Publications Search by Program
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The search results on this publication page are automated on a monthly schedule based on acknowledgement of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.
NIH Director’s Transformative Research Awards (2125)
| Publication Title | Authors | Journal | Publication Date | Page No | PubMedID |
|---|---|---|---|---|---|
| Radiosynthesis and PET Bioimaging of 76Br-Bedaquiline in a Murine Model of Tuberculosis. | Ordonez, Alvaro A; Carroll, Laurence S; Abhishek, Sudhanshu; Mota, Filipa; Ruiz-Bedoya, Camilo A; Klunk, Mariah H; Singh, Alok K; Freundlich, Joel S; Mease, Ronnie C; Jain, Sanjay K | ACS infectious diseases. | 2019 Jul 29; | 31345032 | |
| Mosaic representations of odors in the input and output layers of the mouse olfactory bulb. | Chae, Honggoo; Kepple, Daniel R; Bast, Walter G; Murthy, Venkatesh N; Koulakov, Alexei A; Albeanu, Dinu F | Nature neuroscience. | 2019 Aug; | 31332371 | |
| Dual-polarization analog optical phase conjugation for focusing light through scattering media. | Cheng, Zhongtao; Yang, Jiamiao; Wang, Lihong V | Applied physics letters. | 2019 Jun 10; | 31312071 | |
| A cytosine deaminase for programmable single-base RNA editing. | Abudayyeh, Omar O; Gootenberg, Jonathan S; Franklin, Brian; Koob, Jeremy; Kellner, Max J; Ladha, Alim; Joung, Julia; Kirchgatterer, Paul; Cox, David B T; Zhang, Feng | Science (New York, N.Y.). | 2019 07 26; | 31296651 | |
| Multi-immersion open-top light-sheet microscope for high-throughput imaging of cleared tissues. | Glaser, Adam K; Reder, Nicholas P; Chen, Ye; Yin, Chengbo; Wei, Linpeng; Kang, Soyoung; Barner, Lindsey A; Xie, Weisi; McCarty, Erin F; Mao, Chenyi; Halpern, Aaron R; Stoltzfus, Caleb R; Daniels, Jonathan S; Gerner, Michael Y; Nicovich, Philip R; Vaughan, | Nature communications. | 2019 Jul 04; | 31273194 | |
| Genome wide analysis of 3' UTR sequence elements and proteins regulating mRNA stability during maternal-to-zygotic transition in zebrafish. | Vejnar, Charles E; Abdel Messih, Mario; Takacs, Carter M; Yartseva, Valeria; Oikonomou, Panos; Christiano, Romain; Stoeckius, Marlon; Lau, Stephanie; Lee, Miler T; Beaudoin, Jean-Denis; Musaev, Damir; Darwich-Codore, Hiba; Walther, Tobias C; Tavazoie, Sae | Genome research. | 2019 07; | 31227602 | |
| PennPET Explorer: Design and Preliminary Performance of a Whole-body Imager. | Karp, Joel S; Vishwanath, Varsha; Geagan, Michael; Muehllehner, Gerd; Pantel, Austin; Parma, Michael; Perkins, Amy; Schmall, Jeffrey; Werner, Matthew; Daube-Witherspoon, Margaret E | Journal of nuclear medicine : official publication, Society of Nuclear Medicine. | 2019 Jun 21; | 31227573 | |
| Dual lineage tracing shows that glomerular parietal epithelial cells can transdifferentiate toward the adult podocyte fate. | Kaverina, Natalya V; Eng, Diana G; Freedman, Benjamin S; Kutz, J Nathan; Chozinski, Tyler J; Vaughan, Joshua C; Miner, Jeffrey H; Pippin, Jeffrey W; Shankland, Stuart J | Kidney international. | 2019 Mar 29; | 31200942 | |
| Exact distance measurements for structure and dynamics in solid proteins by fast-magic-angle-spinning NMR. | Grohe, Kristof; Nimerovsky, Evgeny; Singh, Himanshu; Vasa, Suresh K; Söldner, Benedikt; Vögeli, Beat; Rienstra, Chad M; Linser, Rasmus | Chemical communications (Cambridge, England). | 2019 Jul 14; | 31199417 | |
| RNA-guided DNA insertion with CRISPR-associated transposases. | Strecker, Jonathan; Ladha, Alim; Gardner, Zachary; Schmid-Burgk, Jonathan L; Makarova, Kira S; Koonin, Eugene V; Zhang, Feng | Science (New York, N.Y.). | 2019 Jun 06; | 31171706 | |
| Constitutive splicing and economies of scale in gene expression. | Ding, Fangyuan; Elowitz, Michael B | Nature structural & molecular biology. | 2019 Jun; | 31133700 | |
| Structural Insights into the Lipid A Transport Pathway in MsbA. | Padayatti, Pius S; Lee, Sung Chang; Stanfield, Robyn L; Wen, Po-Chao; Tajkhorshid, Emad; Wilson, Ian A; Zhang, Qinghai | Structure (London, England : 1993). | 2019 Apr 25; | 31130486 | |
| Multiplexed detection of RNA using MERFISH and branched DNA amplification. | Xia, Chenglong; Babcock, Hazen P; Moffitt, Jeffrey R; Zhuang, Xiaowei | Scientific reports. | 2019 May 22; | 31118500 | |
| The processivity factor Pol32 mediates nuclear localization of DNA polymerase delta and prevents chromosomal fragile site formation in Drosophila development. | Ji, Jingyun; Tang, Xiaona; Hu, Wen; Maggert, Keith A; Rong, Yikang S | PLoS genetics. | 2019 May; | 31100062 | |
| Systematic evasion of the restriction-modification barrier in bacteria. | Johnston, Christopher D; Cotton, Sean L; Rittling, Susan R; Starr, Jacqueline R; Borisy, Gary G; Dewhirst, Floyd E; Lemon, Katherine P | Proceedings of the National Academy of Sciences of the United States of America. | 2019 Jun 04; | 31097593 | |
| Imaging-based pooled CRISPR screening reveals regulators of lncRNA localization. | Wang, Chong; Lu, Tian; Emanuel, George; Babcock, Hazen P; Zhuang, Xiaowei | Proceedings of the National Academy of Sciences of the United States of America. | 2019 May 28; | 31085639 | |
| A multiplexed DNA FISH strategy for assessing genome architecture in Caenorhabditis elegans. | Fields, Brandon D; Nguyen, Son C; Nir, Guy; Kennedy, Scott | eLife. | 2019 May 14; | 31084706 | |
| Molecular transport through primary human small intestinal monolayers by culture on a collagen scaffold with a gradient of chemical cross-linking. | Speer, Jennifer E; Gunasekara, Dulan B; Wang, Yuli; Fallon, John K; Attayek, Peter J; Smith, Philip C; Sims, Christopher E; Allbritton, Nancy L | Journal of biological engineering. | 2019; | 31061676 | |
| Structural basis for the promiscuous PAM recognition by Corynebacterium diphtheriae Cas9. | Hirano, Seiichi; Abudayyeh, Omar O; Gootenberg, Jonathan S; Horii, Takuro; Ishitani, Ryuichiro; Hatada, Izuho; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu | Nature communications. | 2019 04 29; | 31036811 | |
| Serotonin transporter-ibogaine complexes illuminate mechanisms of inhibition and transport. | Coleman, Jonathan A; Yang, Dongxue; Zhao, Zhiyu; Wen, Po-Chao; Yoshioka, Craig; Tajkhorshid, Emad; Gouaux, Eric | Nature. | 2019 05; | 31019304 | |
| Chemical composition of DNA-encoded libraries, past present and future. | Dickson, Paige; Kodadek, Thomas | Organic & biomolecular chemistry. | 2019 May 15; | 31017595 | |
| Microfluidics-Based Organism Isolation from Whole Blood: An Emerging Tool for Bloodstream Infection Diagnosis. | Burklund, Alison; Zhang, John X J | Annals of biomedical engineering. | 2019 Jul; | 30980291 | |
| Characterization of Lipid-Protein Interactions and Lipid-Mediated Modulation of Membrane Protein Function through Molecular Simulation. | Muller, Melanie P; Jiang, Tao; Sun, Chang; Lihan, Muyun; Pant, Shashank; Mahinthichaichan, Paween; Trifan, Anda; Tajkhorshid, Emad | Chemical reviews. | 2019 May 08; | 30978005 | |
| In vivo superresolution photoacoustic computed tomography by localization of single dyed droplets. | Zhang, Pengfei; Li, Lei; Lin, Li; Shi, Junhui; Wang, Lihong V | Light, science & applications. | 2019; | 30962922 | |
| High-throughput, label-free, single-cell photoacoustic microscopy of intratumoral metabolic heterogeneity. | Hai, Pengfei; Imai, Toru; Xu, Song; Zhang, Ruiying; Aft, Rebecca L; Zou, Jun; Wang, Lihong V | Nature biomedical engineering. | 2019 Apr 01; | 30936431 | |
| Microfluidics for silica biomaterials synthesis: opportunities and challenges. | Hao, Nanjing; Nie, Yuan; Zhang, John X J | Biomaterials science. | 2019 Mar 28; | 30919847 | |
| High-Resolution Structure of Cas13b and Biochemical Characterization of RNA Targeting and Cleavage. | Slaymaker, Ian M; Mesa, Pablo; Kellner, Max J; Kannan, Soumya; Brignole, Edward; Koob, Jeremy; Feliciano, Patricia R; Stella, Stefano; Abudayyeh, Omar O; Gootenberg, Jonathan S; Strecker, Jonathan; Montoya, Guillermo; Zhang, Feng | Cell reports. | 2019 Mar 26; | 30917325 | |
| A BODIPY-Based Donor/Donor-Acceptor System: Towards Highly Efficient Long-Wavelength-Excitable Near-IR Polymer Dots with Narrow and Strong Absorption Features. | Chen, Lei; Chen, Dandan; Jiang, Yifei; Zhang, Jicheng; Yu, Jiangbo; DuFort, Christopher C; Hingorani, Sunil R; Zhang, Xuanjun; Wu, Changfeng; Chiu, Daniel T | Angewandte Chemie (International ed. in English). | 2019 Mar 25; | 30912228 | |
| Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH. | Eng, Chee-Huat Linus; Lawson, Michael; Zhu, Qian; Dries, Ruben; Koulena, Noushin; Takei, Yodai; Yun, Jina; Cronin, Christopher; Karp, Christoph; Yuan, Guo-Cheng; Cai, Long | Nature. | 2019 Apr; | 30911168 | |
| Matrix Metalloproteinases in Pulmonary and Central Nervous System Tuberculosis-A Review. | Rohlwink, Ursula K; Walker, Naomi F; Ordonez, Alvaro A; Li, Yifan J; Tucker, Elizabeth W; Elkington, Paul T; Wilkinson, Robert J; Wilkinson, Katalin A | International journal of molecular sciences. | 2019 Mar 18; | 30889803 | |
| Ancestral characterization of 1018 cancer cell lines highlights disparities and reveals gene expression and mutational differences. | Kessler, Michael D; Bateman, Nicholas W; Conrads, Thomas P; Maxwell, George L; Dunning Hotopp, Julie C; O'Connor, Timothy D | Cancer. | 2019 Mar 13; | 30865299 | |
| Increasing the Precision of Hypertension Treatment Through Personalized Trials: a Pilot Study. | Kronish, Ian M; Cheung, Ying Kuen; Shimbo, Daichi; Julian, Jacob; Gallagher, Benjamin; Parsons, Faith; Davidson, Karina W | Journal of general internal medicine. | 2019 Mar 11; | 30859504 | |
| Thy-1 in Integrin Mediated Mechanotransduction. | Hu, Ping; Barker, Thomas H | Frontiers in cell and developmental biology. | 2019; | 30859101 | |
| A conserved morphogenetic mechanism for epidermal ensheathment of nociceptive sensory neurites. | Jiang, Nan; Rasmussen, Jeffrey P; Clanton, Joshua A; Rosenberg, Marci F; Luedke, Kory P; Cronan, Mark R; Parker, Edward D; Kim, Hyeon-Jin; Vaughan, Joshua C; Sagasti, Alvaro; Parrish, Jay Z | eLife. | 2019 Mar 11; | 30855229 | |
| In Vitro Generation of Mouse Colon Crypts. | Wang, Yuli; Gunasekara, Dulan B; Attayek, Peter J; Reed, Mark I; DiSalvo, Matthew; Nguyen, Daniel L; Dutton, Johanna S; Lebhar, Michael S; Bultman, Scott J; Sims, Christopher E; Magness, Scott T; Allbritton, Nancy L | ACS biomaterials science & engineering. | 2017 Oct 09; | 30854421 | |
| Microfluidics-mediated self-template synthesis of anisotropic hollow ellipsoidal mesoporous silica nanomaterials. | Hao, Nanjing; Nie, Yuan; Tadimety, Amogha; Closson, Andrew B; Zhang, John X J | Materials research letters. | 2017; | 30854261 | |
| Directed Evolution of Split APEX2 Peroxidase. | Han, Yisu; Branon, Tess Caroline; Martell, Jeffrey D; Boassa, Daniela; Shechner, David; Ellisman, Mark H; Ting, Alice | ACS chemical biology. | 2019 Apr 19; | 30848125 | |
| Single-shot real-time femtosecond imaging of temporal focusing. | Liang, Jinyang; Zhu, Liren; Wang, Lihong V | Light, science & applications. | 2018; | 30839588 | |
| Genetic Modification Strategies to Enhance CAR T Cell Persistence for Patients With Solid Tumors. | DeRenzo, Christopher; Gottschalk, Stephen | Frontiers in immunology. | 2019; | 30828333 | |
| Small-Molecule Patterning via Prefunctionalized Alkanethiols. | Cao, Huan H; Nakatsuka, Nako; Deshayes, Stephanie; Abendroth, John M; Yang, Hongyan; Weiss, Paul S; Kasko, Andrea M; Andrews, Anne M | Chemistry of materials : a publication of the American Chemical Society. | 2018 Jun 26; | 30828130 | |
| A look at the increasing demographic representation within behavioral medicine. | Yoon, Sunmoo; Falzon, Louise; Anderson, Norman B; Davidson, Karina W | Journal of behavioral medicine. | 2019 Feb; | 30825089 | |
| Single-shot ultrafast optical imaging. | Liang, Jinyang; Wang, Lihong V | Optica. | 2018 Sep 20; | 30820445 | |
| Dichroism-sensitive photoacoustic computed tomography. | Qu, Yuan; Li, Lei; Shen, Yuecheng; Wei, Xiaoming; Wong, Terence T W; Hu, Peng; Yao, Junjie; Maslov, Konstantin; Wang, Lihong V | Optica. | 2018 Apr 20; | 30820444 | |
| MaGIC: a machine learning tool set and web application for monoallelic gene inference from chromatin. | Vinogradova, Svetlana; Saksena, Sachit D; Ward, Henry N; Vigneau, Sébastien; Gimelbrant, Alexander A | BMC bioinformatics. | 2019 Feb 28; | 30819107 | |
| Engineering for Success: Approaches to Improve Chimeric Antigen Receptor T Cell Therapy for Solid Tumors. | Mata, Melinda; Gottschalk, Stephen | Drugs. | 2019 Mar; | 30796733 | |
| Hachimoji DNA and RNA: A genetic system with eight building blocks. | Hoshika, Shuichi; Leal, Nicole A; Kim, Myong-Jung; Kim, Myong-Sang; Karalkar, Nilesh B; Kim, Hyo-Joong; Bates, Alison M; Watkins Jr, Norman E; SantaLucia, Holly A; Meyer, Adam J; DasGupta, Saurja; Piccirilli, Joseph A; Ellington, Andrew D; SantaLucia Jr, | Science (New York, N.Y.). | 2019 02 22; | 30792304 | |
| Photoacoustic computed tomography of human extremities. | Wray, Parker; Lin, Li; Hu, Peng; Wang, Lihong V | Journal of biomedical optics. | 2019 Feb; | 30784244 | |
| Ultrafast microfluidic synthesis of hierarchical triangular silver core-silica shell nanoplatelet toward enhanced cellular internalization. | Hao, Nanjing; Nie, Yuan; Xu, Zhe; Zhang, John X J | Journal of colloid and interface science. | 2019 Apr 15; | 30771632 | |
| Stem Cell Quiescence: Dynamism, Restraint, and Cellular Idling. | van Velthoven, Cindy T J; Rando, Thomas A | Cell stem cell. | 2019 Feb 07; | 30735649 | |
| Spin-Dependent Ionization of Chiral Molecular Films. | Abendroth, John M; Cheung, Kevin M; Stemer, Dominik M; El Hadri, Mohammed S; Zhao, Chuanzhen; Fullerton, Eric E; Weiss, Paul S | Journal of the American Chemical Society. | 2019 Mar 06; | 30734553 | |
| First Human Imaging Studies with the EXPLORER Total-Body PET Scanner. | Badawi, Ramsey D; Shi, Hongcheng; Hu, Pengcheng; Chen, Shuguang; Xu, Tianyi; Price, Patricia M; Ding, Yu; Spencer, Benjamin A; Nardo, Lorenzo; Liu, Weiping; Bao, Jun; Jones, Terry; Li, Hongdi; Cherry, Simon R | Journal of nuclear medicine : official publication, Society of Nuclear Medicine. | 2019 Mar; | 30733314 | |
| Determining the pharmacokinetics of nicotinic drugs in the endoplasmic reticulum using biosensors. | Shivange, Amol V; Borden, Philip M; Muthusamy, Anand K; Nichols, Aaron L; Bera, Kallol; Bao, Huan; Bishara, Ishak; Jeon, Janice; Mulcahy, Matthew J; Cohen, Bruce; O'Riordan, Saidhbhe L; Kim, Charlene; Dougherty, Dennis A; Chapman, Edwin R; Marvin, Jonatha | The Journal of general physiology. | 2019 Jun 03; | 30718376 | |
| REST and Neural Gene Network Dysregulation in iPSC Models of Alzheimer's Disease. | Meyer, Katharina; Feldman, Heather M; Lu, Tao; Drake, Derek; Lim, Elaine T; Ling, King-Hwa; Bishop, Nicholas A; Pan, Ying; Seo, Jinsoo; Lin, Yuan-Ta; Su, Susan C; Church, George M; Tsai, Li-Huei; Yankner, Bruce A | Cell reports. | 2019 Jan 29; | 30699343 | |
| Engineering of CRISPR-Cas12b for human genome editing. | Strecker, Jonathan; Jones, Sara; Koopal, Balwina; Schmid-Burgk, Jonathan; Zetsche, Bernd; Gao, Linyi; Makarova, Kira S; Koonin, Eugene V; Zhang, Feng | Nature communications. | 2019 01 22; | 30670702 | |
| Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution. | Gao, Ruixuan; Asano, Shoh M; Upadhyayula, Srigokul; Pisarev, Igor; Milkie, Daniel E; Liu, Tsung-Li; Singh, Ved; Graves, Austin; Huynh, Grace H; Zhao, Yongxin; Bogovic, John; Colonell, Jennifer; Ott, Carolyn M; Zugates, Christopher; Tappan, Susan; Rodrigue | Science (New York, N.Y.). | 2019 01 18; | 30655415 | |
| Mini EXPLORER II: a prototype high-sensitivity PET/CT scanner for companion animal whole body and human brain scanning. | Lv, Yang; Lv, Xinyu; Liu, Weiping; Judenhofer, Martin S; Zwingenberger, Allison; Wisner, Erik; Berg, Eric; McKenney, Sarah; Leung, Edwin; Spencer, Benjamin A; Cherry, Simon R; Badawi, Ramsey D | Physics in medicine and biology. | 2019 Mar 21; | 30620929 | |
| Enabling genetic analysis of diverse bacteria with Mobile-CRISPRi. | Peters, Jason M; Koo, Byoung-Mo; Patino, Ramiro; Heussler, Gary E; Hearne, Cameron C; Qu, Jiuxin; Inclan, Yuki F; Hawkins, John S; Lu, Candy H S; Silvis, Melanie R; Harden, M Michael; Osadnik, Hendrik; Peters, Joseph E; Engel, Joanne N; Dutton, Rachel J; Grossman, Alan D; Gross, Carol A; Rosenberg, Oren S | Nature microbiology. | 2019 Feb; | 30617347 | |
| Primary Cell-Derived Intestinal Models: Recapitulating Physiology. | Dutton, Johanna S; Hinman, Samuel S; Kim, Raehyun; Wang, Yuli; Allbritton, Nancy L | Trends in biotechnology. | 2018 Dec 24; | 30591184 | |
| Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling. | Nir, Guy; Farabella, Irene; Pérez Estrada, Cynthia; Ebeling, Carl G; Beliveau, Brian J; Sasaki, Hiroshi M; Lee, S Dean; Nguyen, Son C; McCole, Ruth B; Chattoraj, Shyamtanu; Erceg, Jelena; AlHaj Abed, Jumana; Martins, Nuno M C; Nguyen, Huy Q; Hannan, Mohammed A; Russell, Sheikh; Durand, Neva C; Rao, Suhas S P; Kishi, Jocelyn Y; Soler-Vila, Paula; Di Pierro, Michele; Onuchic, José N; Callahan, Steven P; Schreiner, John M; Stuckey, Jeff A; Yin, Peng; Aiden, Erez Lieberman; Marti-Renom, Marc A; Wu, C-Ting | PLoS genetics. | 2018 12; | 30586358 | |
| Latent Sex Differences in Molecular Signaling That Underlies Excitatory Synaptic Potentiation in the Hippocampus. | Jain, Anant; Huang, Guang Zhe; Woolley, Catherine S | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2019 Feb 27; | 30578341 | |
| Microfluidic synthesis and on-chip enrichment application of two-dimensional hollow sandwich-like mesoporous silica nanosheet with water ripple-like surface. | Hao, Nanjing; Nie, Yuan; Closson, Andrew B; Zhang, John X J | Journal of colloid and interface science. | 2018 Dec 11; | 30576991 | |
| Butyrate consumption of differentiated colonocytes in the upper crypt promotes homeostatic proliferation of stem and progenitor cells near the crypt base. | Bultman, Scott J | Translational cancer research. | 2016 Sep; | 30568890 | |
| Predicting age from the transcriptome of human dermal fibroblasts. | Fleischer, Jason G; Schulte, Roberta; Tsai, Hsiao H; Tyagi, Swati; Ibarra, Arkaitz; Shokhirev, Maxim N; Huang, Ling; Hetzer, Martin W; Navlakha, Saket | Genome biology. | 2018 12 20; | 30567591 | |
| Microbiome as a tool and a target in the effort to address antimicrobial resistance. | Relman, David A; Lipsitch, Marc | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Dec 18; | 30559176 | |
| Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data. | Davis, Nicole M; Proctor, Diana M; Holmes, Susan P; Relman, David A; Callahan, Benjamin J | Microbiome. | 2018 Dec 17; | 30558668 | |
| Visualization of long-lived proteins reveals age mosaicism within nuclei of postmitotic cells. | Toyama, Brandon H; Arrojo E Drigo, Rafael; Lev-Ram, Varda; Ramachandra, Ranjan; Deerinck, Thomas J; Lechene, Claude; Ellisman, Mark H; Hetzer, Martin W | The Journal of cell biology. | 2019 Feb 04; | 30552100 | |
| Transvaginal fast-scanning optical-resolution photoacoustic endoscopy. | Qu, Yuan; Li, Chiye; Shi, Junhui; Chen, Ruimin; Xu, Song; Rafsanjani, Hasan; Maslov, Konstantin; Krigman, Hannah; Garvey, Laura; Hu, Peng; Zhao, Peinan; Meyers, Karen; Diveley, Emily; Pizzella, Stephanie; Muench, Lisa; Punyamurthy, Nina; Goldstein, Naomi; | Journal of biomedical optics. | 2018 Dec; | 30520276 | |
| In vivo characterization of connective tissue remodeling using infrared photoacoustic spectra. | Qu, Yuan; Hu, Peng; Shi, Junhui; Maslov, Konstantin; Zhao, Peinan; Li, Chiye; Ma, Jun; Garcia-Uribe, Alejandro; Meyers, Karen; Diveley, Emily; Pizzella, Stephanie; Muench, Lisa; Punyamurthy, Nina; Goldstein, Naomi; Onwumere, Oji; Alisio, Mariana; Meyenbur | Journal of biomedical optics. | 2018 Dec; | 30520275 | |
| Noninvasive 11C-rifampin positron emission tomography reveals drug biodistribution in tuberculous meningitis. | Tucker, Elizabeth W; Guglieri-Lopez, Beatriz; Ordonez, Alvaro A; Ritchie, Brittaney; Klunk, Mariah H; Sharma, Richa; Chang, Yong S; Sanchez-Bautista, Julian; Frey, Sarah; Lodge, Martin A; Rowe, Steven P; Holt, Daniel P; Gobburu, Jogarao V S; Peloquin, Charles A; Mathews, William B; Dannals, Robert F; Pardo, Carlos A; Kannan, Sujatha; Ivaturi, Vijay D; Jain, Sanjay K | Science translational medicine. | 2018 Dec 05; | 30518610 | |
| The peculiar genetics of the ribosomal DNA blurs the boundaries of transgenerational epigenetic inheritance. | Bughio, Farah; Maggert, Keith A | Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology. | 2018 Dec 04; | 30511202 | |
| Herpes simplex virus 1 ICP6 impedes TNF receptor 1-induced necrosome assembly during compartmentalization to detergent-resistant membrane vesicles. | Ali, Mohammad; Roback, Linda; Mocarski, Edward S | The Journal of biological chemistry. | 2019 Jan 18; | 30504227 | |
| Calcium-Induced Lipid Nanocluster Structures: Sculpturing of the Plasma Membrane. | Hallock, Michael J; Greenwood, Alexander I; Wang, Yan; Morrissey, James H; Tajkhorshid, Emad; Rienstra, Chad M; Pogorelov, Taras V | Biochemistry. | 2018 Dec 18; | 30456950 | |
| Interactive Visualization of Hierarchically Structured Data. | Sankaran, Kris; Holmes, Susan | Journal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America. | 2018; | 30416327 | |
| Distinctive Structural and Molecular Features of Myelinated Inhibitory Axons in Human Neocortex. | Micheva, Kristina D; Chang, Edward F; Nana, Alissa L; Seeley, William W; Ting, Jonathan T; Cobbs, Charles; Lein, Ed; Smith, Stephen J; Weinberg, Richard J; Madison, Daniel V | eNeuro. | 2018 Sep-Oct; | 30406183 | |
| Radiotherapy induces responses of lung cancer to CTLA-4 blockade. | Formenti, Silvia C; Rudqvist, Nils-Petter; Golden, Encouse; Cooper, Benjamin; Wennerberg, Erik; Lhuillier, Claire; Vanpouille-Box, Claire; Friedman, Kent; Ferrari de Andrade, Lucas; Wucherpfennig, Kai W; Heguy, Adriana; Imai, Naoko; Gnjatic, Sacha; Emerson, Ryan O; Zhou, Xi Kathy; Zhang, Tuo; Chachoua, Abraham; Demaria, Sandra | Nature medicine. | 2018 Dec; | 30397353 | |
| Selected psychological comorbidities in coronary heart disease: Challenges and grand opportunities. | Davidson, Karina W; Alcántara, Carmela; Miller, Gregory E | The American psychologist. | 2018 Nov; | 30394780 | |
| Peridinin Is an Exceptionally Potent and Membrane-Embedded Inhibitor of Bilayer Lipid Peroxidation. | Haley, Hannah M S; Hill, Adam G; Greenwood, Alexander I; Woerly, Eric M; Rienstra, Chad M; Burke, Martin D | Journal of the American Chemical Society. | 2018 Nov 14; | 30388000 | |
| Molecular, spatial, and functional single-cell profiling of the hypothalamic preoptic region. | Moffitt, Jeffrey R; Bambah-Mukku, Dhananjay; Eichhorn, Stephen W; Vaughn, Eric; Shekhar, Karthik; Perez, Julio D; Rubinstein, Nimrod D; Hao, Junjie; Regev, Aviv; Dulac, Catherine; Zhuang, Xiaowei | Science (New York, N.Y.). | 2018 11 16; | 30385464 | |
| A community-developed open-source computational ecosystem for big neuro data. | Vogelstein, Joshua T; Perlman, Eric; Falk, Benjamin; Baden, Alex; Gray Roncal, William; Chandrashekhar, Vikram; Collman, Forrest; Seshamani, Sharmishtaa; Patsolic, Jesse L; Lillaney, Kunal; Kazhdan, Michael; Hider Jr, Robert; Pryor, Derek; Matelsky, Jorda | Nature methods. | 2018 11; | 30377345 | |
| Microfluidics-enabled rapid manufacturing of hierarchical silica-magnetic microflower toward enhanced circulating tumor cell screening. | Hao, Nanjing; Nie, Yuan; Tadimety, Amogha; Shen, Ting; Zhang, John X J | Biomaterials science. | 2018 Nov 20; | 30375583 | |
| Subcellular organization of UBE3A in human cerebral cortex. | Burette, Alain C; Judson, Matthew C; Li, Alissa N; Chang, Edward F; Seeley, William W; Philpot, Benjamin D; Weinberg, Richard J | Molecular autism. | 2018; | 30364390 | |
| Coaching from the sidelines: the nuclear periphery in genome regulation. | Buchwalter, Abigail; Kaneshiro, Jeanae M; Hetzer, Martin W | Nature reviews. Genetics. | 2019 Jan; | 30356165 | |
| Microtubule Acetylation Is Required for Mechanosensation in Drosophila. | Yan, Connie; Wang, Fei; Peng, Yun; Williams, Claire R; Jenkins, Brian; Wildonger, Jill; Kim, Hyeon-Jin; Perr, Jonathan B; Vaughan, Joshua C; Kern, Megan E; Falvo, Michael R; O'Brien 3rd, E Timothy; Superfine, Richard; Tuthill, John C; Xiang, Yang; Rogers, Stephen L; Parrish, Jay Z | Cell reports. | 2018 Oct 23; | 30355484 | |
| A Monolayer of Primary Colonic Epithelium Generated on a Scaffold with a Gradient of Stiffness for Drug Transport Studies. | Gunasekara, Dulan B; Speer, Jennifer; Wang, Yuli; Nguyen, Daniel L; Reed, Mark I; Smiddy, Nicole M; Parker, Joel S; Fallon, John K; Smith, Philip C; Sims, Christopher E; Magness, Scott T; Allbritton, Nancy L | Analytical chemistry. | 2018 Nov 20; | 30350627 | |
| ?v?3 Integrin drives fibroblast contraction and strain stiffening of soft provisional matrix during progressive fibrosis. | Fiore, Vincent F; Wong, Simon S; Tran, Coleen; Tan, Chunting; Xu, Wenwei; Sulchek, Todd; White, Eric S; Hagood, James S; Barker, Thomas H | JCI insight. | 2018 Oct 18; | 30333317 | |
| Biomechanics show stem cell necessity for effective treatment of volumetric muscle loss using bioengineered constructs. | Quarta, Marco; Cromie Lear, Melinda J; Blonigan, Justin; Paine, Patrick; Chacon, Robert; Rando, Thomas A | NPJ Regenerative medicine. | 2018; | 30323949 | |
| Dual-view photoacoustic microscopy for quantitative cell nuclear imaging. | Cai, De; Wong, Terence T W; Zhu, Liren; Shi, Junhui; Chen, Sung-Liang; Wang, Lihong V | Optics letters. | 2018 Oct 15; | 30320772 | |
| Direct protein-lipid interactions shape the conformational landscape of secondary transporters. | Martens, Chloe; Shekhar, Mrinal; Borysik, Antoni J; Lau, Andy M; Reading, Eamonn; Tajkhorshid, Emad; Booth, Paula J; Politis, Argyris | Nature communications. | 2018 Oct 08; | 30297844 | |
| Effects of 3D culturing conditions on the transcriptomic profile of stem-cell-derived neurons. | Tekin, Halil; Simmons, Sean; Cummings, Beryl; Gao, Linyi; Adiconis, Xian; Hession, Cynthia C; Ghoshal, Ayan; Dionne, Danielle; Choudhury, Sourav R; Yesilyurt, Volkan; Sanjana, Neville E; Shi, Xi; Lu, Congyi; Heidenreich, Matthias; Pan, Jen Q; Levin, Joshu | Nature biomedical engineering. | 2018 Jul; | 30271673 | |
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| Positron Emission Tomography Imaging with 2-[18F]F- p-Aminobenzoic Acid Detects Staphylococcus aureus Infections and Monitors Drug Response. | Zhang, Zhuo; Ordonez, Alvaro A; Wang, Hui; Li, Yong; Gogarty, Kayla R; Weinstein, Edward A; Daryaee, Fereidoon; Merino, Jonathan; Yoon, Grace E; Kalinda, Alvin S; Mease, Ronnie C; Iuliano, James N; Smith-Jones, Peter M; Jain, Sanjay K; Tonge, Peter J | ACS infectious diseases. | 2018 Aug 17; | 30067329 | |
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| Caspase-8 Collaborates with Caspase-11 to Drive Tissue Damage and Execution of Endotoxic Shock. | Mandal, Pratyusha; Feng, Yanjun; Lyons, John D; Berger, Scott B; Otani, Shunsuke; DeLaney, Alexandra; Tharp, Gregory K; Maner-Smith, Kristal; Burd, Eileen M; Schaeffer, Michelle; Hoffman, Sandra; Capriotti, Carol; Roback, Linda; Young, Cedrick B; Liang, Z | Immunity. | 2018 Jul 17; | 30021146 | |
| Total intravenous versus inhaled anesthesia in transsphenoidal tumor surgery. | Gollapudy, Suneeta; Poetker, David M; Sidhu, Jasmeet; Riess, Matthias L | American journal of otolaryngology. | 2018 Sep - Oct; | 30017373 | |
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| Dark Classics in Chemical Neuroscience: 3,4-Methylenedioxymethamphetamine. | Dunlap, Lee E; Andrews, Anne M; Olson, David E | ACS chemical neuroscience. | 2018 Jul 12; | 30001118 | |
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| Formation of arrays of planar, murine, intestinal crypts possessing a stem/proliferative cell compartment and differentiated cell zone. | Kim, Raehyun; Wang, Yuli; Hwang, Shee-Hwan J; Attayek, Peter J; Smiddy, Nicole M; Reed, Mark I; Sims, Christopher E; Allbritton, Nancy L | Lab on a chip. | 2018 07 24; | 29944153 | |
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| Matrix Metalloproteinase Inhibition in a Murine Model of Cavitary Tuberculosis Paradoxically Worsens Pathology. | Ordonez, Alvaro A; Pokkali, Supriya; Sanchez-Bautista, Julian; Klunk, Mariah H; Urbanowski, Michael E; Kübler, André; Bishai, William R; Elkington, Paul T; Jain, Sanjay K | The Journal of infectious diseases. | 2018 Jun 16; | 29920600 | |
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| APOE4 Causes Widespread Molecular and Cellular Alterations Associated with Alzheimer's Disease Phenotypes in Human iPSC-Derived Brain Cell Types. | Lin, Yuan-Ta; Seo, Jinsoo; Gao, Fan; Feldman, Heather M; Wen, Hsin-Lan; Penney, Jay; Cam, Hugh P; Gjoneska, Elizabeta; Raja, Waseem K; Cheng, Jemmie; Rueda, Richard; Kritskiy, Oleg; Abdurrob, Fatema; Peng, Zhuyu; Milo, Blerta; Yu, Chung Jong; Elmsaouri, S | Neuron. | 2018 Jun 27; | 29861287 | |
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| [11C]Para-Aminobenzoic Acid: A Positron Emission Tomography Tracer Targeting Bacteria-Specific Metabolism. | Mutch, Christopher A; Ordonez, Alvaro A; Qin, Hecong; Parker, Matthew; Bambarger, Lauren E; Villanueva-Meyer, Javier E; Blecha, Joseph; Carroll, Valerie; Taglang, Celine; Flavell, Robert; Sriram, Renuka; VanBrocklin, Henry; Rosenberg, Oren; Ohliger, Micha | ACS infectious diseases. | 2018 Jul 13; | 29712422 | |
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| Structure of the alternative complex III in a supercomplex with cytochrome oxidase. | Sun, Chang; Benlekbir, Samir; Venkatakrishnan, Padmaja; Wang, Yuhang; Hong, Sangjin; Hosler, Jonathan; Tajkhorshid, Emad; Rubinstein, John L; Gennis, Robert B | Nature. | 2018 May; | 29695868 | |
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| Superresolution imaging of Drosophila tissues using expansion microscopy. | Jiang, Nan; Kim, Hyeon-Jin; Chozinski, Tyler J; Azpurua, Jorge E; Eaton, Benjamin A; Vaughan, Joshua C; Parrish, Jay Z | Molecular biology of the cell. | 2018 Jun 15; | 29688792 | |
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| Bioengineered Systems and Designer Matrices That Recapitulate the Intestinal Stem Cell Niche. | Wang, Yuli; Kim, Raehyun; Hinman, Samuel S; Zwarycz, Bailey; Magness, Scott T; Allbritton, Nancy L | Cellular and molecular gastroenterology and hepatology. | 2018 Mar; | 29675459 | |
| Polyserotonin Nanoparticles as Multifunctional Materials for Biomedical Applications. | Nakatsuka, Nako; Hasani-Sadrabadi, Mohammad Mahdi; Cheung, Kevin M; Young, Thomas D; Bahlakeh, Ghasem; Moshaverinia, Alireza; Weiss, Paul S; Andrews, Anne M | ACS nano. | ; | 29664607 | |
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| Antibody-mediated inhibition of MICA and MICB shedding promotes NK cell-driven tumor immunity. | Ferrari de Andrade, Lucas; Tay, Rong En; Pan, Deng; Luoma, Adrienne M; Ito, Yoshinaga; Badrinath, Soumya; Tsoucas, Daphne; Franz, Bettina; May Jr., Kenneth F; Harvey, Christopher J; Kobold, Sebastian; Pyrdol, Jason W; Yoon, Charles; Yuan, Guo-Cheng; Hodi, | Science (New York, N.Y.). | 2018 03 30; | 29599246 | |
| Establishment of human pluripotent stem cell-derived pancreatic ?-like cells in the mouse pancreas. | Ma, Haiting; Wert, Katherine J; Shvartsman, Dmitry; Melton, Douglas A; Jaenisch, Rudolf | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Apr 10; | 29599125 | |
| Personalized (N-of-1) Trials for Depression: A Systematic Review. | Kronish, Ian M; Hampsey, Meghan; Falzon, Louise; Konrad, Beatrice; Davidson, Karina W | Journal of clinical psychopharmacology. | 2018 Mar 28; | 29596148 | |
| Are Nomothetic or Ideographic Approaches Superior in Predicting Daily Exercise Behaviors? | Cheung, Ying Kuen; Hsueh, Pei-Yun Sabrina; Qian, Min; Yoon, Sunmoo; Meli, Laura; Diaz, Keith M; Schwartz, Joseph E; Kronish, Ian M; Davidson, Karina W | Methods of information in medicine. | 2017; | 29582914 | |
| Early life experience drives structural variation of neural genomes in mice. | Bedrosian, Tracy A; Quayle, Carolina; Novaresi, Nicole; Gage, Fred H | Science (New York, N.Y.). | 2018 03 23; | 29567711 | |
| A highly adaptive microbiome-based association test for survival traits. | Koh, Hyunwook; Livanos, Alexandra E; Blaser, Martin J; Li, Huilin | BMC genomics. | 2018 03 20; | 29558893 | |
| An evolutionary hotspot defines functional differences between CRYPTOCHROMES. | Rosensweig, Clark; Reynolds, Kimberly A; Gao, Peng; Laothamatas, Isara; Shan, Yongli; Ranganathan, Rama; Takahashi, Joseph S; Green, Carla B | Nature communications. | 2018 Mar 19; | 29556064 | |
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| Predator-secreted sulfolipids induce defensive responses in C. elegans. | Liu, Zheng; Kariya, Maro J; Chute, Christopher D; Pribadi, Amy K; Leinwand, Sarah G; Tong, Ada; Curran, Kevin P; Bose, Neelanjan; Schroeder, Frank C; Srinivasan, Jagan; Chalasani, Sreekanth H | Nature communications. | 2018 Mar 19; | 29555902 | |
| High-throughput ultraviolet photoacoustic microscopy with multifocal excitation. | Imai, Toru; Shi, Junhui; Wong, Terence T W; Li, Lei; Zhu, Liren; Wang, Lihong V | Journal of biomedical optics. | 2018 Mar; | 29546734 | |
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| Biomaterial Scaffolds as Pre-metastatic Niche Mimics Systemically Alter the Primary Tumor and Tumor Microenvironment. | Aguado, Brian A; Hartfield, Rachel M; Bushnell, Grace G; Decker, Joseph T; Azarin, Samira M; Nanavati, Dhaval; Schipma, Matthew J; Rao, Shreyas S; Oakes, Robert S; Zhang, Yining; Jeruss, Jacqueline S; Shea, Lonnie D | Advanced healthcare materials. | 2018 May; | 29521008 | |
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| Mapping a functional cancer genome atlas of tumor suppressors in mouse liver using AAV-CRISPR-mediated direct in vivo screening. | Wang, Guangchuan; Chow, Ryan D; Ye, Lupeng; Guzman, Christopher D; Dai, Xiaoyun; Dong, Matthew B; Zhang, Feng; Sharp, Phillip A; Platt, Randall J; Chen, Sidi | Science advances. | 2018 02; | 29503867 | |
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| Constitutive Signaling from an Engineered IL7 Receptor Promotes Durable Tumor Elimination by Tumor-Redirected T Cells. | Shum, Thomas; Omer, Bilal; Tashiro, Haruko; Kruse, Robert L; Wagner, Dimitrios L; Parikh, Kathan; Yi, Zhongzhen; Sauer, Tim; Liu, Daofeng; Parihar, Robin; Castillo, Paul; Liu, Hao; Brenner, Malcolm K; Metelitsa, Leonid S; Gottschalk, Stephen; Rooney, Cliona M | Cancer discovery. | 2017 11; | 28830878 | |
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| Inducible Activation of MyD88 and CD40 in CAR T Cells Results in Controllable and Potent Antitumor Activity in Preclinical Solid Tumor Models. | Mata, Melinda; Gerken, Claudia; Nguyen, Phuong; Krenciute, Giedre; Spencer, David M; Gottschalk, Stephen | Cancer discovery. | 2017 11; | 28801306 | |
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| Early Effects of Prolonged Cardiac Arrest and Ischemic Postconditioning during Cardiopulmonary Resuscitation on Cardiac and Brain Mitochondrial Function in Pigs. | Matsuura, Timothy R; Bartos, Jason A; Tsangaris, Adamantios; Shekar, Kadambari Chandra; Olson, Matthew D; Riess, Matthias L; Bienengraeber, Martin; Aufderheide, Tom P; Neumar, Robert W; Rees, Jennifer N; McKnite, Scott H; Dikalova, Anna E; Dikalov, Sergey I; Douglas, Hunter F; Yannopoulos, Demetris | Resuscitation. | 2017 Jul; | 28408349 | |
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| cis-Regulatory Circuits Regulating NEK6 Kinase Overexpression in Transformed B Cells Are Super-Enhancer Independent. | Huang, Yue; Koues, Olivia I; Zhao, Jiang-Yang; Liu, Regina; Pyfrom, Sarah C; Payton, Jacqueline E; Oltz, Eugene M | Cell reports. | 2017 Mar 21; | 28329684 | |
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| Re: Increased 18F-2-Fluorodeoxysorbitol (18F-FDS) Activity in a Pituitary Spindle Cell Carcinoma. | Javadi, Mehrbod S; Ordonez, Alvaro A; Jain, Sanjay K | Clinical nuclear medicine. | 2017 Mar 17; | 28319504 | |
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| Description of two novel members of the family Erysipelotrichaceae: Ileibacterium valens gen. nov., sp. nov. and Dubosiella newyorkensis, gen. nov., sp. nov., from the murine intestine, and emendation to the description of Faecalibaculum rodentium. | Cox, Laura M; Sohn, Jiho; Tyrrell, Kerin L; Citron, Diane M; Lawson, Paul A; Patel, Nisha B; Iizumi, Tadasu; Perez-Perez, Guillermo I; Goldstein, Ellie J C; Blaser, Martin J | International journal of systematic and evolutionary microbiology. | 2017 05; | 28100298 | |
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| Dermal ?? T Cells Do Not Freely Re-Circulate Out of Skin and Produce IL-17 to Promote Neutrophil Infiltration during Primary Contact Hypersensitivity. | Jiang, Xiaodong; Park, Chang Ook; Geddes Sweeney, Jenna; Yoo, Min Jae; Gaide, Olivier; Kupper, Thomas Seth | PloS one. | 2017; | 28081153 | |
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| Molecular Checkpoint Decisions Made by Subverted Vascular Niche Transform Indolent Tumor Cells into Chemoresistant Cancer Stem Cells. | Cao, Zhongwei; Scandura, Joseph M; Inghirami, Giorgio G; Shido, Koji; Ding, Bi-Sen; Rafii, Shahin | Cancer cell. | 2017 Jan 09; | 27989801 | |
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| Small molecule modulator of sigma 2 receptor is neuroprotective and reduces cognitive deficits and neuroinflammation in experimental models of Alzheimer's disease. | Yi, Bitna; Sahn, James J; Ardestani, Pooneh Memar; Evans, Andrew K; Scott, Luisa L; Chan, Jessica Z; Iyer, Sangeetha; Crisp, Ashley; Zuniga, Gabriella; Pierce, Jonathan T; Martin, Stephen F; Shamloo, Mehrdad | Journal of neurochemistry. | 2017 Feb; | 27926996 | |
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| Combine and Conquer: Double CTLA-4 and PD-1 Blockade Combined with Whole Tumor Antigen Vaccine Cooperate to Eradicate Tumors. | Homicsko, Krisztian; Duraiswamy, Jaikumar; Doucey, Marie-Agnès; Coukos, George | Cancer research. | 2016 12 01; | 27909064 | |
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| Potential of Small Molecule-Mediated Reprogramming of Rod Photoreceptors to Treat Retinitis Pigmentosa. | Nakamura, Paul A; Tang, Shibing; Shimchuk, Andy A; Ding, Sheng; Reh, Thomas A | Investigative ophthalmology & visual science. | 2016 11 01; | 27893103 | |
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| Sodium nitroprusside enhanced cardiopulmonary resuscitation improves short term survival in a porcine model of ischemic refractory ventricular fibrillation. | Yannopoulos, Demetris; Bartos, Jason A; George, Stephen A; Sideris, George; Voicu, Sebastian; Oestreich, Brett; Matsuura, Timothy; Shekar, Kadambari; Rees, Jennifer; Aufderheide, Tom P | Resuscitation. | 2017 Jan; | 27771299 | |
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| Design of Selective Substrates and Activity-Based Probes for Hydrolase Important for Pathogenesis 1 (HIP1) from Mycobacterium tuberculosis. | Lentz, Christian S; Ordonez, Alvaro A; Kasperkiewicz, Paulina; La Greca, Florencia; O'Donoghue, Anthony J; Schulze, Christopher J; Powers, James C; Craik, Charles S; Drag, Marcin; Jain, Sanjay K; Bogyo, Matthew | ACS infectious diseases. | 2016 11 11; | 27739665 | |
| Combination of an Integrin-Targeting NIR Tracer and an Ultrasensitive Spectroscopic Device for Intraoperative Detection of Head and Neck Tumor Margins and Metastatic Lymph Nodes. | Yoon, Younghyoun; Mohs, Aaron M; Mancini, Michael C; Nie, Shuming; Shim, Hyunsuk | Tomography : a journal for imaging research. | 2016 Sep; | 27738656 | |
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| TREM2 Haplodeficiency in Mice and Humans Impairs the Microglia Barrier Function Leading to Decreased Amyloid Compaction and Severe Axonal Dystrophy. | Yuan, Peng; Condello, Carlo; Keene, C Dirk; Wang, Yaming; Bird, Thomas D; Paul, Steven M; Luo, Wenjie; Colonna, Marco; Baddeley, David; Grutzendler, Jaime | Neuron. | 2016 10 05; | 27710785 | |
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| Man's Best Friend: Utilizing Naturally Occurring Tumors in Dogs to Improve Chimeric Antigen Receptor T-cell Therapy for Human Cancers. | Mata, Melinda; Gottschalk, Stephen | Molecular therapy : the journal of the American Society of Gene Therapy. | 2016 Sep; | 27687136 | |
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| A Closed Loop Brain-machine Interface for Epilepsy Control Using Dorsal Column Electrical Stimulation. | Pais-Vieira, Miguel; Yadav, Amol P; Moreira, Derek; Guggenmos, David; Santos, Amílcar; Lebedev, Mikhail; Nicolelis, Miguel A L | Scientific reports. | 2016 Sep 08; | 27605389 | |
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| RIPK3 Activates Parallel Pathways of MLKL-Driven Necroptosis and FADD-Mediated Apoptosis to Protect against Influenza A Virus. | Nogusa, Shoko; Thapa, Roshan J; Dillon, Christopher P; Liedmann, Swantje; Oguin 3rd, Thomas H; Ingram, Justin P; Rodriguez, Diego A; Kosoff, Rachelle; Sharma, Shalini; Sturm, Oliver; Verbist, Katherine; Gough, Peter J; Bertin, John; Hartmann, Boris M; Sea | Cell host & microbe. | 2016 Jul 13; | 27321907 | |
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| Metabolomics-assisted proteomics identifies succinylation and SIRT5 as important regulators of cardiac function. | Sadhukhan, Sushabhan; Liu, Xiaojing; Ryu, Dongryeol; Nelson, Ornella D; Stupinski, John A; Li, Zhi; Chen, Wei; Zhang, Sheng; Weiss, Robert S; Locasale, Jason W; Auwerx, Johan; Lin, Hening | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Apr 19; | 27051063 | |
| PAPERCLIP Identifies MicroRNA Targets and a Role of CstF64/64tau in Promoting Non-canonical poly(A) Site Usage. | Hwang, Hun-Way; Park, Christopher Y; Goodarzi, Hani; Fak, John J; Mele, Aldo; Moore, Michael J; Saito, Yuhki; Darnell, Robert B | Cell reports. | 2016 Apr 12; | 27050522 | |
| A neuronal circuit for colour vision based on rod-cone opponency. | Joesch, Maximilian; Meister, Markus | Nature. | 2016 Apr 14; | 27049951 | |
| The Power of Engaging Citizen Scientists for Scientific Progress. | Garbarino, Jeanne; Mason, Christopher E | Journal of microbiology & biology education. | 2016 Mar; | 27047581 | |
| Metabolomic network analysis of estrogen-stimulated MCF-7 cells: a comparison of overrepresentation analysis, quantitative enrichment analysis and pathway analysis versus metabolite network analysis. | Maertens, Alexandra; Bouhifd, Mounir; Zhao, Liang; Odwin-DaCosta, Shelly; Kleensang, Andre; Yager, James D; Hartung, Thomas | Archives of toxicology. | 2016 Apr 2; | 27039105 | |
| A primerless molecular diagnostic: phosphorothioated-terminal hairpin formation and self-priming extension (PS-THSP). | Jung, Cheulhee; Ellington, Andrew D | Analytical and bioanalytical chemistry. | 2016 Dec; | 27032410 | |
| Quantitative super-resolution imaging with qPAINT. | Jungmann, Ralf; Avendaño, Maier S; Dai, Mingjie; Woehrstein, Johannes B; Agasti, Sarit S; Feiger, Zachary; Rodal, Avital; Yin, Peng | Nature methods. | 2016 May; | 27018580 | |
| The Fuzzy Logic of Network Connectivity in Mouse Visual Thalamus. | Morgan, Josh Lyskowski; Berger, Daniel Raimund; Wetzel, Arthur Willis; Lichtman, Jeff William | Cell. | 2016 Mar 24; | 27015312 | |
| Rapid and Long-Term Immunity Elicited by DNA-Encoded Antibody Prophylaxis and DNA Vaccination Against Chikungunya Virus. | Muthumani, Karuppiah; Block, Peter; Flingai, Seleeke; Muruganantham, Nagarajan; Chaaithanya, Itta Krishna; Tingey, Colleen; Wise, Megan; Reuschel, Emma L; Chung, Christopher; Muthumani, Abirami; Sarangan, Gopalsamy; Srikanth, Padma; Khan, Amir S; Vijayachari, Paluru; Sardesai, Niranjan Y; Kim, J Joseph; Ugen, Kenneth E; Weiner, David B | The Journal of infectious diseases. | 2016 Aug 01; | 27001960 | |
| Conditional deletion of L1CAM in human neurons impairs both axonal and dendritic arborization and action potential generation. | Patzke, Christopher; Acuna, Claudio; Giam, Louise R; Wernig, Marius; Südhof, Thomas C | The Journal of experimental medicine. | 2016 Apr 04; | 27001749 | |
| Modeling the integration of bacterial rRNA fragments into the human cancer genome. | Sieber, Karsten B; Gajer, Pawel; Dunning Hotopp, Julie C | BMC bioinformatics. | 2016; | 27001685 | |
| UTX in muscle regeneration - the right dose and the right time. | Liu, Ling; Rando, Thomas A | The Journal of clinical investigation. | 2016 Apr 1; | 26999609 | |
| T cell-intrinsic ASC critically promotes T(H)17-mediated experimental autoimmune encephalomyelitis. | Martin, Bradley N; Wang, Chenhui; Zhang, Cun-jin; Kang, Zizhen; Gulen, Muhammet Fatih; Zepp, Jarod A; Zhao, Junjie; Bian, Guanglin; Do, Jeong-su; Min, Booki; Pavicic Jr, Paul G; El-Sanadi, Caroline; Fox, Paul L; Akitsu, Aoi; Iwakura, Yoichiro; Sarkar, Ana | Nature immunology. | 2016 May; | 26998763 | |
| A Neural Basis for Control of Cichlid Female Reproductive Behavior by Prostaglandin F2?. | Juntti, Scott A; Hilliard, Austin T; Kent, Kai R; Kumar, Anusha; Nguyen, Andrew; Jimenez, Mariana A; Loveland, Jasmine L; Mourrain, Philippe; Fernald, Russell D | Current biology : CB. | 2016 Apr 4; | 26996507 | |
| A Three-Enzyme Pathway with an Optimised Geometric Arrangement to Facilitate Substrate Transfer. | Liu, Minghui; Fu, Jinglin; Qi, Xiaodong; Wootten, Shaun; Woodbury, Neal W; Liu, Yan; Yan, Hao | Chembiochem : a European journal of chemical biology. | 2016 06 16; | 26995014 | |
| Physostigmine and Methylphenidate Induce Distinct Arousal States During Isoflurane General Anesthesia in Rats. | Kenny, Jonathan D; Chemali, Jessica J; Cotten, Joseph F; Van Dort, Christa J; Kim, Seong-Eun; Ba, Demba; Taylor, Norman E; Brown, Emery N; Solt, Ken | Anesthesia and analgesia. | 2016 Mar 17; | 26991753 | |
| A SIRT2-Selective Inhibitor Promotes c-Myc Oncoprotein Degradation and Exhibits Broad Anticancer Activity. | Jing, Hui; Hu, Jing; He, Bin; Negrón Abril, Yashira L; Stupinski, Jack; Weiser, Keren; Carbonaro, Marisa; Chiang, Ying-Ling; Southard, Teresa; Giannakakou, Paraszkevi; Weiss, Robert S; Lin, Hening | Cancer cell. | 2016 Mar 14; | 26977881 | |
| Focusing light through scattering media by full-polarization digital optical phase conjugation. | Shen, Yuecheng; Liu, Yan; Ma, Cheng; Wang, Lihong V | Optics letters. | 2016 Mar 15; | 26977651 | |
| Hybrid Microscopy: Enabling Inexpensive High-Performance Imaging through Combined Physical and Optical Magnifications. | Zhang, Yu Shrike; Chang, Jae-Byum; Alvarez, Mario Moisés; Trujillo-de Santiago, Grissel; Aleman, Julio; Batzaya, Byambaa; Krishnadoss, Vaishali; Ramanujam, Aishwarya Aravamudhan; Kazemzadeh-Narbat, Mehdi; Chen, Fei; Tillberg, Paul W; Dokmeci, Mehmet Remzi | Scientific reports. | 2016; | 26975883 | |
| The microbiome and its potential as a cancer preventive intervention. | Bultman, Scott J | Seminars in oncology. | 2016 Feb; | 26970128 | |
| Autism-associated SHANK3 haploinsufficiency causes Ih channelopathy in human neurons. | Yi, Fei; Danko, Tamas; Botelho, Salome Calado; Patzke, Christopher; Pak, ChangHui; Wernig, Marius; Südhof, Thomas C | Science (New York, N.Y.). | 2016 May 6; | 26966193 | |
| A Broad RNA Virus Survey Reveals Both miRNA Dependence and Functional Sequestration. | Scheel, Troels K H; Luna, Joseph M; Liniger, Matthias; Nishiuchi, Eiko; Rozen-Gagnon, Kathryn; Shlomai, Amir; Auray, Gaël; Gerber, Markus; Fak, John; Keller, Irene; Bruggmann, Rémy; Darnell, Robert B; Ruggli, Nicolas; Rice, Charles M | Cell host & microbe. | 2016 Mar 9; | 26962949 | |
| Application of the TGx-28.65 transcriptomic biomarker to classify genotoxic and non-genotoxic chemicals in human TK6 cells in the presence of rat liver S9. | Yauk, Carole L; Buick, Julie K; Williams, Andrew; Swartz, Carol D; Recio, Leslie; Li, Heng-Hong; Fornace Jr, Albert J; Thomson, Errol M; Aubrecht, Jiri | Environmental and molecular mutagenesis. | 2016 May; | 26946220 | |
| Neurovascular and Immuno-Imaging: From Mechanisms to Therapies. Proceedings of the Inaugural Symposium. | Akassoglou, Katerina; Agalliu, Dritan; Chang, Christopher J; Davalos, Dimitrios; Grutzendler, Jaime; Hillman, Elizabeth M C; Khakh, Baljit S; Kleinfeld, David; McGavern, Dorian B; Nelson, Sarah J; Zlokovic, Berislav V | Frontiers in neuroscience. | 2016; | 26941593 | |
| Assembly and operation of the autopatcher for automated intracellular neural recording in vivo. | Kodandaramaiah, Suhasa B; Holst, Gregory L; Wickersham, Ian R; Singer, Annabelle C; Franzesi, Giovanni Talei; McKinnon, Michael L; Forest, Craig R; Boyden, Edward S | Nature protocols. | 2016 Apr; | 26938115 | |
| Helicobacter pylori in children with asthmatic conditions at school age, and their mothers. | den Hollander, W J; Sonnenschein-van der Voort, A M M; Holster, I L; de Jongste, J C; Jaddoe, V W; Hofman, A; Perez-Perez, G I; Moll, H A; Blaser, M J; Duijts, L; Kuipers, E J | Alimentary pharmacology & therapeutics. | 2016 Mar 1; | 26932510 | |
| Functional and topological diversity of LOV domain photoreceptors. | Glantz, Spencer T; Carpenter, Eric J; Melkonian, Michael; Gardner, Kevin H; Boyden, Edward S; Wong, Gane Ka-Shu; Chow, Brian Y | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Mar 15; | 26929367 | |
| Activating Peptides for Cellular Uptake via Polymerization into High Density Brushes. | Blum, Angela P; Kammeyer, Jacquelin K; Gianneschi, Nathan C | Chemical science (Royal Society of Chemistry : 2010). | 2016 Feb 1; | 989-994 | 26925209 |
| The Human Toxome Collaboratorium: A Shared Environment for Multi-Omic Computational Collaboration within a Consortium. | Fasani, Rick A; Livi, Carolina B; Choudhury, Dipanwita R; Kleensang, Andre; Bouhifd, Mounir; Pendse, Salil N; McMullen, Patrick D; Andersen, Melvin E; Hartung, Thomas; Rosenberg, Michael | Frontiers in pharmacology. | 2015; | 26924983 | |
| Morphologic effects of estrogen stimulation on 3D MCF-7 microtissues. | Vantangoli, Marguerite M; Wilson, Shelby; Madnick, Samantha J; Huse, Susan M; Boekelheide, Kim | Toxicology letters. | 2016 Apr 25; | 26921789 | |
| Hypoxia as a therapy for mitochondrial disease. | Jain, Isha H; Zazzeron, Luca; Goli, Rahul; Alexa, Kristen; Schatzman-Bone, Stephanie; Dhillon, Harveen; Goldberger, Olga; Peng, Jun; Shalem, Ophir; Sanjana, Neville E; Zhang, Feng; Goessling, Wolfram; Zapol, Warren M; Mootha, Vamsi K | Science (New York, N.Y.). | 2016 Apr 1; | 26917594 | |
| Analogous Convergence of Sustained and Transient Inputs in Parallel On and Off Pathways for Retinal Motion Computation. | Greene, Matthew J; Kim, Jinseop S; Seung, H Sebastian; EyeWirers | Cell reports. | 2016 Mar 01; | 26904938 | |
| The Development and Analysis of Integrated Neuroscience Data. | Glaser, Joshua I; Kording, Konrad P | Frontiers in computational neuroscience. | 2016; | 26903852 | |
| The effect of biomechanical variables on force sensitive resistor error: Implications for calibration and improved accuracy. | Schofield, Jonathon S; Evans, Katherine R; Hebert, Jacqueline S; Marasco, Paul D; Carey, Jason P | Journal of biomechanics. | 2016 Mar 21; | 26903413 | |
| Autoantibodies against homocysteinylated protein in a mouse model of folate deficiency-induced neural tube defects. | Denny, Kerina J; Kelly, Christina F; Kumar, Vinod; Witham, Katey L; Cabrera, Robert M; Finnell, Richard H; Taylor, Stephen M; Jeanes, Angela; Woodruff, Trent M | Birth defects research. Part A, Clinical and molecular teratology. | 2016 Mar; | 26900104 | |
| Regulatory consequences of neuronal ELAV-like protein binding to coding and non-coding RNAs in human brain. | Scheckel, Claudia; Drapeau, Elodie; Frias, Maria A; Park, Christopher Y; Fak, John; Zucker-Scharff, Ilana; Kou, Yan; Haroutunian, Vahram; Ma'ayan, Avi; Buxbaum, Joseph D; Darnell, Robert B | eLife. | 2016; | 26894958 | |
| Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons. | Krishnaswami, Suguna Rani; Grindberg, Rashel V; Novotny, Mark; Venepally, Pratap; Lacar, Benjamin; Bhutani, Kunal; Linker, Sara B; Pham, Son; Erwin, Jennifer A; Miller, Jeremy A; Hodge, Rebecca; McCarthy, James K; Kelder, Martin; McCorrison, Jamison; Aevermann, Brian D; Fuertes, Francisco Diez; Scheuermann, Richard H; Lee, Jun; Lein, Ed S; Schork, Nicholas; McConnell, Michael J; Gage, Fred H; Lasken, Roger S | Nature protocols. | 2016 Mar; | 26890679 | |
| Mapping of Variable DNA Methylation Across Multiple Cell Types Defines a Dynamic Regulatory Landscape of the Human Genome. | Gu, Junchen; Stevens, Michael; Xing, Xiaoyun; Li, Daofeng; Zhang, Bo; Payton, Jacqueline E; Oltz, Eugene M; Jarvis, James N; Jiang, Kaiyu; Cicero, Theodore; Costello, Joseph F; Wang, Ting | G3 (Bethesda) | 2016 | P:973-86 | 26888867 |
| Fibroblast Growth Factor 2 Regulates High Mobility Group A2 Expression in Human Bone Marrow-Derived Mesenchymal Stem Cells. | Kalomoiris, Stefanos; Cicchetto, Andrew C; Lakatos, Kinga; Nolta, Jan A; Fierro, Fernando A | Journal of cellular biochemistry. | 2016 Sep; | 26888666 | |
| Near-infrared operating lamp for intraoperative molecular imaging of a mediastinal tumor. | Keating, Jane; Judy, Ryan; Newton, Andrew; Singhal, Sunil | BMC medical imaging. | 2016; | 26883511 | |
| Photoacoustic microscopy of arteriovenous shunts and blood diffusion in early-stage tumors. | Yeh, Chenghung; Liang, Jinyang; Zhou, Yong; Hu, Song; Sohn, Rebecca E; Arbeit, Jeffrey M; Wang, Lihong V | Journal of biomedical optics. | 2016 Feb; | 26882446 | |
| Structure and Engineering of Francisella novicida Cas9. | Hirano, Hisato; Gootenberg, Jonathan S; Horii, Takuro; Abudayyeh, Omar O; Kimura, Mika; Hsu, Patrick D; Nakane, Takanori; Ishitani, Ryuichiro; Hatada, Izuho; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu | Cell. | 2016 Feb 25; | 26875867 | |
| Photoacoustic elastography. | Hai, Pengfei; Yao, Junjie; Li, Guo; Li, Chiye; Wang, Lihong V | Optics letters. | 2016 Feb 15; | 26872173 | |
| Spatially resolved proteomic mapping in living cells with the engineered peroxidase APEX2. | Hung, Victoria; Udeshi, Namrata D; Lam, Stephanie S; Loh, Ken H; Cox, Kurt J; Pedram, Kayvon; Carr, Steven A; Ting, Alice Y | Nature protocols. | 2016 Mar; | 26866790 | |
| A computational approach to studying ageing at the individual level. | Harvanek, Zachary M; Mourão, Márcio A; Schnell, Santiago; Pletcher, Scott D | Proceedings. Biological sciences / The Royal Society. | 2016 Feb 10; | 26865300 | |
| Clonal Immunoglobulin against Lysolipids in the Origin of Myeloma. | Nair, Shiny; Branagan, Andrew R; Liu, Jun; Boddupalli, Chandra Sekhar; Mistry, Pramod K; Dhodapkar, Madhav V | The New England journal of medicine. | 2016 Feb 11; | 555-61 | 26863356 |
| Nanocaged enzymes with enhanced catalytic activity and increased stability against protease digestion. | Zhao, Zhao; Fu, Jinglin; Dhakal, Soma; Johnson-Buck, Alexander; Liu, Minghui; Zhang, Ting; Woodbury, Neal W; Liu, Yan; Walter, Nils G; Yan, Hao | Nature communications. | 2016; | 26861509 | |
| A Bayesian nonparametric approach for uncovering rat hippocampal population codes during spatial navigation. | Linderman, Scott W; Johnson, Matthew J; Wilson, Matthew A; Chen, Zhe | Journal of neuroscience methods. | 2016 Feb 5; | 36-47 | 26854398 |
| Allele-Specific Reduction of the Mutant Huntingtin Allele Using Transcription Activator-Like Effectors in Human Huntington's Disease Fibroblasts. | Fink, Kyle D; Deng, Peter; Gutierrez, Josh; Anderson, Joseph S; Torrest, Audrey; Komarla, Anvita; Kalomoiris, Stefanos; Cary, Whitney; Anderson, Johnathon D; Gruenloh, William; Duffy, Alexandra; Tempkin, Teresa; Annett, Geralyn; Wheelock, Vicki; Segal, David J; Nolta, Jan A | Cell transplantation. | 2016; | 26850319 | |
| Extracellular matrix mediators of metastatic cell colonization characterized using scaffold mimics of the pre-metastatic niche. | Aguado, Brian A; Caffe, Jordan R; Nanavati, Dhaval; Rao, Shreyas S; Bushnell, Grace G; Azarin, Samira M; Shea, Lonnie D | Acta biomaterialia. | 2016 Mar 15; | 13-24 | 26844426 |
| Stress-induced activation of brown adipose tissue prevents obesity in conditions of low adaptive thermogenesis. | Razzoli, Maria; Frontini, Andrea; Gurney, Allison; Mondini, Eleonora; Cubuk, Cankut; Katz, Liora S; Cero, Cheryl; Bolan, Patrick J; Dopazo, Joaquin; Vidal-Puig, Antonio; Cinti, Saverio; Bartolomucci, Alessandro | Molecular metabolism. | 2016 Jan; | 19-33 | 26844204 |
| Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius. | Rosenfeld, Jeffrey A; Reeves, Darryl; Brugler, Mercer R; Narechania, Apurva; Simon, Sabrina; Durrett, Russell; Foox, Jonathan; Shianna, Kevin; Schatz, Michael C; Gandara, Jorge; Afshinnekoo, Ebrahim; Lam, Ernest T; Hastie, Alex R; Chan, Saki; Cao, Han; Saghbini, Michael; Kentsis, Alex; Planet, Paul J; Kholodovych, Vladyslav; Tessler, Michael; Baker, Richard; DeSalle, Rob; Sorkin, Louis N; Kolokotronis, Sergios-Orestis; Siddall, Mark E; Amato, George; Mason, Christopher E | Nature communications. | 2016; | 26836631 | |
| Precision Tumor Recognition by T Cells With Combinatorial Antigen-Sensing Circuits. | Roybal, Kole T; Rupp, Levi J; Morsut, Leonardo; Walker, Whitney J; McNally, Krista A; Park, Jason S; Lim, Wendell A | Cell. | 2016 Feb 11; | 770-9 | 26830879 |
| Engineering Customized Cell Sensing and Response Behaviors Using Synthetic Notch Receptors. | Morsut, Leonardo; Roybal, Kole T; Xiong, Xin; Gordley, Russell M; Coyle, Scott M; Thomson, Matthew; Lim, Wendell A | Cell. | 2016 Feb 11; | 780-91 | 26830878 |
| Partial restoration of the microbiota of cesarean-born infants via vaginal microbial transfer. | Dominguez-Bello, Maria G; De Jesus-Laboy, Kassandra M; Shen, Nan; Cox, Laura M; Amir, Amnon; Gonzalez, Antonio; Bokulich, Nicholas A; Song, Se Jin; Hoashi, Marina; Rivera-Vinas, Juana I; Mendez, Keimari; Knight, Rob; Clemente, Jose C | Nature medicine. | 2016 Mar; | 26828196 | |
| Genes with monoallelic expression contribute disproportionately to genetic diversity in humans. | Savova, Virginia; Chun, Sung; Sohail, Mashaal; McCole, Ruth B; Witwicki, Robert; Gai, Lisa; Lenz, Tobias L; Wu, C-ting; Sunyaev, Shamil R; Gimelbrant, Alexander A | Nature genetics. | 2016 Mar; | 26808112 | |
| Celecoxib does not alter intestinal microbiome in a longitudinal diet-controlled study. | Bokulich, N A; Battaglia, T; Aleman, J O; Walker, J M; Blaser, M J; Holt, P R | Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases. | 2016 May; | 26806255 | |
| Angiocrine functions of organ-specific endothelial cells. | Rafii, Shahin; Butler, Jason M; Ding, Bi-Sen | Nature. | 2016 Jan 21; | 316-25 | 26791722 |
| SutA is a bacterial transcription factor expressed during slow growth in Pseudomonas aeruginosa. | Babin, Brett M; Bergkessel, Megan; Sweredoski, Michael J; Moradian, Annie; Hess, Sonja; Newman, Dianne K; Tirrell, David A | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Feb 2; | 26787849 | |
| Stem cells and healthy aging. | Goodell, Margaret A; Rando, Thomas A | Science (New York, N.Y.). | 2015 Dec 4; | 1199-204 | 26785478 |
| Comprehensive Proteomic Analysis of Mesenchymal Stem Cell Exosomes Reveals Modulation of Angiogenesis via Nuclear Factor-KappaB Signaling. | Anderson, Johnathon D; Johansson, Henrik J; Graham, Calvin S; Vesterlund, Mattias; Pham, Missy T; Bramlett, Charles S; Montgomery, Elizabeth N; Mellema, Matt S; Bardini, Renee L; Contreras, Zelenia; Hoon, Madeline; Bauer, Gerhard; Fink, Kyle D; Fury, Brian; Hendrix, Kyle J; Chedin, Frederic; El-Andaloussi, Samir; Hwang, Billie; Mulligan, Michael S; Lehtiö, Janne; Nolta, Jan A | Stem cells (Dayton, Ohio). | 2016 Mar; | 26782178 | |
| Comparison of the peptide binding preferences of three closely related TRAF paralogs: TRAF2, TRAF3, and TRAF5. | Foight, Glenna Wink; Keating, Amy E | Protein science : a publication of the Protein Society. | 2016 Jan 18; | 26779844 | |
| REPRODUCIBLE RESEARCH WORKFLOW IN R FOR THE ANALYSIS OF PERSONALIZED HUMAN MICROBIOME DATA. | Callahan, Benjamin; Proctor, Diana; Relman, David; Fukuyama, Julia; Holmes, Susan | Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. | 2016; | 183-94 | 26776185 |
| Human Mesenchymal Stem Cells Genetically Engineered to Overexpress Brain-derived Neurotrophic Factor Improve Outcomes in Huntington's disease Mouse Models. | Pollock, K; Dahlenburg, H; Nelson, H; Fink, K D; Cary, W; Hendrix, K; Annett, G; Torrest, A; Deng, P; Gutierrez, J; Nacey, C; Pepper, K; Kalomoiris, S; Anderson, J D; McGee, J L; Gruenloh, W; Fury, B; Bauer, G; Duffy, A; Tempkin, T; Wheelock, V; Nolta, J A | Molecular therapy : the journal of the American Society of Gene Therapy. | 2016 Jan 14; | 26765769 | |
| BMI1 Regulation of Self-Renewal and Multipotency in Human Mesenchymal Stem Cells. | Jung, Yunjoon; Nolta, Jan A | Current stem cell research & therapy. | 2016; | 26763885 | |
| Attenuation of ?-Amyloid Deposition and Neurotoxicity by Chemogenetic Modulation of Neural Activity. | Yuan, Peng; Grutzendler, Jaime | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Jan 13; | 26758850 | |
| N(6)-methyladenosine in mRNA disrupts tRNA selection and translation-elongation dynamics. | Choi, Junhong; Ieong, Ka-Weng; Demirci, Hasan; Chen, Jin; Petrov, Alexey; Prabhakar, Arjun; O'Leary, Seán E; Dominissini, Dan; Rechavi, Gideon; Soltis, S Michael; Ehrenberg, Måns; Puglisi, Joseph D | Nature structural & molecular biology. | 2016 Feb; | 26751643 | |
| Genome Editing in Human Pluripotent Stem Cells: Approaches, Pitfalls, and Solutions. | Hendriks, William T; Warren, Curtis R; Cowan, Chad A | Cell stem cell. | 2016 Jan 7; | 53-65 | 26748756 |
| Early Access to the Cardiac Catheterization Laboratory for Patients Resuscitated From Cardiac Arrest Due to a Shockable Rhythm: The Minnesota Resuscitation Consortium Twin Cities Unified Protocol. | Garcia, Santiago; Drexel, Todd; Bekwelem, Wobo; Raveendran, Ganesh; Caldwell, Emily; Hodgson, Lucinda; Wang, Qi; Adabag, Selcuk; Mahoney, Brian; Frascone, Ralph; Helmer, Gregory; Lick, Charles; Conterato, Marc; Baran, Kenneth; Bart, Bradley; Bachour, Fouad; Roh, Steven; Panetta, Carmelo; Stark, Randall; Haugland, Mark; Mooney, Michael; Wesley, Keith; Yannopoulos, Demetris | Journal of the American Heart Association. | 2016; | 26744380 | |
| tRNA is a new target for cleavage by a MazF toxin. | Schifano, Jason M; Cruz, Jonathan W; Vvedenskaya, Irina O; Edifor, Regina; Ouyang, Ming; Husson, Robert N; Nickels, Bryce E; Woychik, Nancy A | Nucleic acids research. | 2016 Feb 18; | 26740583 | |
| Spatial variation in automated burst suppression detection in pharmacologically induced coma. | An, Jingzhi; Jonnalagadda, Durga; Moura, Valdery; Purdon, Patrick L; Brown, Emery N; Westover, M Brandon | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 2015; | 26738009 | |
| Effect of low-expression gene filtering on detection of differentially expressed genes in RNA-seq data. | Sha, Ying; Phan, John H; Wang, May D | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 2015 Aug; | 26737772 | |
| Leveraging historical knowledge of neural dynamics to rescue decoder performance as neural channels are lost: ''Decoder hysteresis''. | Kao, Jonathan C; Ryu, Stephen I; Shenoy, Krishna V | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 2015 08; | 26736448 | |
| Detection of blur artifacts in histopathological whole-slide images of endomyocardial biopsies. | Hang Wu; Phan, John H; Bhatia, Ajay K; Cundiff, Caitlin A; Shehata, Bahig M; Wang, May D | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 2015; | 26736365 | |
| An enhanced cerebral recovery index for coma prognostication following cardiac arrest. | Ghassemi, Mohammad M; Amorim, Edilberto; Pati, Sandipan B; Mark, Roger G; Brown, Emery N; Purdon, Patrick L; Westover, M Brandon | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 2015; | 26736317 | |
| Auto-deleting brain machine interface: Error detection using spiking neural activity in the motor cortex. | Even-Chen, Nir; Stavisky, Sergey D; Kao, Jonathan C; Ryu, Stephen I; Shenoy, Krishna V | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 2015; | 26736203 | |
| Validation of a Low-Cost Paper-Based Screening Test for Sickle Cell Anemia. | Piety, Nathaniel Z; Yang, Xiaoxi; Kanter, Julie; Vignes, Seth M; George, Alex; Shevkoplyas, Sergey S | PloS one. | 2016; | 26735691 | |
| miR-124-9-9* potentiates Ascl1-induced reprogramming of cultured Müller glia. | Wohl, Stefanie Gabriele; Reh, Thomas Andrew | Glia. | 2016 May; | 26732729 | |
| In Vivo Reprogramming for Brain and Spinal Cord Repair. | Chen, Gong; Wernig, Marius; Berninger, Benedikt; Nakafuku, Masato; Parmar, Malin; Zhang, Chun-Li | eNeuro. | 2015 Sep-Oct; | 26730402 | |
| Humanized hemato-lymphoid system mice. | Theocharides, Alexandre P A; Rongvaux, Anthony; Fritsch, Kristin; Flavell, Richard A; Manz, Markus G | Haematologica. | 2016 Jan; | 26721800 | |
| In vivo gene editing in dystrophic mouse muscle and muscle stem cells. | Tabebordbar, Mohammadsharif; Zhu, Kexian; Cheng, Jason K W; Chew, Wei Leong; Widrick, Jeffrey J; Yan, Winston X; Maesner, Claire; Wu, Elizabeth Y; Xiao, Ru; Ran, F Ann; Cong, Le; Zhang, Feng; Vandenberghe, Luk H; Church, George M; Wagers, Amy J | Science (New York, N.Y.). | 2016 Jan 22; | 407-11 | 26721686 |
| In vivo genome editing improves muscle function in a mouse model of Duchenne muscular dystrophy. | Nelson, Christopher E; Hakim, Chady H; Ousterout, David G; Thakore, Pratiksha I; Moreb, Eirik A; Castellanos Rivera, Ruth M; Madhavan, Sarina; Pan, Xiufang; Ran, F Ann; Yan, Winston X; Asokan, Aravind; Zhang, Feng; Duan, Dongsheng; Gersbach, Charles A | Science (New York, N.Y.). | 2016 Jan 22; | 403-7 | 26721684 |
| Photoacoustic tomography of vascular compliance in humans. | Hai, Pengfei; Zhou, Yong; Liang, Jinyang; Li, Chiye; Wang, Lihong V | Journal of biomedical optics. | 2015; | 26720875 | |
| In vivo photoacoustic tomography of myoglobin oxygen saturation. | Lin, Li; Yao, Junjie; Li, Lei; Wang, Lihong V | Journal of biomedical optics. | 2016 Jun; | 26719943 | |
| Trace incorporation of heavy water reveals slow and heterogeneous pathogen growth rates in cystic fibrosis sputum. | Kopf, Sebastian H; Sessions, Alex L; Cowley, Elise S; Reyes, Carmen; Van Sambeek, Lindsey; Hu, Yang; Orphan, Victoria J; Kato, Roberta; Newman, Dianne K | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Jan 12; | 26715741 | |
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| The First-in-Man ''Si Se Puede'' Study for the use of micro-oxygen sensors (MOXYs) to determine dynamic relative oxygen indices in the feet of patients with limb-threatening ischemia during endovascular therapy. | Montero-Baker, Miguel F; Au-Yeung, Kit Yee; Wisniewski, Natalie A; Gamsey, Soya; Morelli-Alvarez, Luis; Mills Sr, Joseph L; Campos, Marianella; Helton, Kristen L | Journal of vascular surgery. | 2015 Jun; | 1501-9.e1 | 26004327 |
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| Adaptation to elastic loads and BMI robot controls during rat locomotion examined with point-process GLMs. | Song, Weiguo; Cajigas, Iahn; Brown, Emery N; Giszter, Simon F | Frontiers in systems neuroscience. | 2015; | 62 | 25972789 |
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| Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes. | Beliveau, Brian J; Boettiger, Alistair N; Avendaño, Maier S; Jungmann, Ralf; McCole, Ruth B; Joyce, Eric F; Kim-Kiselak, Caroline; Bantignies, Frédéric; Fonseka, Chamith Y; Erceg, Jelena; Hannan, Mohammed A; Hoang, Hien G; Colognori, David; Lee, Jeannie T; Shih, William M; Yin, Peng; Zhuang, Xiaowei; Wu, Chao-ting | Nature communications. | 2015; | 7147 | 25962338 |
| Common clonal origin of central and resident memory T cells following skin immunization. | Gaide, Olivier; Emerson, Ryan O; Jiang, Xiaodong; Gulati, Nicholas; Nizza, Suzanne; Desmarais, Cindy; Robins, Harlan; Krueger, James G; Clark, Rachael A; Kupper, Thomas S | Nature medicine. | 2015 Jun; | 647-53 | 25962122 |
| Ventral hippocampal afferents to the nucleus accumbens regulate susceptibility to depression. | Bagot, Rosemary C; Parise, Eric M; Peña, Catherine J; Zhang, Hong-Xing; Maze, Ian; Chaudhury, Dipesh; Persaud, Brianna; Cachope, Roger; Bolaños-Guzmán, Carlos A; Cheer, Joseph F; Cheer, Joseph; Deisseroth, Karl; Han, Ming-Hu; Nestler, Eric J | Nature communications. | 2015; | 7062 | 25952660 |
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| A high performing brain-machine interface driven by low-frequency local field potentials alone and together with spikes. | Stavisky, Sergey D; Kao, Jonathan C; Nuyujukian, Paul; Ryu, Stephen I; Shenoy, Krishna V | Journal of neural engineering. | 2015 Jun; | 36009 | 25946198 |
| Pandemic Swine-Origin H1N1 Influenza Virus Replicates to Higher Levels and Induces More Fever and Acute Inflammatory Cytokines in Cynomolgus versus Rhesus Monkeys and Can Replicate in Common Marmosets. | Mooij, Petra; Koopman, Gerrit; Mortier, Daniëlla; van Heteren, Melanie; Oostermeijer, Herman; Fagrouch, Zahra; de Laat, Rudy; Kobinger, Gary; Li, Yan; Remarque, Edmond J; Kondova, Ivanela; Verschoor, Ernst J; Bogers, Willy M J M | PloS one. | 2015; | 25946071 | |
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| Quantifying Pituitary-Adrenal Dynamics and Deconvolution of Concurrent Cortisol and Adrenocorticotropic Hormone Data by Compressed Sensing. | Faghih, Rose; Dahleh, Munther; Adler, Gail; Klerman, Elizabeth; Brown, Emery | IEEE transactions on bio-medical engineering. | 2015 Apr 29; | 25935025 | |
| Harnessing the Early-Life Microbiota to Protect Children with Cystic Fibrosis. | Segal, Leopoldo N; Blaser, Martin J | The Journal of pediatrics. | 2015 Jul; | 16-18.e1 | 25934071 |
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| Randomized Sham Controlled Double-blind Trial of Repetitive Transcranial Magnetic Stimulation for Adults With Severe Tourette Syndrome. | Landeros-Weisenberger, Angeli; Mantovani, Antonio; Motlagh, Maria G; de Alvarenga, Pedro Gomes; Katsovich, Liliya; Leckman, James F; Lisanby, Sarah H | Brain stimulation. | 2015 May-Jun; | 574-81 | 25912296 |
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| Delta frequency optogenetic stimulation of the thalamic nucleus reuniens is sufficient to produce working memory deficits: relevance to schizophrenia. | Duan, Aranda R; Varela, Carmen; Zhang, Yuchun; Shen, Yinghua; Xiong, Lealia; Wilson, Matthew A; Lisman, John | Biological psychiatry. | 2015 Jun 15; | 1098-107 | 25891221 |
| Molecular adjuvant IL-33 enhances the potency of a DNA vaccine in a lethal challenge model. | Villarreal, Daniel O; Svoronos, Nikolaos; Wise, Megan C; Shedlock, Devon J; Morrow, Matthew P; Conejo-Garcia, Jose R; Weiner, David B | Vaccine. | 2015 Aug 20; | 4313-20 | 25887087 |
| Adaptive Physiological Response to Perceived Scarcity as a Mechanism of Sensory Modulation of Life Span. | Waterson, Michael J; Chan, Tammy P; Pletcher, Scott D | The journals of gerontology. Series A, Biological sciences and medical sciences. | 2015 Sep; | 1088-91 | 25878032 |
| Three-dimensional photoacoustic endoscopic imaging of the rabbit esophagus. | Yang, Joon Mo; Favazza, Christopher; Yao, Junjie; Chen, Ruimin; Zhou, Qifa; Shung, K Kirk; Wang, Lihong V | PloS one. | 2015; | e0120269 | 25874640 |
| Mutational cooperativity linked to combinatorial epigenetic gain of function in acute myeloid leukemia. | Shih, Alan H; Jiang, Yanwen; Meydan, Cem; Shank, Kaitlyn; Pandey, Suveg; Barreyro, Laura; Antony-Debre, Ileana; Viale, Agnes; Socci, Nicholas; Sun, Yongming; Robertson, Alexander; Cavatore, Magali; de Stanchina, Elisa; Hricik, Todd; Rapaport, Franck; Woods, Brittany; Wei, Chen; Hatlen, Megan; Baljevic, Muhamed; Nimer, Stephen D; Tallman, Martin; Paietta, Elisabeth; Cimmino, Luisa; Aifantis, Iannis; Steidl, Ulrich; Mason, Chris; Melnick, Ari; Levine, Ross L | Cancer cell. | 2015 Apr 13; | 502-15 | 25873173 |
| Neuronal medium that supports basic synaptic functions and activity of human neurons in vitro. | Bardy, Cedric; van den Hurk, Mark; Eames, Tameji; Marchand, Cynthia; Hernandez, Ruben V; Kellogg, Mariko; Gorris, Mark; Galet, Ben; Palomares, Vanessa; Brown, Joshua; Bang, Anne G; Mertens, Jerome; Böhnke, Lena; Boyer, Leah; Simon, Suzanne; Gage, Fred H | Proceedings of the National Academy of Sciences of the United States of America. | 2015 May 19; | E2725-34 | 25870293 |
| Second-hand eating? Maternal perception of the food environment affects reproductive investment in mice. | Schwartz, Tonia S; Gainer, Renee; Dohm, Erik D; Johnson, Maria S; Wyss, J Michael; Allison, David B | Obesity (Silver Spring, Md.). | 2015 May; | 927-30 | 25864567 |
| Developing injectable nanomaterials to repair the heart. | Nguyen, Mary M; Gianneschi, Nathan C; Christman, Karen L | Current opinion in biotechnology. | 2015 Aug; | 225-31 | 25863496 |
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| Closed-loop, ultraprecise, automated craniotomies. | Pak, Nikita; Siegle, Joshua H; Kinney, Justin P; Denman, Daniel J; Blanche, Timothy J; Boyden, Edward S | Journal of neurophysiology. | 2015 Jun 1; | 3943-53 | 25855700 |
| Mapping synapses by conjugate light-electron array tomography. | Collman, Forrest; Buchanan, JoAnn; Phend, Kristen D; Micheva, Kristina D; Weinberg, Richard J; Smith, Stephen J | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2015 Apr 8; | 5792-807 | 25855189 |
| MPTP's pathway of toxicity indicates central role of transcription factor SP1. | Maertens, Alexandra; Luechtefeld, Thomas; Kleensang, Andre; Hartung, Thomas | Archives of toxicology. | 2015 May; | 743-55 | 25851821 |
| In vivo genome editing using Staphylococcus aureus Cas9. | Ran, F Ann; Cong, Le; Yan, Winston X; Scott, David A; Gootenberg, Jonathan S; Kriz, Andrea J; Zetsche, Bernd; Shalem, Ophir; Wu, Xuebing; Makarova, Kira S; Koonin, Eugene V; Sharp, Phillip A; Zhang, Feng | Nature. | 2015 Apr 9; | 186-91 | 25830891 |
| Ubiquitous promoter-localization of essential virulence regulators in Francisella tularensis. | Ramsey, Kathryn M; Osborne, Melisa L; Vvedenskaya, Irina O; Su, Cathy; Nickels, Bryce E; Dove, Simon L | PLoS pathogens. | 2015 Apr; | e1004793 | 25830507 |
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| High-speed label-free functional photoacoustic microscopy of mouse brain in action. | Yao, Junjie; Wang, Lidai; Yang, Joon-Mo; Maslov, Konstantin I; Wong, Terence T W; Li, Lei; Huang, Chih-Hsien; Zou, Jun; Wang, Lihong V | Nature methods. | 2015 May; | 407-10 | 25822799 |
| Structural basis for molecular discrimination by a 3',3'-cGAMP sensing riboswitch. | Ren, Aiming; Wang, Xin C; Kellenberger, Colleen A; Rajashankar, Kanagalaghatta R; Jones, Roger A; Hammond, Ming C; Patel, Dinshaw J | Cell reports. | 2015 Apr 7; | 25818298 | |
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| The in vivo dynamics of antigenic variation in Trypanosoma brucei. | Mugnier, Monica R; Cross, George A M; Papavasiliou, F Nina | Science (New York, N.Y.). | 2015 Mar 27; | 25814582 | |
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| Sputum glucose and glycemic control in cystic fibrosis-related diabetes: a cross-sectional study. | Van Sambeek, Lindsey; Cowley, Elise S; Newman, Dianne K; Kato, Roberta | PloS one. | 2015; | e0119938 | 25803537 |
| FBN-1, a fibrillin-related protein, is required for resistance of the epidermis to mechanical deformation during C. elegans embryogenesis. | Kelley, Melissa; Yochem, John; Krieg, Michael; Calixto, Andrea; Heiman, Maxwell G; Kuzmanov, Aleksandra; Meli, Vijaykumar; Chalfie, Martin; Goodman, Miriam B; Shaham, Shai; Frand, Alison; Fay, David S | eLife. | 2015; | 25798732 | |
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| Large-scale automatic reconstruction of neuronal processes from electron microscopy images. | Kaynig, Verena; Vazquez-Reina, Amelio; Knowles-Barley, Seymour; Roberts, Mike; Jones, Thouis R; Kasthuri, Narayanan; Miller, Eric; Lichtman, Jeff; Pfister, Hanspeter | Medical image analysis. | 2015 May; | 77-88 | 25791436 |
| Human skin is protected by four functionally and phenotypically discrete populations of resident and recirculating memory T cells. | Watanabe, Rei; Gehad, Ahmed; Yang, Chao; Scott, Laura L; Teague, Jessica E; Schlapbach, Christoph; Elco, Christopher P; Huang, Victor; Matos, Tiago R; Kupper, Thomas S; Clark, Rachael A | Science translational medicine. | 2015 Mar 18; | 279ra39 | 25787765 |
| Chronic intermittent ethanol exposure and withdrawal leads to adaptations in nucleus accumbens core postsynaptic density proteome and dendritic spines. | Uys, Joachim D; McGuier, Natalie S; Gass, Justin T; Griffin 3rd, William C; Ball, Lauren E; Mulholland, Patrick J | Addiction biology. | 2016 May; | 25787124 | |
| Nematode signaling molecules derived from multimodular assembly of primary metabolic building blocks. | Yim, Joshua J; Bose, Neelanjan; Meyer, Jan M; Sommer, Ralf J; Schroeder, Frank C | Organic letters. | 2015 Apr 3; | 1648-51 | 25782998 |
| Pathogenic mechanism of an autism-associated neuroligin mutation involves altered AMPA-receptor trafficking. | Chanda, S; Aoto, J; Lee, S-J; Wernig, M; Südhof, T C | Molecular psychiatry. | 2016 Feb; | 25778475 | |
| Suppression of RIP3-dependent necroptosis by human cytomegalovirus. | Omoto, Shinya; Guo, Hongyan; Talekar, Ganesh R; Roback, Linda; Kaiser, William J; Mocarski, Edward S | The Journal of biological chemistry. | 2015 May 1; | 11635-48 | 25778401 |
| Fluoxetine prevents respiratory arrest without enhancing ventilation in DBA/1 mice. | Zeng, Chang; Long, Xiaoyan; Cotten, Joseph F; Forman, Stuart A; Solt, Ken; Faingold, Carl L; Feng, Hua-Jun | Epilepsy & behavior : E&B. | 2015 Apr; | 25771493 | |
| Hepatitis C virus RNA functionally sequesters miR-122. | Luna, Joseph M; Scheel, Troels K H; Danino, Tal; Shaw, Katharina S; Mele, Aldo; Fak, John J; Nishiuchi, Eiko; Takacs, Constantin N; Catanese, Maria Teresa; de Jong, Ype P; Jacobson, Ira M; Rice, Charles M; Darnell, Robert B | Cell. | 2015 Mar 12; | 1099-110 | 25768906 |
| Noninvasive photoacoustic microscopy of methemoglobin in vivo. | Tang, Min; Zhou, Yong; Zhang, Ruiying; Wang, Lihong V | Journal of biomedical optics. | 2015 Mar; | 36007 | 25760655 |
| Washing stored red blood cells in an albumin solution improves their morphologic and hemorheologic properties. | Reinhart, Walter H; Piety, Nathaniel Z; Deuel, Jeremy W; Makhro, Asya; Schulzki, Thomas; Bogdanov, Nikolay; Goede, Jeroen S; Bogdanova, Anna; Abidi, Rajaa; Shevkoplyas, Sergey S | Transfusion. | 2015 Aug; | 1872-81 | 25752902 |
| Imaging Chronic Tuberculous Lesions Using Sodium [(18)F]Fluoride Positron Emission Tomography in Mice. | Ordonez, Alvaro A; DeMarco, Vincent P; Klunk, Mariah H; Pokkali, Supriya; Jain, Sanjay K | Molecular imaging and biology : MIB : the official publication of the Academy of Molecular Imaging. | 2015 Oct; | 609-14 | 25750032 |
| Genome-wide CRISPR screen in a mouse model of tumor growth and metastasis. | Chen, Sidi; Sanjana, Neville E; Zheng, Kaijie; Shalem, Ophir; Lee, Kyungheon; Shi, Xi; Scott, David A; Song, Jun; Pan, Jen Q; Weissleder, Ralph; Lee, Hakho; Zhang, Feng; Sharp, Phillip A | Cell. | 2015 Mar 12; | 1246-60 | 25748654 |
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| Enhanced reduced representation bisulfite sequencing for assessment of DNA methylation at base pair resolution. | Garrett-Bakelman, Francine E; Sheridan, Caroline K; Kacmarczyk, Thadeous J; Ishii, Jennifer; Betel, Doron; Alonso, Alicia; Mason, Christopher E; Figueroa, Maria E; Melnick, Ari M | Journal of visualized experiments : JoVE. | 2015; | e52246 | 25742437 |
| The human toxome project. | Bouhifd, Mounir; Andersen, Melvin E; Baghdikian, Christina; Boekelheide, Kim; Crofton, Kevin M; Fornace Jr, Albert J; Kleensang, Andre; Li, Henghong; Livi, Carolina; Maertens, Alexandra; McMullen, Patrick D; Rosenberg, Michael; Thomas, Russell; Vantangoli, Marguerite; Yager, James D; Zhao, Liang; Hartung, Thomas | ALTEX. | 2015; | 112-24 | 25742299 |
| Development of a toxicogenomics signature for genotoxicity using a dose-optimization and informatics strategy in human cells. | Li, Heng-Hong; Hyduke, Daniel R; Chen, Renxiang; Heard, Pamela; Yauk, Carole L; Aubrecht, Jiri; Fornace Jr, Albert J | Environmental and molecular mutagenesis. | 2015 Jul; | 505-19 | 25733355 |
| Integration of metabolic activation with a predictive toxicogenomics signature to classify genotoxic versus nongenotoxic chemicals in human TK6 cells. | Buick, Julie K; Moffat, Ivy; Williams, Andrew; Swartz, Carol D; Recio, Leslie; Hyduke, Daniel R; Li, Heng-Hong; Fornace Jr, Albert J; Aubrecht, Jiri; Yauk, Carole L | Environmental and molecular mutagenesis. | 2015 Jul; | 520-34 | 25733247 |
| Sponge-mediated lentivirus delivery to acute and chronic spinal cord injuries. | Thomas, Aline M; Palma, Jaime L; Shea, Lonnie D | Journal of controlled release : official journal of the Controlled Release Society. | 2015 Apr 28; | 10-Jan | 25724274 |
| The ferrous iron-responsive BqsRS two-component system activates genes that promote cationic stress tolerance. | Kreamer, Naomi N; Costa, Flavia; Newman, Dianne K | mBio. | 2015; | e02549 | 25714721 |
| Hypoxic preconditioning of mesenchymal stromal cells induces metabolic changes, enhances survival, and promotes cell retention in vivo. | Beegle, Julie; Lakatos, Kinga; Kalomoiris, Stefanos; Stewart, Heather; Isseroff, R Rivkah; Nolta, Jan A; Fierro, Fernando A | Stem cells (Dayton, Ohio). | 2015 Jun; | 1818-28 | 25702874 |
| Tripling the detection view of high-frequency linear-array-based photoacoustic computed tomography by using two planar acoustic reflectors. | Li, Guo; Xia, Jun; Wang, Kun; Maslov, Konstantin; Anastasio, Mark A; Wang, Lihong V | Quantitative imaging in medicine and surgery. | 2015 Feb; | 57-62 | 25694954 |
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| A rapid paper-based test for quantifying sickle hemoglobin in blood samples from patients with sickle cell disease. | Piety, Nathaniel Z; Yang, Xiaoxi; Lezzar, Dalia; George, Alex; Shevkoplyas, Sergey S | American journal of hematology. | 2015 Jun; | 478-82 | 25689370 |
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| Handheld photoacoustic probe to detect both melanoma depth and volume at high speed in vivo. | Zhou, Yong; Li, Guo; Zhu, Liren; Li, Chiye; Cornelius, Lynn A; Wang, Lihong V | Journal of biophotonics. | 2015 Feb 9; | 25676898 | |
| Herpes simplex virus suppresses necroptosis in human cells. | Guo, Hongyan; Omoto, Shinya; Harris, Philip A; Finger, Joshua N; Bertin, John; Gough, Peter J; Kaiser, William J; Mocarski, Edward S | Cell host & microbe. | 2015 Feb 11; | 243-51 | 25674983 |
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| Targeting the tumor vasculature to enhance T cell activity. | Lanitis, Evripidis; Irving, Melita; Coukos, George | Current opinion in immunology. | 2015 Apr; | 55-63 | 25665467 |
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| WNT7A and PAX6 define corneal epithelium homeostasis and pathogenesis. | Ouyang, Hong; Xue, Yuanchao; Lin, Ying; Zhang, Xiaohui; Xi, Lei; Patel, Sherrina; Cai, Huimin; Luo, Jing; Zhang, Meixia; Zhang, Ming; Yang, Yang; Li, Gen; Li, Hairi; Jiang, Wei; Yeh, Emily; Lin, Jonathan; Pei, Michelle; Zhu, Jin; Cao, Guiqun; Zhang, Liang | Nature | 2014 Jul 17 | 358-61 | 25030175 |
| Arginase I levels are decreased in the plasma of pediatric patients with atopic dermatitis. | Dimitriades, Victoria; Rodriguez, Paulo C; Zabaleta, Jovanny; Ochoa, Augusto C | Annals of allergy, asthma & immunology : official publication of the American College of Allergy, Asthma, & Immunology | 2014 Jul 11 | NULL | 25027824 |
| Heparin-chitosan nanoparticle functionalization of porous poly(ethylene glycol) hydrogels for localized lentivirus delivery of angiogenic factors. | Thomas, Aline M; Gomez, Andrew J; Palma, Jaime L; Yap, Woon Teck; Shea, Lonnie D | Biomaterials | 2014 Oct | 8687-93 | 25023395 |
| Imaging ATUM ultrathin section libraries with WaferMapper: a multi-scale approach to EM reconstruction of neural circuits. | Hayworth, Kenneth J; Morgan, Josh L; Schalek, Richard; Berger, Daniel R; Hildebrand, David G C; Lichtman, Jeff W | Frontiers in neural circuits | 2014 | 68 | 25018701 |
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| PEDSnet: how a prototype pediatric learning health system is being expanded into a national network. | Forrest, Christopher B; Margolis, Peter; Seid, Michael; Colletti, Richard B | Health affairs (Project Hope) | 2014 Jul | 1171-7 | 25006143 |
| Alive and well? Exploring disease by studying lifespan. | Brett, Jamie O; Rando, Thomas A | Current opinion in genetics & development | 2014 Jul 5 | 33-40 | 25005743 |
| Mobile DNA elements in the generation of diversity and complexity in the brain. | Erwin, Jennifer A; Marchetto, Maria C; Gage, Fred H | Nature reviews. Neuroscience | 2014 Aug | 497-506 | 25005482 |
| Unrest at home: diarrheal disease and microbiota disturbance. | Bik, Elisabeth M; Relman, David A | Genome biology | 2014 | 120 | 25002208 |
| Low incidence of off-target mutations in individual CRISPR-Cas9 and TALEN targeted human stem cell clones detected by whole-genome sequencing. | Veres, Adrian; Gosis, Bridget S; Ding, Qiurong; Collins, Ryan; Ragavendran, Ashok; Brand, Harrison; Erdin, Serkan; Talkowski, Michael E; Musunuru, Kiran | Cell stem cell | 2014 Jul 3 | 27-30 | 24996167 |
| A freely-moving monkey treadmill model. | D Foster, Justin; Nuyujukian, Paul; Freifeld, Oren; Gao, Hua; Walker, Ross; I Ryu, Stephen; H Meng, Teresa; Murmann, Boris; J Black, Michael; V Shenoy, Krishna | Journal of neural engineering | 2014 Aug | 46020 | 24995476 |
| Expression of arginase I in myeloid cells limits control of residual disease after radiation therapy of tumors in mice. | Crittenden, Marka R; Savage, Talicia; Cottam, Benjamin; Baird, Jason; Rodriguez, Paulo C; Newell, Pippa; Young, Kristina; Jackson, Andrew M; Gough, Michael J | Radiation research | 2014 Aug | 182-90 | 24992164 |
| The More Exotic Shapes of Semiconductor Nanocrystals: Emerging Applications in Bioimaging. | Lim, Sung Jun; Smith, Andrew; Nie, Shuming | Current opinion in chemical engineering | 2014 May 1 | 137-143 | 24982823 |
| Continuous scanning of a time-reversed ultrasonically encoded optical focus by reflection-mode digital phase conjugation. | Suzuki, Yuta; Tay, Jian Wei; Yang, Qiang; Wang, Lihong V | Optics letters | 2014 Jun 15 | 3441-4 | 24978506 |
| FLIC: high-throughput, continuous analysis of feeding behaviors in Drosophila. | Ro, Jennifer; Harvanek, Zachary M; Pletcher, Scott D | PloS one | 2014 | e101107 | 24978054 |
| Studying apoptosis in the Zebrafish. | Eimon, Peter M | Methods in enzymology | 2014 | 395-431 | 24974299 |
| Photoreactive stapled peptides to identify and characterize BCL-2 family interaction sites by mass spectrometry. | Lee, Susan; Braun, Craig R; Bird, Gregory H; Walensky, Loren D | Methods in enzymology | 2014 | 25-48 | 24974285 |
| Regulation of gene expression in autoimmune disease loci and the genetic basis of proliferation in CD4+ effector memory T cells. | Hu, Xinli; Kim, Hyun; Raj, Towfique; Brennan, Patrick J; Trynka, Gosia; Teslovich, Nikola; Slowikowski, Kamil; Chen, Wei-Min; Onengut, Suna; Baecher-Allan, Clare; De Jager, Philip L; Rich, Stephen S; Stranger, Barbara E; Brenner, Michael B; Raychaudhuri, | PLoS genetics | 2014 Jun | e1004404 | 24968232 |
| Design and Analysis for Studying microRNAs in Human Disease: A Primer on -Omic Technologies. | Nair, Viswam S; Pritchard, Colin C; Tewari, Muneesh; Ioannidis, John P A | American journal of epidemiology | 2014 Jul 15 | 140-52 | 24966218 |
| Sirtuin inhibitors as anticancer agents. | Hu, Jing; Jing, Hui; Lin, Hening | Future medicinal chemistry | 2014 May | 945-66 | 24962284 |
| Optical-Resolution Photoacoustic Microscopy for Volumetric and Spectral Analysis of Histological and Immunochemical Samples. | Zhang, Yu Shrike; Yao, Junjie; Zhang, Chi; Li, Lei; Wang, Lihong V; Xia, Younan | Angewandte Chemie (International ed. in English) | 2014 Jun 24 | NULL | 24961608 |
| Imaging the intracellular distribution of tyrosine kinase inhibitors in living cells with quantitative hyperspectral stimulated Raman scattering. | Fu, Dan; Zhou, Jing; Zhu, Wenjing Suzanne; Manley, Paul W; Wang, Y Karen; Hood, Tami; Wylie, Andrew; Xie, X Sunney | Nature chemistry | 2014 Jul | 614-22 | 24950332 |
| Deletion of Ptp4a3 reduces clonogenicity and tumor-initiation ability of colitis-associated cancer cells in mice. | Cramer, Julie M; Zimmerman, Mark W; Thompson, Tim; Homanics, Gregg E; Lazo, John S; Lagasse, Eric | Stem cell research | 2014 May 27 | 164-171 | 24950307 |
| Natural neural projection dynamics underlying social behavior. | Gunaydin, Lisa A; Grosenick, Logan; Finkelstein, Joel C; Kauvar, Isaac V; Fenno, Lief E; Adhikari, Avishek; Lammel, Stephan; Mirzabekov, Julie J; Airan, Raag D; Zalocusky, Kelly A; Tye, Kay M; Anikeeva, Polina; Malenka, Robert C; Deisseroth, Karl | Cell | 2014 Jun 19 | 1535-51 | 24949967 |
| Emerging targets in neuroinflammation-driven chronic pain. | Ji, Ru-Rong; Xu, Zhen-Zhong; Gao, Yong-Jing | Nature reviews. Drug discovery | 2014 Jul | 533-48 | 24948120 |
| Chem-seq permits identification of genomic targets of drugs against androgen receptor regulation selected by functional phenotypic screens. | Jin, Chunyu; Yang, Liuqing; Xie, Min; Lin, Chunru; Merkurjev, Daria; Yang, Joy C; Tanasa, Bogdan; Oh, Soohwan; Zhang, Jie; Ohgi, Kenneth A; Zhou, Hongyan; Li, Wenbo; Evans, Christopher P; Ding, Sheng; Rosenfeld, Michael G | Proceedings of the National Academy of Sciences of the United States of America | 2014 Jun 24 | 9235-40 | 24928520 |
| Transcription. Interactions between RNA polymerase and the "core recognition element" counteract pausing. | Vvedenskaya, Irina O; Vahedian-Movahed, Hanif; Bird, Jeremy G; Knoblauch, Jared G; Goldman, Seth R; Zhang, Yu; Ebright, Richard H; Nickels, Bryce E | Science (New York, N.Y.) | 2014 Jun 13 | 1285-9 | 24926020 |
| Genetically modified T-cell therapy for osteosarcoma. | DeRenzo, Christopher; Gottschalk, Stephen | Advances in experimental medicine and biology | 2014 | 323-40 | 24924183 |
| Connexin-43 induces chemokine release from spinal cord astrocytes to maintain late-phase neuropathic pain in mice. | Chen, Gang; Park, Chul-Kyu; Xie, Rou-Gang; Berta, Temugin; Nedergaard, Maiken; Ji, Ru-Rong | Brain : a journal of neurology | 2014 Aug | 2193-209 | 24919967 |
| Dynamic pathways of -1 translational frameshifting. | Chen, Jin; Petrov, Alexey; Johansson, Magnus; Tsai, Albert; O'Leary, Sean E; Puglisi, Joseph D | Nature | 2014 Aug 21 | 328-32 | 24919156 |
| Permanent Alteration of PCSK9 With In Vivo CRISPR-Cas9 Genome Editing. | Ding, Qiurong; Strong, Alanna; Patel, Kevin M; Ng, Sze-Ling; Gosis, Bridget S; Regan, Stephanie N; Rader, Daniel J; Musunuru, Kiran | Circulation research | 2014 Jun 10 | NULL | 24916110 |
| Characterization and development of photoactivatable fluorescent proteins for single-molecule-based superresolution imaging. | Wang, Siyuan; Moffitt, Jeffrey R; Dempsey, Graham T; Xie, X Sunney; Zhuang, Xiaowei | Proceedings of the National Academy of Sciences of the United States of America | 2014 Jun 10 | 8452-7 | 24912163 |
| Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation. | Yasui, Norihisa; Findlay, Greg M; Gish, Gerald D; Hsiung, Marilyn S; Huang, Jin; Tucholska, Monika; Taylor, Lorne; Smith, Louis; Boldridge, W Clifford; Koide, Akiko; Pawson, Tony; Koide, Shohei | Molecular cell | 2014 Jun 19 | 1034-41 | 24910098 |
| Targeting cells with single vectors using multiple-feature Boolean logic. | Fenno, Lief E; Mattis, Joanna; Ramakrishnan, Charu; Hyun, Minsuk; Lee, Soo Yeun; He, Miao; Tucciarone, Jason; Selimbeyoglu, Aslihan; Berndt, Andre; Grosenick, Logan; Zalocusky, Kelly A; Bernstein, Hannah; Swanson, Haley; Perry, Chelsey; Diester, Ilka; Boy | Nature methods | 2014 Jul | 763-72 | 24908100 |
| Development and applications of CRISPR-Cas9 for genome engineering. | Hsu, Patrick D; Lander, Eric S; Zhang, Feng | Cell. | 2014 Jun 5; | 1262-78 | 24906146 |
| Enzyme inhibitor discovery by activity-based protein profiling. | Niphakis, Micah J; Cravatt, Benjamin F | Annual review of biochemistry | 2014 | 341-77 | 24905785 |
| Computational modeling helps uncover mechanisms related to the progression of emphysema. | Suki, Bela; Parameswaran, Harikrishnan | Drug discovery today. Disease models | 2014 Jul 8 | 4245-4249 | 24904681 |
| Loss of the multifunctional RNA-binding protein RBM47 as a source of selectable metastatic traits in breast cancer. | Vanharanta, Sakari; Marney, Christina B; Shu, Weiping; Valiente, Manuel; Zou, Yilong; Mele, Aldo; Darnell, Robert B; Massagué, Joan | eLife. | 2014; | 24898756 | |
| The pivotal regulatory landscape of RNA modifications. | Li, Sheng; Mason, Christopher E | Annual review of genomics and human genetics. | 2014; | 127-50 | 24898039 |
| Dual responsiveness of a tunable thermo-sensitive polypeptide. | Chopko, Caroline M; Lowden, Erika L; Engler, Amanda C; Griffith, Linda G; Hammond, Paula T | ACS macro letters | 2012 Jun 19 | 727-731 | 24883233 |
| Heparin microparticle effects on presentation and bioactivity of bone morphogenetic protein-2. | Hettiaratchi, Marian H; Miller, Tobias; Temenoff, Johnna S; Guldberg, Robert E; McDevitt, Todd C | Biomaterials | 2014 Aug | 7228-38 | 24881028 |
| The Evolutionarily Conserved Mediator Subunit MDT-15/MED15 Links Protective Innate Immune Responses and Xenobiotic Detoxification. | Pukkila-Worley, Read; Feinbaum, Rhonda L; McEwan, Deborah L; Conery, Annie L; Ausubel, Frederick M | PLoS pathogens | 2014 May | e1004143 | 24875643 |
| Transplanted terminally differentiated induced pluripotent stem cells are accepted by immune mechanisms similar to self-tolerance. | de Almeida, Patricia E; Meyer, Everett H; Kooreman, Nigel G; Diecke, Sebastian; Dey, Devaveena; Sanchez-Freire, Veronica; Hu, Shijun; Ebert, Antje; Odegaard, Justin; Mordwinkin, Nicholas M; Brouwer, Thomas P; Lo, David; Montoro, Daniel T; Longaker, Michae | Nature communications | 2014 | 3903 | 24875164 |
| Sonic hedgehog and neurotrophin-3 increase oligodendrocyte numbers and myelination after spinal cord injury. | Thomas, Aline M; Seidlits, Stephanie K; Goodman, Ashley G; Kukushliev, Todor V; Hassani, Donna M; Cummings, Brian J; Anderson, Aileen J; Shea, Lonnie D | Integrative biology : quantitative biosciences from nano to macro | 2014 Jul 24 | 694-705 | 24873988 |
| mTORC1 controls the adaptive transition of quiescent stem cells from G0 to G(Alert). | Rodgers, Joseph T; King, Katherine Y; Brett, Jamie O; Cromie, Melinda J; Charville, Gregory W; Maguire, Katie K; Brunson, Christopher; Mastey, Namrata; Liu, Ling; Tsai, Chang-Ru; Goodell, Margaret A; Rando, Thomas A | Nature | 2014 Jun 19 | 393-6 | 24870234 |
| In vivo metabolic fingerprinting of neutral lipids with hyperspectral stimulated Raman scattering microscopy. | Fu, Dan; Yu, Yong; Folick, Andrew; Currie, Erin; Farese Jr, Robert V; Tsai, Tsung-Huang; Xie, Xiaoliang Sunney; Wang, Meng C | Journal of the American Chemical Society | 2014 Jun 18 | 8820-8 | 24869754 |
| Vagus nerve controls resolution and pro-resolving mediators of inflammation. | Mirakaj, Valbona; Dalli, Jesmond; Granja, Tiago; Rosenberger, Peter; Serhan, Charles N | The Journal of experimental medicine | 2014 Jun 2 | 1037-48 | 24863066 |
| Concise review: MicroRNA function in multipotent mesenchymal stromal cells. | Clark, Elizabeth A; Kalomoiris, Stefanos; Nolta, Jan A; Fierro, Fernando A | Stem cells (Dayton, Ohio) | 2014 May | 1074-82 | 24860868 |
| Identification of the RNA recognition element of the RBPMS family of RNA-binding proteins and their transcriptome-wide mRNA targets. | Farazi, Thalia A; Leonhardt, Carl S; Mukherjee, Neelanjan; Mihailovic, Aleksandra; Li, Song; Max, Klaas E A; Meyer, Cindy; Yamaji, Masashi; Cekan, Pavol; Jacobs, Nicholas C; Gerstberger, Stefanie; Bognanni, Claudia; Larsson, Erik; Ohler, Uwe; Tuschl, Thom | RNA (New York, N.Y.) | 2014 Jul | 1090-102 | 24860013 |
| Oncogenic transformation of diverse gastrointestinal tissues in primary organoid culture. | Li, Xingnan; Nadauld, Lincoln; Ootani, Akifumi; Corney, David C; Pai, Reetesh K; Gevaert, Olivier; Cantrell, Michael A; Rack, Paul G; Neal, James T; Chan, Carol W-M; Yeung, Trevor; Gong, Xue; Yuan, Jenny; Wilhelmy, Julie; Robine, Sylvie; Attardi, Laura D; | Nature medicine | 2014 Jul | 769-77 | 24859528 |
| Oncogenic transformation of diverse gastrointestinal tissues in primary organoid culture. | Li, Xingnan; Nadauld, Lincoln; Ootani, Akifumi; Corney, David C; Pai, Reetesh K; Gevaert, Olivier; Cantrell, Michael A; Rack, Paul G; Neal, James T; Chan, Carol W-M; Yeung, Trevor; Gong, Xue; Yuan, Jenny; Wilhelmy, Julie; Robine, Sylvie; Attardi, Laura D; | Nature medicine | 2014 May 25 | NULL | 24859528 |
| A Monoclonal Antibody that Targets a NaV1.7 Channel Voltage Sensor for Pain and Itch Relief. | Lee, Jun-Ho; Park, Chul-Kyu; Chen, Gang; Han, Qingjian; Xie, Rou-Gang; Liu, Tong; Ji, Ru-Rong; Lee, Seok-Yong | Cell | 2014 Jun 5 | 1393-404 | 24856969 |
| The Lipid Kinase PIP5K1C Regulates Pain Signaling and Sensitization. | Wright, Brittany D; Loo, Lipin; Street, Sarah E; Ma, Anqi; Taylor-Blake, Bonnie; Stashko, Michael A; Jin, Jian; Janzen, William P; Frye, Stephen V; Zylka, Mark J | Neuron | 2014 May 21 | 836-47 | 24853942 |
| Helminth colonization is associated with increased diversity of the gut microbiota. | Lee, Soo Ching; Tang, Mei San; Lim, Yvonne A L; Choy, Seow Huey; Kurtz, Zachary D; Cox, Laura M; Gundra, Uma Mahesh; Cho, Ilseung; Bonneau, Richard; Blaser, Martin J; Chua, Kek Heng; Loke, P'ng | PLoS neglected tropical diseases. | 2014 May; | e2880 | 24851867 |
| Positive and negative gustatory inputs affect Drosophila lifespan partly in parallel to dFOXO signaling. | Ostojic, Ivan; Boll, Werner; Waterson, Michael J; Chan, Tammy; Chandra, Rashmi; Pletcher, Scott D; Alcedo, Joy | Proceedings of the National Academy of Sciences of the United States of America | 2014 Jun 3 | 8143-8 | 24847072 |
| Materials as stem cell regulators. | Murphy, William L; McDevitt, Todd C; Engler, Adam J | Nature materials | 2014 Jun | 547-57 | 24845994 |
| Stuck in the out-group: Jennifer can't grow up, Jane's invisible, and Janet's over the hill. | Kaatz, Anna; Carnes, Molly | Journal of women's health (2002) | 2014 Jun | 481-4 | 24844292 |
| Exosomes in human semen carry a distinctive repertoire of small non-coding RNAs with potential regulatory functions. | Vojtech, Lucia; Woo, Sangsoon; Hughes, Sean; Levy, Claire; Ballweber, Lamar; Sauteraud, Renan P; Strobl, Johanna; Westerberg, Katharine; Gottardo, Raphael; Tewari, Muneesh; Hladik, Florian | Nucleic acids research | 2014 | 7290-304 | 24838567 |
| The Dynamics of SecM-Induced Translational Stalling. | Tsai, Albert; Kornberg, Guy; Johansson, Magnus; Chen, Jin; Puglisi, Joseph D | Cell reports | 2014 Jun 12 | 1521-33 | 24836001 |
| Sequence-dependent elongation dynamics on macrolide-bound ribosomes. | Johansson, Magnus; Chen, Jin; Tsai, Albert; Kornberg, Guy; Puglisi, Joseph D | Cell reports | 2014 Jun 12 | 1534-46 | 24836000 |
| Stem cells as vehicles for youthful regeneration of aged tissues. | Rando, Thomas A; Wyss-Coray, Tony | The journals of gerontology. Series A, Biological sciences and medical sciences | 2014 Jun | S39-42 | 24833585 |
| Rescue of Notch-1 Signaling in Antigen-Specific CD8+ T Cells Overcomes Tumor-Induced T-cell Suppression and Enhances Immunotherapy in Cancer. | Sierra, Rosa A; Thevenot, Paul; Raber, Patrick L; Cui, Yan; Parsons, Chris; Ochoa, Augusto C; Trillo-Tinoco, Jimena; Valle, Luis Del; Rodriguez, Paulo C | Cancer immunology research | 2014 Aug | 800-11 | 24830414 |
| Exclusion-Zone Formation From Discontinuous Nafion Surfaces. | Figueroa, Xavier A; Pollack, Gerald H | International journal of design & nature and ecodynamics : a transdisciplinary journal relating to nature, science and the humanities | 2011 Nov 30 | 286-296 | 24826197 |
| The kinase regulator mob1 acts as a patterning protein for stentor morphogenesis. | Slabodnick, Mark M; Ruby, J Graham; Dunn, Joshua G; Feldman, Jessica L; DeRisi, Joseph L; Marshall, Wallace F | PLoS biology | 2014 May | e1001861 | 24823688 |
| Cutting Edge: RIP1 Kinase Activity Is Dispensable for Normal Development but Is a Key Regulator of Inflammation in SHARPIN-Deficient Mice. | Berger, Scott B; Kasparcova, Viera; Hoffman, Sandy; Swift, Barb; Dare, Lauren; Schaeffer, Michelle; Capriotti, Carol; Cook, Michael; Finger, Joshua; Hughes-Earle, Angela; Harris, Philip A; Kaiser, William J; Mocarski, Edward S; Bertin, John; Gough, Peter | Journal of immunology (Baltimore, Md. : 1950) | 2014 May 12 | NULL | 24821972 |
| Water sensor ppk28 modulates Drosophila lifespan and physiology through AKH signaling. | Waterson, Michael J; Chung, Brian Y; Harvanek, Zachary M; Ostojic, Ivan; Alcedo, Joy; Pletcher, Scott D | Proceedings of the National Academy of Sciences of the United States of America | 2014 Jun 3 | 8137-42 | 24821805 |
| RIP1 suppresses innate immune necrotic as well as apoptotic cell death during mammalian parturition. | Kaiser, William J; Daley-Bauer, Lisa P; Thapa, Roshan J; Mandal, Pratyusha; Berger, Scott B; Huang, Chunzi; Sundararajan, Aarthi; Guo, Hongyan; Roback, Linda; Speck, Samuel H; Bertin, John; Gough, Peter J; Balachandran, Siddharth; Mocarski, Edward S | Proceedings of the National Academy of Sciences of the United States of America | 2014 May 27 | 7753-8 | 24821786 |
| Assessing Pseudomonas virulence with a nonmammalian host: Drosophila melanogaster. | Haller, Samantha; Limmer, Stefanie; Ferrandon, Dominique | Methods in molecular biology (Clifton, N.J.) | 2014 | 723-40 | 24818946 |
| Equilibrium and dynamic design principles for binding molecules engineered for reagentless biosensors. | de Picciotto, Seymour; Imperiali, Barbara; Griffith, Linda G; Wittrup, K Dane | Analytical biochemistry | 2014 Sep 1 | 15-Sep | 24814226 |
| Structurally distinct ca(2+) signaling domains of sperm flagella orchestrate tyrosine phosphorylation and motility. | Chung, Jean-Ju; Shim, Sang-Hee; Everley, Robert A; Gygi, Steven P; Zhuang, Xiaowei; Clapham, David E | Cell | 2014 May 8 | 808-22 | 24813608 |
| Assessment and improvement of Indian-origin rhesus macaque and Mauritian-origin cynomolgus macaque genome annotations using deep transcriptome sequencing data. | Peng, Xinxia; Pipes, Lenore; Xiong, Hao; Green, Richard R; Jones, Daniel C; Ruzzo, Walter L; Schroth, Gary P; Mason, Christopher E; Palermo, Robert E; Katze, Michael G | Journal of medical primatology | 2014 May 8 | NULL | 24810475 |
| Transcriptional and metabolic adaptation of human neurons to the mitochondrial toxicant MPP(+). | Krug, A K; Gutbier, S; Zhao, L; Poltl, D; Kullmann, C; Ivanova, V; Forster, S; Jagtap, S; Meiser, J; Leparc, G; Schildknecht, S; Adam, M; Hiller, K; Farhan, H; Brunner, T; Hartung, T; Sachinidis, A; Leist, M | Cell death & disease | 2014 | e1222 | 24810058 |
| Comprehensive analysis of RNA-protein interactions by high-throughput sequencing-RNA affinity profiling. | Tome, Jacob M; Ozer, Abdullah; Pagano, John M; Gheba, Dan; Schroth, Gary P; Lis, John T | Nature methods | 2014 Jun | 683-8 | 24809628 |
| Removing batch effects from histopathological images for enhanced cancer diagnosis. | Kothari, Sonal; Phan, John H; Stokes, Todd H; Osunkoya, Adeboye O; Young, Andrew N; Wang, May D | IEEE journal of biomedical and health informatics | 2014 May | 765-72 | 24808220 |
| Signal recognition particle-ribosome binding is sensitive to nascent chain length. | Noriega, Thomas R; Tsai, Albert; Elvekrog, Margaret M; Petrov, Alexey; Neher, Saskia B; Chen, Jin; Bradshaw, Niels; Puglisi, Joseph D; Walter, Peter | The Journal of biological chemistry. | 2014 Jul 11; | 19294-305 | 24808175 |
| Bio-inspired detoxification using 3D-printed hydrogel nanocomposites. | Gou, Maling; Qu, Xin; Zhu, Wei; Xiang, Mingli; Yang, Jun; Zhang, Kang; Wei, Yuquan; Chen, Shaochen | Nature communications | 2014 | 3774 | 24805923 |
| Space-time wiring specificity supports direction selectivity in the retina. | Kim, Jinseop S; Greene, Matthew J; Zlateski, Aleksandar; Lee, Kisuk; Richardson, Mark; Turaga, Srinivas C; Purcaro, Michael; Balkam, Matthew; Robinson, Amy; Behabadi, Bardia F; Campos, Michael; Denk, Winfried; Seung, H Sebastian; EyeWirers | Nature | 2014 May 15 | 331-6 | 24805243 |
| A new class of protein cancer biomarker candidates: Differentially expressed splice variants of ERBB2 (HER2/neu) and ERBB1 (EGFR) in breast cancer cell lines. | Omenn, Gilbert S; Guan, Yuanfang; Menon, Rajasree | Journal of proteomics | 2014 May 5 | NULL | 24802673 |
| Caspase-8 and RIP kinases regulate bacteria-induced innate immune responses and cell death. | Weng, Dan; Marty-Roix, Robyn; Ganesan, Sandhya; Proulx, Megan K; Vladimer, Gregory I; Kaiser, William J; Mocarski, Edward S; Pouliot, Kimberly; Chan, Francis Ka-Ming; Kelliher, Michelle A; Harris, Phillip A; Bertin, John; Gough, Peter J; Shayakhmetov, Dmitry M; Goguen, Jon D; Fitzgerald, Katherine A; Silverman, Neal; Lien, Egil | Proceedings of the National Academy of Sciences of the United States of America. | 2014 May 20; | 7391-6 | 24799678 |
| T-cell and NK-cell infiltration into solid tumors: a key limiting factor for efficacious cancer immunotherapy. | Melero, Ignacio; Rouzaut, Ana; Motz, Greg T; Coukos, George | Cancer discovery | 2014 May | 522-6 | 24795012 |
| Tumor endothelium FasL establishes a selective immune barrier promoting tolerance in tumors. | Motz, Gregory T; Santoro, Stephen P; Wang, Li-Ping; Garrabrant, Tom; Lastra, Ricardo R; Hagemann, Ian S; Lal, Priti; Feldman, Michael D; Benencia, Fabian; Coukos, George | Nature medicine | 2014 May 4 | NULL | 24793239 |
| Approaches to in vitro tissue regeneration with application for human disease modeling and drug development. | Ebrahimkhani, Mohammad R; Young, Carissa L; Lauffenburger, Douglas A; Griffith, Linda G; Borenstein, Jeffrey T | Drug discovery today | 2014 Jun | 754-62 | 24793141 |
| Shikonin-loaded antibody-armed nanoparticles for targeted therapy of ovarian cancer. | Matthaiou, Efthymia-Iliana; Barar, Jaleh; Sandaltzopoulos, Raphael; Li, Chunsheng; Coukos, George; Omidi, Yadollah | International journal of nanomedicine | 2014 | 1855-70 | 24790428 |
| Molecular-level functional magnetic resonance imaging of dopaminergic signaling. | Lee, Taekwan; Cai, Lili X; Lelyveld, Victor S; Hai, Aviad; Jasanoff, Alan | Science (New York, N.Y.) | 2014 May 2 | 533-5 | 24786083 |
| Small-molecule axon-polarization studies enabled by a shear-free microfluidic gradient generator. | Xu, Hui; Ferreira, Meghaan M; Heilshorn, Sarah C | Lab on a chip | 2014 Jun 21 | 2047-56 | 24781157 |
| Induced neuronal reprogramming. | Ang, Cheen Euong; Wernig, Marius | The Journal of comparative neurology | 2014 Apr 27 | NULL | 24771471 |
| Alemtuzumab Therapy for Leukemic Cutaneous T-Cell Lymphoma: Diffuse Erythema as a Positive Predictor of Complete Remission. | Watanabe, Rei; Teague, Jessica E; Fisher, David C; Kupper, Thomas S; Clark, Rachael A | JAMA dermatology | 2014 Apr 23 | NULL | 24760312 |
| Crosstalk between adrenergic and toll-like receptors in human mesenchymal stem cells and keratinocytes: a recipe for impaired wound healing. | Dasu, Mohan R; Ramirez, Sandra R; La, Thi Dinh; Gorouhi, Farzam; Nguyen, Chuong; Lin, Benjamin R; Mashburn, Chelcy; Stewart, Heather; Peavy, Thomas R; Nolta, Jan A; Isseroff, Roslyn R | Stem cells translational medicine | 2014 Jun | 745-59 | 24760207 |
| Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells. | Wu, Xuebing; Scott, David A; Kriz, Andrea J; Chiu, Anthony C; Hsu, Patrick D; Dadon, Daniel B; Cheng, Albert W; Trevino, Alexandro E; Konermann, Silvana; Chen, Sidi; Jaenisch, Rudolf; Zhang, Feng; Sharp, Phillip A | Nature biotechnology. | 2014 Jul; | 670-6 | 24752079 |
| The P7C3 class of neuroprotective compounds exerts antidepressant efficacy in mice by increasing hippocampal neurogenesis. | Walker, A K; Rivera, P D; Wang, Q; Chuang, J-C; Tran, S; Osborne-Lawrence, S; Estill, S J; Starwalt, R; Huntington, P; Morlock, L; Naidoo, J; Williams, N S; Ready, J M; Eisch, A J; Pieper, A A; Zigman, J M | Molecular psychiatry | 2014 Apr 22 | NULL | 24751964 |
| Robust, Quantitative Analysis of Proteins using Peptide Immunoreagents, in Vitro Translation, and an Ultrasensitive Acoustic Resonant Sensor. | Jalali-Yazdi, Farzad; Corbin, Jasmine M; Takahashi, Terry T; Roberts, Richard W | Analytical chemistry | 2014 May 20 | 4715-22 | 24749546 |
| Spontaneous cardiomyocyte differentiation of mouse embryoid bodies regulated by hydrogel crosslink density. | Chung, Cindy; Pruitt, Beth L; Heilshorn, Sarah C | Biomaterials science | 2013 Oct 1 | 1082-1090 | 24748962 |
| Tidal stretches differently regulate the contractile and cytoskeletal elements in intact airways. | Bartolak-Suki, Erzsebet; LaPrad, Adam S; Harvey, Brian C; Suki, Bela; Lutchen, Kenneth R | PloS one | 2014 | e94828 | 24740101 |
| One-pot Synthesis of Elastin-like Polypeptide Hydrogels with Grafted VEGF-Mimetic Peptides. | Cai, Lei; Dinh, Cong B; Heilshorn, Sarah C | Biomaterials science | 2014 May 1 | 757-765 | 24729868 |
| 3D - a new dimension of in vitro research. | Hartung, Thomas | Advanced drug delivery reviews. | 2014 Apr; | vi | 24721291 |
| Defective Tibetan PHD2 Binding to p23 Links High Altitude Adaption to Altered Oxygen Sensing. | Song, Daisheng; Li, Lin-Sheng; Arsenault, Patrick R; Tan, Qiulin; Bigham, Abigail W; Heaton-Johnson, Katherine J; Master, Stephen R; Lee, Frank S | The Journal of biological chemistry | 2014 May 23 | 14656-65 | 24711448 |
| Extracellular MicroRNAs Activate Nociceptor Neurons to Elicit Pain via TLR7 and TRPA1. | Park, Chul-Kyu; Xu, Zhen-Zhong; Berta, Temugin; Han, Qingjian; Chen, Gang; Liu, Xing-Jun; Ji, Ru-Rong | Neuron | 2014 Apr 2 | 47-54 | 24698267 |
| Discovery of a neuroprotective chemical, (S)-N-(3-(3,6-dibromo-9H-carbazol-9-yl)-2-fluoropropyl)-6-methoxypyridin-2-amine [(-)-P7C3-S243], with improved druglike properties. | Naidoo, Jacinth; De Jesus-Cortes, Hector; Huntington, Paula; Estill, Sandi; Morlock, Lorraine K; Starwalt, Ruth; Mangano, Thomas J; Williams, Noelle S; Pieper, Andrew A; Ready, Joseph M | Journal of medicinal chemistry | 2014 May 8 | 3746-54 | 24697290 |
| Identification and signature profiles for pro-resolving and inflammatory lipid mediators in human tissue. | Colas, Romain A; Shinohara, Masakazu; Dalli, Jesmond; Chiang, Nan; Serhan, Charles N | American journal of physiology. Cell physiology | 2014 Jul 1 | C39-54 | 24696140 |
| Developmental neurotoxicity - challenges in the 21st century and in vitro opportunities. | Smirnova, Lena; Hogberg, Helena T; Leist, Marcel; Hartung, Thomas | ALTEX | 2014 | 129-56 | 24687333 |
| Lassomycin, a Ribosomally Synthesized Cyclic Peptide, Kills Mycobacterium tuberculosis by Targeting the ATP-Dependent Protease ClpC1P1P2. | Gavrish, Ekaterina; Sit, Clarissa S; Cao, Shugeng; Kandror, Olga; Spoering, Amy; Peoples, Aaron; Ling, Losee; Fetterman, Ashley; Hughes, Dallas; Bissell, Anthony; Torrey, Heather; Akopian, Tatos; Mueller, Andreas; Epstein, Slava; Goldberg, Alfred; Clardy, | Chemistry & biology | 2014 Apr 24 | 509-18 | 24684906 |
| Label-free in vivo imaging of myelinated axons in health and disease with spectral confocal reflectance microscopy. | Schain, Aaron J; Hill, Robert A; Grutzendler, Jaime | Nature medicine | 2014 Apr | 443-9 | 24681598 |
| Discovering aptamers by cell-SELEX against human soluble growth factors ectopically expressed on yeast cell surface. | Meng, Hsien-Wei; Pagano, John M; White, Brian S; Toyoda, Yoshiko; Min, Irene M; Craighead, Harold G; Shalloway, David; Lis, John T; Xiao, Kai; Jin, Moonsoo M | PloS one | 2014 | e93052 | 24675636 |
| Enhancer RNAs and regulated transcriptional programs. | Lam, Michael T Y; Li, Wenbo; Rosenfeld, Michael G; Glass, Christopher K | Trends in biochemical sciences. | 2014 Apr; | 170-82 | 24674738 |
| Engineering Liver. | Griffith, Linda G; Wells, Alan; Stolz, Donna Beer | Hepatology (Baltimore, Md.) | 2014 Mar 26 | NULL | 24668880 |
| CAR T cells for solid tumors: armed and ready to go? | Kakarla, Sunitha; Gottschalk, Stephen | Cancer journal (Sudbury, Mass.) | 2014 Mar-Apr | 151-5 | 24667962 |
| Development of a membrane-anchored chemerin receptor agonist as a novel modulator of allergic airway inflammation and neuropathic pain. | Doyle, Jamie R; Krishnaji, Subrahmanian T; Zhu, Guangli; Xu, Zhen-Zhong; Heller, Daniel; Ji, Ru-Rong; Levy, Bruce D; Kumar, Krishna; Kopin, Alan S | The Journal of biological chemistry | 2014 May 9 | 13385-96 | 24659779 |
| Intention estimation in brain-machine interfaces. | Fan, Joline M; Nuyujukian, Paul; Kao, Jonathan C; Chestek, Cynthia A; Ryu, Stephen I; Shenoy, Krishna V | Journal of neural engineering | 2014 Feb | 16004 | 24654266 |
| High-Throughput Screening for Novel Anti-Infectives Using a C. elegans Pathogenesis Model. | Conery, Annie L; Larkins-Ford, Jonah; Ausubel, Frederick M; Kirienko, Natalia V | Current protocols in chemical biology | 2014 | 25-37 | 24652621 |
| Epithelial basal cells are distinct from dendritic cells and macrophages in the mouse epididymis. | Shum, Winnie W; Smith, Tegan B; Cortez-Retamozo, Virna; Grigoryeva, Lubov S; Roy, Jeremy W; Hill, Eric; Pittet, Mikael J; Breton, Sylvie; Da Silva, Nicolas | Biology of reproduction | 2014 May | 90 | 24648397 |
| Particle Display: A Quantitative Screening Method for Generating High-Affinity Aptamers. | Wang, Jinpeng; Gong, Qiang; Maheshwari, Nupur; Eisenstein, Michael; Arcila, Mary Luz; Kosik, Kenneth S; Soh, H Tom | Angewandte Chemie (International ed. in English) | 2014 Mar 18 | NULL | 24644057 |
| Development and function of human innate immune cells in a humanized mouse model. | Rongvaux, Anthony; Willinger, Tim; Martinek, Jan; Strowig, Till; Gearty, Sofia V; Teichmann, Lino L; Saito, Yasuyuki; Marches, Florentina; Halene, Stephanie; Palucka, A Karolina; Manz, Markus G; Flavell, Richard A | Nature biotechnology | 2014 Apr | 364-72 | 24633240 |
| Identification of novel CELSR1 mutations in spina bifida. | Lei, Yunping; Zhu, Huiping; Yang, Wei; Ross, M Elizabeth; Shaw, Gary M; Finnell, Richard H | PloS one | 2014 | e92207 | 24632739 |
| A population of Langerin-positive dendritic cells in murine Peyer's patches involved in sampling *-glucan microparticles. | De Jesus, Magdia; Ostroff, Gary R; Levitz, Stuart M; Bartling, Toni R; Mantis, Nicholas J | PloS one | 2014 | e91002 | 24632738 |
| Protective immunity to H7N9 influenza viruses elicited by synthetic DNA vaccine. | Yan, Jian; Villarreal, Daniel O; Racine, Trina; Chu, Jaemi S; Walters, Jewell N; Morrow, Matthew P; Khan, Amir S; Sardesai, Niranjan Y; Kim, J Joseph; Kobinger, Gary P; Weiner, David B | Vaccine | 2014 May 19 | 2833-42 | 24631084 |
| Polyhedra self-assembled from DNA tripods and characterized with 3D DNA-PAINT. | Iinuma, Ryosuke; Ke, Yonggang; Jungmann, Ralf; Schlichthaerle, Thomas; Woehrstein, Johannes B; Yin, Peng | Science (New York, N.Y.) | 2014 Apr 4 | 65-9 | 24625926 |
| HITS-CLIP and integrative modeling define the Rbfox splicing-regulatory network linked to brain development and autism. | Weyn-Vanhentenryck, Sebastien M; Mele, Aldo; Yan, Qinghong; Sun, Shuying; Farny, Natalie; Zhang, Zuo; Xue, Chenghai; Herre, Margaret; Silver, Pamela A; Zhang, Michael Q; Krainer, Adrian R; Darnell, Robert B; Zhang, Chaolin | Cell reports | 2014 Mar 27 | 1139-52 | 24613350 |
| Phenazine redox cycling enhances anaerobic survival in Pseudomonas aeruginosa by facilitating generation of ATP and a proton-motive force. | Glasser, Nathaniel R; Kern, Suzanne E; Newman, Dianne K | Molecular microbiology | 2014 Apr | 399-412 | 24612454 |
| Hepatic nonparenchymal cells drive metastatic breast cancer outgrowth and partial epithelial to mesenchymal transition. | Taylor, Donald P; Clark, Amanda; Wheeler, Sarah; Wells, Alan | Breast cancer research and treatment | 2014 Apr | 551-60 | 24610032 |
| Overexpression of diacylglycerol kinase ýý enhances G*q-coupled G protein-coupled receptor signaling. | Rittiner, Joseph E; Brings, Victoria E; Zylka, Mark J | Molecular pharmacology | 2014 May | 800-10 | 24608858 |
| Bioreactor technologies to support liver function in vitro. | Ebrahimkhani, Mohammad R; Neiman, Jaclyn A Shepard; Raredon, Micha Sam B; Hughes, David J; Griffith, Linda G | Advanced drug delivery reviews | 2014 Apr | 132-57 | 24607703 |
| Development and evaluation of SYBR Green-I based quantitative PCR assays for herpes simplex virus type 1 whole transcriptome analysis. | Garvey, Cathryn E; McGowin, Chris L; Foster, Timothy P | Journal of virological methods | 2014 Jun | 101-11 | 24607486 |
| Dependence of optical scattering from Intralipid in gelatin-gel based tissue-mimicking phantoms on mixing temperature and time. | Lai, Puxiang; Xu, Xiao; Wang, Lihong V | Journal of biomedical optics | 2014 Mar | 35002 | 24604534 |
| Common genetic variants modulate pathogen-sensing responses in human dendritic cells. | Lee, Mark N; Ye, Chun; Villani, Alexandra-Chloe; Raj, Towfique; Li, Weibo; Eisenhaure, Thomas M; Imboywa, Selina H; Chipendo, Portia I; Ran, F Ann; Slowikowski, Kamil; Ward, Lucas D; Raddassi, Khadir; McCabe, Cristin; Lee, Michelle H; Frohlich, Irene Y; H | Science (New York, N.Y.) | 2014 Mar 7 | 1246980 | 24604203 |
| Angiophagy prevents early embolus washout but recanalizes microvessels through embolus extravasation. | Grutzendler, Jaime; Murikinati, Sasidhar; Hiner, Bennett; Ji, Lingling; Lam, Carson K; Yoo, Taehwan; Gupta, Shobhana; Hafler, Brian P; Adelman, Ron A; Yuan, Peng; Rodriguez, Guadalupe | Science translational medicine | 2014 Mar 5 | 226ra31 | 24598589 |
| Systematic design and functional analysis of artificial microRNAs. | Arroyo, Jason D; Gallichotte, Emily N; Tewari, Muneesh | Nucleic acids research | 2014 | 6064-77 | 24598260 |
| Increasing the resolution of the adult neurogenesis picture. | Lacar, Benjamin; Parylak, Sarah L; Vadodaria, Krishna C; Sarkar, Anindita; Gage, Fred H | F1000prime reports | 2014 | 8 | 24592320 |
| Calibration-free absolute quantification of particle concentration by statistical analyses of photoacoustic signals in vivo. | Zhou, Yong; Yao, Junjie; Maslov, Konstantin I; Wang, Lihong V | Journal of biomedical optics | 2014 Mar | 37001 | 24589987 |
| Reducing the Excess Burden of Cervical Cancer Among Latinas: Translating Science into Health Promotion Initiatives. | Baezconde-Garbanati, Lourdes; Murphy, Sheila T; Moran, Meghan Bridgid; Cortessis, Victoria K | Californian journal of health promotion | 2013 | 45-57 | 24587769 |
| New role for the mitochondrial peptide humanin: protective agent against chemotherapy-induced side effects. | Cohen, Pinchas | Journal of the National Cancer Institute | 2014 Mar | dju006 | 24586106 |
| Mutant Huntingtin promotes autonomous microglia activation via myeloid lineage-determining factors. | Crotti, Andrea; Benner, Christopher; Kerman, Bilal E; Gosselin, David; Lagier-Tourenne, Clotilde; Zuccato, Chiara; Cattaneo, Elena; Gage, Fred H; Cleveland, Don W; Glass, Christopher K | Nature neuroscience | 2014 Apr | 513-21 | 24584051 |
| Algorithms for the analysis of ensemble neural spiking activity using simultaneous-event multivariate point-process models. | Ba, Demba; Temereanca, Simona; Brown, Emery N | Frontiers in computational neuroscience. | 2014; | 6 | 24575001 |
| Fluctuation-based imaging of nuclear Rac1 activation by protein oligomerisation. | Hinde, Elizabeth; Yokomori, Kyoko; Gaus, Katharina; Hahn, Klaus M; Gratton, Enrico | Scientific reports | 2014 | 4219 | 24573109 |
| Magnetic nanosensors optimized for rapid and reversible self-assembly. | Rodriguez, Elisenda; Lelyveld, Victor S; Atanasijevic, Tatjana; Okada, Satoshi; Jasanoff, Alan | Chemical communications (Cambridge, England) | 2014 Apr 7 | 3595-8 | 24566735 |
| RNA-guided genome editing of mammalian cells. | Pyzocha, Neena K; Ran, F Ann; Hsu, Patrick D; Zhang, Feng | Methods in molecular biology (Clifton, N.J.) | 2014 | 269-77 | 24557909 |
| High-throughput binding characterization of RNA aptamer selections using a microplate-based multiplex microcolumn device. | Szeto, Kylan; Reinholt, Sarah J; Duarte, Fabiana M; Pagano, John M; Ozer, Abdullah; Yao, Li; Lis, John T; Craighead, Harold G | Analytical and bioanalytical chemistry | 2014 Apr | 2727-32 | 24553662 |
| Antibody-based tumor vascular theranostics targeting endosialin/TEM1 in a new mouse tumor vascular model. | Li, Chunsheng; Chacko, Ann-Marie; Hu, Jia; Hasegawa, Kosei; Swails, Jennifer; Grasso, Luigi; El-Deiry, Wafik S; Nicolaides, Nicholas; Muzykantov, Vladimir R; Divgi, Chaitanya R; Coukos, George | Cancer biology & therapy | 2014 Apr | 443-51 | 24553243 |
| DNA-guided DNA interference by a prokaryotic Argonaute. | Swarts, Daan C; Jore, Matthijs M; Westra, Edze R; Zhu, Yifan; Janssen, Jorijn H; Snijders, Ambrosius P; Wang, Yanli; Patel, Dinshaw J; Berenguer, José; Brouns, Stan J J; van der Oost, John | Nature. | 2014 Mar 13; | 258-61 | 24531762 |
| Extracellular caspase-6 drives murine inflammatory pain via microglial TNF-* secretion. | Berta, Temugin; Park, Chul-Kyu; Xu, Zhen-Zhong; Xie, Ruo-Gang; Liu, Tong; Lu, Ning; Liu, Yen-Chin; Ji, Ru-Rong | The Journal of clinical investigation | 2014 Mar 3 | 1173-86 | 24531553 |
| Rejuvenation of the muscle stem cell population restores strength to injured aged muscles. | Cosgrove, Benjamin D; Gilbert, Penney M; Porpiglia, Ermelinda; Mourkioti, Foteini; Lee, Steven P; Corbel, Stephane Y; Llewellyn, Michael E; Delp, Scott L; Blau, Helen M | Nature medicine. | 2014 Mar; | 255-64 | 24531378 |
| Interferon lambda alleles predict innate antiviral immune responses and hepatitis C virus permissiveness. | Sheahan, Timothy; Imanaka, Naoko; Marukian, Svetlana; Dorner, Marcus; Liu, Peng; Ploss, Alexander; Rice, Charles M | Cell host & microbe | 2014 Feb 12 | 190-202 | 24528865 |
| Development of 124I immuno-PET targeting tumor vascular TEM1/endosialin. | Chacko, Ann-Marie; Li, Chunsheng; Nayak, Madhura; Mikitsh, John L; Hu, Jia; Hou, Catherine; Grasso, Luigi; Nicolaides, Nicholas C; Muzykantov, Vladimir R; Divgi, Chaitanya R; Coukos, George | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 2014 Mar | 500-7 | 24525208 |
| Induction of retinal progenitors and neurons from mammalian Muller glia under defined conditions. | Zhao, Jack Jiagang; Ouyang, Hong; Luo, Jing; Patel, Sherrina; Xue, Yuanchao; Quach, John; Sfeir, Nicole; Zhang, Meixia; Fu, Xiangdong; Ding, Sheng; Chen, Shaochen; Zhang, Kang | The Journal of biological chemistry | 2014 Apr 25 | 11945-51 | 24523410 |
| P7C3 and an unbiased approach to drug discovery for neurodegenerative diseases. | Pieper, Andrew A; McKnight, Steven L; Ready, Joseph M | Chemical Society reviews | 2014 Feb 11 | NULL | 24514864 |
| Fast compressed sensing analysis for super-resolution imaging using L1-homotopy. | Babcock, Hazen P; Moffitt, Jeffrey R; Cao, Yunlong; Zhuang, Xiaowei | Optics express. | 2013 Nov 18; | 28583-96 | 24514370 |
| Library generation by gene shuffling. | Meyer, Adam J; Ellefson, Jared W; Ellington, Andrew D | Current protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.] | 2014 | 15.12.1-7 | 24510437 |
| Independent optical excitation of distinct neural populations. | Klapoetke, Nathan C; Murata, Yasunobu; Kim, Sung Soo; Pulver, Stefan R; Birdsey-Benson, Amanda; Cho, Yong Ku; Morimoto, Tania K; Chuong, Amy S; Carpenter, Eric J; Tian, Zhijian; Wang, Jun; Xie, Yinlong; Yan, Zhixiang; Zhang, Yong; Chow, Brian Y; Surek, Ba | Nature methods | 2014 Feb 9 | NULL | 24509633 |
| Independent optical excitation of distinct neural populations. | Klapoetke, Nathan C; Murata, Yasunobu; Kim, Sung Soo; Pulver, Stefan R; Birdsey-Benson, Amanda; Cho, Yong Ku; Morimoto, Tania K; Chuong, Amy S; Carpenter, Eric J; Tian, Zhijian; Wang, Jun; Xie, Yinlong; Yan, Zhixiang; Zhang, Yong; Chow, Brian Y; Surek, Ba | Nature methods | 2014 Mar | 338-46 | 24509633 |
| Self-recalibrating classifiers for intracortical brain-computer interfaces. | Bishop, William; Chestek, Cynthia C; Gilja, Vikash; Nuyujukian, Paul; Foster, Justin D; Ryu, Stephen I; Shenoy, Krishna V; Yu, Byron M | Journal of neural engineering | 2014 Apr | 26001 | 24503597 |
| Opioid-induced cardioprotection. | Tanaka, Katsuya; Kersten, Judy R; Riess, Matthias L | Current pharmaceutical design. | 2014; | 5696-705 | 24502571 |
| Molecular network analysis of endometriosis reveals a role for c-Jun-regulated macrophage activation. | Beste, Michael T; Pfaffle-Doyle, Nicole; Prentice, Emily A; Morris, Stephanie N; Lauffenburger, Douglas A; Isaacson, Keith B; Griffith, Linda G | Science translational medicine | 2014 Feb 5 | 222ra16 | 24500404 |
| Introduction of mismatches in a random shRNA-encoding library improves potency for phenotypic selection. | Wang, Yongping; Speier, Jacqueline S; Engram-Pearl, Jessica; Wilson, Robert B | PloS one | 2014 | e87390 | 24498319 |
| Interconnected network motifs control podocyte morphology and kidney function. | Azeloglu, Evren U; Hardy, Simon V; Eungdamrong, Narat John; Chen, Yibang; Jayaraman, Gomathi; Chuang, Peter Y; Fang, Wei; Xiong, Huabao; Neves, Susana R; Jain, Mohit R; Li, Hong; Ma'ayan, Avi; Gordon, Ronald E; He, John Cijiang; Iyengar, Ravi | Science signaling | 2014 Feb 4 | ra12 | 24497609 |
| Multiplexed 3D cellular super-resolution imaging with DNA-PAINT and Exchange-PAINT. | Jungmann, Ralf; Avendano, Maier S; Woehrstein, Johannes B; Dai, Mingjie; Shih, William M; Yin, Peng | Nature methods | 2014 Mar | 313-8 | 24487583 |
| A phosphate-binding pocket within the platform-PAZ-connector helix cassette of human Dicer. | Tian, Yuan; Simanshu, Dhirendra K; Ma, Jin-Biao; Park, Jong-Eun; Heo, Inha; Kim, V Narry; Patel, Dinshaw J | Molecular cell | 2014 Feb 20 | 606-16 | 24486018 |
| Ectopic transplantation sites for cell-based therapy. | DeWard, Aaron D; Komori, Junji; Lagasse, Eric | Current opinion in organ transplantation | 2014 Apr | 169-74 | 24480968 |
| Intramuscular therapeutic vaccination targeting HPV16 induces T cell responses that localize in mucosal lesions. | Maldonado, Leonel; Teague, Jessica E; Morrow, Matthew P; Jotova, Iveta; Wu, T C; Wang, Chenguang; Desmarais, Cindy; Boyer, Jean D; Tycko, Benjamin; Robins, Harlan S; Clark, Rachael A; Trimble, Cornelia L | Science translational medicine | 2014 Jan 29 | 221ra13 | 24477000 |
| In vivo discovery of immunotherapy targets in the tumour microenvironment. | Zhou, Penghui; Shaffer, Donald R; Alvarez Arias, Diana A; Nakazaki, Yukoh; Pos, Wouter; Torres, Alexis J; Cremasco, Viviana; Dougan, Stephanie K; Cowley, Glenn S; Elpek, Kutlu; Brogdon, Jennifer; Lamb, John; Turley, Shannon J; Ploegh, Hidde L; Root, David | Nature | 2014 Feb 6 | 52-7 | 24476824 |
| Modeling the dynamical effects of anesthesia on brain circuits. | Ching, Shinung; Brown, Emery N | Current opinion in neurobiology | 2014 Apr | 116-22 | 24457211 |
| Virus associated malignancies: the role of viral hepatitis in hepatocellular carcinoma. | Shlomai, Amir; de Jong, Ype P; Rice, Charles M | Seminars in cancer biology | 2014 Jun | 78-88 | 24457013 |
| Defining NELF-E RNA Binding in HIV-1 and Promoter-Proximal Pause Regions. | Pagano, John M; Kwak, Hojoong; Waters, Colin T; Sprouse, Rebekka O; White, Brian S; Ozer, Abdullah; Szeto, Kylan; Shalloway, David; Craighead, Harold G; Lis, John T | PLoS genetics | 2014 Jan | e1004090 | 24453987 |
| Chronic Spinal Cord Electrical Stimulation Protects Against 6-hydroxydopamine Lesions. | Yadav, Amol P; Fuentes, Romulo; Zhang, Hao; Vinholo, Thais; Wang, Chi-Han; Freire, Marco Aurelio M; Nicolelis, Miguel A L | Scientific reports | 2014 | 3839 | 24452435 |
| Enrichment of lung microbiome with supraglottic taxa is associated with increased pulmonary inflammation. | Segal, Leopoldo N; Alekseyenko, Alexander V; Clemente, Jose C; Kulkarni, Rohan; Wu, Benjamin; Gao, Zhan; Chen, Hao; Berger, Kenneth I; Goldring, Roberta M; Rom, William N; Blaser, Martin J; Weiden, Michael D | Microbiome. | 2013 Jul 01; | 24450871 | |
| Proteoglycans maintain lung stability in an elastase-treated mouse model of emphysema. | Takahashi, Ayuko; Majumdar, Arnab; Parameswaran, Harikrishnan; Bartolak-Suki, Erzsebet; Suki, Bela | American journal of respiratory cell and molecular biology | 2014 Jul | 26-33 | 24450478 |
| Forward and reverse mutagenesis in C. elegans. | Kutscher, Lena M; Shaham, Shai | WormBook : the online review of C. elegans biology | 2014 | 26-Jan | 24449699 |
| C4d deposits on the surface of RBCs in trauma patients and interferes with their function. | Muroya, Takashi; Kannan, Lakshmi; Ghiran, Ionita C; Shevkoplyas, Sergey S; Paz, Ziv; Tsokos, Maria; Dalle Lucca, Jurandir J; Shapiro, Nathan I; Tsokos, George C | Critical care medicine | 2014 May | e364-72 | 24448198 |
| Mapping the human toxome by systems toxicology. | Bouhifd, Mounir; Hogberg, Helena T; Kleensang, Andre; Maertens, Alexandra; Zhao, Liang; Hartung, Thomas | Basic & clinical pharmacology & toxicology | 2014 Jul | 24-31 | 24443875 |
| Regenerative medicine: Of fish and men. | Rando, Thomas A | Nature chemical biology | 2014 Feb | 91-2 | 24441638 |
| Pluripotent stem cell-derived hepatocyte-like cells. | Schwartz, R E; Fleming, H E; Khetani, S R; Bhatia, S N | Biotechnology advances | 2014 Mar-Apr | 504-13 | 24440487 |
| A brave new world: the lung microbiota in an era of change. | Segal, Leopoldo N; Blaser, Martin J | Annals of the American Thoracic Society | 2014 Jan | S21-7 | 24437400 |
| A transition in brain state during propofol-induced unconsciousness. | Mukamel, Eran A; Pirondini, Elvira; Babadi, Behtash; Wong, Kin Foon Kevin; Pierce, Eric T; Harrell, P Grace; Walsh, John L; Salazar-Gomez, Andres F; Cash, Sydney S; Eskandar, Emad N; Weiner, Veronica S; Brown, Emery N; Purdon, Patrick L | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2014 Jan 15; | 839-45 | 24431442 |
| Human TH9 cells are skin-tropic and have autocrine and paracrine proinflammatory capacity. | Schlapbach, Christoph; Gehad, Ahmed; Yang, Chao; Watanabe, Rei; Guenova, Emmanuella; Teague, Jessica E; Campbell, Laura; Yawalkar, Nikhil; Kupper, Thomas S; Clark, Rachael A | Science translational medicine | 2014 Jan 15 | 219ra8 | 24431112 |
| Circuit dynamics of adaptive and maladaptive behaviour. | Deisseroth, Karl | Nature | 2014 Jan 16 | 309-17 | 24429629 |
| Genetically modified T cells to target glioblastoma. | Krebs, Simone; Rodríguez-Cruz, Tania G; Derenzo, Christopher; Gottschalk, Stephen | Frontiers in oncology. | 2013 Dec 31; | 24427741 | |
| A computational model of the response of adherent cells to stretch and changes in substrate stiffness. | Parameswaran, Harikrishnan; Lutchen, Kenneth R; Suki, Bela | Journal of applied physiology (Bethesda, Md. : 1985) | 2014 Apr 1 | 825-34 | 24408996 |
| Mapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysis. | Moore, Michael J; Zhang, Chaolin; Gantman, Emily Conn; Mele, Aldo; Darnell, Jennifer C; Darnell, Robert B | Nature protocols | 2014 Feb | 263-93 | 24407355 |
| Human retinal progenitor cell transplantation preserves vision. | Luo, Jing; Baranov, Petr; Patel, Sherrina; Ouyang, Hong; Quach, John; Wu, Frances; Qiu, Austin; Luo, Hongrong; Hicks, Caroline; Zeng, Jing; Zhu, Jing; Lu, Jessica; Sfeir, Nicole; Wen, Cindy; Zhang, Meixia; Reade, Victoria; Patel, Sara; Sinden, John; Sun, | The Journal of biological chemistry | 2014 Mar 7 | 6362-71 | 24407289 |
| Mismatches improve the performance of strand-displacement nucleic Acid circuits. | Jiang, Yu Sherry; Bhadra, Sanchita; Li, Bingling; Ellington, Andrew D | Angewandte Chemie (International ed. in English) | 2014 Feb 10 | 1845-8 | 24402831 |
| Global target mRNA specification and regulation by the RNA-binding protein ZFP36. | Mukherjee, Neelanjan; Jacobs, Nicholas C; Hafner, Markus; Kennington, Elizabeth A; Nusbaum, Jeffrey D; Tuschl, Thomas; Blackshear, Perry J; Ohler, Uwe | Genome biology | 2014 Jan 8 | R12 | 24401661 |
| Presentation of BMP-2 mimicking peptides in 3D hydrogels directs cell fate commitment in osteoblasts and mesenchymal stem cells. | Madl, Christopher M; Mehta, Manav; Duda, Georg N; Heilshorn, Sarah C; Mooney, David J | Biomacromolecules | 2014 Feb 10 | 445-55 | 24400664 |
| Electrical Stimulation of the Ventral Tegmental Area Induces Reanimation from General Anesthesia. | Solt, Ken; Van Dort, Christa J; Chemali, Jessica J; Taylor, Norman E; Kenny, Jonathan D; Brown, Emery N | Anesthesiology | 2014 Jan 6 | NULL | 24398816 |
| Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets. | Farazi, Thalia A; Ten Hoeve, Jelle J; Brown, Miguel; Mihailovic, Aleksandra; Horlings, Hugo M; van de Vijver, Marc J; Tuschl, Thomas; Wessels, Lodewyk Fa | Genome biology | 2014 Jan 7 | R9 | 24398324 |
| uPAR-targeted optical imaging contrasts as theranostic agents for tumor margin detection. | Yang, Lily; Sajja, Hari Krishna; Cao, Zehong; Qian, Weiping; Bender, Laura; Marcus, Adam I; Lipowska, Malgorzata; Wood, William C; Wang, Y Andrew | Theranostics | 2013 | 106-18 | 24396518 |
| Plug-and-play fluorophores extend the spectral properties of Spinach. | Song, Wenjiao; Strack, Rita L; Svensen, Nina; Jaffrey, Samie R | Journal of the American Chemical Society | 2014 Jan 29 | 1198-201 | 24393009 |
| Demystifying the nuclear function of Argonaute proteins. | Huang, Vera; Li, Long-Cheng | RNA biology | 2014 Jan | 18-24 | 24384674 |
| Multiple knockout mouse models reveal lincRNAs are required for life and brain development. | Sauvageau, Martin; Goff, Loyal A; Lodato, Simona; Bonev, Boyan; Groff, Abigail F; Gerhardinger, Chiara; Sanchez-Gomez, Diana B; Hacisuleyman, Ezgi; Li, Eric; Spence, Matthew; Liapis, Stephen C; Mallard, William; Morse, Michael; Swerdel, Mavis R; D'Eccless | eLife | 2013 | e01749 | 24381249 |
| Spatial organization of RNA polymerase II inside a mammalian cell nucleus revealed by reflected light-sheet superresolution microscopy. | Zhao, Ziqing W; Roy, Rahul; Gebhardt, J Christof M; Suter, David M; Chapman, Alec R; Xie, X Sunney | Proceedings of the National Academy of Sciences of the United States of America | 2014 Jan 14 | 681-6 | 24379392 |
| High-throughput platform for real-time monitoring of biological processes by multicolor single-molecule fluorescence. | Chen, Jin; Dalal, Ravindra V; Petrov, Alexey N; Tsai, Albert; O'Leary, Sean E; Chapin, Karen; Cheng, Janice; Ewan, Mark; Hsiung, Pei-Lin; Lundquist, Paul; Turner, Stephen W; Hsu, David R; Puglisi, Joseph D | Proceedings of the National Academy of Sciences of the United States of America | 2014 Jan 14 | 664-9 | 24379388 |
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| Growth pattern analysis of murine lung neoplasms by advanced semi-automated quantification of micro-CT images. | Li, Minxing; Jirapatnakul, Artit; Biancardi, Alberto; Riccio, Mark L; Weiss, Robert S; Reeves, Anthony P | PloS one | 2013 | e83806 | 24376755 |
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| Distinct BimBH3 (BimSAHB) Stapled Peptides for Structural and Cellular Studies. | Bird, Greg H; Gavathiotis, Evripidis; Labelle, James L; Katz, Samuel G; Walensky, Loren D | ACS chemical biology | 2014 Jan 3 | NULL | 24358963 |
| Development of neurons and glia. | Pfaff, Samuel; Shaham, Shai | Current opinion in neurobiology | 2013 Dec | 901-2 | 24358527 |
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| Glia and pain: Is chronic pain a gliopathy? | Ji, Ru-Rong; Berta, Temugin; Nedergaard, Maiken | Pain | 2013 Dec | NULL | 24347804 |
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| A phospho-BAD BH3 helix activates glucokinase by a mechanism distinct from that of allosteric activators. | Szlyk, Benjamin; Braun, Craig R; Ljubicic, Sanda; Patton, Elaura; Bird, Gregory H; Osundiji, Mayowa A; Matschinsky, Franz M; Walensky, Loren D; Danial, Nika N | Nature structural & molecular biology | 2014 Jan | 36-42 | 24317490 |
| Identification of a unique TGF-*-dependent molecular and functional signature in microglia. | Butovsky, Oleg; Jedrychowski, Mark P; Moore, Craig S; Cialic, Ron; Lanser, Amanda J; Gabriely, Galina; Koeglsperger, Thomas; Dake, Ben; Wu, Pauline M; Doykan, Camille E; Fanek, Zain; Liu, Liping; Chen, Zhuoxun; Rothstein, Jeffrey D; Ransohoff, Richard M; | Nature neuroscience | 2014 Jan | 131-43 | 24316888 |
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| Interfollicular epidermal stem cells self-renew via autocrine Wnt signaling. | Lim, Xinhong; Tan, Si Hui; Koh, Winston Lian Chye; Chau, Rosanna Man Wah; Yan, Kelley S; Kuo, Calvin J; van Amerongen, Renee; Klein, Allon Moshe; Nusse, Roel | Science (New York, N.Y.) | 2013 Dec 6 | 1226-30 | 24311688 |
| Modulation of leukocyte infiltration and phenotype in microporous tissue engineering scaffolds via vector induced IL-10 expression. | Gower, R Michael; Boehler, Ryan M; Azarin, Samira M; Ricci, Christine F; Leonard, Joshua N; Shea, Lonnie D | Biomaterials | 2014 Feb | 2024-31 | 24309498 |
| Perturbed neural activity disrupts cerebral angiogenesis during a postnatal critical period. | Whiteus, Christina; Freitas, Catarina; Grutzendler, Jaime | Nature | 2013 Dec 4 | NULL | 24305053 |
| Vespucci: a system for building annotated databases of nascent transcripts. | Allison, Karmel A; Kaikkonen, Minna U; Gaasterland, Terry; Glass, Christopher K | Nucleic acids research | 2014 Feb | 2433-47 | 24304890 |
| Epithelial and endothelial damage induced by mechanical ventilation modes. | Suki, Bela; Hubmayr, Rolf | Current opinion in critical care | 2014 Feb | 17-24 | 24300621 |
| Engineering Three-Dimensional Stem Cell Morphogenesis for the Development of Tissue Models and Scalable Regenerative Therapeutics. | Kinney, Melissa A; Hookway, Tracy A; Wang, Yun; McDevitt, Todd C | Annals of biomedical engineering | 2013 Dec 3 | NULL | 24297495 |
| Type II fatty acid biosynthesis is essential for Plasmodium falciparum sporozoite development in the midgut of Anopheles mosquitoes. | van Schaijk, Ben C L; Kumar, T R Santha; Vos, Martijn W; Richman, Adam; van Gemert, Geert-Jan; Li, Tao; Eappen, Abraham G; Williamson, Kim C; Morahan, Belinda J; Fishbaugher, Matt; Kennedy, Mark; Camargo, Nelly; Khan, Shahid M; Janse, Chris J; Sim, Kim Le | Eukaryotic cell | 2014 May | 550-9 | 24297444 |
| Discrimination of potent inhibitors of Toxoplasma gondii enoyl-acyl carrier protein reductase by a thermal shift assay. | Afanador, Gustavo A; Muench, Stephen P; McPhillie, Martin; Fomovska, Alina; Schon, Arne; Zhou, Ying; Cheng, Gang; Stec, Jozef; Freundlich, Joel S; Shieh, Hong-Ming; Anderson, John W; Jacobus, David P; Fidock, David A; Kozikowski, Alan P; Fishwick, Colin W | Biochemistry | 2013 Dec 23 | 9155-66 | 24295325 |
| Characterizing multi-omic data in systems biology. | Mason, Christopher E; Porter, Sandra G; Smith, Todd M | Advances in experimental medicine and biology | 2014 | 15-38 | 24292960 |
| Drosophila life span and physiology are modulated by sexual perception and reward. | Gendron, Christi M; Kuo, Tsung-Han; Harvanek, Zachary M; Chung, Brian Y; Yew, Joanne Y; Dierick, Herman A; Pletcher, Scott D | Science (New York, N.Y.) | 2014 Jan 31 | 544-8 | 24292624 |
| Urinary triclosan is associated with elevated body mass index in NHANES. | Lankester, Joanna; Patel, Chirag; Cullen, Mark R; Ley, Catherine; Parsonnet, Julie | PloS one | 2013 | e80057 | 24278238 |
| Role of childhood infection in the sequelae of H. pylori disease. | Harris, Paul R; Smythies, Lesley E; Smith, Phillip D; Perez-Perez, Guillermo I | Gut microbes | 2013 Nov-Dec | 426-38 | 24275060 |
| The Complex Ethics of First In Human Stem Cell Clinical Trials. | Yarborough, Mark; Tempkin, Teresa; Nolta, Jan; Joyce, Nanette | AJOB neuroscience | 2012 | NULL | 24273680 |
| Subpopulations of myeloid-derived suppressor cells impair T cell responses through independent nitric oxide-related pathways. | Raber, Patrick L; Thevenot, Paul; Sierra, Rosa; Wyczechowska, Dorota; Halle, Daniel; Ramirez, Maria E; Ochoa, Augusto C; Fletcher, Matthew; Velasco, Cruz; Wilk, Anna; Reiss, Krzysztof; Rodriguez, Paulo C | International journal of cancer. | 2014 Jun 15; | 2853-64 | 24259296 |
| Design space for complex DNA structures. | Wei, Bryan; Dai, Mingjie; Myhrvold, Cameron; Ke, Yonggang; Jungmann, Ralf; Yin, Peng | Journal of the American Chemical Society | 2013 Dec 4 | 18080-8 | 24256506 |
| RNA-sequencing from single nuclei. | Grindberg, Rashel V; Yee-Greenbaum, Joyclyn L; McConnell, Michael J; Novotny, Mark; O'Shaughnessy, Andy L; Lambert, Georgina M; Arauzo-Bravo, Marcos J; Lee, Jun; Fishman, Max; Robbins, Gillian E; Lin, Xiaoying; Venepally, Pratap; Badger, Jonathan H; Galbr | Proceedings of the National Academy of Sciences of the United States of America | 2013 Dec 3 | 19802-7 | 24248345 |
| Matrikine and matricellular regulators of EGF receptor signaling on cancer cell migration and invasion. | Grahovac, Jelena; Wells, Alan | Laboratory investigation; a journal of technical methods and pathology | 2014 Jan | 31-40 | 24247562 |
| A liquid array platform for the multiplexed analysis of synthetic molecule-protein interactions. | Doran, Todd M; Kodadek, Thomas | ACS chemical biology | 2014 Feb 21 | 339-46 | 24245981 |
| Two-photon fluorescence spectroscopy and imaging of 4-dimethylaminonaphthalimide Peptide and protein conjugates. | McLean, Alan M; Socher, Elke; Varnavski, Oleg; Clark, Travis B; Imperiali, Barbara; Goodson 3rd, Theodore | The journal of physical chemistry. B | 2013 Dec 19 | 15935-42 | 24245815 |
| Activated ClpP kills persisters and eradicates a chronic biofilm infection. | Conlon, B P; Nakayasu, E S; Fleck, L E; LaFleur, M D; Isabella, V M; Coleman, K; Leonard, S N; Smith, R D; Adkins, J N; Lewis, K | Nature | 2013 Nov 21 | 365-70 | 24226776 |
| Differential requirement for NMDAR activity in SAP97*-mediated regulation of the number and strength of glutamatergic AMPAR-containing synapses. | Liu, Mingna; Lewis, Laura D; Shi, Rebecca; Brown, Emery N; Xu, Weifeng | Journal of neurophysiology | 2014 Feb | 648-58 | 24225540 |
| A RhoC biosensor reveals differences in the activation kinetics of RhoA and RhoC in migrating cells. | Zawistowski, Jon S; Sabouri-Ghomi, Mohsen; Danuser, Gaudenz; Hahn, Klaus M; Hodgson, Louis | PloS one | 2013 | e79877 | 24224016 |
| Directional locomotion of C. elegans in the absence of external stimuli. | Peliti, Margherita; Chuang, John S; Shaham, Shai | PloS one | 2013 | e78535 | 24223821 |
| Co-regulation of primary mouse hepatocyte viability and function by oxygen and matrix. | Buck, Lorenna D; Inman, S Walker; Rusyn, Ivan; Griffith, Linda G | Biotechnology and bioengineering | 2013 Nov 13 | NULL | 24222008 |
| Synthetic DNA vaccines: improved vaccine potency by electroporation and co-delivered genetic adjuvants. | Flingai, Seleeke; Czerwonko, Matias; Goodman, Jonathan; Kudchodkar, Sagar B; Muthumani, Kar; Weiner, David B | Frontiers in immunology | 2013 | 354 | 24204366 |
| A brain-machine interface for control of medically-induced coma. | Shanechi, Maryam M; Chemali, Jessica J; Liberman, Max; Solt, Ken; Brown, Emery N | PLoS computational biology | 2013 Oct | e1003284 | 24204231 |
| Fabrication and application of flexible, multimodal light-emitting devices for wireless optogenetics. | McCall, Jordan G; Kim, Tae-il; Shin, Gunchul; Huang, Xian; Jung, Yei Hwan; Al-Hasani, Ream; Omenetto, Fiorenzo G; Bruchas, Michael R; Rogers, John A | Nature protocols | 2013 Dec | 2413-28 | 24202555 |
| The role of transposable elements in health and diseases of the central nervous system. | Reilly, Matthew T; Faulkner, Geoffrey J; Dubnau, Joshua; Ponomarev, Igor; Gage, Fred H | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2013 Nov 6 | 17577-86 | 24198348 |
| Novel vaccine strategies against tuberculosis: a road less travelled. | Pokkali, Supriya; Jain, Sanjay | Expert review of vaccines | 2013 Dec | 1373-5 | 24195477 |
| Emphysema and mechanical stress-induced lung remodeling. | Suki, Bela; Sato, Susumu; Parameswaran, Harikrishnan; Szabari, Margit V; Takahashi, Ayuko; Bartolak-Suki, Erzsebet | Physiology (Bethesda, Md.) | 2013 Nov | 404-13 | 24186935 |
| Dynamic Recognition of the mRNA Cap by Saccharomyces cerevisiae eIF4E. | O'Leary, Sean E; Petrov, Alexey; Chen, Jin; Puglisi, Joseph D | Structure (London, England : 1993) | 2013 Dec 3 | 2197-207 | 24183571 |
| The Ability of Narrative Communication to Address Health-related Social Norms. | Moran, Meghan Bridgid; Murphy, Sheila T; Frank, Lauren; Baezconde-Garbanati, Lourdes | International Review of Social Research | 2013 Feb | 131-149 | 24179677 |
| Mosaic copy number variation in human neurons. | McConnell, Michael J; Lindberg, Michael R; Brennand, Kristen J; Piper, Julia C; Voet, Thierry; Cowing-Zitron, Chris; Shumilina, Svetlana; Lasken, Roger S; Vermeesch, Joris R; Hall, Ira M; Gage, Fred H | Science (New York, N.Y.) | 2013 Nov 1 | 632-7 | 24179226 |
| Single Cell Analysis of HCV-Infected Patient Hepatocytes: The Science Is No Longer Science Fiction. | Sheahan, Timothy P; Rice, Charles M | Gastroenterology | 2013 Dec | 1199-202 | 24176873 |
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| A superfolding Spinach2 reveals the dynamic nature of trinucleotide repeat-containing RNA. | Strack, Rita L; Disney, Matthew D; Jaffrey, Samie R | Nature methods | 2013 Dec | 1219-24 | 24162923 |
| The mitochondrial fatty acid synthesis (mtFASII) pathway is capable of mediating nuclear-mitochondrial cross talk through the PPAR system of transcriptional activation. | Parl, Angelika; Mitchell, Sabrina L; Clay, Hayley B; Reiss, Sara; Li, Zhen; Murdock, Deborah G | Biochemical and biophysical research communications | 2013 Nov 15 | 418-24 | 24161390 |
| An integrated strategy for efficient vector construction and multi-gene expression in Plasmodium falciparum. | Wagner, Jeffrey C; Goldfless, Stephen J; Ganesan, Suresh M; Lee, Marcus C S; Fidock, David A; Niles, Jacquin C | Malaria journal | 2013 | 373 | 24160265 |
| Genome engineering using the CRISPR-Cas9 system. | Ran, F Ann; Hsu, Patrick D; Wright, Jason; Agarwala, Vineeta; Scott, David A; Zhang, Feng | Nature protocols | 2013 Nov | 2281-308 | 24157548 |
| Portrayals of Reproductive and Sexual Health on Prime-Time Television. | Pariera, Katrina L; Hether, Heather J; Murphy, Sheila T; de Castro Buffington, Sandra; Baezconde-Garbanati, Lourdes | Health communication | 2013 Oct 24 | NULL | 24156468 |
| Next generation sequencing-based molecular diagnosis of retinitis pigmentosa: identification of a novel genotype-phenotype correlation and clinical refinements. | Wang, Feng; Wang, Hui; Tuan, Han-Fang; Nguyen, Duy H; Sun, Vincent; Keser, Vafa; Bowne, Sara J; Sullivan, Lori S; Luo, Hongrong; Zhao, Ling; Wang, Xia; Zaneveld, Jacques E; Salvo, Jason S; Siddiqui, Sorath; Mao, Louise; Wheaton, Dianna K; Birch, David G; | Human genetics | 2014 Mar | 331-45 | 24154662 |
| Differential L1 regulation in pluripotent stem cells of humans and apes. | Marchetto, Maria C N; Narvaiza, Inigo; Denli, Ahmet M; Benner, Christopher; Lazzarini, Thomas A; Nathanson, Jason L; Paquola, Apua C M; Desai, Keval N; Herai, Roberto H; Weitzman, Matthew D; Yeo, Gene W; Muotri, Alysson R; Gage, Fred H | Nature. | 2013 Nov 28; | 525-9 | 24153179 |
| Chromatin remodeling by the small RNA machinery in mammalian cells. | Li, Long-Cheng | Epigenetics : official journal of the DNA Methylation Society | 2014 Jan 1 | 45-52 | 24149777 |
| The strategy, organization, and progress of the HUPO Human Proteome Project. | Omenn, Gilbert S | Journal of proteomics | 2013 Oct 19 | NULL | 24145142 |
| Identification of kinase fusion oncogenes in post-Chernobyl radiation-induced thyroid cancers. | Ricarte-Filho, Julio C; Li, Sheng; Garcia-Rendueles, Maria E R; Montero-Conde, Cristina; Voza, Francesca; Knauf, Jeffrey A; Heguy, Adriana; Viale, Agnes; Bogdanova, Tetyana; Thomas, Geraldine A; Mason, Christopher E; Fagin, James A | The Journal of clinical investigation | 2013 Nov 1 | 4935-44 | 24135138 |
| Towards an understanding of cell-specific functions of signal-dependent transcription factors. | Zhang, Dawn X; Glass, Christopher K | Journal of molecular endocrinology | 2013 Dec | T37-50 | 24130129 |
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| Langerin+ dermal DC, but not Langerhans cells, are required for effective CD8-mediated immune responses after skin scarification with vaccinia virus. | Seneschal, Julien; Jiang, Xiaodong; Kupper, Thomas S | The Journal of investigative dermatology. | 2014 Mar; | 686-94 | 24126845 |
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| Molecular engineering of glycosaminoglycan chemistry for biomolecule delivery. | Miller, Tobias; Goude, Melissa C; McDevitt, Todd C; Temenoff, Johnna S | Acta biomaterialia | 2013 Oct 9 | NULL | 24121191 |
| Super-resolution fluorescence imaging of telomeres reveals TRF2-dependent T-loop formation. | Doksani, Ylli; Wu, John Y; de Lange, Titia; Zhuang, Xiaowei | Cell | 2013 Oct 10 | 345-56 | 24120135 |
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| Distinct splice variants and pathway enrichment in the cell-line models of aggressive human breast cancer subtypes. | Menon, Rajasree; Im, Hogune; Zhang, Emma Yue; Wu, Shiaw-Lin; Chen, Rui; Snyder, Michael; Hancock, William S; Omenn, Gilbert S | Journal of proteome research | 2014 Jan 3 | 212-27 | 24111759 |
| Reference-free harmonic regression technique to remove EEG-fMRI ballistocardiogram artifacts. | Krishnaswamy, Pavitra; Bonmassar, Giorgio; Purdon, Patrick L; Brown, Emery N | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference | 2013 | 5426-9 | 24110963 |
| Pseudomonas aeruginosa Biofilms in Disease. | Mulcahy, Lawrence R; Isabella, Vincent M; Lewis, Kim | Microbial ecology | 2013 Oct 6 | NULL | 24096885 |
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| An automated microfluidic multiplexer for fast delivery of C. elegans populations from multiwells. | Ghorashian, Navid; Gokce, Sertan Kutal; Guo, Sam Xun; Everett, William Neil; Ben-Yakar, Adela | PloS one | 2013 | e74480 | 24069313 |
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| Neural Stem Cells Derived by Small Molecules Preserve Vision. | Lu, Bin; Morgans, Catherine W; Girman, Sergey; Luo, Jing; Zhao, Jiagang; Du, Hongjun; Lim, Sioklam; Ding, Sheng; Svendsen, Clive; Zhang, Kang; Wang, Shaomei | Translational vision science & technology. | 2013 Jan; | 24049711 | |
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| Neurons generated by direct conversion of fibroblasts reproduce synaptic phenotype caused by autism-associated neuroligin-3 mutation. | Chanda, Soham; Marro, Samuele; Wernig, Marius; Sudhof, Thomas C | Proceedings of the National Academy of Sciences of the United States of America | 2013 Oct 8 | 16622-7 | 24046374 |
| A Design Full of Holes: Functional Nanofilm-Coated Microdomains in Alginate Hydrogels. | Roberts, Jason R; Ritter, Dustin W; McShane, Michael J | Journal of materials chemistry. B, Materials for biology and medicine. | 2013; | 3195-3201 | 24040514 |
| Costimulation-Adhesion Blockade is Superior to Cyclosporine A and Prednisone Immunosuppressive Therapy for Preventing Rejection of Differentiated Human Embryonic Stem Cells Following Transplantation. | Huber, Bruno C; Ransohoff, Julia D; Ransohoff, Katherine J; Riegler, Johannes; Ebert, Antje; Kodo, Kazuki; Gong, Yongquan; Sanchez-Freire, Veronica; Dey, Devaveena; Kooreman, Nigel G; Diecke, Sebastian; Zhang, Wendy Y; Odegaard, Justin; Hu, Shijun; Gold, | Stem cells (Dayton, Ohio) | 2013 Aug 16 | NULL | 24038578 |
| Microglia and spinal cord synaptic plasticity in persistent pain. | Taves, Sarah; Berta, Temugin; Chen, Gang; Ji, Ru-Rong | Neural plasticity | 2013 | 753656 | 24024042 |
| Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data. | Rapaport, Franck; Khanin, Raya; Liang, Yupu; Pirun, Mono; Krek, Azra; Zumbo, Paul; Mason, Christopher E; Socci, Nicholas D; Betel, Doron | Genome biology | 2013 Sep 10 | R95 | 24020486 |
| The ins and outs of hepatitis C virus entry and assembly. | Lindenbach, Brett D; Rice, Charles M | Nature reviews. Microbiology | 2013 Oct | 688-700 | 24018384 |
| Polymerization of Protecting-Group-Free Peptides via ROMP. | Kammeyer, Jacquelin K; Blum, Angela P; Adamiak, Lisa; Hahn, Michael E; Gianneschi, Nathan C | Polymer chemistry | 2013 | 3929-3933 | 24015154 |
| Rapid, label-free detection of brain tumors with stimulated Raman scattering microscopy. | Ji, Minbiao; Orringer, Daniel A; Freudiger, Christian W; Ramkissoon, Shakti; Liu, Xiaohui; Lau, Darryl; Golby, Alexandra J; Norton, Isaiah; Hayashi, Marika; Agar, Nathalie Y R; Young, Geoffrey S; Spino, Cathie; Santagata, Sandro; Camelo-Piragua, Sandra; L | Science translational medicine | 2013 Sep 4 | 201ra119 | 24005159 |
| Absolute quantification by droplet digital PCR versus analog real-time PCR. | Hindson, Christopher M; Chevillet, John R; Briggs, Hilary A; Gallichotte, Emily N; Ruf, Ingrid K; Hindson, Benjamin J; Vessella, Robert L; Tewari, Muneesh | Nature methods | 2013 Oct | 1003-5 | 23995387 |
| Novelties in pharmacological management of cardiopulmonary resuscitation. | Bartos, Jason A; Yannopoulos, Demetris | Current opinion in critical care | 2013 Oct | 417-23 | 23995130 |
| Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity. | Ran, F Ann; Hsu, Patrick D; Lin, Chie-Yu; Gootenberg, Jonathan S; Konermann, Silvana; Trevino, Alexandro E; Scott, David A; Inoue, Azusa; Matoba, Shogo; Zhang, Yi; Zhang, Feng | Cell | 2013 Sep 12 | 1380-9 | 23992846 |
| ERK regulation of phosphodiesterase 4 enhances dopamine-stimulated AMPA receptor membrane insertion. | Song, Roy S; Massenburg, Ben; Wenderski, Wendy; Jayaraman, Vino; Thompson, Lauren; Neves, Susana R | Proceedings of the National Academy of Sciences of the United States of America | 2013 Sep 17 | 15437-42 | 23986500 |
| Dissection of the BCR-ABL signaling network using highly specific monobody inhibitors to the SHP2 SH2 domains. | Sha, Fern; Gencer, Emel Basak; Georgeon, Sandrine; Koide, Akiko; Yasui, Norihisa; Koide, Shohei; Hantschel, Oliver | Proceedings of the National Academy of Sciences of the United States of America | 2013 Sep 10 | 14924-9 | 23980151 |
| A feed-forward spinal cord glycinergic neural circuit gates mechanical allodynia. | Lu, Yan; Dong, Hailong; Gao, Yandong; Gong, Yuanyuan; Ren, Yingna; Gu, Nan; Zhou, Shudi; Xia, Nan; Sun, Yan-Yan; Ji, Ru-Rong; Xiong, Lize | The Journal of clinical investigation | 2013 Sep 3 | 4050-62 | 23979158 |
| Targeted disruption of the EZH2-EED complex inhibits EZH2-dependent cancer. | Kim, Woojin; Bird, Gregory H; Neff, Tobias; Guo, Guoji; Kerenyi, Marc A; Walensky, Loren D; Orkin, Stuart H | Nature chemical biology | 2013 Oct | 643-50 | 23974116 |
| Partial proteasome inhibitors induce hair follicle growth by stabilizing *-catenin. | Yucel, Gozde; Van Arnam, John; Means, Paula Casey; Huntzicker, Erik; Altindag, Banu; Lara, Maria Fernanda; Yuan, Jenny; Kuo, Calvin; Oro, Anthony E | Stem cells (Dayton, Ohio) | 2014 Jan | 85-92 | 23963711 |
| Ferrous iron is a significant component of bioavailable iron in cystic fibrosis airways. | Hunter, Ryan C; Asfour, Fadi; Dingemans, Jozef; Osuna, Brenda L; Samad, Tahoura; Malfroot, Anne; Cornelis, Pierre; Newman, Dianne K | mBio | 2013 | NULL | 23963183 |
| Plasticity of basal cells during postnatal development in the rat epididymis. | Shum, Winnie W C; Hill, Eric; Brown, Dennis; Breton, Sylvie | Reproduction (Cambridge, England) | 2013 | 455-69 | 23960170 |
| Pathology imaging informatics for quantitative analysis of whole-slide images. | Kothari, Sonal; Phan, John H; Stokes, Todd H; Wang, May D | Journal of the American Medical Informatics Association : JAMIA | 2013 Nov-Dec | 1099-108 | 23959844 |
| Activation of the Nlrp3 inflammasome in infiltrating macrophages by endocannabinoids mediates beta cell loss in type 2 diabetes. | Jourdan, Tony; Godlewski, Grzegorz; Cinar, Resat; Bertola, Adeline; Szanda, Gergýý; Liu, Jie; Tam, Joseph; Han, Tiffany; Mukhopadhyay, Bani; Skarulis, Monica C; Ju, Cynthia; Aouadi, Myriam; Czech, Michael P; Kunos, George | Nature medicine | 2013 Sep | 1132-40 | 23955712 |
| Loss of NR1 subunit of NMDARs in primary sensory neurons leads to hyperexcitability and pain hypersensitivity: involvement of Ca(2+)-activated small conductance potassium channels. | Pagadala, Promila; Park, Chul-Kyu; Bang, Sangsu; Xu, Zheng-Zhong; Xie, Rou-Gang; Liu, Tong; Han, Bao-Xia; Tracey Jr, W Daniel; Wang, Fan; Ji, Ru-Rong | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2013 Aug 14 | 13425-30 | 23946399 |
| lncRNA-dependent mechanisms of androgen-receptor-regulated gene activation programs. | Yang, Liuqing; Lin, Chunru; Jin, Chunyu; Yang, Joy C; Tanasa, Bogdan; Li, Wenbo; Merkurjev, Daria; Ohgi, Kenneth A; Meng, Da; Zhang, Jie; Evans, Christopher P; Rosenfeld, Michael G | Nature | 2013 Aug 29 | 598-602 | 23945587 |
| Liquid chromatography/mass spectrometry methods for measuring dipeptide abundance in non-small-cell lung cancer. | Wu, Manhong; Xu, Yue; Fitch, William L; Zheng, Ming; Merritt, Robert E; Shrager, Joseph B; Zhang, Weiruo; Dill, David L; Peltz, Gary; Hoang, Chuong D | Rapid communications in mass spectrometry : RCM | 2013 Sep 30 | 2091-8 | 23943330 |
| Circulating microRNA profiling identifies a subset of metastatic prostate cancer patients with evidence of cancer-associated hypoxia. | Cheng, Heather H; Mitchell, Patrick S; Kroh, Evan M; Dowell, Alexander E; Chery, Lisly; Siddiqui, Javed; Nelson, Peter S; Vessella, Robert L; Knudsen, Beatrice S; Chinnaiyan, Arul M; Pienta, Kenneth J; Morrissey, Colm; Tewari, Muneesh | PloS one | 2013 | e69239 | 23935962 |
| Remodeling of the Enhancer Landscape during Macrophage Activation Is Coupled to Enhancer Transcription. | Kaikkonen, Minna U; Spann, Nathanael J; Heinz, Sven; Romanoski, Casey E; Allison, Karmel A; Stender, Joshua D; Chun, Hyun B; Tough, David F; Prinjha, Rab K; Benner, Christopher; Glass, Christopher K | Molecular cell | 2013 Aug 8 | 310-25 | 23932714 |
| Cardiac aging and rejuvenation--a sense of humors? | Rando, Thomas A; Finkel, Toren | The New England journal of medicine. | 2013 Aug 8; | 575-6 | 23924010 |
| Mutations in planar cell polarity gene SCRIB are associated with spina bifida. | Lei, Yunping; Zhu, Huiping; Duhon, Cody; Yang, Wei; Ross, M Elizabeth; Shaw, Gary M; Finnell, Richard H | PloS one | 2013 | e69262 | 23922697 |
| Unifying model for molecular determinants of the preselection Výý repertoire. | Gopalakrishnan, Suhasni; Majumder, Kinjal; Predeus, Alexander; Huang, Yue; Koues, Olivia I; Verma-Gaur, Jiyoti; Loguercio, Salvatore; Su, Andrew I; Feeney, Ann J; Artyomov, Maxim N; Oltz, Eugene M | Proceedings of the National Academy of Sciences of the United States of America | 2013 Aug 20 | E3206-15 | 23918392 |
| Cancer Stem Cells: A Moving Target. | Francipane, Maria Giovanna; Chandler, Julie; Lagasse, Eric | Current pathobiology reports | 2013 Jun 1 | 111-118 | 23914341 |
| Recombinant expression of backbone-cyclized polypeptides. | Borra, Radhika; Camarero, Julio A | Biopolymers | 2013 Sep | 502-9 | 23893781 |
| Autonomous molecular cascades for evaluation of cell surfaces. | Rudchenko, Maria; Taylor, Steven; Pallavi, Payal; Dechkovskaia, Alesia; Khan, Safana; Butler Jr, Vincent P; Rudchenko, Sergei; Stojanovic, Milan N | Nature nanotechnology | 2013 Aug | 580-6 | 23892986 |
| CRISPR RNA-guided activation of endogenous human genes. | Maeder, Morgan L; Linder, Samantha J; Cascio, Vincent M; Fu, Yanfang; Ho, Quan H; Joung, J Keith | Nature methods | 2013 Oct | 977-9 | 23892898 |
| FOXO3 shares common targets with ASCL1 genome-wide and inhibits ASCL1-dependent neurogenesis. | Webb, Ashley E; Pollina, Elizabeth A; Vierbuchen, Thomas; Urban, Noelia; Ucar, Duygu; Leeman, Dena S; Martynoga, Ben; Sewak, Madhavi; Rando, Thomas A; Guillemot, Francois; Wernig, Marius; Brunet, Anne | Cell reports | 2013 Aug 15 | 477-91 | 23891001 |
| Deciphering and reversing tumor immune suppression. | Motz, Greg T; Coukos, George | Immunity | 2013 Jul 25 | 61-73 | 23890064 |
| Multimodal Interaction with BCL-2 Family Proteins Underlies the Proapoptotic Activity of PUMA BH3. | Edwards, Amanda L; Gavathiotis, Evripidis; Labelle, James L; Braun, Craig R; Opoku-Nsiah, Kwadwo A; Bird, Gregory H; Walensky, Loren D | Chemistry & biology | 2013 Jul 25 | 888-902 | 23890007 |
| Local cortical dynamics of burst suppression in the anaesthetized brain. | Lewis, Laura D; Ching, Shinung; Weiner, Veronica S; Peterfreund, Robert A; Eskandar, Emad N; Cash, Sydney S; Brown, Emery N; Purdon, Patrick L | Brain : a journal of neurology | 2013 Sep | 2727-37 | 23887187 |
| Optical control of mammalian endogenous transcription and epigenetic states. | Konermann, Silvana; Brigham, Mark D; Trevino, Alexandro E; Hsu, Patrick D; Heidenreich, Matthias; Cong, Le; Platt, Randall J; Scott, David A; Church, George M; Zhang, Feng | Nature | 2013 Aug 22 | 472-6 | 23877069 |
| The human TUT1 nucleotidyl transferase as a global regulator of microRNA abundance. | Knouf, Emily C; Wyman, Stacia K; Tewari, Muneesh | PloS one | 2013 | e69630 | 23874977 |
| Statistical analysis of molecular signal recording. | Glaser, Joshua I; Zamft, Bradley M; Marblestone, Adam H; Moffitt, Jeffrey R; Tyo, Keith; Boyden, Edward S; Church, George; Kording, Konrad P | PLoS computational biology | 2013 Jul | e1003145 | 23874187 |
| DNA targeting specificity of RNA-guided Cas9 nucleases. | Hsu, Patrick D; Scott, David A; Weinstein, Joshua A; Ran, F Ann; Konermann, Silvana; Agarwala, Vineeta; Li, Yinqing; Fine, Eli J; Wu, Xuebing; Shalem, Ophir; Cradick, Thomas J; Marraffini, Luciano A; Bao, Gang; Zhang, Feng | Nature biotechnology | 2013 Sep | 827-32 | 23873081 |
| Imaging bacterial protein expression using genetically encoded RNA sensors. | Song, Wenjiao; Strack, Rita L; Jaffrey, Samie R | Nature methods | 2013 Jul 21 | NULL | 23872791 |
| The complex relationship between the light-entrainable and methamphetamine-sensitive circadian oscillators: evidence from behavioral studies of Period-mutant mice. | Pendergast, Julie S; Niswender, Kevin D; Yamazaki, Shin | The European journal of neuroscience | 2013 Jul 22 | NULL | 23869717 |
| Look back in anger - what clinical studies tell us about preclinical work. | Hartung, Thomas | ALTEX | 2013 | 275-91 | 23861075 |
| The antimicrobial agent C31G is effective for therapy for HSV-1 ocular keratitis in the rabbit eye model. | Hill, James M; Stern, Ethan M; Bhattacharjee, Partha S; Malamud, Daniel; Clement, Christian; Rodriguez, Paulo; Lukiw, Walter J; Ochoa, Augusto C; Foster, Timothy P; Velasco, Cruz; McFerrin Jr, Harris E | Antiviral research. | 2013 Oct; | 14-9 | 23860013 |
| In Vivo Activation of the p53 Tumor Suppressor Pathway by an Engineered Cyclotide. | Ji, Yanbin; Majumder, Subhabrata; Millard, Melissa; Borra, Radhika; Bi, Tao; Elnagar, Ahmed Y; Neamati, Nouri; Shekhtman, Alexander; Camarero, Julio A | Journal of the American Chemical Society | 2013 Aug 7 | 11623-33 | 23848581 |
| In vivo robotics: the automation of neuroscience and other intact-system biological fields. | Kodandaramaiah, Suhasa B; Boyden, Edward S; Forest, Craig R | Annals of the New York Academy of Sciences | 2013 Dec | 63-71 | 23841584 |
| In vivo robotics: the automation of neuroscience and other intact-system biological fields. | Kodandaramaiah, Suhasa B; Boyden, Edward S; Forest, Craig R | Annals of the New York Academy of Sciences | 2013 Jul 10 | NULL | 23841584 |
| Targeted induction of endogenous NKX3-1 by small activating RNA inhibits prostate tumor growth. | Ren, Shancheng; Kang, Moo Rim; Wang, Ji; Huang, Vera; Place, Robert F; Sun, Yinhao; Li, Long-Cheng | The Prostate | 2013 Oct | 1591-601 | 23836514 |
| Understanding the hepatitis C virus life cycle paves the way for highly effective therapies. | Scheel, Troels K H; Rice, Charles M | Nature medicine | 2013 Jul | 837-49 | 23836234 |
| Pharmacokinetics and tissue distribution of humanin and its analogues in male rodents. | Chin, Yung-Ping; Keni, Jyotsna; Wan, Junxiang; Mehta, Hemal; Anene, Francine; Jia, Yue; Lue, Yan-He; Swerdloff, Ronald; Cobb, Laura J; Wang, Christina; Cohen, Pinchas | Endocrinology | 2013 Jul 8 | NULL | 23836030 |
| Antibiotic exposure and the development of coeliac disease: a nationwide case-control study. | Marild, Karl; Ye, Weimin; Lebwohl, Benjamin; Green, Peter H R; Blaser, Martin J; Card, Tim; Ludvigsson, Jonas F | BMC gastroenterology | 2013 | 109 | 23834758 |
| Characterization of Human Antiviral Adaptive Immune Responses during Hepatotropic Virus Infection in HLA-Transgenic Human Immune System Mice. | Billerbeck, Eva; Horwitz, Joshua A; Labitt, Rachael N; Donovan, Bridget M; Vega, Kevin; Budell, William C; Koo, Gloria C; Rice, Charles M; Ploss, Alexander | Journal of immunology (Baltimore, Md. : 1950) | 2013 Jul 5 | NULL | 23833235 |
| Chemokine contribution to neuropathic pain: respective induction of CXCL1 and CXCR2 in spinal cord astrocytes and neurons. | Zhang, Zhi-Jun; Cao, De-Li; Zhang, Xin; Ji, Ru-Rong; Gao, Yong-Jing | Pain | 2013 Oct | 2185-97 | 23831863 |
| Tissue-nonspecific alkaline phosphatase acts redundantly with PAP and NT5E to generate adenosine in the dorsal spinal cord. | Street, Sarah E; Kramer, Nicholas J; Walsh, Paul L; Taylor-Blake, Bonnie; Yadav, Manisha C; King, Ian F; Vihko, Pirkko; Wightman, R Mark; Millan, Jose Luis; Zylka, Mark J | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2013 Jul 3 | 11314-22 | 23825434 |
| Thalamocortical mechanisms for the anteriorization of alpha rhythms during propofol-induced unconsciousness. | Vijayan, Sujith; Ching, Shinung; Purdon, Patrick L; Brown, Emery N; Kopell, Nancy J | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2013 Jul 3 | 11070-5 | 23825412 |
| The aging brain and anesthesia. | Brown, Emery N; Purdon, Patrick L | Current opinion in anaesthesiology | 2013 Aug | 414-9 | 23820102 |
| Epigenomic control of the innate immune response. | Stender, Joshua D; Glass, Christopher K | Current opinion in pharmacology. | 2013 Aug; | 582-7 | 23816801 |
| Candida krusei colonization in patients with gastrointestinal diseases. | Huong, Duong Thu; Zhao, Yanan; Nguyet, Nguyen Thi; Loan, Ta Thi; Binh, Nguyen Thi Thanh; Thinh, Nguyen Van; Hanh, Nguyen Thi Hong; Perez-Perez, Guillermo I; Perlin, David S | Medical mycology | 2013 Nov | 884-7 | 23815437 |
| Chromatin modifications as determinants of muscle stem cell quiescence and chronological aging. | Liu, Ling; Cheung, Tom H; Charville, Gregory W; Hurgo, Bernadette Marie Ceniza; Leavitt, Tripp; Shih, Johnathan; Brunet, Anne; Rando, Thomas A | Cell reports. | 2013 Jul 11; | 23810552 | |
| Ethnicity is a strong predictor for Helicobacter pylori infection in young women in a multi-ethnic European city. | den Hollander, W J; Holster, I L; den Hoed, C M; van Deurzen, F; van Vuuren, A J; Jaddoe, V W; Hofman, A; Perez, G I Perez; Blaser, M J; Moll, H A; Kuipers, E J | Journal of gastroenterology and hepatology | 2013 Jun 28 | NULL | 23808840 |
| Fuz mutant mice reveal shared mechanisms between ciliopathies and FGF-related syndromes. | Tabler, Jacqueline M; Barrell, William B; Szabo-Rogers, Heather L; Healy, Christopher; Yeung, Yvonne; Perdiguero, Elisa Gomez; Schulz, Christian; Yannakoudakis, Basil Z; Mesbahi, Aida; Wlodarczyk, Bogdan; Geissmann, Frederic; Finnell, Richard H; Wallingfo | Developmental cell | 2013 Jun 24 | 623-35 | 23806618 |
| Chemical synthesis of hydrocarbon-stapled peptides for protein interaction research and therapeutic targeting. | Bird, Gregory H; Crannell, W Christian; Walensky, Loren D | Current protocols in chemical biology | 2011 Sep 1 | 99-117 | 23801563 |
| Scara1 deficiency impairs clearance of soluble amyloid-ýý by mononuclear phagocytes and accelerates Alzheimer's-like disease progression. | Frenkel, Dan; Wilkinson, Kim; Zhao, Lingzhi; Hickman, Suzanne E; Means, Terry K; Puckett, Lindsay; Farfara, Dorit; Kingery, Nathan D; Weiner, Howard L; El Khoury, Joseph | Nature communications | 2013 | 2030 | 23799536 |
| The Dormancy Dilemma: Quiescence versus Balanced Proliferation. | Wells, Alan; Griffith, Linda; Wells, Jakob Z; Taylor, Donald P | Cancer research | 2013 Jun 21 | 23794703 | |
| Glia and pain: Is chronic pain a gliopathy? | Ji, Ru-Rong; Berta, Temugin; Nedergaard, Maiken | Pain | 2013 Jun 20 | NULL | 23792284 |
| Polysaccharide-modified scaffolds for controlled lentivirus delivery in vitro and after spinal cord injury. | Thomas, Aline M; Shea, Lonnie D | Journal of controlled release : official journal of the Controlled Release Society | 2013 Jun 18 | 421-429 | 23791981 |
| Recombinant probes for visualizing endogenous synaptic proteins in living neurons. | Gross, Garrett G; Junge, Jason A; Mora, Rudy J; Kwon, Hyung-Bae; Olson, C Anders; Takahashi, Terry T; Liman, Emily R; Ellis-Davies, Graham C R; McGee, Aaron W; Sabatini, Bernardo L; Roberts, Richard W; Arnold, Don B | Neuron | 2013 Jun 19 | 971-85 | 23791193 |
| Knowledge-Based Design of a Biosensor to Quantify Localized ERK Activation in Living Cells. | Kummer, Lutz; Hsu, Chia-Wen; Dagliyan, Onur; Macnevin, Christopher; Kaufholz, Melanie; Zimmermann, Bastian; Dokholyan, Nikolay V; Hahn, Klaus M; Pluckthun, Andreas | Chemistry & biology | 2013 Jun 20 | 847-56 | 23790495 |
| Simple paper-based test for measuring blood hemoglobin concentration in resource-limited settings. | Yang, Xiaoxi; Piety, Nathaniel Z; Vignes, Seth M; Benton, Melody S; Kanter, Julie; Shevkoplyas, Sergey S | Clinical chemistry | 2013 Oct | 1506-13 | 23788584 |
| TH2 Cytokines from Malignant Cells Suppress TH1 Responses and Enforce a Global TH2 Bias in Leukemic Cutaneous T-cell Lymphoma. | Guenova, Emmanuella; Watanabe, Rei; Teague, Jessica E; Desimone, Jennifer A; Jiang, Ying; Dowlatshahi, Mitra; Schlapbach, Christoph; Schaekel, Knut; Rook, Alain H; Tawa, Marianne; Fisher, David C; Kupper, Thomas S; Clark, Rachael A | Clinical cancer research : an official journal of the American Association for Cancer Research | 2013 Jun 19 | 23785046 | |
| Rapid single-step induction of functional neurons from human pluripotent stem cells. | Zhang, Yingsha; Pak, Changhui; Han, Yan; Ahlenius, Henrik; Zhang, Zhenjie; Chanda, Soham; Marro, Samuele; Patzke, Christopher; Acuna, Claudio; Covy, Jason; Xu, Wei; Yang, Nan; Danko, Tamas; Chen, Lu; Wernig, Marius; Sudhof, Thomas C | Neuron | 2013 Jun 5 | 785-98 | 23764284 |
| Permanent Genetic Access to Transiently Active Neurons via TRAP: Targeted Recombination in Active Populations. | Guenthner, Casey J; Miyamichi, Kazunari; Yang, Helen H; Heller, H Craig; Luo, Liqun | Neuron | 2013 Jun 5 | 773-84 | 23764283 |
| Plasma Processing Conditions Substantially Influence Circulating microRNA Biomarker Levels. | Cheng, Heather H; Yi, Hye Son; Kim, Yeonju; Kroh, Evan M; Chien, Jason W; Eaton, Keith D; Goodman, Marc T; Tait, Jonathan F; Tewari, Muneesh; Pritchard, Colin C | PloS one | 2013 | e64795 | 23762257 |
| Astroglial cells regulate the developmental timeline of human neurons differentiated from induced pluripotent stem cells. | Tang, Xin; Zhou, Li; Wagner, Alecia M; Marchetto, Maria C N; Muotri, Alysson R; Gage, Fred H; Chen, Gong | Stem cell research | 2013 Sep | 743-57 | 23759711 |
| Mesenchymal stem cells for trinucleotide repeat disorders. | Annett, Geralyn; Bauer, Gerhard; Nolta, Jan A | Methods in molecular biology (Clifton, N.J.) | 2013 | 79-91 | 23754220 |
| Pathways in microbe-induced obesity. | Cox, Laura M; Blaser, Martin J | Cell metabolism | 2013 Jun 4 | 883-94 | 23747247 |
| New approaches for sensing metabolites and proteins in live cells using RNA. | Strack, Rita L; Jaffrey, Samie R | Current opinion in chemical biology | 2013 Jun 6 | NULL | 23746618 |
| Common variant in VEGFA and response to anti-VEGF therapy for neovascular age-related macular degeneration. | Zhao, L; Grob, S; Avery, R; Kimura, A; Pieramici, D; Lee, J; Rabena, M; Ortiz, S; Quach, J; Cao, G; Luo, H; Zhang, M; Pei, M; Song, Y; Tornambe, P; Goldbaum, M; Ferreyra, H; Kozak, I; Zhang, K | Current molecular medicine | 2013 Jul | 929-34 | 23745581 |
| A mechanical design principle for tissue structure and function in the airway tree. | LaPrad, Adam S; Lutchen, Kenneth R; Suki, Bela | PLoS computational biology | 2013 May | e1003083 | 23737742 |
| Density-dependent cooperative non-specific binding in solid-phase SELEX affinity selection. | Ozer, Abdullah; White, Brian S; Lis, John T; Shalloway, David | Nucleic acids research | 2013 Aug | 7167-75 | 23737446 |
| Density-dependent cooperative non-specific binding in solid-phase SELEX affinity selection. | Ozer, Abdullah; White, Brian S; Lis, John T; Shalloway, David | Nucleic acids research | 2013 Jun 3 | NULL | 23737446 |
| Complexity and emergent phenomena. | Suki, Bela; Bates, Jason H T; Frey, Urs | Comprehensive Physiology | 2011 Apr | 995-1029 | 23737210 |
| An optimized algorithm for detecting and annotating regional differential methylation. | Li, Sheng; Garrett-Bakelman, Francine E; Akalin, Altuna; Zumbo, Paul; Levine, Ross; To, Bik L; Lewis, Ian D; Brown, Anna L; D'Andrea, Richard J; Melnick, Ari; Mason, Christopher E | BMC bioinformatics | 2013 | S10 | 23735126 |
| Collaborative Chronic Care Networks (C3Ns) to transform chronic illness care. | Margolis, Peter A; Peterson, Laura E; Seid, Michael | Pediatrics | 2013 Jun | S219-23 | 23729764 |
| Identification of small molecules for human hepatocyte expansion and iPS differentiation. | Shan, Jing; Schwartz, Robert E; Ross, Nathan T; Logan, David J; Thomas, David; Duncan, Stephen A; North, Trista E; Goessling, Wolfram; Carpenter, Anne E; Bhatia, Sangeeta N | Nature chemical biology | 2013 Aug | 514-20 | 23728495 |
| Rev-Erbs repress macrophage gene expression by inhibiting enhancer-directed transcription. | Lam, Michael T Y; Cho, Han; Lesch, Hanna P; Gosselin, David; Heinz, Sven; Tanaka-Oishi, Yumiko; Benner, Christopher; Kaikkonen, Minna U; Kim, Aneeza S; Kosaka, Mika; Lee, Cindy Y; Watt, Andy; Grossman, Tamar R; Rosenfeld, Michael G; Evans, Ronald M; Glass, Christopher K | Nature. | 2013 Jun 27; | 511-5 | 23728303 |
| Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation. | Li, Wenbo; Notani, Dimple; Ma, Qi; Tanasa, Bogdan; Nunez, Esperanza; Chen, Aaron Yun; Merkurjev, Daria; Zhang, Jie; Ohgi, Kenneth; Song, Xiaoyuan; Oh, Soohwan; Kim, Hong-Sook; Glass, Christopher K; Rosenfeld, Michael G | Nature | 2013 Jun 2 | 23728302 | |
| Review: toxicometabolomics. | Bouhifd, Mounir; Hartung, Thomas; Hogberg, Helena T; Kleensang, Andre; Zhao, Liang | Journal of applied toxicology : JAT | 2013 Dec | 1365-83 | 23722930 |
| Models of signalling networks - what cell biologists can gain from them and give to them. | Janes, Kevin A; Lauffenburger, Douglas A | Journal of cell science | 2013 May 1 | 1913-21 | 23720376 |
| Tumor suppressors: enhancers or suppressors of regeneration? | Pomerantz, Jason H; Blau, Helen M | Development (Cambridge, England) | 2013 Jun | 2502-12 | 23715544 |
| Enzyme-directed assembly of a nanoparticle probe in tumor tissue. | Chien, Miao-Ping; Thompson, Matthew P; Barback, Christopher V; Ku, Ti-Hsuan; Hall, David J; Gianneschi, Nathan C | Advanced materials (Deerfield Beach, Fla.) | 2013 Jul 12 | 3599-604 | 23712821 |
| Enzyme-Directed Assembly of a Nanoparticle Probe in Tumor Tissue. | Chien, Miao-Ping; Thompson, Matthew P; Barback, Christopher V; Ku, Ti-Hsuan; Hall, David J; Gianneschi, Nathan C | Advanced materials (Deerfield Beach, Fla.) | 2013 May 28 | 23712821 | |
| Angiophagy: mechanism of microvascular recanalization independent of the fibrinolytic system. | Grutzendler, Jaime | Stroke; a journal of cerebral circulation | 2013 Jun | S84-6 | 23709741 |
| MicroRNA target site identification by integrating sequence and binding information. | Majoros, William H; Lekprasert, Parawee; Mukherjee, Neelanjan; Skalsky, Rebecca L; Corcoran, David L; Cullen, Bryan R; Ohler, Uwe | Nature methods | 2013 Jul | 630-3 | 23708386 |
| Tissue plasminogen activator contributes to morphine tolerance and induces mechanical allodynia via astrocytic IL-1ýý and ERK signaling in the spinal cord of mice. | Berta, T; Liu, Y-C; Xu, Z-Z; Ji, R-R | Neuroscience | 2013 May 21 | 23707980 | |
| Local recurrence following lung cancer surgery: incidence, risk factors, and outcomes. | Fedor, David; Johnson, W Rainey; Singhal, Sunil | Surgical oncology | 2013 Sep | 156-61 | 23702313 |
| RNA Protein Interaction in Neurons. | Darnell, Robert B | Annual review of neuroscience | 2013 May 20 | 23701460 | |
| Potentiation of Azole Antifungals by 2-adamantanamine. | Lafleur, Michael D; Sun, Lingmei; Lister, Ida; Keating, John; Nantel, Andre; Long, Lisa; Ghannoum, Mahmoud; North, Jeffrey; Lee, Richard E; Coleman, Ken; Dahl, Thomas; Lewis, Kim | Antimicrobial agents and chemotherapy | 2013 May 20 | NULL | 23689724 |
| The cytoprotective peptide humanin is induced and neutralizes Bax after pro-apoptotic stress in the rat testis. | Jia, Y; Lue, Y-H; Swerdloff, R; Lee, K-W; Cobb, L J; Cohen, P; Wang, C | Andrology | 2013 Jul | 651-9 | 23686888 |
| Neuroprotectin/Protectin D1 protects neuropathic pain in mice after nerve trauma. | Xu, Zhen-Zhong; Liu, Xing-Jun; Berta, Temugin; Park, Chul-Kyu; Lu, Ning; Serhan, Charles N; Ji, Ru-Rong | Annals of neurology | 2013 May 18 | 23686636 | |
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| ADAM-10 and -17 regulate endometriotic cell migration via concerted ligand and receptor shedding feedback on kinase signaling. | Miller, Miles A; Meyer, Aaron S; Beste, Michael T; Lasisi, Zainab; Reddy, Sonika; Jeng, Karen W; Chen, Chia-Hung; Han, Jongyoon; Isaacson, Keith; Griffith, Linda G; Lauffenburger, Douglas A | Proceedings of the National Academy of Sciences of the United States of America | 2013 May 28 | E2074-83 | 23674691 |
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| The relationship between red blood cell deformability metrics and perfusion of an artificial microvascular network. | Sosa, Jose M; Nielsen, Nathan D; Vignes, Seth M; Chen, Tanya G; Shevkoplyas, Sergey S | Clinical hemorheology and microcirculation | 2013 Apr 19 | 23603326 | |
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| Injectable, cellular-scale optoelectronics with applications for wireless optogenetics. | Kim, Tae-il; McCall, Jordan G; Jung, Yei Hwan; Huang, Xian; Siuda, Edward R; Li, Yuhang; Song, Jizhou; Song, Young Min; Pao, Hsuan An; Kim, Rak-Hwan; Lu, Chaofeng; Lee, Sung Dan; Song, Il-Sun; Shin, Gunchul; Al-Hasani, Ream; Kim, Stanley; Tan, Meng Peun; | Science (New York, N.Y.) | 2013 Apr 12 | 211-6 | 23580530 |
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| The effect of desulfation of chondroitin sulfate on interactions with positively charged growth factors and upregulation of cartilaginous markers in encapsulated MSCs. | Lim, Jeremy J; Temenoff, Johnna S | Biomaterials | 2013 Jul | 5007-18 | 23570717 |
| Metabolomic-derived novel cyst fluid biomarkers for pancreatic cysts: glucose and kynurenine. | Park, Walter G; Wu, Manhong; Bowen, Raffick; Zheng, Ming; Fitch, William L; Pai, Reetesh K; Wodziak, Dariusz; Visser, Brendan C; Poultsides, George A; Norton, Jeff A; Banerjee, Subhas; Chen, Ann M; Friedland, Shai; Scott, Brennan A; Pasricha, Pankaj Jay; | Gastrointestinal endoscopy | 2013 Apr 5 | 23566642 | |
| Activation of transposable elements during aging and neuronal decline in Drosophila. | Li, Wanhe; Prazak, Lisa; Chatterjee, Nabanita; Gruninger, Servan; Krug, Lisa; Theodorou, Delphine; Dubnau, Josh | Nature neuroscience | 2013 May | 529-31 | 23563579 |
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| Enhanced efficiency of human pluripotent stem cell genome editing through replacing TALENs with CRISPRs. | Ding, Qiurong; Regan, Stephanie N; Xia, Yulei; Oostrom, Leonie A; Cowan, Chad A; Musunuru, Kiran | Cell stem cell | 2013 Apr 4 | 393-4 | 23561441 |
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| The matrikine tenascin-C protects multipotential stromal cells/mesenchymal stem cells from death cytokines such as FasL. | Rodrigues, Melanie; Yates, Cecelia C; Nuschke, Austin; Griffith, Linda; Wells, Alan | Tissue engineering. Part A | 2013 Sep | 1972-83 | 23541003 |
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| Peptidergic CGRPýý primary sensory neurons encode heat and itch and tonically suppress sensitivity to cold. | McCoy, Eric S; Taylor-Blake, Bonnie; Street, Sarah E; Pribisko, Alaine L; Zheng, Jihong; Zylka, Mark J | Neuron | 2013 Apr 10 | 138-51 | 23523592 |
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| Human hemato-lymphoid system mice: current use and future potential for medicine. | Rongvaux, Anthony; Takizawa, Hitoshi; Strowig, Till; Willinger, Tim; Eynon, Elizabeth E; Flavell, Richard A; Manz, Markus G | Annual review of immunology | 2013 | 635-74 | 23330956 |
| Modeling boundary conditions for balanced proliferation in metastatic latency. | Taylor, Donald P; Wells, Jakob Z; Savol, Andrej; Chennubhotla, Chakra; Wells, Alan | Clinical cancer research : an official journal of the American Association for Cancer Research | 2013 Mar 1 | 1063-70 | 23329811 |
| Combined effects of ventilation mode and positive end-expiratory pressure on mechanics, gas exchange and the epithelium in mice with acute lung injury. | Thammanomai, Apiradee; Hamakawa, Hiroshi; Bartolak-Suki, Erzsebet; Suki, Bela | PloS one | 2013 | e53934 | 23326543 |
| Computational analysis of Rho GTPase cycling. | Falkenberg, Cibele Vieira; Loew, Leslie M | PLoS computational biology | 2013 Jan | e1002831 | 23326220 |
| Two novel DEG/ENaC channel subunits expressed in glia are needed for nose-touch sensitivity in Caenorhabditis elegans. | Han, Lu; Wang, Ying; Sangaletti, Rachele; D'Urso, Giulia; Lu, Yun; Shaham, Shai; Bianchi, Laura | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2013 Jan 16 | 936-49 | 23325233 |
| Expression of fluorescent cyclotides using protein trans-splicing for easy monitoring of cyclotide-protein interactions. | Jagadish, Krishnappa; Borra, Radhika; Lacey, Vanessa; Majumder, Subhabrata; Shekhtman, Alexander; Wang, Lei; Camarero, Julio A | Angewandte Chemie (International ed. in English) | 2013 Mar 11 | 3126-31 | 23322720 |
| Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits. | Xue, Yuanchao; Ouyang, Kunfu; Huang, Jie; Zhou, Yu; Ouyang, Hong; Li, Hairi; Wang, Gang; Wu, Qijia; Wei, Chaoliang; Bi, Yanzhen; Jiang, Li; Cai, Zhiqiang; Sun, Hui; Zhang, Kang; Zhang, Yi; Chen, Ju; Fu, Xiang-Dong | Cell | 2013 Jan 17 | 82-96 | 23313552 |
| Charge-based forces at the Nafion-water interface. | Das, Ronnie; Pollack, Gerald H | Langmuir : the ACS journal of surfaces and colloids | 2013 Feb 26 | 2651-8 | 23311934 |
| Phosphine quenching of cyanine dyes as a versatile tool for fluorescence microscopy. | Vaughan, Joshua C; Dempsey, Graham T; Sun, Eileen; Zhuang, Xiaowei | Journal of the American Chemical Society | 2013 Jan 30 | 1197-200 | 23311875 |
| The Jeremiah Metzger lecture: Global warming redux: the disappearing microbiota and epidemic obesity. | Blaser, Martin J | Transactions of the American Clinical and Climatological Association | 2012 | 230-8; discussion 239-41 | 23303990 |
| Association between Helicobacter pylori and mortality in the NHANES III study. | Chen, Yu; Segers, Stephanie; Blaser, Martin J | Gut | 2013 Sep | 1262-9 | 23303440 |
| Endothelial cell phenotypic behaviors cluster into dynamic state transition programs modulated by angiogenic and angiostatic cytokines. | Rimchala, Tharathorn; Kamm, Roger D; Lauffenburger, Douglas A | Integrative biology : quantitative biosciences from nano to macro | 2013 Mar | 510-22 | 23303249 |
| Identification of Pseudomonas aeruginosa phenazines that kill Caenorhabditis elegans. | Cezairliyan, Brent; Vinayavekhin, Nawaporn; Grenfell-Lee, Daniel; Yuen, Grace J; Saghatelian, Alan; Ausubel, Frederick M | PLoS pathogens | 2013 Jan | e1003101 | 23300454 |
| Targeted delivery of siRNA-generating DNA nanocassettes using multifunctional nanoparticles. | Cho, Young-Seok; Lee, Gee Young; Sajja, Hari Krishna; Qian, Weiping; Cao, Zehong; He, Weiling; Karna, Prasanthi; Chen, Xiaoyuan; Mao, Hui; Wang, Y Andrew; Yang, Lily | Small (Weinheim an der Bergstrasse, Germany) | 2013 Jun 10 | 1964-73 | 23292656 |
| Multiplex genome engineering using CRISPR/Cas systems. | Cong, Le; Ran, F Ann; Cox, David; Lin, Shuailiang; Barretto, Robert; Habib, Naomi; Hsu, Patrick D; Wu, Xuebing; Jiang, Wenyan; Marraffini, Luciano A; Zhang, Feng | Science (New York, N.Y.) | 2013 Feb 15 | 819-23 | 23287718 |
| Fluctuation analysis of activity biosensor images for the study of information flow in signaling pathways. | Vilela, Marco; Halidi, Nadia; Besson, Sebastien; Elliott, Hunter; Hahn, Klaus; Tytell, Jessica; Danuser, Gaudenz | Methods in enzymology | 2013 | 253-76 | 23280114 |
| An indirect approach to generating specific human cell types. | Lujan, Ernesto; Wernig, Marius | Nature methods | 2013 Jan | 44-5 | 23269377 |
| Two methods for full-length RNA sequencing for low quantities of cells and single cells. | Pan, Xinghua; Durrett, Russell E; Zhu, Haiying; Tanaka, Yoshiaki; Li, Yumei; Zi, Xiaoyuan; Marjani, Sadie L; Euskirchen, Ghia; Ma, Chao; Lamotte, Robert H; Park, In-Hyun; Snyder, Michael P; Mason, Christopher E; Weissman, Sherman M | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jan 8 | 594-9 | 23267071 |
| Hyperspectral imaging with stimulated Raman scattering by chirped femtosecond lasers. | Fu, Dan; Holtom, Gary; Freudiger, Christian; Zhang, Xu; Xie, Xiaoliang Sunney | The journal of physical chemistry. B | 2013 Apr 25 | 4634-40 | 23256635 |
| Millisecond spatiotemporal dynamics of FRET biosensors by the pair correlation function and the phasor approach to FLIM. | Hinde, Elizabeth; Digman, Michelle A; Hahn, Klaus M; Gratton, Enrico | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jan 2 | 135-40 | 23248275 |
| A TALEN genome-editing system for generating human stem cell-based disease models. | Ding, Qiurong; Lee, Youn-Kyoung; Schaefer, Esperance A K; Peters, Derek T; Veres, Adrian; Kim, Kevin; Kuperwasser, Nicolas; Motola, Daniel L; Meissner, Torsten B; Hendriks, William T; Trevisan, Marta; Gupta, Rajat M; Moisan, Annie; Banks, Eric; Friesen, M | Cell stem cell | 2013 Feb 7 | 238-51 | 23246482 |
| ýý-Catenin-driven cancers require a YAP1 transcriptional complex for survival and tumorigenesis. | Rosenbluh, Joseph; Nijhawan, Deepak; Cox, Andrew G; Li, Xingnan; Neal, James T; Schafer, Eric J; Zack, Travis I; Wang, Xiaoxing; Tsherniak, Aviad; Schinzel, Anna C; Shao, Diane D; Schumacher, Steven E; Weir, Barbara A; Vazquez, Francisca; Cowley, Glenn S; | Cell | 2012 Dec 21 | 1457-73 | 23245941 |
| Pluripotent stem cells: immune to the immune system? | Pearl, Jeremy I; Kean, Leslie S; Davis, Mark M; Wu, Joseph C | Science translational medicine | 2012 Dec 12 | 164ps25 | 23241742 |
| The emerging role of the mitochondrial-derived peptide humanin in stress resistance. | Yen, Kelvin; Lee, Changhan; Mehta, Hemal; Cohen, Pinchas | Journal of molecular endocrinology | 2013 Feb | R11-9 | 23239898 |
| Actin, spectrin, and associated proteins form a periodic cytoskeletal structure in axons. | Xu, Ke; Zhong, Guisheng; Zhuang, Xiaowei | Science (New York, N.Y.) | 2013 Jan 25 | 452-6 | 23239625 |
| FRET-capture: a sensitive method for the detection of dynamic protein interactions. | Socher, Elke; Imperiali, Barbara | Chembiochem : a European journal of chemical biology | 2013 Jan 2 | 53-7 | 23239458 |
| FMRP targets distinct mRNA sequence elements to regulate protein expression. | Ascano Jr, Manuel; Mukherjee, Neelanjan; Bandaru, Pradeep; Miller, Jason B; Nusbaum, Jeffrey D; Corcoran, David L; Langlois, Christine; Munschauer, Mathias; Dewell, Scott; Hafner, Markus; Williams, Zev; Ohler, Uwe; Tuschl, Thomas | Nature | 2012 Dec 20 | 382-6 | 23235829 |
| CD8(+) T cells in the lesional skin of atopic dermatitis and psoriasis patients are an important source of IFN-ýý, IL-13, IL-17, and IL-22. | Hijnen, Dirkjan; Knol, Edward F; Gent, Yoony Y; Giovannone, Barbara; Beijn, Scott J P; Kupper, Thomas S; Bruijnzeel-Koomen, Carla A F M; Clark, Rachael A | The Journal of investigative dermatology. | 2013 Apr; | 973-9 | 23223131 |
| Activation of D1 dopamine receptors induces emergence from isoflurane general anesthesia. | Taylor, Norman E; Chemali, Jessica J; Brown, Emery N; Solt, Ken | Anesthesiology | 2013 Jan | 30-9 | 23221866 |
| Circulating humanin levels are associated with preserved coronary endothelial function. | Widmer, R J; Flammer, A J; Herrmann, J; Rodriguez-Porcel, M; Wan, J; Cohen, P; Lerman, L O; Lerman, A | American journal of physiology. Heart and circulatory physiology | 2013 Feb 1 | H393-7 | 23220334 |
| Emerging strategies for spatiotemporal control of stem cell fate and morphogenesis. | Kinney, Melissa A; McDevitt, Todd C | Trends in biotechnology | 2013 Feb | 78-84 | 23219200 |
| Barriers of hepatitis C virus interspecies transmission. | Sandmann, Lisa; Ploss, Alexander | Virology | 2013 Jan 5 | 70-80 | 23217617 |
| A critical role for AID in the initiation of reprogramming to induced pluripotent stem cells. | Bhutani, Nidhi; Decker, Matthew N; Brady, Jennifer J; Bussat, Rose T; Burns, David M; Corbel, Stephane Y; Blau, Helen M | FASEB journal : official publication of the Federation of American Societies for Experimental Biology | 2013 Mar | 1107-13 | 23212122 |
| The non-human primate reference transcriptome resource (NHPRTR) for comparative functional genomics. | Pipes, Lenore; Li, Sheng; Bozinoski, Marjan; Palermo, Robert; Peng, Xinxia; Blood, Phillip; Kelly, Sara; Weiss, Jeffrey M; Thierry-Mieg, Jean; Thierry-Mieg, Danielle; Zumbo, Paul; Chen, Ronghua; Schroth, Gary P; Mason, Christopher E; Katze, Michael G | Nucleic acids research | 2013 Jan | D906-14 | 23203872 |
| High-throughput screen identifies cyclic nucleotide analogs that inhibit prostatic acid phosphatase. | McCoy, Eric S; Lea, Wendy A; Mott, Bryan T; Maloney, David J; Jadhav, Ajit; Simeonov, Anton; Zylka, Mark J | Journal of biomolecular screening | 2013 Apr | 481-9 | 23190738 |
| Genome-wide methylation profiles reveal quantitative views of human aging rates. | Hannum, Gregory; Guinney, Justin; Zhao, Ling; Zhang, Li; Hughes, Guy; Sadda, SriniVas; Klotzle, Brandy; Bibikova, Marina; Fan, Jian-Bing; Gao, Yuan; Deconde, Rob; Chen, Menzies; Rajapakse, Indika; Friend, Stephen; Ideker, Trey; Zhang, Kang | Molecular cell | 2013 Jan 24 | 359-67 | 23177740 |
| In vivo directed differentiation of pluripotent stem cells for skeletal regeneration. | Levi, Benjamin; Hyun, Jeong S; Montoro, Daniel T; Lo, David D; Chan, Charles K F; Hu, Shijun; Sun, Ning; Lee, Min; Grova, Monica; Connolly, Andrew J; Wu, Joseph C; Gurtner, Geoffrey C; Weissman, Irving L; Wan, Derrick C; Longaker, Michael T | Proceedings of the National Academy of Sciences of the United States of America | 2012 Dec 11 | 20379-84 | 23169671 |
| Adaptation and clonal selection models of castration-resistant prostate cancer: current perspective. | Ahmed, Muhammed; Li, Long-Cheng | International journal of urology : official journal of the Japanese Urological Association | 2013 Apr | 362-71 | 23163774 |
| Multiplexed protease activity assay for low-volume clinical samples using droplet-based microfluidics and its application to endometriosis. | Chen, Chia-Hung; Miller, Miles A; Sarkar, Aniruddh; Beste, Michael T; Isaacson, Keith B; Lauffenburger, Douglas A; Griffith, Linda G; Han, Jongyoon | Journal of the American Chemical Society | 2013 Feb 6 | 1645-8 | 23157326 |
| Integration and long distance axonal regeneration in the central nervous system from transplanted primitive neural stem cells. | Zhao, Jiagang; Sun, Woong; Cho, Hyo Min; Ouyang, Hong; Li, Wenlin; Lin, Ying; Do, Jiun; Zhang, Liangfang; Ding, Sheng; Liu, Yizhi; Lu, Paul; Zhang, Kang | The Journal of biological chemistry | 2013 Jan 4 | 164-8 | 23155053 |
| The nonfermentable dietary fiber hydroxypropyl methylcellulose modulates intestinal microbiota. | Cox, Laura M; Cho, Ilseung; Young, Scott A; Anderson, W H Kerr; Waters, Bartholomew J; Hung, Shao-Ching; Gao, Zhan; Mahana, Douglas; Bihan, Monika; Alekseyenko, Alexander V; Methé, Barbara A; Blaser, Martin J | FASEB journal : official publication of the Federation of American Societies for Experimental Biology. | 2013 Feb; | 23154883 | |
| Vaccination with synthetic constructs expressing cytomegalovirus immunogens is highly T cell immunogenic in mice. | Shedlock, Devon J; Talbott, Kendra T; Wu, Stephan J; Wilson, Christine M; Muthumani, Karuppiah; Boyer, Jean D; Sardesai, Niranjan Y; Awasthi, Sita; Weiner, David B | Human vaccines & immunotherapeutics | 2012 Nov 1 | 1668-81 | 23151448 |
| Design of a novel cyclotide-based CXCR4 antagonist with anti-human immunodeficiency virus (HIV)-1 activity. | Aboye, Teshome L; Ha, Helen; Majumder, Subhabrata; Christ, Frauke; Debyser, Zeger; Shekhtman, Alexander; Neamati, Nouri; Camarero, Julio A | Journal of medicinal chemistry | 2012 Dec 13 | 10729-34 | 23151033 |
| Using chimeric mice with humanized livers to predict human drug metabolism and a drug-drug interaction. | Nishimura, Toshiko; Hu, Yajing; Wu, Manhong; Pham, Edward; Suemizu, Hiroshi; Elazar, Menashe; Liu, Michael; Idilman, Ramazan; Yurdaydin, Cihan; Angus, Peter; Stedman, Catherine; Murphy, Brian; Glenn, Jeffrey; Nakamura, Masato; Nomura, Tatsuji; Chen, Yuan; | The Journal of pharmacology and experimental therapeutics | 2013 Feb | 388-96 | 23143674 |
| Unraveling the dynamics of ribosome translocation. | Chen, Jin; Tsai, Albert; O'Leary, Sean E; Petrov, Alexey; Puglisi, Joseph D | Current opinion in structural biology | 2012 Dec | 804-14 | 23142574 |
| Transcriptome-wide miR-155 binding map reveals widespread noncanonical microRNA targeting. | Loeb, Gabriel B; Khan, Aly A; Canner, David; Hiatt, Joseph B; Shendure, Jay; Darnell, Robert B; Leslie, Christina S; Rudensky, Alexander Y | Molecular cell. | 2012 Dec 14; | 23142080 | |
| Coupling two different nucleic acid circuits in an enzyme-free amplifier. | Jiang, Yu; Li, Bingling; Chen, Xi; Ellington, Andrew D | Molecules (Basel, Switzerland) | 2012 | 13211-20 | 23132138 |
| Single-round, multiplexed antibody mimetic design through mRNA display. | Olson, C Anders; Nie, Jeff; Diep, Jonathan; Al-Shyoukh, Ibrahim; Takahashi, Terry T; Al-Mawsawi, Laith Q; Bolin, Jennifer M; Elwell, Angela L; Swanson, Scott; Stewart, Ron; Thomson, James A; Soh, H Tom; Roberts, Richard W; Sun, Ren | Angewandte Chemie (International ed. in English) | 2012 Dec 7 | 12449-53 | 23125174 |
| Prostatic acid phosphatase is required for the antinociceptive effects of thiamine and benfotiamine. | Hurt, Julie K; Coleman, Jennifer L; Fitzpatrick, Brendan J; Taylor-Blake, Bonnie; Bridges, Arlene S; Vihko, Pirkko; Zylka, Mark J | PloS one | 2012 | e48562 | 23119057 |
| A new way to start: nanoRNA-mediated priming of transcription initiation. | Nickels, Bryce E | Transcription | 2012 Nov 1 | 23117822 | |
| The birth of the Epitranscriptome: deciphering the function of RNA modifications. | Saletore, Yogesh; Meyer, Kate; Korlach, Jonas; Vilfan, Igor D; Jaffrey, Samie; Mason, Christopher E | Genome biology | 2012 Oct 31 | 175 | 23113984 |
| Sequencing the connectome. | Zador, Anthony M; Dubnau, Joshua; Oyibo, Hassana K; Zhan, Huiqing; Cao, Gang; Peikon, Ian D | PLoS biology | 2012 | e1001411 | 23109909 |
| Returns of the living dead: therapeutic action of irradiated and mitotically inactivated embryonic stem cells. | Gold, Joseph D; Wu, Joseph C | Circulation research | 2012 Oct 26 | 1250-2 | 23104873 |
| Ultrabright photoactivatable fluorophores created by reductive caging. | Vaughan, Joshua C; Jia, Shu; Zhuang, Xiaowei | Nature methods | 2012 Dec | 1181-4 | 23103881 |
| Opiate-induced changes in brain adenosine levels and narcotic drug responses. | Wu, M; Sahbaie, P; Zheng, M; Lobato, R; Boison, D; Clark, J D; Peltz, G | Neuroscience | 2013 Jan 3 | 235-42 | 23098802 |
| Compact quantum dots for single-molecule imaging. | Smith, Andrew M; Nie, Shuming | Journal of visualized experiments : JoVE | 2012 | NULL | 23093375 |
| In vivo imaging of cerebral microvascular plasticity from birth to death. | Harb, Roa; Whiteus, Christina; Freitas, Catarina; Grutzendler, Jaime | Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism | 2013 Jan | 146-56 | 23093067 |
| GLP-1 analog attenuates cocaine reward. | Graham, D L; Erreger, K; Galli, A; Stanwood, G D | Molecular psychiatry | 2012 Oct 23 | 23089631 | |
| Systems memory consolidation in Drosophila. | Dubnau, Josh; Chiang, Ann-Shyn | Current opinion in neurobiology | 2013 Feb | 84-91 | 23084099 |
| A prion-mediated mechanism for memory proposed in Drosophila. | Li, Wanhe; Dubnau, Josh | Neuron | 2012 Oct 18 | 260-2 | 23083729 |
| Identification of drug targets by chemogenomic and metabolomic profiling in yeast. | Wu, Manhong; Zheng, Ming; Zhang, Weiruo; Suresh, Sundari; Schlecht, Ulrich; Fitch, William L; Aronova, Sofia; Baumann, Stephan; Davis, Ronald; St Onge, Robert; Dill, David L; Peltz, Gary | Pharmacogenetics and genomics | 2012 Dec | 877-86 | 23076370 |
| A GCH1 haplotype and risk of neural tube defects in the National Birth Defects Prevention Study. | Lupo, Philip J; Chapa, Claudia; Nousome, Darryl; Duhon, Cody; Canfield, Mark A; Shaw, Gary M; Finnell, Richard H; Zhu, Huiping; National Birth Defects Prevention Study | Molecular genetics and metabolism | 2012 Nov | 592-5 | 23059057 |
| Bioengineering methods for analysis of cells in vitro. | Underhill, Gregory H; Galie, Peter; Chen, Christopher S; Bhatia, Sangeeta N | Annual review of cell and developmental biology | 2012 | 385-410 | 23057744 |
| Regenerative medicine for the special senses: restoring the inputs. | Bermingham-McDonogh, Olivia; Corwin, Jeffrey T; Hauswirth, William W; Heller, Stefan; Reed, Randall; Reh, Thomas A | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2012 Oct 10 | 14053-7 | 23055472 |
| Immunotherapy against HPV16/18 generates potent TH1 and cytotoxic cellular immune responses. | Bagarazzi, Mark L; Yan, Jian; Morrow, Matthew P; Shen, Xuefei; Parker, R Lamar; Lee, Jessica C; Giffear, Mary; Pankhong, Panyupa; Khan, Amir S; Broderick, Kate E; Knott, Christine; Lin, Feng; Boyer, Jean D; Draghia-Akli, Ruxandra; White, C Jo; Kim, J Jose | Science translational medicine | 2012 Oct 10 | 155ra138 | 23052295 |
| A randomized controlled trial to evaluate the effects of high-dose versus low-dose of arginine therapy on hepatic function tests in argininosuccinic aciduria. | Nagamani, Sandesh C S; Shchelochkov, Oleg A; Mullins, Mary A; Carter, Susan; Lanpher, Brendan C; Sun, Qin; Kleppe, Soledad; Erez, Ayelet; O'Brian Smith, E; Marini, Juan C; Members of the Urea Cycle Disorders Consortium; Lee, Brendan | Molecular genetics and metabolism | 2012 Nov | 315-21 | 23040521 |
| Synthetic DNA immunogen encoding hepatitis B core antigen drives immune response in liver. | Obeng-Adjei, N; Choo, D K; Saini, J; Yan, J; Pankhong, P; Parikh, A; Chu, J S; Weiner, D B | Cancer gene therapy | 2012 Nov | 779-87 | 23037809 |
| methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles. | Akalin, Altuna; Kormaksson, Matthias; Li, Sheng; Garrett-Bakelman, Francine E; Figueroa, Maria E; Melnick, Ari; Mason, Christopher E | Genome biology | 2012 Oct 3 | R87 | 23034086 |
| Neuroprotective efficacy of aminopropyl carbazoles in a mouse model of Parkinson disease. | De Jesus-Cortes, Hector; Xu, Pin; Drawbridge, Jordan; Estill, Sandi Jo; Huntington, Paula; Tran, Stephanie; Britt, Jeremiah; Tesla, Rachel; Morlock, Lorraine; Naidoo, Jacinth; Melito, Lisa M; Wang, Gelin; Williams, Noelle S; Ready, Joseph M; McKnight, Ste | Proceedings of the National Academy of Sciences of the United States of America | 2012 Oct 16 | 17010-5 | 23027934 |
| Neuroprotective efficacy of aminopropyl carbazoles in a mouse model of amyotrophic lateral sclerosis. | Tesla, Rachel; Wolf, Hamilton Parker; Xu, Pin; Drawbridge, Jordan; Estill, Sandi Jo; Huntington, Paula; McDaniel, Latisha; Knobbe, Whitney; Burket, Aaron; Tran, Stephanie; Starwalt, Ruth; Morlock, Lorraine; Naidoo, Jacinth; Williams, Noelle S; Ready, Jose | Proceedings of the National Academy of Sciences of the United States of America | 2012 Oct 16 | 17016-21 | 23027932 |
| Molecular roadblocks for cellular reprogramming. | Vierbuchen, Thomas; Wernig, Marius | Molecular cell | 2012 Sep 28 | 827-38 | 23020854 |
| Highly specific label-free molecular imaging with spectrally tailored excitation stimulated Raman scattering (STE-SRS) microscopy. | Freudiger, Christian W; Min, Wei; Holtom, Gary R; Xu, Bingwei; Dantus, Marcos; Xie, X Sunney | Nature photonics | 2011 | 103-109 | 23015809 |
| Integrating image analysis algorithms in a web interface for the quantification of microtubule dynamics. | Kong, Koon Yin; Marcus, Adam I; Giannakakou, Paraskevi; Wang, May Dongmei | International journal of computational biology and drug design | 2012 | 298-313 | 23013655 |
| Small RNA and its application in andrology and urology. | Wang, Ji; Li, Long-Cheng | Translational andrology and urology | 2012 | 33-43 | 23002430 |
| The mouse lymph node as an ectopic transplantation site for multiple tissues. | Komori, Junji; Boone, Lindsey; DeWard, Aaron; Hoppo, Toshitaka; Lagasse, Eric | Nature biotechnology | 2012 Oct | 976-83 | 23000933 |
| Neuronal Elav-like (Hu) proteins regulate RNA splicing and abundance to control glutamate levels and neuronal excitability. | Ince-Dunn, Gulayse; Okano, Hirotaka J; Jensen, Kirk B; Park, Woong-Yang; Zhong, Ru; Ule, Jernej; Mele, Aldo; Fak, John J; Yang, Chingwen; Zhang, Chaolin; Yoo, Jong; Herre, Margaret; Okano, Hideyuki; Noebels, Jeffrey L; Darnell, Robert B | Neuron. | 2012 Sep 20; | 22998874 | |
| Staphylococcus aureus persisters tolerant to bactericidal antibiotics. | Lechner, Sabrina; Lewis, Kim; Bertram, Ralph | Journal of molecular microbiology and biotechnology | 2012 | 235-44 | 22986269 |
| In vivo imaging of tracheal epithelial cells in mice during airway regeneration. | Kim, Jun Ki; Vinarsky, Vladimir; Wain, John; Zhao, Rui; Jung, Keehoon; Choi, Jinwoo; Lam, Adam; Pardo-Saganta, Ana; Breton, Sylvie; Rajagopal, Jayaraj; Yun, Seok Hyun | American journal of respiratory cell and molecular biology | 2012 Dec | 864-8 | 22984086 |
| WATER, ENERGY AND LIFE: FRESH VIEWS FROM THE WATER'S EDGE. | Pollack, G H | International journal of design & nature and ecodynamics : a transdisciplinary journal relating to nature, science and the humanities | 2010 Dec 3 | 27-29 | 22977460 |
| Cellular reprogramming: a small molecule perspective. | Nie, Baoming; Wang, Haixia; Laurent, Timothy; Ding, Sheng | Current opinion in cell biology | 2012 Dec | 784-92 | 22959962 |
| Transposable elements in TDP-43-mediated neurodegenerative disorders. | Li, Wanhe; Jin, Ying; Prazak, Lisa; Hammell, Molly; Dubnau, Josh | PloS one | 2012 | e44099 | 22957047 |
| Measurement and modeling of signaling at the single-cell level. | Kolitz, Sarah E; Lauffenburger, Douglas A | Biochemistry | 2012 Sep 25 | 7433-43 | 22954137 |
| Adapting enzyme-free DNA circuits to the detection of loop-mediated isothermal amplification reactions. | Li, Bingling; Chen, Xi; Ellington, Andrew D | Analytical chemistry | 2012 Oct 2 | 8371-7 | 22947054 |
| What's in a name generator? Choosing the right name generators for social network surveys in healthcare quality and safety research. | Burt, Ronald S; Meltzer, David O; Seid, Michael; Borgert, Amy; Chung, Jeanette W; Colletti, Richard B; Dellal, George; Kahn, Stacy A; Kaplan, Heather C; Peterson, Laura E; Margolis, Peter | BMJ quality & safety | 2012 Dec | 992-1000 | 22942400 |
| Intraoperative near-infrared imaging of surgical wounds after tumor resections can detect residual disease. | Madajewski, Brian; Judy, Brendan F; Mouchli, Anas; Kapoor, Veena; Holt, David; Wang, May D; Nie, Shuming; Singhal, Sunil | Clinical cancer research : an official journal of the American Association for Cancer Research | 2012 Oct 15 | 5741-51 | 22932668 |
| Infectious diseases in children and body mass index in young adults. | Suh, Gina; Ley, Catherine; Parsonnet, Julie | Emerging infectious diseases | 2012 Sep | 1490-2 | 22932124 |
| Neuron-specific deletion of peroxisome proliferator-activated receptor delta (PPARýý) in mice leads to increased susceptibility to diet-induced obesity. | Kocalis, Heidi E; Turney, Maxine K; Printz, Richard L; Laryea, Gloria N; Muglia, Louis J; Davies, Sean S; Stanwood, Gregg D; McGuinness, Owen P; Niswender, Kevin D | PloS one | 2012 | e42981 | 22916190 |
| Antibiotics in early life alter the murine colonic microbiome and adiposity. | Cho, Ilseung; Yamanishi, Shingo; Cox, Laura; Methe, Barbara A; Zavadil, Jiri; Li, Kelvin; Gao, Zhan; Mahana, Douglas; Raju, Kartik; Teitler, Isabel; Li, Huilin; Alekseyenko, Alexander V; Blaser, Martin J | Nature | 2012 Aug 30 | 621-6 | 22914093 |
| Genome-wide identification of Pseudomonas aeruginosa virulence-related genes using a Caenorhabditis elegans infection model. | Feinbaum, Rhonda L; Urbach, Jonathan M; Liberati, Nicole T; Djonovic, Slavica; Adonizio, Allison; Carvunis, Anne-Ruxandra; Ausubel, Frederick M | PLoS pathogens | 2012 | e1002813 | 22911607 |
| Targeted p21WAF1/CIP1 activation by RNAa inhibits hepatocellular carcinoma cells. | Kosaka, Mika; Kang, Moo Rim; Yang, Glen; Li, Long-Cheng | Nucleic acid therapeutics | 2012 Oct | 335-43 | 22909100 |
| Rapid development of a potent photo-triggered inhibitor of the serine hydrolase RBBP9. | Liu, Xiaodan; Dix, Melissa; Speers, Anna E; Bachovchin, Daniel A; Zuhl, Andrea M; Cravatt, Benjamin F; Kodadek, Thomas J | Chembiochem : a European journal of chemical biology | 2012 Sep 24 | 2082-93 | 22907802 |
| Infant antibiotic exposures and early-life body mass. | Trasande, L; Blustein, J; Liu, M; Corwin, E; Cox, L M; Blaser, M J | International journal of obesity (2005) | 2013 Jan | 16-23 | 22907693 |
| Multicolored stain-free histopathology with coherent Raman imaging. | Freudiger, Christian W; Pfannl, Rolf; Orringer, Daniel A; Saar, Brian G; Ji, Minbiao; Zeng, Qing; Ottoboni, Linda; Wei, Ying; Ying, Wei; Waeber, Christian; Sims, John R; De Jager, Philip L; Sagher, Oren; Philbert, Martin A; Xu, Xiaoyin; Kesari, Santosh; X | Laboratory investigation; a journal of technical methods and pathology | 2012 Oct | 1492-502 | 22906986 |
| Dissecting neural function using targeted genome engineering technologies. | Hsu, Patrick D; Zhang, Feng | ACS chemical neuroscience | 2012 Aug 15 | 603-10 | 22896804 |
| Adventures in neurobioengineering. | Jasanoff, Alan | ACS chemical neuroscience | 2012 Aug 15 | 575 | 22896800 |
| Distinct cutaneous bacterial assemblages in a sampling of South American Amerindians and US residents. | Blaser, Martin J; Dominguez-Bello, Maria G; Contreras, Monica; Magris, Magda; Hidalgo, Glida; Estrada, Isidoro; Gao, Zhan; Clemente, Jose C; Costello, Elizabeth K; Knight, Rob | The ISME journal | 2013 Jan | 85-95 | 22895161 |
| Probing spatial organization of DNA strands using enzyme-free hairpin assembly circuits. | Li, Bingling; Jiang, Yu; Chen, Xi; Ellington, Andrew D | Journal of the American Chemical Society | 2012 Aug 29 | 13918-21 | 22894754 |
| Period determination in the food-entrainable and methamphetamine-sensitive circadian oscillator(s). | Pendergast, Julie S; Oda, Gisele A; Niswender, Kevin D; Yamazaki, Shin | Proceedings of the National Academy of Sciences of the United States of America | 2012 Aug 28 | 14218-23 | 22891330 |
| Cell surface assembly of HIV gp41 six-helix bundles for facile, quantitative measurements of hetero-oligomeric interactions. | Hu, Xuebo; Saha, Piyali; Chen, Xiaoyue; Kim, Dogeun; Devarasetty, Mahesh; Varadarajan, Raghavan; Jin, Moonsoo M | Journal of the American Chemical Society | 2012 Sep 12 | 14642-5 | 22888993 |
| Affinity maturation of single-domain antibodies by yeast surface display. | Koide, Akiko; Koide, Shohei | Methods in molecular biology (Clifton, N.J.) | 2012 | 431-43 | 22886267 |
| Resolvin E1 inhibits neuropathic pain and spinal cord microglial activation following peripheral nerve injury. | Xu, Zhen-Zhong; Berta, Temugin; Ji, Ru-Rong | Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology | 2013 Mar | 37-41 | 22878925 |
| Insights into proteomic immune cell signaling and communication via data-driven modeling. | Benedict, Kelly F; Lauffenburger, Douglas A | Current topics in microbiology and immunology | 2013 | 201-33 | 22878785 |
| Complement factor H genotypes impact risk of age-related macular degeneration by interaction with oxidized phospholipids. | Shaw, Peter X; Zhang, Li; Zhang, Ming; Du, Hongjun; Zhao, Ling; Lee, Clara; Grob, Seanna; Lim, Siok Lam; Hughes, Guy; Lee, Janet; Bedell, Matthew; Nelson, Mark H; Lu, Fang; Krupa, Martin; Luo, Jing; Ouyang, Hong; Tu, Zhidan; Su, Zhiguang; Zhu, Jin; Wei, X | Proceedings of the National Academy of Sciences of the United States of America | 2012 Aug 21 | 13757-62 | 22875704 |
| The many roads to Rome: induction of neural precursor cells from fibroblasts. | Lujan, Ernesto; Wernig, Marius | Current opinion in genetics & development | 2012 Oct | 517-22 | 22868177 |
| Acute mechanical forces cause deterioration in lung structure and function in elastase-induced emphysema. | Szabari, M V; Parameswaran, H; Sato, S; Hantos, Z; Bartolak-Suki, E; Suki, B | American journal of physiology. Lung cellular and molecular physiology | 2012 Oct 1 | L567-74 | 22865550 |
| Human endogenous retrovirus K Gag coassembles with HIV-1 Gag and reduces the release efficiency and infectivity of HIV-1. | Monde, Kazuaki; Contreras-Galindo, Rafael; Kaplan, Mark H; Markovitz, David M; Ono, Akira | Journal of virology | 2012 Oct | 11194-208 | 22855497 |
| Optimizing therapy for argininosuccinic aciduria. | Nagamani, Sandesh C S; Lee, Brendan; Erez, Ayelet | Molecular genetics and metabolism | 2012 Sep | 10-4 | 22841516 |
| Comprehensive interrogation of natural TALE DNA-binding modules and transcriptional repressor domains. | Cong, Le; Zhou, Ruhong; Kuo, Yu-Chi; Cunniff, Margaret; Zhang, Feng | Nature communications | 2012 | 968 | 22828628 |
| Humanin prevents intra-renal microvascular remodeling and inflammation in hypercholesterolemic ApoE deficient mice. | Zhang, Xin; Urbieta-Caceres, Victor H; Eirin, Alfonso; Bell, Caitlin C; Crane, John A; Tang, Hui; Jordan, Kyra L; Oh, Yun-Kyu; Zhu, Xiang-Yang; Korsmo, Michael J; Bachar, Adi R; Cohen, Pinchas; Lerman, Amir; Lerman, Lilach O | Life sciences | 2012 Sep 4 | 199-206 | 22820173 |
| Variable ventilation enhances ventilation without exacerbating injury in preterm lambs with respiratory distress syndrome. | Berry, Clare A; Suki, Bela; Polglase, Graeme R; Pillow, J Jane | Pediatric research | 2012 Oct | 384-92 | 22805999 |
| Molecular architecture and assembly principles of Vibrio cholerae biofilms. | Berk, Veysel; Fong, Jiunn C N; Dempsey, Graham T; Develioglu, Omer N; Zhuang, Xiaowei; Liphardt, Jan; Yildiz, Fitnat H; Chu, Steven | Science (New York, N.Y.) | 2012 Jul 13 | 236-9 | 22798614 |
| Single-molecule analysis of translational dynamics. | Petrov, Alexey; Chen, Jin; O'Leary, Sean; Tsai, Albert; Puglisi, Joseph D | Cold Spring Harbor perspectives in biology | 2012 Sep | a011551 | 22798542 |
| P53 is required for the developmental restriction in Muller glial proliferation in mouse retina. | Ueki, Yumi; Karl, Mike O; Sudar, Samuel; Pollak, Julia; Taylor, Russell J; Loeffler, Kati; Wilken, Matthew S; Reardon, Sara; Reh, Thomas A | Glia | 2012 Oct | 1579-89 | 22777914 |
| Role of oxidative stress in persister tolerance. | Wu, Yanxia; Vulic, Marin; Keren, Iris; Lewis, Kim | Antimicrobial agents and chemotherapy | 2012 Sep | 4922-6 | 22777047 |
| Robust tumor immunity to melanoma mediated by interleukin-9-producing T cells. | Purwar, Rahul; Schlapbach, Christoph; Xiao, Sheng; Kang, Hong Soon; Elyaman, Wassim; Jiang, Xiaodong; Jetten, Anton M; Khoury, Samia J; Fuhlbrigge, Robert C; Kuchroo, Vijay K; Clark, Rachael A; Kupper, Thomas S | Nature medicine | 2012 Jul 8 | NULL | 22772464 |
| The bicyclic intermediate structure provides insights into the desuccinylation mechanism of human sirtuin 5 (SIRT5). | Zhou, Yeyun; Zhang, Hongmin; He, Bin; Du, Jintang; Lin, Hening; Cerione, Richard A; Hao, Quan | The Journal of biological chemistry | 2012 Aug 17 | 28307-14 | 22767592 |
| Growth phase-dependent control of transcription start site selection and gene expression by nanoRNAs. | Vvedenskaya, Irina O; Sharp, Josh S; Goldman, Seth R; Kanabar, Pinal N; Livny, Jonathan; Dove, Simon L; Nickels, Bryce E | Genes & development | 2012 Jul 1 | 1498-507 | 22751503 |
| Rapid casting of patterned vascular networks for perfusable engineered three-dimensional tissues. | Miller, Jordan S; Stevens, Kelly R; Yang, Michael T; Baker, Brendon M; Nguyen, Duc-Huy T; Cohen, Daniel M; Toro, Esteban; Chen, Alice A; Galie, Peter A; Yu, Xiang; Chaturvedi, Ritika; Bhatia, Sangeeta N; Chen, Christopher S | Nature materials | 2012 Sep | 768-74 | 22751181 |
| Structural insights for engineering binding proteins based on non-antibody scaffolds. | Gilbreth, Ryan N; Koide, Shohei | Current opinion in structural biology | 2012 Aug | 413-20 | 22749196 |
| Orally active adenosine A(1) receptor agonists with antinociceptive effects in mice. | Korboukh, Ilia; Hull-Ryde, Emily A; Rittiner, Joseph E; Randhawa, Amarjit S; Coleman, Jennifer; Fitzpatrick, Brendan J; Setola, Vincent; Janzen, William P; Frye, Stephen V; Zylka, Mark J; Jin, Jian | Journal of medicinal chemistry | 2012 Jul 26 | 6467-77 | 22738238 |
| Base-pair resolution DNA methylation sequencing reveals profoundly divergent epigenetic landscapes in acute myeloid leukemia. | Akalin, Altuna; Garrett-Bakelman, Francine E; Kormaksson, Matthias; Busuttil, Jennifer; Zhang, Lu; Khrebtukova, Irina; Milne, Thomas A; Huang, Yongsheng; Biswas, Debabrata; Hess, Jay L; Allis, C David; Roeder, Robert G; Valk, Peter J M; Lowenberg, Bob; De | PLoS genetics | 2012 | e1002781 | 22737091 |
| A Cleavable Scaffold Strategy for the Synthesis of One-Bead One-Compound Cyclic Peptoid Libraries That Can Be Sequenced By Tandem Mass Spectrometry. | Simpson, Levi S; Kodadek, Thomas | Tetrahedron letters | 2012 May 2 | 2341-2344 | 22736872 |
| Multifunctional materials through modular protein engineering. | DiMarco, Rebecca L; Heilshorn, Sarah C | Advanced materials (Deerfield Beach, Fla.) | 2012 Aug 2 | 3923-40 | 22730248 |
| DNA circuits as amplifiers for the detection of nucleic acids on a paperfluidic platform. | Allen, Peter B; Arshad, Seyed A; Li, Bingling; Chen, Xi; Ellington, Andrew D | Lab on a chip | 2012 Aug 21 | 2951-8 | 22729075 |
| Persister-promoting bacterial toxin TisB produces anion-selective pores in planar lipid bilayers. | Gurnev, Philip A; Ortenberg, Ron; Dorr, Tobias; Lewis, Kim; Bezrukov, Sergey M | FEBS letters | 2012 Jul 30 | 2529-34 | 22728134 |
| Subcortical neuronal ensembles: an analysis of motor task association, tremor, oscillations, and synchrony in human patients. | Hanson, Timothy L; Fuller, Andrew M; Lebedev, Mikhail A; Turner, Dennis A; Nicolelis, Miguel A L | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2012 Jun 20 | 8620-32 | 22723703 |
| Heterogeneous pathways and timing of factor departure during translation initiation. | Tsai, Albert; Petrov, Alexey; Marshall, R Andrew; Korlach, Jonas; Uemura, Sotaro; Puglisi, Joseph D | Nature. | 2012 Jul 19; | 390-3 | 22722848 |
| Regulation of the Escherichia coli HipBA toxin-antitoxin system by proteolysis. | Hansen, Sonja; Vulic, Marin; Min, Jungki; Yen, Tien-Jui; Schumacher, Maria A; Brennan, Richard G; Lewis, Kim | PloS one | 2012 | e39185 | 22720069 |
| Stimulation of host immune defenses by a small molecule protects C. elegans from bacterial infection. | Pukkila-Worley, Read; Feinbaum, Rhonda; Kirienko, Natalia V; Larkins-Ford, Jonah; Conery, Annie L; Ausubel, Frederick M | PLoS genetics | 2012 | e1002733 | 22719261 |
| Nitric oxide-producing myeloid-derived suppressor cells inhibit vascular E-selectin expression in human squamous cell carcinomas. | Gehad, Ahmed E; Lichtman, Michael K; Schmults, Chrysalyne D; Teague, Jessica E; Calarese, Adam W; Jiang, Ying; Watanabe, Rei; Clark, Rachael A | The Journal of investigative dermatology | 2012 Nov | 2642-51 | 22718118 |
| Antiepileptic drugs and pregnancy outcomes. | Wlodarczyk, Bogdan J; Palacios, Ana M; George, Timothy M; Finnell, Richard H | American journal of medical genetics. Part A | 2012 Aug | 2071-90 | 22711424 |
| Monitoring the temporal changes of respiratory resistance: a novel test for the management of asthma. | Gulotta, Carlo; Suki, Bela; Brusasco, Vito; Pellegrino, Riccardo; Gobbi, Alessandro; Pedotti, Antonio; Dellaca, Raffaele L | American journal of respiratory and critical care medicine | 2012 Jun 15 | 1330-1 | 22707741 |
| Biological synthesis of circular polypeptides. | Aboye, Teshome L; Camarero, Julio A | The Journal of biological chemistry | 2012 Aug 3 | 27026-32 | 22707722 |
| Statistical deconvolution for superresolution fluorescence microscopy. | Mukamel, Eran A; Babcock, Hazen; Zhuang, Xiaowei | Biophysical journal | 2012 May 16 | 2391-400 | 22677393 |
| Fully functionalized small-molecule probes for integrated phenotypic screening and target identification. | Cisar, Justin S; Cravatt, Benjamin F | Journal of the American Chemical Society | 2012 Jun 27 | 10385-8 | 22667687 |
| Computational genetic discoveries that could improve perioperative medicine. | Zheng, Ming; Dill, David; Clark, J David; Peltz, Gary | Current opinion in anaesthesiology | 2012 Aug | 428-33 | 22647490 |
| Redefining differentiation: Reshaping our ends. | Blau, Helen M | Nature cell biology | 2012 Jun | 558 | 22643873 |
| Virus-like particle-induced protection against MRSA pneumonia is dependent on IL-13 and enhancement of phagocyte function. | Rynda-Apple, Agnieszka; Dobrinen, Erin; McAlpine, Mark; Read, Amanda; Harmsen, Ann; Richert, Laura E; Calverley, Matthew; Pallister, Kyler; Voyich, Jovanka; Wiley, James A; Johnson, Ben; Young, Mark; Douglas, Trevor; Harmsen, Allen G | The American journal of pathology. | 2012 Jul; | 22642909 | |
| Signaling defects in iPSC-derived fragile X premutation neurons. | Liu, Jing; Koscielska, Katarzyna A; Cao, Zhengyu; Hulsizer, Susan; Grace, Natalie; Mitchell, Gaela; Nacey, Catherine; Githinji, Jackline; McGee, Jeannine; Garcia-Arocena, Dolores; Hagerman, Randi J; Nolta, Jan; Pessah, Isaac N; Hagerman, Paul J | Human molecular genetics | 2012 Sep 1 | 3795-805 | 22641815 |
| Influence of water on the work function of certain metals. | Musumeci, Francesco; Pollack, Gerald H | Chemical physics letters | 2012 May 21 | 65-67 | 22639466 |
| Antibiotics: Recover the lost art of drug discovery. | Lewis, Kim | Nature | 2012 May 24 | 439-40 | 22622552 |
| Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons. | Meyer, Kate D; Saletore, Yogesh; Zumbo, Paul; Elemento, Olivier; Mason, Christopher E; Jaffrey, Samie R | Cell | 2012 Jun 22 | 1635-46 | 22608085 |
| Expression of human endogenous retrovirus type K (HML-2) is activated by the Tat protein of HIV-1. | Gonzalez-Hernandez, Marta J; Swanson, Michael D; Contreras-Galindo, Rafael; Cookinham, Sarah; King, Steven R; Noel Jr, Richard J; Kaplan, Mark H; Markovitz, David M | Journal of virology | 2012 Aug | 7790-805 | 22593154 |
| Somatic STAT3 mutations in large granular lymphocytic leukemia. | Koskela, Hanna L M; Eldfors, Samuli; Ellonen, Pekka; van Adrichem, Arjan J; Kuusanmaki, Heikki; Andersson, Emma I; Lagstrom, Sonja; Clemente, Michael J; Olson, Thomas; Jalkanen, Sari E; Majumder, Muntasir Mamun; Almusa, Henrikki; Edgren, Henrik; Lepisto, | The New England journal of medicine | 2012 May 17 | 1905-13 | 22591296 |
| Protein lysine acylation and cysteine succination by intermediates of energy metabolism. | Lin, Hening; Su, Xiaoyang; He, Bin | ACS chemical biology | 2012 Jun 15 | 947-60 | 22571489 |
| Development of humanized mouse models to study human malaria parasite infection. | Vaughan, Ashley M; Kappe, Stefan H I; Ploss, Alexander; Mikolajczak, Sebastian A | Future microbiology | 2012 May | 657-65 | 22568719 |
| TLR3 deficiency impairs spinal cord synaptic transmission, central sensitization, and pruritus in mice. | Liu, Tong; Berta, Temugin; Xu, Zhen-Zhong; Park, Chul-Kyu; Zhang, Ling; Lu, Ning; Liu, Qin; Liu, Yang; Gao, Yong-Jing; Liu, Yen-Chin; Ma, Qiufu; Dong, Xinzhong; Ji, Ru-Rong | The Journal of clinical investigation | 2012 Jun 1 | 2195-207 | 22565312 |
| CGRPýý-expressing sensory neurons respond to stimuli that evoke sensations of pain and itch. | McCoy, Eric S; Taylor-Blake, Bonnie; Zylka, Mark J | PloS one | 2012 | e36355 | 22563493 |
| Human epidermal Langerhans cells maintain immune homeostasis in skin by activating skin resident regulatory T cells. | Seneschal, Julien; Clark, Rachael A; Gehad, Ahmed; Baecher-Allan, Clare M; Kupper, Thomas S | Immunity | 2012 May 25 | 873-84 | 22560445 |
| Nitric-oxide supplementation for treatment of long-term complications in argininosuccinic aciduria. | Nagamani, Sandesh C S; Campeau, Philippe M; Shchelochkov, Oleg A; Premkumar, Muralidhar H; Guse, Kilian; Brunetti-Pierri, Nicola; Chen, Yuqing; Sun, Qin; Tang, Yaoping; Palmer, Donna; Reddy, Anilkumar K; Li, Li; Slesnick, Timothy C; Feig, Daniel I; Caudle | American journal of human genetics | 2012 May 4 | 836-46 | 22541557 |
| PAPupuncture has localized and long-lasting antinociceptive effects in mouse models of acute and chronic pain. | Hurt, Julie K; Zylka, Mark J | Molecular pain | 2012 | 28 | 22524543 |
| An image analysis toolbox for high-throughput C. elegans assays. | Wahlby, Carolina; Kamentsky, Lee; Liu, Zihan H; Riklin-Raviv, Tammy; Conery, Annie L; O'Rourke, Eyleen J; Sokolnicki, Katherine L; Visvikis, Orane; Ljosa, Vebjorn; Irazoqui, Javier E; Golland, Polina; Ruvkun, Gary; Ausubel, Frederick M; Carpenter, Anne E | Nature methods | 2012 Jul | 714-6 | 22522656 |
| Host translational inhibition by Pseudomonas aeruginosa Exotoxin A Triggers an immune response in Caenorhabditis elegans. | McEwan, Deborah L; Kirienko, Natalia V; Ausubel, Frederick M | Cell host & microbe | 2012 Apr 19 | 364-74 | 22520464 |
| The impact of Helicobacter pylori on atopic disorders in childhood. | Holster, I Lisanne; Vila, Anne Marie J; Caudri, Daan; den Hoed, Caroline M; Perez-Perez, Guillermo I; Blaser, Martin J; de Jongste, Johan C; Kuipers, Ernst J | Helicobacter | 2012 Jun | 232-7 | 22515362 |
| MicroRNA profiling: approaches and considerations. | Pritchard, Colin C; Cheng, Heather H; Tewari, Muneesh | Nature reviews. Genetics | 2012 May | 358-69 | 22510765 |
| Concentration- and stage-specific effects of nitrite on colon cancer cell lines. | Jiang, Hong; Tang, Yaoping; Garg, Harsha K; Parthasarathy, Deepa K; Torregrossa, Ashley C; Hord, Norman G; Bryan, Nathan S | Nitric oxide : biology and chemistry / official journal of the Nitric Oxide Society | 2012 May 15 | 267-73 | 22504070 |
| Microfluidic single-cell real-time PCR for comparative analysis of gene expression patterns. | Sanchez-Freire, Veronica; Ebert, Antje D; Kalisky, Tomer; Quake, Stephen R; Wu, Joseph C | Nature protocols | 2012 May | 829-38 | 22481529 |
| Oxidative stress induces itch via activation of transient receptor potential subtype ankyrin 1 in mice. | Liu, Tong; Ji, Ru-Rong | Neuroscience bulletin | 2012 Apr | 145-54 | 22466125 |
| Emerging role of Toll-like receptors in the control of pain and itch. | Liu, Tong; Gao, Yong-Jing; Ji, Ru-Rong | Neuroscience bulletin | 2012 Apr | 131-44 | 22466124 |
| Exendin-4 decreases amphetamine-induced locomotor activity. | Erreger, Kevin; Davis, Adeola R; Poe, Amanda M; Greig, Nigel H; Stanwood, Gregg D; Galli, Aurelio | Physiology & behavior | 2012 Jun 25 | 574-8 | 22465309 |
| Cd14 SNPs regulate the innate immune response. | Liu, Hong-Hsing; Hu, Yajing; Zheng, Ming; Suhoski, Megan M; Engleman, Edgar G; Dill, David L; Hudnall, Matt; Wang, Jianmei; Spolski, Rosanne; Leonard, Warren J; Peltz, Gary | Molecular immunology | 2012 Jun | 112-27 | 22445606 |
| Low copy expression vectors for use in Yersinia sp. and related organisms. | Obrist, Markus W; Miller, Virginia L | Plasmid | 2012 Jul | 33-42 | 22445322 |
| Acute morphine induces matrix metalloproteinase-9 up-regulation in primary sensory neurons to mask opioid-induced analgesia in mice. | Liu, Yen-Chin; Berta, Temugin; Liu, Tong; Tan, Ping-Heng; Ji, Ru-Rong | Molecular pain | 2012 | 19 | 22444868 |
| Measurements and implications of the membrane dipole potential. | Wang, Liguo | Annual review of biochemistry. | 2012; | 22443933 | |
| Selected approaches for increasing HIV DNA vaccine immunogenicity in vivo. | Hutnick, Natalie A; Myles, Devin J F; Bian, Chaoran Billie; Muthumani, Karuppiah; Weiner, David B | Current opinion in virology | 2011 Oct | 233-40 | 22440782 |
| Acute morphine activates satellite glial cells and up-regulates IL-1ýý in dorsal root ganglia in mice via matrix metalloprotease-9. | Berta, Temugin; Liu, Tong; Liu, Yen-Chin; Xu, Zhen-Zhong; Ji, Ru-Rong | Molecular pain | 2012 | 18 | 22439811 |
| Nonfluorescent quenchers to correlate single-molecule conformational and compositional dynamics. | Chen, Jin; Tsai, Albert; Petrov, Alexey; Puglisi, Joseph D | Journal of the American Chemical Society. | 2012 Apr 4; | 22428667 | |
| Association between gastric Helicobacter pylori colonization and glycated hemoglobin levels. | Chen, Yu; Blaser, Martin J | The Journal of infectious diseases | 2012 Apr 15 | 1195-202 | 22427676 |
| A recurrent neural network for closed-loop intracortical brain-machine interface decoders. | Sussillo, David; Nuyujukian, Paul; Fan, Joline M; Kao, Jonathan C; Stavisky, Sergey D; Ryu, Stephen; Shenoy, Krishna | Journal of neural engineering | 2012 Apr | 026027 | 22427488 |
| Efficient one-pot cyclization/folding of Rhesus ýý-defensin-1 (RTD-1). | Aboye, Teshome L; Li, Yilong; Majumder, Subhabrata; Hao, Jinfeng; Shekhtman, Alexander; Camarero, Julio A | Bioorganic & medicinal chemistry letters | 2012 Apr 15 | 2823-6 | 22425570 |
| Improved outcomes in a quality improvement collaborative for pediatric inflammatory bowel disease. | Crandall, Wallace V; Margolis, Peter A; Kappelman, Michael D; King, Eileen C; Pratt, Jesse M; Boyle, Brendan M; Duffy, Lynn F; Grunow, John E; Kim, Sandra C; Leibowitz, Ian; Schoen, Bess T; Colletti, Richard B; ImproveCareNow Collaborative | Pediatrics | 2012 Apr | e1030-41 | 22412030 |
| The human microbiome: at the interface of health and disease. | Cho, Ilseung; Blaser, Martin J | Nature reviews. Genetics | 2012 Apr | 260-70 | 22411464 |
| Tyrosine-mutant AAV8 delivery of human MERTK provides long-term retinal preservation in RCS rats. | Deng, Wen-Tao; Dinculescu, Astra; Li, Qiuhong; Boye, Sanford L; Li, Jie; Gorbatyuk, Marina S; Pang, Jijing; Chiodo, Vince A; Matthes, Michael T; Yasumura, Douglas; Liu, Li; Alkuraya, Fowzan S; Zhang, Kang; Vollrath, Douglas; LaVail, Matthew M; Hauswirth, | Investigative ophthalmology & visual science | 2012 Apr | 1895-904 | 22408006 |
| In-cell fluorescence activation and labeling of proteins mediated by FRET-quenched split inteins. | Borra, Radhika; Dong, Dezheng; Elnagar, Ahmed Y; Woldemariam, Getachew A; Camarero, Julio A | Journal of the American Chemical Society | 2012 Apr 11 | 6344-53 | 22404648 |
| Fluorescence imaging of cellular metabolites with RNA. | Paige, Jeremy S; Nguyen-Duc, Thinh; Song, Wenjiao; Jaffrey, Samie R | Science (New York, N.Y.) | 2012 Mar 9 | 1194 | 22403384 |
| Competitive activity-based protein profiling identifies aza-ýý-lactams as a versatile chemotype for serine hydrolase inhibition. | Zuhl, Andrea M; Mohr, Justin T; Bachovchin, Daniel A; Niessen, Sherry; Hsu, Ku-Lung; Berlin, Jacob M; Dochnahl, Maximilian; Lopez-Alberca, Maria P; Fu, Gregory C; Cravatt, Benjamin F | Journal of the American Chemical Society | 2012 Mar 21 | 5068-71 | 22400490 |
| Secretion and N-linked glycosylation are required for prostatic acid phosphatase catalytic and antinociceptive activity. | Hurt, Julie K; Fitzpatrick, Brendan J; Norris-Drouin, Jacqueline; Zylka, Mark J | PloS one | 2012 | e32741 | 22389722 |
| EFFECT OF PARTICLE DIAMETER ON EXCLUSION-ZONE SIZE. | Nhan, D T; Pollack, G H | International journal of design & nature and ecodynamics : a transdisciplinary journal relating to nature, science and the humanities | 2011 Jun 2 | 139-144 | 22389653 |
| Skin infection generates non-migratory memory CD8+ T(RM) cells providing global skin immunity. | Jiang, Xiaodong; Clark, Rachael A; Liu, Luzheng; Wagers, Amy J; Fuhlbrigge, Robert C; Kupper, Thomas S | Nature | 2012 Mar 8 | 227-31 | 22388819 |
| Galectin-1 inhibits the viability, proliferation, and Th1 cytokine production of nonmalignant T cells in patients with leukemic cutaneous T-cell lymphoma. | Cedeno-Laurent, Filiberto; Watanabe, Rei; Teague, Jessica E; Kupper, Thomas S; Clark, Rachael A; Dimitroff, Charles J | Blood | 2012 Apr 12 | 3534-8 | 22383798 |
| G Protein-regulated inducer of neurite outgrowth (GRIN) modulates Sprouty protein repression of mitogen-activated protein kinase (MAPK) activation by growth factor stimulation. | Hwangpo, Tracy Anh; Jordan, J Dedrick; Premsrirut, Prem K; Jayamaran, Gomathi; Licht, Jonathan D; Iyengar, Ravi; Neves, Susana R | The Journal of biological chemistry | 2012 Apr 20 | 13674-85 | 22383529 |
| Label-free live-cell imaging of nucleic acids using stimulated Raman scattering microscopy. | Zhang, Xu; Roeffaers, Maarten B J; Basu, Srinjan; Daniele, Joseph R; Fu, Dan; Freudiger, Christian W; Holtom, Gary R; Xie, X Sunney | Chemphyschem : a European journal of chemical physics and physical chemistry | 2012 Mar | 1054-9 | 22368112 |
| Induction of NANOG expression by targeting promoter sequence with small activating RNA antagonizes retinoic acid-induced differentiation. | Wang, Xiaoling; Wang, Ji; Huang, Vera; Place, Robert F; Li, Long-Cheng | The Biochemical journal | 2012 May 1 | 821-8 | 22339500 |
| miRNA goes nuclear. | Huang, Vera; Li, Long-Cheng | RNA biology | 2012 Mar | 269-73 | 22336708 |
| Moving beyond "good fat, bad fat": the complex roles of dietary lipids in cellular function and health: session abstracts. | Abumrad, Nada A; Piomelli, Daniele; Yurko-Mauro, Karin; Merrill, Alfred; Clandinin, M Tom; Serhan, Charles N | Advances in nutrition (Bethesda, Md.) | 2012 Jan | 60-8 | 22332103 |
| Humanin, a cytoprotective peptide, is expressed in carotid atherosclerotic [corrected] plaques in humans. | Zacharias, David G; Kim, Sung Gyun; Massat, Alfonso Eirin; Bachar, Adi R; Oh, Yun K; Herrmann, Joerg; Rodriguez-Porcel, Martin; Cohen, Pinchas; Lerman, Lilach O; Lerman, Amir | PloS one | 2012 | e31065 | 22328926 |
| Recombinant production of rhesus ýý-defensin-1 (RTD-1) using a bacterial expression system. | Gould, Andrew; Li, Yilong; Majumder, Subhabrata; Garcia, Angie E; Carlsson, Patrick; Shekhtman, Alexander; Camarero, Julio A | Molecular bioSystems | 2012 Apr | 1359-65 | 22327102 |
| Incorporation of heterocycles into the backbone of peptoids to generate diverse peptoid-inspired one bead one compound libraries. | Aditya, Animesh; Kodadek, Thomas | ACS combinatorial science | 2012 Mar 12 | 164-9 | 22320121 |
| Disruption of TNF-ýý/TNFR1 function in resident skin cells impairs host immune response against cutaneous vaccinia virus infection. | Tian, Tian; Dubin, Krista; Jin, Qiushuang; Qureshi, Ali; King, Sandra L; Liu, Luzheng; Jiang, Xiaodong; Murphy, George F; Kupper, Thomas S; Fuhlbrigge, Robert C | The Journal of investigative dermatology | 2012 May | 1425-34 | 22318381 |
| Quantitative chemical imaging with multiplex stimulated Raman scattering microscopy. | Fu, Dan; Lu, Fa-Ke; Zhang, Xu; Freudiger, Christian; Pernik, Douglas R; Holtom, Gary; Xie, Xiaoliang Sunney | Journal of the American Chemical Society | 2012 Feb 29 | 3623-6 | 22316340 |
| Modeling hepatitis C virus infection using human induced pluripotent stem cells. | Schwartz, Robert E; Trehan, Kartik; Andrus, Linda; Sheahan, Timothy P; Ploss, Alexander; Duncan, Stephen A; Rice, Charles M; Bhatia, Sangeeta N | Proceedings of the National Academy of Sciences of the United States of America | 2012 Feb 14 | 2544-8 | 22308485 |
| Direct conversion of mouse fibroblasts to self-renewing, tripotent neural precursor cells. | Lujan, Ernesto; Chanda, Soham; Ahlenius, Henrik; Sudhof, Thomas C; Wernig, Marius | Proceedings of the National Academy of Sciences of the United States of America | 2012 Feb 14 | 2527-32 | 22308465 |
| Short small-interfering RNAs produce interferon-ýý-mediated analgesia. | Tan, P H; Gao, Y J; Berta, T; Xu, Z Z; Ji, R R | British journal of anaesthesia | 2012 Apr | 662-9 | 22307241 |
| Directing mesenchymal stem cells to bone to augment bone formation and increase bone mass. | Guan, Min; Yao, Wei; Liu, Ruiwu; Lam, Kit S; Nolta, Jan; Jia, Junjing; Panganiban, Brian; Meng, Liping; Zhou, Ping; Shahnazari, Mohammad; Ritchie, Robert O; Lane, Nancy E | Nature medicine | 2012 Mar | 456-62 | 22306732 |
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| Novel strategy for selection of monoclonal antibodies against highly conserved antigens: phage library panning against ephrin-B2 displayed on yeast. | Gu, Xiaoling; Vedvyas, Yogindra; Chen, Xiaoyue; Kaushik, Tanwi; Hwang, Chang-Il; Hu, Xuebo; Nikitin, Alexander Y; Jin, Moonsoo M | PloS one | 2012 | e30680 | 22292016 |
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| Examination of mesenchymal stem cell-mediated RNAi transfer to Huntington's disease affected neuronal cells for reduction of huntingtin. | Olson, Scott D; Kambal, Amal; Pollock, Kari; Mitchell, Gaela-Marie; Stewart, Heather; Kalomoiris, Stefanos; Cary, Whitney; Nacey, Catherine; Pepper, Karen; Nolta, Jan A | Molecular and cellular neurosciences | 2012 Mar | 271-81 | 22198539 |
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| Role for mTOR signaling and neuronal activity in morphine-induced adaptations in ventral tegmental area dopamine neurons. | Mazei-Robison, Michelle S; Koo, Ja Wook; Friedman, Allyson K; Lansink, Carien S; Robison, Alfred J; Vinish, Monika; Krishnan, Vaishnav; Kim, Seyun; Siuta, Michael A; Galli, Aurelio; Niswender, Kevin D; Appasani, Raghu; Horvath, Monika C; Neve, Rachel L; W | Neuron | 2011 Dec 22 | 977-90 | 22196333 |
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| Topoisomerase inhibitors unsilence the dormant allele of Ube3a in neurons. | Huang, Hsien-Sung; Allen, John A; Mabb, Angela M; King, Ian F; Miriyala, Jayalakshmi; Taylor-Blake, Bonnie; Sciaky, Noah; Dutton Jr, J Walter; Lee, Hyeong-Min; Chen, Xin; Jin, Jian; Bridges, Arlene S; Zylka, Mark J; Roth, Bryan L; Philpot, Benjamin D | Nature | 2012 Jan 12 | 185-9 | 22190039 |
| Resolvin D2 is a potent endogenous inhibitor for transient receptor potential subtype V1/A1, inflammatory pain, and spinal cord synaptic plasticity in mice: distinct roles of resolvin D1, D2, and E1. | Park, Chul-Kyu; Xu, Zhen-Zhong; Liu, Tong; Lu, Ning; Serhan, Charles N; Ji, Ru-Rong | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2011 Dec 14 | 18433-8 | 22171045 |
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| Fully automated cellular-resolution vertebrate screening platform with parallel animal processing. | Chang, Tsung-Yao; Pardo-Martin, Carlos; Allalou, Amin; Wahlby, Carolina; Yanik, Mehmet Fatih | Lab on a chip | 2012 Feb 21 | 711-6 | 22159032 |
| Blood cell origin of circulating microRNAs: a cautionary note for cancer biomarker studies. | Pritchard, Colin C; Kroh, Evan; Wood, Brent; Arroyo, Jason D; Dougherty, Katy J; Miyaji, Melanie M; Tait, Jonathan F; Tewari, Muneesh | Cancer prevention research (Philadelphia, Pa.) | 2012 Mar | 492-7 | 22158052 |
| Expression of paramyxovirus V proteins promotes replication and spread of hepatitis C virus in cultures of primary human fetal liver cells. | Andrus, Linda; Marukian, Svetlana; Jones, Christopher T; Catanese, Maria Teresa; Sheahan, Timothy P; Schoggins, John W; Barry, Walter T; Dustin, Lynn B; Trehan, Kartik; Ploss, Alexander; Bhatia, Sangeeta N; Rice, Charles M | Hepatology (Baltimore, Md.) | 2011 Dec | 1901-12 | 22144107 |
| Reversible cell-cycle entry in adult kidney podocytes through regulated control of telomerase and Wnt signaling. | Shkreli, Marina; Sarin, Kavita Y; Pech, Matthew F; Papeta, Natalia; Chang, Woody; Brockman, Stephanie A; Cheung, Peggie; Lee, Eunice; Kuhnert, Frank; Olson, Jean L; Kuo, Calvin J; Gharavi, Ali G; D'Agati, Vivette D; Artandi, Steven E | Nature medicine | 2012 Jan | 111-9 | 22138751 |
| Some, but not all, retromer components promote morphogenesis of C. elegans sensory compartments. | Oikonomou, Grigorios; Perens, Elliot A; Lu, Yun; Shaham, Shai | Developmental biology | 2012 Feb 1 | 42-9 | 22138055 |
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| Expanding the rule set of DNA circuitry with associative toehold activation. | Chen, Xi | Journal of the American Chemical Society | 2012 Jan 11 | 263-71 | 22129141 |
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| Sustained axon regeneration induced by co-deletion of PTEN and SOCS3. | Sun, Fang; Park, Kevin K; Belin, Stephane; Wang, Dongqing; Lu, Tao; Chen, Gang; Zhang, Kang; Yeung, Cecil; Feng, Guoping; Yankner, Bruce A; He, Zhigang | Nature | 2011 Dec 15 | 372-5 | 22056987 |
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| High temperature requirement factor A1 (HTRA1) gene regulates angiogenesis through transforming growth factor-ýý family member growth differentiation factor 6. | Zhang, Li; Lim, Siok Lam; Du, Hongjun; Zhang, Ming; Kozak, Igor; Hannum, Gregory; Wang, Xiaolei; Ouyang, Hong; Hughes, Guy; Zhao, Ling; Zhu, Xuemei; Lee, Clara; Su, Zhiguang; Zhou, Xinrong; Shaw, Robert; Geum, Dongho; Wei, Xinran; Zhu, Jin; Ideker, Trey; | The Journal of biological chemistry | 2012 Jan 6 | 1520-6 | 22049084 |
| Biosynthesis and antimicrobial evaluation of backbone-cyclized ýý-defensins. | Garcia, Angie E; Tai, Kenneth P; Puttamadappa, Shadakshara S; Shekhtman, Alexander; Ouellette, Andre J; Camarero, Julio A | Biochemistry | 2011 Dec 6 | 10508-19 | 22040603 |
| Targeted delivery of cisplatin to lung cancer using ScFvEGFR-heparin-cisplatin nanoparticles. | Peng, Xiang-Hong; Wang, Yiqing; Huang, Donghai; Wang, Yuxiang; Shin, Hyung Juc; Chen, Zhengjia; Spewak, Michael B; Mao, Hui; Wang, Xu; Wang, Ying; Chen, Zhuo Georgia; Nie, Shuming; Shin, Dong M | ACS nano. | 2011 Dec 27; | 9480-93 | 22032622 |
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| PAP and NT5E inhibit nociceptive neurotransmission by rapidly hydrolyzing nucleotides to adenosine. | Street, Sarah E; Walsh, Paul L; Sowa, Nathaniel A; Taylor-Blake, Bonnie; Guillot, Thomas S; Vihko, Pirkko; Wightman, R Mark; Zylka, Mark J | Molecular pain | 2011 | 80 | 22011440 |
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| Pseudomonas aeruginosa RhlR is required to neutralize the cellular immune response in a Drosophila melanogaster oral infection model. | Limmer, Stefanie; Haller, Samantha; Drenkard, Eliana; Lee, Janice; Yu, Shen; Kocks, Christine; Ausubel, Frederick M; Ferrandon, Dominique | Proceedings of the National Academy of Sciences of the United States of America | 2011 Oct 18 | 17378-83 | 21987808 |
| Two forms of loops generate the chromatin conformation of the immunoglobulin heavy-chain gene locus. | Guo, Changying; Gerasimova, Tatiana; Hao, Haiping; Ivanova, Irina; Chakraborty, Tirtha; Selimyan, Roza; Oltz, Eugene M; Sen, Ranjan | Cell | 2011 Oct 14 | 332-43 | 21982154 |
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