Publications Search by Program
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The search results on this publication page are automated on a monthly schedule based on acknowledgement of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.
NIH Director's Pioneer Award Program (2885)
| Publication Title | Authors | Journal | Publication Date | Page No | PubMedID |
|---|---|---|---|---|---|
| Telomere Dysfunction Induces Sirtuin Repression that Drives Telomere-Dependent Disease. | Amano, Hisayuki; Chaudhury, Arindam; Rodriguez-Aguayo, Cristian; Lu, Lan; Akhanov, Viktor; Catic, Andre; Popov, Yury V; Verdin, Eric; Johnson, Hannah; Stossi, Fabio; Sinclair, David A; Nakamaru-Ogiso, Eiko; Lopez-Berestein, Gabriel; Chang, Jeffrey T; Neilson, Joel R; Meeker, Alan; Finegold, Milton; Baur, Joseph A; Sahin, Ergun | Cell metabolism. | 2019 Mar 20; | 30930169 | |
| Multigenerational obesity-induced perturbations in oocyte-secreted factor signalling can be ameliorated by exercise and nicotinamide mononucleotide. | Bertoldo, M J; Uddin, G M; Youngson, N A; Agapiou, D; Walters, K A; Sinclair, D A; Morris, M J; Gilchrist, R B | Human reproduction open. | 2018; | 30895251 | |
| How face perception unfolds over time. | Dobs, Katharina; Isik, Leyla; Pantazis, Dimitrios; Kanwisher, Nancy | Nature communications. | 2019 03 19; | 30890707 | |
| Studying interactions between dendritic cells and T cells in vivo. | Chudnovskiy, Aleksey; Pasqual, Giulia; Victora, Gabriel D | Current opinion in immunology. | 2019 Mar 15; | 30884422 | |
| Lymphatic network remodeling after small bowel resection. | Onufer, Emily J; Czepielewski, Rafael; Seiler, Kristen M; Erlich, Emma; Courtney, Cathleen M; Bustos, Aiza; Randolph, Gwendalyn J; Warner, Brad W | Journal of pediatric surgery. | 2019 Feb 28; | 30879758 | |
| Commensal Candida albicans Positively Calibrates Systemic Th17 Immunological Responses. | Shao, Tzu-Yu; Ang, W X Gladys; Jiang, Tony T; Huang, Felicia Scaggs; Andersen, Heidi; Kinder, Jeremy M; Pham, Giang; Burg, Ashley R; Ruff, Brandy; Gonzalez, Tammy; Khurana Hershey, Gurjit K; Haslam, David B; Way, Sing Sing | Cell host & microbe. | 2019 Mar 13; | 30870622 | |
| Multiple basal cell carcinomas in a patient with myotonic dystrophy type 1. | Feng, Jessica; LaChance, Avery; Sinclair, David A; Asgari, Maryam M | BMJ case reports. | 2019 Mar 08; | 30852496 | |
| Personalized virtual-heart technology for guiding the ablation of infarct-related ventricular tachycardia. | Prakosa, Adityo; Arevalo, Hermenegild J; Deng, Dongdong; Boyle, Patrick M; Nikolov, Plamen P; Ashikaga, Hiroshi; Blauer, Joshua Je; Ghafoori, Elyar; Park, Carolyn J; Blake 3rd, Robert C; Han, Frederick T; MacLeod, Rob S; Halperin, Henry R; Callans, David J; Ranjan, Ravi; Chrispin, Jonathan; Nazarian, Saman; Trayanova, Natalia A | Nature biomedical engineering. | 2018 Oct; | 30847259 | |
| Computational Identification of Ventricular Arrhythmia Risk in Pediatric Myocarditis. | Cartoski, Mark J; Nikolov, Plamen P; Prakosa, Adityo; Boyle, Patrick M; Spevak, Philip J; Trayanova, Natalia A | Pediatric cardiology. | 2019 Apr; | 30840104 | |
| Spastin is a dual-function enzyme that severs microtubules and promotes their regrowth to increase the number and mass of microtubules. | Kuo, Yin-Wei; Trottier, Olivier; Mahamdeh, Mohammed; Howard, Jonathon | Proceedings of the National Academy of Sciences of the United States of America. | 2019 Mar 19; | 30837315 | |
| Novel electrode technologies for neural recordings. | Hong, Guosong; Lieber, Charles M | Nature reviews. Neuroscience. | 2019 Mar 04; | 30833706 | |
| Higher-Order Clustering of the Transmembrane Anchor of DR5 Drives Signaling. | Pan, Liqiang; Fu, Tian-Min; Zhao, Wenbin; Zhao, Linlin; Chen, Wen; Qiu, Chixiao; Liu, Wenhui; Liu, Zhijun; Piai, Alessandro; Fu, Qingshan; Chen, Shuqing; Wu, Hao; Chou, James J | Cell. | 2019 Mar 07; | 30827683 | |
| An integrative computational architecture for object-driven cortex. | Yildirim, Ilker; Wu, Jiajun; Kanwisher, Nancy; Tenenbaum, Joshua | Current opinion in neurobiology. | 2019 Feb 27; | 30825704 | |
| Epigenetic changes during aging and their reprogramming potential. | Kane, Alice E; Sinclair, David A | Critical reviews in biochemistry and molecular biology. | 2019 Feb; | 30822165 | |
| Bioinspired neuron-like electronics. | Yang, Xiao; Zhou, Tao; Zwang, Theodore J; Hong, Guosong; Zhao, Yunlong; Viveros, Robert D; Fu, Tian-Ming; Gao, Teng; Lieber, Charles M | Nature materials. | 2019 Feb 25; | 30804509 | |
| Phosphate graphene as an intrinsically osteoinductive scaffold for stem cell-driven bone regeneration. | Arnold, Anne M; Holt, Brian D; Daneshmandi, Leila; Laurencin, Cato T; Sydlik, Stefanie A | Proceedings of the National Academy of Sciences of the United States of America. | 2019 03 12; | 30796184 | |
| Serine Metabolism Supports Macrophage IL-1? Production. | Rodriguez, Arianne E; Ducker, Gregory S; Billingham, Leah K; Martinez, Carlos A; Mainolfi, Nello; Suri, Vipin; Friedman, Adam; Manfredi, Mark G; Weinberg, Samuel E; Rabinowitz, Joshua D; Chandel, Navdeep S | Cell metabolism. | 2019 Apr 02; | 30773464 | |
| (Ph)ighting Phages: How Bacteria Resist Their Parasites. | Rostøl, Jakob T; Marraffini, Luciano | Cell host & microbe. | 2019 Feb 13; | 30763533 | |
| A genetically encoded single-wavelength sensor for imaging cytosolic and cell surface ATP. | Lobas, Mark A; Tao, Rongkun; Nagai, Jun; Kronschläger, Mira T; Borden, Philip M; Marvin, Jonathan S; Looger, Loren L; Khakh, Baljit S | Nature communications. | 2019 Feb 12; | 30755613 | |
| The role of personalized atrial modeling in understanding atrial fibrillation mechanisms and improving treatment. | Aronis, Konstantinos N; Ali, Rheeda; Trayanova, Natalia A | International journal of cardiology. | 2019 Jan 31; | 30755334 | |
| L1 drives IFN in senescent cells and promotes age-associated inflammation. | De Cecco, Marco; Ito, Takahiro; Petrashen, Anna P; Elias, Amy E; Skvir, Nicholas J; Criscione, Steven W; Caligiana, Alberto; Brocculi, Greta; Adney, Emily M; Boeke, Jef D; Le, Oanh; Beauséjour, Christian; Ambati, Jayakrishna; Ambati, Kameshwari; Simon, Matthew; Seluanov, Andrei; Gorbunova, Vera; Slagboom, P Eline; Helfand, Stephen L; Neretti, Nicola; Sedivy, John M | Nature. | 2019 02; | 30728521 | |
| Genome-wide colocalization of RNA-DNA interactions and fusion RNA pairs. | Yan, Zhangming; Huang, Norman; Wu, Weixin; Chen, Weizhong; Jiang, Yiqun; Chen, Jingyao; Huang, Xuerui; Wen, Xingzhao; Xu, Jie; Jin, Qiushi; Zhang, Kang; Chen, Zhen; Chien, Shu; Zhong, Sheng | Proceedings of the National Academy of Sciences of the United States of America. | 2019 Feb 19; | 30718424 | |
| Lysosomal Signaling Promotes Longevity by Adjusting Mitochondrial Activity. | Ramachandran, Prasanna V; Savini, Marzia; Folick, Andrew K; Hu, Kuang; Masand, Ruchi; Graham, Brett H; Wang, Meng C | Developmental cell. | 2019 Jan 23; | 30713071 | |
| Transcytosis at the blood-brain barrier. | Ayloo, Swathi; Gu, Chenghua | Current opinion in neurobiology. | 2019 Jan 29; | 30708291 | |
| Intersectional monosynaptic tracing for dissecting subtype-specific organization of GABAergic interneuron inputs. | Yetman, Michael J; Washburn, Eric; Hyun, Jung Ho; Osakada, Fumitaka; Hayano, Yasufumi; Zeng, Hongkui; Callaway, Edward M; Kwon, Hyung-Bae; Taniguchi, Hiroki | Nature neuroscience. | 2019 Jan 28; | 30692688 | |
| Non-specific degradation of transcripts promotes plasmid clearance during type III-A CRISPR-Cas immunity. | Rostøl, Jakob T; Marraffini, Luciano A | Nature microbiology. | 2019 Jan 28; | 30692669 | |
| SERPINB1-mediated checkpoint of inflammatory caspase activation. | Choi, Youn Jung; Kim, Stephanie; Choi, Younho; Nielsen, Travis B; Yan, Jun; Lu, Alvin; Ruan, Jianbin; Lee, Hye-Ra; Wu, Hao; Spellberg, Brad; Jung, Jae U | Nature immunology. | 2019 Jan 28; | 30692621 | |
| Nanofiber/Microsphere Hybrid Matrices In Vivo for Bone Regenerative Engineering: A Preliminary Report. | Nelson, Clarke; Khan, Yusuf; Laurencin, Cato T | Regenerative engineering and translational medicine. | 2018 Sep; | 30687776 | |
| Conformational flexibility and inhibitor binding to unphosphorylated interleukin-1 receptor-associated kinase 4 (IRAK4). | Wang, Li; Ferrao, Ryan; Li, Qiubai; Hatcher, John M; Choi, Hwan Geun; Buhrlage, Sara J; Gray, Nathanael S; Wu, Hao | The Journal of biological chemistry. | 2019 Jan 24; | 30679311 | |
| New insights on the cardiac safety factor: Unraveling the relationship between conduction velocity and robustness of propagation. | Boyle, Patrick M; Franceschi, William H; Constantin, Marion; Hawks, Claudia; Desplantez, Thomas; Trayanova, Natalia A; Vigmond, Edward J | Journal of molecular and cellular cardiology. | 2019 Mar; | 30677394 | |
| Molecular mechanism for NLRP6 inflammasome assembly and activation. | Shen, Chen; Lu, Alvin; Xie, Wen Jun; Ruan, Jianbin; Negro, Roberto; Egelman, Edward H; Fu, Tian-Min; Wu, Hao | Proceedings of the National Academy of Sciences of the United States of America. | 2019 Feb 05; | 30674671 | |
| Engineering of CRISPR-Cas12b for human genome editing. | Strecker, Jonathan; Jones, Sara; Koopal, Balwina; Schmid-Burgk, Jonathan; Zetsche, Bernd; Gao, Linyi; Makarova, Kira S; Koonin, Eugene V; Zhang, Feng | Nature communications. | 2019 01 22; | 30670702 | |
| Mimicry by a viral RHIM. | Mompeán, Miguel; Bozkurt, Gunes; Wu, Hao | EMBO reports. | 2019 Feb; | 30665943 | |
| Crystal structure of the WD40 domain dimer of LRRK2. | Zhang, Pengfei; Fan, Ying; Ru, Heng; Wang, Li; Magupalli, Venkat Giri; Taylor, Susan S; Alessi, Dario R; Wu, Hao | Proceedings of the National Academy of Sciences of the United States of America. | 2019 Jan 29; | 30635421 | |
| The usual suspects, dopamine and alpha-synuclein, conspire to cause neurodegeneration. | Mor, Danielle E; Daniels, Malcolm J; Ischiropoulos, Harry | Movement disorders : official journal of the Movement Disorder Society. | 2019 Feb; | 30633814 | |
| Subcellular transcriptomes and proteomes of developing axon projections in the cerebral cortex. | Poulopoulos, Alexandros; Murphy, Alexander J; Ozkan, Abdulkadir; Davis, Patrick; Hatch, John; Kirchner, Rory; Macklis, Jeffrey D | Nature. | 2019 01; | 30626971 | |
| A likelihood approach to testing hypotheses on the co-evolution of epigenome and genome. | Lu, Jia; Cao, Xiaoyi; Zhong, Sheng | PLoS computational biology. | 2018 Dec; | 30586383 | |
| Peak Annotation and Verification Engine for Untargeted LC-MS Metabolomics. | Wang, Lin; Xing, Xi; Chen, Li; Yang, Lifeng; Su, Xiaoyang; Rabitz, Herschel; Lu, Wenyun; Rabinowitz, Joshua D | Analytical chemistry. | 2019 Feb 05; | 30586294 | |
| GITAR: An Open Source Tool for Analysis and Visualization of Hi-C Data. | Calandrelli, Riccardo; Wu, Qiuyang; Guan, Jihong; Zhong, Sheng | Genomics, proteomics & bioinformatics. | 2018 Dec 13; | 30553884 | |
| Transcriptional profiling of isogenic Friedreich ataxia neurons and effect of an HDAC inhibitor on disease signatures. | Lai, Jiun-I; Nachun, Daniel; Petrosyan, Lina; Throesch, Benjamin; Campau, Erica; Gao, Fuying; Baldwin, Kristin K; Coppola, Giovanni; Gottesfeld, Joel M; Soragni, Elisabetta | The Journal of biological chemistry. | 2019 Feb 08; | 30552117 | |
| Unveiling the Role of the Most Impactful Cardiovascular Risk Locus through Haplotype Editing. | Lo Sardo, Valentina; Chubukov, Pavel; Ferguson, William; Kumar, Aditya; Teng, Evan L; Duran, Michael; Zhang, Lei; Cost, Gregory; Engler, Adam J; Urnov, Fyodor; Topol, Eric J; Torkamani, Ali; Baldwin, Kristin K | Cell. | 2018 Dec 13; | 30528432 | |
| Dynamics of Cas10 Govern Discrimination between Self and Non-self in Type III CRISPR-Cas Immunity. | Wang, Ling; Mo, Charlie Y; Wasserman, Michael R; Rostøl, Jakob T; Marraffini, Luciano A; Liu, Shixin | Molecular cell. | 2018 Nov 27; | 30503774 | |
| Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity. | Jia, Ning; Mo, Charlie Y; Wang, Chongyuan; Eng, Edward T; Marraffini, Luciano A; Patel, Dinshaw J | Molecular cell. | 2019 Jan 17; | 30503773 | |
| The Hairpin Form of r(G4C2)exp in c9ALS/FTD Is Repeat-Associated Non-ATG Translated and a Target for Bioactive Small Molecules. | Wang, Zi-Fu; Ursu, Andrei; Childs-Disney, Jessica L; Guertler, Rea; Yang, Wang-Yong; Bernat, Viachaslau; Rzuczek, Suzanne G; Fuerst, Rita; Zhang, Yong-Jie; Gendron, Tania F; Yildirim, Ilyas; Dwyer, Brendan G; Rice, Joseph E; Petrucelli, Leonard; Disney, M | Cell chemical biology. | 2018 Nov 29; | 30503283 | |
| Choice of vehicle affects pyraclostrobin toxicity in mice. | Tuttle, Alexander H; Salazar, Gabriela; Cooper, Ellen M; Stapleton, Heather M; Zylka, Mark J | Chemosphere. | 2019 Mar; | 30497033 | |
| Big bottlenecks in cardiovascular tissue engineering. | Huang, Ngan F; Serpooshan, Vahid; Morris, Viola B; Sayed, Nazish; Pardon, Gaspard; Abilez, Oscar J; Nakayama, Karina H; Pruitt, Beth L; Wu, Sean M; Yoon, Young-Sup; Zhang, Jianyi; Wu, Joseph C | Communications biology. | 2018; | 30480100 | |
| Structures and gating mechanism of human TRPM2. | Wang, Longfei; Fu, Tian-Min; Zhou, Yiming; Xia, Shiyu; Greka, Anna; Wu, Hao | Science (New York, N.Y.). | 2018 12 21; | 30467180 | |
| New Drosophila Long-Term Memory Genes Revealed by Assessing Computational Function Prediction Methods. | Kacsoh, Balint Z; Barton, Stephen; Jiang, Yuxiang; Zhou, Naihui; Mooney, Sean D; Friedberg, Iddo; Radivojac, Predrag; Greene, Casey S; Bosco, Giovanni | G3 (Bethesda, Md.). | 2019 01 09; | 30463884 | |
| Comparing the Effects of Low-Protein and High-Carbohydrate Diets and Caloric Restriction on Brain Aging in Mice. | Wahl, Devin; Solon-Biet, Samantha M; Wang, Qiao-Ping; Wali, Jibran A; Pulpitel, Tamara; Clark, Ximonie; Raubenheimer, David; Senior, Alistair M; Sinclair, David A; Cooney, Gregory J; de Cabo, Rafael; Cogger, Victoria C; Simpson, Stephen J; Le Couteur, David G | Cell reports. | 2018 Nov 20; | 30463018 | |
| Interleukin-17 Drives Interstitial Entrapment of Tissue Lipoproteins in Experimental Psoriasis. | Huang, Li-Hao; Zinselmeyer, Bernd H; Chang, Chih-Hao; Saunders, Brian T; Elvington, Andrew; Baba, Osamu; Broekelmann, Thomas J; Qi, Lina; Rueve, Joseph S; Swartz, Melody A; Kim, Brian S; Mecham, Robert P; Wiig, Helge; Thomas, Michael J; Sorci-Thomas, Mary | Cell metabolism. | 2018 Nov 05; | 30415924 | |
| Dopamine enhances signal-to-noise ratio in cortical-brainstem encoding of aversive stimuli. | Vander Weele, Caitlin M; Siciliano, Cody A; Matthews, Gillian A; Namburi, Praneeth; Izadmehr, Ehsan M; Espinel, Isabella C; Nieh, Edward H; Schut, Evelien H S; Padilla-Coreano, Nancy; Burgos-Robles, Anthony; Chang, Chia-Jung; Kimchi, Eyal Y; Beyeler, Anna | Nature. | 2018 11; | 30405240 | |
| Publisher Correction: Longitudinal analysis of biomarker data from a personalized nutrition platform in healthy subjects. | Westerman, Kenneth; Reaver, Ashley; Roy, Catherine; Ploch, Margaret; Sharoni, Erin; Nogal, Bartek; Sinclair, David A; Katz, David L; Blumberg, Jeffrey B; Blander, Gil | Scientific reports. | 2018 Nov 08; | 30405144 | |
| 'Inside Out'- a dialogue between mitochondria and bacteria. | Han, Bing; Lin, Chih-Chun Janet; Hu, Guo; Wang, Meng C | The FEBS journal. | 2019 Feb; | 30390412 | |
| Drugging the RNA World. | Disney, Matthew D; Dwyer, Brendan G; Childs-Disney, Jessica L | Cold Spring Harbor perspectives in biology. | 2018 Nov 01; | 30385607 | |
| Learning time-varying information flow from single-cell epithelial to mesenchymal transition data. | Krishnaswamy, Smita; Zivanovic, Nevena; Sharma, Roshan; Pe'er, Dana; Bodenmiller, Bernd | PloS one. | 2018; | 30372433 | |
| Pathogen blockade of TAK1 triggers caspase-8-dependent cleavage of gasdermin D and cell death. | Orning, Pontus; Weng, Dan; Starheim, Kristian; Ratner, Dmitry; Best, Zachary; Lee, Bettina; Brooks, Alexandria; Xia, Shiyu; Wu, Hao; Kelliher, Michelle A; Berger, Scott B; Gough, Peter J; Bertin, John; Proulx, Megan M; Goguen, Jon D; Kayagaki, Nobuhiko; Fitzgerald, Katherine A; Lien, Egil | Science (New York, N.Y.). | 2018 11 30; | 30361383 | |
| PIEZOs mediate neuronal sensing of blood pressure and the baroreceptor reflex. | Zeng, Wei-Zheng; Marshall, Kara L; Min, Soohong; Daou, Ihab; Chapleau, Mark W; Abboud, Francois M; Liberles, Stephen D; Patapoutian, Ardem | Science (New York, N.Y.). | 2018 10 26; | 30361375 | |
| Macrophage Biology, Classification, and Phenotype in Cardiovascular Disease: JACC Macrophage in CVD Series (Part 1). | Williams, Jesse W; Giannarelli, Chiara; Rahman, Adeeb; Randolph, Gwendalyn J; Kovacic, Jason C | Journal of the American College of Cardiology. | 2018 Oct 30; | 30360826 | |
| Neural Circuit Motifs in Valence Processing. | Tye, Kay M | Neuron. | 2018 Oct 24; | 30359607 | |
| Microbial Transplantation With Human Gut Commensals Containing CutC Is Sufficient to Transmit Enhanced Platelet Reactivity and Thrombosis Potential. | Skye, Sarah M; Zhu, Weifei; Romano, Kymberleigh A; Guo, Chun-Jun; Wang, Zeneng; Jia, Xun; Kirsop, Jennifer; Haag, Bridget; Lang, Jennifer M; DiDonato, Joseph A; Tang, W H Wilson; Lusis, Aldons J; Rey, Federico E; Fischbach, Michael A; Hazen, Stanley L | Circulation research. | 2018 Oct 26; | 30359185 | |
| Quantitative Real-Time Imaging of Glutathione with Sub-Cellular Resolution. | Jiang, Xiqian; Zhang, Chengwei; Chen, Jianwei; Choi, Sungwoo; Zhou, Ying; Zhao, Mingkun; Song, Xianzhou; Chen, Xi; Maletic-Savatic, Mirjana; Palzkill, Timothy Gerald; Moore, David; Wang, Meng C; Wang, Jin | Antioxidants & redox signaling. | 2018 Oct 25; | 30358421 | |
| Lymph nodes go with the flow. | Czepielewski, Rafael S; Randolph, Gwendalyn J | The Journal of experimental medicine. | 2018 Nov 05; | 30355618 | |
| Sirtuins and NAD+ in the Development and Treatment of Metabolic and Cardiovascular Diseases. | Kane, Alice E; Sinclair, David A | Circulation research. | 2018 Sep 14; | 30355082 | |
| Large-scale reconstruction of cell lineages using single-cell readout of transcriptomes and CRISPR-Cas9 barcodes by scGESTALT. | Raj, Bushra; Gagnon, James A; Schier, Alexander F | Nature protocols. | 2018 Nov; | 30353175 | |
| Biomaterial microlasers implantable in the cornea, skin, and blood. | Humar, Matja?; Dobravec, Anja; Zhao, Xiangwei; Yun, Seok Hyun | Optica. | 2017 Sep 20; | 30333986 | |
| Caenorhabditis elegans sperm carry a histone-based epigenetic memory of both spermatogenesis and oogenesis. | Tabuchi, Tomoko M; Rechtsteiner, Andreas; Jeffers, Tess E; Egelhofer, Thea A; Murphy, Coleen T; Strome, Susan | Nature communications. | 2018 10 17; | 30333496 | |
| Optimal contrast-enhanced MRI image thresholding for accurate prediction of ventricular tachycardia using ex-vivo high resolution models. | Deng, Dongdong; Nikolov, Plamen; Arevalo, Hermenegild J; Trayanova, Natalia A | Computers in biology and medicine. | 2018 Nov 01; | 30301573 | |
| Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. | Tabula Muris Consortium; Overall coordination; Logistical coordination; Organ collection and processing; Library preparation and sequencing; Computational data analysis; Cell type annotation; Writing group; Supplemental text writing group; Principal investigators | Nature. | 2018 10; | 30283141 | |
| Longitudinal analysis of biomarker data from a personalized nutrition platform in healthy subjects. | Westerman, Kenneth; Reaver, Ashley; Roy, Catherine; Ploch, Margaret; Sharoni, Erin; Nogal, Bartek; Sinclair, David A; Katz, David L; Blumberg, Jeffrey B; Blander, Gil | Scientific reports. | 2018 Oct 02; | 30279436 | |
| Cryo-EM structures of ASC and NLRC4 CARD filaments reveal a unified mechanism of nucleation and activation of caspase-1. | Li, Yang; Fu, Tian-Min; Lu, Alvin; Witt, Kristen; Ruan, Jianbin; Shen, Chen; Wu, Hao | Proceedings of the National Academy of Sciences of the United States of America. | 2018 10 23; | 30279182 | |
| Notch2-dependent DC2s mediate splenic germinal center responses. | Briseño, Carlos G; Satpathy, Ansuman T; Davidson 4th, Jesse T; Ferris, Stephen T; Durai, Vivek; Bagadia, Prachi; O'Connor, Kevin W; Theisen, Derek J; Murphy, Theresa L; Murphy, Kenneth M | Proceedings of the National Academy of Sciences of the United States of America. | 2018 10 16; | 30279176 | |
| Effects of 3D culturing conditions on the transcriptomic profile of stem-cell-derived neurons. | Tekin, Halil; Simmons, Sean; Cummings, Beryl; Gao, Linyi; Adiconis, Xian; Hession, Cynthia C; Ghoshal, Ayan; Dionne, Danielle; Choudhury, Sourav R; Yesilyurt, Volkan; Sanjana, Neville E; Shi, Xi; Lu, Congyi; Heidenreich, Matthias; Pan, Jen Q; Levin, Joshu | Nature biomedical engineering. | 2018 Jul; | 30271673 | |
| Two-Photon Optogenetic Mapping of Excitatory Synaptic Connectivity and Strength. | Izquierdo-Serra, Mercè; Hirtz, Jan J; Shababo, Ben; Yuste, Rafael | iScience. | 2018 Oct 26; | 30268510 | |
| Cytoplasmic Amplification of Transcriptional Noise Generates Substantial Cell-to-Cell Variability. | Hansen, Maike M K; Desai, Ravi V; Simpson, Michael L; Weinberger, Leor S | Cell systems. | 2018 Sep 11; | 30243562 | |
| RNAs as Proximity-Labeling Media for Identifying Nuclear Speckle Positions Relative to the Genome. | Chen, Weizhong; Yan, Zhangming; Li, Simin; Huang, Norman; Huang, Xuerui; Zhang, Jin; Zhong, Sheng | iScience. | 2018 Jun 29; | 30240742 | |
| Shared understanding of narratives is correlated with shared neural responses. | Nguyen, Mai; Vanderwal, Tamara; Hasson, Uri | NeuroImage. | 2018 Sep 12; | 30217543 | |
| Differential IL-2 expression defines developmental fates of follicular versus nonfollicular helper T cells. | DiToro, Daniel; Winstead, Colleen J; Pham, Duy; Witte, Steven; Andargachew, Rakieb; Singer, Jeffrey R; Wilson, C Garrett; Zindl, Carlene L; Luther, Rita J; Silberger, Daniel J; Weaver, Benjamin T; Kolawole, E Motunrayo; Martinez, Ryan J; Turner, Henrietta | Science (New York, N.Y.). | ; | 30213884 | |
| Dynamic Acetylation of Phosphoenolpyruvate Carboxykinase Toggles Enzyme Activity between Gluconeogenic and Anaplerotic Reactions. | Latorre-Muro, Pedro; Baeza, Josue; Armstrong, Eric A; Hurtado-Guerrero, Ramón; Corzana, Francisco; Wu, Lindsay E; Sinclair, David A; López-Buesa, Pascual; Carrodeguas, José A; Denu, John M | Molecular cell. | 2018 09 06; | 30193097 | |
| Targeting mitochondria for cardiovascular disorders: therapeutic potential and obstacles. | Bonora, Massimo; Wieckowski, Mariusz R; Sinclair, David A; Kroemer, Guido; Pinton, Paolo; Galluzzi, Lorenzo | Nature reviews. Cardiology. | 2019 Jan; | 30177752 | |
| RNA, Action through Interactions. | Nguyen, Tri C; Zaleta-Rivera, Kathia; Huang, Xuerui; Dai, Xiaofeng; Zhong, Sheng | Trends in genetics : TIG. | 2018 Aug 31; | 30177410 | |
| Reducing Astrocyte Calcium Signaling In Vivo Alters Striatal Microcircuits and Causes Repetitive Behavior. | Yu, Xinzhu; Taylor, Anna M W; Nagai, Jun; Golshani, Peyman; Evans, Christopher J; Coppola, Giovanni; Khakh, Baljit S | Neuron. | 2018 Sep 19; | 30174118 | |
| Three-dimensional genome structures of single diploid human cells. | Tan, Longzhi; Xing, Dong; Chang, Chi-Han; Li, Heng; Xie, X Sunney | Science (New York, N.Y.). | 2018 08 31; | 30166492 | |
| Post-transcriptional gene regulation by an Hfq-independent small RNA in Caulobacter crescentus. | Fröhlich, Kathrin S; Förstner, Konrad U; Gitai, Zemer | Nucleic acids research. | 2018 Nov 16; | 30165530 | |
| Widespread intronic polyadenylation inactivates tumour suppressor genes in leukaemia. | Lee, Shih-Han; Singh, Irtisha; Tisdale, Sarah; Abdel-Wahab, Omar; Leslie, Christina S; Mayr, Christine | Nature. | 2018 09; | 30150773 | |
| Tropomyosin dynamics during cardiac muscle contraction as governed by a multi-well energy landscape. | Aboelkassem, Yasser; Trayanova, Natalia | Progress in biophysics and molecular biology. | 2018 Aug 22; | 30145015 | |
| Neural Sensing of Organ Volume. | Umans, Benjamin D; Liberles, Stephen D | Trends in neurosciences. | 2018 Aug 21; | 30143276 | |
| RNA Guide Complementarity Prevents Self-Targeting in Type VI CRISPR Systems. | Meeske, Alexander J; Marraffini, Luciano A | Molecular cell. | 2018 09 06; | 30122537 | |
| An Mtb-Human Protein-Protein Interaction Map Identifies a Switch between Host Antiviral and Antibacterial Responses. | Penn, Bennett H; Netter, Zoe; Johnson, Jeffrey R; Von Dollen, John; Jang, Gwendolyn M; Johnson, Tasha; Ohol, Yamini M; Maher, Cyrus; Bell, Samantha L; Geiger, Kristina; Golovkine, Guillaume; Du, Xiaotang; Choi, Alex; Parry, Trevor; Mohapatra, Bhopal C; St | Molecular cell. | 2018 Aug 16; | 30118682 | |
| Links between environment, diet, and the hunter-gatherer microbiome. | Fragiadakis, Gabriela K; Smits, Samuel A; Sonnenburg, Erica D; Van Treuren, William; Reid, Gregor; Knight, Rob; Manjurano, Alphaxard; Changalucha, John; Dominguez-Bello, Maria Gloria; Leach, Jeff; Sonnenburg, Justin L | Gut microbes. | 2018 Aug 17; | 30118385 | |
| Assays for NAD+-Dependent Reactions and NAD+ Metabolites. | Schultz, Michael B; Lu, Yuancheng; Braidy, Nady; Sinclair, David A | Methods in molecular biology (Clifton, N.J.). | 2018; | 30097862 | |
| Microbiome: Focus on Causation and Mechanism. | Fischbach, Michael A | Cell. | 2018 Aug 09; | 30096310 | |
| Directed evolution of excited state lifetime and brightness in FusionRed using a microfluidic sorter. | Manna, Premashis; Hung, Sheng-Ting; Mukherjee, Srijit; Friis, Pia; Simpson, David M; Lo, Maria N; Palmer, Amy E; Jimenez, Ralph | Integrative biology : quantitative biosciences from nano to macro. | 2018 Aug 10; | 30094420 | |
| Association between MicroRNA-373 and Long Noncoding RNA NORAD in Hepatitis C Virus-Infected Hepatocytes Impairs Wee1 Expression for Growth Promotion. | Sur, Subhayan; Sasaki, Reina; Devhare, Pradip; Steele, Robert; Ray, Ranjit; Ray, Ratna B | Journal of virology. | 2018 Oct 15; | 30089699 | |
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| 5,10-methenyltetrahydrofolate synthetase deficiency causes a neurometabolic disorder associated with microcephaly, epilepsy, and cerebral hypomyelination. | Rodan, Lance H; Qi, Wanshu; Ducker, Gregory S; Demirbas, Didem; Laine, Regina; Yang, Edward; Walker, Melissa A; Eichler, Florian; Rabinowitz, Joshua D; Anselm, Irina; Berry, Gerard T; Undiagnosed Diseases Network (UDN) | Molecular genetics and metabolism. | 2018 09; | 30031689 | |
| Enzymatic one-step ring contraction for quinolone biosynthesis. | Kishimoto, Shinji; Hara, Kodai; Hashimoto, Hiroshi; Hirayama, Yuichiro; Champagne, Pier Alexandre; Houk, Kendall N; Tang, Yi; Watanabe, Kenji | Nature communications. | 2018 Jul 19; | 30026518 | |
| Drosophila species learn dialects through communal living. | Kacsoh, Balint Z; Bozler, Julianna; Bosco, Giovanni | PLoS genetics. | 2018 07; | 30024883 | |
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| Spreading depolarizations trigger caveolin-1-dependent endothelial transcytosis. | Sadeghian, Homa; Lacoste, Baptiste; Qin, Tao; Toussay, Xavier; Rosa, Roberto; Oka, Fumiaki; Chung, David Y; Takizawa, Tsubasa; Gu, Chenghua; Ayata, Cenk | Annals of neurology. | 2018 Sep; | 30014540 | |
| PKC? integrates spatiotemporally distinct Ca2+ and autocrine BDNF signaling to facilitate synaptic plasticity. | Colgan, Lesley A; Hu, Mo; Misler, Jaime A; Parra-Bueno, Paula; Moran, Corey M; Leitges, Michael; Yasuda, Ryohei | Nature neuroscience. | 2018 Aug; | 30013171 | |
| Resistance-gene-directed discovery of a natural-product herbicide with a new mode of action. | Yan, Yan; Liu, Qikun; Zang, Xin; Yuan, Shuguang; Bat-Erdene, Undramaa; Nguyen, Calvin; Gan, Jianhua; Zhou, Jiahai; Jacobsen, Steven E; Tang, Yi | Nature. | 2018 Jul; | 29995859 | |
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| Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment. | Azizi, Elham; Carr, Ambrose J; Plitas, George; Cornish, Andrew E; Konopacki, Catherine; Prabhakaran, Sandhya; Nainys, Juozas; Wu, Kenmin; Kiseliovas, Vaidotas; Setty, Manu; Choi, Kristy; Fromme, Rachel M; Dao, Phuong; McKenney, Peter T; Wasti, Ruby C; Kad | Cell. | 2018 Aug 23; | 29961579 | |
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| Four Key Steps Control Glycolytic Flux in Mammalian Cells. | Tanner, Lukas Bahati; Goglia, Alexander G; Wei, Monica H; Sehgal, Talen; Parsons, Lance R; Park, Junyoung O; White, Eileen; Toettcher, Jared E; Rabinowitz, Joshua D | Cell systems. | 2018 Jul 25; | 29960885 | |
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| MIN1PIPE: A Miniscope 1-Photon-Based Calcium Imaging Signal Extraction Pipeline. | Lu, Jinghao; Li, Chunyuan; Singh-Alvarado, Jonnathan; Zhou, Zhe Charles; Fröhlich, Flavio; Mooney, Richard; Wang, Fan | Cell reports. | 2018 Jun 19; | 29925007 | |
| RGS14 Restricts Plasticity in Hippocampal CA2 by Limiting Postsynaptic Calcium Signaling. | Evans, Paul R; Parra-Bueno, Paula; Smirnov, Michael S; Lustberg, Daniel J; Dudek, Serena M; Hepler, John R; Yasuda, Ryohei | eNeuro. | 2018 May-Jun; | 29911178 | |
| Limited Macrophage Positional Dynamics in Progressing or Regressing Murine Atherosclerotic Plaques. | Williams, Jesse W; Martel, Catherine; Potteaux, Stephane; Esaulova, Ekaterina; Ingersoll, Molly A; Elvington, Andrew; Saunders, Brian T; Huang, Li-Hao; Habenicht, Andreas J; Zinselmeyer, Bernd H; Randolph, Gwendalyn J | Arteriosclerosis, thrombosis, and vascular biology. | ; | 29903736 | |
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| Bright quantum dots emitting at ?1,600 nm in the NIR-IIb window for deep tissue fluorescence imaging. | Zhang, Mingxi; Yue, Jingying; Cui, Ran; Ma, Zhuoran; Wan, Hao; Wang, Feifei; Zhu, Shoujun; Zhou, Ying; Kuang, Yun; Zhong, Yeteng; Pang, Dai-Wen; Dai, Hongjie | Proceedings of the National Academy of Sciences of the United States of America. | 2018 06 26; | 29891702 | |
| Role of 3-Dimensional Architecture of Scar and Surviving Tissue in Ventricular Tachycardia: Insights From High-Resolution Ex Vivo Porcine Models. | Pashakhanloo, Farhad; Herzka, Daniel A; Halperin, Henry; McVeigh, Elliot R; Trayanova, Natalia A | Circulation. Arrhythmia and electrophysiology. | ; | 29880529 | |
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| Quantifying the uncertainty in model parameters using Gaussian process-based Markov chain Monte Carlo in cardiac electrophysiology. | Dhamala, Jwala; Arevalo, Hermenegild J; Sapp, John; Horácek, B Milan; Wu, Katherine C; Trayanova, Natalia A; Wang, Linwei | Medical image analysis. | ; | 29843078 | |
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| Mycobacterium tuberculosis-specific CD4+ and CD8+ T cells differ in their capacity to recognize infected macrophages. | Yang, Jason D; Mott, Daniel; Sutiwisesak, Rujapak; Lu, Yu-Jung; Raso, Fiona; Stowell, Britni; Babunovic, Greg Hunter; Lee, Jinhee; Carpenter, Steve M; Way, Sing Sing; Fortune, Sarah M; Behar, Samuel M | PLoS pathogens. | 2018 02; | 29782535 | |
| Multiple Click-Selective tRNA Synthetases Expand Mammalian Cell-Specific Proteomics. | Yang, Andrew C; du Bois, Haley; Olsson, Niclas; Gate, David; Lehallier, Benoit; Berdnik, Daniela; Brewer, Kyle D; Bertozzi, Carolyn R; Elias, Joshua E; Wyss-Coray, Tony | Journal of the American Chemical Society. | 2018 06 13; | 29775058 | |
| Single-step Precision Genome Editing in Yeast Using CRISPR-Cas9. | Akhmetov, Azat; Laurent, Jon M; Gollihar, Jimmy; Gardner, Elizabeth C; Garge, Riddhiman K; Ellington, Andrew D; Kachroo, Aashiq H; Marcotte, Edward M | Bio-protocol. | ; | 29770349 | |
| Role of inhibitory control in modulating focal seizure spread. | Liou, Jyun-You; Ma, Hongtao; Wenzel, Michael; Zhao, Mingrui; Baird-Daniel, Eliza; Smith, Elliot H; Daniel, Andy; Emerson, Ronald; Yuste, Rafael; Schwartz, Theodore H; Schevon, Catherine A | Brain : a journal of neurology. | 2018 Jul 01; | 29757347 | |
| A Post-Transcriptional Feedback Mechanism for Noise Suppression and Fate Stabilization. | Hansen, Maike M K; Wen, Winnie Y; Ingerman, Elena; Razooky, Brandon S; Thompson, Cassandra E; Dar, Roy D; Chin, Charles W; Simpson, Michael L; Weinberger, Leor S | Cell. | 2018 Jun 14; | 29754821 | |
| Fueling thought: Management of glycolysis and oxidative phosphorylation in neuronal metabolism. | Yellen, Gary | The Journal of cell biology. | 2018 Jul 02; | 29752396 | |
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| A Brain-wide Circuit Model of Heat-Evoked Swimming Behavior in Larval Zebrafish. | Haesemeyer, Martin; Robson, Drew N; Li, Jennifer M; Schier, Alexander F; Engert, Florian | Neuron. | 2018 May 16; | 29731253 | |
| Corticoamygdala Transfer of Socially Derived Information Gates Observational Learning. | Allsop, Stephen A; Wichmann, Romy; Mills, Fergil; Burgos-Robles, Anthony; Chang, Chia-Jung; Felix-Ortiz, Ada C; Vienne, Alienor; Beyeler, Anna; Izadmehr, Ehsan M; Glober, Gordon; Cum, Meghan I; Stergiadou, Johanna; Anandalingam, Kavitha K; Farris, Kathryn; Namburi, Praneeth; Leppla, Christopher A; Weddington, Javier C; Nieh, Edward H; Smith, Anne C; Ba, Demba; Brown, Emery N; Tye, Kay M | Cell. | 2018 May 31; | 29731170 | |
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| Microbial Genetic Composition Tunes Host Longevity. | Han, Bing; Sivaramakrishnan, Priya; Lin, Chih-Chun J; Neve, Isaiah A A; He, Jingquan; Tay, Li Wei Rachel; Sowa, Jessica N; Sizovs, Antons; Du, Guangwei; Wang, Jin; Herman, Christophe; Wang, Meng C | Cell. | 2018 May 03; | 29727664 | |
| Widespread intronic polyadenylation diversifies immune cell transcriptomes. | Singh, Irtisha; Lee, Shih-Han; Sperling, Adam S; Samur, Mehmet K; Tai, Yu-Tzu; Fulciniti, Mariateresa; Munshi, Nikhil C; Mayr, Christine; Leslie, Christina S | Nature communications. | 2018 Apr 30; | 29712909 | |
| Stage-specific Effects of Bioactive Lipids on Human iPSC Cardiac Differentiation and Cardiomyocyte Proliferation. | Scientific reports. | 2018 Apr 26; | 29700394 | ||
| Field-deployable viral diagnostics using CRISPR-Cas13. | Myhrvold, Cameron; Freije, Catherine A; Gootenberg, Jonathan S; Abudayyeh, Omar O; Metsky, Hayden C; Durbin, Ann F; Kellner, Max J; Tan, Amanda L; Paul, Lauren M; Parham, Leda A; Garcia, Kimberly F; Barnes, Kayla G; Chak, Bridget; Mondini, Adriano; Noguei | Science (New York, N.Y.). | 2018 04 27; | 29700266 | |
| Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis. | Science (New York, N.Y.). | 2018 06 01; | 29700225 | ||
| Cryo-EM structure of the gasdermin A3 membrane pore. | Nature. | 2018 May; | 29695864 | ||
| Bridging barriers: a comparative look at the blood-brain barrier across organisms. | O'Brown, Natasha M; Pfau, Sarah J; Gu, Chenghua | Genes & development. | 2018 04 01; | 29692355 | |
| Structural Biology: Piezo Senses Tension through Curvature. | Liang, Xin; Howard, Jonathon | Current biology : CB. | 2018 Apr 23; | 29689211 | |
| Quantitative Analysis of NAD Synthesis-Breakdown Fluxes. | Liu, Ling; Su, Xiaoyang; Quinn 3rd, William J; Hui, Sheng; Krukenberg, Kristin; Frederick, David W; Redpath, Philip; Zhan, Le; Chellappa, Karthikeyani; White, Eileen; Migaud, Marie; Mitchison, Timothy J; Baur, Joseph A; Rabinowitz, Joshua D | Cell metabolism. | 2018 May 01; | 29685734 | |
| Molecular Cancer Imaging in the Second Near-Infrared Window Using a Renal-Excreted NIR-II Fluorophore-Peptide Probe. | Wang, Weizhi; Ma, Zhuoran; Zhu, Shoujun; Wan, Hao; Yue, Jingying; Ma, Huilong; Ma, Rui; Yang, Qinglai; Wang, Zihua; Li, Qian; Qian, Yixia; Yue, Chunyan; Wang, Yuehua; Fan, Linyang; Zhong, Yeteng; Zhou, Ying; Gao, Hongpeng; Ruan, Junshan; Hu, Zhiyuan; Liang, Yongye; Dai, Hongjie | Advanced materials (Deerfield Beach, Fla.). | 2018 May; | 29682821 | |
| The Structure of the Necrosome RIPK1-RIPK3 Core, a Human Hetero-Amyloid Signaling Complex. | Mompeán, Miguel; Li, Wenbo; Li, Jixi; Laage, Ségolène; Siemer, Ansgar B; Bozkurt, Gunes; Wu, Hao; McDermott, Ann E | Cell. | 2018 May 17; | 29681455 | |
| Developmental and oncogenic programs in H3K27M gliomas dissected by single-cell RNA-seq. | Filbin, Mariella G; Tirosh, Itay; Hovestadt, Volker; Shaw, McKenzie L; Escalante, Leah E; Mathewson, Nathan D; Neftel, Cyril; Frank, Nelli; Pelton, Kristine; Hebert, Christine M; Haberler, Christine; Yizhak, Keren; Gojo, Johannes; Egervari, Kristof; Mount | Science (New York, N.Y.). | 2018 04 20; | 29674595 | |
| Amelioration of Neurosensory Structure and Function in Animal and Cellular Models of a Congenital Blindness. | Song, Ji Yun; Aravand, Puya; Nikonov, Sergei; Leo, Lanfranco; Lyubarsky, Arkady; Bennicelli, Jeannette L; Pan, Jieyan; Wei, Zhangyong; Shpylchak, Ivan; Herrera, Pamela; Bennett, Daniel J; Commins, Nicoletta; Maguire, Albert M; Pham, Jennifer; den Hollande | Molecular therapy : the journal of the American Society of Gene Therapy. | 2018 Mar 21; | 29673930 | |
| Comparative transcriptomics across 14 Drosophila species reveals signatures of longevity. | Ma, Siming; Avanesov, Andrei S; Porter, Emily; Lee, Byung Cheon; Mariotti, Marco; Zemskaya, Nadezhda; Guigo, Roderic; Moskalev, Alexey A; Gladyshev, Vadim N | Aging cell. | 2018 Apr 19; | 29671950 | |
| Holographic imaging and photostimulation of neural activity. | Yang, Weijian; Yuste, Rafael | Current opinion in neurobiology. | 2018 Jun; | 29660600 | |
| Design of a sustainable prepolarizing magnetic resonance imaging system for infant hydrocephalus. | Obungoloch, Johnes; Harper, Joshua R; Consevage, Steven; Savukov, Igor M; Neuberger, Thomas; Tadigadapa, Srinivas; Schiff, Steven J | Magma (New York, N.Y.). | 2018 Apr 11; | 29644479 | |
| Recent progress in photoacoustic molecular imaging. | Yao, Junjie; Wang, Lihong V | Current opinion in chemical biology. | 2018 Apr 06; | 29631120 | |
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| An Optical Neuron-Astrocyte Proximity Assay at Synaptic Distance Scales. | Octeau, J Christopher; Chai, Hua; Jiang, Ruotian; Bonanno, Shivan L; Martin, Kelsey C; Khakh, Baljit S | Neuron. | 2018 Apr 04; | 29621490 | |
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| Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain. | Raj, Bushra; Wagner, Daniel E; McKenna, Aaron; Pandey, Shristi; Klein, Allon M; Shendure, Jay; Gagnon, James A; Schier, Alexander F | Nature biotechnology. | 2018 Jun; | 29608178 | |
| Interbrain cortical synchronization encodes multiple aspects of social interactions in monkey pairs. | Tseng, Po-He; Rajangam, Sankaranarayani; Lehew, Gary; Lebedev, Mikhail A; Nicolelis, Miguel A L | Scientific reports. | 2018 Mar 29; | 29599529 | |
| Fates Aligned: Origins and Mechanisms of Ventricular Conduction System and Ventricular Wall Development. | Goodyer, William R; Wu, Sean M | Pediatric cardiology. | 2018 Mar 28; | 29594502 | |
| Anti-CTLA-4 therapy requires an Fc domain for efficacy. | Ingram, Jessica R; Blomberg, Olga S; Rashidian, Mohammad; Ali, Lestat; Garforth, Scott; Fedorov, Elena; Fedorov, Alexander A; Bonanno, Jeffrey B; Le Gall, Camille; Crowley, Stephanie; Espinosa, Camilo; Biary, Tamara; Keliher, Edmund J; Weissleder, Ralph; | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Apr 10; | 29581255 | |
| Reactivation of the Nkx2.5 cardiac enhancer after myocardial infarction does not presage myogenesis. | Deutsch, Marcus-André; Doppler, Stefanie A; Li, Xinghai; Lahm, Harald; Santamaria, Gianluca; Cuda, Giovanni; Eichhorn, Stefan; Ratschiller, Thomas; Dzilic, Elda; Dreßen, Martina; Eckart, Annekathrin; Stark, Konstantin; Massberg, Steffen; Bartels, Anna; Ri | Cardiovascular research. | 2018 Mar 20; | 29579159 | |
| Sirtuin activators and inhibitors: Promises, achievements, and challenges. | Dai, Han; Sinclair, David A; Ellis, James L; Steegborn, Clemens | Pharmacology & therapeutics. | 2018 Mar 22; | 29577959 | |
| Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq. | Pandey, Shristi; Shekhar, Karthik; Regev, Aviv; Schier, Alexander F | Current biology : CB. | 2018 Apr 02; | 29576475 | |
| Global remodeling of the mouse DNA methylome during aging and in response to calorie restriction. | Sziráki, András; Tyshkovskiy, Alexander; Gladyshev, Vadim N | Aging cell. | 2018 Mar 25; | 29575528 | |
| The African turquoise killifish: A research organism to study vertebrate aging and diapause. | Hu, Chi-Kuo; Brunet, Anne | Aging cell. | 2018 Jun; | 29573324 | |
| Impairment of an Endothelial NAD+-H2S Signaling Network Is a Reversible Cause of Vascular Aging. | Das, Abhirup; Huang, George X; Bonkowski, Michael S; Longchamp, Alban; Li, Catherine; Schultz, Michael B; Kim, Lynn-Jee; Osborne, Brenna; Joshi, Sanket; Lu, Yuancheng; Treviño-Villarreal, Jose Humberto; Kang, Myung-Jin; Hung, Tzong-Tyng; Lee, Brendan; Wil | Cell. | 2018 Mar 22; | 29570999 | |
| Amino Acid Restriction Triggers Angiogenesis via GCN2/ATF4 Regulation of VEGF and H2S Production. | Longchamp, Alban; Mirabella, Teodelinda; Arduini, Alessandro; MacArthur, Michael R; Das, Abhirup; Treviño-Villarreal, J Humberto; Hine, Christopher; Ben-Sahra, Issam; Knudsen, Nelson H; Brace, Lear E; Reynolds, Justin; Mejia, Pedro; Tao, Ming; Sharma, Gau | Cell. | 2018 Mar 22; | 29570992 | |
| Economic burden of neonatal sepsis in sub-Saharan Africa. | Ranjeva, Sylvia L; Warf, Benjamin C; Schiff, Steven J | BMJ global health. | 2018; | 29564153 | |
| A bright organic NIR-II nanofluorophore for three-dimensional imaging into biological tissues. | Wan, Hao; Yue, Jingying; Zhu, Shoujun; Uno, Takaaki; Zhang, Xiaodong; Yang, Qinglai; Yu, Kuai; Hong, Guosong; Wang, Junying; Li, Lulin; Ma, Zhuoran; Gao, Hongpeng; Zhong, Yeteng; Su, Jessica; Antaris, Alexander L; Xia, Yan; Luo, Jian; Liang, Yongye; Dai, Hongjie | Nature communications. | 2018 Mar 21; | 29563581 | |
| A deep neural network to assess spontaneous pain from mouse facial expressions. | Tuttle, Alexander H; Molinaro, Mark J; Jethwa, Jasmine F; Sotocinal, Susana G; Prieto, Juan C; Styner, Martin A; Mogil, Jeffrey S; Zylka, Mark J | Molecular pain. | 2018 Jan-Dec; | 29546805 | |
| Personalized Imaging and Modeling Strategies for Arrhythmia Prevention and Therapy. | Trayanova, Natalia A; Boyle, Patrick M; Nikolov, Plamen P | Current opinion in biomedical engineering. | 2018 Mar; | 29546250 | |
| The cis-regulatory dynamics of embryonic development at single-cell resolution. | Cusanovich, Darren A; Reddington, James P; Garfield, David A; Daza, Riza M; Aghamirzaie, Delasa; Marco-Ferreres, Raquel; Pliner, Hannah A; Christiansen, Lena; Qiu, Xiaojie; Steemers, Frank J; Trapnell, Cole; Shendure, Jay; Furlong, Eileen E M | Nature. | 2018 Mar 22; | 29539636 | |
| The Biosynthesis of Lipooligosaccharide from Bacteroides thetaiotaomicron. | Jacobson, Amy N; Choudhury, Biswa P; Fischbach, Michael A | mBio. | 2018 Mar 13; | 29535205 | |
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| Tissue-like Neural Probes for Understanding and Modulating the Brain. | Hong, Guosong; Viveros, Robert D; Zwang, Theodore J; Yang, Xiao; Lieber, Charles M | Biochemistry. | 2018 Mar 19; | 29529359 | |
| Zinc transporters belonging to the Cation Diffusion Facilitator (CDF) family have complementary roles in transporting zinc out of the cytosol. | Choi, Sangyong; Hu, Ya-Mei; Corkins, Mark E; Palmer, Amy E; Bird, Amanda J | PLoS genetics. | 2018 03; | 29529046 | |
| How to Build a Bacterial Cell: MreB as the Foreman of E. coli Construction. | Shi, Handuo; Bratton, Benjamin P; Gitai, Zemer; Huang, Kerwyn Casey | Cell. | 2018 Mar 08; | 29522748 | |
| Nicotinamide Improves Aspects of Healthspan, but Not Lifespan, in Mice. | Mitchell, Sarah J; Bernier, Michel; Aon, Miguel A; Cortassa, Sonia; Kim, Eun Young; Fang, Evandro F; Palacios, Hector H; Ali, Ahmed; Navas-Enamorado, Ignacio; Di Francesco, Andrea; Kaiser, Tamzin A; Waltz, Tyler B; Zhang, Ning; Ellis, James L; Elliott, Pe | Cell metabolism. | 2018 Mar 06; | 29514072 | |
| Therapeutic Potential of NAD-Boosting Molecules: The In Vivo Evidence. | Rajman, Luis; Chwalek, Karolina; Sinclair, David A | Cell metabolism. | 2018 Mar 06; | 29514064 | |
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| Overproduction of Neurons Is Correlated with Enhanced Cortical Ensembles and Increased Perceptual Discrimination. | Fang, Wei-Qun; Yuste, Rafael | Cell reports. | 2017 Oct 10; | 29020625 | |
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| Nkx2.5+?Cardiomyoblasts Contribute to Cardiomyogenesis in the Neonatal Heart. | Serpooshan, Vahid; Liu, Yuan-Hung; Buikema, Jan W; Galdos, Francisco X; Chirikian, Orlando; Paige, Sharon; Venkatraman, Sneha; Kumar, Anusha; Rawnsley, David R; Huang, Xiaojing; Pijnappels, Daniël A; Wu, Sean M | Scientific reports. | 2017 Oct 03; | 28974782 | |
| Motionless volumetric photoacoustic microscopy with spatially invariant resolution. | Yang, Jiamiao; Gong, Lei; Xu, Xiao; Hai, Pengfei; Shen, Yuecheng; Suzuki, Yuta; Wang, Lihong V | Nature communications. | 2017 10 03; | 28974681 | |
| Targeted antigen delivery by an anti-class II MHC VHH elicits focused ?MUC1(Tn) immunity. | Fang, Tao; Van Elssen, Catharina H M J; Duarte, Joao N; Guzman, Jonathan S; Chahal, Jasdave S; Ling, Jingjing; Ploegh, Hidde L | Chemical science. | 2017 Aug 01; | 28970938 | |
| Sensitivity of reentrant driver localization to electrophysiological parameter variability in image-based computational models of persistent atrial fibrillation sustained by a fibrotic substrate. | Deng, Dongdong; Murphy, Michael J; Hakim, Joe B; Franceschi, William H; Zahid, Sohail; Pashakhanloo, Farhad; Trayanova, Natalia A; Boyle, Patrick M | Chaos (Woodbury, N.Y.). | 2017 Sep; | 28964164 | |
| Boosting the down-shifting luminescence of rare-earth nanocrystals for biological imaging beyond 1500?nm. | Zhong, Yeteng; Ma, Zhuoran; Zhu, Shoujun; Yue, Jingying; Zhang, Mingxi; Antaris, Alexander L; Yuan, Jie; Cui, Ran; Wan, Hao; Zhou, Ying; Wang, Weizhi; Huang, Ngan F; Luo, Jian; Hu, Zhiyuan; Dai, Hongjie | Nature communications. | 2017 09 29; | 28963467 | |
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| Closed-Loop Real-Time Imaging Enables Fully Automated Cell-Targeted Patch-Clamp Neural Recording In Vivo. | Suk, Ho-Jun; van Welie, Ingrid; Kodandaramaiah, Suhasa B; Allen, Brian; Forest, Craig R; Boyden, Edward S | Neuron. | 2017 Sep 27; | 28957673 | |
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| Evaluating Efficiencies of Dual AAV Approaches for Retinal Targeting. | Carvalho, Livia S; Turunen, Heikki T; Wassmer, Sarah J; Luna-Velez, María V; Xiao, Ru; Bennett, Jean; Vandenberghe, Luk H | Frontiers in neuroscience. | 2017; | 28943836 | |
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| Enhanced Nociception in Angelman Syndrome Model Mice. | McCoy, Eric S; Taylor-Blake, Bonnie; Aita, Megumi; Simon, Jeremy M; Philpot, Benjamin D; Zylka, Mark J | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2017 Oct 18; | 28931574 | |
| Estimation and Inference for the Mediation Proportion. | Nevo, Daniel; Liao, Xiaomei; Spiegelman, Donna | The international journal of biostatistics. | 2017 09 20; | 28930628 | |
| In Situ Super-Resolution Imaging of Genomic DNA with OligoSTORM and OligoDNA-PAINT. | Beliveau, Brian J; Boettiger, Alistair N; Nir, Guy; Bintu, Bogdan; Yin, Peng; Zhuang, Xiaowei; Wu, C-Ting | Methods in molecular biology (Clifton, N.J.). | ; | 28924672 | |
| Metabolic crosstalk regulates Porphyromonas gingivalis colonization and virulence during oral polymicrobial infection. | Kuboniwa, Masae; Houser, John R; Hendrickson, Erik L; Wang, Qian; Alghamdi, Samar A; Sakanaka, Akito; Miller, Daniel P; Hutcherson, Justin A; Wang, Tiansong; Beck, David A C; Whiteley, Marvin; Amano, Atsuo; Wang, Huizhi; Marcotte, Edward M; Hackett, Murray; Lamont, Richard J | Nature microbiology. | 2017 Nov; | 28924191 | |
| Tissue Engineering of 3D Organotypic Microtissues by Acoustic Assembly. | Zhu, Yuqing; Serpooshan, Vahid; Wu, Sean; Demirci, Utkan; Chen, Pu; Güven, Sinan | Methods in molecular biology (Clifton, N.J.). | ; | 28921421 | |
| mTOR Inhibition Restores Amino Acid Balance in Cells Dependent on Catabolism of Extracellular Protein. | Nofal, Michel; Zhang, Kevin; Han, Seunghun; Rabinowitz, Joshua D | Molecular cell. | 2017 Sep 21; | 28918901 | |
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| Selenocysteine tRNA[Ser]Sec, the Central Component of Selenoprotein Biosynthesis: Isolation, Identification, Modification, and Sequencing. | Carlson, Bradley A; Lee, Byeong Jae; Tsuji, Petra A; Copeland, Paul R; Schweizer, Ulrich; Gladyshev, Vadim N; Hatfield, Dolph L | Methods in molecular biology (Clifton, N.J.). | 2018; | 28917036 | |
| Chemical Basis for Deuterium Labeling of Fat and NADPH. | Zhang, Zhaoyue; Chen, Li; Liu, Ling; Su, Xiaoyang; Rabinowitz, Joshua D | Journal of the American Chemical Society. | 2017 Oct 18; | 28911221 | |
| Distinct roles for motor neuron autophagy early and late in the SOD1G93A mouse model of ALS. | Rudnick, Noam D; Griffey, Christopher J; Guarnieri, Paolo; Gerbino, Valeria; Wang, Xueyong; Piersaint, Jason A; Tapia, Juan Carlos; Rich, Mark M; Maniatis, Tom | Proceedings of the National Academy of Sciences of the United States of America. | 2017 Sep 26; | 28904095 | |
| SAM-dependent enzyme-catalysed pericyclic reactions in natural product biosynthesis. | Ohashi, Masao; Liu, Fang; Hai, Yang; Chen, Mengbin; Tang, Man-Cheng; Yang, Zhongyue; Sato, Michio; Watanabe, Kenji; Houk, K N; Tang, Yi | Nature. | 2017 Sep 28; | 28902839 | |
| Machine Learning Analysis Identifies Drosophila Grunge/Atrophin as an Important Learning and Memory Gene Required for Memory Retention and Social Learning. | Kacsoh, Balint Z; Greene, Casey S; Bosco, Giovanni | G3 (Bethesda, Md.). | 2017 Nov 06; | 28889104 | |
| Variant Interpretation: Functional Assays to the Rescue. | Starita, Lea M; Ahituv, Nadav; Dunham, Maitreya J; Kitzman, Jacob O; Roth, Frederick P; Seelig, Georg; Shendure, Jay; Fowler, Douglas M | American journal of human genetics. | 2017 Sep 07; | 28886340 | |
| CRISPR-Cas9 mediated one-step disabling of pancreatogenesis in pigs. | Wu, Jun; Vilarino, Marcela; Suzuki, Keiichiro; Okamura, Daiji; Bogliotti, Yanina Soledad; Park, Insung; Rowe, Joan; McNabb, Bret; Ross, Pablo Juan; Belmonte, Juan Carlos Izpisua | Scientific reports. | 2017 Sep 05; | 28874671 | |
| Localized CD47 blockade enhances immunotherapy for murine melanoma. | Ingram, Jessica R; Blomberg, Olga S; Sockolosky, Jonathan T; Ali, Lestat; Schmidt, Florian I; Pishesha, Novalia; Espinosa, Camilo; Dougan, Stephanie K; Garcia, K Christopher; Ploegh, Hidde L; Dougan, Michael | Proceedings of the National Academy of Sciences of the United States of America. | 2017 Sep 19; | 28874561 | |
| PhenoGraph and viSNE facilitate the identification of abnormal T-cell populations in routine clinical flow cytometric data. | DiGiuseppe, Joseph A; Cardinali, Jolene L; Rezuke, William N; Pe'er, Dana | Cytometry. Part B, Clinical cytometry. | 2017 Sep 02; | 28865188 | |
| Closed-Loop Real-Time Imaging Enables Fully Automated Cell-Targeted Patch-Clamp Neural Recording In Vivo. | Suk, Ho-Jun; van Welie, Ingrid; Kodandaramaiah, Suhasa B; Allen, Brian; Forest, Craig R; Boyden, Edward S | Neuron. | 2017 Aug 30; | 28858614 | |
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| Regulation by 3'-Untranslated Regions. | Mayr, Christine | Annual review of genetics. | ; | 28853924 | |
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| What is changing when: Decoding visual information in movies from human intracranial recordings. | Isik, Leyla; Singer, Jedediah; Madsen, Joseph R; Kanwisher, Nancy; Kreiman, Gabriel | NeuroImage. | 2017 Aug 18; | 28823828 | |
| Comprehensive single-cell transcriptional profiling of a multicellular organism. | Cao, Junyue; Packer, Jonathan S; Ramani, Vijay; Cusanovich, Darren A; Huynh, Chau; Daza, Riza; Qiu, Xiaojie; Lee, Choli; Furlan, Scott N; Steemers, Frank J; Adey, Andrew; Waterston, Robert H; Trapnell, Cole; Shendure, Jay | Science (New York, N.Y.). | 2017 08 18; | 28818938 | |
| Tissue-Resident Macrophages in Pancreatic Ductal Adenocarcinoma Originate from Embryonic Hematopoiesis and Promote Tumor Progression. | Zhu, Yu; Herndon, John M; Sojka, Dorothy K; Kim, Ki-Wook; Knolhoff, Brett L; Zuo, Chong; Cullinan, Darren R; Luo, Jingqin; Bearden, Audrey R; Lavine, Kory J; Yokoyama, Wayne M; Hawkins, William G; Fields, Ryan C; Randolph, Gwendalyn J; DeNardo, David G | Immunity. | 2017 08 15; | 28813661 | |
| Reversible Reaction-Based Fluorescent Probe for Real-Time Imaging of Glutathione Dynamics in Mitochondria. | Chen, Jianwei; Jiang, Xiqian; Zhang, Chengwei; MacKenzie, Kevin R; Stossi, Fabio; Palzkill, Timothy; Wang, Meng C; Wang, Jin | ACS sensors. | 2017 Sep 22; | 28809477 | |
| AAV-mediated direct in vivo CRISPR screen identifies functional suppressors in glioblastoma. | Chow, Ryan D; Guzman, Christopher D; Wang, Guangchuan; Schmidt, Florian; Youngblood, Mark W; Ye, Lupeng; Errami, Youssef; Dong, Matthew B; Martinez, Michael A; Zhang, Sensen; Renauer, Paul; Bilguvar, Kaya; Gunel, Murat; Sharp, Phillip A; Zhang, Feng; Platt, Randall J; Chen, Sidi | Nature neuroscience. | 2017 Oct; | 28805815 | |
| Sonofragmentation of Ultrathin 1D Nanomaterials. | Gao, Ruixuan; Gupta, Ishan; Boyden, Edward S | Particle & particle systems characterization : measurement and description of particle properties and behavior in powders and other disperse systems. | 2017 Jan; | 28804214 | |
| Distinct Cellular Mechanisms Underlie Anti-CTLA-4 and Anti-PD-1 Checkpoint Blockade. | Wei, Spencer C; Levine, Jacob H; Cogdill, Alexandria P; Zhao, Yang; Anang, Nana-Ama A S; Andrews, Miles C; Sharma, Padmanee; Wang, Jing; Wargo, Jennifer A; Pe'er, Dana; Allison, James P | Cell. | 2017 Sep 07; | 28803728 | |
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| Fate-Regulating Circuits in Viruses: From Discovery to New Therapy Targets. | Pai, Anand; Weinberger, Leor S | Annual review of virology. | 2017 Sep 29; | 28800289 | |
| Genome-scale activation screen identifies a lncRNA locus regulating a gene neighbourhood. | Joung, Julia; Engreitz, Jesse M; Konermann, Silvana; Abudayyeh, Omar O; Verdine, Vanessa K; Aguet, Francois; Gootenberg, Jonathan S; Sanjana, Neville E; Wright, Jason B; Fulco, Charles P; Tseng, Yuen-Yi; Yoon, Charles H; Boehm, Jesse S; Lander, Eric S; Zhang, Feng | Nature. | 2017 08 17; | 28792927 | |
| Space- and intensity-constrained reconstruction for compressed ultrafast photography. | Zhu, Liren; Chen, Yujia; Liang, Jinyang; Xu, Qiaofeng; Gao, Liang; Ma, Cheng; Wang, Lihong V | Optica. | 2016 Jul; | 28775997 | |
| A molecular signature for anastasis, recovery from the brink of apoptotic cell death. | Sun, Gongping; Guzman, Elmer; Balasanyan, Varuzhan; Conner, Christopher M; Wong, Kirsten; Zhou, Hongjun Robin; Kosik, Kenneth S; Montell, Denise J | The Journal of cell biology. | 2017 Oct 02; | 28768686 | |
| Neuronal Stimulation Triggers Neuronal Glycolysis and Not Lactate Uptake. | Díaz-García, Carlos Manlio; Mongeon, Rebecca; Lahmann, Carolina; Koveal, Dorothy; Zucker, Hannah; Yellen, Gary | Cell metabolism. | 2017 Aug 01; | 28768175 | |
| Ribosome Rescue Inhibitors Kill Actively Growing and Nonreplicating Persister Mycobacterium tuberculosis Cells. | Alumasa, John N; Manzanillo, Paolo S; Peterson, Nicholas D; Lundrigan, Tricia; Baughn, Anthony D; Cox, Jeffery S; Keiler, Kenneth C | ACS infectious diseases. | 2017 Sep 08; | 28762275 | |
| Implications of human genetic variation in CRISPR-based therapeutic genome editing. | Scott, David A; Zhang, Feng | Nature medicine. | 2017 Sep; | 28759051 | |
| Critical Comparison of FRET-Sensor Functionality in the Cytosol and Endoplasmic Reticulum and Implications for Quantification of Ions. | Carter, Kyle P; Carpenter, Margaret C; Fiedler, Brett; Jimenez, Ralph; Palmer, Amy E | Analytical chemistry. | 2017 Sep 05; | 28758723 | |
| AID Recognizes Structured DNA for Class Switch Recombination. | Qiao, Qi; Wang, Li; Meng, Fei-Long; Hwang, Joyce K; Alt, Frederick W; Wu, Hao | Molecular cell. | 2017 Aug 03; | 28757211 | |
| Expression and Purification of Active Recombinant Human Alpha-1 Antitrypsin (AAT) from Escherichia coli. | Krishnan, Beena; Hedstrom, Lizbeth; Hebert, Daniel N; Gierasch, Lila M; Gershenson, Anne | Methods in molecular biology (Clifton, N.J.). | 2017; | 28752459 | |
| Targeted DNA methylation in human cells using engineered dCas9-methyltransferases. | Xiong, Tina; Meister, Glenna E; Workman, Rachael E; Kato, Nathaniel C; Spellberg, Michael J; Turker, Fulya; Timp, Winston; Ostermeier, Marc; Novina, Carl D | Scientific reports. | 2017 Jul 27; | 28751638 | |
| ChromEMT: Visualizing 3D chromatin structure and compaction in interphase and mitotic cells. | Ou, Horng D; Phan, Sébastien; Deerinck, Thomas J; Thor, Andrea; Ellisman, Mark H; O'Shea, Clodagh C | Science (New York, N.Y.). | 2017 07 28; | 28751582 | |
| Multiview Hilbert transformation in full-ring transducer array-based photoacoustic computed tomography. | Li, Lei; Zhu, Liren; Shen, Yuecheng; Wang, Lihong V | Journal of biomedical optics. | 2017 07 01; | 28745385 | |
| Dynamic structure of locomotor behavior in walking fruit flies. | Katsov, Alexander Y; Freifeld, Limor; Horowitz, Mark; Kuehn, Seppe; Clandinin, Thomas R | eLife. | 2017 07 25; | 28742018 | |
| In Vivo Rescue of the Hematopoietic Niche By Pluripotent Stem Cell Complementation of Defective Osteoblast Compartments. | Chubb, Rhiannon; Oh, James; Riley, Alyssa K; Kimura, Takaharu; Wu, Sean M; Wu, Joy Y | Stem cells (Dayton, Ohio). | 2017 Oct; | 28741855 | |
| Identification of a hybrid myocardial zone in the mammalian heart after birth. | Tian, Xueying; Li, Yan; He, Lingjuan; Zhang, Hui; Huang, Xiuzhen; Liu, Qiaozhen; Pu, Wenjuan; Zhang, Libo; Li, Yi; Zhao, Huan; Wang, Zhifu; Zhu, Jianhong; Nie, Yu; Hu, Shengshou; Sedmera, David; Zhong, Tao P; Yu, Ying; Zhang, Li; Yan, Yan; Qiao, Zengyong; | Nature communications. | ; | 28729659 | |
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| Nanoscale imaging of clinical specimens using pathology-optimized expansion microscopy. | Zhao, Yongxin; Bucur, Octavian; Irshad, Humayun; Chen, Fei; Weins, Astrid; Stancu, Andreea L; Oh, Eun-Young; DiStasio, Marcello; Torous, Vanda; Glass, Benjamin; Stillman, Isaac E; Schnitt, Stuart J; Beck, Andrew H; Boyden, Edward S | Nature biotechnology. | 2017 Aug; | 28714966 | |
| Neural Circuit-Specialized Astrocytes: Transcriptomic, Proteomic, Morphological, and Functional Evidence. | Chai, Hua; Diaz-Castro, Blanca; Shigetomi, Eiji; Monte, Emma; Octeau, J Christopher; Yu, Xinzhu; Cohn, Whitaker; Rajendran, Pradeep S; Vondriska, Thomas M; Whitelegge, Julian P; Coppola, Giovanni; Khakh, Baljit S | Neuron. | 2017 Jul 11; | 28712653 | |
| Efficacy and safety of voretigene neparvovec (AAV2-hRPE65v2) in patients with RPE65-mediated inherited retinal dystrophy: a randomised, controlled, open-label, phase 3 trial. | Russell, Stephen; Bennett, Jean; Wellman, Jennifer A; Chung, Daniel C; Yu, Zi-Fan; Tillman, Amy; Wittes, Janet; Pappas, Julie; Elci, Okan; McCague, Sarah; Cross, Dominique; Marshall, Kathleen A; Walshire, Jean; Kehoe, Taylor L; Reichert, Hannah; Davis, Maria; Raffini, Leslie; George, Lindsey A; Hudson, F Parker; Dingfield, Laura; Zhu, Xiaosong; Haller, Julia A; Sohn, Elliott H; Mahajan, Vinit B; Pfeifer, Wanda; Weckmann, Michelle; Johnson, Chris; Gewaily, Dina; Drack, Arlene; Stone, Edwin; Wachtel, Katie; Simonelli, Francesca; Leroy, Bart P; Wright, J Fraser; High, Katherine A; Maguire, Albert M | Lancet (London, England). | 2017 Aug 26; | 28712537 | |
| CRISPR/Cas9-Mediated Scanning for Regulatory Elements Required for HPRT1 Expression via Thousands of Large, Programmed Genomic Deletions. | Gasperini, Molly; Findlay, Gregory M; McKenna, Aaron; Milbank, Jennifer H; Lee, Choli; Zhang, Melissa D; Cusanovich, Darren A; Shendure, Jay | American journal of human genetics. | 2017 Aug 03; | 28712454 | |
| Translation fidelity coevolves with longevity. | Ke, Zhonghe; Mallik, Pramit; Johnson, Adam B; Luna, Facundo; Nevo, Eviatar; Zhang, Zhengdong D; Gladyshev, Vadim N; Seluanov, Andrei; Gorbunova, Vera | Aging cell. | 2017 Oct; | 28707419 | |
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| Novel mobility test to assess functional vision in patients with inherited retinal dystrophies. | Chung, Daniel C; McCague, Sarah; Yu, Zi-Fan; Thill, Satha; DiStefano-Pappas, Julie; Bennett, Jean; Cross, Dominique; Marshall, Kathleen; Wellman, Jennifer; High, Katherine A | Clinical & experimental ophthalmology. | 2017 Jul 11; | 28697537 | |
| Thermoneutrality but not UCP1 Deficiency Suppresses Monocyte Mobilization into Blood. | Williams, Jesse W; Elvington, Andrew F; Ivanov, Stoyan; Kessler, Skyler; Luehmann, Hannah; Baba, Osamu; Saunders, Brian T; Kim, Ki-Wook; Johnson, Michael W; Craft, Clarissa S; Choi, Jae-Hoon; Sorci-Thomas, Mary G; Zinselmeyer, Bernd H; Brestoff, Jonathan | Circulation research. | 2017 Jul 10; | 28696252 | |
| Imaging-Based Simulations for Predicting Sudden Death and Guiding Ventricular Tachycardia Ablation. | Trayanova, Natalia A; Pashakhanloo, Farhad; Wu, Katherine C; Halperin, Henry R | Circulation. Arrhythmia and electrophysiology. | 2017 Jul; | 28696219 | |
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| Metabolic labeling in middle-down proteomics allows for investigation of the dynamics of the histone code. | Sidoli, Simone; Lu, Congcong; Coradin, Mariel; Wang, Xiaoshi; Karch, Kelly R; Ruminowicz, Chrystian; Garcia, Benjamin A | Epigenetics & chromatin. | 2017 Jul 06; | 28683815 | |
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| Predicting the response to CTLA-4 blockade by longitudinal noninvasive monitoring of CD8 T cells. | Rashidian, Mohammad; Ingram, Jessica R; Dougan, Michael; Dongre, Anushka; Whang, Katherine A; LeGall, Camille; Cragnolini, Juan J; Bierie, Brian; Gostissa, Monica; Gorman, James; Grotenbreg, Gijsbert M; Bhan, Atul; Weinberg, Robert A; Ploegh, Hidde L | The Journal of experimental medicine. | 2017 Aug 07; | 28666979 | |
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| Myofilament protein dynamics modulate EAD formation in human hypertrophic cardiomyopathy. | Zile, Melanie A; Trayanova, Natalia A | Progress in biophysics and molecular biology. | 2017 Nov; | 28648627 | |
| High-resolution deep functional imaging of the whole mouse brain by photoacoustic computed tomography in?vivo. | Zhang, Pengfei; Li, Lei; Lin, Li; Hu, Peng; Shi, Junhui; He, Yun; Zhu, Liren; Zhou, Yong; Wang, Lihong V | Journal of biophotonics. | 2017 Jun 21; | 28635056 | |
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| Microbial Genetic Composition Tunes Host Longevity. | Han, Bing; Sivaramakrishnan, Priya; Lin, Chih-Chun J; Neve, Isaiah A A; He, Jingquan; Tay, Li Wei Rachel; Sowa, Jessica N; Sizovs, Antons; Du, Guangwei; Wang, Jin; Herman, Christophe; Wang, Meng C | Cell. | 2017 Jun 15; | 28622510 | |
| Structure and Dynamics of RNA Repeat Expansions That Cause Huntington's Disease and Myotonic Dystrophy Type 1. | Chen, Jonathan L; VanEtten, Damian M; Fountain, Matthew A; Yildirim, Ilyas; Disney, Matthew D | Biochemistry. | 2017 07 11; | 28617590 | |
| Identification and Heterologous Production of a Benzoyl-Primed Tricarboxylic Acid Polyketide Intermediate from the Zaragozic Acid A Biosynthetic Pathway. | Liu, Nicholas; Hung, Yiu-Sun; Gao, Shu-Shan; Hang, Leibniz; Zou, Yi; Chooi, Yit-Heng; Tang, Yi | Organic letters. | 2017 Jul 07; | 28605916 | |
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| Noninvasive Deep Brain Stimulation via Temporally Interfering Electric Fields. | Grossman, Nir; Bono, David; Dedic, Nina; Kodandaramaiah, Suhasa B; Rudenko, Andrii; Suk, Ho-Jun; Cassara, Antonino M; Neufeld, Esra; Kuster, Niels; Tsai, Li-Huei; Pascual-Leone, Alvaro; Boyden, Edward S | Cell. | 2017 Jun 01; | 28575667 | |
| Mesoscale-duration activated states gate spiking in response to fast rises in membrane voltage in the awake brain. | Singer, Annabelle C; Talei Franzesi, Giovanni; Kodandaramaiah, Suhasa B; Flores, Francisco J; Cohen, Jeremy D; Lee, Albert K; Börgers, Christoph; Forest, Craig R; Kopell, Nancy J; Boyden, Edward S | Journal of neurophysiology. | 2017 May 31; | 28566460 | |
| Fast label-free multilayered histology-like imaging of human breast cancer by photoacoustic microscopy. | Wong, Terence T W; Zhang, Ruiying; Hai, Pengfei; Zhang, Chi; Pleitez, Miguel A; Aft, Rebecca L; Novack, Deborah V; Wang, Lihong V | Science advances. | 2017 May; | 28560329 | |
| The autism-linked UBE3A T485A mutant E3 ubiquitin ligase activates the Wnt/?-catenin pathway by inhibiting the proteasome. | Yi, Jason J; Paranjape, Smita R; Walker, Matthew P; Choudhury, Rajarshi; Wolter, Justin M; Fragola, Giulia; Emanuele, Michael J; Major, Michael B; Zylka, Mark J | The Journal of biological chemistry. | 2017 May 30; | 28559284 | |
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| Inference and Evolutionary Analysis of Genome-Scale Regulatory Networks in Large Phylogenies. | Koch, Christopher; Konieczka, Jay; Delorey, Toni; Lyons, Ana; Socha, Amanda; Davis, Kathleen; Knaack, Sara A; Thompson, Dawn; O'Shea, Erin K; Regev, Aviv; Roy, Sushmita | Cell systems. | 2017 May 24; | 28544882 | |
| Systems-wide Studies Uncover Commander, a Multiprotein Complex Essential to Human Development. | Mallam, Anna L; Marcotte, Edward M | Cell systems. | 2017 May 24; | 28544880 | |
| An American Crisis: the Lack of Black Men in Medicine. | Laurencin, Cato T; Murray, Marsha | Journal of racial and ethnic health disparities. | 2017 Jun; | 28534304 | |
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| CaMKII Autophosphorylation Is Necessary for Optimal Integration of Ca(2+) Signals during LTP Induction, but Not Maintenance. | Chang, Jui-Yun; Parra-Bueno, Paula; Laviv, Tal; Szatmari, Erzsebet M; Lee, Seok-Jin R; Yasuda, Ryohei | Neuron. | 2017 May 17; | 28521133 | |
| Mechanism of the P450-Catalyzed Oxidative Cyclization in the Biosynthesis of Griseofulvin. | Grandner, Jessica M; Cacho, Ralph A; Tang, Yi; Houk, K N | ACS catalysis. | 2016 Jul 01; | 28503354 | |
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| BLISS is a versatile and quantitative method for genome-wide profiling of DNA double-strand breaks. | Yan, Winston X; Mirzazadeh, Reza; Garnerone, Silvano; Scott, David; Schneider, Martin W; Kallas, Tomasz; Custodio, Joaquin; Wernersson, Erik; Li, Yinqing; Gao, Linyi; Federova, Yana; Zetsche, Bernd; Zhang, Feng; Bienko, Magda; Crosetto, Nicola | Nature communications. | 2017 May 12; | 28497783 | |
| Whole-brain serial-section electron microscopy in larval zebrafish. | Hildebrand, David Grant Colburn; Cicconet, Marcelo; Torres, Russel Miguel; Choi, Woohyuk; Quan, Tran Minh; Moon, Jungmin; Wetzel, Arthur Willis; Scott Champion, Andrew; Graham, Brett Jesse; Randlett, Owen; Plummer, George Scott; Portugues, Ruben; Bianco, Isaac Henry; Saalfeld, Stephan; Baden, Alexander David; Lillaney, Kunal; Burns, Randal; Vogelstein, Joshua Tzvi; Schier, Alexander Franz; Lee, Wei-Chung Allen; Jeong, Won-Ki; Lichtman, Jeff William; Engert, Florian | Nature. | 2017 05 18; | 28489821 | |
| Native and engineered sensors for Ca2+ and Zn2+: lessons from calmodulin and MTF1. | Carpenter, Margaret C; Palmer, Amy E | Essays in biochemistry. | 2017 05 09; | 28487400 | |
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| Cholesterol Accumulation in Dendritic Cells Links the Inflammasome to Acquired Immunity. | Westerterp, Marit; Gautier, Emmanuel L; Ganda, Anjali; Molusky, Matthew M; Wang, Wei; Fotakis, Panagiotis; Wang, Nan; Randolph, Gwendalyn J; D'Agati, Vivette D; Yvan-Charvet, Laurent; Tall, Alan R | Cell metabolism. | 2017 Jun 06; | 28479366 | |
| Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses. | Lavin, Yonit; Kobayashi, Soma; Leader, Andrew; Amir, El-Ad David; Elefant, Naama; Bigenwald, Camille; Remark, Romain; Sweeney, Robert; Becker, Christian D; Levine, Jacob H; Meinhof, Klaus; Chow, Andrew; Kim-Shulze, Seunghee; Wolf, Andrea; Medaglia, Chiara | Cell. | 2017 May 04; | 28475900 | |
| An Immune Atlas of Clear Cell Renal Cell Carcinoma. | Chevrier, Stéphane; Levine, Jacob Harrison; Zanotelli, Vito Riccardo Tomaso; Silina, Karina; Schulz, Daniel; Bacac, Marina; Ries, Carola Hermine; Ailles, Laurie; Jewett, Michael Alexander Spencer; Moch, Holger; van den Broek, Maries; Beisel, Christian; St | Cell. | 2017 May 04; | 28475899 | |
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| Spatially Adaptive Multi-Scale Optimization for Local Parameter Estimation in Cardiac Electrophysiology. | Dhamala, Jwala; Arevalo, Hermenegild J; Sapp, John; Horacek, Milan; Wu, Katherine C; Trayanova, Natalia A; Wang, Linwei | IEEE transactions on medical imaging. | 2017 09; | 28459685 | |
| CIRCLE-seq: a highly sensitive in vitro screen for genome-wide CRISPR-Cas9 nuclease off-targets. | Tsai, Shengdar Q; Nguyen, Nhu T; Malagon-Lopez, Jose; Topkar, Ved V; Aryee, Martin J; Joung, J Keith | Nature methods. | 2017 Jun; | 28459458 | |
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| Cell diversity and network dynamics in photosensitive human brain organoids. | Quadrato, Giorgia; Nguyen, Tuan; Macosko, Evan Z; Sherwood, John L; Min Yang, Sung; Berger, Daniel R; Maria, Natalie; Scholvin, Jorg; Goldman, Melissa; Kinney, Justin P; Boyden, Edward S; Lichtman, Jeff W; Williams, Ziv M; McCarroll, Steven A; Arlotta, Paola | Nature. | 2017 May 04; | 28445462 | |
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| Epithelial-to-Mesenchymal Transition Contributes to Immunosuppression in Breast Carcinomas. | Dongre, Anushka; Rashidian, Mohammad; Reinhardt, Ferenc; Bagnato, Aaron; Keckesova, Zuzana; Ploegh, Hidde L; Weinberg, Robert A | Cancer research. | 2017 Aug 01; | 28428275 | |
| Super-multiplex vibrational imaging. | Wei, Lu; Chen, Zhixing; Shi, Lixue; Long, Rong; Anzalone, Andrew V; Zhang, Luyuan; Hu, Fanghao; Yuste, Rafael; Cornish, Virginia W; Min, Wei | Nature. | 2017 Apr 27; | 28424513 | |
| Human umbilical cord plasma proteins revitalize hippocampal function in aged mice. | Castellano, Joseph M; Mosher, Kira I; Abbey, Rachelle J; McBride, Alisha A; James, Michelle L; Berdnik, Daniela; Shen, Jadon C; Zou, Bende; Xie, Xinmin S; Tingle, Martha; Hinkson, Izumi V; Angst, Martin S; Wyss-Coray, Tony | Nature. | 2017 04 27; | 28424512 | |
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| Blood-Brain Barrier Permeability Is Regulated by Lipid Transport-Dependent Suppression of Caveolae-Mediated Transcytosis. | Andreone, Benjamin J; Chow, Brian Wai; Tata, Aleksandra; Lacoste, Baptiste; Ben-Zvi, Ayal; Bullock, Kevin; Deik, Amy A; Ginty, David D; Clish, Clary B; Gu, Chenghua | Neuron. | 2017 Apr 11; | 28416077 | |
| Camptothecin resistance is determined by the regulation of topoisomerase I degradation mediated by ubiquitin proteasome pathway. | Ando, Koji; Shah, Ankur K; Sachdev, Vibhu; Kleinstiver, Benjamin P; Taylor-Parker, Julian; Welch, Moira M; Hu, Yiheng; Salgia, Ravi; White, Forest M; Parvin, Jeffrey D; Ozonoff, Al; Rameh, Lucia E; Joung, J Keith; Bharti, Ajit K | Oncotarget. | 2017 Jul 04; | 28415827 | |
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| Single-cell whole-genome analyses by Linear Amplification via Transposon Insertion (LIANTI). | Chen, Chongyi; Xing, Dong; Tan, Longzhi; Li, Heng; Zhou, Guangyu; Huang, Lei; Xie, X Sunney | Science (New York, N.Y.). | 2017 Apr 14; | 28408603 | |
| The Landscape Ecology and Microbiota of the Human Nose, Mouth, and Throat. | Proctor, Diana M; Relman, David A | Cell host & microbe. | 2017 Apr 12; | 28407480 | |
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| Chd8 Mutation Leads to Autistic-like Behaviors and Impaired Striatal Circuits. | Platt, Randall J; Zhou, Yang; Slaymaker, Ian M; Shetty, Ashwin S; Weisbach, Niels R; Kim, Jin-Ah; Sharma, Jitendra; Desai, Mitul; Sood, Sabina; Kempton, Hannah R; Crabtree, Gerald R; Feng, Guoping; Zhang, Feng | Cell reports. | 2017 Apr 11; | 28402856 | |
| The impact of common dopamine D2 receptor gene polymorphisms on D2/3 receptor availability: C957T as a key determinant in putamen and ventral striatum. | Smith, C T; Dang, L C; Buckholtz, J W; Tetreault, A M; Cowan, R L; Kessler, R M; Zald, D H | Translational psychiatry. | 2017 Apr 11; | 28398340 | |
| Vesicular stomatitis virus N protein-specific single-domain antibody fragments inhibit replication. | Hanke, Leo; Schmidt, Florian I; Knockenhauer, Kevin E; Morin, Benjamin; Whelan, Sean Pj; Schwartz, Thomas U; Ploegh, Hidde L | EMBO reports. | 2017 Jun; | 28396572 | |
| Taking Stock of Retinal Gene Therapy: Looking Back and Moving Forward. | Bennett, Jean | Molecular therapy : the journal of the American Society of Gene Therapy. | 2017 May 03; | 28391961 | |
| Contractile force generation by 3D hiPSC-derived cardiac tissues is enhanced by rapid establishment of cellular interconnection in matrix with muscle-mimicking stiffness. | Lee, Soah; Serpooshan, Vahid; Tong, Xinming; Venkatraman, Sneha; Lee, Meelim; Lee, Jaecheol; Chirikian, Orlando; Wu, Joseph C; Wu, Sean M; Yang, Fan | Biomaterials. | 2017 Jul; | 28384492 | |
| Altered Cortical Ensembles in Mouse Models of Schizophrenia. | Hamm, Jordan P; Peterka, Darcy S; Gogos, Joseph A; Yuste, Rafael | Neuron. | 2017 Apr 05; | 28384469 | |
| Using DNA Methylation Profiling to Evaluate Biological Age and Longevity Interventions. | Petkovich, Daniel A; Podolskiy, Dmitriy I; Lobanov, Alexei V; Lee, Sang-Goo; Miller, Richard A; Gladyshev, Vadim N | Cell metabolism. | ; | 28380383 | |
| Understanding CARD Tricks in Apoptosomes. | Wang, Li; Qiao, Qi; Wu, Hao | Structure (London, England : 1993). | 2017 Apr 04; | 28380338 | |
| Mono-unsaturated fatty acids link H3K4me3 modifiers to C. elegans lifespan. | Han, Shuo; Schroeder, Elizabeth A; Silva-García, Carlos G; Hebestreit, Katja; Mair, William B; Brunet, Anne | Nature. | 2017 Apr 13; | 28379943 | |
| Bioacoustic-enabled patterning of human iPSC-derived cardiomyocytes into 3D cardiac tissue. | Serpooshan, Vahid; Chen, Pu; Wu, Haodi; Lee, Soah; Sharma, Arun; Hu, Daniel A; Venkatraman, Sneha; Ganesan, Adarsh Venkataraman; Usta, Osman Berk; Yarmush, Martin; Yang, Fan; Wu, Joseph C; Demirci, Utkan; Wu, Sean M | Biomaterials. | ; | 28376365 | |
| Selective Enzymatic Demethylation of N2 ,N2 -Dimethylguanosine in RNA and Its Application in High-Throughput tRNA Sequencing. | Dai, Qing; Zheng, Guanqun; Schwartz, Michael H; Clark, Wesley C; Pan, Tao | Angewandte Chemie (International ed. in English). | 2017 Apr 24; | 28371071 | |
| Glial Calcium Waves are Triggered by Seizure Activity and Not Essential for Initiating Ictal Onset or Neurovascular Coupling. | Baird-Daniel, Eliza; Daniel, Andy G S; Wenzel, Michael; Li, Dan; Liou, Jyun-You; Laffont, Philippe; Zhao, Mingrui; Yuste, Rafael; Ma, Hongtao; Schwartz, Theodore H | Cerebral cortex (New York, N.Y. : 1991). | 2017 06 01; | 28369176 | |
| Non-overlapping Neural Networks in Hydra vulgaris. | Dupre, Christophe; Yuste, Rafael | Current biology : CB. | 2017 Apr 24; | 28366745 | |
| Collaborative Biosynthesis of Maleimide- and Succinimide-Containing Natural Products by Fungal Polyketide Megasynthases. | Sato, Michio; Dander, Jacob E; Sato, Chizuru; Hung, Yiu-Sun; Gao, Shu-Shan; Tang, Man-Cheng; Hang, Leibniz; Winter, Jaclyn M; Garg, Neil K; Watanabe, Kenji; Tang, Yi | Journal of the American Chemical Society. | 2017 Apr 19; | 28365998 | |
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| Exosome-associated AAV2 vector mediates robust gene delivery into the murine retina upon intravitreal injection. | Wassmer, Sarah J; Carvalho, Livia S; György, Bence; Vandenberghe, Luk H; Maguire, Casey A | Scientific reports. | 2017 Mar 31; | 28361998 | |
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| SMARCAD1 Contributes to the Regulation of Naive Pluripotency by Interacting with Histone Citrullination. | Xiao, Shu; Lu, Jia; Sridhar, Bharat; Cao, Xiaoyi; Yu, Pengfei; Zhao, Tianyi; Chen, Chieh-Chun; McDee, Darina; Sloofman, Laura; Wang, Yang; Rivas-Astroza, Marcelo; Telugu, Bhanu Prakash V L; Levasseur, Dana; Zhang, Kang; Liang, Han; Zhao, Jing Crystal; Tanaka, Tetsuya S; Stormo, Gary; Zhong, Sheng | Cell reports. | 2017 Mar 28; | 28355564 | |
| High-numerical-aperture cryogenic light microscopy for increased precision of superresolution reconstructions. | Nahmani, Marc; Lanahan, Conor; DeRosier, David; Turrigiano, Gina G | Proceedings of the National Academy of Sciences of the United States of America. | 2017 Apr 11; | 28348224 | |
| Potential energy landscapes identify the information-theoretic nature of the epigenome. | Jenkinson, Garrett; Pujadas, Elisabet; Goutsias, John; Feinberg, Andrew P | Nature genetics. | 2017 May; | 28346445 | |
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| Intra-Cluster Correlation Estimates for HIV-related Outcomes from Care and Treatment Clinics in Dar es Salaam, Tanzania. | Barnhart, Dale; Hertzmark, Ellen; Liu, Enju; Mungure, Ester; Muya, Aisa N; Sando, David; Chalamilla, Guerino; Ulenga, Nzovu; Bärnighausen, Till; Fawzi, Wafaie; Spiegelman, Donna | Contemporary clinical trials communications. | 2016 Dec 15; | 27766318 | |
| Evaluation of Dose and Safety of AAV7m8 and AAV8BP2 in the Non-Human Primate Retina. | Ramachandran, Pavitra S; Lee, Vivian; Wei, Zhangyong; Song, Ji Yun; Casal, Giulia; Cronin, Therese; Willett, Keirnan; Huckfeldt, Rachel; Morgan, Jessica I W; Aleman, Tomas S; Maguire, Albert M; Bennett, Jean | Human gene therapy. | 2017 Feb; | 27750461 | |
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| Lymphoid Aggregates Remodel Lymphatic Collecting Vessels that Serve Mesenteric Lymph Nodes in Crohn Disease. | Randolph, Gwendalyn J; Bala, Shashi; Rahier, Jean-François; Johnson, Michael W; Wang, Peter L; Nalbantoglu, ILKe; Dubuquoy, Laurent; Chau, Amélie; Pariente, Benjamin; Kartheuser, Alex; Zinselmeyer, Bernd H; Colombel, Jean-Frederic | The American journal of pathology. | 2016 Dec; | 27746181 | |
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| Astrocyte scar formation aids central nervous system axon regeneration. | Anderson, Mark A; Burda, Joshua E; Ren, Yilong; Ao, Yan; O'Shea, Timothy M; Kawaguchi, Riki; Coppola, Giovanni; Khakh, Baljit S; Deming, Timothy J; Sofroniew, Michael V | Nature. | 2016 Apr 14; | 27027288 | |
| Cooperative Subnetworks of Molecularly Similar Interneurons in Mouse Neocortex. | Karnani, Mahesh M; Jackson, Jesse; Ayzenshtat, Inbal; Tucciarone, Jason; Manoocheri, Kasra; Snider, William G; Yuste, Rafael | Neuron. | 2016 Apr 6; | 27021171 | |
| Opening Holes in the Blanket of Inhibition: Localized Lateral Disinhibition by VIP Interneurons. | Karnani, Mahesh M; Jackson, Jesse; Ayzenshtat, Inbal; Hamzehei Sichani, Azadeh; Manoocheri, Kasra; Kim, Samuel; Yuste, Rafael | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Mar 23; | 27013676 | |
| Dysfunctional Calcium and Glutamate Signaling in Striatal Astrocytes from Huntington's Disease Model Mice. | Jiang, Ruotian; Diaz-Castro, Blanca; Looger, Loren L; Khakh, Baljit S | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Mar 23; | 27013675 | |
| Exploring Polypharmacology in Drug Discovery and Repurposing Using the CANDO Platform. | Chopra, Gaurav; Samudrala, Ram | Current pharmaceutical design. | 2016; | 27013226 | |
| Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion. | Dunn, Timothy W; Mu, Yu; Narayan, Sujatha; Randlett, Owen; Naumann, Eva A; Yang, Chao-Tsung; Schier, Alexander F; Freeman, Jeremy; Engert, Florian; Ahrens, Misha B | eLife. | 2016 Mar 22; | 27003593 | |
| CCR7 and IRF4-dependent dendritic cells regulate lymphatic collecting vessel permeability. | Ivanov, Stoyan; Scallan, Joshua P; Kim, Ki-Wook; Werth, Kathrin; Johnson, Michael W; Saunders, Brian T; Wang, Peter L; Kuan, Emma L; Straub, Adam C; Ouhachi, Melissa; Weinstein, Erica G; Williams, Jesse W; Briseño, Carlos; Colonna, Marco; Isakson, Brant E | The Journal of clinical investigation. | 2016 Apr 1; | 26999610 | |
| A role for the bacterial GATC methylome in antibiotic stress survival. | Cohen, Nadia R; Ross, Christian A; Jain, Saloni; Shapiro, Rebecca S; Gutierrez, Arnaud; Belenky, Peter; Li, Hu; Collins, James J | Nature genetics. | 2016 05; | 26998690 | |
| Regenerative Engineering of Cartilage Using Adipose-Derived Stem Cells. | Kasir, Rafid; Vernekar, Varadraj N; Laurencin, Cato T | Regenerative engineering and translational medicine. | 2015 Dec 1; | 26998511 | |
| Physostigmine and Methylphenidate Induce Distinct Arousal States During Isoflurane General Anesthesia in Rats. | Kenny, Jonathan D; Chemali, Jessica J; Cotten, Joseph F; Van Dort, Christa J; Kim, Seong-Eun; Ba, Demba; Taylor, Norman E; Brown, Emery N; Solt, Ken | Anesthesia and analgesia. | 2016 Mar 17; | 26991753 | |
| REGENERATIVE ENGINEERING: APPROACHES TO LIMB REGENERATION AND OTHER GRAND CHALLENGES. | Laurencin, Cato T; Nair, Lakshmi S | Regenerative engineering and translational medicine. | 2015 Apr 1; | 26985451 | |
| Phenalenone Polyketide Cyclization Catalyzed by Fungal Polyketide Synthase and Flavin-Dependent Monooxygenase. | Gao, Shu-Shan; Duan, Abing; Xu, Wei; Yu, Peiyuan; Hang, Leibniz; Houk, K N; Tang, Yi | Journal of the American Chemical Society. | 2016 Mar 22; | 26978228 | |
| Focusing light through scattering media by full-polarization digital optical phase conjugation. | Shen, Yuecheng; Liu, Yan; Ma, Cheng; Wang, Lihong V | Optics letters. | 2016 Mar 15; | 26977651 | |
| Hybrid Microscopy: Enabling Inexpensive High-Performance Imaging through Combined Physical and Optical Magnifications. | Zhang, Yu Shrike; Chang, Jae-Byum; Alvarez, Mario Moisés; Trujillo-de Santiago, Grissel; Aleman, Julio; Batzaya, Byambaa; Krishnadoss, Vaishali; Ramanujam, Aishwarya Aravamudhan; Kazemzadeh-Narbat, Mehdi; Chen, Fei; Tillberg, Paul W; Dokmeci, Mehmet Remzi | Scientific reports. | 2016; | 26975883 | |
| Spike sorting for large, dense electrode arrays. | Rossant, Cyrille; Kadir, Shabnam N; Goodman, Dan F M; Schulman, John; Hunter, Maximilian L D; Saleem, Aman B; Grosmark, Andres; Belluscio, Mariano; Denfield, George H; Ecker, Alexander S; Tolias, Andreas S; Solomon, Samuel; Buzsaki, Gyorgy; Carandini, Matteo; Harris, Kenneth D | Nature neuroscience. | 2016 Apr; | 26974951 | |
| Calcium imaging of neural circuits with extended depth-of-field light-sheet microscopy. | Quirin, Sean; Vladimirov, Nikita; Yang, Chao-Tsung; Peterka, Darcy S; Yuste, Rafael; B Ahrens, Misha | Optics letters. | 2016 Mar 1; | 26974063 | |
| Opportunities in the design and application of RNA for gene expression control. | McKeague, Maureen; Wong, Remus S; Smolke, Christina D | Nucleic acids research. | 2016 Apr 20; | 26969733 | |
| P450-Mediated Coupling of Indole Fragments To Forge Communesin and Unnatural Isomers. | Lin, Hsiao-Ching; McMahon, Travis C; Patel, Ashay; Corsello, Michael; Simon, Adam; Xu, Wei; Zhao, Muxun; Houk, K N; Garg, Neil K; Tang, Yi | Journal of the American Chemical Society. | 2016 Mar 18; | 26963294 | |
| VIP+ interneurons control neocortical activity across brain states. | Jackson, Jesse; Ayzenshtat, Inbal; Karnani, Mahesh M; Yuste, Rafael | Journal of neurophysiology. | 2016 Jun 1; | 26961109 | |
| Combinatorial Generation of Chemical Diversity by Redox Enzymes in Chaetoviridin Biosynthesis. | Sato, Michio; Winter, Jaclyn M; Kishimoto, Shinji; Noguchi, Hiroshi; Tang, Yi; Watanabe, Kenji | Organic letters. | 2016 Mar 18; | 26959241 | |
| Biosynthesis of the ?-nitro-containing cyclic tripeptide psychrophilin. | Zhao, Muxun; Lin, Hsiao-Ching; Tang, Yi | The Journal of antibiotics. | 2016 Jul; | 26956794 | |
| The use of (18)F-2-fluorodeoxyglucose (FDG) to label antibody fragments for immuno-PET of pancreatic cancer. | Rashidian, Mohammad; Keliher, Edmund; Dougan, Michael; Juras, Patrick K; Cavallari, Marco; Wojtkiewicz, Gregory R; Jacobsen, Johanne; Edens, Jerre G; Tas, Jeroen M G; Victora, Gabriel; Weissleder, Ralph; Ploegh, Hidde | ACS central science. | 2015 Jun 24; | 26955657 | |
| Using synthetic biology to make cells tomorrow's test tubes. | Garcia, Hernan G; Brewster, Robert C; Phillips, Rob | Integrative biology : quantitative biosciences from nano to macro. | 2016 Apr 18; | 26952708 | |
| Crystal structure of a substrate-engaged SecY protein-translocation channel. | Li, Long; Park, Eunyong; Ling, JingJing; Ingram, Jessica; Ploegh, Hidde; Rapoport, Tom A | Nature. | 2016 Mar 17; | 26950603 | |
| Novel Dopamine Therapeutics for Cognitive Deficits in Schizophrenia. | Arnsten, Amy F T; Girgis, Ragy R; Gray, David L; Mailman, Richard B | Biological psychiatry. | 2016 Jan 18; | 26946382 | |
| Neurovascular and Immuno-Imaging: From Mechanisms to Therapies. Proceedings of the Inaugural Symposium. | Akassoglou, Katerina; Agalliu, Dritan; Chang, Christopher J; Davalos, Dimitrios; Grutzendler, Jaime; Hillman, Elizabeth M C; Khakh, Baljit S; Kleinfeld, David; McGavern, Dorian B; Nelson, Sarah J; Zlokovic, Berislav V | Frontiers in neuroscience. | 2016; | 26941593 | |
| Opsin spectral sensitivity determines the effectiveness of optogenetic termination of ventricular fibrillation in the human heart: A simulation study. | Karathanos, Thomas V; Bayer, Jason D; Wang, Dafang; Boyle, Patrick M; Trayanova, Natalia A | The Journal of physiology. | 2016 Mar 4; | 26941055 | |
| Wireless Cortical Brain-Machine Interface for Whole-Body Navigation in Primates. | Rajangam, Sankaranarayani; Tseng, Po-He; Yin, Allen; Lehew, Gary; Schwarz, David; Lebedev, Mikhail A; Nicolelis, Miguel A L | Scientific reports. | 2016; | 26938468 | |
| Assembly and operation of the autopatcher for automated intracellular neural recording in vivo. | Kodandaramaiah, Suhasa B; Holst, Gregory L; Wickersham, Ian R; Singer, Annabelle C; Franzesi, Giovanni Talei; McKinnon, Michael L; Forest, Craig R; Boyden, Edward S | Nature protocols. | 2016 Apr; | 26938115 | |
| UVnovo: A de Novo Sequencing Algorithm Using Single Series of Fragment Ions via Chromophore Tagging and 351 nm Ultraviolet Photodissociation Mass Spectrometry. | Robotham, Scott A; Horton, Andrew P; Cannon, Joe R; Cotham, Victoria C; Marcotte, Edward M; Brodbelt, Jennifer S | Analytical chemistry. | 2016 Apr 5; | 26938041 | |
| Reactivation of Latent HIV-1 Expression by Engineered TALE Transcription Factors. | Perdigão, Pedro; Gaj, Thomas; Santa-Marta, Mariana; Barbas 3rd, Carlos F; Goncalves, Joao | PloS one. | 2016; | 26933881 | |
| An automatic experimental apparatus to study arm reaching in New World monkeys. | Yin, Allen; An, Jehi; Lehew, Gary; Lebedev, Mikhail A; Nicolelis, Miguel A L | Journal of neuroscience methods. | 2016 May 1; | 26928257 | |
| Frequency fluctuations in silicon nanoresonators. | Sansa, Marc; Sage, Eric; Bullard, Elizabeth C; Gély, Marc; Alava, Thomas; Colinet, Eric; Naik, Akshay K; Villanueva, Luis Guillermo; Duraffourg, Laurent; Roukes, Michael L; Jourdan, Guillaume; Hentz, Sébastien | Nature nanotechnology. | 2016 Jun; | 26925826 | |
| Intravenous immune globulin suppresses angiogenesis in mice and humans. | Yasuma, Reo; Cicatiello, Valeria; Mizutani, Takeshi; Tudisco, Laura; Kim, Younghee; Tarallo, Valeria; Bogdanovich, Sasha; Hirano, Yoshio; Kerur, Nagaraj; Li, Shengjian; Yasuma, Tetsuhiro; Fowler, Benjamin J; Wright, Charles B; Apicella, Ivana; Greco, Adelaide; Brunetti, Arturo; Ambati, Balamurali K; Helmers, Sevim Barbasso; Lundberg, Ingrid E; Viklicky, Ondrej; Leusen, Jeanette Hw; Verbeek, J Sjef; Gelfand, Bradley D; Bastos-Carvalho, Ana; De Falco, Sandro; Ambati, Jayakrishna | Signal transduction and targeted therapy. | 2016; | 26925256 | |
| Alzheimer's Disease Risk Polymorphisms Regulate Gene Expression in the ZCWPW1 and the CELF1 Loci. | Karch, Celeste M; Ezerskiy, Lubov A; Bertelsen, Sarah; Alzheimer?s Disease Genetics Consortium (ADGC); Goate, Alison M | PloS one. | 2016; | 26919393 | |
| Human IgG1 antibodies suppress angiogenesis in a target-independent manner. | Bogdanovich, Sasha; Kim, Younghee; Mizutani, Takeshi; Yasuma, Reo; Tudisco, Laura; Cicatiello, Valeria; Bastos-Carvalho, Ana; Kerur, Nagaraj; Hirano, Yoshio; Baffi, Judit Z; Tarallo, Valeria; Li, Shengjian; Yasuma, Tetsuhiro; Arpitha, Parthasarathy; Fowler, Benjamin J; Wright, Charles B; Apicella, Ivana; Greco, Adelaide; Brunetti, Arturo; Ruvo, Menotti; Sandomenico, Annamaria; Nozaki, Miho; Ijima, Ryo; Kaneko, Hiroki; Ogura, Yuichiro; Terasaki, Hiroko; Ambati, Balamurali K; Leusen, Jeanette Hw; Langdon, Wallace Y; Clark, Michael R; Armour, Kathryn L; Bruhns, Pierre; Verbeek, J Sjef; Gelfand, Bradley D; De Falco, Sandro; Ambati, Jayakrishna | Signal transduction and targeted therapy. | 2016; | 26918197 | |
| Association of Left Atrial Local Conduction Velocity With Late Gadolinium Enhancement on Cardiac Magnetic Resonance in Patients With Atrial Fibrillation. | Fukumoto, Kotaro; Habibi, Mohammadali; Ipek, Esra Gucuk; Zahid, Sohail; Khurram, Irfan M; Zimmerman, Stefan L; Zipunnikov, Vadim; Spragg, David; Ashikaga, Hiroshi; Trayanova, Natalia; Tomaselli, Gordon F; Rickard, John; Marine, Joseph E; Berger, Ronald D; | Circulation. Arrhythmia and electrophysiology. | 2016 Mar; | 26917814 | |
| Hypoxia as a therapy for mitochondrial disease. | Jain, Isha H; Zazzeron, Luca; Goli, Rahul; Alexa, Kristen; Schatzman-Bone, Stephanie; Dhillon, Harveen; Goldberger, Olga; Peng, Jun; Shalem, Ophir; Sanjana, Neville E; Zhang, Feng; Goessling, Wolfram; Zapol, Warren M; Mootha, Vamsi K | Science (New York, N.Y.). | 2016 Apr 1; | 26917594 | |
| Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes. | Solomon, Kevin V; Haitjema, Charles H; Henske, John K; Gilmore, Sean P; Borges-Rivera, Diego; Lipzen, Anna; Brewer, Heather M; Purvine, Samuel O; Wright, Aaron T; Theodorou, Michael K; Grigoriev, Igor V; Regev, Aviv; Thompson, Dawn A; O'Malley, Michelle A | Science (New York, N.Y.). | 2016 Mar 11; | 26912365 | |
| Embedding a Panoramic Representation of Infrared Light in the Adult Rat Somatosensory Cortex through a Sensory Neuroprosthesis. | Hartmann, Konstantin; Thomson, Eric E; Zea, Ivan; Yun, Richy; Mullen, Peter; Canarick, Jay; Huh, Albert; Nicolelis, Miguel A L | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Feb 24; | 26911689 | |
| Temporal modulation of collective cell behavior controls vascular network topology. | Kur, Esther; Kim, Jiha; Tata, Aleksandra; Comin, Cesar H; Harrington, Kyle I; Costa, Luciano da F; Bentley, Katie; Gu, Chenghua | eLife. | 2016 Feb 24; | 26910011 | |
| moco: Fast Motion Correction for Calcium Imaging. | Dubbs, Alexander; Guevara, James; Yuste, Rafael | Frontiers in neuroinformatics. | 2016; | 26909035 | |
| Quantitative Multiscale Cell Imaging in Controlled 3D Microenvironments. | Welf, Erik S; Driscoll, Meghan K; Dean, Kevin M; Schäfer, Claudia; Chu, Jun; Davidson, Michael W; Lin, Michael Z; Danuser, Gaudenz; Fiolka, Reto | Developmental cell. | 2016 Feb 22; | 462-75 | 26906741 |
| Contrasting responses within a single neuron class enable sex-specific attraction in Caenorhabditis elegans. | Narayan, Anusha; Venkatachalam, Vivek; Durak, Omer; Reilly, Douglas K; Bose, Neelanjan; Schroeder, Frank C; Samuel, Aravinthan D T; Srinivasan, Jagan; Sternberg, Paul W | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Mar 08; | 26903633 | |
| Shooting for the Moon: Nanoscale Approaches to Cancer. | Hammond, Paula T | ACS nano. | 2016 Feb 23; | 26902596 | |
| Probing the Complexities of Astrocyte Calcium Signaling. | Shigetomi, Eiji; Patel, Sandip; Khakh, Baljit S | Trends in cell biology. | 2016 Feb 16; | 26896246 | |
| Intermittent drivers anchoring to structural heterogeneities as a major pathophysiological mechanism of human persistent atrial fibrillation. | Haissaguerre, Michel; Shah, Ashok J; Cochet, Hubert; Hocini, Meleze; Dubois, Remi; Efimov, Igor; Vigmond, Edward; Bernus, Olivier; Trayanova, Natalia | The Journal of physiology. | 2016 May 1; | 26890861 | |
| Membrane Potential Dynamics of CA1 Pyramidal Neurons during Hippocampal Ripples in Awake Mice. | Hulse, Brad K; Moreaux, Laurent C; Lubenov, Evgueniy V; Siapas, Athanassios G | Neuron. | 2016 Feb 17; | 800-13 | 26889811 |
| Evaluating Public Health Interventions: 2. Stepping Up to Routine Public Health Evaluation With the Stepped Wedge Design. | Spiegelman, Donna | American journal of public health. | 2016 Mar; | 26885961 | |
| Photoacoustic microscopy of arteriovenous shunts and blood diffusion in early-stage tumors. | Yeh, Chenghung; Liang, Jinyang; Zhou, Yong; Hu, Song; Sohn, Rebecca E; Arbeit, Jeffrey M; Wang, Lihong V | Journal of biomedical optics. | 2016 Feb; | 26882446 | |
| Discovery of 2-Indole-acylsulfonamide Myeloid Cell Leukemia 1 (Mcl-1) Inhibitors Using Fragment-Based Methods. | Pelz, Nicholas F; Bian, Zhiguo; Zhao, Bin; Shaw, Subrata; Tarr, James C; Belmar, Johannes; Gregg, Claire; Camper, DeMarco V; Goodwin, Craig M; Arnold, Allison L; Sensintaffar, John L; Friberg, Anders; Rossanese, Olivia W; Lee, Taekyu; Olejniczak, Edward T; Fesik, Stephen W | Journal of medicinal chemistry. | 2016 Mar 10; | 26878343 | |
| Structure and Engineering of Francisella novicida Cas9. | Hirano, Hisato; Gootenberg, Jonathan S; Horii, Takuro; Abudayyeh, Omar O; Kimura, Mika; Hsu, Patrick D; Nakane, Takanori; Ishitani, Ryuichiro; Hatada, Izuho; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu | Cell. | 2016 Feb 25; | 26875867 | |
| Regenerative Medicine: Potential Mechanisms of Cardiac Recovery in Takotsubo Cardiomyopathy. | Chang, Andrew Y; Kittle, Jessie T; Wu, Sean M | Current treatment options in cardiovascular medicine. | 2016 Mar; | 26874708 | |
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| Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes. | Phanse, Sadhna; Wan, Cuihong; Borgeson, Blake; Tu, Fan; Drew, Kevin; Clark, Greg; Xiong, Xuejian; Kagan, Olga; Kwan, Julian; Bezginov, Alexandr; Chessman, Kyle; Pal, Swati; Cromar, Graham; Papoulas, Ophelia; Ni, Zuyao; Boutz, Daniel R; Stoilova, Snejana; | Data in brief. | 2016 Mar; | 26870755 | |
| Multimodal stimulus coding by a gustatory sensory neuron in Drosophila larvae. | van Giesen, Lena; Hernandez-Nunez, Luis; Delasoie-Baranek, Sophie; Colombo, Martino; Renaud, Philippe; Bruggmann, Rémy; Benton, Richard; Samuel, Aravinthan D T; Sprecher, Simon G | Nature communications. | 2016 Feb 11; | 26864722 | |
| Design of a mobile, homogeneous, and efficient electromagnet with a large field of view for neonatal low-field MRI. | Lother, Steffen; Schiff, Steven J; Neuberger, Thomas; Jakob, Peter M; Fidler, Florian | Magma (New York, N.Y.). | 2016 Aug; | 26861046 | |
| Cytosolic NADH-NAD+ redox visualized in brain slices by two-photon fluorescence lifetime biosensor imaging. | Mongeon, Rebecca; Venkatachalam, Veena; Yellen, Gary | Antioxidants & redox signaling. | 2016 Feb 9; | 26857245 | |
| Saccharomyces cerevisiae as a tool for mining, studying and engineering fungal polyketide synthases. | Bond, Carly; Tang, Yi; Li, Li | Fungal genetics and biology : FG & B. | 2016 Feb 2; | 26850128 | |
| Clostridium difficile associated risk of death score (CARDS): a novel severity score to predict mortality among hospitalised patients with C. difficile infection. | Kassam, Z; Cribb Fabersunne, C; Smith, M B; Alm, E J; Kaplan, G G; Nguyen, G C; Ananthakrishnan, A N | Alimentary pharmacology & therapeutics. | 2016 Mar; | 26849527 | |
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| On the Structure of Neuronal Population Activity under Fluctuations in Attentional State. | Ecker, Alexander S; Denfield, George H; Bethge, Matthias; Tolias, Andreas S | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Feb 3; | 26843656 | |
| Structurally Defined ?MHC-II Nanobody-Drug Conjugates: A Therapeutic and Imaging System for B-Cell Lymphoma. | Fang, Tao; Duarte, Joao N; Ling, Jingjing; Li, Zeyang; Guzman, Jonathan S; Ploegh, Hidde L | Angewandte Chemie (International ed. in English). | 2016 Feb 12; | 26840214 | |
| Animal models of osteoarthritis: classification, update, and measurement of outcomes. | Kuyinu, Emmanuel L; Narayanan, Ganesh; Nair, Lakshmi S; Laurencin, Cato T | Journal of orthopaedic surgery and research. | 2016; | 26837951 | |
| Precisely parameterized experimental and computational models of tissue organization. | Molitoris, Jared M; Paliwal, Saurabh; Sekar, Rajesh B; Blake, Robert; Park, JinSeok; Trayanova, Natalia A; Tung, Leslie; Levchenko, Andre | Integrative biology : quantitative biosciences from nano to macro. | 2016 Feb; | 26822672 | |
| Engineering nanolayered particles for modular drug delivery. | Correa, Santiago; Dreaden, Erik C; Gu, Li; Hammond, Paula T | Journal of controlled release : official journal of the Controlled Release Society. | 2016 Oct 28; | 26809005 | |
| Tudor-SN Interacts with Piwi Antagonistically in Regulating Spermatogenesis but Synergistically in Silencing Transposons in Drosophila. | Ku, Hsueh-Yen; Gangaraju, Vamsi K; Qi, Hongying; Liu, Na; Lin, Haifan | PLoS genetics. | 2016 Jan; | 26808625 | |
| Genes with monoallelic expression contribute disproportionately to genetic diversity in humans. | Savova, Virginia; Chun, Sung; Sohail, Mashaal; McCole, Ruth B; Witwicki, Robert; Gai, Lisa; Lenz, Tobias L; Wu, C-ting; Sunyaev, Shamil R; Gimelbrant, Alexander A | Nature genetics. | 2016 Mar; | 26808112 | |
| Neural Circuits Underlying Visually Evoked Escapes in Larval Zebrafish. | Dunn, Timothy W; Gebhardt, Christoph; Naumann, Eva A; Riegler, Clemens; Ahrens, Misha B; Engert, Florian; Del Bene, Filippo | Neuron. | 2016 Feb 3; | 613-28 | 26804997 |
| Production of New Cladosporin Analogues by Reconstitution of the Polyketide Synthases Responsible for the Biosynthesis of this Antimalarial Agent. | Cochrane, Rachel V K; Sanichar, Randy; Lambkin, Gareth R; Reiz, Béla; Xu, Wei; Tang, Yi; Vederas, John C | Angewandte Chemie (International ed. in English). | 2016 Jan 11; | 26783060 | |
| Piwi maintains germline stem cells and oogenesis in Drosophila through negative regulation of Polycomb group proteins. | Peng, Jamy C; Valouev, Anton; Liu, Na; Lin, Haifan | Nature genetics. | 2016 Mar; | 26780607 | |
| Whole-brain activity mapping onto a zebrafish brain atlas. | Randlett, Owen; Wee, Caroline L; Naumann, Eva A; Nnaemeka, Onyeka; Schoppik, David; Fitzgerald, James E; Portugues, Ruben; Lacoste, Alix M B; Riegler, Clemens; Engert, Florian; Schier, Alexander F | Nature methods. | 2015 Nov; | 1039-46 | 26778924 |
| Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data. | Pnevmatikakis, Eftychios A; Soudry, Daniel; Gao, Yuanjun; Machado, Timothy A; Merel, Josh; Pfau, David; Reardon, Thomas; Mu, Yu; Lacefield, Clay; Yang, Weijian; Ahrens, Misha; Bruno, Randy; Jessell, Thomas M; Peterka, Darcy S; Yuste, Rafael; Paninski, Liam | Neuron. | 2016 Jan 20; | 26774160 | |
| Simultaneous Multi-plane Imaging of Neural Circuits. | Yang, Weijian; Miller, Jae-Eun Kang; Carrillo-Reid, Luis; Pnevmatikakis, Eftychios; Paninski, Liam; Yuste, Rafael; Peterka, Darcy S | Neuron. | 2016 Jan 20; | 269-84 | 26774159 |
| Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin. | Snyder, Matthew W; Kircher, Martin; Hill, Andrew J; Daza, Riza M; Shendure, Jay | Cell. | 2016 Jan 14; | 57-68 | 26771485 |
| Super-resolution imaging reveals distinct chromatin folding for different epigenetic states. | Boettiger, Alistair N; Bintu, Bogdan; Moffitt, Jeffrey R; Wang, Siyuan; Beliveau, Brian J; Fudenberg, Geoffrey; Imakaev, Maxim; Mirny, Leonid A; Wu, Chao-ting; Zhuang, Xiaowei | Nature. | 2016 Jan 21; | 26760202 | |
| Computational discovery of pathway-level genetic vulnerabilities in non-small-cell lung cancer. | Young, Jonathan H; Peyton, Michael; Seok Kim, Hyun; McMillan, Elizabeth; Minna, John D; White, Michael A; Marcotte, Edward M | Bioinformatics (Oxford, England). | 2016 May 1; | 26755624 | |
| Identification and Optimization of Anthranilic Acid Based Inhibitors of Replication Protein?A. | Patrone, James D; Pelz, Nicholas F; Bates, Brittney S; Souza-Fagundes, Elaine M; Vangamudi, Bhavatarini; Camper, Demarco V; Kuznetsov, Alexey G; Browning, Carrie F; Feldkamp, Michael D; Frank, Andreas O; Gilston, Benjamin A; Olejniczak, Edward T; Rossanese, Olivia W; Waterson, Alex G; Chazin, Walter J; Fesik, Stephen W | ChemMedChem. | 2016 Jan 8; | 26748787 | |
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| High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects. | Kleinstiver, Benjamin P; Pattanayak, Vikram; Prew, Michelle S; Tsai, Shengdar Q; Nguyen, Nhu T; Zheng, Zongli; Joung, J Keith | Nature. | 2016 Jan 28; | 26735016 | |
| Myocardial Infarct Segmentation From Magnetic Resonance Images for Personalized Modeling of Cardiac Electrophysiology. | Ukwatta, Eranga; Arevalo, Hermenegild; Li, Kristina; Yuan, Jing; Qiu, Wu; Malamas, Peter; Wu, Katherine C; Trayanova, Natalia A; Vadakkumpadan, Fijoy | IEEE transactions on medical imaging. | 2016 Jun; | 26731693 | |
| A dual fluorescent reporter for the investigation of methionine mistranslation in live cells. | Gomes, Ana Cristina; Kordala, Anna J; Strack, Rita; Wang, Xiaoyun; Geslain, Renaud; Delaney, Kamila; Clark, Wesley C; Keenan, Robert; Pan, Tao | RNA (New York, N.Y.). | 2016 Mar; | 26729921 | |
| Poly(glycoamidoamine) Brushes Formulated Nanomaterials for Systemic siRNA and mRNA Delivery in Vivo. | Dong, Yizhou; Dorkin, J Robert; Wang, Weiheng; Chang, Philip H; Webber, Matthew J; Tang, Benjamin C; Yang, Junghoon; Abutbul-Ionita, Inbal; Danino, Dganit; DeRosa, Frank; Heartlein, Michael; Langer, Robert; Anderson, Daniel G | Nano letters. | 2016 Feb 10; | 26727632 | |
| Rate-dependent force, intracellular calcium, and action potential voltage alternans are modulated by sarcomere length and heart failure induced-remodeling of thin filament regulation in human heart failure: A myocyte modeling study. | Zile, Melanie A; Trayanova, Natalia A | Progress in biophysics and molecular biology. | 2015 Dec 25; | 26724571 | |
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| Genetic and Epigenetic Variation, but Not Diet, Shape the Sperm Methylome. | Shea, Jeremy M; Serra, Ryan W; Carone, Benjamin R; Shulha, Hennady P; Kucukural, Alper; Ziller, Michael J; Vallaster, Markus P; Gu, Hongcang; Tapper, Andrew R; Gardner, Paul D; Meissner, Alexander; Garber, Manuel; Rando, Oliver J | Developmental cell. | 2015 Dec 21; | 26702833 | |
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| Mice with Shank3 Mutations Associated with ASD and Schizophrenia Display Both Shared and Distinct Defects. | Zhou, Yang; Kaiser, Tobias; Monteiro, Patrícia; Zhang, Xiangyu; Van der Goes, Marie S; Wang, Dongqing; Barak, Boaz; Zeng, Menglong; Li, Chenchen; Lu, Congyi; Wells, Michael; Amaya, Aldo; Nguyen, Shannon; Lewis, Michael; Sanjana, Neville; Zhou, Yongdi; Zha | Neuron. | 2016 Jan 6; | 26687841 | |
| Cell-Specific Transcriptional Profiling of Ciliated Sensory Neurons Reveals Regulators of Behavior and Extracellular Vesicle Biogenesis. | Wang, Juan; Kaletsky, Rachel; Silva, Malan; Williams, April; Haas, Leonard A; Androwski, Rebecca J; Landis, Jessica N; Patrick, Cory; Rashid, Alina; Santiago-Martinez, Dianaliz; Gravato-Nobre, Maria; Hodgkin, Jonathan; Hall, David H; Murphy, Coleen T; Barr, Maureen M | Current biology : CB. | 2015 Dec 21; | 26687621 | |
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| Image-based Reconstruction of 3D Myocardial Infarct Geometry for Patient Specific Applications. | Ukwatta, Eranga; Rajchl, Martin; White, James; Pashakhanloo, Farhad; Herzka, Daniel A; McVeigh, Elliot; Lardo, Albert C; Trayanova, Natalia; Vadakkumpadan, Fijoy | Proceedings of SPIE--the International Society for Optical Engineering. | 2015 Feb 21; | 26633913 | |
| Enzyme-Mediated Modification of Single-Domain Antibodies for Imaging Modalities with Different Characteristics. | Rashidian, Mohammad; Wang, Lu; Edens, Jerre G; Jacobsen, Johanne T; Hossain, Intekhab; Wang, Qifan; Victora, Gabriel D; Vasdev, Neil; Ploegh, Hidde; Liang, Steven H | Angewandte Chemie (International ed. in English). | 2016 Jan 11; | 26630549 | |
| Understanding Programming of Fungal Iterative Polyketide Synthases: The Biochemical Basis for Regioselectivity by the Methyltransferase Domain in the Lovastatin Megasynthase. | Cacho, Ralph A; Thuss, Justin; Xu, Wei; Sanichar, Randy; Gao, Zhizeng; Nguyen, Allison; Vederas, John C; Tang, Yi | Journal of the American Chemical Society. | 2015 Dec 23; | 26630357 | |
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| How computer simulations of the human heart can improve anti-arrhythmia therapy. | Trayanova, Natalia A; Chang, Kelly C | The Journal of physiology. | 2016 May 1; | 26621489 | |
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| Controlling AAV Tropism in the Nervous System with Natural and Engineered Capsids. | Castle, Michael J; Turunen, Heikki T; Vandenberghe, Luk H; Wolfe, John H | Methods in molecular biology (Clifton, N.J.). | 2016; | 133-49 | 26611584 |
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| High-speed recording of neural spikes in awake mice and flies with a fluorescent voltage sensor. | Gong, Yiyang; Huang, Cheng; Li, Jin Zhong; Grewe, Benjamin F; Zhang, Yanping; Eismann, Stephan; Schnitzer, Mark J | Science (New York, N.Y.). | 2015 Dec 11; | 26586188 | |
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| Bactericidal Antibiotics Induce Toxic Metabolic Perturbations that Lead to Cellular Damage. | Belenky, Peter; Ye, Jonathan D; Porter, Caroline B M; Cohen, Nadia R; Lobritz, Michael A; Ferrante, Thomas; Jain, Saloni; Korry, Benjamin J; Schwarz, Eric G; Walker, Graham C; Collins, James J | Cell reports. | 2015 Nov 3; | 968-80 | 26565910 |
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| Variation in Taxonomic Composition of the Fecal Microbiota in an Inbred Mouse Strain across Individuals and Time. | Hoy, Yana Emmy; Bik, Elisabeth M; Lawley, Trevor D; Holmes, Susan P; Monack, Denise M; Theriot, Julie A; Relman, David A | PloS one. | 2015; | e0142825 | 26565698 |
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| Composite Sequence-Structure Stability Models as Screening Tools for Identifying Vulnerable Targets for HIV Drug and Vaccine Development. | Manocheewa, Siriphan; Mittler, John E; Samudrala, Ram; Mullins, James I | Viruses. | 2015 Nov 04; | 26556362 | |
| Multiscale photoacoustic tomography using reversibly switchable bacterial phytochrome as a near-infrared photochromic probe. | Yao, Junjie; Kaberniuk, Andrii A; Li, Lei; Shcherbakova, Daria M; Zhang, Ruiying; Wang, Lidai; Li, Guo; Verkhusha, Vladislav V; Wang, Lihong V | Nature methods. | 2016 Jan; | 67-73 | 26550774 |
| Convergence and Stability of a Class of Iteratively Re-weighted Least Squares Algorithms for Sparse Signal Recovery in the Presence of Noise. | Babadi, Behtash; Ba, Demba; Purdon, Patrick L; Brown, Emery N | IEEE transactions on signal processing : a publication of the IEEE Signal Processing Society. | 2013 Oct 30; | 183-195 | 26549965 |
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| Organization of the Mammalian Ionome According to Organ Origin, Lineage Specialization, and Longevity. | Ma, Siming; Lee, Sang-Goo; Kim, Eun Bae; Park, Thomas J; Seluanov, Andrei; Gorbunova, Vera; Buffenstein, Rochelle; Seravalli, Javier; Gladyshev, Vadim N | Cell reports. | 2015 Nov 17; | 1319-26 | 26549444 |
| Lift NIH restrictions on chimera research. | Sharma, Arun; Sebastiano, Vittorio; Scott, Christopher T; Magnus, David; Koyano-Nakagawa, Naoko; Garry, Daniel J; Witte, Owen N; Nakauchi, Hiromitsu; Wu, Joseph C; Weissman, Irving L; Wu, Sean M | Science (New York, N.Y.). | 2015 Nov 6; | 26542560 | |
| MouseNet v2: a database of gene networks for studying the laboratory mouse and eight other model vertebrates. | Kim, Eiru; Hwang, Sohyun; Kim, Hyojin; Shim, Hongseok; Kang, Byunghee; Yang, Sunmo; Shim, Jae Ho; Shin, Seung Yeon; Marcotte, Edward M; Lee, Insuk | Nucleic acids research. | 2016 Jan 4; | 26527726 | |
| Bessel-beam Grueneisen relaxation photoacoustic microscopy with extended depth of field. | Shi, Junhui; Wang, Lidai; Noordam, Cedric; Wang, Lihong V | Journal of biomedical optics. | 2015 Nov; | 116002 | 26524679 |
| Broadening the targeting range of Staphylococcus aureus CRISPR-Cas9 by modifying PAM recognition. | Kleinstiver, Benjamin P; Prew, Michelle S; Tsai, Shengdar Q; Nguyen, Nhu T; Topkar, Ved V; Zheng, Zongli; Joung, J Keith | Nature biotechnology. | 2015 Dec; | 1293-1298 | 26524662 |
| Fixed single-cell transcriptomic characterization of human radial glial diversity. | Thomsen, Elliot R; Mich, John K; Yao, Zizhen; Hodge, Rebecca D; Doyle, Adele M; Jang, Sumin; Shehata, Soraya I; Nelson, Angelique M; Shapovalova, Nadiya V; Levi, Boaz P; Ramanathan, Sharad | Nature methods. | 2016 Jan; | 87-93 | 26524239 |
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| Dual-Modality Photoacoustic and Ultrasound Imaging System for Noninvasive Sentinel Lymph Node Detection in Patients with Breast Cancer. | Garcia-Uribe, Alejandro; Erpelding, Todd N; Krumholz, Arie; Ke, Haixin; Maslov, Konstantin; Appleton, Catherine; Margenthaler, Julie A; Wang, Lihong V | Scientific reports. | 2015; | 15748 | 26510774 |
| Intrinsic Antimicrobial Resistance Determinants in the Superbug Pseudomonas aeruginosa. | Murray, Justine L; Kwon, Taejoon; Marcotte, Edward M; Whiteley, Marvin | mBio. | 2015; | 26507235 | |
| Encrypted Three-dimensional Dynamic Imaging using Snapshot Time-of-flight Compressed Ultrafast Photography. | Liang, Jinyang; Gao, Liang; Hai, Pengfei; Li, Chiye; Wang, Lihong V | Scientific reports. | 2015; | 15504 | 26503834 |
| Can Sibling Sex Ratios Be Used as a Valid Test for the Prenatal Androgen Hypothesis of Autism Spectrum Disorders? | Cheslack-Postava, Keely; Susser, Ezra; Liu, Kayuet; Bearman, Peter S | PloS one. | 2015; | e0141338 | 26495967 |
| Comparison of 10,11-Dehydrocurvularin Polyketide Synthases from Alternaria cinerariae and Aspergillus terreus Highlights Key Structural Motifs. | Cochrane, Rachel V K; Gao, Zhizeng; Lambkin, Gareth R; Xu, Wei; Winter, Jaclyn M; Marcus, Sandra L; Tang, Yi; Vederas, John C | Chembiochem : a European journal of chemical biology. | 2015 Nov; | 26493380 | |
| Efficient delivery of nuclease proteins for genome editing in human stem cells and primary cells. | Liu, Jia; Gaj, Thomas; Yang, Yifeng; Wang, Nan; Shui, Sailan; Kim, Sojung; Kanchiswamy, Chidananda Nagamangala; Kim, Jin-Soo; Barbas 3rd, Carlos F | Nature protocols. | 2015 Nov; | 1842-59 | 26492140 |
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| Poreless eggshells. | Lin, Haifan; Matzuk, Martin M | The Journal of clinical investigation. | 2015 Nov 2; | 4005-7 | 26485282 |
| A National Network of Neurotechnology Centers for the BRAIN Initiative. | Alivisatos, A Paul; Chun, Miyoung; Church, George M; Greenspan, Ralph J; Roukes, Michael L; Yuste, Rafael | Neuron. | 2015 Nov 4; | 26481036 | |
| Graphene Oxide Nanosheets Modified with Single-Domain Antibodies for Rapid and Efficient Capture of Cells. | Chen, Guan-Yu; Li, Zeyang; Theile, Christopher S; Bardhan, Neelkanth M; Kumar, Priyank V; Duarte, Joao N; Maruyama, Takeshi; Rashidfarrokh, Ali; Belcher, Angela M; Ploegh, Hidde L | Chemistry (Weinheim an der Bergstrasse, Germany). | 2015 Nov 23; | 26472062 | |
| Seeing Through the Surface: Non-invasive Characterization of Biomaterial-Tissue Interactions Using Photoacoustic Microscopy. | Zhang, Yu Shrike; Wang, Lihong V; Xia, Younan | Annals of biomedical engineering. | 2015 Oct 15; | 26471785 | |
| Discovery of Unclustered Fungal Indole Diterpene Biosynthetic Pathways through Combinatorial Pathway Reassembly in Engineered Yeast. | Tang, Man-Cheng; Lin, Hsiao-Ching; Li, Dehai; Zou, Yi; Li, Jian; Xu, Wei; Cacho, Ralph A; Hillenmeyer, Maureen E; Garg, Neil K; Tang, Yi | Journal of the American Chemical Society. | 2015 Nov 4; | 13724-7 | 26469304 |
| On the problem of boundaries and scaling for urban street networks. | Masucci, A Paolo; Arcaute, Elsa; Hatna, Erez; Stanilov, Kiril; Batty, Michael | Journal of the Royal Society, Interface / the Royal Society. | 2015 Oct 6; | 20150763 | 26468071 |
| Common variants in DRD2 are associated with sleep duration: the CARe consortium. | Cade, Brian E; Gottlieb, Daniel J; Lauderdale, Diane S; Bennett, David A; Buchman, Aron S; Buxbaum, Sarah G; De Jager, Philip L; Evans, Daniel S; Fülöp, Tibor; Gharib, Sina A; Johnson, W Craig; Kim, Hyun; Larkin, Emma K; Lee, Seung Ku; Lim, Andrew S; Punjabi, Naresh M; Shin, Chol; Stone, Katie L; Tranah, Gregory J; Weng, Jia; Yaffe, Kristine; Zee, Phyllis C; Patel, Sanjay R; Zhu, Xiaofeng; Redline, Susan; Saxena, Richa | Human molecular genetics. | 2016 Jan 1; | 167-79 | 26464489 |
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| Working memory capacity is associated with optimal adaptation of response bias to perceptual sensitivity in emotion perception. | Lynn, Spencer K; Ibagon, Camila; Bui, Eric; Palitz, Sophie A; Simon, Naomi M; Barrett, Lisa Feldman | Emotion (Washington, D.C.). | 2016 Mar; | 26461251 | |
| Microbiota-Dependent Sequelae of Acute Infection Compromise Tissue-Specific Immunity. | Fonseca, Denise Morais da; Hand, Timothy W; Han, Seong-Ji; Gerner, Michael Y; Glatman Zaretsky, Arielle; Byrd, Allyson L; Harrison, Oliver J; Ortiz, Alexandra M; Quinones, Mariam; Trinchieri, Giorgio; Brenchley, Jason M; Brodsky, Igor E; Germain, Ronald N | Cell. | 2015 Oct 8; | 26451485 | |
| Maternal Ube3a Loss Disrupts Sleep Homeostasis But Leaves Circadian Rhythmicity Largely Intact. | Ehlen, J Christopher; Jones, Kelly A; Pinckney, Lennisha; Gray, Cloe L; Burette, Susan; Weinberg, Richard J; Evans, Jennifer A; Brager, Allison J; Zylka, Mark J; Paul, Ketema N; Philpot, Benjamin D; DeBruyne, Jason P | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2015 Oct 07; | 26446213 | |
| The molecular constituents of the blood-brain barrier. | Chow, Brian Wai; Gu, Chenghua | Trends in neurosciences. | 2015 Oct; | 598-608 | 26442694 |
| A New MRI-Based Model of Heart Function with Coupled Hemodynamics and Application to Normal and Diseased Canine Left Ventricles. | Choi, Young Joon; Constantino, Jason; Vedula, Vijay; Trayanova, Natalia; Mittal, Rajat | Frontiers in bioengineering and biotechnology. | 2015; | 26442254 | |
| Lipid Profiles and Signals for Long Life. | Schroeder, Elizabeth A; Brunet, Anne | Trends in endocrinology and metabolism: TEM. | 2015 Nov; | 589-92 | 26439976 |
| Drosophila melanogaster Natural Variation Affects Growth Dynamics of Infecting Listeria monocytogenes. | Hotson, Alejandra Guzmán; Schneider, David S | G3 (Bethesda, Md.). | 2015 Dec; | 26438294 | |
| Orthogonal gene knockout and activation with a catalytically active Cas9 nuclease. | Dahlman, James E; Abudayyeh, Omar O; Joung, Julia; Gootenberg, Jonathan S; Zhang, Feng; Konermann, Silvana | Nature biotechnology. | 2015 Nov; | 1159-61 | 26436575 |
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| Genome Editing in Human Cells Using CRISPR/Cas Nucleases. | Wyvekens, Nicolas; Tsai, Shengdar Q; Joung, J Keith | Current protocols in molecular biology. | 2015 Oct 01; | 26423589 | |
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| Cardioprotective Actions of TGF?RI Inhibition Through Stimulating Autocrine/Paracrine of Survivin and Inhibiting Wnt in Cardiac Progenitors. | Ho, Yu-Sian; Tsai, Wan-Hsuan; Lin, Fen-Chiung; Huang, Wei-Pang; Lin, Lung-Chun; Wu, Sean M; Liu, Yu-Ru; Chen, Wen-Pin | Stem cells (Dayton, Ohio). | 2015 Sep 29; | 26418219 | |
| Continuous Antigenic Stimulation of DO11.10 TCR Transgenic Mice in the Presence or Absence of IL-1?: Possible Implications for Mechanisms of T Cell Depletion in HIV Disease. | Ladell, Kristin; Hazenberg, Mette D; Fitch, Mark; Emson, Claire; McEvoy-Hein Asgarian, Bridget K; Mold, Jeff E; Miller, Corey; Busch, Robert; Price, David A; Hellerstein, Marc K; McCune, Joseph M | Journal of immunology (Baltimore, Md. : 1950). | 2015 Nov 1; | 4096-105 | 26416271 |
| Studying a Drug-like, RNA-Focused Small Molecule Library Identifies Compounds That Inhibit RNA Toxicity in Myotonic Dystrophy. | Rzuczek, Suzanne G; Southern, Mark R; Disney, Matthew D | ACS chemical biology. | 2015 Dec 18; | 26414664 | |
| In Vivo Evaluation of Adipose-Derived Stromal Cells Delivered with a Nanofiber Scaffold for Tendon-to-Bone Repair. | Lipner, Justin; Shen, Hua; Cavinatto, Leonardo; Liu, Wenying; Havlioglu, Necat; Xia, Younan; Galatz, Leesa M; Thomopoulos, Stavros | Tissue engineering. Part A. | 2015 Nov; | 2766-74 | 26414599 |
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| AFFECT AND THE FRAMING EFFECT WITHIN INDIVIDUALS OVER TIME: RISK TAKING IN A DYNAMIC INVESTMENT SIMULATION. | Seo, Myeong-Gu; Goldfarb, Brent; Barrett, Lisa Feldman | Academy of Management journal. Academy of Management. | 2010 Apr; | 26412860 | |
| AgRP Neurons Regulate Bone Mass. | Kim, Jae Geun; Sun, Ben-Hua; Dietrich, Marcelo O; Koch, Marco; Yao, Gang-Qing; Diano, Sabrina; Insogna, Karl; Horvath, Tamas L | Cell reports. | 2015 Oct 6; | 14-Aug | 26411686 |
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| Waking State: Rapid Variations Modulate Neural and Behavioral Responses. | McGinley, Matthew J; Vinck, Martin; Reimer, Jacob; Batista-Brito, Renata; Zagha, Edward; Cadwell, Cathryn R; Tolias, Andreas S; Cardin, Jessica A; McCormick, David A | Neuron. | 2015 Sep 23; | 1143-61 | 26402600 |
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| Heightened sensitivity to emotional expressions in generalised anxiety disorder, compared to social anxiety disorder, and controls. | Bui, Eric; Anderson, Eric; Goetter, Elizabeth M; Campbell, Allison A; Fischer, Laura E; Barrett, Lisa Feldman; Simon, Naomi M | Cognition & emotion. | 2017 Jan; | 26395075 | |
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| 16p11.2 Deletion Syndrome Mice Display Sensory and Ultrasonic Vocalization Deficits During Social Interactions. | Yang, Mu; Mahrt, Elena J; Lewis, Freeman; Foley, Gillian; Portmann, Thomas; Dolmetsch, Ricardo E; Portfors, Christine V; Crawley, Jacqueline N | Autism research : official journal of the International Society for Autism Research. | 2015 Feb 7; | 25663600 | |
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| Using SV119-Gold Nanocage Conjugates to Eradicate Cancer Stem Cells Through a Combination of Photothermal and Chemo Therapies. | Sun, Tianmeng; Wang, Yi; Wang, Yucai; Xu, Jinbin; Zhao, Xin; Vangveravong, Suwanna; Mach, Robert H; Xia, Younan | Advanced healthcare materials | 2014 Mar 26 | NULL | 24677807 |
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| Discovery of a potent stapled helix peptide that binds to the 70N domain of replication protein A. | Frank, Andreas O; Vangamudi, Bhavatarini; Feldkamp, Michael D; Souza-Fagundes, Elaine M; Luzwick, Jessica W; Cortez, David; Olejniczak, Edward T; Waterson, Alex G; Rossanese, Olivia W; Chazin, Walter J; Fesik, Stephen W | Journal of medicinal chemistry | 2014 Mar 27 | 2455-61 | 24491171 |
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| Sodium current reduction unmasks a structure-dependent substrate for arrhythmogenesis in the normal ventricles. | Boyle, Patrick M; Park, Carolyn J; Arevalo, Hermenegild J; Vigmond, Edward J; Trayanova, Natalia A | PloS one. | 2014; | e86947 | 24489810 |
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| Bacteriophages use an expanded genetic code on evolutionary paths to higher fitness. | Hammerling, Michael J; Ellefson, Jared W; Boutz, Daniel R; Marcotte, Edward M; Ellington, Andrew D; Barrick, Jeffrey E | Nature chemical biology | 2014 Mar | 178-80 | 24487692 |
| Multicontrast photoacoustic in vivo imaging using near-infrared fluorescent proteins. | Krumholz, Arie; Shcherbakova, Daria M; Xia, Jun; Wang, Lihong V; Verkhusha, Vladislav V | Scientific reports | 2014 | 3939 | 24487319 |
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| Lis1 regulates asymmetric division in hematopoietic stem cells and in leukemia. | Zimdahl, Bryan; Ito, Takahiro; Blevins, Allen; Bajaj, Jeevisha; Konuma, Takaaki; Weeks, Joi; Koechlein, Claire S; Kwon, Hyog Young; Arami, Omead; Rizzieri, David; Broome, H Elizabeth; Chuah, Charles; Oehler, Vivian G; Sasik, Roman; Hardiman, Gary; Reya, T | Nature genetics | 2014 Mar | 245-52 | 24487275 |
| Cortical activity in the null space: permitting preparation without movement. | Kaufman, Matthew T; Churchland, Mark M; Ryu, Stephen I; Shenoy, Krishna V | Nature neuroscience | 2014 Mar | 440-8 | 24487233 |
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| Spin models inferred from patient-derived viral sequence data faithfully describe HIV fitness landscapes. | Shekhar, Karthik; Ruberman, Claire F; Ferguson, Andrew L; Barton, John P; Kardar, Mehran; Chakraborty, Arup K | Physical review. E, Statistical, nonlinear, and soft matter physics. | 2013 Dec; | 62705 | 24483484 |
| Long term stability of nanowire nanoelectronics in physiological environments. | Zhou, Wei; Dai, Xiaochuan; Fu, Tian-Ming; Xie, Chong; Liu, Jia; Lieber, Charles M | Nano letters | 2014 Mar 12 | 1614-9 | 24479700 |
| Nonlinear light-sheet fluorescence microscopy by photobleaching imprinting. | Gao, Liang; Zhu, Liren; Li, Chiye; Wang, Lihong V | Journal of the Royal Society, Interface / the Royal Society | 2014 Apr 6 | 20130851 | 24478278 |
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| Emerging applications of phase-change materials (PCMs): teaching an old dog new tricks. | Hyun, Dong Choon; Levinson, Nathanael S; Jeong, Unyong; Xia, Younan | Angewandte Chemie (International ed. in English) | 2014 Apr 7 | 3780-95 | 24470287 |
| Ferromagnetic nanoparticles with peroxidase-like activity enhance the cleavage of biological macromolecules for biofilm elimination. | Gao, Lizeng; Giglio, Krista M; Nelson, Jacquelyn L; Sondermann, Holger; Travis, Alexander J | Nanoscale | 2014 Mar 7 | 2588-93 | 24468900 |
| fMRI of retina-originated phosphenes experienced by patients with leber congenital amaurosis. | Ashtari, Manzar; Cyckowski, Laura; Yazdi, Alborz; Viands, Amanda; Marshall, Kathleen; Bokkon, Istvan; Maguire, Albert; Bennett, Jean | PloS one | 2014 | e86068 | 24465873 |
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| Neonatal insulin action impairs hypothalamic neurocircuit formation in response to maternal high-fat feeding. | Vogt, Merly C; Paeger, Lars; Hess, Simon; Steculorum, Sophie M; Awazawa, Motoharu; Hampel, Brigitte; Neupert, Susanne; Nicholls, Hayley T; Mauer, Jan; Hausen, A Christine; Predel, Reinhard; Kloppenburg, Peter; Horvath, Tamas L; Bruning, Jens C | Cell | 2014 Jan 30 | 495-509 | 24462248 |
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| Expanding the zinc-finger recombinase repertoire: directed evolution and mutational analysis of serine recombinase specificity determinants. | Sirk, Shannon J; Gaj, Thomas; Jonsson, Andreas; Mercer, Andrew C; Barbas 3rd, Carlos F | Nucleic acids research | 2014 Apr 1 | 4755-66 | 24452803 |
| Chronic Spinal Cord Electrical Stimulation Protects Against 6-hydroxydopamine Lesions. | Yadav, Amol P; Fuentes, Romulo; Zhang, Hao; Vinholo, Thais; Wang, Chi-Han; Freire, Marco Aurelio M; Nicolelis, Miguel A L | Scientific reports | 2014 | 3839 | 24452435 |
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| Diversity of human tRNA genes from the 1000-genomes project. | Parisien, Marc; Wang, Xiaoyun; Pan, Tao | RNA biology | 2013 Dec 1 | 1853-67 | 24448271 |
| Neurite outgrowth on electrospun nanofibers with uniaxial alignment: the effects of fiber density, surface coating, and supporting substrate. | Xie, Jingwei; Liu, Wenying; MacEwan, Matthew R; Bridgman, Paul C; Xia, Younan | ACS nano | 2014 Feb 25 | 1878-85 | 24444076 |
| Fabrication of Cell Patches Using Biodegradable Scaffolds with a Hexagonal Array of Interconnected Pores (SHAIPs). | Zhang, Yu Shrike; Yao, Junjie; Wang, Lihong V; Xia, Younan | Polymer | 2014 Jan 14 | 445-452 | 24443593 |
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| Grafting aptamers onto gold nanostars increases in vitro efficacy in a wide range of cancer cell types. | Dam, Duncan Hieu M; Culver, Kayla S B; Odom, Teri W | Molecular pharmaceutics | 2014 Feb 3 | 580-7 | 24422969 |
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| Electrical Stimulation of the Ventral Tegmental Area Induces Reanimation from General Anesthesia. | Solt, Ken; Van Dort, Christa J; Chemali, Jessica J; Taylor, Norman E; Kenny, Jonathan D; Brown, Emery N | Anesthesiology | 2014 Jan 6 | NULL | 24398816 |
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| Higher CD27+CD8+ T cells percentages during suppressive antiretroviral therapy predict greater subsequent CD4+ T cell recovery in treated HIV infection. | Seu, Lillian; Ortiz, Gabriel M; Epling, Lorrie; Sinclair, Elizabeth; Swainson, Louise A; Bajpai, Urmila D; Huang, Yong; Deeks, Steven G; Hunt, Peter W; Martin, Jeffrey N; McCune, Joseph M | PloS one | 2013 | e84091 | 24391889 |
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| Flies and humans share a motion estimation strategy that exploits natural scene statistics. | Clark, Damon A; Fitzgerald, James E; Ales, Justin M; Gohl, Daryl M; Silies, Marion A; Norcia, Anthony M; Clandinin, Thomas R | Nature neuroscience | 2014 Feb | 296-303 | 24390225 |
| Is there consistency and specificity of autonomic changes during emotional episodes? Guidance from the Conceptual Act Theory and psychophysiology. | Quigley, Karen S; Barrett, Lisa Feldman | Biological psychology | 2014 Jan 2 | NULL | 24388802 |
| Germline progenitors escape the widespread phenomenon of homolog pairing during Drosophila development. | Joyce, Eric F; Apostolopoulos, Nicholas; Beliveau, Brian J; Wu, C-ting | PLoS genetics | 2013 | e1004013 | 24385920 |
| Comprehensive proteomic profiling of outer membrane vesicles from Campylobacter jejuni. | Jang, Kyoung-Soon; Sweredoski, Michael J; Graham, Robert L J; Hess, Sonja; Clemons Jr, William M | Journal of proteomics | 2014 Feb 26 | 90-8 | 24382552 |
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| High-resolution photoacoustic tomography of resting-state functional connectivity in the mouse brain. | Nasiriavanaki, Mohammadreza; Xia, Jun; Wan, Hanlin; Bauer, Adam Quentin; Culver, Joseph P; Wang, Lihong V | Proceedings of the National Academy of Sciences of the United States of America. | 2014 Jan 07; | 24367107 | |
| Incorporation of flexible objectives and time-linked simulation with flux balance analysis. | Birch, Elsa W; Udell, Madeleine; Covert, Markus W | Journal of theoretical biology | 2014 Mar 21 | 21-Dec | 24361328 |
| Kinesin-1 regulates synaptic strength by mediating the delivery, removal, and redistribution of AMPA receptors. | Hoerndli, Frédéric J; Maxfield, Dane A; Brockie, Penelope J; Mellem, Jerry E; Jensen, Erica; Wang, Rui; Madsen, David M; Maricq, Andres V | Neuron. | 2013 Dec 18; | 24360545 | |
| Interactome maps of mouse gene regulatory domains reveal basic principles of transcriptional regulation. | Kieffer-Kwon, Kyong-Rim; Tang, Zhonghui; Mathe, Ewy; Qian, Jason; Sung, Myong-Hee; Li, Guoliang; Resch, Wolfgang; Baek, Songjoon; Pruett, Nathanael; Grontved, Lars; Vian, Laura; Nelson, Steevenson; Zare, Hossein; Hakim, Ofir; Reyon, Deepak; Yamane, Arito; | Cell | 2013 Dec 19 | 1507-20 | 24360274 |
| Spiking Neural Network Decoder for Brain-Machine Interfaces. | Dethier, Julie; Gilja, Vikash; Nuyujukian, Paul; Elassaad, Shauki A; Shenoy, Krishna V; Boahen, Kwabena | International IEEE/EMBS Conference on Neural Engineering : [proceedings]. International IEEE EMBS Conference on Neural Engineering | 2011 | NULL | 24352611 |
| National and local influenza surveillance through Twitter: an analysis of the 2012-2013 influenza epidemic. | Broniatowski, David A; Paul, Michael J; Dredze, Mark | PloS one | 2013 | e83672 | 24349542 |
| Caveolin-3 regulates compartmentation of cardiomyocyte beta2-adrenergic receptor-mediated cAMP signaling. | Wright, Peter T; Nikolaev, Viacheslav O; O'Hara, Thomas; Diakonov, Ivan; Bhargava, Anamika; Tokar, Sergiy; Schobesberger, Sophie; Shevchuk, Andrew I; Sikkel, Markus B; Wilkinson, Ross; Trayanova, Natalia A; Lyon, Alexander R; Harding, Sian E; Gorelik, Julia | Journal of molecular and cellular cardiology. | 2014 Feb; | 38-48 | 24345421 |
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| Trends in antibiotic resistance in coagulase-negative staphylococci in the United States, 1999 to 2012. | May, Larissa; Klein, Eili Y; Rothman, Richard E; Laxminarayan, Ramanan | Antimicrobial agents and chemotherapy | 2014 Mar | 1404-9 | 24342646 |
| Genome-scale CRISPR-Cas9 knockout screening in human cells. | Shalem, Ophir; Sanjana, Neville E; Hartenian, Ella; Shi, Xi; Scott, David A; Mikkelsen, Tarjei S; Heckl, Dirk; Ebert, Benjamin L; Root, David E; Doench, John G; Zhang, Feng | Science (New York, N.Y.) | 2014 Jan 3 | 84-7 | 24336571 |
| Free-standing kinked nanowire transistor probes for targeted intracellular recording in three dimensions. | Qing, Quan; Jiang, Zhe; Xu, Lin; Gao, Ruixuan; Mai, Liqiang; Lieber, Charles M | Nature nanotechnology | 2013 Dec 15 | NULL | 24336402 |
| Mycobacteria manipulate macrophage recruitment through coordinated use of membrane lipids. | Cambier, C J; Takaki, Kevin K; Larson, Ryan P; Hernandez, Rafael E; Tobin, David M; Urdahl, Kevin B; Cosma, Christine L; Ramakrishnan, Lalita | Nature | 2014 Jan 9 | 218-22 | 24336213 |
| Using well-defined Ag nanocubes as substrates to quantify the spatial resolution and penetration depth of surface-enhanced Raman scattering imaging. | Moran, Christine H; Rycenga, Matthew; Xia, Xiaohu; Cobley, Claire M; Xia, Younan | Nanotechnology | 2014 Jan 10 | 14007 | 24334508 |
| Nasal Microenvironments and Interspecific Interactions Influence Nasal Microbiota Complexity and S.ýýaureus Carriage. | Yan, Miling; Pamp, Sunje J; Fukuyama, Julia; Hwang, Peter H; Cho, Do-Yeon; Holmes, Susan; Relman, David A | Cell host & microbe | 2013 Dec 11 | 631-40 | 24331461 |
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| Absolute photoacoustic thermometry in deep tissue. | Yao, Junjie; Ke, Haixin; Tai, Stephen; Zhou, Yong; Wang, Lihong V | Optics letters | 2013 Dec 15 | 5228-31 | 24322224 |
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| Structural basis for enhanced HIV-1 neutralization by a dimeric immunoglobulin G form of the glycan-recognizing antibody 2G12. | Wu, Yunji; West Jr, Anthony P; Kim, Helen J; Thornton, Matthew E; Ward, Andrew B; Bjorkman, Pamela J | Cell reports | 2013 Dec 12 | 1443-55 | 24316082 |
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| Males shorten the life span of C. elegans hermaphrodites via secreted compounds. | Maures, Travis J; Booth, Lauren N; Benayoun, Berenice A; Izrayelit, Yevgeniy; Schroeder, Frank C; Brunet, Anne | Science (New York, N.Y.) | 2014 Jan 31 | 541-4 | 24292626 |
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| Simulating the evolution of the human family: cooperative breeding increases in harsh environments. | Smaldino, Paul E; Newson, Lesley; Schank, Jeffrey C; Richerson, Peter J | PloS one | 2013 | e80753 | 24278318 |
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| High-resolution mapping reveals a conserved, widespread, dynamic mRNA methylation program in yeast meiosis. | Schwartz, Schraga; Agarwala, Sudeep D; Mumbach, Maxwell R; Jovanovic, Marko; Mertins, Philipp; Shishkin, Alexander; Tabach, Yuval; Mikkelsen, Tarjei S; Satija, Rahul; Ruvkun, Gary; Carr, Steven A; Lander, Eric S; Fink, Gerald R; Regev, Aviv | Cell | 2013 Dec 5 | 1409-21 | 24269006 |
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| Regulation of Endogenous Human Gene Expression by Ligand-Inducible TALE Transcription Factors. | Mercer, Andrew C; Gaj, Thomas; Sirk, Shannon J; Lamb, Brian M; Barbas 3rd, Carlos F | ACS synthetic biology | 2013 Nov 22 | NULL | 24251925 |
| CD4 CTL: Living up to the challenge. | Cheroutre, Hilde; Husain, Mohammad Mushtaq | Seminars in immunology | 2013 Nov 15 | 273-81 | 24246226 |
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| Complexity generation in fungal polyketide biosynthesis: a spirocycle-forming P450 in the concise pathway to the antifungal drug griseofulvin. | Cacho, Ralph A; Chooi, Yit-Heng; Zhou, Hui; Tang, Yi | ACS chemical biology | 2013 Oct 18 | 2322-30 | 23978092 |
| Optical-resolution photoacoustic microscopy: auscultation of biological systems at the cellular level. | Hu, Song; Wang, Lihong V | Biophysical journal | 2013 Aug 20 | 841-7 | 23972836 |
| Circadian gene Bmal1 regulates diurnal oscillations of Ly6C(hi) inflammatory monocytes. | Nguyen, Khoa D; Fentress, Sarah J; Qiu, Yifu; Yun, Karen; Cox, Jeffery S; Chawla, Ajay | Science (New York, N.Y.) | 2013 Sep 27 | 1483-8 | 23970558 |
| Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein. | Feldkamp, Michael D; Frank, Andreas O; Kennedy, J Phillip; Patrone, James D; Vangamudi, Bhavatarini; Waterson, Alex G; Fesik, Stephen W; Chazin, Walter J | Biochemistry | 2013 Sep 17 | 6515-24 | 23962067 |
| Microscale polymer bottles corked with a phase-change material for temperature-controlled release. | Hyun, Dong Choon; Lu, Ping; Choi, Sang-Il; Jeong, Unyong; Xia, Younan | Angewandte Chemie (International ed. in English) | 2013 Sep 27 | 10468-71 | 23959631 |
| Neuroscience thinks big (and collaboratively). | Kandel, Eric R; Markram, Henry; Matthews, Paul M; Yuste, Rafael; Koch, Christof | Nature reviews. Neuroscience. | 2013 Sep; | 659-64 | 23958663 |
| Salmonella require the fatty acid regulator PPARýý for the establishment of a metabolic environment essential for long-term persistence. | Eisele, Nicholas A; Ruby, Thomas; Jacobson, Amanda; Manzanillo, Paolo S; Cox, Jeffery S; Lam, Lilian; Mukundan, Lata; Chawla, Ajay; Monack, Denise M | Cell host & microbe | 2013 Aug 14 | 171-82 | 23954156 |
| Nanoelectronics Meets Biology: From New Nanoscale Devices for Live-Cell Recording to 3D Innervated Tissues. | Duan, Xiaojie; Lieber, Charles M | Chemistry, an Asian journal | 2013 Oct | 2304-14 | 23946279 |
| In silico abstraction of zinc finger nuclease cleavage profiles reveals an expanded landscape of off-target sites. | Sander, Jeffry D; Ramirez, Cherie L; Linder, Samantha J; Pattanayak, Vikram; Shoresh, Noam; Ku, Manching; Foden, Jennifer A; Reyon, Deepak; Bernstein, Bradley E; Liu, David R; Joung, J Keith | Nucleic acids research | 2013 Oct | e181 | 23945932 |
| Phospholipase B is activated in response to sterol removal and stimulates acrosome exocytosis in murine sperm. | Asano, Atsushi; Nelson-Harrington, Jacquelyn L; Travis, Alexander J | The Journal of biological chemistry | 2013 Sep 27 | 28104-15 | 23943622 |
| Optical clearing-aided photoacoustic microscopy with enhanced resolution and imaging depth. | Zhou, Yong; Yao, Junjie; Wang, Lihong V | Optics letters | 2013 Jul 15 | 2592-5 | 23939121 |
| Stochastic cytokine expression induces mixed T helper cell States. | Fang, Miaoqing; Xie, Huangming; Dougan, Stephanie K; Ploegh, Hidde; van Oudenaarden, Alexander | PLoS biology | 2013 Jul | e1001618 | 23935453 |
| Allele-specific detection of single mRNA molecules in situ. | Hansen, Clinton H; van Oudenaarden, Alexander | Nature methods | 2013 Aug 11 | NULL | 23934076 |
| Efficient preloading of the ventricles by a properly timed atrial contraction underlies stroke work improvement in the acute response to cardiac resynchronization therapy. | Hu, Yuxuan; Gurev, Viatcheslav; Constantino, Jason; Trayanova, Natalia | Heart rhythm : the official journal of the Heart Rhythm Society. | 2013 Dec; | 1800-6 | 23928177 |
| RNA Replicon Delivery via Lipid-Complexed PRINT Protein Particles. | Xu, Jing; Luft, J Christopher; Yi, Xianwen; Tian, Shaomin; Owens, Gary; Wang, Jin; Johnson, Ashley; Berglund, Peter; Smith, Jonathan; Napier, Mary E; Desimone, Joseph M | Molecular pharmaceutics | 2013 Aug 21 | NULL | 23924216 |
| Conceptualizing and experiencing compassion. | Condon, Paul; Feldman Barrett, Lisa | Emotion (Washington, D.C.) | 2013 Oct | 817-21 | 23914766 |
| Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A. | Patrone, James D; Kennedy, J Phillip; Frank, Andreas O; Feldkamp, Michael D; Vangamudi, Bhavatarini; Pelz, Nicholas F; Rossanese, Olivia W; Waterson, Alex G; Chazin, Walter J; Fesik, Stephen W | ACS medicinal chemistry letters | 2013 Jul 11 | 601-605 | 23914285 |
| Spinal projection neurons control turning behaviors in zebrafish. | Huang, Kuo-Hua; Ahrens, Misha B; Dunn, Timothy W; Engert, Florian | Current biology : CB | 2013 Aug 19 | 1566-73 | 23910662 |
| Epilepsy biomarkers. | Engel Jr, Jerome; Pitkanen, Asla; Loeb, Jeffrey A; Dudek, F Edward; Bertram 3rd, Edward H; Cole, Andrew J; Moshe, Solomon L; Wiebe, Samuel; Jensen, Frances E; Mody, Istvan; Nehlig, Astrid; Vezzani, Annamaria | Epilepsia | 2013 Aug | 61-9 | 23909854 |
| Issues related to symptomatic and disease-modifying treatments affecting cognitive and neuropsychiatric comorbidities of epilepsy. | Brooks-Kayal, Amy R; Bath, Kevin G; Berg, Anne T; Galanopoulou, Aristea S; Holmes, Gregory L; Jensen, Frances E; Kanner, Andres M; O'Brien, Terence J; Whittemore, Vicky H; Winawer, Melodie R; Patel, Manisha; Scharfman, Helen E | Epilepsia | 2013 Aug | 44-60 | 23909853 |
| Issues related to development of antiepileptogenic therapies. | Pitkanen, Asla; Nehlig, Astrid; Brooks-Kayal, Amy R; Dudek, F Edward; Friedman, Daniel; Galanopoulou, Aristea S; Jensen, Frances E; Kaminski, Rafal M; Kapur, Jaideep; Klitgaard, Henrik; Loscher, Wolfgang; Mody, Istvan; Schmidt, Dieter | Epilepsia | 2013 Aug | 35-43 | 23909852 |
| Expression of Isl1 during mouse development. | Zhuang, Shaowei; Zhang, Qingquan; Zhuang, Tao; Evans, Sylvia M; Liang, Xingqun; Sun, Yunfu | Gene expression patterns : GEP | 2013 Jul 29 | 407-412 | 23906961 |
| Microbiota's 'little helpers': bacteriophages and antibiotic-associated responses in the gut microbiome. | Sun, Christine L; Relman, David A | Genome biology. | 2013; | 127 | 23906048 |
| Nanometre-scale thermometry in a living cell. | Kucsko, G; Maurer, P C; Yao, N Y; Kubo, M; Noh, H J; Lo, P K; Park, H; Lukin, M D | Nature | 2013 Aug 1 | 54-8 | 23903748 |
| Calibration-free quantification of absolute oxygen saturation based on the dynamics of photoacoustic signals. | Xia, Jun; Danielli, Amos; Liu, Yan; Wang, Lidai; Maslov, Konstantin; Wang, Lihong V | Optics letters | 2013 Aug 1 | 2800-3 | 23903146 |
| Random-access optical-resolution photoacoustic microscopy using a digital micromirror device. | Liang, Jinyang; Zhou, Yong; Winkler, Amy W; Wang, Lidai; Maslov, Konstantin I; Li, Chiye; Wang, Lihong V | Optics letters | 2013 Aug 1 | 2683-6 | 23903111 |
| Rapidly-dissolvable microneedle patches via a highly scalable and reproducible soft lithography approach. | Moga, Katherine A; Bickford, Lissett R; Geil, Robert D; Dunn, Stuart S; Pandya, Ashish A; Wang, Yapei; Fain, John H; Archuleta, Christine F; O'Neill, Adrian T; Desimone, Joseph M | Advanced materials (Deerfield Beach, Fla.) | 2013 Sep 25 | 5060-6 | 23893866 |
| CRISPR RNA-guided activation of endogenous human genes. | Maeder, Morgan L; Linder, Samantha J; Cascio, Vincent M; Fu, Yanfang; Ho, Quan H; Joung, J Keith | Nature methods | 2013 Oct | 977-9 | 23892898 |
| Real-time segmentation of burst suppression patterns in critical care EEG monitoring. | Brandon Westover, M; Shafi, Mouhsin M; Ching, Shinung; Chemali, Jessica J; Purdon, Patrick L; Cash, Sydney S; Brown, Emery N | Journal of neuroscience methods | 2013 Sep 30 | 131-41 | 23891828 |
| Local cortical dynamics of burst suppression in the anaesthetized brain. | Lewis, Laura D; Ching, Shinung; Weiner, Veronica S; Peterfreund, Robert A; Eskandar, Emad N; Cash, Sydney S; Brown, Emery N; Purdon, Patrick L | Brain : a journal of neurology | 2013 Sep | 2727-37 | 23887187 |
| Deep-tissue photoacoustic tomography of Forster resonance energy transfer. | Wang, Yu; Xia, Jun; Wang, Lihong V | Journal of biomedical optics | 2013 | 101316 | 23884608 |
| Optical control of mammalian endogenous transcription and epigenetic states. | Konermann, Silvana; Brigham, Mark D; Trevino, Alexandro E; Hsu, Patrick D; Heidenreich, Matthias; Cong, Le; Platt, Randall J; Scott, David A; Church, George M; Zhang, Feng | Nature | 2013 Aug 22 | 472-6 | 23877069 |
| Heritable and precise zebrafish genome editing using a CRISPR-Cas system. | Hwang, Woong Y; Fu, Yanfang; Reyon, Deepak; Maeder, Morgan L; Kaini, Prakriti; Sander, Jeffry D; Joung, J Keith; Peterson, Randall T; Yeh, Jing-Ruey Joanna | PloS one | 2013 | e68708 | 23874735 |
| An enzyme that inactivates the inflammatory mediator leukotriene b4 restricts mycobacterial infection. | Tobin, David M; Roca, Francisco J; Ray, John P; Ko, Dennis C; Ramakrishnan, Lalita | PloS one | 2013 | e67828 | 23874453 |
| DNA targeting specificity of RNA-guided Cas9 nucleases. | Hsu, Patrick D; Scott, David A; Weinstein, Joshua A; Ran, F Ann; Konermann, Silvana; Agarwala, Vineeta; Li, Yinqing; Fine, Eli J; Wu, Xuebing; Shalem, Ophir; Cradick, Thomas J; Marraffini, Luciano A; Bao, Gang; Zhang, Feng | Nature biotechnology | 2013 Sep | 827-32 | 23873081 |
| Coordination of heart and lung co-development by a multipotent cardiopulmonary progenitor. | Peng, Tien; Tian, Ying; Boogerd, Cornelis J; Lu, Min Min; Kadzik, Rachel S; Stewart, Kathleen M; Evans, Sylvia M; Morrisey, Edward E | Nature | 2013 Aug 29 | 589-92 | 23873040 |
| Structure prediction of partial-length protein sequences. | Laurenzi, Adrian; Hung, Ling-Hong; Samudrala, Ram | International journal of molecular sciences | 2013 | 14892-907 | 23867606 |
| Heparan sulfate proteoglycans containing a glypican 5 core and 2-O-sulfo-iduronic acid function as Sonic Hedgehog co-receptors to promote proliferation. | Witt, Rochelle M; Hecht, Marie-Lyn; Pazyra-Murphy, Maria F; Cohen, Samuel M; Noti, Christian; van Kuppevelt, Toin H; Fuller, Maria; Chan, Jennifer A; Hopwood, John J; Seeberger, Peter H; Segal, Rosalind A | The Journal of biological chemistry | 2013 Sep 6 | 26275-88 | 23867465 |
| A coaxial optrode as multifunction write-read probe for optogenetic studies in non-human primates. | Ozden, Ilker; Wang, Jing; Lu, Yao; May, Travis; Lee, Joonhee; Goo, Werapong; O'Shea, Daniel J; Kalanithi, Paul; Diester, Ilka; Diagne, Mohamed; Deisseroth, Karl; Shenoy, Krishna V; Nurmikko, Arto V | Journal of neuroscience methods | 2013 Sep 30 | 142-54 | 23867081 |
| RNA interference knockdown of DNA methyl-transferase 3 affects gene alternative splicing in the honey bee. | Li-Byarlay, Hongmei; Li, Yang; Stroud, Hume; Feng, Suhua; Newman, Thomas C; Kaneda, Megan; Hou, Kirk K; Worley, Kim C; Elsik, Christine G; Wickline, Samuel A; Jacobsen, Steven E; Ma, Jian; Robinson, Gene E | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jul 30 | 12750-5 | 23852726 |
| A neurodegeneration-specific gene-expression signature of acutely isolated microglia from an amyotrophic lateral sclerosis mouse model. | Chiu, Isaac M; Morimoto, Emiko T A; Goodarzi, Hani; Liao, Jennifer T; O'Keeffe, Sean; Phatnani, Hemali P; Muratet, Michael; Carroll, Michael C; Levy, Shawn; Tavazoie, Saeed; Myers, Richard M; Maniatis, Tom | Cell reports | 2013 Jul 25 | 385-401 | 23850290 |
| Modular use of peripheral input channels tunes motion-detecting circuitry. | Silies, Marion; Gohl, Daryl M; Fisher, Yvette E; Freifeld, Limor; Clark, Damon A; Clandinin, Thomas R | Neuron | 2013 Jul 10 | 111-27 | 23849199 |
| TB: the Yin and Yang of lipid mediators. | Tobin, David M; Ramakrishnan, Lalita | Current opinion in pharmacology | 2013 Aug | 641-5 | 23849093 |
| Dysbiosis of the gut microbiota is associated with hiv disease progression and tryptophan catabolism. | Vujkovic-Cvijin, Ivan; Dunham, Richard M; Iwai, Shoko; Maher, Michael C; Albright, Rebecca G; Broadhurst, Mara J; Hernandez, Ryan D; Lederman, Michael M; Huang, Yong; Somsouk, Ma; Deeks, Steven G; Hunt, Peter W; Lynch, Susan V; McCune, Joseph M | Science translational medicine | 2013 Jul 10 | 193ra91 | 23843452 |
| Instantaneous three-dimensional sensing using spatial light modulator illumination with extended depth of field imaging. | Quirin, Sean; Peterka, Darcy S; Yuste, Rafael | Optics express. | 2013 Jul 1; | 16007-21 | 23842387 |
| Correction: Evolutionary principles of modular gene regulation in yeasts. | Thompson, Dawn A; Roy, Sushmita; Chan, Michelle; Styczynski, Mark P; Pfiffner, Jenna; French, Courtney; Socha, Amanda; Thielke, Anne; Napolitano, Sara; Muller, Paul; Kellis, Manolis; Konieczka, Jay H; Wapinski, Ilan; Regev, Aviv | eLife. | 2013; | e01114 | 23840936 |
| Expanding the structural diversity of polyketides by exploring the cofactor tolerance of an inline methyltransferase domain. | Winter, Jaclyn M; Chiou, Grace; Bothwell, Ian R; Xu, Wei; Garg, Neil K; Luo, Minkui; Tang, Yi | Organic letters | 2013 Jul 19 | 3774-7 | 23837609 |
| SNP ascertainment bias in population genetic analyses: why it is important, and how to correct it. | Lachance, Joseph; Tishkoff, Sarah A | BioEssays : news and reviews in molecular, cellular and developmental biology | 2013 Sep | 780-6 | 23836388 |
| The developmental transcriptome of the mosquito Aedes aegypti, an invasive species and major arbovirus vector. | Akbari, Omar S; Antoshechkin, Igor; Amrhein, Henry; Williams, Brian; Diloreto, Race; Sandler, Jeremy; Hay, Bruce A | G3 (Bethesda, Md.) | 2013 Sep | 1493-509 | 23833213 |
| R-loops and nicks initiate DNA breakage and genome instability in non-growing Escherichia coli. | Wimberly, Hallie; Shee, Chandan; Thornton, P C; Sivaramakrishnan, Priya; Rosenberg, Susan M; Hastings, P J | Nature communications | 2013 Jul 5 | 2115 | 23828459 |
| Intracellular temperature mapping with fluorescence-assisted photoacoustic-thermometry. | Gao, Liang; Zhang, Chi; Li, Chiye; Wang, Lihong V | Applied physics letters. | 2013 May 13; | 193705 | 23825801 |
| Thalamocortical mechanisms for the anteriorization of alpha rhythms during propofol-induced unconsciousness. | Vijayan, Sujith; Ching, Shinung; Purdon, Patrick L; Brown, Emery N; Kopell, Nancy J | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2013 Jul 3 | 11070-5 | 23825412 |
| Great ape genetic diversity and population history. | Prado-Martinez, Javier; Sudmant, Peter H; Kidd, Jeffrey M; Li, Heng; Kelley, Joanna L; Lorente-Galdos, Belen; Veeramah, Krishna R; Woerner, August E; O'Connor, Timothy D; Santpere, Gabriel; Cagan, Alexander; Theunert, Christoph; Casals, Ferran; Laayouni, | Nature | 2013 Jul 3 | NULL | 23823723 |
| Engineering customized TALE nucleases (TALENs) and TALE transcription factors by fast ligation-based automatable solid-phase high-throughput (FLASH) assembly. | Reyon, Deepak; Maeder, Morgan L; Khayter, Cyd; Tsai, Shengdar Q; Foley, Jonathan E; Sander, Jeffry D; Joung, J Keith | Current protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.] | 2013 Jul | Unit 12.16 | 23821439 |
| The aging brain and anesthesia. | Brown, Emery N; Purdon, Patrick L | Current opinion in anaesthesiology | 2013 Aug | 414-9 | 23820102 |
| The NADPH metabolic network regulates human ýýB-crystallin cardiomyopathy and reductive stress in Drosophila melanogaster. | Xie, Heng B; Cammarato, Anthony; Rajasekaran, Namakkal S; Zhang, Huali; Suggs, Jennifer A; Lin, Ho-Chen; Bernstein, Sanford I; Benjamin, Ivor J; Golic, Kent G | PLoS genetics | 2013 Jun | e1003544 | 23818860 |
| The Role of Aromatic-Aromatic Interactions in Strand-Strand Stabilization of ýý-Sheets. | Budyak, Ivan L; Zhuravleva, Anastasia; Gierasch, Lila M | Journal of molecular biology | 2013 Sep 23 | 3522-35 | 23810905 |
| Homeostatic regulation of dendritic dynamics in a motor map in vivo. | Kishore, Sandeep; Fetcho, Joseph R | Nature communications | 2013 Jun 27 | 2086 | 23803587 |
| The microRNA regulation of stem cells. | Huang, Xiao Albert; Lin, Haifan | Wiley interdisciplinary reviews. Developmental biology | 2012 Jan-Feb | 83-95 | 23801669 |
| Modeling Spatial Correlation of DNA Deformation: DNA Allostery in Protein Binding. | Xu, Xinliang; Ge, Hao; Gu, Chan; Gao, Yi Qin; Wang, Siyuan S; Thio, Beng Joo Reginald; Hynes, James T; Xie, X Sunney; Cao, Jianshu | The journal of physical chemistry. B | 2013 Jul 8 | NULL | 23795567 |
| High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells. | Fu, Yanfang; Foden, Jennifer A; Khayter, Cyd; Maeder, Morgan L; Reyon, Deepak; Joung, J Keith; Sander, Jeffry D | Nature biotechnology | 2013 Jun 23 | NULL | 23792628 |
| GABAergic lateral interactions tune the early stages of visual processing in Drosophila. | Freifeld, Limor; Clark, Damon A; Schnitzer, Mark J; Horowitz, Mark A; Clandinin, Thomas R | Neuron | 2013 Jun 19 | 1075-89 | 23791198 |
| A bacterial export system for generating extracellular amyloid aggregates. | Sivanathan, Viknesh; Hochschild, Ann | Nature protocols | 2013 Jul | 1381-90 | 23787895 |
| Generating Better Medicines for Cancer. | Dunn, Stuart S; Byrne, James D; Perry, Jillian L; Chen, Kai; Desimone, Joseph M | ACS macro letters | 2013 Apr 24 | 393-397 | 23772351 |
| Visual predictions in the orbitofrontal cortex rely on associative content. | Chaumon, Maximilien; Kveraga, Kestutis; Barrett, Lisa Feldman; Bar, Moshe | Cerebral cortex (New York, N.Y. : 1991). | 2014 Nov; | 2899-907 | 23771980 |
| Real-time Closed-loop Control in a Rodent Model of Medically Induced Coma Using Burst Suppression. | Ching, Shinung; Liberman, Max Y; Chemali, Jessica J; Westover, M Brandon; Kenny, Jonathan; Solt, Ken; Purdon, Patrick L; Brown, Emery N | Anesthesiology | 2013 Jun 13 | NULL | 23770601 |
| Choroid-plexus-derived Otx2 homeoprotein constrains adult cortical plasticity. | Spatazza, Julien; Lee, Henry H C; Di Nardo, Ariel A; Tibaldi, Lorenzo; Joliot, Alain; Hensch, Takao K; Prochiantz, Alain | Cell reports | 2013 Jun 27 | 1815-23 | 23770240 |
| Specific kinematics and motor-related neurons for aversive chemotaxis in Drosophila. | Gao, Xiaojing J; Potter, Christopher J; Gohl, Daryl M; Silies, Marion; Katsov, Alexander Y; Clandinin, Thomas R; Luo, Liqun | Current biology : CB | 2013 Jul 8 | 1163-72 | 23770185 |
| Microbial persistence and the road to drug resistance. | Cohen, Nadia R; Lobritz, Michael A; Collins, James J | Cell host & microbe | 2013 Jun 12 | 632-42 | 23768488 |
| Photoacoustic Microscopy in Tissue Engineering. | Cai, Xin; Zhang, Yu Shrike; Xia, Younan; Wang, Lihong V | Materials today (Kidlington, England) | 2013 Mar 1 | 67-77 | 23766667 |
| Two-photon calcium imaging during fictive navigation in virtual environments. | Ahrens, Misha B; Huang, Kuo Hua; Narayan, Sujatha; Mensh, Brett D; Engert, Florian | Frontiers in neural circuits. | 2013; | 23761738 | |
| Discovery of Cryptic Polyketide Metabolites from Dermatophytes Using Heterologous Expression in Aspergillus nidulans. | Yin, Wen-Bing; Chooi, Yit Heng; Smith, Adam R; Cacho, Ralph A; Hu, Youcai; White, Theodore C; Tang, Yi | ACS synthetic biology | 2013 Jun 11 | 23758576 | |
| Computational analysis of anti-HIV-1 antibody neutralization panel data to identify potential functional epitope residues. | West Jr, Anthony P; Scharf, Louise; Horwitz, Joshua; Klein, Florian; Nussenzweig, Michel C; Bjorkman, Pamela J | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jun 10 | 23754383 | |
| The cortical angiome: an interconnected vascular network with noncolumnar patterns of blood flow. | Blinder, Pablo; Tsai, Philbert S; Kaufhold, John P; Knutsen, Per M; Suhl, Harry; Kleinfeld, David | Nature neuroscience | 2013 Jul | 889-97 | 23749145 |
| Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome. | Modi, Sheetal R; Lee, Henry H; Spina, Catherine S; Collins, James J | Nature | 2013 Jun 9 | NULL | 23748443 |
| A closed-loop anesthetic delivery system for real-time control of burst suppression. | Liberman, Max Y; Ching, Shinung; Chemali, Jessica; Brown, Emery N | Journal of neural engineering | 2013 Aug | 46004 | 23744607 |
| HCN4 dynamically marks the first heart field and conduction system precursors. | Liang, Xingqun; Wang, Gang; Lin, Lizhu; Lowe, Jennifer; Zhang, Qingquan; Bu, Lei; Chen, Yihan; Chen, Ju; Sun, Yunfu; Evans, Sylvia M | Circulation research | 2013 Aug 2 | 399-407 | 23743334 |
| Cortical control of arm movements: a dynamical systems perspective. | Shenoy, Krishna V; Sahani, Maneesh; Churchland, Mark M | Annual review of neuroscience | 2013 Jul 8 | 337-59 | 23725001 |
| piggyBac transposase tools for genome engineering. | Li, Xianghong; Burnight, Erin R; Cooney, Ashley L; Malani, Nirav; Brady, Troy; Sander, Jeffry D; Staber, Janice; Wheelan, Sarah J; Joung, J Keith; McCray Jr, Paul B; Bushman, Frederic D; Sinn, Patrick L; Craig, Nancy L | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jun 18 | E2279-87 | 23723351 |
| Mapping and cracking sensorimotor circuits in genetic model organisms. | Clark, Damon A; Freifeld, Limor; Clandinin, Thomas R | Neuron | 2013 May 22 | 583-95 | 23719159 |
| Eosinophils secrete IL-4 to facilitate liver regeneration. | Goh, Y P Sharon; Henderson, Neil C; Heredia, Jose E; Red Eagle, Alex; Odegaard, Justin I; Lehwald, Nadja; Nguyen, Khoa D; Sheppard, Dean; Mukundan, Lata; Locksley, Richard M; Chawla, Ajay | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jun 11 | 9914-9 | 23716700 |
| A Reactive Oxygen Species (ROS)-Responsive Polymer for Safe, Efficient, and Targeted Gene Delivery in Cancer Cells. | Shim, Min Suk; Xia, Younan | Angewandte Chemie (International ed. in English) | 2013 Jul 1 | 6926-9 | 23716349 |
| Untangling the web: the diverse functions of the PIWI/piRNA pathway. | Mani, Sneha Ramesh; Juliano, Celina E | Molecular reproduction and development | 2013 Aug | 632-64 | 23712694 |
| The roles of monkey M1 neuron classes in movement preparation and execution. | Kaufman, Matthew T; Churchland, Mark M; Shenoy, Krishna V | Journal of neurophysiology | 2013 Aug | 817-25 | 23699057 |
| Connection between Oligomeric State and Gating Characteristics of Mechanosensitive Ion Channels. | Haselwandter, Christoph A; Phillips, Rob | PLoS computational biology | 2013 May | e1003055 | 23696720 |
| Slow-sound photoacoustic microscopy. | Zhang, Chi; Zhou, Yong; Li, Chiye; Wang, Lihong V | Applied physics letters. | 2013 Apr 22; | 163702 | 23696693 |
| Perfusion Imaging of Focal Cortical Dysplasia Using Arterial Spin Labeling: Correlation With Histopathological Vascular Density. | Wintermark, Pia; Lechpammer, Mirna; Warfield, Simon K; Kosaras, Bela; Takeoka, Masanori; Poduri, Annapurna; Madsen, Joseph R; Bergin, Ann M; Whalen, Stephen; Jensen, Frances E | Journal of child neurology | 2013 Nov | 1474-1482 | 23696629 |
| Evolutionary dynamics and information hierarchies in biological systems. | Walker, Sara Imari; Callahan, Benjamin J; Arya, Gaurav; Barry, J David; Bhattacharya, Tanmoy; Grigoryev, Sergei; Pellegrini, Matteo; Rippe, Karsten; Rosenberg, Susan M | Annals of the New York Academy of Sciences | 2013 May 20 | 23691975 | |
| Functional diversity among sensory receptors in a Drosophila olfactory circuit. | Mathew, Dennis; Martelli, Carlotta; Kelley-Swift, Elizabeth; Brusalis, Christopher; Gershow, Marc; Samuel, Aravinthan D T; Emonet, Thierry; Carlson, John R | Proceedings of the National Academy of Sciences of the United States of America. | 2013 Jun 04; | 23690583 | |
| Fragment-based drug discovery using NMR spectroscopy. | Harner, Mary J; Frank, Andreas O; Fesik, Stephen W | Journal of biomolecular NMR | 2013 May 18 | 23686385 | |
| Comparative analysis of RNA sequencing methods for degraded or low-input samples. | Adiconis, Xian; Borges-Rivera, Diego; Satija, Rahul; Deluca, David S; Busby, Michele A; Berlin, Aaron M; Sivachenko, Andrey; Thompson, Dawn Anne; Wysoker, Alec; Fennell, Timothy; Gnirke, Andreas; Pochet, Nathalie; Regev, Aviv; Levin, Joshua Z | Nature methods | 2013 May 19 | 23685885 | |
| Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells. | Shalek, Alex K; Satija, Rahul; Adiconis, Xian; Gertner, Rona S; Gaublomme, Jellert T; Raychowdhury, Raktima; Schwartz, Schraga; Yosef, Nir; Malboeuf, Christine; Lu, Diana; Trombetta, John J; Gennert, Dave; Gnirke, Andreas; Goren, Alon; Hacohen, Nir; Levin | Nature | 2013 Jun 13 | 236-40 | 23685454 |
| An unsolved mystery: The target-recognizing RNA species of microRNA genes. | Chen, Chang-Zheng | Biochimie | 2013 May 14 | 23685275 | |
| Evaluation of the pathogenesis and treatment of Mycobacterium marinum infection in zebrafish. | Takaki, Kevin; Davis, J Muse; Winglee, Kathryn; Ramakrishnan, Lalita | Nature protocols. | 2013 Jun; | 1114-24 | 23680983 |
| Neural control of sexually dimorphic behaviors. | Manoli, Devanand S; Fan, Pu; Fraser, Eleanor J; Shah, Nirao M | Current opinion in neurobiology | 2013 Jun | 330-8 | 23680385 |
| Surpassing fundamental limits of oscillators using nonlinear resonators. | Villanueva, L G; Kenig, E; Karabalin, R B; Matheny, M H; Lifshitz, Ron; Cross, M C; Roukes, M L | Physical review letters | 2013 Apr 26 | 177208 | 23679770 |
| Activity-dependent gene expression in honey bee mushroom bodies in response to orientation flight. | Lutz, Claudia C; Robinson, Gene E | The Journal of experimental biology | 2013 Jun 1 | 2031-8 | 23678099 |
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