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The search results on this publication page are automated on a monthly schedule based on acknowledgement of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.
NIH Director's Pioneer Award Program (2676)
| Publication Title | Authors | Journal | Publication Date | Page No | PubMedID |
|---|---|---|---|---|---|
| Developmental and oncogenic programs in H3K27M gliomas dissected by single-cell RNA-seq. | Filbin, Mariella G; Tirosh, Itay; Hovestadt, Volker; Shaw, McKenzie L; Escalante, Leah E; Mathewson, Nathan D; Neftel, Cyril; Frank, Nelli; Pelton, Kristine; Hebert, Christine M; Haberler, Christine; Yizhak, Keren; Gojo, Johannes; Egervari, Kristof; Mount | Science (New York, N.Y.). | 2018 04 20; | 29674595 | |
| Amelioration of Neurosensory Structure and Function in Animal and Cellular Models of a Congenital Blindness. | Song, Ji Yun; Aravand, Puya; Nikonov, Sergei; Leo, Lanfranco; Lyubarsky, Arkady; Bennicelli, Jeannette L; Pan, Jieyan; Wei, Zhangyong; Shpylchak, Ivan; Herrera, Pamela; Bennett, Daniel J; Commins, Nicoletta; Maguire, Albert M; Pham, Jennifer; den Hollande | Molecular therapy : the journal of the American Society of Gene Therapy. | 2018 Mar 21; | 29673930 | |
| Recent progress in photoacoustic molecular imaging. | Yao, Junjie; Wang, Lihong V | Current opinion in chemical biology. | 2018 Apr 06; | 29631120 | |
| Mechanisms of cancer resistance in long-lived mammals. | Seluanov, Andrei; Gladyshev, Vadim N; Vijg, Jan; Gorbunova, Vera | Nature reviews. Cancer. | 2018 Apr 05; | 29622806 | |
| An Optical Neuron-Astrocyte Proximity Assay at Synaptic Distance Scales. | Octeau, J Christopher; Chai, Hua; Jiang, Ruotian; Bonanno, Shivan L; Martin, Kelsey C; Khakh, Baljit S | Neuron. | 2018 Apr 04; | 29621490 | |
| Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain. | Raj, Bushra; Wagner, Daniel E; McKenna, Aaron; Pandey, Shristi; Klein, Allon M; Shendure, Jay; Gagnon, James A; Schier, Alexander F | Nature biotechnology. | 2018 Jun; | 29608178 | |
| Interbrain cortical synchronization encodes multiple aspects of social interactions in monkey pairs. | Tseng, Po-He; Rajangam, Sankaranarayani; Lehew, Gary; Lebedev, Mikhail A; Nicolelis, Miguel A L | Scientific reports. | 2018 Mar 29; | 29599529 | |
| Fates Aligned: Origins and Mechanisms of Ventricular Conduction System and Ventricular Wall Development. | Goodyer, William R; Wu, Sean M | Pediatric cardiology. | 2018 Mar 28; | 29594502 | |
| Anti-CTLA-4 therapy requires an Fc domain for efficacy. | Ingram, Jessica R; Blomberg, Olga S; Rashidian, Mohammad; Ali, Lestat; Garforth, Scott; Fedorov, Elena; Fedorov, Alexander A; Bonanno, Jeffrey B; Le Gall, Camille; Crowley, Stephanie; Espinosa, Camilo; Biary, Tamara; Keliher, Edmund J; Weissleder, Ralph; | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Apr 10; | 29581255 | |
| Sirtuin activators and inhibitors: Promises, achievements, and challenges. | Dai, Han; Sinclair, David A; Ellis, James L; Steegborn, Clemens | Pharmacology & therapeutics. | 2018 Mar 22; | 29577959 | |
| Global remodeling of the mouse DNA methylome during aging and in response to calorie restriction. | Sziráki, András; Tyshkovskiy, Alexander; Gladyshev, Vadim N | Aging cell. | 2018 Mar 25; | 29575528 | |
| The African turquoise killifish: A research organism to study vertebrate aging and diapause. | Hu, Chi-Kuo; Brunet, Anne | Aging cell. | 2018 Jun; | 29573324 | |
| Impairment of an Endothelial NAD+-H2S Signaling Network Is a Reversible Cause of Vascular Aging. | Das, Abhirup; Huang, George X; Bonkowski, Michael S; Longchamp, Alban; Li, Catherine; Schultz, Michael B; Kim, Lynn-Jee; Osborne, Brenna; Joshi, Sanket; Lu, Yuancheng; Treviño-Villarreal, Jose Humberto; Kang, Myung-Jin; Hung, Tzong-Tyng; Lee, Brendan; Wil | Cell. | 2018 Mar 22; | 29570999 | |
| Amino Acid Restriction Triggers Angiogenesis via GCN2/ATF4 Regulation of VEGF and H2S Production. | Longchamp, Alban; Mirabella, Teodelinda; Arduini, Alessandro; MacArthur, Michael R; Das, Abhirup; Treviño-Villarreal, J Humberto; Hine, Christopher; Ben-Sahra, Issam; Knudsen, Nelson H; Brace, Lear E; Reynolds, Justin; Mejia, Pedro; Tao, Ming; Sharma, Gau | Cell. | 2018 Mar 22; | 29570992 | |
| A bright organic NIR-II nanofluorophore for three-dimensional imaging into biological tissues. | Wan, Hao; Yue, Jingying; Zhu, Shoujun; Uno, Takaaki; Zhang, Xiaodong; Yang, Qinglai; Yu, Kuai; Hong, Guosong; Wang, Junying; Li, Lulin; Ma, Zhuoran; Gao, Hongpeng; Zhong, Yeteng; Su, Jessica; Antaris, Alexander L; Xia, Yan; Luo, Jian; Liang, Yongye; Dai, Hongjie | Nature communications. | 2018 Mar 21; | 29563581 | |
| Personalized Imaging and Modeling Strategies for Arrhythmia Prevention and Therapy. | Trayanova, Natalia A; Boyle, Patrick M; Nikolov, Plamen P | Current opinion in biomedical engineering. | 2018 Mar; | 29546250 | |
| The cis-regulatory dynamics of embryonic development at single-cell resolution. | Cusanovich, Darren A; Reddington, James P; Garfield, David A; Daza, Riza M; Aghamirzaie, Delasa; Marco-Ferreres, Raquel; Pliner, Hannah A; Christiansen, Lena; Qiu, Xiaojie; Steemers, Frank J; Trapnell, Cole; Shendure, Jay; Furlong, Eileen E M | Nature. | 2018 Mar 22; | 29539636 | |
| The Biosynthesis of Lipooligosaccharide from Bacteroides thetaiotaomicron. | Jacobson, Amy N; Choudhury, Biswa P; Fischbach, Michael A | mBio. | 2018 Mar 13; | 29535205 | |
| Immunology of Uterine and Vaginal Mucosae: (Trends in Immunology 39, 302-314, 2018). | Zhou, Jordan Z; Way, Sing Sing; Chen, Kang | Trends in immunology. | 2018 Apr; | 29530651 | |
| Tissue-like Neural Probes for Understanding and Modulating the Brain. | Hong, Guosong; Viveros, Robert D; Zwang, Theodore J; Yang, Xiao; Lieber, Charles M | Biochemistry. | 2018 Mar 19; | 29529359 | |
| How to Build a Bacterial Cell: MreB as the Foreman of E. coli Construction. | Shi, Handuo; Bratton, Benjamin P; Gitai, Zemer; Huang, Kerwyn Casey | Cell. | 2018 Mar 08; | 29522748 | |
| Nicotinamide Improves Aspects of Healthspan, but Not Lifespan, in Mice. | Mitchell, Sarah J; Bernier, Michel; Aon, Miguel A; Cortassa, Sonia; Kim, Eun Young; Fang, Evandro F; Palacios, Hector H; Ali, Ahmed; Navas-Enamorado, Ignacio; Di Francesco, Andrea; Kaiser, Tamzin A; Waltz, Tyler B; Zhang, Ning; Ellis, James L; Elliott, Pe | Cell metabolism. | 2018 Mar 06; | 29514072 | |
| Therapeutic Potential of NAD-Boosting Molecules: The In Vivo Evidence. | Rajman, Luis; Chwalek, Karolina; Sinclair, David A | Cell metabolism. | 2018 Mar 06; | 29514064 | |
| A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters. | Piatkevich, Kiryl D; Jung, Erica E; Straub, Christoph; Linghu, Changyang; Park, Demian; Suk, Ho-Jun; Hochbaum, Daniel R; Goodwin, Daniel; Pnevmatikakis, Eftychios; Pak, Nikita; Kawashima, Takashi; Yang, Chao-Tsung; Rhoades, Jeffrey L; Shemesh, Or; Asano, Shoh; Yoon, Young-Gyu; Freifeld, Limor; Saulnier, Jessica L; Riegler, Clemens; Engert, Florian; Hughes, Thom; Drobizhev, Mikhail; Szabo, Balint; Ahrens, Misha B; Flavell, Steven W; Sabatini, Bernardo L; Boyden, Edward S | Nature chemical biology. | 2018 Apr; | 29483642 | |
| Relationship Between Fibrosis Detected on Late Gadolinium-Enhanced Cardiac Magnetic Resonance and Re-Entrant Activity Assessed With Electrocardiographic Imaging in Human Persistent Atrial Fibrillation. | Cochet, Hubert; Dubois, Rémi; Yamashita, Seigo; Al Jefairi, Nora; Berte, Benjamin; Sellal, Jean-Marc; Hooks, Darren; Frontera, Antonio; Amraoui, Sana; Zemoura, Adlane; Denis, Arnaud; Derval, Nicolas; Sacher, Frederic; Corneloup, Olivier; Latrabe, Valérie; Clément-Guinaudeau, Stéphanie; Relan, Jatin; Zahid, Sohail; Boyle, Patrick M; Trayanova, Natalia A; Bernus, Olivier; Montaudon, Michel; Laurent, François; Hocini, Mélèze; Haïssaguerre, Michel; Jaïs, Pierre | JACC. Clinical electrophysiology. | 2018 Jan; | 29479568 | |
| Changes in Ugandan Climate Rainfall at the Village and Forest Level. | Ssentongo, Paddy; Muwanguzi, Abraham J B; Eden, Uri; Sauer, Timothy; Bwanga, George; Kateregga, Geoffrey; Aribo, Lawrence; Ojara, Moses; Mugerwa, Wilberforce Kisamba; Schiff, Steven J | Scientific reports. | 2018 Feb 23; | 29476058 | |
| Unique Molecular Regulation of Higher-Order Prefrontal Cortical Circuits: Insights into the Neurobiology of Schizophrenia. | Datta, Dibyadeep; Arnsten, Amy F T | ACS chemical neuroscience. | 2018 Mar 01; | 29470055 | |
| Modifications and functional genomics of human transfer RNA. | Pan, Tao | Cell research. | 2018 Apr; | 29463900 | |
| OligoMiner provides a rapid, flexible environment for the design of genome-scale oligonucleotide in situ hybridization probes. | Beliveau, Brian J; Kishi, Jocelyn Y; Nir, Guy; Sasaki, Hiroshi M; Saka, Sinem K; Nguyen, Son C; Wu, Chao-Ting; Yin, Peng | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Mar 06; | 29463736 | |
| QFMatch: multidimensional flow and mass cytometry samples alignment. | Orlova, Darya Y; Meehan, Stephen; Parks, David; Moore, Wayne A; Meehan, Connor; Zhao, Qian; Ghosn, Eliver E B; Herzenberg, Leonore A; Walther, Guenther | Scientific reports. | 2018 Feb 19; | 29459702 | |
| On the design of CRISPR-based single-cell molecular screens. | Hill, Andrew J; McFaline-Figueroa, José L; Starita, Lea M; Gasperini, Molly J; Matreyek, Kenneth A; Packer, Jonathan; Jackson, Dana; Shendure, Jay; Trapnell, Cole | Nature methods. | 2018 Apr; | 29457792 | |
| Multiplexed and portable nucleic acid detection platform with Cas13, Cas12a, and Csm6. | Gootenberg, Jonathan S; Abudayyeh, Omar O; Kellner, Max J; Joung, Julia; Collins, James J; Zhang, Feng | Science (New York, N.Y.). | ; | 29449508 | |
| 3D NIR-II Molecular Imaging Distinguishes Targeted Organs with High-Performance NIR-II Bioconjugates. | Zhu, Shoujun; Herraiz, Sonia; Yue, Jingying; Zhang, Mingxi; Wan, Hao; Yang, Qinglai; Ma, Zhuoran; Wang, Yan; He, Jiahuan; Antaris, Alexander L; Zhong, Yeteng; Diao, Shuo; Feng, Yi; Zhou, Ying; Yu, Kuai; Hong, Guosong; Liang, Yongye; Hsueh, Aaron J; Dai, Hongjie | Advanced materials (Deerfield Beach, Fla.). | 2018 Mar; | 29446156 | |
| A spatial gradient of bacterial diversity in the human oral cavity shaped by salivary flow. | Proctor, Diana M; Fukuyama, Julia A; Loomer, Peter M; Armitage, Gary C; Lee, Stacey A; Davis, Nicole M; Ryder, Mark I; Holmes, Susan P; Relman, David A | Nature communications. | ; | 29445174 | |
| Label-free cell nuclear imaging by Grüneisen relaxation photoacoustic microscopy. | Liu, Xiaowei; Wong, Terence T W; Shi, Junhui; Ma, Jun; Yang, Qing; Wang, Lihong V | Optics letters. | 2018 Feb 15; | 29444034 | |
| Efficient derivation of stable primed pluripotent embryonic stem cells from bovine blastocysts. | Bogliotti, Yanina Soledad; Wu, Jun; Vilarino, Marcela; Okamura, Daiji; Soto, Delia Alba; Zhong, Cuiqing; Sakurai, Masahiro; Sampaio, Rafael Vilar; Suzuki, Keiichiro; Izpisua Belmonte, Juan Carlos; Ross, Pablo Juan | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Feb 27; | 29440377 | |
| Naked mole rats can undergo developmental, oncogene-induced and DNA damage-induced cellular senescence. | Zhao, Yang; Tyshkovskiy, Alexander; Muñoz-Espín, Daniel; Tian, Xiao; Serrano, Manuel; de Magalhaes, Joao Pedro; Nevo, Eviatar; Gladyshev, Vadim N; Seluanov, Andrei; Gorbunova, Vera | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Feb 20; | 29432174 | |
| Survival analysis with functions of mismeasured covariate histories: the case of chronic air pollution exposure in relation to mortality in the nurses' health study. | Liao, Xiaomei; Zhou, Xin; Wang, Molin; Hart, Jaime E; Laden, Francine; Spiegelman, Donna | Journal of the Royal Statistical Society. Series C, Applied statistics. | 2018 Feb; | 29430064 | |
| Emotion fingerprints or emotion populations? A meta-analytic investigation of autonomic features of emotion categories. | Siegel, Erika H; Sands, Molly K; Van den Noortgate, Wim; Condon, Paul; Chang, Yale; Dy, Jennifer; Quigley, Karen S; Barrett, Lisa Feldman | Psychological bulletin. | 2018 Apr; | 29389177 | |
| Contextual control of skin immunity and inflammation by Corynebacterium. | Ridaura, Vanessa K; Bouladoux, Nicolas; Claesen, Jan; Chen, Y Erin; Byrd, Allyson L; Constantinides, Michael G; Merrill, Eric D; Tamoutounour, Samira; Fischbach, Michael A; Belkaid, Yasmine | The Journal of experimental medicine. | 2018 Mar 05; | 29382696 | |
| Mesh Nanoelectronics: Seamless Integration of Electronics with Tissues. | Dai, Xiaochuan; Hong, Guosong; Gao, Teng; Lieber, Charles M | Accounts of chemical research. | 2018 Feb 20; | 29381054 | |
| A statistical model for improved membrane protein expression using sequence-derived features. | Saladi, Shyam M; Javed, Nauman; Müller, Axel; Clemons Jr., William M | The Journal of biological chemistry. | 2018 Mar 30; | 29378850 | |
| Genome Mining and Assembly-Line Biosynthesis of the UCS1025A Pyrrolizidinone Family of Fungal Alkaloids. | Li, Li; Tang, Man-Cheng; Tang, Shoubin; Gao, Shushan; Soliman, Sameh; Hang, Leibniz; Xu, Wei; Ye, Tao; Watanabe, Kenji; Tang, Yi | Journal of the American Chemical Society. | 2018 Feb 14; | 29373009 | |
| Mitochondrial translation requires folate-dependent tRNA methylation. | Morscher, Raphael J; Ducker, Gregory S; Li, Sophia Hsin-Jung; Mayer, Johannes A; Gitai, Zemer; Sperl, Wolfgang; Rabinowitz, Joshua D | Nature. | 2018 Feb 01; | 29364879 | |
| Core Differences in Synaptic Signaling Between Primary Visual and Dorsolateral Prefrontal Cortex. | Yang, Sheng-Tao; Wang, Min; Paspalas, Constantinos D; Crimins, Johanna L; Altman, Marcus T; Mazer, James A; Arnsten, Amy F T | Cerebral cortex (New York, N.Y. : 1991). | 2018 Apr 01; | 29351585 | |
| Brain activity patterns in high-throughput electrophysiology screen predict both drug efficacies and side effects. | Eimon, Peter M; Ghannad-Rezaie, Mostafa; De Rienzo, Gianluca; Allalou, Amin; Wu, Yuelong; Gao, Mu; Roy, Ambrish; Skolnick, Jeffrey; Yanik, Mehmet Fatih | Nature communications. | ; | 29335539 | |
| Single-impulse Panoramic Photoacoustic Computed Tomography of Small-animal Whole-body Dynamics at High Spatiotemporal Resolution. | Li, Lei; Zhu, Liren; Ma, Cheng; Lin, Li; Yao, Junjie; Wang, Lidai; Maslov, Konstantin; Zhang, Ruiying; Chen, Wanyi; Shi, Junhui; Wang, Lihong V | Nature biomedical engineering. | 2017; | 29333331 | |
| Using Genome Sequence to Enable the Design of Medicines and Chemical Probes. | Angelbello, Alicia J; Chen, Jonathan L; Childs-Disney, Jessica L; Zhang, Peiyuan; Wang, Zi-Fu; Disney, Matthew D | Chemical reviews. | 2018 Feb 28; | 29322778 | |
| Time-reversed ultrasonically encoded optical focusing through highly scattering ex vivo human cataractous lenses. | Liu, Yan; Shen, Yuecheng; Ruan, Haowen; Brodie, Frank L; Wong, Terence T W; Yang, Changhuei; Wang, Lihong V | Journal of biomedical optics. | 2018 Jan; | 29322749 | |
| Integration of Plasticity Mechanisms within a Single Sensory Neuron of C. elegans Actuates a Memory. | Hawk, Josh D; Calvo, Ana C; Liu, Ping; Almoril-Porras, Agustin; Aljobeh, Ahmad; Torruella-Suárez, María Luisa; Ren, Ivy; Cook, Nathan; Greenwood, Joel; Luo, Linjiao; Wang, Zhao-Wen; Samuel, Aravinthan D T; Colón-Ramos, Daniel A | Neuron. | 2018 Jan 17; | 29307713 | |
| Incomplete prophage tolerance by type III-A CRISPR-Cas systems reduces the fitness of lysogenic hosts. | Goldberg, Gregory W; McMillan, Elizabeth A; Varble, Andrew; Modell, Joshua W; Samai, Poulami; Jiang, Wenyan; Marraffini, Luciano A | Nature communications. | 2018 01 04; | 29302058 | |
| Rlim-Dependent and -Independent Pathways for X Chromosome Inactivation in Female ESCs. | Wang, Feng; McCannell, Kurtis N; Bo?kovi?, Ana; Zhu, Xiaochun; Shin, JongDae; Yu, Jun; Gallant, Judith; Byron, Meg; Lawrence, Jeanne B; Zhu, Lihua J; Jones, Stephen N; Rando, Oliver J; Fazzio, Thomas G; Bach, Ingolf | Cell reports. | 2017 Dec 26; | 29281819 | |
| Evidence for Long-Timescale Patterns of Synaptic Inputs in CA1 of Awake Behaving Mice. | Kolb, Ilya; Talei Franzesi, Giovanni; Wang, Michael; Kodandaramaiah, Suhasa B; Forest, Craig R; Boyden, Edward S; Singer, Annabelle C | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2018 Feb 14; | 29279309 | |
| The Emergence and Collapse of Knowledge Boundaries. | Broniatowski, David A; Magee, Christopher L | IEEE transactions on engineering management. | 2017 Aug; | 29255326 | |
| Orthologous CRISPR-Cas9 enzymes for combinatorial genetic screens. | Najm, Fadi J; Strand, Christine; Donovan, Katherine F; Hegde, Mudra; Sanson, Kendall R; Vaimberg, Emma W; Sullender, Meagan E; Hartenian, Ella; Kalani, Zohra; Fusi, Nicolo; Listgarten, Jennifer; Younger, Scott T; Bernstein, Bradley E; Root, David E; Doench, John G | Nature biotechnology. | 2017 Dec 18; | 29251726 | |
| High-speed single-shot optical focusing through dynamic scattering media with full-phase wavefront shaping. | Hemphill, Ashton S; Shen, Yuecheng; Liu, Yan; Wang, Lihong V | Applied physics letters. | 2017 Nov 27; | 29249832 | |
| Regulation of regeneration by Heparan Sulfate Proteoglycans in the Extracellular Matrix. | Gardiner, David M | Regenerative engineering and translational medicine. | 2017 Sep; | 29242821 | |
| The aged rhesus macaque manifests Braak stage III/IV Alzheimer's-like pathology. | Paspalas, Constantinos D; Carlyle, Becky C; Leslie, Shannon; Preuss, Todd M; Crimins, Johanna L; Huttner, Anita J; van Dyck, Christopher H; Rosene, Douglas L; Nairn, Angus C; Arnsten, Amy F T | Alzheimer's & dementia : the journal of the Alzheimer's Association. | 2017 Dec 11; | 29241829 | |
| Akt regulation of glycolysis mediates bioenergetic stability in epithelial cells. | Hung, Yin P; Teragawa, Carolyn; Kosaisawe, Nont; Gillies, Taryn E; Pargett, Michael; Minguet, Marta; Distor, Kevin; Rocha-Gregg, Briana L; Coloff, Jonathan L; Keibler, Mark A; Stephanopoulos, Gregory; Yellen, Gary; Brugge, Joan S; Albeck, John G | eLife. | 2017 Dec 14; | 29239720 | |
| The Axolotl Limb Regeneration Model as a Discovery Tool for Engineering the Stem Cell Niche. | Seyedhassantehrani, Negar; Otsuka, Takayoshi; Singh, Shambhavi; Gardiner, David M | Current stem cell reports. | 2017 Sep; | 29230380 | |
| Quantitative Missense Variant Effect Prediction Using Large-Scale Mutagenesis Data. | Gray, Vanessa E; Hause, Ronald J; Luebeck, Jens; Shendure, Jay; Fowler, Douglas M | Cell systems. | 2018 Jan 24; | 29226803 | |
| A Bioreactor Method to Generate High-titer, Genetically Stable, Clinical-isolate Human Cytomegalovirus. | Saykally, Victoria R; Rast, Luke I; Sasaki, Jeff; Jung, Seung-Yong; Bolovan-Fritts, Cynthia; Weinberger, Leor S | Bio-protocol. | 2017 Nov 05; | 29226181 | |
| Nodal patterning without Lefty inhibitory feedback is functional but fragile. | Rogers, Katherine W; Lord, Nathan D; Gagnon, James A; Pauli, Andrea; Zimmerman, Steven; Aksel, Deniz C; Reyon, Deepak; Tsai, Shengdar Q; Joung, J Keith; Schier, Alexander F | eLife. | 2017 Dec 07; | 29215332 | |
| Focusing light through scattering media by polarization modulation based generalized digital optical phase conjugation. | Yang, Jiamiao; Shen, Yuecheng; Liu, Yan; Hemphill, Ashton S; Wang, Lihong V | Applied physics letters. | 2017 Nov 13; | 29203931 | |
| Mesh electronics: a new paradigm for tissue-like brain probes. | Hong, Guosong; Yang, Xiao; Zhou, Tao; Lieber, Charles M | Current opinion in neurobiology. | 2017 Dec 01; | 29202327 | |
| Single-Cell Transcriptomic Analysis of Primary and Metastatic Tumor Ecosystems in Head and Neck Cancer. | Puram, Sidharth V; Tirosh, Itay; Parikh, Anuraag S; Patel, Anoop P; Yizhak, Keren; Gillespie, Shawn; Rodman, Christopher; Luo, Christina L; Mroz, Edmund A; Emerick, Kevin S; Deschler, Daniel G; Varvares, Mark A; Mylvaganam, Ravi; Rozenblatt-Rosen, Orit; Rocco, James W; Faquin, William C; Lin, Derrick T; Regev, Aviv; Bernstein, Bradley E | Cell. | 2017 Dec 14; | 29198524 | |
| The Pore-Forming Protein Gasdermin D Regulates Interleukin-1 Secretion from Living Macrophages. | Evavold, Charles L; Ruan, Jianbin; Tan, Yunhao; Xia, Shiyu; Wu, Hao; Kagan, Jonathan C | Immunity. | 2018 Jan 16; | 29195811 | |
| A craniofacial-specific monosynaptic circuit enables heightened affective pain. | Rodriguez, Erica; Sakurai, Katsuyasu; Xu, Jennie; Chen, Yong; Toda, Koji; Zhao, Shengli; Han, Bao-Xia; Ryu, David; Yin, Henry; Liedtke, Wolfgang; Wang, Fan | Nature neuroscience. | 2017 Dec; | 29184209 | |
| Temporally precise single-cell-resolution optogenetics. | Shemesh, Or A; Tanese, Dimitrii; Zampini, Valeria; Linghu, Changyang; Piatkevich, Kiryl; Ronzitti, Emiliano; Papagiakoumou, Eirini; Boyden, Edward S; Emiliani, Valentina | Nature neuroscience. | 2017 Dec; | 29184208 | |
| Label-free photoacoustic tomography of whole mouse brain structures ex vivo. | Li, Lei; Xia, Jun; Li, Guo; Garcia-Uribe, Alejandro; Sheng, Qiwei; Anastasio, Mark A; Wang, Lihong V | Neurophotonics. | 2016 Jul; | 29181425 | |
| cGAS drives noncanonical-inflammasome activation in age-related macular degeneration. | Kerur, Nagaraj; Fukuda, Shinichi; Banerjee, Daipayan; Kim, Younghee; Fu, Dongxu; Apicella, Ivana; Varshney, Akhil; Yasuma, Reo; Fowler, Benjamin J; Baghdasaryan, Elmira; Marion, Kenneth M; Huang, Xiwen; Yasuma, Tetsuhiro; Hirano, Yoshio; Serbulea, Vlad; Ambati, Meenakshi; Ambati, Vidya L; Kajiwara, Yuji; Ambati, Kameshwari; Hirahara, Shuichiro; Bastos-Carvalho, Ana; Ogura, Yuichiro; Terasaki, Hiroko; Oshika, Tetsuro; Kim, Kyung Bo; Hinton, David R; Leitinger, Norbert; Cambier, John C; Buxbaum, Joseph D; Kenney, M Cristina; Jazwinski, S Michal; Nagai, Hiroshi; Hara, Isao; West, A Phillip; Fitzgerald, Katherine A; Sadda, SriniVas R; Gelfand, Bradley D; Ambati, Jayakrishna | Nature medicine. | 2018 Jan; | 29176737 | |
| Commensal Fungi Recapitulate the Protective Benefits of Intestinal Bacteria. | Jiang, Tony T; Shao, Tzu-Yu; Ang, W X Gladys; Kinder, Jeremy M; Turner, Lucien H; Pham, Giang; Whitt, Jordan; Alenghat, Theresa; Way, Sing Sing | Cell host & microbe. | 2017 Dec 13; | 29174402 | |
| BAD knockout provides metabolic seizure resistance in a genetic model of epilepsy with sudden unexplained death in epilepsy. | Foley, Jeannine; Burnham, Veronica; Tedoldi, Meghan; Danial, Nika N; Yellen, Gary | Epilepsia. | 2018 Jan; | 29171006 | |
| In vitro AMPylation Assays Using Purified, Recombinant Proteins. | Truttmann, Matthias C; Ploegh, Hidde L | Bio-protocol. | 2017 Jul 20; | 29170749 | |
| A gut bacterial pathway metabolizes aromatic amino acids into nine circulating metabolites. | Dodd, Dylan; Spitzer, Matthew H; Van Treuren, William; Merrill, Bryan D; Hryckowian, Andrew J; Higginbottom, Steven K; Le, Anthony; Cowan, Tina M; Nolan, Garry P; Fischbach, Michael A; Sonnenburg, Justin L | Nature. | 2017 11 30; | 29168502 | |
| Evaluating Public Health Interventions: 7. Let the Subject Matter Choose the Effect Measure: Ratio, Difference, or Something Else Entirely. | Spiegelman, Donna; Khudyakov, Polyna; Wang, Molin; Vanderweele, Tyler J | American journal of public health. | 2018 Jan; | 29161073 | |
| Improving Metabolic Health Through Precision Dietetics in Mice. | Barrington, William T; Wulfridge, Phillip; Wells, Ann E; Rojas, Carolina Mantilla; Howe, Selene Y F; Perry, Amie; Hua, Kunjie; Pellizzon, Michael A; Hansen, Kasper D; Voy, Brynn H; Bennett, Brian J; Pomp, Daniel; Feinberg, Andrew P; Threadgill, David W | Genetics. | 2018 Jan; | 29158425 | |
| Skeletal muscle overexpression of nicotinamide phosphoribosyl transferase in mice coupled with voluntary exercise augments exercise endurance. | Costford, Sheila R; Brouwers, Bram; Hopf, Meghan E; Sparks, Lauren M; Dispagna, Mauro; Gomes, Ana P; Cornnell, Heather H; Petucci, Chris; Phelan, Peter; Xie, Hui; Yi, Fanchao; Walter, Glenn A; Osborne, Timothy F; Sinclair, David A; Mynatt, Randall L; Ayala, Julio E; Gardell, Stephen J; Smith, Steven R | Molecular metabolism. | 2018 Jan; | 29146412 | |
| Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans. | Daugherty, Aaron C; Yeo, Robin W; Buenrostro, Jason D; Greenleaf, William J; Kundaje, Anshul; Brunet, Anne | Genome research. | 2017 Dec; | 29141961 | |
| Label-free automated three-dimensional imaging of whole organs by microtomy-assisted photoacoustic microscopy. | Wong, Terence T W; Zhang, Ruiying; Zhang, Chi; Hsu, Hsun-Chia; Maslov, Konstantin I; Wang, Lidai; Shi, Junhui; Chen, Ruimin; Shung, K Kirk; Zhou, Qifa; Wang, Lihong V | Nature communications. | 2017 Nov 09; | 29123109 | |
| Nicotinamide mononucleotide (NMN) supplementation ameliorates the impact of maternal obesity in mice: comparison with exercise. | Uddin, Golam Mezbah; Youngson, Neil A; Doyle, Bronte M; Sinclair, David A; Morris, Margaret J | Scientific reports. | 2017 Nov 08; | 29118320 | |
| Feasibility of 3D Reconstruction of Neural Morphology Using Expansion Microscopy and Barcode-Guided Agglomeration. | Yoon, Young-Gyu; Dai, Peilun; Wohlwend, Jeremy; Chang, Jae-Byum; Marblestone, Adam H; Boyden, Edward S | Frontiers in computational neuroscience. | 2017; | 29114215 | |
| Naked Mole Rat Induced Pluripotent Stem Cells and Their Contribution to Interspecific Chimera. | Lee, Sang-Goo; Mikhalchenko, Aleksei E; Yim, Sun Hee; Lobanov, Alexei V; Park, Jin-Kyu; Choi, Kwang-Hwan; Bronson, Roderick T; Lee, Chang-Kyu; Park, Thomas J; Gladyshev, Vadim N | Stem cell reports. | 2017 Nov 14; | 29107591 | |
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| Nkx2.5+?Cardiomyoblasts Contribute to Cardiomyogenesis in the Neonatal Heart. | Serpooshan, Vahid; Liu, Yuan-Hung; Buikema, Jan W; Galdos, Francisco X; Chirikian, Orlando; Paige, Sharon; Venkatraman, Sneha; Kumar, Anusha; Rawnsley, David R; Huang, Xiaojing; Pijnappels, Daniël A; Wu, Sean M | Scientific reports. | 2017 Oct 03; | 28974782 | |
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| Sensitivity of reentrant driver localization to electrophysiological parameter variability in image-based computational models of persistent atrial fibrillation sustained by a fibrotic substrate. | Deng, Dongdong; Murphy, Michael J; Hakim, Joe B; Franceschi, William H; Zahid, Sohail; Pashakhanloo, Farhad; Trayanova, Natalia A; Boyle, Patrick M | Chaos (Woodbury, N.Y.). | 2017 Sep; | 28964164 | |
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| Enhanced Nociception in Angelman Syndrome Model Mice. | McCoy, Eric S; Taylor-Blake, Bonnie; Aita, Megumi; Simon, Jeremy M; Philpot, Benjamin D; Zylka, Mark J | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2017 Oct 18; | 28931574 | |
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| Metabolic crosstalk regulates Porphyromonas gingivalis colonization and virulence during oral polymicrobial infection. | Kuboniwa, Masae; Houser, John R; Hendrickson, Erik L; Wang, Qian; Alghamdi, Samar A; Sakanaka, Akito; Miller, Daniel P; Hutcherson, Justin A; Wang, Tiansong; Beck, David A C; Whiteley, Marvin; Amano, Atsuo; Wang, Huizhi; Marcotte, Edward M; Hackett, Murray; Lamont, Richard J | Nature microbiology. | 2017 Nov; | 28924191 | |
| mTOR Inhibition Restores Amino Acid Balance in Cells Dependent on Catabolism of Extracellular Protein. | Nofal, Michel; Zhang, Kevin; Han, Seunghun; Rabinowitz, Joshua D | Molecular cell. | 2017 Sep 21; | 28918901 | |
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| Selenocysteine tRNA[Ser]Sec, the Central Component of Selenoprotein Biosynthesis: Isolation, Identification, Modification, and Sequencing. | Carlson, Bradley A; Lee, Byeong Jae; Tsuji, Petra A; Copeland, Paul R; Schweizer, Ulrich; Gladyshev, Vadim N; Hatfield, Dolph L | Methods in molecular biology (Clifton, N.J.). | 2018; | 28917036 | |
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| Distinct roles for motor neuron autophagy early and late in the SOD1G93A mouse model of ALS. | Rudnick, Noam D; Griffey, Christopher J; Guarnieri, Paolo; Gerbino, Valeria; Wang, Xueyong; Piersaint, Jason A; Tapia, Juan Carlos; Rich, Mark M; Maniatis, Tom | Proceedings of the National Academy of Sciences of the United States of America. | 2017 Sep 26; | 28904095 | |
| SAM-dependent enzyme-catalysed pericyclic reactions in natural product biosynthesis. | Ohashi, Masao; Liu, Fang; Hai, Yang; Chen, Mengbin; Tang, Man-Cheng; Yang, Zhongyue; Sato, Michio; Watanabe, Kenji; Houk, K N; Tang, Yi | Nature. | 2017 Sep 28; | 28902839 | |
| Machine Learning Analysis Identifies Drosophila Grunge/Atrophin as an Important Learning and Memory Gene Required for Memory Retention and Social Learning. | Kacsoh, Balint Z; Greene, Casey S; Bosco, Giovanni | G3 (Bethesda, Md.). | 2017 Nov 06; | 28889104 | |
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| Reversible Reaction-Based Fluorescent Probe for Real-Time Imaging of Glutathione Dynamics in Mitochondria. | Chen, Jianwei; Jiang, Xiqian; Zhang, Chengwei; MacKenzie, Kevin R; Stossi, Fabio; Palzkill, Timothy; Wang, Meng C; Wang, Jin | ACS sensors. | 2017 Sep 22; | 28809477 | |
| AAV-mediated direct in vivo CRISPR screen identifies functional suppressors in glioblastoma. | Chow, Ryan D; Guzman, Christopher D; Wang, Guangchuan; Schmidt, Florian; Youngblood, Mark W; Ye, Lupeng; Errami, Youssef; Dong, Matthew B; Martinez, Michael A; Zhang, Sensen; Renauer, Paul; Bilguvar, Kaya; Gunel, Murat; Sharp, Phillip A; Zhang, Feng; Platt, Randall J; Chen, Sidi | Nature neuroscience. | 2017 Oct; | 28805815 | |
| Sonofragmentation of Ultrathin 1D Nanomaterials. | Gao, Ruixuan; Gupta, Ishan; Boyden, Edward S | Particle & particle systems characterization : measurement and description of particle properties and behavior in powders and other disperse systems. | 2017 Jan; | 28804214 | |
| Distinct Cellular Mechanisms Underlie Anti-CTLA-4 and Anti-PD-1 Checkpoint Blockade. | Wei, Spencer C; Levine, Jacob H; Cogdill, Alexandria P; Zhao, Yang; Anang, Nana-Ama A S; Andrews, Miles C; Sharma, Padmanee; Wang, Jing; Wargo, Jennifer A; Pe'er, Dana; Allison, James P | Cell. | 2017 Sep 07; | 28803728 | |
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| Neuronal Stimulation Triggers Neuronal Glycolysis and Not Lactate Uptake. | Díaz-García, Carlos Manlio; Mongeon, Rebecca; Lahmann, Carolina; Koveal, Dorothy; Zucker, Hannah; Yellen, Gary | Cell metabolism. | 2017 Aug 01; | 28768175 | |
| Ribosome Rescue Inhibitors Kill Actively Growing and Nonreplicating Persister Mycobacterium tuberculosis Cells. | Alumasa, John N; Manzanillo, Paolo S; Peterson, Nicholas D; Lundrigan, Tricia; Baughn, Anthony D; Cox, Jeffery S; Keiler, Kenneth C | ACS infectious diseases. | 2017 Sep 08; | 28762275 | |
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| Expression and Purification of Active Recombinant Human Alpha-1 Antitrypsin (AAT) from Escherichia coli. | Krishnan, Beena; Hedstrom, Lizbeth; Hebert, Daniel N; Gierasch, Lila M; Gershenson, Anne | Methods in molecular biology (Clifton, N.J.). | 2017; | 28752459 | |
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| ChromEMT: Visualizing 3D chromatin structure and compaction in interphase and mitotic cells. | Ou, Horng D; Phan, Sébastien; Deerinck, Thomas J; Thor, Andrea; Ellisman, Mark H; O'Shea, Clodagh C | Science (New York, N.Y.). | 2017 07 28; | 28751582 | |
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| Neural Circuit-Specialized Astrocytes: Transcriptomic, Proteomic, Morphological, and Functional Evidence. | Chai, Hua; Diaz-Castro, Blanca; Shigetomi, Eiji; Monte, Emma; Octeau, J Christopher; Yu, Xinzhu; Cohn, Whitaker; Rajendran, Pradeep S; Vondriska, Thomas M; Whitelegge, Julian P; Coppola, Giovanni; Khakh, Baljit S | Neuron. | 2017 Jul 11; | 28712653 | |
| Efficacy and safety of voretigene neparvovec (AAV2-hRPE65v2) in patients with RPE65-mediated inherited retinal dystrophy: a randomised, controlled, open-label, phase 3 trial. | Russell, Stephen; Bennett, Jean; Wellman, Jennifer A; Chung, Daniel C; Yu, Zi-Fan; Tillman, Amy; Wittes, Janet; Pappas, Julie; Elci, Okan; McCague, Sarah; Cross, Dominique; Marshall, Kathleen A; Walshire, Jean; Kehoe, Taylor L; Reichert, Hannah; Davis, Maria; Raffini, Leslie; George, Lindsey A; Hudson, F Parker; Dingfield, Laura; Zhu, Xiaosong; Haller, Julia A; Sohn, Elliott H; Mahajan, Vinit B; Pfeifer, Wanda; Weckmann, Michelle; Johnson, Chris; Gewaily, Dina; Drack, Arlene; Stone, Edwin; Wachtel, Katie; Simonelli, Francesca; Leroy, Bart P; Wright, J Fraser; High, Katherine A; Maguire, Albert M | Lancet (London, England). | 2017 Aug 26; | 28712537 | |
| CRISPR/Cas9-Mediated Scanning for Regulatory Elements Required for HPRT1 Expression via Thousands of Large, Programmed Genomic Deletions. | Gasperini, Molly; Findlay, Gregory M; McKenna, Aaron; Milbank, Jennifer H; Lee, Choli; Zhang, Melissa D; Cusanovich, Darren A; Shendure, Jay | American journal of human genetics. | 2017 Aug 03; | 28712454 | |
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| A novel mechanism for mechanosensory-based rheotaxis in larval zebrafish. | Oteiza, Pablo; Odstrcil, Iris; Lauder, George; Portugues, Ruben; Engert, Florian | Nature. | 2017 07 27; | 28700578 | |
| Novel mobility test to assess functional vision in patients with inherited retinal dystrophies. | Chung, Daniel C; McCague, Sarah; Yu, Zi-Fan; Thill, Satha; DiStefano-Pappas, Julie; Bennett, Jean; Cross, Dominique; Marshall, Kathleen; Wellman, Jennifer; High, Katherine A | Clinical & experimental ophthalmology. | 2017 Jul 11; | 28697537 | |
| Thermoneutrality but not UCP1 Deficiency Suppresses Monocyte Mobilization into Blood. | Williams, Jesse W; Elvington, Andrew F; Ivanov, Stoyan; Kessler, Skyler; Luehmann, Hannah; Baba, Osamu; Saunders, Brian T; Kim, Ki-Wook; Johnson, Michael W; Craft, Clarissa S; Choi, Jae-Hoon; Sorci-Thomas, Mary G; Zinselmeyer, Bernd H; Brestoff, Jonathan | Circulation research. | 2017 Jul 10; | 28696252 | |
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| Reversible Product Release and Recapture by a Fungal Polyketide Synthase Using a Carnitine Acyltransferase Domain. | Hang, Leibniz; Tang, Man-Cheng; Harvey, Colin J B; Page, Claire G; Li, Jian; Hung, Yiu-Sun; Liu, Nicholas; Hillenmeyer, Maureen E; Tang, Yi | Angewandte Chemie (International ed. in English). | 2017 Aug 01; | 28679030 | |
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| Epithelial-to-Mesenchymal Transition Contributes to Immunosuppression in Breast Carcinomas. | Dongre, Anushka; Rashidian, Mohammad; Reinhardt, Ferenc; Bagnato, Aaron; Keckesova, Zuzana; Ploegh, Hidde L; Weinberg, Robert A | Cancer research. | 2017 Aug 01; | 28428275 | |
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| Blood-Brain Barrier Permeability Is Regulated by Lipid Transport-Dependent Suppression of Caveolae-Mediated Transcytosis. | Andreone, Benjamin J; Chow, Brian Wai; Tata, Aleksandra; Lacoste, Baptiste; Ben-Zvi, Ayal; Bullock, Kevin; Deik, Amy A; Ginty, David D; Clish, Clary B; Gu, Chenghua | Neuron. | 2017 Apr 11; | 28416077 | |
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| Resveratrol Improves Vascular Function and Mitochondrial Number but Not Glucose Metabolism in Older Adults. | Pollack, Rena M; Barzilai, Nir; Anghel, Valentin; Kulkarni, Ameya S; Golden, Aaron; O'Broin, Pilib; Sinclair, David A; Bonkowski, Michael S; Coleville, Alexander J; Powell, Danielle; Kim, Sharon; Moaddel, Ruin; Stein, Daniel; Zhang, Kehao; Hawkins, Meredi | The journals of gerontology. Series A, Biological sciences and medical sciences. | 2017 Nov 09; | 28329397 | |
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| Intra-Cluster Correlation Estimates for HIV-related Outcomes from Care and Treatment Clinics in Dar es Salaam, Tanzania. | Barnhart, Dale; Hertzmark, Ellen; Liu, Enju; Mungure, Ester; Muya, Aisa N; Sando, David; Chalamilla, Guerino; Ulenga, Nzovu; Bärnighausen, Till; Fawzi, Wafaie; Spiegelman, Donna | Contemporary clinical trials communications. | 2016 Dec 15; | 27766318 | |
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| Lymphoid Aggregates Remodel Lymphatic Collecting Vessels that Serve Mesenteric Lymph Nodes in Crohn Disease. | Randolph, Gwendalyn J; Bala, Shashi; Rahier, Jean-François; Johnson, Michael W; Wang, Peter L; Nalbantoglu, ILKe; Dubuquoy, Laurent; Chau, Amélie; Pariente, Benjamin; Kartheuser, Alex; Zinselmeyer, Bernd H; Colombel, Jean-Frederic | The American journal of pathology. | 2016 Dec; | 27746181 | |
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| The Clustered, Regularly Interspaced, Short Palindromic Repeats-associated Endonuclease 9 (CRISPR/Cas9)-created MDM2 T309G Mutation Enhances Vitreous-induced Expression of MDM2 and Proliferation and Survival of Cells. | Duan, Yajian; Ma, Gaoen; Huang, Xionggao; D'Amore, Patricia A; Zhang, Feng; Lei, Hetian | The Journal of biological chemistry. | 2016 07 29; | 27246850 | |
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| Topoisomerase 1 Regulates Gene Expression in Neurons through Cleavage Complex-Dependent and -Independent Mechanisms. | Mabb, Angela M; Simon, Jeremy M; King, Ian F; Lee, Hyeong-Min; An, Lin-Kun; Philpot, Benjamin D; Zylka, Mark J | PloS one. | 2016; | 27231886 | |
| Isocitrate Dehydrogenase Mutations Confer Dasatinib Hypersensitivity and SRC Dependence in Intrahepatic Cholangiocarcinoma. | Saha, Supriya K; Gordan, John D; Kleinstiver, Benjamin P; Vu, Phuong; Najem, Mortada S; Yeo, Jia-Chi; Shi, Lei; Kato, Yasutaka; Levin, Rebecca S; Webber, James T; Damon, Leah J; Egan, Regina K; Greninger, Patricia; McDermott, Ultan; Garnett, Mathew J; Jenkins, Roger L; Rieger-Christ, Kimberly M; Sullivan, Travis B; Hezel, Aram F; Liss, Andrew S; Mizukami, Yusuke; Goyal, Lipika; Ferrone, Cristina R; Zhu, Andrew X; Joung, J Keith; Shokat, Kevan M; Benes, Cyril H; Bardeesy, Nabeel | Cancer discovery. | 2016 07; | 27231123 | |
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| High-Throughput, High-Resolution Mapping of Protein Localization in Mammalian Brain by In Vivo Genome Editing. | Mikuni, Takayasu; Nishiyama, Jun; Sun, Ye; Kamasawa, Naomi; Yasuda, Ryohei | Cell. | 2016 Jun 16; | 27180908 | |
| GABAA circuit mechanisms are associated with ether anesthesia-induced unconsciousness. | Akeju, Oluwaseun; Hamilos, Allison E; Song, Andrew H; Pavone, Kara J; Purdon, Patrick L; Brown, Emery N | Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. | 2016 Jun; | 27178867 | |
| Electroencephalogram signatures of ketamine anesthesia-induced unconsciousness. | Akeju, Oluwaseun; Song, Andrew H; Hamilos, Allison E; Pavone, Kara J; Flores, Francisco J; Brown, Emery N; Purdon, Patrick L | Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. | 2016 Jun; | 27178861 | |
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| The wiring diagram of a glomerular olfactory system. | Berck, Matthew E; Khandelwal, Avinash; Claus, Lindsey; Hernandez-Nunez, Luis; Si, Guangwei; Tabone, Christopher J; Li, Feng; Truman, James W; Fetter, Rick D; Louis, Matthieu; Samuel, Aravinthan Dt; Cardona, Albert | eLife. | 2016 May 13; | 27177418 | |
| Variability in paralimbic dopamine signaling correlates with subjective responses to d-amphetamine. | Smith, Christopher T; Dang, Linh C; Cowan, Ronald L; Kessler, Robert M; Zald, David H | Neuropharmacology. | 2016 Sep; | 27174408 | |
| Arrhythmia risk stratification of patients after myocardial infarction using personalized heart models. | Arevalo, Hermenegild J; Vadakkumpadan, Fijoy; Guallar, Eliseo; Jebb, Alexander; Malamas, Peter; Wu, Katherine C; Trayanova, Natalia A | Nature communications. | 2016 May 10; | 27164184 | |
| Cholinergic Signaling Controls Conditioned Fear Behaviors and Enhances Plasticity of Cortical-Amygdala Circuits. | Jiang, Li; Kundu, Srikanya; Lederman, James D; López-Hernández, Gretchen Y; Ballinger, Elizabeth C; Wang, Shaohua; Talmage, David A; Role, Lorna W | Neuron. | 2016 Jun 1; | 27161525 | |
| The ciliopathy-associated CPLANE proteins direct basal body recruitment of intraflagellar transport machinery. | Toriyama, Michinori; Lee, Chanjae; Taylor, S Paige; Duran, Ivan; Cohn, Daniel H; Bruel, Ange-Line; Tabler, Jacqueline M; Drew, Kevin; Kelly, Marcus R; Kim, Sukyoung; Park, Tae Joo; Braun, Daniela A; Pierquin, Ghislaine; Biver, Armand; Wagner, Kerstin; Mal | Nature genetics. | 2016 Jun; | 27158779 | |
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| Conflicting Selection Pressures Will Constrain Viral Escape from Interfering Particles: Principles for Designing Resistance-Proof Antivirals. | Rast, Luke I; Rouzine, Igor M; Rozhnova, Ganna; Bishop, Lisa; Weinberger, Ariel D; Weinberger, Leor S | PLoS computational biology. | 2016 May; | 27152856 | |
| Benchmarking Spike Rate Inference in Population Calcium Imaging. | Theis, Lucas; Berens, Philipp; Froudarakis, Emmanouil; Reimer, Jacob; Román Rosón, Miroslav; Baden, Tom; Euler, Thomas; Tolias, Andreas S; Bethge, Matthias | Neuron. | 2016 May 4; | 27151639 | |
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| Mycobacterium Cytidylate Kinase Appears to Be an Undruggable Target. | Craig, Justin K; Risler, Jenni K; Loesch, Kimberly A; Dong, Wen; Baker, Dwight; Barrett, Lynn K; Subramanian, Sandhya; Samudrala, Ram; Van Voorhis, Wesley C | Journal of biomolecular screening. | 2016 Aug; | 27146385 | |
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| A scaffold protein connects type IV pili with the Chp chemosensory system to mediate activation of virulence signaling in Pseudomonas aeruginosa. | Inclan, Yuki F; Persat, Alexandre; Greninger, Alexander; Von Dollen, John; Johnson, Jeffery; Krogan, Nevan; Gitai, Zemer; Engel, Joanne N | Molecular microbiology. | 2016 May 3; | 27145134 | |
| Functional connectivity dynamics during film viewing reveal common networks for different emotional experiences. | Raz, Gal; Touroutoglou, Alexandra; Wilson-Mendenhall, Christine; Gilam, Gadi; Lin, Tamar; Gonen, Tal; Jacob, Yael; Atzil, Shir; Admon, Roee; Bleich-Cohen, Maya; Maron-Katz, Adi; Hendler, Talma; Barrett, Lisa Feldman | Cognitive, affective & behavioral neuroscience. | 2016 08; | 27142636 | |
| An extrasynaptic GABAergic signal modulates a pattern of forward movement in Caenorhabditis elegans. | Shen, Yu; Wen, Quan; Liu, He; Zhong, Connie; Qin, Yuqi; Harris, Gareth; Kawano, Taizo; Wu, Min; Xu, Tianqi; Samuel, Aravinthan Dt; Zhang, Yun | eLife. | 2016 05 03; | 27138642 | |
| Wishbone identifies bifurcating developmental trajectories from single-cell data. | Setty, Manu; Tadmor, Michelle D; Reich-Zeliger, Shlomit; Angel, Omer; Salame, Tomer Meir; Kathail, Pooja; Choi, Kristy; Bendall, Sean; Friedman, Nir; Pe'er, Dana | Nature biotechnology. | 2016 Jun; | 27136076 | |
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| Viral genome imaging of hepatitis C virus to probe heterogeneous viral infection and responses to antiviral therapies. | Ramanan, Vyas; Trehan, Kartik; Ong, Mei-Lyn; Luna, Joseph M; Hoffmann, Hans-Heinrich; Espiritu, Christine; Sheahan, Timothy P; Chandrasekar, Hamsika; Schwartz, Robert E; Christine, Kathleen S; Rice, Charles M; van Oudenaarden, Alexander; Bhatia, Sangeeta N | Virology. | 2016 07; | 27128351 | |
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| Poly (lactic acid)-based biomaterials for orthopaedic regenerative engineering. | Narayanan, Ganesh; Vernekar, Varadraj N; Kuyinu, Emmanuel L; Laurencin, Cato T | Advanced drug delivery reviews. | 2016 Apr 25; | 27125191 | |
| Programmable RNA-binding protein composed of repeats of a single modular unit. | Adamala, Katarzyna P; Martin-Alarcon, Daniel A; Boyden, Edward S | Proceedings of the National Academy of Sciences of the United States of America. | 2016 May 10; | 27118836 | |
| Layer-by-layer assembled fluorescent probes in the second near-infrared window for systemic delivery and detection of ovarian cancer. | Dang, Xiangnan; Gu, Li; Qi, Jifa; Correa, Santiago; Zhang, Geran; Belcher, Angela M; Hammond, Paula T | Proceedings of the National Academy of Sciences of the United States of America. | 2016 May 10; | 27114520 | |
| Crystal Structure of Cpf1 in Complex with Guide RNA and Target DNA. | Yamano, Takashi; Nishimasu, Hiroshi; Zetsche, Bernd; Hirano, Hisato; Slaymaker, Ian M; Li, Yinqing; Fedorova, Iana; Nakane, Takanori; Makarova, Kira S; Koonin, Eugene V; Ishitani, Ryuichiro; Zhang, Feng; Nureki, Osamu | Cell. | 2016 May 5; | 27114038 | |
| Feasibility of using patient-specific models and the ''minimum cut'' algorithm to predict optimal ablation targets for left atrial flutter. | Zahid, Sohail; Whyte, Kaitlyn N; Schwarz, Erica L; Blake 3rd, Robert C; Boyle, Patrick M; Chrispin, Jonathan; Prakosa, Adityo; Ipek, Esra G; Pashakhanloo, Farhad; Halperin, Henry R; Calkins, Hugh; Berger, Ronald D; Nazarian, Saman; Trayanova, Natalia A | Heart rhythm. | 2016 08; | 27108938 | |
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| Durable antitumor responses to CD47 blockade require adaptive immune stimulation. | Sockolosky, Jonathan T; Dougan, Michael; Ingram, Jessica R; Ho, Chia Chi M; Kauke, Monique J; Almo, Steven C; Ploegh, Hidde L; Garcia, K Christopher | Proceedings of the National Academy of Sciences of the United States of America. | 2016 May 10; | 27091975 | |
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| How Many Parameters Does It Take to Describe Disease Tolerance? | Louie, Alexander; Song, Kyung Han; Hotson, Alejandra; Thomas Tate, Ann; Schneider, David S | PLoS biology. | 2016 Apr; | 27088212 | |
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| Ketamine's Antidepressant Actions: Potential Mechanisms in the Primate Medial Prefrontal Circuits That Represent Aversive Experience. | Arnsten, Amy F T; Murray, John D; Seo, Hyojung; Lee, Daeyeol | Biological psychiatry. | 2016 May 01; | 27079495 | |
| The Small Molecule Nobiletin Targets the Molecular Oscillator to Enhance Circadian Rhythms and Protect against Metabolic Syndrome. | He, Baokun; Nohara, Kazunari; Park, Noheon; Park, Yong-Sung; Guillory, Bobby; Zhao, Zhaoyang; Garcia, Jose M; Koike, Nobuya; Lee, Cheng Chi; Takahashi, Joseph S; Yoo, Seung-Hee; Chen, Zheng | Cell metabolism. | 2016 Apr 12; | 27076076 | |
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| Sperm is epigenetically programmed to regulate gene transcription in embryos. | Teperek, Marta; Simeone, Angela; Gaggioli, Vincent; Miyamoto, Kei; Allen, George E; Erkek, Serap; Kwon, Taejoon; Marcotte, Edward M; Zegerman, Philip; Bradshaw, Charles R; Peters, Antoine H F M; Gurdon, John B; Jullien, Jerome | Genome research. | 2016 Mar 31; | 27034506 | |
| Defining Molecular Basis for Longevity Traits in Natural Yeast Isolates. | Kaya, Alaattin; Ma, Siming; Wasko, Brian; Lee, Mitchell; Kaeberlein, Matt; Gladyshev, Vadim N | npj aging and mechanisms of disease. | 2015; | 27030810 | |
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| Astrocyte scar formation aids central nervous system axon regeneration. | Anderson, Mark A; Burda, Joshua E; Ren, Yilong; Ao, Yan; O'Shea, Timothy M; Kawaguchi, Riki; Coppola, Giovanni; Khakh, Baljit S; Deming, Timothy J; Sofroniew, Michael V | Nature. | 2016 Apr 14; | 27027288 | |
| Cooperative Subnetworks of Molecularly Similar Interneurons in Mouse Neocortex. | Karnani, Mahesh M; Jackson, Jesse; Ayzenshtat, Inbal; Tucciarone, Jason; Manoocheri, Kasra; Snider, William G; Yuste, Rafael | Neuron. | 2016 Apr 6; | 27021171 | |
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| Dysfunctional Calcium and Glutamate Signaling in Striatal Astrocytes from Huntington's Disease Model Mice. | Jiang, Ruotian; Diaz-Castro, Blanca; Looger, Loren L; Khakh, Baljit S | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Mar 23; | 27013675 | |
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| Phenalenone Polyketide Cyclization Catalyzed by Fungal Polyketide Synthase and Flavin-Dependent Monooxygenase. | Gao, Shu-Shan; Duan, Abing; Xu, Wei; Yu, Peiyuan; Hang, Leibniz; Houk, K N; Tang, Yi | Journal of the American Chemical Society. | 2016 Mar 22; | 26978228 | |
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| P450-Mediated Coupling of Indole Fragments To Forge Communesin and Unnatural Isomers. | Lin, Hsiao-Ching; McMahon, Travis C; Patel, Ashay; Corsello, Michael; Simon, Adam; Xu, Wei; Zhao, Muxun; Houk, K N; Garg, Neil K; Tang, Yi | Journal of the American Chemical Society. | 2016 Mar 18; | 26963294 | |
| VIP+ interneurons control neocortical activity across brain states. | Jackson, Jesse; Ayzenshtat, Inbal; Karnani, Mahesh M; Yuste, Rafael | Journal of neurophysiology. | 2016 Jun 1; | 26961109 | |
| Combinatorial Generation of Chemical Diversity by Redox Enzymes in Chaetoviridin Biosynthesis. | Sato, Michio; Winter, Jaclyn M; Kishimoto, Shinji; Noguchi, Hiroshi; Tang, Yi; Watanabe, Kenji | Organic letters. | 2016 Mar 18; | 26959241 | |
| Biosynthesis of the ?-nitro-containing cyclic tripeptide psychrophilin. | Zhao, Muxun; Lin, Hsiao-Ching; Tang, Yi | The Journal of antibiotics. | 2016 Jul; | 26956794 | |
| The use of (18)F-2-fluorodeoxyglucose (FDG) to label antibody fragments for immuno-PET of pancreatic cancer. | Rashidian, Mohammad; Keliher, Edmund; Dougan, Michael; Juras, Patrick K; Cavallari, Marco; Wojtkiewicz, Gregory R; Jacobsen, Johanne; Edens, Jerre G; Tas, Jeroen M G; Victora, Gabriel; Weissleder, Ralph; Ploegh, Hidde | ACS central science. | 2015 Jun 24; | 26955657 | |
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| Novel Dopamine Therapeutics for Cognitive Deficits in Schizophrenia. | Arnsten, Amy F T; Girgis, Ragy R; Gray, David L; Mailman, Richard B | Biological psychiatry. | 2016 Jan 18; | 26946382 | |
| Neurovascular and Immuno-Imaging: From Mechanisms to Therapies. Proceedings of the Inaugural Symposium. | Akassoglou, Katerina; Agalliu, Dritan; Chang, Christopher J; Davalos, Dimitrios; Grutzendler, Jaime; Hillman, Elizabeth M C; Khakh, Baljit S; Kleinfeld, David; McGavern, Dorian B; Nelson, Sarah J; Zlokovic, Berislav V | Frontiers in neuroscience. | 2016; | 26941593 | |
| Opsin spectral sensitivity determines the effectiveness of optogenetic termination of ventricular fibrillation in the human heart: A simulation study. | Karathanos, Thomas V; Bayer, Jason D; Wang, Dafang; Boyle, Patrick M; Trayanova, Natalia A | The Journal of physiology. | 2016 Mar 4; | 26941055 | |
| Wireless Cortical Brain-Machine Interface for Whole-Body Navigation in Primates. | Rajangam, Sankaranarayani; Tseng, Po-He; Yin, Allen; Lehew, Gary; Schwarz, David; Lebedev, Mikhail A; Nicolelis, Miguel A L | Scientific reports. | 2016; | 26938468 | |
| Assembly and operation of the autopatcher for automated intracellular neural recording in vivo. | Kodandaramaiah, Suhasa B; Holst, Gregory L; Wickersham, Ian R; Singer, Annabelle C; Franzesi, Giovanni Talei; McKinnon, Michael L; Forest, Craig R; Boyden, Edward S | Nature protocols. | 2016 Apr; | 26938115 | |
| UVnovo: A de Novo Sequencing Algorithm Using Single Series of Fragment Ions via Chromophore Tagging and 351 nm Ultraviolet Photodissociation Mass Spectrometry. | Robotham, Scott A; Horton, Andrew P; Cannon, Joe R; Cotham, Victoria C; Marcotte, Edward M; Brodbelt, Jennifer S | Analytical chemistry. | 2016 Apr 5; | 26938041 | |
| Reactivation of Latent HIV-1 Expression by Engineered TALE Transcription Factors. | Perdigão, Pedro; Gaj, Thomas; Santa-Marta, Mariana; Barbas 3rd, Carlos F; Goncalves, Joao | PloS one. | 2016; | 26933881 | |
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| Frequency fluctuations in silicon nanoresonators. | Sansa, Marc; Sage, Eric; Bullard, Elizabeth C; Gély, Marc; Alava, Thomas; Colinet, Eric; Naik, Akshay K; Villanueva, Luis Guillermo; Duraffourg, Laurent; Roukes, Michael L; Jourdan, Guillaume; Hentz, Sébastien | Nature nanotechnology. | 2016 Jun; | 26925826 | |
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| Alzheimer's Disease Risk Polymorphisms Regulate Gene Expression in the ZCWPW1 and the CELF1 Loci. | Karch, Celeste M; Ezerskiy, Lubov A; Bertelsen, Sarah; Alzheimer?s Disease Genetics Consortium (ADGC); Goate, Alison M | PloS one. | 2016; | 26919393 | |
| Human IgG1 antibodies suppress angiogenesis in a target-independent manner. | Bogdanovich, Sasha; Kim, Younghee; Mizutani, Takeshi; Yasuma, Reo; Tudisco, Laura; Cicatiello, Valeria; Bastos-Carvalho, Ana; Kerur, Nagaraj; Hirano, Yoshio; Baffi, Judit Z; Tarallo, Valeria; Li, Shengjian; Yasuma, Tetsuhiro; Arpitha, Parthasarathy; Fowler, Benjamin J; Wright, Charles B; Apicella, Ivana; Greco, Adelaide; Brunetti, Arturo; Ruvo, Menotti; Sandomenico, Annamaria; Nozaki, Miho; Ijima, Ryo; Kaneko, Hiroki; Ogura, Yuichiro; Terasaki, Hiroko; Ambati, Balamurali K; Leusen, Jeanette Hw; Langdon, Wallace Y; Clark, Michael R; Armour, Kathryn L; Bruhns, Pierre; Verbeek, J Sjef; Gelfand, Bradley D; De Falco, Sandro; Ambati, Jayakrishna | Signal transduction and targeted therapy. | 2016; | 26918197 | |
| Association of Left Atrial Local Conduction Velocity With Late Gadolinium Enhancement on Cardiac Magnetic Resonance in Patients With Atrial Fibrillation. | Fukumoto, Kotaro; Habibi, Mohammadali; Ipek, Esra Gucuk; Zahid, Sohail; Khurram, Irfan M; Zimmerman, Stefan L; Zipunnikov, Vadim; Spragg, David; Ashikaga, Hiroshi; Trayanova, Natalia; Tomaselli, Gordon F; Rickard, John; Marine, Joseph E; Berger, Ronald D; | Circulation. Arrhythmia and electrophysiology. | 2016 Mar; | 26917814 | |
| Hypoxia as a therapy for mitochondrial disease. | Jain, Isha H; Zazzeron, Luca; Goli, Rahul; Alexa, Kristen; Schatzman-Bone, Stephanie; Dhillon, Harveen; Goldberger, Olga; Peng, Jun; Shalem, Ophir; Sanjana, Neville E; Zhang, Feng; Goessling, Wolfram; Zapol, Warren M; Mootha, Vamsi K | Science (New York, N.Y.). | 2016 Apr 1; | 26917594 | |
| Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes. | Solomon, Kevin V; Haitjema, Charles H; Henske, John K; Gilmore, Sean P; Borges-Rivera, Diego; Lipzen, Anna; Brewer, Heather M; Purvine, Samuel O; Wright, Aaron T; Theodorou, Michael K; Grigoriev, Igor V; Regev, Aviv; Thompson, Dawn A; O'Malley, Michelle A | Science (New York, N.Y.). | 2016 Mar 11; | 26912365 | |
| Embedding a Panoramic Representation of Infrared Light in the Adult Rat Somatosensory Cortex through a Sensory Neuroprosthesis. | Hartmann, Konstantin; Thomson, Eric E; Zea, Ivan; Yun, Richy; Mullen, Peter; Canarick, Jay; Huh, Albert; Nicolelis, Miguel A L | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Feb 24; | 26911689 | |
| Temporal modulation of collective cell behavior controls vascular network topology. | Kur, Esther; Kim, Jiha; Tata, Aleksandra; Comin, Cesar H; Harrington, Kyle I; Costa, Luciano da F; Bentley, Katie; Gu, Chenghua | eLife. | 2016 Feb 24; | 26910011 | |
| moco: Fast Motion Correction for Calcium Imaging. | Dubbs, Alexander; Guevara, James; Yuste, Rafael | Frontiers in neuroinformatics. | 2016; | 26909035 | |
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| Contrasting responses within a single neuron class enable sex-specific attraction in Caenorhabditis elegans. | Narayan, Anusha; Venkatachalam, Vivek; Durak, Omer; Reilly, Douglas K; Bose, Neelanjan; Schroeder, Frank C; Samuel, Aravinthan D T; Srinivasan, Jagan; Sternberg, Paul W | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Mar 08; | 26903633 | |
| Shooting for the Moon: Nanoscale Approaches to Cancer. | Hammond, Paula T | ACS nano. | 2016 Feb 23; | 26902596 | |
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| Intermittent drivers anchoring to structural heterogeneities as a major pathophysiological mechanism of human persistent atrial fibrillation. | Haissaguerre, Michel; Shah, Ashok J; Cochet, Hubert; Hocini, Meleze; Dubois, Remi; Efimov, Igor; Vigmond, Edward; Bernus, Olivier; Trayanova, Natalia | The Journal of physiology. | 2016 May 1; | 26890861 | |
| Membrane Potential Dynamics of CA1 Pyramidal Neurons during Hippocampal Ripples in Awake Mice. | Hulse, Brad K; Moreaux, Laurent C; Lubenov, Evgueniy V; Siapas, Athanassios G | Neuron. | 2016 Feb 17; | 800-13 | 26889811 |
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| Photoacoustic microscopy of arteriovenous shunts and blood diffusion in early-stage tumors. | Yeh, Chenghung; Liang, Jinyang; Zhou, Yong; Hu, Song; Sohn, Rebecca E; Arbeit, Jeffrey M; Wang, Lihong V | Journal of biomedical optics. | 2016 Feb; | 26882446 | |
| Discovery of 2-Indole-acylsulfonamide Myeloid Cell Leukemia 1 (Mcl-1) Inhibitors Using Fragment-Based Methods. | Pelz, Nicholas F; Bian, Zhiguo; Zhao, Bin; Shaw, Subrata; Tarr, James C; Belmar, Johannes; Gregg, Claire; Camper, DeMarco V; Goodwin, Craig M; Arnold, Allison L; Sensintaffar, John L; Friberg, Anders; Rossanese, Olivia W; Lee, Taekyu; Olejniczak, Edward T; Fesik, Stephen W | Journal of medicinal chemistry. | 2016 Mar 10; | 26878343 | |
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| Regenerative Medicine: Potential Mechanisms of Cardiac Recovery in Takotsubo Cardiomyopathy. | Chang, Andrew Y; Kittle, Jessie T; Wu, Sean M | Current treatment options in cardiovascular medicine. | 2016 Mar; | 26874708 | |
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| Design of a mobile, homogeneous, and efficient electromagnet with a large field of view for neonatal low-field MRI. | Lother, Steffen; Schiff, Steven J; Neuberger, Thomas; Jakob, Peter M; Fidler, Florian | Magma (New York, N.Y.). | 2016 Aug; | 26861046 | |
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| Structurally Defined ?MHC-II Nanobody-Drug Conjugates: A Therapeutic and Imaging System for B-Cell Lymphoma. | Fang, Tao; Duarte, Joao N; Ling, Jingjing; Li, Zeyang; Guzman, Jonathan S; Ploegh, Hidde L | Angewandte Chemie (International ed. in English). | 2016 Feb 12; | 26840214 | |
| Animal models of osteoarthritis: classification, update, and measurement of outcomes. | Kuyinu, Emmanuel L; Narayanan, Ganesh; Nair, Lakshmi S; Laurencin, Cato T | Journal of orthopaedic surgery and research. | 2016; | 26837951 | |
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| Genes with monoallelic expression contribute disproportionately to genetic diversity in humans. | Savova, Virginia; Chun, Sung; Sohail, Mashaal; McCole, Ruth B; Witwicki, Robert; Gai, Lisa; Lenz, Tobias L; Wu, C-ting; Sunyaev, Shamil R; Gimelbrant, Alexander A | Nature genetics. | 2016 Mar; | 26808112 | |
| Neural Circuits Underlying Visually Evoked Escapes in Larval Zebrafish. | Dunn, Timothy W; Gebhardt, Christoph; Naumann, Eva A; Riegler, Clemens; Ahrens, Misha B; Engert, Florian; Del Bene, Filippo | Neuron. | 2016 Feb 3; | 613-28 | 26804997 |
| Production of New Cladosporin Analogues by Reconstitution of the Polyketide Synthases Responsible for the Biosynthesis of this Antimalarial Agent. | Cochrane, Rachel V K; Sanichar, Randy; Lambkin, Gareth R; Reiz, Béla; Xu, Wei; Tang, Yi; Vederas, John C | Angewandte Chemie (International ed. in English). | 2016 Jan 11; | 26783060 | |
| Piwi maintains germline stem cells and oogenesis in Drosophila through negative regulation of Polycomb group proteins. | Peng, Jamy C; Valouev, Anton; Liu, Na; Lin, Haifan | Nature genetics. | 2016 Mar; | 26780607 | |
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| Simultaneous Multi-plane Imaging of Neural Circuits. | Yang, Weijian; Miller, Jae-Eun Kang; Carrillo-Reid, Luis; Pnevmatikakis, Eftychios; Paninski, Liam; Yuste, Rafael; Peterka, Darcy S | Neuron. | 2016 Jan 20; | 269-84 | 26774159 |
| Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin. | Snyder, Matthew W; Kircher, Martin; Hill, Andrew J; Daza, Riza M; Shendure, Jay | Cell. | 2016 Jan 14; | 57-68 | 26771485 |
| Super-resolution imaging reveals distinct chromatin folding for different epigenetic states. | Boettiger, Alistair N; Bintu, Bogdan; Moffitt, Jeffrey R; Wang, Siyuan; Beliveau, Brian J; Fudenberg, Geoffrey; Imakaev, Maxim; Mirny, Leonid A; Wu, Chao-ting; Zhuang, Xiaowei | Nature. | 2016 Jan 21; | 26760202 | |
| Computational discovery of pathway-level genetic vulnerabilities in non-small-cell lung cancer. | Young, Jonathan H; Peyton, Michael; Seok Kim, Hyun; McMillan, Elizabeth; Minna, John D; White, Michael A; Marcotte, Edward M | Bioinformatics (Oxford, England). | 2016 May 1; | 26755624 | |
| Identification and Optimization of Anthranilic Acid Based Inhibitors of Replication Protein?A. | Patrone, James D; Pelz, Nicholas F; Bates, Brittney S; Souza-Fagundes, Elaine M; Vangamudi, Bhavatarini; Camper, Demarco V; Kuznetsov, Alexey G; Browning, Carrie F; Feldkamp, Michael D; Frank, Andreas O; Gilston, Benjamin A; Olejniczak, Edward T; Rossanese, Olivia W; Waterson, Alex G; Chazin, Walter J; Fesik, Stephen W | ChemMedChem. | 2016 Jan 8; | 26748787 | |
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| Myocardial Infarct Segmentation From Magnetic Resonance Images for Personalized Modeling of Cardiac Electrophysiology. | Ukwatta, Eranga; Arevalo, Hermenegild; Li, Kristina; Yuan, Jing; Qiu, Wu; Malamas, Peter; Wu, Katherine C; Trayanova, Natalia A; Vadakkumpadan, Fijoy | IEEE transactions on medical imaging. | 2016 Jun; | 26731693 | |
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| Poly(glycoamidoamine) Brushes Formulated Nanomaterials for Systemic siRNA and mRNA Delivery in Vivo. | Dong, Yizhou; Dorkin, J Robert; Wang, Weiheng; Chang, Philip H; Webber, Matthew J; Tang, Benjamin C; Yang, Junghoon; Abutbul-Ionita, Inbal; Danino, Dganit; DeRosa, Frank; Heartlein, Michael; Langer, Robert; Anderson, Daniel G | Nano letters. | 2016 Feb 10; | 26727632 | |
| Rate-dependent force, intracellular calcium, and action potential voltage alternans are modulated by sarcomere length and heart failure induced-remodeling of thin filament regulation in human heart failure: A myocyte modeling study. | Zile, Melanie A; Trayanova, Natalia A | Progress in biophysics and molecular biology. | 2015 Dec 25; | 26724571 | |
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| Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals. | Sharma, Upasna; Conine, Colin C; Shea, Jeremy M; Boskovic, Ana; Derr, Alan G; Bing, Xin Y; Belleannee, Clemence; Kucukural, Alper; Serra, Ryan W; Sun, Fengyun; Song, Lina; Carone, Benjamin R; Ricci, Emiliano P; Li, Xin Z; Fauquier, Lucas; Moore, Melissa J | Science (New York, N.Y.). | 2016 Jan 22; | 26721685 | |
| In vivo genome editing improves muscle function in a mouse model of Duchenne muscular dystrophy. | Nelson, Christopher E; Hakim, Chady H; Ousterout, David G; Thakore, Pratiksha I; Moreb, Eirik A; Castellanos Rivera, Ruth M; Madhavan, Sarina; Pan, Xiufang; Ran, F Ann; Yan, Winston X; Asokan, Aravind; Zhang, Feng; Duan, Dongsheng; Gersbach, Charles A | Science (New York, N.Y.). | 2016 Jan 22; | 403-7 | 26721684 |
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| High Throughput Layer-by-Layer Films for Extracting Film Forming Parameters and Modulating Film Interactions with Cells. | Jaklenec, Ana; Anselmo, Aaron C; Hong, Jinkee; Vegas, Arturo J; Kozminsky, Molly; Langer, Robert; Hammond, Paula T; Anderson, Daniel G | ACS applied materials & interfaces. | 2016 Jan 27; | 26713554 | |
| Methionine Mistranslation Bypasses the Restraint of the Genetic Code to Generate Mutant Proteins with Distinct Activities. | Wang, Xiaoyun; Pan, Tao | PLoS genetics. | 2015 Dec; | 26709516 | |
| Periodic-shRNA molecules are capable of gene silencing, cytotoxicity and innate immune activation in cancer cells. | Shopsowitz, Kevin E; Wu, Connie; Liu, Gina; Dreaden, Erik C; Hammond, Paula T | Nucleic acids research. | 2016 Jan 29; | 26704983 | |
| Genetic and Epigenetic Variation, but Not Diet, Shape the Sperm Methylome. | Shea, Jeremy M; Serra, Ryan W; Carone, Benjamin R; Shulha, Hennady P; Kucukural, Alper; Ziller, Michael J; Vallaster, Markus P; Gu, Hongcang; Tapper, Andrew R; Gardner, Paul D; Meissner, Alexander; Garber, Manuel; Rando, Oliver J | Developmental cell. | 2015 Dec 21; | 26702833 | |
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| Close-Packed Silicon Microelectrodes for Scalable Spatially Oversampled Neural Recording. | Scholvin, Jorg; Kinney, Justin P; Bernstein, Jacob G; Moore-Kochlacs, Caroline; Kopell, Nancy; Fonstad, Clifton G; Boyden, Edward S | IEEE transactions on bio-medical engineering. | 2016 Jan; | 120-30 | 26699649 |
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| Mice with Shank3 Mutations Associated with ASD and Schizophrenia Display Both Shared and Distinct Defects. | Zhou, Yang; Kaiser, Tobias; Monteiro, Patrícia; Zhang, Xiangyu; Van der Goes, Marie S; Wang, Dongqing; Barak, Boaz; Zeng, Menglong; Li, Chenchen; Lu, Congyi; Wells, Michael; Amaya, Aldo; Nguyen, Shannon; Lewis, Michael; Sanjana, Neville; Zhou, Yongdi; Zha | Neuron. | 2016 Jan 6; | 26687841 | |
| Cell-Specific Transcriptional Profiling of Ciliated Sensory Neurons Reveals Regulators of Behavior and Extracellular Vesicle Biogenesis. | Wang, Juan; Kaletsky, Rachel; Silva, Malan; Williams, April; Haas, Leonard A; Androwski, Rebecca J; Landis, Jessica N; Patrick, Cory; Rashid, Alina; Santiago-Martinez, Dianaliz; Gravato-Nobre, Maria; Hodgkin, Jonathan; Hall, David H; Murphy, Coleen T; Barr, Maureen M | Current biology : CB. | 2015 Dec 21; | 26687621 | |
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| Understanding Programming of Fungal Iterative Polyketide Synthases: The Biochemical Basis for Regioselectivity by the Methyltransferase Domain in the Lovastatin Megasynthase. | Cacho, Ralph A; Thuss, Justin; Xu, Wei; Sanichar, Randy; Gao, Zhizeng; Nguyen, Allison; Vederas, John C; Tang, Yi | Journal of the American Chemical Society. | 2015 Dec 23; | 26630357 | |
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| Graphene Oxide Nanosheets Modified with Single-Domain Antibodies for Rapid and Efficient Capture of Cells. | Chen, Guan-Yu; Li, Zeyang; Theile, Christopher S; Bardhan, Neelkanth M; Kumar, Priyank V; Duarte, Joao N; Maruyama, Takeshi; Rashidfarrokh, Ali; Belcher, Angela M; Ploegh, Hidde L | Chemistry (Weinheim an der Bergstrasse, Germany). | 2015 Nov 23; | 26472062 | |
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| Maternal Ube3a Loss Disrupts Sleep Homeostasis But Leaves Circadian Rhythmicity Largely Intact. | Ehlen, J Christopher; Jones, Kelly A; Pinckney, Lennisha; Gray, Cloe L; Burette, Susan; Weinberg, Richard J; Evans, Jennifer A; Brager, Allison J; Zylka, Mark J; Paul, Ketema N; Philpot, Benjamin D; DeBruyne, Jason P | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2015 Oct 07; | 26446213 | |
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| A New MRI-Based Model of Heart Function with Coupled Hemodynamics and Application to Normal and Diseased Canine Left Ventricles. | Choi, Young Joon; Constantino, Jason; Vedula, Vijay; Trayanova, Natalia; Mittal, Rajat | Frontiers in bioengineering and biotechnology. | 2015; | 26442254 | |
| Lipid Profiles and Signals for Long Life. | Schroeder, Elizabeth A; Brunet, Anne | Trends in endocrinology and metabolism: TEM. | 2015 Nov; | 589-92 | 26439976 |
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| Cardioprotective Actions of TGF?RI Inhibition Through Stimulating Autocrine/Paracrine of Survivin and Inhibiting Wnt in Cardiac Progenitors. | Ho, Yu-Sian; Tsai, Wan-Hsuan; Lin, Fen-Chiung; Huang, Wei-Pang; Lin, Lung-Chun; Wu, Sean M; Liu, Yu-Ru; Chen, Wen-Pin | Stem cells (Dayton, Ohio). | 2015 Sep 29; | 26418219 | |
| Continuous Antigenic Stimulation of DO11.10 TCR Transgenic Mice in the Presence or Absence of IL-1?: Possible Implications for Mechanisms of T Cell Depletion in HIV Disease. | Ladell, Kristin; Hazenberg, Mette D; Fitch, Mark; Emson, Claire; McEvoy-Hein Asgarian, Bridget K; Mold, Jeff E; Miller, Corey; Busch, Robert; Price, David A; Hellerstein, Marc K; McCune, Joseph M | Journal of immunology (Baltimore, Md. : 1950). | 2015 Nov 1; | 4096-105 | 26416271 |
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| Efficient Biosynthesis of Fungal Polyketides Containing the Dioxabicyclo-octane Ring System. | Mao, Xu-Ming; Zhan, Zha-Jun; Grayson, Matthew N; Tang, Man-Cheng; Xu, Wei; Li, Yong-Quan; Yin, Wen-Bing; Lin, Hsiao-Ching; Chooi, Yit-Heng; Houk, K N; Tang, Yi | Journal of the American Chemical Society. | 2015 Sep 23; | 11904-7 | 26340065 |
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| Image-based reconstruction of three-dimensional myocardial infarct geometry for patient-specific modeling of cardiac electrophysiology. | Ukwatta, Eranga; Arevalo, Hermenegild; Rajchl, Martin; White, James; Pashakhanloo, Farhad; Prakosa, Adityo; Herzka, Daniel A; McVeigh, Elliot; Lardo, Albert C; Trayanova, Natalia A; Vadakkumpadan, Fijoy | Medical physics. | 2015 Aug; | 26233186 | |
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| Chemoenzymatic syntheses of water-soluble lipid I fluorescent probes. | Mitachi, Katsuhiko; Siricilla, Shajila; Klaic, Lada; Clemons Jr, William M; Kurosu, Michio | Tetrahedron letters. | 2015 Jun 3; | 3441-3446 | 26190869 |
| A Genome-wide CRISPR Screen in Primary Immune Cells to Dissect Regulatory Networks. | Parnas, Oren; Jovanovic, Marko; Eisenhaure, Thomas M; Herbst, Rebecca H; Dixit, Atray; Ye, Chun Jimmie; Przybylski, Dariusz; Platt, Randall J; Tirosh, Itay; Sanjana, Neville E; Shalem, Ophir; Satija, Rahul; Raychowdhury, Raktima; Mertins, Philipp; Carr, Steven A; Zhang, Feng; Hacohen, Nir; Regev, Aviv | Cell. | 2015 Jul 30; | 675-86 | 26189680 |
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| Biochemical and Structural Basis for Controlling Chemical Modularity in Fungal Polyketide Biosynthesis. | Winter, Jaclyn M; Cascio, Duilio; Dietrich, David; Sato, Michio; Watanabe, Kenji; Sawaya, Michael R; Vederas, John C; Tang, Yi | Journal of the American Chemical Society. | 2015 Aug 12; | 9885-93 | 26172141 |
| Focal Points, Endogenous Processes, and Exogenous Shocks in the Autism Epidemic. | Liu, Kayuet; Bearman, Peter S | Sociological methods & research. | 2015 May 1; | 272-305 | 26166907 |
| De novo production of the key branch point benzylisoquinoline alkaloid reticuline in yeast. | Trenchard, Isis J; Siddiqui, Michael S; Thodey, Kate; Smolke, Christina D | Metabolic engineering. | 2015 Jul 10; | 74-83 | 26166409 |
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| Computing Arm Movements with a Monkey Brainet. | Ramakrishnan, Arjun; Ifft, Peter J; Pais-Vieira, Miguel; Byun, Yoon Woo; Zhuang, Katie Z; Lebedev, Mikhail A; Nicolelis, Miguel A L | Scientific reports. | 2015; | 10767 | 26158523 |
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| The evolving capabilities of rhodopsin-based genetically encoded voltage indicators. | Gong, Yiyang | Current opinion in chemical biology. | 2015 Aug; | 84-9 | 26143170 |
| Piwi Is a Key Regulator of Both Somatic and Germline Stem Cells in the Drosophila Testis. | Gonzalez, Jacob; Qi, Hongying; Liu, Na; Lin, Haifan | Cell reports. | 2015 Jul 7; | 150-61 | 26119740 |
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| Control of cerebrovascular patterning by neural activity during postnatal development. | Lacoste, Baptiste; Gu, Chenghua | Mechanisms of development. | 2015 Nov; | 43-9 | 26116138 |
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| A high-throughput assay for quantifying appetite and digestive dynamics. | Jordi, Josua; Guggiana-Nilo, Drago; Soucy, Edward; Song, Erin Yue; Lei Wee, Caroline; Engert, Florian | American journal of physiology. Regulatory, integrative and comparative physiology. | 2015 Aug 15; | 26108871 | |
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| Dopamine's Actions in Primate Prefrontal Cortex: Challenges for Treating Cognitive Disorders. | Arnsten, Amy F T; Wang, Min; Paspalas, Constantinos D | Pharmacological reviews. | 2015 Jul; | 681-96 | 26106146 |
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| Antibiotic efficacy is linked to bacterial cellular respiration. | Lobritz, Michael A; Belenky, Peter; Porter, Caroline B M; Gutierrez, Arnaud; Yang, Jason H; Schwarz, Eric G; Dwyer, Daniel J; Khalil, Ahmad S; Collins, James J | Proceedings of the National Academy of Sciences of the United States of America. | 2015 Jul 7; | 8173-80 | 26100898 |
| A cationic cysteine-hydrazide as an enrichment tool for the mass spectrometric characterization of bacterial free oligosaccharides. | Jang, Kyoung-Soon; Nani, Roger R; Kalli, Anastasia; Levin, Sergiy; Müller, Axel; Hess, Sonja; Reisman, Sarah E; Clemons Jr, William M | Analytical and bioanalytical chemistry. | 2015 Aug; | 6181-90 | 26100547 |
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| Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis. | Levine, Jacob H; Simonds, Erin F; Bendall, Sean C; Davis, Kara L; Amir, El-ad D; Tadmor, Michelle D; Litvin, Oren; Fienberg, Harris G; Jager, Astraea; Zunder, Eli R; Finck, Rachel; Gedman, Amanda L; Radtke, Ina; Downing, James R; Pe'er, Dana; Nolan, Garry | Cell. | 2015 Jul 2; | 184-97 | 26095251 |
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| Iron Toxicity in the Retina Requires Alu RNA and the NLRP3 Inflammasome. | Gelfand, Bradley D; Wright, Charles B; Kim, Younghee; Yasuma, Tetsuhiro; Yasuma, Reo; Li, Shengjian; Fowler, Benjamin J; Bastos-Carvalho, Ana; Kerur, Nagaraj; Uittenbogaard, Annette; Han, Youn Seon; Lou, Dingyuan; Kleinman, Mark E; McDonald, W Hayes; Núñez, Gabriel; Georgel, Philippe; Dunaief, Joshua L; Ambati, Jayakrishna | Cell reports. | 2015 Jun 23; | 1686-93 | 26074074 |
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| Endogenous sequential cortical activity evoked by visual stimuli. | Carrillo-Reid, Luis; Miller, Jae-Eun Kang; Hamm, Jordan P; Jackson, Jesse; Yuste, Rafael | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2015 Jun 10; | 26063915 | |
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| Combined in vitro transcription and reverse transcription to amplify and label complex synthetic oligonucleotide probe libraries. | Murgha, Yusuf; Beliveau, Brian; Semrau, Kassandra; Schwartz, Donald; Wu, Chao-Ting; Gulari, Erdogan; Rouillard, Jean-Marie | BioTechniques. | 2015 Jun; | 26054766 | |
| Syringe-injectable electronics. | Liu, Jia; Fu, Tian-Ming; Cheng, Zengguang; Hong, Guosong; Zhou, Tao; Jin, Lihua; Duvvuri, Madhavi; Jiang, Zhe; Kruskal, Peter; Xie, Chong; Suo, Zhigang; Fang, Ying; Lieber, Charles M | Nature nanotechnology. | 2015 Jul; | 629-36 | 26053995 |
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| CRISPR/Cas9 cleavage of viral DNA efficiently suppresses hepatitis B virus. | Ramanan, Vyas; Shlomai, Amir; Cox, David B T; Schwartz, Robert E; Michailidis, Eleftherios; Bhatta, Ankit; Scott, David A; Zhang, Feng; Rice, Charles M; Bhatia, Sangeeta N | Scientific reports. | 2015; | 10833 | 26035283 |
| Robust control of burst suppression for medical coma. | Westover, M Brandon; Kim, Seong-Eun; Ching, ShiNung; Purdon, Patrick L; Brown, Emery N | Journal of neural engineering. | 2015 Aug; | 46004 | 26020243 |
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| Computational modeling of cardiac optogenetics: Methodology overview & review of findings from simulations. | Boyle, Patrick M; Karathanos, Thomas V; Entcheva, Emilia; Trayanova, Natalia A | Computers in biology and medicine. | 2015 Oct 1; | 200-8 | 26002074 |
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| Does Autism Diagnosis Age or Symptom Severity Differ Among Children According to Whether Assisted Reproductive Technology was Used to Achieve Pregnancy? | Schieve, Laura A; Fountain, Christine; Boulet, Sheree L; Yeargin-Allsopp, Marshalyn; Kissin, Dmitry M; Jamieson, Denise J; Rice, Catherine; Bearman, Peter | Journal of autism and developmental disorders. | 2015 Sep; | 2991-3003 | 25997596 |
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| Fetal Mammalian Heart Generates a Robust Compensatory Response to Cell Loss. | Sturzu, Anthony C; Rajarajan, Kuppusamy; Passer, Derek; Plonowska, Karolina; Riley, Alyssa; Tan, Timothy C; Sharma, Arun; Xu, Adele F; Engels, Marc C; Feistritzer, Rebecca; Li, Guang; Selig, Martin K; Geissler, Richard; Robertson, Keston D; Scherrer-Crosb | Circulation. | 2015 Jul 14; | 109-21 | 25995316 |
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| Detection of minimal residual disease in B lymphoblastic leukemia using viSNE. | DiGiuseppe, Joseph A; Tadmor, Michelle D; Pe'er, Dana | Cytometry. Part B, Clinical cytometry. | 2015 Sep-Oct; | 294-304 | 25974871 |
| Single molecules meet genomics: pinpointing precision medicine. | Xie, Xiaoliang Sunney | JAMA. | 2015 May 26; | 2021-2 | 25974149 |
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| Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes. | Beliveau, Brian J; Boettiger, Alistair N; Avendaño, Maier S; Jungmann, Ralf; McCole, Ruth B; Joyce, Eric F; Kim-Kiselak, Caroline; Bantignies, Frédéric; Fonseka, Chamith Y; Erceg, Jelena; Hannan, Mohammed A; Hoang, Hien G; Colognori, David; Lee, Jeannie T; Shih, William M; Yin, Peng; Zhuang, Xiaowei; Wu, Chao-ting | Nature communications. | 2015; | 7147 | 25962338 |
| A convergent and essential interneuron pathway for Mauthner-cell-mediated escapes. | Lacoste, Alix M B; Schoppik, David; Robson, Drew N; Haesemeyer, Martin; Portugues, Ruben; Li, Jennifer M; Randlett, Owen; Wee, Caroline L; Engert, Florian; Schier, Alexander F | Current biology : CB. | 2015 Jun 01; | 25959971 | |
| Cells change their sensitivity to an EGF morphogen gradient to control EGF-induced gene expression. | van Zon, Jeroen Sebastiaan; Kienle, Simone; Huelsz-Prince, Guizela; Barkoulas, Michalis; van Oudenaarden, Alexander | Nature communications. | 2015; | 7053 | 25958991 |
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| Brains, genes, and primates. | Izpisua Belmonte, Juan Carlos; Callaway, Edward M; Caddick, Sarah J; Churchland, Patricia; Feng, Guoping; Homanics, Gregg E; Lee, Kuo-Fen; Leopold, David A; Miller, Cory T; Mitchell, Jude F; Mitalipov, Shoukhrat; Moutri, Alysson R; Movshon, J Anthony; Okano, Hideyuki; Reynolds, John H; Ringach, Dario; Sejnowski, Terrence J; Silva, Afonso C; Strick, Peter L; Wu, Jun; Zhang, Feng | Neuron. | 2015 May 6; | 617-31 | 25950631 |
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| Quantifying Pituitary-Adrenal Dynamics and Deconvolution of Concurrent Cortisol and Adrenocorticotropic Hormone Data by Compressed Sensing. | Faghih, Rose; Dahleh, Munther; Adler, Gail; Klerman, Elizabeth; Brown, Emery | IEEE transactions on bio-medical engineering. | 2015 Apr 29; | 25935025 | |
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| Drosophila dicer-2 cleavage is mediated by helicase- and dsRNA termini-dependent states that are modulated by Loquacious-PD. | Sinha, Niladri K; Trettin, Kyle D; Aruscavage, P Joseph; Bass, Brenda L | Molecular cell. | 2015 May 7; | 406-17 | 25891075 |
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| Powerful anti-tumor and anti-angiogenic activity of a new anti-vascular endothelial growth factor receptor 1 peptide in colorectal cancer models. | Cicatiello, Valeria; Apicella, Ivana; Tudisco, Laura; Tarallo, Valeria; Formisano, Luigi; Sandomenico, Annamaria; Kim, Younghee; Bastos-Carvalho, Ana; Orlandi, Augusto; Ambati, Jayakrishna; Ruvo, Menotti; Bianco, Roberto; De Falco, Sandro | Oncotarget. | 2015 Apr 30; | 10563-76 | 25868854 |
| Derivation of highly purified cardiomyocytes from human induced pluripotent stem cells using small molecule-modulated differentiation and subsequent glucose starvation. | Sharma, Arun; Li, Guang; Rajarajan, Kuppusamy; Hamaguchi, Ryoko; Burridge, Paul W; Wu, Sean M | Journal of visualized experiments : JoVE. | 2015 Mar 18; | 25867738 | |
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| Discovery of tricyclic indoles that potently inhibit Mcl-1 using fragment-based methods and structure-based design. | Burke, Jason P; Bian, Zhiguo; Shaw, Subrata; Zhao, Bin; Goodwin, Craig M; Belmar, Johannes; Browning, Carrie F; Vigil, Dominico; Friberg, Anders; Camper, DeMarco V; Rossanese, Olivia W; Lee, Taekyu; Olejniczak, Edward T; Fesik, Stephen W | Journal of medicinal chemistry. | 2015 May 14; | 3794-805 | 25844895 |
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| In vivo genome editing using Staphylococcus aureus Cas9. | Ran, F Ann; Cong, Le; Yan, Winston X; Scott, David A; Gootenberg, Jonathan S; Kriz, Andrea J; Zetsche, Bernd; Shalem, Ophir; Wu, Xuebing; Makarova, Kira S; Koonin, Eugene V; Sharp, Phillip A; Zhang, Feng | Nature. | 2015 Apr 9; | 186-91 | 25830891 |
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| High-speed label-free functional photoacoustic microscopy of mouse brain in action. | Yao, Junjie; Wang, Lidai; Yang, Joon-Mo; Maslov, Konstantin I; Wong, Terence T W; Li, Lei; Huang, Chih-Hsien; Zou, Jun; Wang, Lihong V | Nature methods. | 2015 May; | 407-10 | 25822799 |
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| Reassessment of Piwi binding to the genome and Piwi impact on RNA polymerase II distribution. | Lin, Haifan; Chen, Mengjie; Kundaje, Anshul; Valouev, Anton; Yin, Hang; Liu, Na; Neuenkirchen, Nils; Zhong, Mei; Snyder, Michael | Developmental cell. | 2015 Mar 23; | 772-4 | 25805139 |
| Exploiting metabolic and antioxidant pathways to maintain vision in blinding disease. | Ramachandran, Pavitra S; Song, Ji Yun; Bennett, Jean | The Journal of clinical investigation. | 2015 Apr; | 25798615 | |
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| Whole-field visual motion drives swimming in larval zebrafish via a stochastic process. | Portugues, Ruben; Haesemeyer, Martin; Blum, Mirella L; Engert, Florian | The Journal of experimental biology. | 2015 May; | 25792753 | |
| N-Sulfonyl-?-lactam hapten as an effective labeling reagent for aldolase mAb. | Inokuma, Tsubasa; Fuller, Roberta P; Barbas 3rd, Carlos F | Bioorganic & medicinal chemistry letters. | 2015 Apr 15; | 1684-7 | 25791455 |
| Association between assisted reproductive technology conception and autism in California, 1997-2007. | Fountain, Christine; Zhang, Yujia; Kissin, Dmitry M; Schieve, Laura A; Jamieson, Denise J; Rice, Catherine; Bearman, Peter | American journal of public health. | 2015 May; | 963-71 | 25790396 |
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| Optochemical dissection of T-box gene-dependent medial floor plate development. | Payumo, Alexander Y; Walker, Whitney J; McQuade, Lindsey E; Yamazoe, Sayumi; Chen, James K | ACS chemical biology. | 2015 Jun 19; | 1466-75 | 25781211 |
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| Antibody engineering for increased potency, breadth and half-life. | Sievers, Stuart A; Scharf, Louise; West Jr, Anthony P; Bjorkman, Pamela J | Current opinion in HIV and AIDS. | 2015 May; | 151-9 | 25760931 |
| Noninvasive photoacoustic microscopy of methemoglobin in vivo. | Tang, Min; Zhou, Yong; Zhang, Ruiying; Wang, Lihong V | Journal of biomedical optics. | 2015 Mar; | 36007 | 25760655 |
| Prolonged Period of Cortical Plasticity upon Redox Dysregulation in Fast-Spiking Interneurons. | Morishita, Hirofumi; Cabungcal, Jan-Harry; Chen, Ying; Do, Kim Q; Hensch, Takao K | Biological psychiatry. | 2015 Sep 15; | 396-402 | 25758057 |
| Improved cell-penetrating zinc-finger nuclease proteins for precision genome engineering. | Liu, Jia; Gaj, Thomas; Wallen, Mark C; Barbas 3rd, Carlos F | Molecular therapy. Nucleic acids. | 2015 Mar 10; | 25756962 | |
| Visuomotor transformations underlying hunting behavior in zebrafish. | Bianco, Isaac H; Engert, Florian | Current biology : CB. | 2015 Mar 30; | 25754638 | |
| Analog time-reversed ultrasonically encoded light focusing inside scattering media with a 33,000× optical power gain. | Ma, Cheng; Xu, Xiao; Wang, Lihong V | Scientific reports. | 2015 Mar 10; | 25753905 | |
| Genome-wide CRISPR screen in a mouse model of tumor growth and metastasis. | Chen, Sidi; Sanjana, Neville E; Zheng, Kaijie; Shalem, Ophir; Lee, Kyungheon; Shi, Xi; Scott, David A; Song, Jun; Pan, Jen Q; Weissleder, Ralph; Lee, Hakho; Zhang, Feng; Sharp, Phillip A | Cell. | 2015 Mar 12; | 1246-60 | 25748654 |
| Hypothalamic Agrp neurons drive stereotypic behaviors beyond feeding. | Dietrich, Marcelo O; Zimmer, Marcelo R; Bober, Jeremy; Horvath, Tamas L | Cell. | 2015 Mar 12; | 1222-32 | 25748653 |
| Structural biology. Structural basis for chemokine recognition and activation of a viral G protein-coupled receptor. | Burg, John S; Ingram, Jessica R; Venkatakrishnan, A J; Jude, Kevin M; Dukkipati, Abhiram; Feinberg, Evan N; Angelini, Alessandro; Waghray, Deepa; Dror, Ron O; Ploegh, Hidde L; Garcia, K Christopher | Science (New York, N.Y.). | 2015 Mar 6; | 1113-7 | 25745166 |
| High relaxivity Gd(III)-DNA gold nanostars: investigation of shape effects on proton relaxation. | Rotz, Matthew W; Culver, Kayla S B; Parigi, Giacomo; MacRenaris, Keith W; Luchinat, Claudio; Odom, Teri W; Meade, Thomas J | ACS nano. | 2015 Mar 24; | 3385-96 | 25723190 |
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| A theoretical justification for single molecule peptide sequencing. | Swaminathan, Jagannath; Boulgakov, Alexander A; Marcotte, Edward M | PLoS computational biology. | 2015 Feb; | e1004080 | 25714988 |
| The DEAH-box helicase Dhr1 dissociates U3 from the pre-rRNA to promote formation of the central pseudoknot. | Sardana, Richa; Liu, Xin; Granneman, Sander; Zhu, Jieyi; Gill, Michael; Papoulas, Ophelia; Marcotte, Edward M; Tollervey, David; Correll, Carl C; Johnson, Arlen W | PLoS biology. | 2015 Feb; | e1002083 | 25710520 |
| Hypothalamic POMC neurons promote cannabinoid-induced feeding. | Koch, Marco; Varela, Luis; Kim, Jae Geun; Kim, Jung Dae; Hernández-Nuño, Francisco; Simonds, Stephanie E; Castorena, Carlos M; Vianna, Claudia R; Elmquist, Joel K; Morozov, Yury M; Rakic, Pasko; Bechmann, Ingo; Cowley, Michael A; Szigeti-Buck, Klara; Dietrich, Marcelo O; Gao, Xiao-Bing; Diano, Sabrina; Horvath, Tamas L | Nature. | 2015 Mar 5; | 45-50 | 25707796 |
| Threat perception after the Boston Marathon bombings: The effects of personal relevance and conceptual framing. | Wormwood, Jolie Baumann; Lynn, Spencer K; Feldman Barrett, Lisa; Quigley, Karen S | Cognition & emotion. | 2016 Apr; | 539-49 | 25707419 |
| Robust and fragile aspects of cortical blood flow in relation to the underlying angioarchitecture. | Shih, Andy Y; Rühlmann, Charlotta; Blinder, Pablo; Devor, Anna; Drew, Patrick J; Friedman, Beth; Knutsen, Per M; Lyden, Patrick D; Matéo, Céline; Mellander, Lisa; Nishimura, Nozomi; Schaffer, Chris B; Tsai, Philbert S; Kleinfeld, David | Microcirculation (New York, N.Y. : 1994). | 2015 Apr; | 204-18 | 25705966 |
| Corrigendum to ''effects of fibrosis morphology on reentrant ventricular tachycardia inducibility and simulation fidelity in patient-derived models''. | Ringenberg, Jordan; Deo, Makarand; Filgueiras-Rama, David; Pizarro, Gonzalo; Ibañez, Borja; Peinado, Rafael; Trayanova, Natalia; Miller, Michael; Merino, José L; Berenfeld, Omer; Devabhaktuni, Vijay | Clinical Medicine Insights. Cardiology. | 2014; | 51 | 25698881 |
| Tripling the detection view of high-frequency linear-array-based photoacoustic computed tomography by using two planar acoustic reflectors. | Li, Guo; Xia, Jun; Wang, Kun; Maslov, Konstantin; Anastasio, Mark A; Wang, Lihong V | Quantitative imaging in medicine and surgery. | 2015 Feb; | 57-62 | 25694954 |
| Multiscale modelling of relationships between protein classes and drug behavior across all diseases using the CANDO platform. | Sethi, Geetika; Chopra, Gaurav; Samudrala, Ram | Mini reviews in medicinal chemistry. | 2015; | 705-17 | 25694071 |
| Virtual electrophysiological study of atrial fibrillation in fibrotic remodeling. | McDowell, Kathleen S; Zahid, Sohail; Vadakkumpadan, Fijoy; Blauer, Joshua; MacLeod, Rob S; Trayanova, Natalia A | PloS one. | 2015; | e0117110 | 25692857 |
| A platform for rapid exploration of aging and diseases in a naturally short-lived vertebrate. | Harel, Itamar; Benayoun, Bérénice A; Machado, Ben; Singh, Param Priya; Hu, Chi-Kuo; Pech, Matthew F; Valenzano, Dario Riccardo; Zhang, Elisa; Sharp, Sabrina C; Artandi, Steven E; Brunet, Anne | Cell. | 2015 Feb 26; | 1013-26 | 25684364 |
| Intrinsic connectivity in the human brain does not reveal networks for 'basic' emotions. | Touroutoglou, Alexandra; Lindquist, Kristen A; Dickerson, Bradford C; Barrett, Lisa Feldman | Social cognitive and affective neuroscience. | 2015 Feb 12; | 25680990 | |
| Nonlytic spread of naked viruses. | Bird, Sara W; Kirkegaard, Karla | Autophagy. | 2015; | 430-1 | 25680079 |
| HypE-specific nanobodies as tools to modulate HypE-mediated target AMPylation. | Truttmann, Matthias C; Wu, Qin; Stiegeler, Sarah; Duarte, Joao N; Ingram, Jessica; Ploegh, Hidde L | The Journal of biological chemistry. | 2015 Apr 3; | 9087-100 | 25678711 |
| Gene expression defines natural changes in mammalian lifespan. | Fushan, Alexey A; Turanov, Anton A; Lee, Sang-Goo; Kim, Eun Bae; Lobanov, Alexei V; Yim, Sun Hee; Buffenstein, Rochelle; Lee, Sang-Rae; Chang, Kyu-Tae; Rhee, Hwanseok; Kim, Jong-So; Yang, Kap-Seok; Gladyshev, Vadim N | Aging cell. | 2015 Jun; | 352-65 | 25677554 |
| Handheld photoacoustic probe to detect both melanoma depth and volume at high speed in vivo. | Zhou, Yong; Li, Guo; Zhu, Liren; Li, Chiye; Cornelius, Lynn A; Wang, Lihong V | Journal of biophotonics. | 2015 Feb 9; | 25676898 | |
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| General strategy for biodetection in high ionic strength solutions using transistor-based nanoelectronic sensors. | Gao, Ning; Zhou, Wei; Jiang, Xiaocheng; Hong, Guosong; Fu, Tian-Ming; Lieber, Charles M | Nano letters. | 2015 Mar 11; | 2143-8 | 25664395 |
| Unseen Affective Faces Influence Person Perception Judgments in Schizophrenia. | Kring, Ann M; Siegel, Erika H; Barrett, Lisa Feldman | Clinical psychological science : a journal of the Association for Psychological Science. | 2014 Jul; | 25664225 | |
| 16p11.2 Deletion Syndrome Mice Display Sensory and Ultrasonic Vocalization Deficits During Social Interactions. | Yang, Mu; Mahrt, Elena J; Lewis, Freeman; Foley, Gillian; Portmann, Thomas; Dolmetsch, Ricardo E; Portfors, Christine V; Crawley, Jacqueline N | Autism research : official journal of the International Society for Autism Research. | 2015 Feb 7; | 25663600 | |
| Therapeutic genome editing: prospects and challenges. | Cox, David Benjamin Turitz; Platt, Randall Jeffrey; Zhang, Feng | Nature medicine. | 2015 Feb; | 25654603 | |
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| Spatial information in large-scale neural recordings. | Cybulski, Thaddeus R; Glaser, Joshua I; Marblestone, Adam H; Zamft, Bradley M; Boyden, Edward S; Church, George M; Kording, Konrad P | Frontiers in computational neuroscience. | 2014; | 172 | 25653613 |
| The human burst suppression electroencephalogram of deep hypothermia. | Brandon Westover, M; Ching, ShiNung; Kumaraswamy, Vishakhadatta M; Akeju, Oluwaseun; Pierce, Eric; Cash, Sydney S; Kilbride, Ronan; Brown, Emery N; Purdon, Patrick L | Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. | 2015 Oct; | 1901-14 | 25649968 |
| The evolution of drug resistance in clinical isolates of Candida albicans. | Ford, Christopher B; Funt, Jason M; Abbey, Darren; Issi, Luca; Guiducci, Candace; Martinez, Diego A; Delorey, Toni; Li, Bi Yu; White, Theodore C; Cuomo, Christina; Rao, Reeta P; Berman, Judith; Thompson, Dawn A; Regev, Aviv | eLife. | 2015; | e00662 | 25646566 |
| Comparative analysis of genome maintenance genes in naked mole rat, mouse, and human. | MacRae, Sheila L; Zhang, Quanwei; Lemetre, Christophe; Seim, Inge; Calder, Robert B; Hoeijmakers, Jan; Suh, Yousin; Gladyshev, Vadim N; Seluanov, Andrei; Gorbunova, Vera; Vijg, Jan; Zhang, Zhengdong D | Aging cell. | 2015 Apr; | 288-91 | 25645816 |
| Mechanism of automaticity in cardiomyocytes derived from human induced pluripotent stem cells. | Kim, Jong J; Yang, Lei; Lin, Bo; Zhu, Xiaodong; Sun, Bin; Kaplan, Aaron D; Bett, Glenna C L; Rasmusson, Randall L; London, Barry; Salama, Guy | Journal of molecular and cellular cardiology. | 2015 Apr; | 81-93 | 25644533 |
| Computational analysis of the effect of valvular regurgitation on ventricular mechanics using a 3D electromechanics model. | Lim, Ki Moo; Hong, Seung-Bae; Lee, Byong Kwon; Shim, Eun Bo; Trayanova, Natalia | The journal of physiological sciences : JPS. | 2015 Mar; | 25644379 | |
| A split-Cas9 architecture for inducible genome editing and transcription modulation. | Zetsche, Bernd; Volz, Sara E; Zhang, Feng | Nature biotechnology. | 2015 Feb; | 139-42 | 25643054 |
| Next-generation sequencing approach for connecting secondary metabolites to biosynthetic gene clusters in fungi. | Cacho, Ralph A; Tang, Yi; Chooi, Yit-Heng | Frontiers in microbiology. | 2014; | 774 | 25642215 |
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| Sparse feature selection identifies H2A.Z as a novel, pattern-specific biomarker for asymmetrically self-renewing distributed stem cells. | Huh, Yang Hoon; Noh, Minsoo; Burden, Frank R; Chen, Jennifer C; Winkler, David A; Sherley, James L | Stem cell research. | 2015 Mar; | 144-54 | 25636161 |
| Large-scale imaging in small brains. | Ahrens, Misha B; Engert, Florian | Current opinion in neurobiology. | 2015 Jun; | 25636154 | |
| Intra-spike crosslinking overcomes antibody evasion by HIV-1. | Galimidi, Rachel P; Klein, Joshua S; Politzer, Maria S; Bai, Shiyu; Seaman, Michael S; Nussenzweig, Michel C; West Jr, Anthony P; Bjorkman, Pamela J | Cell. | 2015 Jan 29; | 433-46 | 25635457 |
| Small RNAs make big impact in cardiac repair. | Krane, Markus; Deutsch, Marcus-André; Doppler, Stefanie; Lange, Rüdiger; Wu, Sean M | Circulation research. | 2015 Jan 30; | 393-5 | 25634967 |
| Identification of cardiovascular lineage descendants at single-cell resolution. | Li, Guang; Plonowska, Karolina; Kuppusamy, Rajarajan; Sturzu, Anthony; Wu, Sean M | Development (Cambridge, England). | 2015 Mar 1; | 846-57 | 25633351 |
| A novel paradigm for nonassociative long-term memory in Drosophila: predator-induced changes in oviposition behavior. | Kacsoh, Balint Z; Bozler, Julianna; Hodge, Sassan; Ramaswami, Mani; Bosco, Giovanni | Genetics. | 2015 Apr; | 25633088 | |
| The Brain Basis of Positive and Negative Affect: Evidence from a Meta-Analysis of the Human Neuroimaging Literature. | Lindquist, Kristen A; Satpute, Ajay B; Wager, Tor D; Weber, Jochen; Barrett, Lisa Feldman | Cerebral cortex (New York, N.Y. : 1991). | 2015 Jan 28; | 25631056 | |
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| Ameliorating treatment-refractory depression with intranasal ketamine: potential NMDA receptor actions in the pain circuitry representing mental anguish. | Opler, Lewis A; Opler, Mark G A; Arnsten, Amy F T | CNS spectrums. | 2016 Feb; | 22-Dec | 25619798 |
| In vivo deep brain imaging of rats using oral-cavity illuminated photoacoustic computed tomography. | Lin, Li; Xia, Jun; Wong, Terence T W; Li, Lei; Wang, Lihong V | Journal of biomedical optics. | 2015 Jan; | 16019 | 25611865 |
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| Astrocyte calcium signaling: from observations to functions and the challenges therein. | Khakh, Baljit S; McCarthy, Ken D | Cold Spring Harbor perspectives in biology. | 2015 Apr; | a020404 | 25605709 |
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| The evolution of bacterial mechanosensitive channels. | Booth, Ian R; Miller, Samantha; Muller, Axel; Lehtovirta-Morley, Laura | Cell calcium. | 2015 Mar; | 140-50 | 25591932 |
| Optical drug monitoring: photoacoustic imaging of nanosensors to monitor therapeutic lithium in vivo. | Cash, Kevin J; Li, Chiye; Xia, Jun; Wang, Lihong V; Clark, Heather A | ACS nano. | 2015 Feb 24; | 1692-8 | 25588028 |
| Chloride cotransporter NKCC1 inhibitor bumetanide protects against white matter injury in a rodent model of periventricular leukomalacia. | Jantzie, Lauren L; Hu, Melody Y; Park, Hyun-Kyung; Jackson, Michele C; Yu, Jenny; Maxwell, Jessie R; Jensen, Frances E | Pediatric research. | 2015 Apr; | 554-62 | 25585037 |
| Elucidation of the concise biosynthetic pathway of the communesin indole alkaloids. | Lin, Hsiao-Ching; Chiou, Grace; Chooi, Yit-Heng; McMahon, Travis C; Xu, Wei; Garg, Neil K; Tang, Yi | Angewandte Chemie (International ed. in English). | 2015 Mar 2; | 3004-7 | 25571861 |
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| A PKA activity sensor for quantitative analysis of endogenous GPCR signaling via 2-photon FRET-FLIM imaging. | Chen, Yao; Saulnier, Jessica L; Yellen, Gary; Sabatini, Bernardo L | Frontiers in pharmacology | 2014 | 56 | 24765076 |
| Mathematical approaches to understanding and imaging atrial fibrillation: significance for mechanisms and management. | Trayanova, Natalia A | Circulation research. | 2014 Apr 25; | 1516-31 | 24763468 |
| Vasoactive intestinal polypeptide mediates circadian rhythms in mammalian olfactory bulb and olfaction. | Miller, Jae-Eun Kang; Granados-Fuentes, Daniel; Wang, Thomas; Marpegan, Luciano; Holy, Timothy E; Herzog, Erik D | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2014 Apr 23 | 6040-6 | 24760863 |
| Imaging neural spiking in brain tissue using FRET-opsin protein voltage sensors. | Gong, Yiyang; Wagner, Mark J; Zhong Li, Jin; Schnitzer, Mark J | Nature communications | 2014 | 3674 | 24755708 |
| Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells. | Wu, Xuebing; Scott, David A; Kriz, Andrea J; Chiu, Anthony C; Hsu, Patrick D; Dadon, Daniel B; Cheng, Albert W; Trevino, Alexandro E; Konermann, Silvana; Chen, Sidi; Jaenisch, Rudolf; Zhang, Feng; Sharp, Phillip A | Nature biotechnology. | 2014 Jul; | 670-6 | 24752079 |
| Population code in mouse V1 facilitates readout of natural scenes through increased sparseness. | Froudarakis, Emmanouil; Berens, Philipp; Ecker, Alexander S; Cotton, R James; Sinz, Fabian H; Yatsenko, Dimitri; Saggau, Peter; Bethge, Matthias; Tolias, Andreas S | Nature neuroscience | 2014 Jun | 851-7 | 24747577 |
| Small-molecule RORýýt antagonists inhibit T helper 17 cell transcriptional network by divergent mechanisms. | Xiao, Sheng; Yosef, Nir; Yang, Jianfei; Wang, Yonghui; Zhou, Ling; Zhu, Chen; Wu, Chuan; Baloglu, Erkan; Schmidt, Darby; Ramesh, Radha; Lobera, Mercedes; Sundrud, Mark S; Tsai, Pei-Yun; Xiang, Zhijun; Wang, Jinsong; Xu, Yan; Lin, Xichen; Kretschmer, Karst | Immunity | 2014 Apr 17 | 477-89 | 24745332 |
| Synthetic RNA switches for yeast metabolic engineering: screening recombinant enzyme libraries. | Michener, Joshua K; Smolke, Christina D | Methods in molecular biology (Clifton, N.J.). | 2014; | 125-36 | 24744030 |
| Conditions and constraints for astrocyte calcium signaling in the hippocampal mossy fiber pathway. | Haustein, Martin D; Kracun, Sebastian; Lu, Xiao-Hong; Shih, Tiffany; Jackson-Weaver, Olan; Tong, Xiaoping; Xu, Ji; Yang, X William; O'Dell, Thomas J; Marvin, Jonathan S; Ellisman, Mark H; Bushong, Eric A; Looger, Loren L; Khakh, Baljit S | Neuron. | 2014 Apr 16; | 413-29 | 24742463 |
| Representing sex in the brain, one module at a time. | Yang, Cindy F; Shah, Nirao M | Neuron | 2014 Apr 16 | 261-78 | 24742456 |
| Protein-to-mRNA Ratios Are Conserved between Pseudomonas aeruginosa Strains. | Kwon, Taejoon; Huse, Holly K; Vogel, Christine; Whiteley, Marvin; Marcotte, Edward M | Journal of proteome research | 2014 Apr 17 | NULL | 24742327 |
| Navigational strategies underlying phototaxis in larval zebrafish. | Chen, Xiuye; Engert, Florian | Frontiers in systems neuroscience. | 2014; | 24723859 | |
| Calibration-free structured-illumination photoacoustic flowgraphy of transverse flow in scattering media. | Yao, Junjie; Gilson, Rebecca C; Maslov, Konstantin I; Wang, Lidai; Wang, Lihong V | Journal of biomedical optics | 2014 Apr | 46007 | 24718385 |
| Perceptions of emotion from facial expressions are not culturally universal: evidence from a remote culture. | Gendron, Maria; Roberson, Debi; van der Vyver, Jacoba Marietta; Barrett, Lisa Feldman | Emotion (Washington, D.C.) | 2014 Apr | 251-62 | 24708506 |
| cAMP-PKA phosphorylation of tau confers risk for degeneration in aging association cortex. | Carlyle, Becky C; Nairn, Angus C; Wang, Min; Yang, Yang; Jin, Lu E; Simen, Arthur A; Ramos, Brian P; Bordner, Kelly A; Craft, George E; Davies, Peter; Pletikos, Mihovil; ?estan, Nenad; Arnsten, Amy F T; Paspalas, Constantinos D | Proceedings of the National Academy of Sciences of the United States of America. | 2014 Apr 1; | 5036-41 | 24707050 |
| Pathways Disrupted in Human ALS Motor Neurons Identified through Genetic Correction of Mutant SOD1. | Kiskinis, Evangelos; Sandoe, Jackson; Williams, Luis A; Boulting, Gabriella L; Moccia, Rob; Wainger, Brian J; Han, Steve; Peng, Theodore; Thams, Sebastian; Mikkilineni, Shravani; Mellin, Cassidy; Merkle, Florian T; Davis-Dusenbery, Brandi N; Ziller, Micha | Cell stem cell | 2014 Jun 5 | 781-95 | 24704492 |
| Influenza A H1N1 pandemic strain evolution--divergence and the potential for antigenic drift variants. | Klein, Eili Y; Serohijos, Adrian W R; Choi, Jeong-Mo; Shakhnovich, Eugene I; Pekosz, Andrew | PloS one | 2014 | e93632 | 24699432 |
| State dependence of noise correlations in macaque primary visual cortex. | Ecker, Alexander S; Berens, Philipp; Cotton, R James; Subramaniyan, Manivannan; Denfield, George H; Cadwell, Cathryn R; Smirnakis, Stelios M; Bethge, Matthias; Tolias, Andreas S | Neuron | 2014 Apr 2 | 235-48 | 24698278 |
| Chaperones and cardiac misfolding protein diseases. | Christians, Elisabeth S; Mustafi, Soumyajit B; Benjamin, Ivor J | Current protein & peptide science | 2014 May | 189-204 | 24694370 |
| Urogenital photoacoustic endoscope. | Li, Chiye; Yang, Joon-Mo; Chen, Ruimin; Yeh, Cheng-Hung; Zhu, Liren; Maslov, Konstantin; Zhou, Qifa; Kirk Shung, K; Wang, Lihong V | Optics letters | 2014 Mar 15 | 1473-6 | 24690816 |
| Improved in vitro efficacy of gold nanoconstructs by increased loading of G-quadruplex aptamer. | Dam, Duncan Hieu M; Lee, Raymond C; Odom, Teri W | Nano letters | 2014 May 14 | 2843-8 | 24689438 |
| Astrocyte Kir4.1 ion channel deficits contribute to neuronal dysfunction in Huntington's disease model mice. | Tong, Xiaoping; Ao, Yan; Faas, Guido C; Nwaobi, Sinifunanya E; Xu, Ji; Haustein, Martin D; Anderson, Mark A; Mody, Istvan; Olsen, Michelle L; Sofroniew, Michael V; Khakh, Baljit S | Nature neuroscience. | 2014 May; | 694-703 | 24686787 |
| Fully motorized optical-resolution photoacoustic microscopy. | Li, Lei; Yeh, Chenghung; Hu, Song; Wang, Lidai; Soetikno, Brian T; Chen, Ruimin; Zhou, Qifa; Shung, K Kirk; Maslov, Konstantin I; Wang, Lihong V | Optics letters | 2014 Apr 1 | 2117-20 | 24686689 |
| Comparison of the theoretical and real-world evolutionary potential of a genetic circuit. | Razo-Mejia, M; Boedicker, J Q; Jones, D; Deluna, A; Kinney, J B; Phillips, R | Physical biology | 2014 Apr | 26005 | 24685590 |
| Proteomic identification of monoclonal antibodies from serum. | Boutz, Daniel R; Horton, Andrew P; Wine, Yariv; Lavinder, Jason J; Georgiou, George; Marcotte, Edward M | Analytical chemistry | 2014 May 20 | 4758-66 | 24684310 |
| Transcriptional profiling of cells sorted by RNA abundance. | Klemm, Sandy; Semrau, Stefan; Wiebrands, Kay; Mooijman, Dylan; Faddah, Dina A; Jaenisch, Rudolf; van Oudenaarden, Alexander | Nature methods | 2014 May | 549-51 | 24681693 |
| Signaling by IL-6 promotes alternative activation of macrophages to limit endotoxemia and obesity-associated resistance to insulin. | Mauer, Jan; Chaurasia, Bhagirath; Goldau, Julia; Vogt, Merly C; Ruud, Johan; Nguyen, Khoa D; Theurich, Sebastian; Hausen, A Christine; Schmitz, Joel; Bronneke, Hella S; Estevez, Emma; Allen, Tamara L; Mesaros, Andrea; Partridge, Linda; Febbraio, Mark A; C | Nature immunology | 2014 May | 423-30 | 24681566 |
| Minireview: Metabolism of female reproduction: regulatory mechanisms and clinical implications. | Seli, Emre; Babayev, Elnur; Collins, Stephen C; Nemeth, Gabor; Horvath, Tamas L | Molecular endocrinology (Baltimore, Md.) | 2014 Jun | 790-804 | 24678733 |
| Using SV119-Gold Nanocage Conjugates to Eradicate Cancer Stem Cells Through a Combination of Photothermal and Chemo Therapies. | Sun, Tianmeng; Wang, Yi; Wang, Yucai; Xu, Jinbin; Zhao, Xin; Vangveravong, Suwanna; Mach, Robert H; Xia, Younan | Advanced healthcare materials | 2014 Mar 26 | NULL | 24677807 |
| REST and stress resistance in ageing and Alzheimer's disease. | Lu, Tao; Aron, Liviu; Zullo, Joseph; Pan, Ying; Kim, Haeyoung; Chen, Yiwen; Yang, Tun-Hsiang; Kim, Hyun-Min; Drake, Derek; Liu, X Shirley; Bennett, David A; Colaiacovo, Monica P; Yankner, Bruce A | Nature | 2014 Mar 27 | 448-54 | 24670762 |
| An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge. | Brownstein, Catherine A; Beggs, Alan H; Homer, Nils; Merriman, Barry; Yu, Timothy W; Flannery, Katherine C; DeChene, Elizabeth T; Towne, Meghan C; Savage, Sarah K; Price, Emily N; Holm, Ingrid A; Luquette, Lovelace J; Lyon, Elaine; Majzoub, Joseph; Neupert, Peter; McCallie Jr, David; Szolovits, Peter; Willard, Huntington F; Mendelsohn, Nancy J; Temme, Renee; Finkel, Richard S; Yum, Sabrina W; Medne, Livija; Sunyaev, Shamil R; Adzhubey, Ivan; Cassa, Christopher A; de Bakker, Paul I W; Duzkale, Hatice; Dworzy?ski, Piotr; Fairbrother, William; Francioli, Laurent; Funke, Birgit H; Giovanni, Monica A; Handsaker, Robert E; Lage, Kasper; Lebo, Matthew S; Lek, Monkol; Leshchiner, Ignaty; MacArthur, Daniel G; McLaughlin, Heather M; Murray, Michael F; Pers, Tune H; Polak, Paz P; Raychaudhuri, Soumya; Rehm, Heidi L; Soemedi, Rachel; Stitziel, Nathan O; Vestecka, Sara; Supper, Jochen; Gugenmus, Claudia; Klocke, Bernward; Hahn, Alexander; Schubach, Max; Menzel, Mortiz; Biskup, Saskia; Freisinger, Peter; Deng, Mario; Braun, Martin; Perner, Sven; Smith, Richard J H; Andorf, Janeen L; Huang, Jian; Ryckman, Kelli; Sheffield, Val C; Stone, Edwin M; Bair, Thomas; Black-Ziegelbein, E Ann; Braun, Terry A; Darbro, Benjamin; DeLuca, Adam P; Kolbe, Diana L; Scheetz, Todd E; Shearer, Aiden E; Sompallae, Rama; Wang, Kai; Bassuk, Alexander G; Edens, Erik; Mathews, Katherine; Moore, Steven A; Shchelochkov, Oleg A; Trapane, Pamela; Bossler, Aaron; Campbell, Colleen A; Heusel, Jonathan W; Kwitek, Anne; Maga, Tara; Panzer, Karin; Wassink, Thomas; Van Daele, Douglas; Azaiez, Hela; Booth, Kevin; Meyer, Nic; Segal, Michael M; Williams, Marc S; Tromp, Gerard; White, Peter; Corsmeier, Donald; Fitzgerald-Butt, Sara; Herman, Gail; Lamb-Thrush, Devon; McBride, Kim L; Newsom, David; Pierson, Christopher R; Rakowsky, Alexander T; Maver, Ale?; Lovre?i?, Luca; Palanda?i?, Anja; Peterlin, Borut; Torkamani, Ali; Wedell, Anna; Huss, Mikael; Alexeyenko, Andrey; Lindvall, Jessica M; Magnusson, Måns; Nilsson, Daniel; Stranneheim, Henrik; Taylan, Fulya; Gilissen, Christian; Hoischen, Alexander; van Bon, Bregje; Yntema, Helger; Nelen, Marcel; Zhang, Weidong; Sager, Jason; Zhang, Lu; Blair, Kathryn; Kural, Deniz; Cariaso, Michael; Lennon, Greg G; Javed, Asif; Agrawal, Saloni; Ng, Pauline C; Sandhu, Komal S; Krishna, Shuba; Veeramachaneni, Vamsi; Isakov, Ofer; Halperin, Eran; Friedman, Eitan; Shomron, Noam; Glusman, Gustavo; Roach, Jared C; Caballero, Juan; Cox, Hannah C; Mauldin, Denise; Ament, Seth A; Rowen, Lee; Richards, Daniel R; San Lucas, F Anthony; Gonzalez-Garay, Manuel L; Caskey, C Thomas; Bai, Yu; Huang, Ying; Fang, Fang; Zhang, Yan; Wang, Zhengyuan; Barrera, Jorge; Garcia-Lobo, Juan M; González-Lamuño, Domingo; Llorca, Javier; Rodriguez, Maria C; Varela, Ignacio; Reese, Martin G; De La Vega, Francisco M; Kiruluta, Edward; Cargill, Michele; Hart, Reece K; Sorenson, Jon M; Lyon, Gholson J; Stevenson, David A; Bray, Bruce E; Moore, Barry M; Eilbeck, Karen; Yandell, Mark; Zhao, Hongyu; Hou, Lin; Chen, Xiaowei; Yan, Xiting; Chen, Mengjie; Li, Cong; Yang, Can; Gunel, Murat; Li, Peining; Kong, Yong; Alexander, Austin C; Albertyn, Zayed I; Boycott, Kym M; Bulman, Dennis E; Gordon, Paul M K; Innes, A Micheil; Knoppers, Bartha M; Majewski, Jacek; Marshall, Christian R; Parboosingh, Jillian S; Sawyer, Sarah L; Samuels, Mark E; Schwartzentruber, Jeremy; Kohane, Isaac S; Margulies, David M | Genome biology. | 2014 Mar 25; | 24667040 | |
| The new century of the brain. | Yuste, Rafael; Church, George M | Scientific American. | 2014 Mar; | 38-45 | 24660326 |
| The Determinants of Federal and State Enforcement of Workplace Safety Regulations: OSHA Inspections 1990-2010. | Jung, Juergen; Makowsky, Michael D | Journal of regulatory economics | 2014 Feb 1 | Jan-33 | 24659856 |
| Optimizing cardiac resynchronization therapy to minimize ATP consumption heterogeneity throughout the left ventricle: a simulation analysis using a canine heart failure model. | Hu, Yuxuan; Gurev, Viatcheslav; Constantino, Jason; Trayanova, Natalia | Heart rhythm : the official journal of the Heart Rhythm Society. | 2014 Jun; | 1063-9 | 24657430 |
| Whole-brain activity maps reveal stereotyped, distributed networks for visuomotor behavior. | Portugues, Ruben; Feierstein, Claudia E; Engert, Florian; Orger, Michael B | Neuron | 2014 Mar 19 | 1328-43 | 24656252 |
| Metabolic regulation of immune responses. | Ganeshan, Kirthana; Chawla, Ajay | Annual review of immunology | 2014 | 609-34 | 24655299 |
| Intention estimation in brain-machine interfaces. | Fan, Joline M; Nuyujukian, Paul; Kao, Jonathan C; Chestek, Cynthia A; Ryu, Stephen I; Shenoy, Krishna V | Journal of neural engineering | 2014 Feb | 16004 | 24654266 |
| Genetically encoded molecular probes to visualize and perturb signaling dynamics in living biological systems. | Sample, Vedangi; Mehta, Sohum; Zhang, Jin | Journal of cell science | 2014 Mar 15 | 1151-60 | 24634506 |
| Reconstitution of contractile actomyosin arrays. | Murrell, Michael; Thoresen, Todd; Gardel, Margaret | Methods in enzymology. | 2014; | 265-82 | 24630112 |
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| Plasmonics-enhanced and optically modulated delivery of gold nanostars into brain tumor. | Yuan, Hsiangkuo; Wilson, Christy M; Xia, Jun; Doyle, Sarah L; Li, Shuqin; Fales, Andrew M; Liu, Yang; Ozaki, Ema; Mulfaul, Kelly; Hanna, Gabi; Palmer, Gregory M; Wang, Lihong V; Grant, Gerald A; Vo-Dinh, Tuan | Nanoscale | 2014 Apr 21 | 4078-82 | 24619405 |
| Subunit composition of glutamate and gamma-aminobutyric acid receptors in status epilepticus. | Loddenkemper, Tobias; Talos, Delia M; Cleary, Ryan T; Joseph, Annelise; Sanchez Fernandez, Ivan; Alexopoulos, Andreas; Kotagal, Prakash; Najm, Imad; Jensen, Frances E | Epilepsy research | 2014 May | 605-15 | 24613745 |
| The transcription factor titration effect dictates level of gene expression. | Brewster, Robert C; Weinert, Franz M; Garcia, Hernan G; Song, Dan; Rydenfelt, Mattias; Phillips, Rob | Cell | 2014 Mar 13 | 1312-23 | 24612990 |
| CMV Infection, TLR-2 and -4 Expression, and Cytokine Profiles in Early-Onset Preeclampsia with HELLP Syndrome. | Xie, Fang; von Dadelszen, Peter; Nadeau, Joseph | American journal of reproductive immunology (New York, N.Y. : 1989) | 2014 Feb 24 | NULL | 24612145 |
| Enhancing the specificity of recombinase-mediated genome engineering through dimer interface redesign. | Gaj, Thomas; Sirk, Shannon J; Tingle, Ryan D; Mercer, Andrew C; Wallen, Mark C; Barbas 3rd, Carlos F | Journal of the American Chemical Society | 2014 Apr 2 | 5047-56 | 24611715 |
| Cross-linking in the silks of bees, ants and hornets. | Campbell, Peter M; Trueman, Holly E; Zhang, Qiang; Kojima, Katsura; Kameda, Tsunenori; Sutherland, Tara D | Insect biochemistry and molecular biology | 2014 May | 40-50 | 24607851 |
| Dependence of optical scattering from Intralipid in gelatin-gel based tissue-mimicking phantoms on mixing temperature and time. | Lai, Puxiang; Xu, Xiao; Wang, Lihong V | Journal of biomedical optics | 2014 Mar | 35002 | 24604534 |
| Common genetic variants modulate pathogen-sensing responses in human dendritic cells. | Lee, Mark N; Ye, Chun; Villani, Alexandra-Chloe; Raj, Towfique; Li, Weibo; Eisenhaure, Thomas M; Imboywa, Selina H; Chipendo, Portia I; Ran, F Ann; Slowikowski, Kamil; Ward, Lucas D; Raddassi, Khadir; McCabe, Cristin; Lee, Michelle H; Frohlich, Irene Y; H | Science (New York, N.Y.) | 2014 Mar 7 | 1246980 | 24604203 |
| Medicine. Combating evolution to fight disease. | Rosenberg, Susan M; Queitsch, Christine | Science (New York, N.Y.) | 2014 Mar 7 | 1088-9 | 24604189 |
| Maternal nutrition induces pervasive gene expression changes but no detectable DNA methylation differences in the liver of adult offspring. | Cannon, Matthew V; Buchner, David A; Hester, James; Miller, Hadley; Sehayek, Ephraim; Nadeau, Joseph H; Serre, David | PloS one | 2014 | e90335 | 24594983 |
| Recasting the theory of mosquito-borne pathogen transmission dynamics and control. | Smith, David L; Perkins, T Alex; Reiner Jr, Robert C; Barker, Christopher M; Niu, Tianchan; Chaves, Luis Fernando; Ellis, Alicia M; George, Dylan B; Le Menach, Arnaud; Pulliam, Juliet R C; Bisanzio, Donal; Buckee, Caroline; Chiyaka, Christinah; Cummings, | Transactions of the Royal Society of Tropical Medicine and Hygiene | 2014 Apr | 185-97 | 24591453 |
| Calibration-free absolute quantification of particle concentration by statistical analyses of photoacoustic signals in vivo. | Zhou, Yong; Yao, Junjie; Maslov, Konstantin I; Wang, Lihong V | Journal of biomedical optics | 2014 Mar | 37001 | 24589987 |
| Integrated photoacoustic, confocal, and two-photon microscope. | Rao, Bin; Soto, Florentina; Kerschensteiner, Daniel; Wang, Lihong V | Journal of biomedical optics | 2014 Mar | 36002 | 24589986 |
| Pharmacokinetics of natural and engineered secreted factors delivered by mesenchymal stromal cells. | Elman, Jessica S; Murray, Ryan C; Murray, Ryan M; Wang, Fangjing; Shen, Keyue; Gao, Shan; Conway, Kevin E; Yarmush, Martin L; Tannous, Bakhos A; Weissleder, Ralph; Parekkadan, Biju | PloS one. | 2014; | 24587097 | |
| CRISPR-Cas systems for editing, regulating and targeting genomes. | Sander, Jeffry D; Joung, J Keith | Nature biotechnology | 2014 Apr | 347-55 | 24584096 |
| Lestaurtinib (CEP-701) attenuates "second hit" kainic acid-induced seizures following early life hypoxic seizures. | Obeid, Makram; Rosenberg, Evan C; Klein, Peter M; Jensen, Frances E | Epilepsy research | 2014 May | 806-10 | 24582454 |
| Statistical mechanical model of coupled transcription from multiple promoters due to transcription factor titration. | Rydenfelt, Mattias; Cox, Robert Sidney; Garcia, Hernan; Phillips, Rob | Physical review. E, Statistical, nonlinear, and soft matter physics | 2014 Jan | 12702 | 24580252 |
| Generation of complexity in fungal terpene biosynthesis: discovery of a multifunctional cytochrome P450 in the fumagillin pathway. | Lin, Hsiao-Ching; Tsunematsu, Yuta; Dhingra, Sourabh; Xu, Wei; Fukutomi, Manami; Chooi, Yit-Heng; Cane, David E; Calvo, Ana M; Watanabe, Kenji; Tang, Yi | Journal of the American Chemical Society | 2014 Mar 19 | 4426-36 | 24568283 |
| The future of whole-cell modeling. | Macklin, Derek N; Ruggero, Nicholas A; Covert, Markus W | Current opinion in biotechnology | 2014 Feb 17 | 111-115 | 24556244 |
| Approach for targeting Ras with small molecules that activate SOS-mediated nucleotide exchange. | Burns, Michael C; Sun, Qi; Daniels, R Nathan; Camper, DeMarco; Kennedy, J Phillip; Phan, Jason; Olejniczak, Edward T; Lee, Taekyu; Waterson, Alex G; Rossanese, Olivia W; Fesik, Stephen W | Proceedings of the National Academy of Sciences of the United States of America | 2014 Mar 4 | 3401-6 | 24550516 |
| Kinetic and equilibrium binding characterization of aptamers to small molecules using a label-free, sensitive, and scalable platform. | Chang, Andrew L; McKeague, Maureen; Liang, Joe C; Smolke, Christina D | Analytical chemistry. | 2014 Apr 1; | 3273-8 | 24548121 |
| fast_protein_cluster: parallel and optimized clustering of large-scale protein modeling data. | Hung, Ling-Hong; Samudrala, Ram | Bioinformatics (Oxford, England) | 2014 Jun 15 | 1774-6 | 24532722 |
| Verapamil, and its metabolite norverapamil, inhibit macrophage-induced, bacterial efflux pump-mediated tolerance to multiple anti-tubercular drugs. | Adams, Kristin N; Szumowski, John D; Ramakrishnan, Lalita | The Journal of infectious diseases. | 2014 Aug 1; | 456-66 | 24532601 |
| Broad specificity profiling of TALENs results in engineered nucleases with improved DNA-cleavage specificity. | Guilinger, John P; Pattanayak, Vikram; Reyon, Deepak; Tsai, Shengdar Q; Sander, Jeffry D; Joung, J Keith; Liu, David R | Nature methods | 2014 Apr | 429-35 | 24531420 |
| Statistical modeling of behavioral dynamics during propofol-induced loss of consciousness. | Wong, Kin Foon Kevin; Smith, Anne C; Pierce, Eric T; Harrell, P Grace; Walsh, John L; Salazar-Gomez, Andres Felipe; Tavares, Casie L; Purdon, Patrick L; Brown, Emery N | Journal of neuroscience methods | 2014 Apr 30 | 65-74 | 24530701 |
| Crystal structure of Cas9 in complex with guide RNA and target DNA. | Nishimasu, Hiroshi; Ran, F Ann; Hsu, Patrick D; Konermann, Silvana; Shehata, Soraya I; Dohmae, Naoshi; Ishitani, Ryuichiro; Zhang, Feng; Nureki, Osamu | Cell | 2014 Feb 27 | 935-49 | 24529477 |
| Structural insights on the role of antibodies in HIV-1 vaccine and therapy. | West Jr, Anthony P; Scharf, Louise; Scheid, Johannes F; Klein, Florian; Bjorkman, Pamela J; Nussenzweig, Michel C | Cell | 2014 Feb 13 | 633-48 | 24529371 |
| Lipid Modulation of Calcium Flux through CaV2.3 Regulates Acrosome Exocytosis and Fertilization. | Cohen, Roy; Buttke, Danielle E; Asano, Atsushi; Mukai, Chinatsu; Nelson, Jacquelyn L; Ren, Dongjun; Miller, Richard J; Cohen-Kutner, Moshe; Atlas, Daphne; Travis, Alexander J | Developmental cell | 2014 Feb 10 | 310-21 | 24525187 |
| Dissecting genomic diversity, one cell at a time. | Blainey, Paul C; Quake, Stephen R | Nature methods | 2014 Jan | 19-21 | 24524132 |
| Photoacoustic thermography of tissue. | Ke, Haixin; Tai, Stephen; Wang, Lihong V | Journal of biomedical optics | 2014 | 26003 | 24522803 |
| Emotion perception, but not affect perception, is impaired with semantic memory loss. | Lindquist, Kristen A; Gendron, Maria; Barrett, Lisa Feldman; Dickerson, Bradford C | Emotion (Washington, D.C.) | 2014 Apr | 375-87 | 24512242 |
| Central role for RNase YbeY in Hfq-dependent and Hfq-independent small-RNA regulation in bacteria. | Pandey, Shree P; Winkler, Jonathan A; Li, Hu; Camacho, Diogo M; Collins, James J; Walker, Graham C | BMC genomics | 2014 | 121 | 24511998 |
| Metabolite Profiling of 5'-AMP-Induced Hypometabolism. | Zhao, Zhaoyang; Van Oort, Anita; Tao, Zhenyin; O'Brien 3rd, William G; Lee, Cheng Chi | Metabolomics : Official journal of the Metabolomic Society | 2014 Feb 1 | 63-76 | 24511307 |
| Visualizing Genomes with Oligopaint FISH Probes. | Beliveau, Brian J; Apostolopoulos, Nicholas; Wu, Chao-Ting | Current protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.] | 2014 | 14.23.1-14.23.20 | 24510436 |
| Neural circuits as computational dynamical systems. | Sussillo, David | Current opinion in neurobiology | 2014 Apr | 156-63 | 24509098 |
| Axonal transport of TDP-43 mRNA granules is impaired by ALS-causing mutations. | Alami, Nael H; Smith, Rebecca B; Carrasco, Monica A; Williams, Luis A; Winborn, Christina S; Han, Steve S W; Kiskinis, Evangelos; Winborn, Brett; Freibaum, Brian D; Kanagaraj, Anderson; Clare, Alison J; Badders, Nisha M; Bilican, Bilada; Chaum, Edward; Chandran, Siddharthan; Shaw, Christopher E; Eggan, Kevin C; Maniatis, Tom; Taylor, J Paul | Neuron. | 2014 Feb 05; | 24507191 | |
| Self-recalibrating classifiers for intracortical brain-computer interfaces. | Bishop, William; Chestek, Cynthia C; Gilja, Vikash; Nuyujukian, Paul; Foster, Justin D; Ryu, Stephen I; Shenoy, Krishna V; Yu, Byron M | Journal of neural engineering | 2014 Apr | 26001 | 24503597 |
| Cultural Relativity in Perceiving Emotion From Vocalizations. | Gendron, Maria; Roberson, Debi; van der Vyver, Jacoba Marieta; Barrett, Lisa Feldman | Psychological science | 2014 Feb 5 | NULL | 24501109 |
| Identification of cinnabarinic acid as a novel endogenous aryl hydrocarbon receptor ligand that drives IL-22 production. | Lowe, Margaret M; Mold, Jeff E; Kanwar, Bittoo; Huang, Yong; Louie, Alexander; Pollastri, Michael P; Wang, Cuihua; Patel, Gautam; Franks, Diana G; Schlezinger, Jennifer; Sherr, David H; Silverstone, Allen E; Hahn, Mark E; McCune, Joseph M | PloS one | 2014 | e87877 | 24498387 |
| Institutions and cooperation in an ecology of games. | Smaldino, Paul E; Lubell, Mark | Artificial life | 2014 | 207-21 | 24494613 |
| Identification of germline transcriptional regulatory elements in Aedes aegypti. | Akbari, Omar S; Papathanos, Philippos A; Sandler, Jeremy E; Kennedy, Katie; Hay, Bruce A | Scientific reports | 2014 | 3954 | 24492376 |
| Discovery of a potent stapled helix peptide that binds to the 70N domain of replication protein A. | Frank, Andreas O; Vangamudi, Bhavatarini; Feldkamp, Michael D; Souza-Fagundes, Elaine M; Luzwick, Jessica W; Cortez, David; Olejniczak, Edward T; Waterson, Alex G; Rossanese, Olivia W; Chazin, Walter J; Fesik, Stephen W | Journal of medicinal chemistry | 2014 Mar 27 | 2455-61 | 24491171 |
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| Correction: Distal Effect of Amino Acid Substitutions in CYP2C9 Polymorphic Variants Causes Differences in Interatomic Interactions against (S)-Warfarin. | Lertkiatmongkol, Panida; Assawamakin, Anunchai; White, George; Chopra, Gaurav; Rongnoparut, Pornpimol; Samudrala, Ram; Tongsima, Sissades | PloS one | 2013 | NULL | 24137505 |
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| AMPA receptor antagonist NBQX attenuates later-life epileptic seizures and autistic-like social deficits following neonatal seizures. | Lippman-Bell, Jocelyn J; Rakhade, Sanjay N; Klein, Peter M; Obeid, Makram; Jackson, Michele C; Joseph, Annelise; Jensen, Frances E | Epilepsia | 2013 Nov | 1922-32 | 24117347 |
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| Reference-free harmonic regression technique to remove EEG-fMRI ballistocardiogram artifacts. | Krishnaswamy, Pavitra; Bonmassar, Giorgio; Purdon, Patrick L; Brown, Emery N | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference | 2013 | 5426-9 | 24110963 |
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| Visualization of synaptic inhibition with an optogenetic sensor developed by cell-free protein engineering automation. | Grimley, Joshua S; Li, Li; Wang, Weina; Wen, Lei; Beese, Lorena S; Hellinga, Homme W; Augustine, George J | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2013 Oct 9 | 16297-309 | 24107961 |
| Inconvenient truths in the pursuit of scientific knowledge and public health. | Relman, David A | The Journal of infectious diseases | 2014 Jan 15 | 170-2 | 24106297 |
| Enhancement of photoacoustic tomography by ultrasonic computed tomography based on optical excitation of elements of a full-ring transducer array. | Xia, Jun; Huang, Chao; Maslov, Konstantin; Anastasio, Mark A; Wang, Lihong V | Optics letters | 2013 Aug 15 | 3140-3 | 24104670 |
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| Photoacoustic recovery after photothermal bleaching in living cells. | Li, Chiye; Zhang, Chi; Gao, Liang; Garcia-Uribe, Alejandro; Wang, Lihong V | Journal of biomedical optics | 2013 | 106004 | 24089253 |
| Gene Expression Profiling of a Hypoxic Seizure Model of Epilepsy Suggests a Role for mTOR and Wnt Signaling in Epileptogenesis. | Theilhaber, Joachim; Rakhade, Sanjay N; Sudhalter, Judy; Kothari, Nayantara; Klein, Peter; Pollard, Jack; Jensen, Frances E | PloS one | 2013 | e74428 | 24086344 |
| Higher 5-hydroxymethylcytosine identifies immortal DNA strand chromosomes in asymmetrically self-renewing distributed stem cells. | Huh, Yang Hoon; Cohen, Justin; Sherley, James L | Proceedings of the National Academy of Sciences of the United States of America | 2013 Oct 15 | 16862-7 | 24082118 |
| Identification of discrete functional subregions of the human periaqueductal gray. | Satpute, Ajay B; Wager, Tor D; Cohen-Adad, Julien; Bianciardi, Marta; Choi, Ji-Kyung; Buhle, Jason T; Wald, Lawrence L; Barrett, Lisa Feldman | Proceedings of the National Academy of Sciences of the United States of America | 2013 Oct 15 | 17101-6 | 24082116 |
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| The impact of heterogeneous transmission on the establishment and spread of antimalarial drug resistance. | Klein, Eili Y | Journal of theoretical biology | 2014 Jan 7 | 177-85 | 24076451 |
| Dendritic Glutamate Receptor mRNAs Show Contingent Local Hotspot-Dependent Translational Dynamics. | Kim, Tae Kyung; Sul, Jai-Yoon; Helmfors, Henrik; Langel, Ulo; Kim, Junhyong; Eberwine, James | Cell reports | 2013 Oct 17 | 114-25 | 24075992 |
| Maternal and offspring pools of osteocalcin influence brain development and functions. | Oury, Franck; Khrimian, Lori; Denny, Christine A; Gardin, Antoine; Chamouni, Alexandre; Goeden, Nick; Huang, Yung-yu; Lee, Hojoon; Srinivas, Prashanth; Gao, Xiao-Bing; Suyama, Shigetomo; Langer, Thomas; Mann, John J; Horvath, Tamas L; Bonnin, Alexandre; Karsenty, Gerard | Cell. | 2013 Sep 26; | 228-41 | 24074871 |
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| Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota. | Kashyap, Purna C; Marcobal, Angela; Ursell, Luke K; Smits, Samuel A; Sonnenburg, Erica D; Costello, Elizabeth K; Higginbottom, Steven K; Domino, Steven E; Holmes, Susan P; Relman, David A; Knight, Rob; Gordon, Jeffrey I; Sonnenburg, Justin L | Proceedings of the National Academy of Sciences of the United States of America | 2013 Oct 15 | 17059-64 | 24062455 |
| Chemical analog-to-digital signal conversion based on robust threshold chemistry and its evaluation in the context of microfluidics-based quantitative assays. | Huynh, Toan; Sun, Bing; Li, Liang; Nichols, Kevin P; Koyner, Jay L; Ismagilov, Rustem F | Journal of the American Chemical Society | 2013 Oct 2 | 14775-83 | 24060606 |
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| Developmental Expression of N-Methyl-D-Aspartate (NMDA) Receptor Subunits in Human White and Gray Matter: Potential Mechanism of Increased Vulnerability in the Immature Brain. | Jantzie, Lauren L; Talos, Delia M; Jackson, Michele C; Park, Hyun-Kyung; Graham, Dionne A; Lechpammer, Mirna; Folkerth, Rebecca D; Volpe, Joseph J; Jensen, Frances E | Cerebral cortex (New York, N.Y. : 1991) | 2013 Sep 17 | NULL | 24046081 |
| Sensorimotor structure of Drosophila larva phototaxis. | Kane, Elizabeth A; Gershow, Marc; Afonso, Bruno; Larderet, Ivan; Klein, Mason; Carter, Ashley R; de Bivort, Benjamin L; Sprecher, Simon G; Samuel, Aravinthan D T | Proceedings of the National Academy of Sciences of the United States of America. | 2013 Oct 01; | 24043822 | |
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| Dampening of expression oscillations by synchronous regulation of a microRNA and its target. | Kim, Dong Hyun; Grun, Dominic; van Oudenaarden, Alexander | Nature genetics | 2013 Sep 15 | NULL | 24036951 |
| 25th anniversary article: galvanic replacement: a simple and versatile route to hollow nanostructures with tunable and well-controlled properties. | Xia, Xiaohu; Wang, Yi; Ruditskiy, Aleksey; Xia, Younan | Advanced materials (Deerfield Beach, Fla.) | 2013 Nov 26 | 6313-33 | 24027074 |
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| ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation. | Lin, John Y; Knutsen, Per Magne; Muller, Arnaud; Kleinfeld, David; Tsien, Roger Y | Nature neuroscience | 2013 Oct | 1499-508 | 23995068 |
| Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity. | Ran, F Ann; Hsu, Patrick D; Lin, Chie-Yu; Gootenberg, Jonathan S; Konermann, Silvana; Trevino, Alexandro E; Scott, David A; Inoue, Azusa; Matoba, Shogo; Zhang, Yi; Zhang, Feng | Cell | 2013 Sep 12 | 1380-9 | 23992846 |
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| Adaptive translation as a mechanism of stress response and adaptation. | Pan, Tao | Annual review of genetics | 2013 | 121-37 | 23988117 |
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| Expanding the primate body schema in sensorimotor cortex by virtual touches of an avatar. | Shokur, Solaiman; O'Doherty, Joseph E; Winans, Jesse A; Bleuler, Hannes; Lebedev, Mikhail A; Nicolelis, Miguel A L | Proceedings of the National Academy of Sciences of the United States of America | 2013 Sep 10 | 15121-6 | 23980141 |
| Directed evolution of the TALE N-terminal domain for recognition of all 5' bases. | Lamb, Brian M; Mercer, Andrew C; Barbas 3rd, Carlos F | Nucleic acids research | 2013 Nov | 9779-85 | 23980031 |
| Targeted deletion and inversion of tandemly arrayed genes in Arabidopsis thaliana using zinc finger nucleases. | Qi, Yiping; Li, Xiaohong; Zhang, Yong; Starker, Colby G; Baltes, Nicholas J; Zhang, Feng; Sander, Jeffry D; Reyon, Deepak; Joung, J Keith; Voytas, Daniel F | G3 (Bethesda, Md.) | 2013 Oct | 1707-15 | 23979943 |
| Complexity generation in fungal polyketide biosynthesis: a spirocycle-forming P450 in the concise pathway to the antifungal drug griseofulvin. | Cacho, Ralph A; Chooi, Yit-Heng; Zhou, Hui; Tang, Yi | ACS chemical biology | 2013 Oct 18 | 2322-30 | 23978092 |
| Optical-resolution photoacoustic microscopy: auscultation of biological systems at the cellular level. | Hu, Song; Wang, Lihong V | Biophysical journal | 2013 Aug 20 | 841-7 | 23972836 |
| Circadian gene Bmal1 regulates diurnal oscillations of Ly6C(hi) inflammatory monocytes. | Nguyen, Khoa D; Fentress, Sarah J; Qiu, Yifu; Yun, Karen; Cox, Jeffery S; Chawla, Ajay | Science (New York, N.Y.) | 2013 Sep 27 | 1483-8 | 23970558 |
| Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein. | Feldkamp, Michael D; Frank, Andreas O; Kennedy, J Phillip; Patrone, James D; Vangamudi, Bhavatarini; Waterson, Alex G; Fesik, Stephen W; Chazin, Walter J | Biochemistry | 2013 Sep 17 | 6515-24 | 23962067 |
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| Salmonella require the fatty acid regulator PPARýý for the establishment of a metabolic environment essential for long-term persistence. | Eisele, Nicholas A; Ruby, Thomas; Jacobson, Amanda; Manzanillo, Paolo S; Cox, Jeffery S; Lam, Lilian; Mukundan, Lata; Chawla, Ajay; Monack, Denise M | Cell host & microbe | 2013 Aug 14 | 171-82 | 23954156 |
| Nanoelectronics Meets Biology: From New Nanoscale Devices for Live-Cell Recording to 3D Innervated Tissues. | Duan, Xiaojie; Lieber, Charles M | Chemistry, an Asian journal | 2013 Oct | 2304-14 | 23946279 |
| In silico abstraction of zinc finger nuclease cleavage profiles reveals an expanded landscape of off-target sites. | Sander, Jeffry D; Ramirez, Cherie L; Linder, Samantha J; Pattanayak, Vikram; Shoresh, Noam; Ku, Manching; Foden, Jennifer A; Reyon, Deepak; Bernstein, Bradley E; Liu, David R; Joung, J Keith | Nucleic acids research | 2013 Oct | e181 | 23945932 |
| Phospholipase B is activated in response to sterol removal and stimulates acrosome exocytosis in murine sperm. | Asano, Atsushi; Nelson-Harrington, Jacquelyn L; Travis, Alexander J | The Journal of biological chemistry | 2013 Sep 27 | 28104-15 | 23943622 |
| Optical clearing-aided photoacoustic microscopy with enhanced resolution and imaging depth. | Zhou, Yong; Yao, Junjie; Wang, Lihong V | Optics letters | 2013 Jul 15 | 2592-5 | 23939121 |
| Stochastic cytokine expression induces mixed T helper cell States. | Fang, Miaoqing; Xie, Huangming; Dougan, Stephanie K; Ploegh, Hidde; van Oudenaarden, Alexander | PLoS biology | 2013 Jul | e1001618 | 23935453 |
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| Efficient preloading of the ventricles by a properly timed atrial contraction underlies stroke work improvement in the acute response to cardiac resynchronization therapy. | Hu, Yuxuan; Gurev, Viatcheslav; Constantino, Jason; Trayanova, Natalia | Heart rhythm : the official journal of the Heart Rhythm Society. | 2013 Dec; | 1800-6 | 23928177 |
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| Heritable and precise zebrafish genome editing using a CRISPR-Cas system. | Hwang, Woong Y; Fu, Yanfang; Reyon, Deepak; Maeder, Morgan L; Kaini, Prakriti; Sander, Jeffry D; Joung, J Keith; Peterson, Randall T; Yeh, Jing-Ruey Joanna | PloS one | 2013 | e68708 | 23874735 |
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| Coordination of heart and lung co-development by a multipotent cardiopulmonary progenitor. | Peng, Tien; Tian, Ying; Boogerd, Cornelis J; Lu, Min Min; Kadzik, Rachel S; Stewart, Kathleen M; Evans, Sylvia M; Morrisey, Edward E | Nature | 2013 Aug 29 | 589-92 | 23873040 |
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| Heparan sulfate proteoglycans containing a glypican 5 core and 2-O-sulfo-iduronic acid function as Sonic Hedgehog co-receptors to promote proliferation. | Witt, Rochelle M; Hecht, Marie-Lyn; Pazyra-Murphy, Maria F; Cohen, Samuel M; Noti, Christian; van Kuppevelt, Toin H; Fuller, Maria; Chan, Jennifer A; Hopwood, John J; Seeberger, Peter H; Segal, Rosalind A | The Journal of biological chemistry | 2013 Sep 6 | 26275-88 | 23867465 |
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| RNA interference knockdown of DNA methyl-transferase 3 affects gene alternative splicing in the honey bee. | Li-Byarlay, Hongmei; Li, Yang; Stroud, Hume; Feng, Suhua; Newman, Thomas C; Kaneda, Megan; Hou, Kirk K; Worley, Kim C; Elsik, Christine G; Wickline, Samuel A; Jacobsen, Steven E; Ma, Jian; Robinson, Gene E | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jul 30 | 12750-5 | 23852726 |
| A neurodegeneration-specific gene-expression signature of acutely isolated microglia from an amyotrophic lateral sclerosis mouse model. | Chiu, Isaac M; Morimoto, Emiko T A; Goodarzi, Hani; Liao, Jennifer T; O'Keeffe, Sean; Phatnani, Hemali P; Muratet, Michael; Carroll, Michael C; Levy, Shawn; Tavazoie, Saeed; Myers, Richard M; Maniatis, Tom | Cell reports | 2013 Jul 25 | 385-401 | 23850290 |
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| Thymosin beta 4 is dispensable for murine cardiac development and function. | Banerjee, Indroneal; Zhang, Jianlin; Moore-Morris, Thomas; Lange, Stephan; Shen, Tao; Dalton, Nancy D; Gu, Yusu; Peterson, Kirk L; Evans, Sylvia M; Chen, Ju | Circulation research | 2012 Feb 3 | 456-64 | 22158707 |
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| Interaction of *-synuclein with vesicles that mimic mitochondrial membranes. | Zigoneanu, Imola G; Yang, Yoo Jeong; Krois, Alexander S; Haque, Emdadul; Pielak, Gary J | Biochimica et biophysica acta | 2012 Mar | 512-9 | 22155643 |
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| Extraordinary nonlinear absorption in 3D bowtie nanoantennas. | Suh, Jae Yong; Huntington, Mark D; Kim, Chul Hoon; Zhou, Wei; Wasielewski, Michael R; Odom, Teri W | Nano letters | 2012 Jan 11 | 269-74 | 22149352 |
| Quantifying the coverage density of poly(ethylene glycol) chains on the surface of gold nanostructures. | Xia, Xiaohu; Yang, Miaoxin; Wang, Yucai; Zheng, Yiqun; Li, Qingge; Chen, Jingyi; Xia, Younan | ACS nano | 2012 Jan 24 | 512-22 | 22148912 |
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| Using iPSC-derived neurons to uncover cellular phenotypes associated with Timothy syndrome. | Pasca, Sergiu P; Portmann, Thomas; Voineagu, Irina; Yazawa, Masayuki; Shcheglovitov, Aleksandr; Pasca, Anca M; Cord, Branden; Palmer, Theo D; Chikahisa, Sachiko; Nishino, Seiji; Bernstein, Jonathan A; Hallmayer, Joachim; Geschwind, Daniel H; Dolmetsch, Ricardo E | Nature medicine. | 2011 Dec; | 1657-62 | 22120178 |
| Single-molecule transcript counting of stem-cell markers in the mouse intestine. | Itzkovitz, Shalev; Lyubimova, Anna; Blat, Irene C; Maynard, Mindy; van Es, Johan; Lees, Jacqueline; Jacks, Tyler; Clevers, Hans; van Oudenaarden, Alexander | Nature cell biology | 2012 Jan | 106-14 | 22119784 |
| SV119-gold nanocage conjugates: a new platform for targeting cancer cells via sigma-2 receptors. | Wang, Yucai; Xu, Jinbin; Xia, Xiaohu; Yang, Miaoxin; Vangveravong, Suwanna; Chen, Jingyi; Mach, Robert H; Xia, Younan | Nanoscale | 2012 Jan 21 | 421-4 | 22113350 |
| Interaction of streptavidin-based peptide-MHC oligomers (tetramers) with cell-surface TCRs. | Stone, Jennifer D; Artyomov, Maxim N; Chervin, Adam S; Chakraborty, Arup K; Eisen, Herman N; Kranz, David M | Journal of immunology (Baltimore, Md. : 1950). | 2011 Dec 15; | 6281-90 | 22102724 |
| Synthesis of monolithic graphene-graphite integrated electronics. | Park, Jang-Ung; Nam, SungWoo; Lee, Mi-Sun; Lieber, Charles M | Nature materials | 2012 Feb | 120-5 | 22101813 |
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| Prospect for feedback guided surgery with ultra-short pulsed laser light. | Jeong, Diana C; Tsai, Philbert S; Kleinfeld, David | Current opinion in neurobiology | 2012 Feb | 24-33 | 22088392 |
| STATE-SPACE SOLUTIONS TO THE DYNAMIC MAGNETOENCEPHALOGRAPHY INVERSE PROBLEM USING HIGH PERFORMANCE COMPUTING. | Long, Christopher J; Purdon, Patrick L; Temereanca, Simona; Desai, Neil U; Hamalainen, Matti S; Brown, Emery N | The annals of applied statistics | 2011 Jun 1 | 1207-1228 | 22081780 |
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| Large-scale automated histology in the pursuit of connectomes. | Kleinfeld, David; Bharioke, Arjun; Blinder, Pablo; Bock, Davi D; Briggman, Kevin L; Chklovskii, Dmitri B; Denk, Winfried; Helmstaedter, Moritz; Kaufhold, John P; Lee, Wei-Chung Allen; Meyer, Hanno S; Micheva, Kristina D; Oberlaender, Marcel; Prohaska, Ste | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2011 Nov 9 | 16125-38 | 22072665 |
| Mitotic chromosome size scaling in Xenopus. | Kieserman, Esther K; Heald, Rebecca | Cell cycle (Georgetown, Tex.) | 2011 Nov 15 | 3863-70 | 22071695 |
| Zebrafish neurobiology: from development to circuit function and behaviour. | Engert, Florian; Wilson, Stephen W | Developmental neurobiology. | 2012 Mar; | 22058058 | |
| Sustained axon regeneration induced by co-deletion of PTEN and SOCS3. | Sun, Fang; Park, Kevin K; Belin, Stephane; Wang, Dongqing; Lu, Tao; Chen, Gang; Zhang, Kang; Yeung, Cecil; Feng, Guoping; Yankner, Bruce A; He, Zhigang | Nature | 2011 Dec 15 | 372-5 | 22056987 |
| In vivo quantitative evaluation of the transport kinetics of gold nanocages in a lymphatic system by noninvasive photoacoustic tomography. | Cai, Xin; Li, Weiyang; Kim, Chul-Hong; Yuan, Yuchen; Wang, Lihong V; Xia, Younan | ACS nano | 2011 Dec 27 | 9658-67 | 22054348 |
| Variations in the heme oxygenase-1 microsatellite polymorphism are associated with plasma CD14 and viral load in HIV-infected African-Americans. | Seu, L; Burt, T D; Witte, J S; Martin, J N; Deeks, S G; McCune, J M | Genes and immunity | 2012 Apr | 258-67 | 22048453 |
| Fitness landscape of antibiotic tolerance in Pseudomonas aeruginosa biofilms. | Amini, Sasan; Hottes, Alison K; Smith, Lincoln E; Tavazoie, Saeed | PLoS pathogens | 2011 Oct | e1002298 | 22028649 |
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| Proteostasis and REDOX state in the heart. | Christians, Elisabeth S; Benjamin, Ivor J | American journal of physiology. Heart and circulatory physiology | 2012 Jan 1 | H24-37 | 22003057 |
| Multiplexed quantification of nucleic acids with large dynamic range using multivolume digital RT-PCR on a rotational SlipChip tested with HIV and hepatitis C viral load. | Shen, Feng; Sun, Bing; Kreutz, Jason E; Davydova, Elena K; Du, Wenbin; Reddy, Poluru L; Joseph, Loren J; Ismagilov, Rustem F | Journal of the American Chemical Society | 2011 Nov 9 | 17705-12 | 21995644 |
| Characterization of genetic variation and natural selection at the arylamine N-acetyltransferase genes in global human populations. | Mortensen, Holly M; Froment, Alain; Lema, Godfrey; Bodo, Jean-Marie; Ibrahim, Muntaser; Nyambo, Thomas B; Omar, Sabah A; Tishkoff, Sarah A | Pharmacogenomics | 2011 Nov | 1545-58 | 21995608 |
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| Active tactile exploration using a brain-machine-brain interface. | O'Doherty, Joseph E; Lebedev, Mikhail A; Ifft, Peter J; Zhuang, Katie Z; Shokur, Solaiman; Bleuler, Hannes; Nicolelis, Miguel A L | Nature | 2011 Nov 10 | 228-31 | 21976021 |
| Early postmyocardial infarction survival in Murphy Roths Large mice is mediated by attenuated apoptosis and inflammation but depends on genetic background. | Hunt, Darlene L; Campbell, Patrick H; Zambon, Alexander C; Vranizan, Karen; Evans, Sylvia M; Kuo, Hai-Chien; Yamaguchi, Ken D; Omens, Jeffrey H; McCulloch, Andrew D | Experimental physiology | 2012 Jan | 102-14 | 21967898 |
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| Exploring weak, transient protein--protein interactions in crowded in vivo environments by in-cell nuclear magnetic resonance spectroscopy. | Wang, Qinghua; Zhuravleva, Anastasia; Gierasch, Lila M | Biochemistry | 2011 Nov 1 | 9225-36 | 21942871 |
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| Peroxisome proliferation-associated control of reactive oxygen species sets melanocortin tone and feeding in diet-induced obesity. | Diano, Sabrina; Liu, Zhong-Wu; Jeong, Jin Kwon; Dietrich, Marcelo O; Ruan, Hai-Bin; Kim, Esther; Suyama, Shigetomo; Kelly, Kaitlin; Gyengesi, Erika; Arbiser, Jack L; Belsham, Denise D; Sarruf, David A; Schwartz, Michael W; Bennett, Anton M; Shanabrough, M | Nature medicine | 2011 Sep | 1121-7 | 21873987 |
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| Benign rolandic epileptiform discharges are associated with mood and behavior problems. | Sarco, Dean P; Boyer, Katrina; Lundy-Krigbaum, Shannon M; Takeoka, Masanori; Jensen, Frances; Gregas, Matt; Waber, Deborah P | Epilepsy & behavior : E&B | 2011 Oct | 298-303 | 21862414 |
| Prolonged oxaliplatin exposure alters intracellular calcium signaling: a new mechanism to explain oxaliplatin-associated peripheral neuropathy. | Schulze, Christin; McGowan, Margit; Jordt, Sven-Eric; Ehrlich, Barbara E | Clinical colorectal cancer | 2011 Jun | 126-33 | 21859566 |
| Two alternating motor programs drive navigation in Drosophila larva. | Lahiri, Subhaneil; Shen, Konlin; Klein, Mason; Tang, Anji; Kane, Elizabeth; Gershow, Marc; Garrity, Paul; Samuel, Aravinthan D T | PloS one. | 2011; | 21858019 | |
| MicroRNAs can generate thresholds in target gene expression. | Mukherji, Shankar; Ebert, Margaret S; Zheng, Grace X Y; Tsang, John S; Sharp, Phillip A; van Oudenaarden, Alexander | Nature genetics | 2011 Sep | 854-9 | 21857679 |
| Interstitial contacts in an RNA-dependent RNA polymerase lattice. | Tellez, Andres B; Wang, Jing; Tanner, Elizabeth J; Spagnolo, Jeannie F; Kirkegaard, Karla; Bullitt, Esther | Journal of molecular biology | 2011 Sep 30 | 737-50 | 21839092 |
| Chemical genetics analysis of an aniline mustard anticancer agent reveals complex I of the electron transport chain as a target. | Fedeles, Bogdan I; Zhu, Angela Y; Young, Kellie S; Hillier, Shawn M; Proffitt, Kyle D; Essigmann, John M; Croy, Robert G | The Journal of biological chemistry. | 2011 Sep 30; | 33910-20 | 21832047 |
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| Targeted gene disruption in somatic zebrafish cells using engineered TALENs. | Sander, Jeffry D; Cade, Lindsay; Khayter, Cyd; Reyon, Deepak; Peterson, Randall T; Joung, J Keith; Yeh, Jing-Ruey J | Nature biotechnology | 2011 Aug | 697-8 | 21822241 |
| A resource for discovering specific and universal biomarkers for distributed stem cells. | Noh, Minsoo; Smith, Janet L; Huh, Yang Hoon; Sherley, James L | PloS one | 2011 | e22077 | 21818293 |
| Induction of stable drug resistance in human breast cancer cells using a combinatorial zinc finger transcription factor library. | Lee, Jeongeun; Hirsh, Andrew S; Wittner, Ben S; Maeder, Morgan L; Singavarapu, Rajasekhar; Lang, Magdalena; Janarthanan, Sailajah; McDermott, Ultan; Yajnik, Vijay; Ramaswamy, Sridhar; Joung, J Keith; Sgroi, Dennis C | PloS one | 2011 | e21112 | 21818254 |
| Impact of a stress-inducible switch to mutagenic repair of DNA breaks on mutation in Escherichia coli. | Shee, Chandan; Gibson, Janet L; Darrow, Michele C; Gonzalez, Caleb; Rosenberg, Susan M | Proceedings of the National Academy of Sciences of the United States of America | 2011 Aug 16 | 13659-64 | 21808005 |
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| What You Feel Influences What You See: The Role of Affective Feelings in Resolving Binocular Rivalry. | Anderson, Eric; Siegel, Erika H; Barrett, Lisa Feldman | Journal of experimental social psychology | 2011 Jul | 856-860 | 21789027 |
| Design and Implementation of Functional Nanoelectronic Interfaces With Biomolecules, Cells, and Tissue Using Nanowire Device Arrays. | Timko, Brian P; Cohen-Karni, Tzahi; Qing, Quan; Tian, Bozhi; Lieber, Charles M | IEEE transactions on nanotechnology | 2010 May | 269-280 | 21785576 |
| Bridging Token Identity Theory and Supervenience Theory Through Psychological Construction. | Barrett, Lisa Feldman | Psychological inquiry | 2011 Jan 1 | 115-127 | 21785534 |
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| Long-term stability of neural prosthetic control signals from silicon cortical arrays in rhesus macaque motor cortex. | Chestek, Cynthia A; Gilja, Vikash; Nuyujukian, Paul; Foster, Justin D; Fan, Joline M; Kaufman, Matthew T; Churchland, Mark M; Rivera-Alvidrez, Zuley; Cunningham, John P; Ryu, Stephen I; Shenoy, Krishna V | Journal of neural engineering | 2011 Aug | 045005 | 21775782 |
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| Quantitative dissection of the simple repression input-output function. | Garcia, Hernan G; Phillips, Rob | Proceedings of the National Academy of Sciences of the United States of America | 2011 Jul 19 | 12173-8 | 21730194 |
| Building enhancers from the ground up: a synthetic biology approach. | Amit, Roee; Garcia, Hernan G; Phillips, Rob; Fraser, Scott E | Cell | 2011 Jul 8 | 105-18 | 21729783 |
| Probing individual environmental bacteria for viruses by using microfluidic digital PCR. | Tadmor, Arbel D; Ottesen, Elizabeth A; Leadbetter, Jared R; Phillips, Rob | Science (New York, N.Y.) | 2011 Jul 1 | 58-62 | 21719670 |
| Immune activation, CD4+ T cell counts, and viremia exhibit oscillatory patterns over time in patients with highly resistant HIV infection. | Kitchen, Christina M R; Yeghiazarian, Lilit; Hoh, Rebecca; McCune, Joseph M; Sinclair, Elizabeth; Martin, Jeffrey N; Deeks, Steven G | PloS one | 2011 | e21190 | 21701594 |
| Modular realignment of entorhinal grid cell activity as a basis for hippocampal remapping. | Monaco, Joseph D; Abbott, L F; Abbott, Larry F | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2011 Jun 22; | 21697391 | |
| More effective nanomedicines through particle design. | Wang, Jin; Byrne, James D; Napier, Mary E; DeSimone, Joseph M | Small (Weinheim an der Bergstrasse, Germany) | 2011 Jul 18 | 1919-31 | 21695781 |
| Defining the computational structure of the motion detector in Drosophila. | Clark, Damon A; Bursztyn, Limor; Horowitz, Mark A; Schnitzer, Mark J; Clandinin, Thomas R | Neuron | 2011 Jun 23 | 1165-77 | 21689602 |
| Fabrication of Density Gradients of Biodegradable Polymer Microparticles and Their Use in Guiding Neurite Outgrowth. | Li, Xiaoran; Macewan, Matthew R; Xie Dr, Jingwei; Siewe, Daku; Yuan, Xiaoyan; Xia, Younan | Advanced functional materials | 2010 May 25 | 1632-1637 | 21687818 |
| Combining Computational Fluid Dynamics and Agent-Based Modeling: a new approach to evacuation planning. | Epstein, Joshua M; Pankajakshan, Ramesh; Hammond, Ross A | PloS one | 2011 | e20139 | 21687788 |
| Denoising two-photon calcium imaging data. | Malik, Wasim Q; Schummers, James; Sur, Mriganka; Brown, Emery N | PloS one | 2011 | e20490 | 21687727 |
| Physical Module Networks: an integrative approach for reconstructing transcription regulation. | Novershtern, Noa; Regev, Aviv; Friedman, Nir | Bioinformatics (Oxford, England) | 2011 Jul 1 | i177-85 | 21685068 |
| Noninvasive photoacoustic microscopy of living cells in two and three dimensions through enhancement by a metabolite dye. | Zhang, Yu; Cai, Xin; Wang, Yu; Zhang, Chi; Li, Li; Choi, Sung-Wook; Wang, Lihong V; Xia, Younan | Angewandte Chemie (International ed. in English) | 2011 Aug 1 | 7359-63 | 21681876 |
| Breaking free of sample size dogma to perform innovative translational research. | Bacchetti, Peter; Deeks, Steven G; McCune, Joseph M | Science translational medicine | 2011 Jun 15 | 87ps24 | 21677197 |
| Quality metrics to accompany spike sorting of extracellular signals. | Hill, Daniel N; Mehta, Samar B; Kleinfeld, David | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2011 Jun 15; | 8699-705 | 21677152 |
| Integration of cell-free protein coexpression with an enzyme-linked immunosorbent assay enables rapid analysis of protein-protein interactions directly from DNA. | Layton, Curtis J; Hellinga, Homme W | Protein science : a publication of the Protein Society | 2011 Aug | 1432-8 | 21674663 |
| Gold Nanopyramids Assembled into High-Order Stacks Exhibit Increased SERS Response. | Stoerzinger, Kelsey A; Hasan, Warefta; Lin, Julia Y; Robles, Alex; Odom, Teri W | The journal of physical chemistry letters | 2010 Apr 1 | 1046-1050 | 21666758 |
| Effects of natural selection and gene conversion on the evolution of human glycophorins coding for MNS blood polymorphisms in malaria-endemic African populations. | Ko, Wen-Ya; Kaercher, Kristin A; Giombini, Emanuela; Marcatili, Paolo; Froment, Alain; Ibrahim, Muntaser; Lema, Godfrey; Nyambo, Thomas B; Omar, Sabah A; Wambebe, Charles; Ranciaro, Alessia; Hirbo, Jibril B; Tishkoff, Sarah A | American journal of human genetics | 2011 Jun 10 | 741-54 | 21664997 |
| Pluripotency factors in embryonic stem cells regulate differentiation into germ layers. | Thomson, Matt; Liu, Siyuan John; Zou, Ling-Nan; Smith, Zack; Meissner, Alexander; Ramanathan, Sharad | Cell. | 2011 Jun 10; | 21663792 | |
| The human brain in a dish: the promise of iPSC-derived neurons. | Dolmetsch, Ricardo; Geschwind, Daniel H | Cell | 2011 Jun 10 | 831-4 | 21663789 |
| Nicotine decreases food intake through activation of POMC neurons. | Mineur, Yann S; Abizaid, Alfonso; Rao, Yan; Salas, Ramiro; DiLeone, Ralph J; Gundisch, Daniela; Diano, Sabrina; De Biasi, Mariella; Horvath, Tamas L; Gao, Xiao-Bing; Picciotto, Marina R | Science (New York, N.Y.) | 2011 Jun 10 | 1330-2 | 21659607 |
| Neuroblast migration along the anteroposterior axis of C. elegans is controlled by opposing gradients of Wnts and a secreted Frizzled-related protein. | Harterink, Martin; Kim, Dong Hyun; Middelkoop, Teije C; Doan, Thang Dinh; van Oudenaarden, Alexander; Korswagen, Hendrik C | Development (Cambridge, England) | 2011 Jul | 2915-24 | 21653614 |
| The effect of mutations on the alloreactive T cell receptor/peptide-MHC interface structure: a molecular dynamics study. | Wolfson, Mikhail Y; Nam, Kwangho; Chakraborty, Arup K | The journal of physical chemistry. B | 2011 Jun 30 | 8317-27 | 21651302 |
| Risk as Social Context: Immigration Policy and Autism in California. | Fountain, Christine; Bearman, Peter | Sociological forum (Randolph, N.J.) | 2011 Jun 1 | 215-240 | 21643443 |
| High-fat feeding promotes obesity via insulin receptor/PI3K-dependent inhibition of SF-1 VMH neurons. | Klockener, Tim; Hess, Simon; Belgardt, Bengt F; Paeger, Lars; Verhagen, Linda A W; Husch, Andreas; Sohn, Jong-Woo; Hampel, Brigitte; Dhillon, Harveen; Zigman, Jeffrey M; Lowell, Bradford B; Williams, Kevin W; Elmquist, Joel K; Horvath, Tamas L; Kloppenbur | Nature neuroscience | 2011 Jul | 911-8 | 21642975 |
| Reconstitution of contractile actomyosin bundles. | Thoresen, Todd; Lenz, Martin; Gardel, Margaret L | Biophysical journal | 2011 Jun 8 | 2698-705 | 21641315 |
| Zinc-finger nucleases for somatic gene therapy: the next frontier. | Rahman, Shamim H; Maeder, Morgan L; Joung, J Keith; Cathomen, Toni | Human gene therapy | 2011 Aug | 925-33 | 21631241 |
| The clinically available NMDA receptor antagonist, memantine, exhibits relative safety in the developing rat brain. | Manning, Simon M; Boll, Griffin; Fitzgerald, Erin; Selip, Debra B; Volpe, Joseph J; Jensen, Frances E | International journal of developmental neuroscience : the official journal of the International Society for Developmental Neuroscience. | 2011 Nov; | 767-73 | 21624454 |
| Silicon-Neuron Design: A Dynamical Systems Approach. | Arthur, John V; Boahen, Kwabena | IEEE transactions on circuits and systems. I, Regular papers : a publication of the IEEE Circuits and Systems Society | 2011 | 1034-1043 | 21617741 |
| The visual impact of gossip. | Anderson, Eric; Siegel, Erika H; Bliss-Moreau, Eliza; Barrett, Lisa Feldman | Science (New York, N.Y.) | 2011 Jun 17 | 1446-8 | 21596956 |
| Involvement of adenosine A2A receptors in engulfment-dependent apoptotic cell suppression of inflammation. | Koroskenyi, Krisztina; Duro, Edina; Pallai, Anna; Sarang, Zsolt; Kloor, Doris; Ucker, David S; Beceiro, Susana; Castrillo, Antonio; Chawla, Ajay; Ledent, Catherine A; Fesus, Laszlo; Szondy, Zsuzsa | Journal of immunology (Baltimore, Md. : 1950) | 2011 Jun 15 | 7144-55 | 21593381 |
| Full-length transcriptome assembly from RNA-Seq data without a reference genome. | Grabherr, Manfred G; Haas, Brian J; Yassour, Moran; Levin, Joshua Z; Thompson, Dawn A; Amit, Ido; Adiconis, Xian; Fan, Lin; Raychowdhury, Raktima; Zeng, Qiandong; Chen, Zehua; Mauceli, Evan; Hacohen, Nir; Gnirke, Andreas; Rhind, Nicholas; di Palma, Federi | Nature biotechnology | 2011 Jul | 644-52 | 21572440 |
| Numb links extracellular cues to intracellular polarity machinery to promote chemotaxis. | Zhou, Pengcheng; Alfaro, Jose; Chang, Eun Hyuk; Zhao, Xuesong; Porcionatto, Marimelia; Segal, Rosalind A | Developmental cell | 2011 May 17 | 610-22 | 21571219 |
| Metabolite-enabled eradication of bacterial persisters by aminoglycosides. | Allison, Kyle R; Brynildsen, Mark P; Collins, James J | Nature | 2011 May 12 | 216-20 | 21562562 |
| A guide to delineate the logic of neurovascular signaling in the brain. | Kleinfeld, David; Blinder, Pablo; Drew, Patrick J; Driscoll, Jonathan D; Muller, Arnaud; Tsai, Philbert S; Shih, Andy Y | Frontiers in neuroenergetics | 2011 | 1 | 21559095 |
| Tracking brain states under general anesthesia by using global coherence analysis. | Cimenser, Aylin; Purdon, Patrick L; Pierce, Eric T; Walsh, John L; Salazar-Gomez, Andres F; Harrell, Priscilla G; Tavares-Stoeckel, Casie; Habeeb, Kathleen; Brown, Emery N | Proceedings of the National Academy of Sciences of the United States of America | 2011 May 24 | 8832-7 | 21555565 |
| Shear thickening of F-actin networks crosslinked with non-muscle myosin IIB. | Norstrom, Melanie; Gardel, Margaret L | Soft matter | 2011 Jan 1 | 3228-3233 | 21552431 |
| Socioeconomic Status and the Increased Prevalence of Autism in California. | King, Marissa D; Bearman, Peter S | American sociological review | 2011 Apr 1 | 320-346 | 21547238 |
| Generation of hot spots with silver nanocubes for single-molecule detection by surface-enhanced Raman scattering. | Rycenga, Matthew; Xia, Xiaohu; Moran, Christine H; Zhou, Fei; Qin, Dong; Li, Zhi-Yuan; Xia, Younan | Angewandte Chemie (International ed. in English) | 2011 Jun 6 | 5473-7 | 21542081 |
| Fluctuating and sensory-induced vasodynamics in rodent cortex extend arteriole capacity. | Drew, Patrick J; Shih, Andy Y; Kleinfeld, David | Proceedings of the National Academy of Sciences of the United States of America | 2011 May 17 | 8473-8 | 21536897 |
| Macromolecular crowding fails to fold a globular protein in cells. | Schlesinger, Alexander P; Wang, Yaqiang; Tadeo, Xavier; Millet, Oscar; Pielak, Gary J | Journal of the American Chemical Society | 2011 Jun 1 | 8082-5 | 21534566 |
| Gold nanocages: from synthesis to theranostic applications. | Xia, Younan; Li, Weiyang; Cobley, Claire M; Chen, Jingyi; Xia, Xiaohu; Zhang, Qiang; Yang, Miaoxin; Cho, Eun Chul; Brown, Paige K | Accounts of chemical research | 2011 Oct 18 | 914-24 | 21528889 |
| The effect of sedimentation and diffusion on cellular uptake of gold nanoparticles. | Cho, Eun Chul; Zhang, Qiang; Xia, Younan | Nature nanotechnology | 2011 Jun | 385-91 | 21516092 |
| Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells. | Rabani, Michal; Levin, Joshua Z; Fan, Lin; Adiconis, Xian; Raychowdhury, Raktima; Garber, Manuel; Gnirke, Andreas; Nusbaum, Chad; Hacohen, Nir; Friedman, Nir; Amit, Ido; Regev, Aviv | Nature biotechnology | 2011 May | 436-42 | 21516085 |
| General anesthesia and altered states of arousal: a systems neuroscience analysis. | Brown, Emery N; Purdon, Patrick L; Van Dort, Christa J | Annual review of neuroscience | 2011 | 601-28 | 21513454 |
| Comparative functional genomics of the fission yeasts. | Rhind, Nicholas; Chen, Zehua; Yassour, Moran; Thompson, Dawn A; Haas, Brian J; Habib, Naomi; Wapinski, Ilan; Roy, Sushmita; Lin, Michael F; Heiman, David I; Young, Sarah K; Furuya, Kanji; Guo, Yabin; Pidoux, Alison; Chen, Huei Mei; Robbertse, Barbara; Gol | Science (New York, N.Y.) | 2011 May 20 | 930-6 | 21511999 |
| Assessment of cardio-respiratory interactions in preterm infants by bivariate autoregressive modeling and surrogate data analysis. | Indic, Premananda; Bloch-Salisbury, Elisabeth; Bednarek, Frank; Brown, Emery N; Paydarfar, David; Barbieri, Riccardo | Early human development | 2011 Jul | 477-87 | 21511413 |
| Reporting from the field: genetically encoded fluorescent reporters uncover signaling dynamics in living biological systems. | Mehta, Sohum; Zhang, Jin | Annual review of biochemistry | 2011 | 375-401 | 21495849 |
| Inverse Medea as a novel gene drive system for local population replacement: a theoretical analysis. | Marshall, John M; Hay, Bruce A | The Journal of heredity | 2011 May-Jun | 336-41 | 21493596 |
| Genes methylated by DNA methyltransferase 3b are similar in mouse intestine and human colon cancer. | Steine, Eveline J; Ehrich, Mathias; Bell, George W; Raj, Arjun; Reddy, Seshamma; van Oudenaarden, Alexander; Jaenisch, Rudolf; Linhart, Heinz G | The Journal of clinical investigation | 2011 May | 1748-52 | 21490393 |
| Static and dynamic autonomic response with increasing nausea perception. | LaCount, Lauren T; Barbieri, Riccardo; Park, Kyungmo; Kim, Jieun; Brown, Emery N; Kuo, Braden; Napadow, Vitaly | Aviation, space, and environmental medicine. | 2011 Apr; | 21485400 | |