Kheterpal S, Saager L, Fleisher LA, Damrose EJ, Kadry B, Jena AB, Multicenter Perioperative Outcomes Group (MPOG) JAMA 30806696 JAMA 2019 Feb 26
Screening Mammography for Free: Impact of Eliminating Cost Sharing on Cancer Screening Rates. Jena AB, Huang J, Fireman B, Fung V, Gazelle S, Landrum MB, Chernew M, Newhouse JP, Hsu J Health services research 26990550 Health Serv Res 2017 Feb
Comparison of Hospital Mortality and Readmission Rates for Medicare Patients Treated by Male vs Female Physicians. Tsugawa Y, Jena AB, Figueroa JF, Orav EJ, Blumenthal DM, Jha AK JAMA internal medicine 27992617 JAMA Intern Med 2017 Feb 1
Reducing Diagnostic Errors--Why Now? Khullar D, Jha AK, Jena AB The New England journal of medicine 26397948 N Engl J Med 2015 Dec 24
Physician spending and subsequent risk of malpractice claims: observational study. Jena AB, Schoemaker L, Bhattacharya J, Seabury SA BMJ (Clinical research ed.) 26538498 BMJ 2015 Nov 4
Rates and Characteristics of Paid Malpractice Claims Among US Physicians by Specialty, 1992-2014. Schaffer AC, Jena AB, Seabury SA, Singh H, Chalasani V, Kachalia A JAMA internal medicine 28346582 JAMA Intern Med 2017 May 1
Does Medical Malpractice Law Improve Health Care Quality? Frakes M, Jena AB Journal of public economics 28479642 J Public Econ 2016 Nov
Association Between Treatment by Locum Tenens Internal Medicine Physicians and 30-Day Mortality Among Hospitalized Medicare Beneficiaries. Blumenthal DM, Olenski AR, Tsugawa Y, Jena AB JAMA 29209722 JAMA 2017 Dec 5
Association between rainfall and diagnoses of joint or back pain: retrospective claims analysis. Jena AB, Olenski AR, Molitor D, Miller N BMJ (Clinical research ed.) 29237605 BMJ 2017 Dec 13
Patterns of Potential Opioid Misuse and Subsequent Adverse Outcomes in Medicare, 2008 to 2012. Carey CM, Jena AB, Barnett ML Annals of internal medicine 29800019 Ann Intern Med 2018 Jun 19
Medical professional liability risk among US cardiologists. Mangalmurti S, Seabury SA, Chandra A, Lakdawalla D, Oetgen WJ, Jena AB American heart journal 24766979 Am Heart J 2014 May
Mortality and treatment patterns among patients hospitalized with acute cardiovascular conditions during dates of national cardiology meetings. Jena AB, Prasad V, Goldman DP, Romley J JAMA internal medicine 25531231 JAMA Intern Med 2015 Feb
Mandatory use of prescription drug monitoring programs. Haffajee RL, Jena AB, Weiner SG JAMA 25622279 JAMA 2015 Mar 3
Authorship Inflation in Medical Publications. Tilak G, Prasad V, Jena AB Inquiry : a journal of medical care organization, provision and financing 26228035 Inquiry 2015
Careful use of science to advance the debate on the UK Cancer Drugs Fund. Lakdawalla DN, Jena AB, Doctor JN JAMA 24381964 JAMA 2014 Jan 1
Utilization of Telemedicine Among Rural Medicare Beneficiaries. Mehrotra A, Jena AB, Busch AB, Souza J, Uscher-Pines L, Landon BE JAMA 27163991 JAMA 2016 May 10
Association between use of warfarin with common sulfonylureas and serious hypoglycemic events: retrospective cohort analysis. Romley JA, Gong C, Jena AB, Goldman DP, Williams B, Peters A BMJ (Clinical research ed.) 26643108 BMJ 2015 Dec 7
Prescription Patterns of Family Members After Discontinued Opioid or Benzodiazepine Therapy of Users. Barnett ML, Hicks TR, Jena AB JAMA internal medicine 31260053 JAMA Intern Med 2019 Sep 1
Trends in the Price per Median and Mean Life-Year Gained Among Newly Approved Cancer Therapies 1995 to 2017. Chen AJ, Hu X, Conti RM, Jena AB, Goldman DP Value in health : the journal of the International Society for Pharmacoeconomics and Outcomes Research 31806195 Value Health 2019 Dec
Association of Grit Scores With Treatment Adherence and Biomarkers in Patients With Type 2 Diabetes. Peña PA, Pérez-Díaz I, Pulido-Ayala AK, Osorio-Landa HK, López-Navarro JM, Duckworth AL, Jena AB JAMA network open 31517961 JAMA Netw Open 2019 Sep 4
Comparison of Anesthesia Times and Billing Patterns by Anesthesia Practitioners. Sun EC, Dutton RP, Jena AB JAMA network open 30646351 JAMA Netw Open 2018 Nov 2
Trends in New Diagnoses of Atrial Fibrillation After Release of an ECG-Capable Smartwatch. Zimerman A, Sheridan B, Cooke S, Jena AB Circulation 32833515 Circulation 2020 Aug 25
Association of a Clinician's Antibiotic-Prescribing Rate With Patients' Future Likelihood of Seeking Care and Receipt of Antibiotics. Shi Z, Barnett ML, Jena AB, Ray KN, Fox KP, Mehrotra A Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 32777032 Clin Infect Dis 2021 Oct 5
The declining demand for hospital care as a rationale for duty hour reform. Jena AB, DePasse JW, Prasad V Journal of general internal medicine 24866469 J Gen Intern Med 2014 Oct
Long-term effects of the 2003 ACGME resident duty hour reform on hospital mortality. Jena AB, Prasad V, Romley JA Mayo Clinic proceedings 24996240 Mayo Clin Proc 2014 Jul
Turning evidence into practice under payment reform: the new frontier of translational science. Jena AB, Stevens W, McWilliams JM Journal of general internal medicine 25092013 J Gen Intern Med 2014 Nov
Does medicine run in the family-evidence from three generations of physicians in Sweden: retrospective observational study. Polyakova M, Persson P, Hofmann K, Jena AB BMJ (Clinical research ed.) 33328192 BMJ 2020 Dec 16
Patient mortality after surgery on the surgeon's birthday: observational study. Kato H, Jena AB, Tsugawa Y BMJ (Clinical research ed.) 34913872 BMJ 2020 Dec 10
Mortality among high-risk patients with acute myocardial infarction admitted to U.S. teaching-intensive hospitals in July: a retrospective observational study. Jena AB, Sun EC, Romley JA Circulation 24152859 Circulation 2013 Dec 24
Does the declining lethality of gunshot injuries mask a rising epidemic of gun violence in the United States? Jena AB, Sun EC, Prasad V Journal of general internal medicine 24452421 J Gen Intern Med 2014 Jul
Variation in Physician Spending and Association With Patient Outcomes. Tsugawa Y, Jha AK, Newhouse JP, Zaslavsky AM, Jena AB JAMA internal medicine 28288254 JAMA Intern Med 2017 May 1
Health and Health Care Use Among Individuals at Risk to Lose Health Insurance With Repeal of the Affordable Care Act. Karaca-Mandic P, Jena AB, Ross JS JAMA internal medicine 28114528 JAMA Intern Med 2017 Apr 1
The Peltzman effect and compensatory markers in medicine. Prasad V, Jena AB Healthcare (Amsterdam, Netherlands) 25396116 Healthc (Amst) 2014 Sep 1
Does Pain Lead to Tachycardia? Revisiting the Association Between Self-reported Pain and Heart Rate in a National Sample of Urgent Emergency Department Visits. Dayoub EJ, Jena AB Mayo Clinic proceedings 26250732 Mayo Clin Proc 2015 Aug
Access, quality, and costs of care at physician owned hospitals in the United States: observational study. Blumenthal DM, Orav EJ, Jena AB, Dudzinski DM, Le ST, Jha AK BMJ (Clinical research ed.) 26333819 BMJ 2015 Sep 2
Chronic Disease Prevalence and Healthy Lifestyle Behaviors Among US Health Care Professionals. Dayoub E, Jena AB Mayo Clinic proceedings 26422242 Mayo Clin Proc 2015 Dec
Physician age and outcomes in elderly patients in hospital in the US: observational study. Tsugawa Y, Newhouse JP, Zaslavsky AM, Blumenthal DM, Jena AB BMJ (Clinical research ed.) 28512089 BMJ 2017 May 16
Sex Differences in Physician Salary in US Public Medical Schools. Jena AB, Olenski AR, Blumenthal DM JAMA internal medicine 27400435 JAMA Intern Med 2016 Sep 1
Adverse inpatient outcomes during the transition to a new electronic health record system: observational study. Barnett ML, Mehrotra A, Jena AB BMJ (Clinical research ed.) 27471242 BMJ 2016 Jul 28
Differences in incomes of physicians in the United States by race and sex: observational study. Ly DP, Seabury SA, Jena AB BMJ (Clinical research ed.) 27268490 BMJ 2016 Jun 7
U.S. Immigration Policy and American Medical Research: The Scientific Contributions of Foreign Medical Graduates. Khullar D, Blumenthal DM, Olenski AR, Jena AB Annals of internal medicine 28973126 Ann Intern Med 2017 Oct 17
Golf habits among physicians and surgeons: observational cohort study. Koplewitz G, Blumenthal DM, Gross N, Hicks T, Jena AB BMJ (Clinical research ed.) 30530803 BMJ 2018 Dec 10
A Health Plan's Formulary Led To Reduced Use Of Extended-Release Opioids But Did Not Lower Overall Opioid Use. Barnett ML, Olenski AR, Thygeson NM, Ishisaka D, Wong S, Jena AB, Mehrotra A Health affairs (Project Hope) 30179550 Health Aff (Millwood) 2018 Sep
Birth Month and Influenza Vaccination in Children. Worsham C, Woo J, Jena AB The New England journal of medicine 32640138 N Engl J Med 2020 Jul 9
Decline and Rebound in Routine Cancer Screening Rates During the COVID-19 Pandemic. McBain RK, Cantor JH, Jena AB, Pera MF, Bravata DM, Whaley CM Journal of general internal medicine 33742300 J Gen Intern Med 2021 Jun
Association of residency work hour reform with long term quality and costs of care of US physicians: observational study. Jena AB, Farid M, Blumenthal D, Bhattacharya J BMJ (Clinical research ed.) 31292124 BMJ 2019 Jul 10
Tying Reimbursement to Outcomes Is an Ideal Strategy for PCSK9 Inhibitors. Blumenthal DM, Goldman D, Jena AB JAMA cardiology 28854318 JAMA Cardiol 2017 Oct 1
The need for speed: observational study of physician driving behaviors. Zimerman A, Worsham C, Woo J, Jena AB BMJ (Clinical research ed.) 31852682 BMJ 2019 Dec 18
Physician Network Connections Associated With Faster De-Adoption of Dronedarone for Permanent Atrial Fibrillation. Stecher C, Everhart A, Smith LB, Jena A, Ross JS, Desai NR, Shah N, Karaca-Mandic P Circulation. Cardiovascular quality and outcomes 34555928 Circ Cardiovasc Qual Outcomes 2021 Oct
Exposing physicians to reduced residency work hours did not adversely affect patient outcomes after residency. Jena AB, Schoemaker L, Bhattacharya J Health affairs (Project Hope) 25288430 Health Aff (Millwood) 2014 Oct
Medical malpractice reform: noneconomic damages caps reduced payments 15 percent, with varied effects by specialty. Seabury SA, Helland E, Jena AB Health affairs (Project Hope) 25339633 Health Aff (Millwood) 2014 Nov
Divorce among physicians and other healthcare professionals in the United States: analysis of census survey data. Ly DP, Seabury SA, Jena AB BMJ (Clinical research ed.) 25694110 BMJ 2015 Feb 18
Outcomes after out-of-hospital cardiac arrest treated by basic vs advanced life support. Sanghavi P, Jena AB, Newhouse JP, Zaslavsky AM JAMA internal medicine 25419698 JAMA Intern Med 2015 Feb
Association between treatment toxicity and outcomes in oncology clinical trials. Abola MV, Prasad V, Jena AB Annals of oncology : official journal of the European Society for Medical Oncology 25193993 Ann Oncol 2014 Nov
Hospital Prescribing of Opioids to Medicare Beneficiaries. Jena AB, Goldman D, Karaca-Mandic P JAMA internal medicine 27294595 JAMA Intern Med 2016 Jul 1
Outcomes of Basic Versus Advanced Life Support for Out-of-Hospital Medical Emergencies. Sanghavi P, Jena AB, Newhouse JP, Zaslavsky AM Annals of internal medicine 27380156 Ann Intern Med 2016 Jul 5
Sex Differences in Academic Rank in US Medical Schools in 2014. Jena AB, Khullar D, Ho O, Olenski AR, Blumenthal DM JAMA 26372584 JAMA 2015 Sep 15
Proportion of Non-US-Born and Noncitizen Health Care Professionals in the United States in 2016. Patel YM, Ly DP, Hicks T, Jena AB JAMA 30512091 JAMA 2018 Dec 4
Characteristics of Physicians Excluded From US Medicare and State Public Insurance Programs for Fraud, Health Crimes, or Unlawful Prescribing of Controlled Substances. Chen A, Blumenthal DM, Jena AB JAMA network open 30646294 JAMA Netw Open 2018 Dec 7
Association between physician US News & World Report medical school ranking and patient outcomes and costs of care: observational study. Tsugawa Y, Blumenthal DM, Jha AK, Orav EJ, Jena AB BMJ (Clinical research ed.) 30257919 BMJ 2018 Sep 26
Regression discontinuity designs in healthcare research. Venkataramani AS, Bor J, Jena AB BMJ (Clinical research ed.) 26977086 BMJ 2016 Mar 14
Outcomes of Basic Versus Advanced Life Support for Out-of-Hospital Medical Emergencies. Sanghavi P, Jena AB, Newhouse JP, Zaslavsky AM Annals of internal medicine 26457627 Ann Intern Med 2015 Nov 3
Do heads of government age more quickly? Observational study comparing mortality between elected leaders and runners-up in national elections of 17 countries. Olenski AR, Abola MV, Jena AB BMJ (Clinical research ed.) 26666894 BMJ 2015 Dec 14
Delays in Emergency Care and Mortality during Major U.S. Marathons. Jena AB, Mann NC, Wedlund LN, Olenski A The New England journal of medicine 28402772 N Engl J Med 2017 Apr 13
Sex Differences in Time Spent on Household Activities and Care of Children Among US Physicians, 2003-2016. Ly DP, Jena AB Mayo Clinic proceedings 29673711 Mayo Clin Proc 2018 Oct
Outcomes-Based Pricing as a Tool to Ensure Access to Novel but Expensive Biopharmaceuticals. Blumenthal DM, Goldman DP, Jena AB Annals of internal medicine 27951598 Ann Intern Med 2017 Feb 7
Distribution of Prescription Opioid Use Among Privately Insured Adults Without Cancer: United States, 2001 to 2013. Sun EC, Jena AB Annals of internal medicine 28892817 Ann Intern Med 2017 Nov 7
Early death after discharge from emergency departments: analysis of national US insurance claims data. Obermeyer Z, Cohn B, Wilson M, Jena AB, Cutler DM BMJ (Clinical research ed.) 28148486 BMJ 2017 Feb 1
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Bridging Levels of Understanding in Schizophrenia Through Computational Modeling. Anticevic A, Murray JD, Barch DM Clinical psychological science : a journal of the Association for Psychological Science 25960938 Clin Psychol Sci 2015 May
Relationship of resting brain hyperconnectivity and schizophrenia-like symptoms produced by the NMDA receptor antagonist ketamine in humans. Driesen NR, McCarthy G, Bhagwagar Z, Bloch M, Calhoun V, D'Souza DC, Gueorguieva R, He G, Ramachandran R, Suckow RF, Anticevic A, Morgan PT, Krystal JH Molecular psychiatry 23337947 Mol Psychiatry 2013 Nov
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N-methyl-D-aspartate receptor antagonist effects on prefrontal cortical connectivity better model early than chronic schizophrenia. Anticevic A, Corlett PR, Cole MW, Savic A, Gancsos M, Tang Y, Repovs G, Murray JD, Driesen NR, Morgan PT, Xu K, Wang F, Krystal JH Biological psychiatry 25281999 Biol Psychiatry 2015 Mar 15
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Reward and loss incentives improve spatial working memory by shaping trial-by-trial posterior frontoparietal signals. Cho YT, Moujaes F, Schleifer CH, Starc M, Ji JL, Santamauro N, Adkinson B, Kolobaric A, Flynn M, Krystal JH, Murray JD, Repovs G, Anticevic A NeuroImage 35346841 Neuroimage 2022 Jul 1
Understanding the role of thalamic circuits in schizophrenia neuropathology. Anticevic A Schizophrenia research 27939828 Schizophr Res 2017 Feb
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Electrophysiological Studies of Reception of Facial Communication in Autism Spectrum Disorder and Schizophrenia. Levy EJ, Foss-Feig J, Isenstein EL, Srihari V, Anticevic A, Naples AJ, McPartland JC Review journal of autism and developmental disorders 36568688 Rev J Autism Dev Disord 2022 Dec
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Global resting-state functional magnetic resonance imaging analysis identifies frontal cortex, striatal, and cerebellar dysconnectivity in obsessive-compulsive disorder. Anticevic A, Hu S, Zhang S, Savic A, Billingslea E, Wasylink S, Repovs G, Cole MW, Bednarski S, Krystal JH, Bloch MH, Li CS, Pittenger C Biological psychiatry 24314349 Biol Psychiatry 2014 Apr 15
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Mapping the human brain's cortical-subcortical functional network organization. Ji JL, Spronk M, Kulkarni K, Repovš G, Anticevic A, Cole MW NeuroImage 30291974 Neuroimage 2019 Jan 15
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Transcriptomics-informed large-scale cortical model captures topography of pharmacological neuroimaging effects of LSD. Burt JB, Preller KH, Demirtas M, Ji JL, Krystal JH, Vollenweider FX, Anticevic A, Murray JD eLife 34313217 Elife 2021 Jul 27
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Dissociable Disruptions in Thalamic and Hippocampal Resting-State Functional Connectivity in Youth with 22q11.2 Deletions. Schleifer C, Lin A, Kushan L, Ji JL, Yang G, Bearden CE, Anticevic A The Journal of neuroscience : the official journal of the Society for Neuroscience 30478034 J Neurosci 2019 Feb 13
Association of Thalamic Dysconnectivity and Conversion to Psychosis in Youth and Young Adults at Elevated Clinical Risk. Anticevic A, Haut K, Murray JD, Repovs G, Yang GJ, Diehl C, McEwen SC, Bearden CE, Addington J, Goodyear B, Cadenhead KS, Mirzakhanian H, Cornblatt BA, Olvet D, Mathalon DH, McGlashan TH, Perkins DO, Belger A, Seidman LJ, Tsuang MT, van Erp TG, Walker EF, Hamann S, Woods SW, Qiu M, Cannon TD JAMA psychiatry 26267151 JAMA Psychiatry 2015 Sep
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The impact of NMDA receptor blockade on human working memory-related prefrontal function and connectivity. Driesen NR, McCarthy G, Bhagwagar Z, Bloch MH, Calhoun VD, D'Souza DC, Gueorguieva R, He G, Leung HC, Ramani R, Anticevic A, Suckow RF, Morgan PT, Krystal JH Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology 23856634 Neuropsychopharmacology 2013 Dec
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