NIH Director's Pioneer Award Program (2309)
Publication TitleAuthorsJournalPublication DatePage NoPubMedID
Q&A: Cellular near death experiences-what is anastasis?Sun, Gongping; Montell, Denise JBMC biology.2017 Oct 24;29065871
Expansion Mini-Microscopy: An Enabling Alternative in Point-of-Care Diagnostics.Zhang, Yu Shrike; Santiago, Grissel Trujillo-de; Alvarez, Mario Moisés; Schiff, Steven J; Boyden, Edward S; Khademhosseini, AliCurrent opinion in biomedical engineering.2017 Mar;29062977
Whispering-gallery-mode emission from biological luminescent protein microcavity assemblies.Humar, Matja?; Yun, Seok HyunOptica.2017;29046889
Overproduction of Neurons Is Correlated with Enhanced Cortical Ensembles and Increased Perceptual Discrimination.Fang, Wei-Qun; Yuste, RafaelCell reports.2017 Oct 10;29020625
Solution-phase and solid-phase sequential, selective modification of side chains in KDYWEC and KDYWE as models for usage in single-molecule protein sequencing.Hernandez, Erik T; Swaminathan, Jagannath; Marcotte, Edward M; Anslyn, Eric VNew journal of chemistry = Nouveau journal de chimie.2017 Jan 21;28983186
Nkx2.5+?Cardiomyoblasts Contribute to Cardiomyogenesis in the Neonatal Heart.Serpooshan, Vahid; Liu, Yuan-Hung; Buikema, Jan W; Galdos, Francisco X; Chirikian, Orlando; Paige, Sharon; Venkatraman, Sneha; Kumar, Anusha; Rawnsley, David R; Huang, Xiaojing; Pijnappels, Daniël A; Wu, Sean MScientific reports.2017 Oct 03;28974782
Sensitivity of reentrant driver localization to electrophysiological parameter variability in image-based computational models of persistent atrial fibrillation sustained by a fibrotic substrate.Deng, Dongdong; Murphy, Michael J; Hakim, Joe B; Franceschi, William H; Zahid, Sohail; Pashakhanloo, Farhad; Trayanova, Natalia A; Boyle, Patrick MChaos (Woodbury, N.Y.).2017 Sep;28964164
Closed-Loop Real-Time Imaging Enables Fully Automated Cell-Targeted Patch-Clamp Neural Recording In Vivo.Suk, Ho-Jun; van Welie, Ingrid; Kodandaramaiah, Suhasa B; Allen, Brian; Forest, Craig R; Boyden, Edward SNeuron.2017 Sep 27;28957673
From structure to function, how bioinformatics help to reveal functions of our genomes.Zheng, Xiaoqi; Zhong, ShengGenome biology.2017 Sep 26;28950915
Toward a conceptual framework for early brain and behavior development in autism.Piven, J; Elison, J T; Zylka, M JMolecular psychiatry.2017 Oct;28937691
Enhanced Nociception in Angelman Syndrome Model Mice.McCoy, Eric S; Taylor-Blake, Bonnie; Aita, Megumi; Simon, Jeremy M; Philpot, Benjamin D; Zylka, Mark JThe Journal of neuroscience : the official journal of the Society for Neuroscience.2017 Oct 18;28931574
Metabolic crosstalk regulates Porphyromonas gingivalis colonization and virulence during oral polymicrobial infection.Kuboniwa, Masae; Houser, John R; Hendrickson, Erik L; Wang, Qian; Alghamdi, Samar A; Sakanaka, Akito; Miller, Daniel P; Hutcherson, Justin A; Wang, Tiansong; Beck, David A C; Whiteley, Marvin; Amano, Atsuo; Wang, Huizhi; Marcotte, Edward M; Hackett, Murray; Lamont, Richard JNature microbiology.2017 Nov;28924191
mTOR Inhibition Restores Amino Acid Balance in Cells Dependent on Catabolism of Extracellular Protein.Nofal, Michel; Zhang, Kevin; Han, Seunghun; Rabinowitz, Joshua DMolecular cell.2017 Sep 21;28918901
SAM-dependent enzyme-catalysed pericyclic reactions in natural product biosynthesis.Ohashi, Masao; Liu, Fang; Hai, Yang; Chen, Mengbin; Tang, Man-Cheng; Yang, Zhongyue; Sato, Michio; Watanabe, Kenji; Houk, K N; Tang, YiNature.2017 Sep 28;28902839
Machine Learning Analysis Identifies Drosophila Grunge/Atrophin as an Important Learning and Memory Gene Required for Memory Retention and Social Learning.Kacsoh, Balint Z; Greene, Casey S; Bosco, GiovanniG3 (Bethesda, Md.).2017 Nov 06;28889104
Variant Interpretation: Functional Assays to the Rescue.Starita, Lea M; Ahituv, Nadav; Dunham, Maitreya J; Kitzman, Jacob O; Roth, Frederick P; Seelig, Georg; Shendure, Jay; Fowler, Douglas MAmerican journal of human genetics.2017 Sep 07;28886340
Closed-Loop Real-Time Imaging Enables Fully Automated Cell-Targeted Patch-Clamp Neural Recording In Vivo.Suk, Ho-Jun; van Welie, Ingrid; Kodandaramaiah, Suhasa B; Allen, Brian; Forest, Craig R; Boyden, Edward SNeuron.2017 Aug 30;28858614
Comprehensive single-cell transcriptional profiling of a multicellular organism.Cao, Junyue; Packer, Jonathan S; Ramani, Vijay; Cusanovich, Darren A; Huynh, Chau; Daza, Riza; Qiu, Xiaojie; Lee, Choli; Furlan, Scott N; Steemers, Frank J; Adey, Andrew; Waterston, Robert H; Trapnell, Cole; Shendure, JayScience (New York, N.Y.).2017 08 18;28818938
Sonofragmentation of Ultrathin 1D Nanomaterials.Gao, Ruixuan; Gupta, Ishan; Boyden, Edward SParticle & particle systems characterization : measurement and description of particle properties and behavior in powders and other disperse systems.2017 Jan;28804214
Distinct Cellular Mechanisms Underlie Anti-CTLA-4 and Anti-PD-1 Checkpoint Blockade.Wei, Spencer C; Levine, Jacob H; Cogdill, Alexandria P; Zhao, Yang; Anang, Nana-Ama A S; Andrews, Miles C; Sharma, Padmanee; Wang, Jing; Wargo, Jennifer A; Pe'er, Dana; Allison, James PCell.2017 Sep 07;28803728
A molecular signature for anastasis, recovery from the brink of apoptotic cell death.Sun, Gongping; Guzman, Elmer; Balasanyan, Varuzhan; Conner, Christopher M; Wong, Kirsten; Zhou, Hongjun Robin; Kosik, Kenneth S; Montell, Denise JThe Journal of cell biology.2017 Oct 02;28768686
Neuronal Stimulation Triggers Neuronal Glycolysis and Not Lactate Uptake.Díaz-García, Carlos Manlio; Mongeon, Rebecca; Lahmann, Carolina; Koveal, Dorothy; Zucker, Hannah; Yellen, GaryCell metabolism.2017 Aug 01;28768175
Targeted DNA methylation in human cells using engineered dCas9-methyltransferases.Xiong, Tina; Meister, Glenna E; Workman, Rachael E; Kato, Nathaniel C; Spellberg, Michael J; Turker, Fulya; Timp, Winston; Ostermeier, Marc; Novina, Carl DScientific reports.2017 Jul 27;28751638
Gene expression signatures of human cell and tissue longevity.Seim, Inge; Ma, Siming; Gladyshev, Vadim NNPJ aging and mechanisms of disease.2016;28721269
Nanoscale imaging of clinical specimens using pathology-optimized expansion microscopy.Zhao, Yongxin; Bucur, Octavian; Irshad, Humayun; Chen, Fei; Weins, Astrid; Stancu, Andreea L; Oh, Eun-Young; DiStasio, Marcello; Torous, Vanda; Glass, Benjamin; Stillman, Isaac E; Schnitt, Stuart J; Beck, Andrew H; Boyden, Edward SNature biotechnology.2017 Aug;28714966
Neural Circuit-Specialized Astrocytes: Transcriptomic, Proteomic, Morphological, and Functional Evidence.Chai, Hua; Diaz-Castro, Blanca; Shigetomi, Eiji; Monte, Emma; Octeau, J Christopher; Yu, Xinzhu; Cohn, Whitaker; Rajendran, Pradeep S; Vondriska, Thomas M; Whitelegge, Julian P; Coppola, Giovanni; Khakh, Baljit SNeuron.2017 Jul 11;28712653
CRISPR/Cas9-Mediated Scanning for Regulatory Elements Required for HPRT1 Expression via Thousands of Large, Programmed Genomic Deletions.Gasperini, Molly; Findlay, Gregory M; McKenna, Aaron; Milbank, Jennifer H; Lee, Choli; Zhang, Melissa D; Cusanovich, Darren A; Shendure, JayAmerican journal of human genetics.2017 Aug 03;28712454
Quantitative real-time imaging of glutathione.Jiang, Xiqian; Chen, Jianwei; Baji?, Aleksandar; Zhang, Chengwei; Song, Xianzhou; Carroll, Shaina L; Cai, Zhao-Lin; Tang, Meiling; Xue, Mingshan; Cheng, Ninghui; Schaaf, Christian P; Li, Feng; MacKenzie, Kevin R; Ferreon, Allan Chris M; Xia, Fan; Wang, MeNature communications.2017 Jul 13;28703127
Thermoneutrality but not UCP1 Deficiency Suppresses Monocyte Mobilization into Blood.Williams, Jesse W; Elvington, Andrew F; Ivanov, Stoyan; Kessler, Skyler; Luehmann, Hannah; Baba, Osamu; Saunders, Brian T; Kim, Ki-Wook; Johnson, Michael W; Craft, Clarissa S; Choi, Jae-Hoon; Sorci-Thomas, Mary G; Zinselmeyer, Bernd H; Brestoff, Jonathan Circulation research.2017 Jul 10;28696252
Imaging-Based Simulations for Predicting Sudden Death and Guiding Ventricular Tachycardia Ablation.Trayanova, Natalia A; Pashakhanloo, Farhad; Wu, Katherine C; Halperin, Henry RCirculation. Arrhythmia and electrophysiology.2017 Jul;28696219
Spectral reading of optical resonance-encoded cells in microfluidics.Humar, Matja?; Upadhya, Avinash; Yun, Seok HyunLab on a chip.2017 Aug 08;28686280
Reversible Product Release and Recapture by a Fungal Polyketide Synthase Using a Carnitine Acyltransferase Domain.Hang, Leibniz; Tang, Man-Cheng; Harvey, Colin J B; Page, Claire G; Li, Jian; Hung, Yiu-Sun; Liu, Nicholas; Hillenmeyer, Maureen E; Tang, YiAngewandte Chemie (International ed. in English).2017 Aug 01;28679030
Systematic bacterialization of yeast genes identifies a near-universally swappable pathway.Kachroo, Aashiq H; Laurent, Jon M; Akhmetov, Azat; Szilagyi-Jones, Madelyn; McWhite, Claire D; Zhao, Alice; Marcotte, Edward MeLife.2017 Jun 29;28661399
Reliable and Elastic Propagation of Cortical Seizures In Vivo.Wenzel, Michael; Hamm, Jordan P; Peterka, Darcy S; Yuste, RafaelCell reports.2017 Jun 27;28658617
Metabolite Measurement: Pitfalls to Avoid and Practices to Follow.Lu, Wenyun; Su, Xiaoyang; Klein, Matthias S; Lewis, Ian A; Fiehn, Oliver; Rabinowitz, Joshua DAnnual review of biochemistry.2017 Jun 20;28654323
Model-based spike sorting with a mixture of drifting t-distributions.Shan, Kevin Q; Lubenov, Evgueniy V; Siapas, Athanassios GJournal of neuroscience methods.2017 Aug 15;28652008
The relationship between cardiac endothelium and fibroblasts: it's complicated.Karra, Ravi; Walter, Agoston O; Wu, Sean MThe Journal of clinical investigation.2017 Aug 01;28650344
Light in diagnosis, therapy and surgery.Yun, Seok Hyun; Kwok, Sheldon J JNature biomedical engineering.2017;28649464
An efficient methodology to introduce o-(aminomethyl)phenyl-boronic acids into peptides: alkylation of secondary amines.Hernandez, Erik T; Kolesnichenko, Igor V; Reuther, James F; Anslyn, Eric VNew journal of chemistry = Nouveau journal de chimie.2017 Jan 07;28649175
Microbial Genetic Composition Tunes Host Longevity.Han, Bing; Sivaramakrishnan, Priya; Lin, Chih-Chun J; Neve, Isaiah A A; He, Jingquan; Tay, Li Wei Rachel; Sowa, Jessica N; Sizovs, Antons; Du, Guangwei; Wang, Jin; Herman, Christophe; Wang, Meng CCell.2017 Jun 15;28622510
Identification and Heterologous Production of a Benzoyl-Primed Tricarboxylic Acid Polyketide Intermediate from the Zaragozic Acid A Biosynthetic Pathway.Liu, Nicholas; Hung, Yiu-Sun; Gao, Shu-Shan; Hang, Leibniz; Zou, Yi; Chooi, Yit-Heng; Tang, YiOrganic letters.2017 Jul 07;28605916
Biodegradable Polyphosphazene-Based Blends for Regenerative Engineering.Ogueri, Kenneth S; Escobar Ivirico, Jorge L; Nair, Lakshmi S; Allcock, Harry R; Laurencin, Cato TRegenerative engineering and translational medicine.2017 Mar;28596987
Integration of over 9,000 mass spectrometry experiments builds a global map of human protein complexes.Drew, Kevin; Lee, Chanjae; Huizar, Ryan L; Tu, Fan; Borgeson, Blake; McWhite, Claire D; Ma, Yun; Wallingford, John B; Marcotte, Edward MMolecular systems biology.2017 Jun 08;28596423
Evaluating Public Health Interventions: 6. Modeling Ratios or Differences? Let the Data Tell Us.Spiegelman, Donna; VanderWeele, Tyler JAmerican journal of public health.2017 Jul;28590865
Unravelling and Exploiting Astrocyte Dysfunction in Huntington's Disease.Khakh, Baljit S; Beaumont, Vahri; Cachope, Roger; Munoz-Sanjuan, Ignacio; Goldman, Steven A; Grantyn, RosemarieTrends in neurosciences.2017 Jul;28578789
Noninvasive Deep Brain Stimulation via Temporally Interfering Electric Fields.Grossman, Nir; Bono, David; Dedic, Nina; Kodandaramaiah, Suhasa B; Rudenko, Andrii; Suk, Ho-Jun; Cassara, Antonino M; Neufeld, Esra; Kuster, Niels; Tsai, Li-Huei; Pascual-Leone, Alvaro; Boyden, Edward SCell.2017 Jun 01;28575667
Mesoscale-duration activated states gate spiking in response to fast rises in membrane voltage in the awake brain.Singer, Annabelle C; Talei Franzesi, Giovanni; Kodandaramaiah, Suhasa B; Flores, Francisco J; Cohen, Jeremy D; Lee, Albert K; Börgers, Christoph; Forest, Craig R; Kopell, Nancy J; Boyden, Edward SJournal of neurophysiology.2017 May 31;28566460
The autism-linked UBE3A T485A mutant E3 ubiquitin ligase activates the Wnt/?-catenin pathway by inhibiting the proteasome.Yi, Jason J; Paranjape, Smita R; Walker, Matthew P; Choudhury, Rajarshi; Wolter, Justin M; Fragola, Giulia; Emanuele, Michael J; Major, Michael B; Zylka, Mark JThe Journal of biological chemistry.2017 May 30;28559284
A Polecat's View of Patrolling Monocytes.Williams, Jesse W; Randolph, Gwendalyn J; Zinselmeyer, Bernd HCirculation research.2017 May 26;28546349
Systems-wide Studies Uncover Commander, a Multiprotein Complex Essential to Human Development.Mallam, Anna L; Marcotte, Edward MCell systems.2017 May 24;28544880
An American Crisis: the Lack of Black Men in Medicine.Laurencin, Cato T; Murray, MarshaJournal of racial and ethnic health disparities.2017 Jun;28534304
Coordinated and Iterative Enzyme Catalysis in Fungal Polyketide Biosynthesis.Hang, Leibniz; Liu, Nicholas; Tang, YiACS catalysis.2016 Sep 02;28529817
CaMKII Autophosphorylation Is Necessary for Optimal Integration of Ca(2+) Signals during LTP Induction, but Not Maintenance.Chang, Jui-Yun; Parra-Bueno, Paula; Laviv, Tal; Szatmari, Erzsebet M; Lee, Seok-Jin R; Yasuda, RyoheiNeuron.2017 May 17;28521133
Mechanism of the P450-Catalyzed Oxidative Cyclization in the Biosynthesis of Griseofulvin.Grandner, Jessica M; Cacho, Ralph A; Tang, Yi; Houk, K NACS catalysis.2016 Jul 01;28503354
Extraction and quantitation of NAD(P)(H).Lu, Wenyun; Wang, Lin; Chen, Li; Hui, Sheng; Rabinowitz, Joshua DAntioxidants & redox signaling.2017 May 12;28497978
Immunological implications of pregnancy-induced microchimerism.Kinder, Jeremy M; Stelzer, Ina A; Arck, Petra C; Way, Sing SingNature reviews. Immunology.2017 Aug;28480895
Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses.Lavin, Yonit; Kobayashi, Soma; Leader, Andrew; Amir, El-Ad David; Elefant, Naama; Bigenwald, Camille; Remark, Romain; Sweeney, Robert; Becker, Christian D; Levine, Jacob H; Meinhof, Klaus; Chow, Andrew; Kim-Shulze, Seunghee; Wolf, Andrea; Medaglia, ChiaraCell.2017 May 04;28475900
An Immune Atlas of Clear Cell Renal Cell Carcinoma.Chevrier, Stéphane; Levine, Jacob Harrison; Zanotelli, Vito Riccardo Tomaso; Silina, Karina; Schulz, Daniel; Bacac, Marina; Ries, Carola Hermine; Ailles, Laurie; Jewett, Michael Alexander Spencer; Moch, Holger; van den Broek, Maries; Beisel, Christian; StCell.2017 May 04;28475899
Nucleotide-time alignment for molecular recorders.Cybulski, Thaddeus R; Boyden, Edward S; Church, George M; Tyo, Keith E J; Kording, Konrad PPLoS computational biology.2017 May;28459860
Cell diversity and network dynamics in photosensitive human brain organoids.Quadrato, Giorgia; Nguyen, Tuan; Macosko, Evan Z; Sherwood, John L; Min Yang, Sung; Berger, Daniel R; Maria, Natalie; Scholvin, Jorg; Goldman, Melissa; Kinney, Justin P; Boyden, Edward S; Lichtman, Jeff W; Williams, Ziv M; McCarroll, Steven A; Arlotta, PaolaNature.2017 May 04;28445462
Microbial metabolites regulate host lipid metabolism through NR5A-Hedgehog signalling.Lin, Chih-Chun Janet; Wang, Meng CNature cell biology.2017 May;28436966
rAMPing Up Stress Signaling: Protein AMPylation in Metazoans.Truttmann, Matthias C; Ploegh, Hidde LTrends in cell biology.2017 Apr 19;28433487
Engineering genetic circuit interactions within and between synthetic minimal cells.Adamala, Katarzyna P; Martin-Alarcon, Daniel A; Guthrie-Honea, Katriona R; Boyden, Edward SNature chemistry.2017 May;28430194
Super-multiplex vibrational imaging.Wei, Lu; Chen, Zhixing; Shi, Lixue; Long, Rong; Anzalone, Andrew V; Zhang, Luyuan; Hu, Fanghao; Yuste, Rafael; Cornish, Virginia W; Min, WeiNature.2017 Apr 27;28424513
Human umbilical cord plasma proteins revitalize hippocampal function in aged mice.Castellano, Joseph M; Mosher, Kira I; Abbey, Rachelle J; McBride, Alisha A; James, Michelle L; Berdnik, Daniela; Shen, Jadon C; Zou, Bende; Xie, Xinmin S; Tingle, Martha; Hinkson, Izumi V; Angst, Martin S; Wyss-Coray, TonyNature.2017 04 27;28424512
Iterative expansion microscopy.Chang, Jae-Byum; Chen, Fei; Yoon, Young-Gyu; Jung, Erica E; Babcock, Hazen; Kang, Jeong Seuk; Asano, Shoh; Suk, Ho-Jun; Pak, Nikita; Tillberg, Paul W; Wassie, Asmamaw T; Cai, Dawen; Boyden, Edward SNature methods.2017 Jun;28417997
Blood-Brain Barrier Permeability Is Regulated by Lipid Transport-Dependent Suppression of Caveolae-Mediated Transcytosis.Andreone, Benjamin J; Chow, Brian Wai; Tata, Aleksandra; Lacoste, Baptiste; Ben-Zvi, Ayal; Bullock, Kevin; Deik, Amy A; Ginty, David D; Clish, Clary B; Gu, ChenghuaNeuron.2017 Apr 11;28416077
Nucleic acid detection with CRISPR-Cas13a/C2c2.Gootenberg, Jonathan S; Abudayyeh, Omar O; Lee, Jeong Wook; Essletzbichler, Patrick; Dy, Aaron J; Joung, Julia; Verdine, Vanessa; Donghia, Nina; Daringer, Nichole M; Freije, Catherine A; Myhrvold, Cameron; Bhattacharyya, Roby P; Livny, Jonathan; Regev, Aviv; Koonin, Eugene V; Hung, Deborah T; Sabeti, Pardis C; Collins, James J; Zhang, FengScience (New York, N.Y.).2017 Apr 28;28408723
Single-cell whole-genome analyses by Linear Amplification via Transposon Insertion (LIANTI).Chen, Chongyi; Xing, Dong; Tan, Longzhi; Li, Heng; Zhou, Guangyu; Huang, Lei; Xie, X SunneyScience (New York, N.Y.).2017 Apr 14;28408603
Chd8 Mutation Leads to Autistic-like Behaviors and Impaired Striatal Circuits.Platt, Randall J; Zhou, Yang; Slaymaker, Ian M; Shetty, Ashwin S; Weisbach, Niels R; Kim, Jin-Ah; Sharma, Jitendra; Desai, Mitul; Sood, Sabina; Kempton, Hannah R; Crabtree, Gerald R; Feng, Guoping; Zhang, FengCell reports.2017 Apr 11;28402856
The impact of common dopamine D2 receptor gene polymorphisms on D2/3 receptor availability: C957T as a key determinant in putamen and ventral striatum.Smith, C T; Dang, L C; Buckholtz, J W; Tetreault, A M; Cowan, R L; Kessler, R M; Zald, D HTranslational psychiatry.2017 Apr 11;28398340
Taking Stock of Retinal Gene Therapy: Looking Back and Moving Forward.Bennett, JeanMolecular therapy : the journal of the American Society of Gene Therapy.2017 May 03;28391961
Contractile force generation by 3D hiPSC-derived cardiac tissues is enhanced by rapid establishment of cellular interconnection in matrix with muscle-mimicking stiffness.Lee, Soah; Serpooshan, Vahid; Tong, Xinming; Venkatraman, Sneha; Lee, Meelim; Lee, Jaecheol; Chirikian, Orlando; Wu, Joseph C; Wu, Sean M; Yang, FanBiomaterials.2017 Jul;28384492
Altered Cortical Ensembles in Mouse Models of Schizophrenia.Hamm, Jordan P; Peterka, Darcy S; Gogos, Joseph A; Yuste, RafaelNeuron.2017 Apr 05;28384469
Using DNA Methylation Profiling to Evaluate Biological Age and Longevity Interventions.Petkovich, Daniel A; Podolskiy, Dmitriy I; Lobanov, Alexei V; Lee, Sang-Goo; Miller, Richard A; Gladyshev, Vadim NCell metabolism.;28380383
Understanding CARD Tricks in Apoptosomes.Wang, Li; Qiao, Qi; Wu, HaoStructure (London, England : 1993).2017 Apr 04;28380338
Mono-unsaturated fatty acids link H3K4me3 modifiers to C. elegans lifespan.Han, Shuo; Schroeder, Elizabeth A; Silva-García, Carlos G; Hebestreit, Katja; Mair, William B; Brunet, AnneNature.2017 Apr 13;28379943
Bioacoustic-enabled patterning of human iPSC-derived cardiomyocytes into 3D cardiac tissue.Serpooshan, Vahid; Chen, Pu; Wu, Haodi; Lee, Soah; Sharma, Arun; Hu, Daniel A; Venkatraman, Sneha; Ganesan, Adarsh Venkataraman; Usta, Osman Berk; Yarmush, Martin; Yang, Fan; Wu, Joseph C; Demirci, Utkan; Wu, Sean MBiomaterials.;28376365
Non-overlapping Neural Networks in Hydra vulgaris.Dupre, Christophe; Yuste, RafaelCurrent biology : CB.2017 Apr 24;28366745
Collaborative Biosynthesis of Maleimide- and Succinimide-Containing Natural Products by Fungal Polyketide Megasynthases.Sato, Michio; Dander, Jacob E; Sato, Chizuru; Hung, Yiu-Sun; Gao, Shu-Shan; Tang, Man-Cheng; Hang, Leibniz; Winter, Jaclyn M; Garg, Neil K; Watanabe, Kenji; Tang, YiJournal of the American Chemical Society.2017 Apr 19;28365998
In vivo imaging of neural activity.Yang, Weijian; Yuste, RafaelNature methods.2017 Apr;28362436
Exosome-associated AAV2 vector mediates robust gene delivery into the murine retina upon intravitreal injection.Wassmer, Sarah J; Carvalho, Livia S; György, Bence; Vandenberghe, Luk H; Maguire, Casey AScientific reports.2017 Mar 31;28361998
Poly(GP) proteins are a useful pharmacodynamic marker for C9ORF72-associated amyotrophic lateral sclerosis.Gendron, Tania F; Chew, Jeannie; Stankowski, Jeannette N; Hayes, Lindsey R; Zhang, Yong-Jie; Prudencio, Mercedes; Carlomagno, Yari; Daughrity, Lillian M; Jansen-West, Karen; Perkerson, Emilie A; O'Raw, Aliesha; Cook, Casey; Pregent, Luc; Belzil, Veronique; van Blitterswijk, Marka; Tabassian, Lilia J; Lee, Chris W; Yue, Mei; Tong, Jimei; Song, Yuping; Castanedes-Casey, Monica; Rousseau, Linda; Phillips, Virginia; Dickson, Dennis W; Rademakers, Rosa; Fryer, John D; Rush, Beth K; Pedraza, Otto; Caputo, Ana M; Desaro, Pamela; Palmucci, Carla; Robertson, Amelia; Heckman, Michael G; Diehl, Nancy N; Wiggs, Edythe; Tierney, Michael; Braun, Laura; Farren, Jennifer; Lacomis, David; Ladha, Shafeeq; Fournier, Christina N; McCluskey, Leo F; Elman, Lauren B; Toledo, Jon B; McBride, Jennifer D; Tiloca, Cinzia; Morelli, Claudia; Poletti, Barbara; Solca, Federica; Prelle, Alessandro; Wuu, Joanne; Jockel-Balsarotti, Jennifer; Rigo, Frank; Ambrose, Christine; Datta, Abhishek; Yang, Weixing; Raitcheva, Denitza; Antognetti, Giovanna; McCampbell, Alexander; Van Swieten, John C; Miller, Bruce L; Boxer, Adam L; Brown, Robert H; Bowser, Robert; Miller, Timothy M; Trojanowski, John Q; Grossman, Murray; Berry, James D; Hu, William T; Ratti, Antonia; Traynor, Bryan J; Disney, Matthew D; Benatar, Michael; Silani, Vincenzo; Glass, Jonathan D; Floeter, Mary Kay; Rothstein, Jeffrey D; Boylan, Kevin B; Petrucelli, LeonardScience translational medicine.2017 Mar 29;28356511
SMARCAD1 Contributes to the Regulation of Naive Pluripotency by Interacting with Histone Citrullination.Xiao, Shu; Lu, Jia; Sridhar, Bharat; Cao, Xiaoyi; Yu, Pengfei; Zhao, Tianyi; Chen, Chieh-Chun; McDee, Darina; Sloofman, Laura; Wang, Yang; Rivas-Astroza, Marcelo; Telugu, Bhanu Prakash V L; Levasseur, Dana; Zhang, Kang; Liang, Han; Zhao, Jing Crystal; Tanaka, Tetsuya S; Stormo, Gary; Zhong, ShengCell reports.2017 Mar 28;28355564
Gradual Suppression of Transcytosis Governs Functional Blood-Retinal Barrier Formation.Chow, Brian Wai; Gu, ChenghuaNeuron.2017 Mar 22;28334606
Genome-scale CRISPR-Cas9 knockout and transcriptional activation screening.Joung, Julia; Konermann, Silvana; Gootenberg, Jonathan S; Abudayyeh, Omar O; Platt, Randall J; Brigham, Mark D; Sanjana, Neville E; Zhang, FengNature protocols.2017 Apr;28333914
Partial Reprogramming of Pluripotent Stem Cell-Derived Cardiomyocytes into Neurons.Chuang, Wenpo; Sharma, Arun; Shukla, Praveen; Li, Guang; Mall, Moritz; Rajarajan, Kuppusamy; Abilez, Oscar J; Hamaguchi, Ryoko; Wu, Joseph C; Wernig, Marius; Wu, Sean MScientific reports.2017 Mar 22;28327614
Kinetics of Endogenous CaMKII Required for Synaptic Plasticity Revealed by Optogenetic Kinase Inhibitor.Murakoshi, Hideji; Shin, Myung Eun; Parra-Bueno, Paula; Szatmari, Erzsebet M; Shibata, Akihiro C E; Yasuda, RyoheiNeuron.2017 Apr 05;28318784
Cardiac Regeneration: Lessons From Development.Galdos, Francisco X; Guo, Yuxuan; Paige, Sharon L; VanDusen, Nathan J; Wu, Sean M; Pu, William TCirculation research.2017 Mar 17;28302741
Imaging and Optically Manipulating Neuronal Ensembles.Carrillo-Reid, Luis; Yang, Weijian; Kang Miller, Jae-Eun; Peterka, Darcy S; Yuste, RafaelAnnual review of biophysics.2017 May 22;28301770
Dynamics of embryonic stem cell differentiation inferred from single-cell transcriptomics show a series of transitions through discrete cell states.Jang, Sumin; Choubey, Sandeep; Furchtgott, Leon; Zou, Ling-Nan; Doyle, Adele; Menon, Vilas; Loew, Ethan B; Krostag, Anne-Rachel; Martinez, Refugio A; Madisen, Linda; Levi, Boaz P; Ramanathan, SharadeLife.2017 Mar 15;28296635
Mating and male pheromone kill Caenorhabditis males through distinct mechanisms.Shi, Cheng; Runnels, Alexi M; Murphy, Coleen TeLife.2017 Mar 14;28290982
Single-Cell Profiling of an In Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation.Close, Jennie L; Yao, Zizhen; Levi, Boaz P; Miller, Jeremy A; Bakken, Trygve E; Menon, Vilas; Ting, Jonathan T; Wall, Abigail; Krostag, Anne-Rachel; Thomsen, Elliot R; Nelson, Angel M; Mich, John K; Hodge, Rebecca D; Shehata, Soraya I; Glass, Ian A; Bort, Susan; Shapovalova, Nadiya V; Ngo, N Kiet; Grimley, Joshua S; Phillips, John W; Thompson, Carol L; Ramanathan, Sharad; Lein, EdNeuron.2017 Mar 08;28279351
Non-enzymatic molecular damage as a prototypic driver of aging.Golubev, Alexey; Hanson, Andrew D; Gladyshev, Vadim NThe Journal of biological chemistry.2017 Apr 14;28264930
Enzyme-Catalyzed Intramolecular Enantioselective Hydroalkoxylation.Gao, Shu-Shan; Garcia-Borràs, Marc; Barber, Joyann S; Hai, Yang; Duan, Abing; Garg, Neil K; Houk, K N; Tang, YiJournal of the American Chemical Society.2017 Mar 15;28240554
Measuring speaker-listener neural coupling with functional near infrared spectroscopy.Liu, Yichuan; Piazza, Elise A; Simony, Erez; Shewokis, Patricia A; Onaral, Banu; Hasson, Uri; Ayaz, HasanScientific reports.2017 Feb 27;28240295
Age-associated molecular changes are deleterious and may modulate life span through diet.Lee, Sang-Goo; Kaya, Alaattin; Avanesov, Andrei S; Podolskiy, Dmitriy I; Song, Eun Ju; Go, Du-Min; Jin, Gwi-Deuk; Hwang, Jae Yeon; Kim, Eun Bae; Kim, Dae-Yong; Gladyshev, Vadim NScience advances.2017 Feb;28232953
Optical control of cell signaling by single-chain photoswitchable kinases.Zhou, Xin X; Fan, Linlin Z; Li, Pengpeng; Shen, Kang; Lin, Michael ZScience (New York, N.Y.).2017 02 24;28232577
Myeloid cells pave the way for lymphatic system development and maintenance.Ivanov, Stoyan; Randolph, Gwendalyn JPflugers Archiv : European journal of physiology.2017 Apr;28220247
Mammalian Heart Regeneration: The Race to the Finish Line.Doppler, Stefanie A; Deutsch, Marcus-Andre; Serpooshan, Vahid; Li, Guang; Dzilic, Elda; Lange, Rüdiger; Krane, Markus; Wu, Sean MCirculation research.2017 Feb 17;28209796
High-throughput screening of tyrosine kinase inhibitor cardiotoxicity with human induced pluripotent stem cells.Sharma, Arun; Burridge, Paul W; McKeithan, Wesley L; Serrano, Ricardo; Shukla, Praveen; Sayed, Nazish; Churko, Jared M; Kitani, Tomoya; Wu, Haodi; Holmström, Alexandra; Matsa, Elena; Zhang, Yuan; Kumar, Anusha; Fan, Alice C; Del Álamo, Juan C; Wu, Sean M; Moslehi, Javid J; Mercola, Mark; Wu, Joseph CScience translational medicine.2017 Feb 15;28202772
A synthetic AAV vector enables safe and efficient gene transfer to the mammalian inner ear.Landegger, Lukas D; Pan, Bifeng; Askew, Charles; Wassmer, Sarah J; Gluck, Sarah D; Galvin, Alice; Taylor, Ruth; Forge, Andrew; Stankovic, Konstantina M; Holt, Jeffrey R; Vandenberghe, Luk HNature biotechnology.2017 Mar;28165475
The Quest for the FFA and Where It Led.Kanwisher, NancyThe Journal of neuroscience : the official journal of the Society for Neuroscience.2017 Feb 01;28148806
Massively multiplex single-cell Hi-C.Ramani, Vijay; Deng, Xinxian; Qiu, Ruolan; Gunderson, Kevin L; Steemers, Frank J; Disteche, Christine M; Noble, William S; Duan, Zhijun; Shendure, JayNature methods.2017 Mar;28135255
Systematic Mapping of RNA-Chromatin Interactions In Vivo.Sridhar, Bharat; Rivas-Astroza, Marcelo; Nguyen, Tri C; Chen, Weizhong; Yan, Zhangming; Cao, Xiaoyi; Hebert, Lucie; Zhong, ShengCurrent biology : CB.2017 Jan 25;28132817
Submillimeter diffusion tensor imaging and late gadolinium enhancement cardiovascular magnetic resonance of chronic myocardial infarction.Pashakhanloo, Farhad; Herzka, Daniel A; Mori, Susumu; Zviman, Muz; Halperin, Henry; Gai, Neville; Bluemke, David A; Trayanova, Natalia A; McVeigh, Elliot RJournal of cardiovascular magnetic resonance : official journal of the Society for Cardiovascular Magnetic Resonance.2017 Jan 11;28122618
Automated Remote Focusing, Drift Correction, and Photostimulation to Evaluate Structural Plasticity in Dendritic Spines.Smirnov, Michael S; Evans, Paul R; Garrett, Tavita R; Yan, Long; Yasuda, RyoheiPloS one.2017;28114380
Enzyme-catalyzed cationic epoxide rearrangements in quinolone alkaloid biosynthesis.Zou, Yi; Garcia-Borràs, Marc; Tang, Mancheng C; Hirayama, Yuichiro; Li, Dehai H; Li, Li; Watanabe, Kenji; Houk, K N; Tang, YiNature chemical biology.2017 Jan 23;28114276
Single-Cell Transcriptomic Analysis Defines Heterogeneity and Transcriptional Dynamics in the Adult Neural Stem Cell Lineage.Dulken, Ben W; Leeman, Dena S; Boutet, Stéphane C; Hebestreit, Katja; Brunet, AnneCell reports.2017 Jan 17;28099854
A Single-Cell Roadmap of Lineage Bifurcation in Human ESC Models of Embryonic Brain Development.Yao, Zizhen; Mich, John K; Ku, Sherman; Menon, Vilas; Krostag, Anne-Rachel; Martinez, Refugio A; Furchtgott, Leon; Mulholland, Heather; Bort, Susan; Fuqua, Margaret A; Gregor, Ben W; Hodge, Rebecca D; Jayabalu, Anu; May, Ryan C; Melton, Samuel; Nelson, Angelique M; Ngo, N Kiet; Shapovalova, Nadiya V; Shehata, Soraya I; Smith, Michael W; Tait, Leah J; Thompson, Carol L; Thomsen, Elliot R; Ye, Chaoyang; Glass, Ian A; Kaykas, Ajamete; Yao, Shuyuan; Phillips, John W; Grimley, Joshua S; Levi, Boaz P; Wang, Yanling; Ramanathan, SharadCell stem cell.2017 Jan 05;28094016
''Cross-sectional'' stepped wedge designs always reduce the required sample size when there is no time effect.Zhou, Xin; Liao, Xiaomei; Spiegelman, DonnaJournal of clinical epidemiology.2017 Jan 16;28093263
Nuclear Localization of Mitochondrial TCA Cycle Enzymes as a Critical Step in Mammalian Zygotic Genome Activation.Nagaraj, Raghavendra; Sharpley, Mark S; Chi, Fangtao; Braas, Daniel; Zhou, Yonggang; Kim, Rachel; Clark, Amander T; Banerjee, UtpalCell.2017 Jan 12;28086092
A Periplasmic Polymer Curves Vibrio cholerae and Promotes Pathogenesis.Bartlett, Thomas M; Bratton, Benjamin P; Duvshani, Amit; Miguel, Amanda; Sheng, Ying; Martin, Nicholas R; Nguyen, Jeffrey P; Persat, Alexandre; Desmarais, Samantha M; VanNieuwenhze, Michael S; Huang, Kerwyn Casey; Zhu, Jun; Shaevitz, Joshua W; Gitai, ZemerCell.2017 Jan 12;28086090
tRNA Misacylation with Methionine in the Mouse Gut Microbiome in Situ.Schwartz, Michael H; Pan, TaoMicrobial ecology.2017 Jan 09;28070678
CD36 deficiency impairs the small intestinal barrier and induces subclinical inflammation in mice.Cifarelli, Vincenza; Ivanov, Stoyan; Xie, Yan; Son, Ni-Huiping; Saunders, Brian T; Pietka, Terri A; Shew, Trevor M; Yoshino, Jun; Sundaresan, Sinju; Davidson, Nicholas O; Goldberg, Ira J; Gelman, Andrew E; Zinselmeyer, Bernd H; Randolph, Gwendalyn J; Abumrad, Nada ACellular and molecular gastroenterology and hepatology.2017 Jan;28066800
Cas13b Is a Type VI-B CRISPR-Associated RNA-Guided RNase Differentially Regulated by Accessory Proteins Csx27 and Csx28.Smargon, Aaron A; Cox, David B T; Pyzocha, Neena K; Zheng, Kaijie; Slaymaker, Ian M; Gootenberg, Jonathan S; Abudayyeh, Omar A; Essletzbichler, Patrick; Shmakov, Sergey; Makarova, Kira S; Koonin, Eugene V; Zhang, FengMolecular cell.2017 Feb 16;28065598
Brain State Dependence of Hippocampal Subthreshold Activity in Awake Mice.Hulse, Brad K; Lubenov, Evgueniy V; Siapas, Athanassios GCell reports.2017 Jan 03;28052244
Back to the Basics: Cnidarians Start to Fire.Bosch, Thomas C G; Klimovich, Alexander; Domazet-Lo?o, Tomislav; Gründer, Stefan; Holstein, Thomas W; Jékely, Gáspár; Miller, David J; Murillo-Rincon, Andrea P; Rentzsch, Fabian; Richards, Gemma S; Schröder, Katja; Technau, Ulrich; Yuste, RafaelTrends in neurosciences.2017 Feb;28041633
Ultrastructural evidence for impaired mitochondrial fission in the aged rhesus monkey dorsolateral prefrontal cortex.Morozov, Yury M; Datta, Dibyadeep; Paspalas, Constantinos D; Arnsten, Amy F TNeurobiology of aging.2017 Mar;28027494
Modelling methodology of atrial fibrosis affects rotor dynamics and electrograms.Roney, Caroline H; Bayer, Jason D; Zahid, Sohail; Meo, Marianna; Boyle, Patrick M J; Trayanova, Natalia A; Haïssaguerre, Michel; Dubois, Rémi; Cochet, Hubert; Vigmond, Edward JEuropace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology.2016 Dec;28011842
Towards personalized computational modelling of the fibrotic substrate for atrial arrhythmia.Boyle, Patrick M; Zahid, Sohail; Trayanova, Natalia AEuropace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology.2016 Dec;28011841
A feasibility study of arrhythmia risk prediction in patients with myocardial infarction and preserved ejection fraction.Deng, Dongdong; Arevalo, Hermenegild J; Prakosa, Adityo; Callans, David J; Trayanova, Natalia AEuropace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology.2016 Dec;28011832
Integrative Analysis of PRKAG2 Cardiomyopathy iPS and Microtissue Models Identifies AMPK as a Regulator of Metabolism, Survival, and Fibrosis.Hinson, J Travis; Chopra, Anant; Lowe, Andre; Sheng, Calvin C; Gupta, Rajat M; Kuppusamy, Rajarajan; O'Sullivan, John; Rowe, Glenn; Wakimoto, Hiroko; Gorham, Joshua; Zhang, Kehan; Musunuru, Kiran; Gerszten, Robert E; Wu, Sean M; Chen, Christopher S; Seidman, Jonathan G; Seidman, Christine ECell reports.2016 Dec 20;28009297
In vivo label-free photoacoustic flow cytography and on-the-spot laser killing of single circulating melanoma cells.He, Yun; Wang, Lidai; Shi, Junhui; Yao, Junjie; Li, Lei; Zhang, Ruiying; Huang, Chih-Hsien; Zou, Jun; Wang, Lihong VScientific reports.2016 Dec 21;28000788
Rational Design of Small Molecules Targeting Oncogenic Noncoding RNAs from Sequence.Disney, Matthew D; Angelbello, Alicia JAccounts of chemical research.2016 Dec 20;27993012
Adaptive Chromatin Remodeling Drives Glioblastoma Stem Cell Plasticity and Drug Tolerance.Liau, Brian B; Sievers, Cem; Donohue, Laura K; Gillespie, Shawn M; Flavahan, William A; Miller, Tyler E; Venteicher, Andrew S; Hebert, Christine H; Carey, Christopher D; Rodig, Scott J; Shareef, Sarah J; Najm, Fadi J; van Galen, Peter; Wakimoto, Hiroaki; Cahill, Daniel P; Rich, Jeremy N; Aster, Jon C; Suvà, Mario L; Patel, Anoop P; Bernstein, Bradley ECell stem cell.2017 Feb 02;27989769
Capturing and Manipulating Activated Neuronal Ensembles with CANE Delineates a Hypothalamic Social-Fear Circuit.Sakurai, Katsuyasu; Zhao, Shengli; Takatoh, Jun; Rodriguez, Erica; Lu, Jinghao; Leavitt, Andrew D; Fu, Min; Han, Bao-Xia; Wang, FanNeuron.2016 Nov 23;27974160
Biochemical Characterization of a Eukaryotic Decalin-Forming Diels-Alderase.Li, Li; Yu, Peiyuan; Tang, Man-Cheng; Zou, Yi; Gao, Shu-Shan; Hung, Yiu-Sun; Zhao, Muxun; Watanabe, Kenji; Houk, K N; Tang, YiJournal of the American Chemical Society.2016 Dec 14;27960349
Influence of donor age on induced pluripotent stem cells.Lo Sardo, Valentina; Ferguson, William; Erikson, Galina A; Topol, Eric J; Baldwin, Kristin K; Torkamani, AliNature biotechnology.2017 Jan;27941802
Precise small-molecule recognition of a toxic CUG RNA repeat expansion.Rzuczek, Suzanne G; Colgan, Lesley A; Nakai, Yoshio; Cameron, Michael D; Furling, Denis; Yasuda, Ryohei; Disney, Matthew DNature chemical biology.2017 Feb;27941760
New Transgenic Mouse Lines for Selectively Targeting Astrocytes and Studying Calcium Signals in Astrocyte Processes In Situ and In Vivo.Srinivasan, Rahul; Lu, Tsai-Yi; Chai, Hua; Xu, Ji; Huang, Ben S; Golshani, Peyman; Coppola, Giovanni; Khakh, Baljit SNeuron.2016 Dec 21;27939582
Gamma frequency entrainment attenuates amyloid load and modifies microglia.Iaccarino, Hannah F; Singer, Annabelle C; Martorell, Anthony J; Rudenko, Andrii; Gao, Fan; Gillingham, Tyler Z; Mathys, Hansruedi; Seo, Jinsoo; Kritskiy, Oleg; Abdurrob, Fatema; Adaikkan, Chinnakkaruppan; Canter, Rebecca G; Rueda, Richard; Brown, Emery N; Boyden, Edward S; Tsai, Li-HueiNature.2016 12 07;27929004
Multiplex gene editing by CRISPR-Cpf1 using a single crRNA array.Zetsche, Bernd; Heidenreich, Matthias; Mohanraju, Prarthana; Fedorova, Iana; Kneppers, Jeroen; DeGennaro, Ellen M; Winblad, Nerges; Choudhury, Sourav R; Abudayyeh, Omar O; Gootenberg, Jonathan S; Wu, Wen Y; Scott, David A; Severinov, Konstantin; van der Oost, John; Zhang, FengNature biotechnology.2017 Jan;27918548
Cortical Control of Spatial Resolution by VIP+ Interneurons.Ayzenshtat, Inbal; Karnani, Mahesh Miikael; Jackson, Jesse; Yuste, RafaelThe Journal of neuroscience : the official journal of the Society for Neuroscience.2016 Nov 09;27911754
Dry Age-Related Macular Degeneration Pharmacology.Wright, Charles B; Ambati, JayakrishnaHandbook of experimental pharmacology.2016 Nov 30;27900609
An Unexpected Regulatory Cascade Governs a Core Function of the Drosophila PRC1 Chromatin Protein Su(z)2.Nguyen, Son C; Yu, Stephanie; Oberlick, Elaine; Wu, Chao-TingGenetics.2017 Feb;27881472
Cell culture-based profiling across mammals reveals DNA repair and metabolism as determinants of species longevity.Ma, Siming; Upneja, Akhil; Galecki, Andrzej; Tsai, Yi-Miau; Burant, Charles F; Raskind, Sasha; Zhang, Quanwei; Zhang, Zhengdong D; Seluanov, Andrei; Gorbunova, Vera; Clish, Clary B; Miller, Richard A; Gladyshev, Vadim NeLife.2016 Nov 22;27874830
Laser Particle Stimulated Emission Microscopy.Cho, Sangyeon; Humar, Matja?; Martino, Nicola; Yun, Seok HyunPhysical review letters.2016 Nov 04;27858427
Evaluating Public Health Interventions: 5. Causal Inference in Public Health Research-Do Sex, Race, and Biological Factors Cause Health Outcomes?Glymour, M Maria; Spiegelman, DonnaAmerican journal of public health.2017 Jan;27854526
Light-based Approaches to Cardiac Arrhythmia Research: From Basic Science to Translational Applications.Karathanos, Thomas V; Boyle, Patrick M; Trayanova, Natalia AClinical Medicine Insights. Cardiology.2016;27840581
Transcriptomic Profiling Maps Anatomically Patterned Subpopulations among Single Embryonic Cardiac Cells.Li, Guang; Xu, Adele; Sim, Sopheak; Priest, James R; Tian, Xueying; Khan, Tooba; Quertermous, Thomas; Zhou, Bin; Tsao, Philip S; Quake, Stephen R; Wu, Sean MDevelopmental cell.;27840109
Design and Construction of Generalizable RNA-Protein Hybrid Controllers by Level-Matched Genetic Signal Amplification.Wang, Yen-Hsiang; McKeague, Maureen; Hsu, Tammy M; Smolke, Christina DCell systems.;27840078
Development of pharmacophore models for small molecules targeting RNA: Application to the RNA repeat expansion in myotonic dystrophy type 1.Angelbello, Alicia J; González, Àlex L; Rzuczek, Suzanne G; Disney, Matthew DBioorganic & medicinal chemistry letters.2016 Dec 01;27839685
Pupil fluctuations track rapid changes in adrenergic and cholinergic activity in cortex.Reimer, Jacob; McGinley, Matthew J; Liu, Yang; Rodenkirch, Charles; Wang, Qi; McCormick, David A; Tolias, Andreas SNature communications.2016 Nov 08;27824036
From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response.Naumann, Eva A; Fitzgerald, James E; Dunn, Timothy W; Rihel, Jason; Sompolinsky, Haim; Engert, FlorianCell.2016 Nov 3;27814522
Mechanisms of arrhythmogenesis related to calcium-driven alternans in a model of human atrial fibrillation.Chang, Kelly C; Trayanova, Natalia AScientific reports.2016 Nov 04;27812021
Fluorescent indicators for simultaneous reporting of all four cell cycle phases.Bajar, Bryce T; Lam, Amy J; Badiee, Ryan K; Oh, Young-Hee; Chu, Jun; Zhou, Xin X; Kim, Namdoo; Kim, Benjamin B; Chung, Mingyu; Yablonovitch, Arielle L; Cruz, Barney F; Kulalert, Kanokwan; Tao, Jacqueline J; Meyer, Tobias; Su, Xiao-Dong; Lin, Michael ZNature methods.2016 Dec;27798610
Simultaneous dual-color fluorescence lifetime imaging with novel red-shifted fluorescent proteins.Laviv, Tal; Kim, Benjamin B; Chu, Jun; Lam, Amy J; Lin, Michael Z; Yasuda, RyoheiNature methods.2016 Dec;27798609
A Disease or Not a Disease? Aging As a Pathology.Gladyshev, Timothy V; Gladyshev, Vadim NTrends in molecular medicine.2016 Dec;27793599
Use of a single xenon flash lamp for photoacoustic computed tomography of multiple-centimeter-thick biological tissue ex vivo and a whole mouse body in vivo.Wong, Terence T W; Zhou, Yong; Garcia-Uribe, Alejandro; Li, Lei; Maslov, Konstantin; Lin, Li; Wang, Lihong VJournal of biomedical optics.2017 Apr 01;27775747
Handheld optical-resolution photoacoustic microscopy.Lin, Li; Zhang, Pengfei; Xu, Song; Shi, Junhui; Li, Lei; Yao, Junjie; Wang, Lidai; Zou, Jun; Wang, Lihong VJournal of biomedical optics.2017 Apr 01;27775746
Nanofabricated Neural Probes for Dense 3-D Recordings of Brain Activity.Rios, Gustavo; Lubenov, Evgueniy V; Chi, Derrick; Roukes, Michael L; Siapas, Athanassios GNano letters.2016 Oct 21;27766885
Intra-Cluster Correlation Estimates for HIV-related Outcomes from Care and Treatment Clinics in Dar es Salaam, Tanzania.Barnhart, Dale; Hertzmark, Ellen; Liu, Enju; Mungure, Ester; Muya, Aisa N; Sando, David; Chalamilla, Guerino; Ulenga, Nzovu; Bärnighausen, Till; Fawzi, Wafaie; Spiegelman, DonnaContemporary clinical trials communications.2016 Dec 15;27766318
Structural basis of nonribosomal peptide macrocyclization in fungi.Zhang, Jinru; Liu, Nicholas; Cacho, Ralph A; Gong, Zhou; Liu, Zhu; Qin, Wenming; Tang, Chun; Tang, Yi; Zhou, JiahaiNature chemical biology.2016 Oct 17;27748753
Lymphoid Aggregates Remodel Lymphatic Collecting Vessels that Serve Mesenteric Lymph Nodes in Crohn Disease.Randolph, Gwendalyn J; Bala, Shashi; Rahier, Jean-François; Johnson, Michael W; Wang, Peter L; Nalbantoglu, ILKe; Dubuquoy, Laurent; Chau, Amélie; Pariente, Benjamin; Kartheuser, Alex; Zinselmeyer, Bernd H; Colombel, Jean-FredericThe American journal of pathology.2016 Dec;27746181
Cryo-EM Structure of Caspase-8 Tandem DED Filament Reveals Assembly and Regulation Mechanisms of the Death-Inducing Signaling Complex.Fu, Tian-Min; Li, Yang; Lu, Alvin; Li, Zongli; Vajjhala, Parimala R; Cruz, Anthony C; Srivastava, Devendra B; DiMaio, Frank; Penczek, Pawel A; Siegel, Richard M; Stacey, Katryn J; Egelman, Edward H; Wu, HaoMolecular cell.2016 Oct 20;27746017
High-resolution interrogation of functional elements in the noncoding genome.Sanjana, Neville E; Wright, Jason; Zheng, Kaijie; Shalem, Ophir; Fontanillas, Pierre; Joung, Julia; Cheng, Christine; Regev, Aviv; Zhang, FengScience (New York, N.Y.).2016 Sep 30;27708104
Orientation Tuning Depends on Spatial Frequency in Mouse Visual Cortex.Ayzenshtat, Inbal; Jackson, Jesse; Yuste, RafaeleNeuro.2016 Sep-Oct;27699210
Biosynthesis of Strained Piperazine Alkaloids - Uncovering the Concise Pathway of Herquline A.Yu, Xia; Liu, Fang; Zou, Yi; Tang, Man-Cheng; Hang, Leibniz; Houk, Kendall N; Tang, YiJournal of the American Chemical Society.2016 Oct 3;27690412
Mapping 3D genome architecture through in situ DNase Hi-C.Ramani, Vijay; Cusanovich, Darren A; Hause, Ronald J; Ma, Wenxiu; Qiu, Ruolan; Deng, Xinxian; Blau, C Anthony; Disteche, Christine M; Noble, William S; Shendure, Jay; Duan, ZhijunNature protocols.2016 Nov;27685100
Early somatic mosaicism is a rare cause of long-QT syndrome.Priest, James Rush; Gawad, Charles; Kahlig, Kristopher M; Yu, Joseph K; O'Hara, Thomas; Boyle, Patrick M; Rajamani, Sridharan; Clark, Michael J; Garcia, Sarah T K; Ceresnak, Scott; Harris, Jason; Boyle, Sean; Dewey, Frederick E; Malloy-Walton, Lindsey; Dunn, Kyla; Grove, Megan; Perez, Marco V; Neff, Norma F; Chen, Richard; Maeda, Katsuhide; Dubin, Anne; Belardinelli, Luiz; West, John; Antolik, Christian; Macaya, Daniela; Quertermous, Thomas; Trayanova, Natalia A; Quake, Stephen R; Ashley, Euan AProceedings of the National Academy of Sciences of the United States of America.2016 Oct 11;27681629
Autocrine BDNF-TrkB signalling within a single dendritic spine.Harward, Stephen C; Hedrick, Nathan G; Hall, Charles E; Parra-Bueno, Paula; Milner, Teresa A; Pan, Enhui; Laviv, Tal; Hempstead, Barbara L; Yasuda, Ryohei; McNamara, James ONature.2016 Oct 06;27680698
Rho GTPase complementation underlies BDNF-dependent homo- and heterosynaptic plasticity.Hedrick, Nathan G; Harward, Stephen C; Hall, Charles E; Murakoshi, Hideji; McNamara, James O; Yasuda, RyoheiNature.2016 Oct 06;27680697
Gene Therapy and Stem Cell Transplantation in Retinal Disease: The New Frontier.MacLaren, Robert E; Bennett, Jean; Schwartz, Steven DOphthalmology.2016 Oct;27664291
iPSC-derived cardiomyocytes reveal abnormal TGF-? signalling in left ventricular non-compaction cardiomyopathy.Kodo, Kazuki; Ong, Sang-Ging; Jahanbani, Fereshteh; Termglinchan, Vittavat; Hirono, Keiichi; InanlooRahatloo, Kolsoum; Ebert, Antje D; Shukla, Praveen; Abilez, Oscar J; Churko, Jared M; Karakikes, Ioannis; Jung, Gwanghyun; Ichida, Fukiko; Wu, Sean M; Snyder, Michael P; Bernstein, Daniel; Wu, Joseph CNature cell biology.2016 Oct;27642787
Regulation of X-linked gene expression during early mouse development by Rlim.Wang, Feng; Shin, JongDae; Shea, Jeremy M; Yu, Jun; Bo?kovi?, Ana; Byron, Meg; Zhu, Xiaochun; Shalek, Alex K; Regev, Aviv; Lawrence, Jeanne B; Torres, Eduardo M; Zhu, Lihua J; Rando, Oliver J; Bach, IngolfeLife.2016 Sep 19;27642011
Determining the fidelity of tRNA aminoacylation via microarrays.Schwartz, Michael H; Pan, TaoMethods (San Diego, Calif.).2016 Sep 14;27639882
Hybridized wavefront shaping for high-speed, high-efficiency focusing through dynamic diffusive media.Hemphill, Ashton S; Tay, Jian Wei; Wang, Lihong VJournal of biomedical optics.2016 Dec 01;27626770
Evolutionary Gain of Alanine Mischarging to Noncognate tRNAs with a G4:U69 Base Pair.Sun, Litao; Gomes, Ana Cristina; He, Weiwei; Zhou, Huihao; Wang, Xiaoyun; Pan, David W; Schimmel, Paul; Pan, Tao; Yang, Xiang-LeiJournal of the American Chemical Society.2016 Oct 05;27622773
Optogenetic defibrillation terminates ventricular arrhythmia in mouse hearts and human simulations.Bruegmann, Tobias; Boyle, Patrick M; Vogt, Christoph C; Karathanos, Thomas V; Arevalo, Hermenegild J; Fleischmann, Bernd K; Trayanova, Natalia A; Sasse, PhilippThe Journal of clinical investigation.2016 Oct 03;27617859
tRNA base methylation identification and quantification via high-throughput sequencing.Clark, Wesley C; Evans, Molly E; Dominissini, Dan; Zheng, Guanqun; Pan, TaoRNA (New York, N.Y.).2016 Nov;27613580
Codon optimality controls differential mRNA translation during amino acid starvation.Saikia, Mridusmita; Wang, Xiaoyun; Mao, Yuanhui; Wan, Ji; Pan, Tao; Qian, Shu-BingRNA (New York, N.Y.).2016 Nov;27613579
Properties of the Visible Light Phototaxis and UV Avoidance Behaviors in the Larval Zebrafish.Guggiana-Nilo, Drago A; Engert, FlorianFrontiers in behavioral neuroscience.2016;27594828
Institutional Conflict of Interest.Bennett, JeanJAMA ophthalmology.2016 Nov 01;27583791
Techniques for measuring cellular zinc.Carpenter, Margaret C; Lo, Maria N; Palmer, Amy EArchives of biochemistry and biophysics.2016 Aug 28;27580940
Phenotypic lentivirus screens to identify functional single domain antibodies.Schmidt, Florian I; Hanke, Leo; Morin, Benjamin; Brewer, Rebeccah; Brusic, Vesna; Whelan, Sean P J; Ploegh, Hidde LNature microbiology.2016;27573105
Microdomain-Specific Modulation of L-Type Calcium Channels Leads to Triggered Ventricular Arrhythmia in Heart Failure.Sanchez-Alonso, Jose L; Bhargava, Anamika; O'Hara, Thomas; Glukhov, Alexey V; Schobesberger, Sophie; Bhogal, Navneet; Sikkel, Markus B; Mansfield, Catherine; Korchev, Yuri E; Lyon, Alexander R; Punjabi, Prakash P; Nikolaev, Viacheslav O; Trayanova, Natalia A; Gorelik, JuliaCirculation research.2016 Sep 30;27572487
Genetically encoded indicators of neuronal activity.Lin, Michael Z; Schnitzer, Mark JNature neuroscience.2016 Aug 26;27571193
Posttranscriptional Regulation of Glycoprotein Quality Control in the Endoplasmic Reticulum Is Controlled by the E2 Ub-Conjugating Enzyme UBC6e.Hagiwara, Masatoshi; Ling, Jingjing; Koenig, Paul-Albert; Ploegh, Hidde LMolecular cell.2016 Sep 1;27570074
MHC II+ resident peritoneal and pleural macrophages rely on IRF4 for development from circulating monocytes.Kim, Ki-Wook; Williams, Jesse W; Wang, Ya-Ting; Ivanov, Stoyan; Gilfillan, Susan; Colonna, Marco; Virgin, Herbert W; Gautier, Emmanuel L; Randolph, Gwendalyn JThe Journal of experimental medicine.2016 Sep 19;27551152
Association of left atrial epicardial adipose tissue with electrogram bipolar voltage and fractionation: Electrophysiologic substrates for atrial fibrillation.Zghaib, Tarek; Ipek, Esra Gucuk; Zahid, Sohail; Balouch, Muhammad Adnan; Misra, Satish; Ashikaga, Hiroshi; Berger, Ronald D; Marine, Joseph E; Spragg, David D; Zimmerman, Stefan L; Zipunnikov, Vadim; Trayanova, Natalia; Calkins, Hugh; Nazarian, SamanHeart rhythm.2016 Dec;27546816
Intrinsic Versus Extrinsic Cancer Risk Factors and Aging.Podolskiy, Dmitriy I; Gladyshev, Vadim NTrends in molecular medicine.2016 Aug 17;27544777
Investigating the Interplay between Sister Chromatid Cohesion and Homolog Pairing in Drosophila Nuclei.Senaratne, T Niroshini; Joyce, Eric F; Nguyen, Son C; Wu, C-TingPLoS genetics.2016 Aug;27541002
Focusing light through biological tissue and tissue-mimicking phantoms up to 9.6 cm in thickness with digital optical phase conjugation.Shen, Yuecheng; Liu, Yan; Ma, Cheng; Wang, Lihong VJournal of biomedical optics.2016 Aug 1;27533439
Engineering a microbial platform for de novo biosynthesis of diverse methylxanthines.McKeague, Maureen; Wang, Yen-Hsiang; Cravens, Aaron; Win, Maung Nyan; Smolke, Christina DMetabolic engineering.2016 Aug 9;27519552
Imprinting and recalling cortical ensembles.Carrillo-Reid, Luis; Yang, Weijian; Bando, Yuki; Peterka, Darcy S; Yuste, RafaelScience (New York, N.Y.).2016 Aug 12;27516599
Analysis of cancer genomes reveals basic features of human aging and its role in cancer development.Podolskiy, Dmitriy I; Lobanov, Alexei V; Kryukov, Gregory V; Gladyshev, Vadim NNature communications.2016 Aug 12;27515585
Evaluating Public Health Interventions: 4. The Nurses' Health Study and Methods for Eliminating Bias Attributable to Measurement Error and Misclassification.Spiegelman, DonnaAmerican journal of public health.2016 Sep;27509282
Neuromodulation of Courtship Drive through Tyramine-Responsive Neurons in the Drosophila Brain.Huang, Jia; Liu, Weiwei; Qi, Yi-Xiang; Luo, Junjie; Montell, CraigCurrent biology : CB.2016 Aug 3;27498566
Lock-in camera based heterodyne holography for ultrasound-modulated optical tomography inside dynamic scattering media.Liu, Yan; Shen, Yuecheng; Ma, Cheng; Shi, Junhui; Wang, Lihong VApplied physics letters.2016 Jun 6;27493275
Div-Seq: Single-nucleus RNA-Seq reveals dynamics of rare adult newborn neurons.Habib, Naomi; Li, Yinqing; Heidenreich, Matthias; Swiech, Lukasz; Avraham-Davidi, Inbal; Trombetta, John J; Hession, Cynthia; Zhang, Feng; Regev, AvivScience (New York, N.Y.).2016 08 26;27471252
Structure-guided wavelength tuning in far-red fluorescent proteins.Ng, Ho-Leung; Lin, Michael ZCurrent opinion in structural biology.2016 Aug;27468111
A practical guide to photoacoustic tomography in the life sciences.Wang, Lihong V; Yao, JunjieNature methods.2016 Jul 28;27467726
A Revised Hemodynamic Theory of Age-Related Macular Degeneration.Gelfand, Bradley D; Ambati, JayakrishnaTrends in molecular medicine.2016 Jul 13;27423265
The Troubled Touch of Autism.Tuttle, Alexander H; Bartsch, Victoria B; Zylka, Mark JCell.2016 Jul 14;27419865
Somatostatin Interneurons Control a Key Component of Mismatch Negativity in Mouse Visual Cortex.Hamm, Jordan P; Yuste, RafaelCell reports.2016 Jul 19;27396334
Differential Multiphoton Laser Scanning Microscopy.Field, Jeffrey J; Sheetz, Kraig E; Chandler, Eric V; Hoover, Erich E; Young, Michael D; Ding, Shi-You; Sylvester, Anne W; Kleinfeld, David; Squier, Jeff AIEEE journal of selected topics in quantum electronics : a publication of the IEEE Lasers and Electro-optics Society.2012 Jan-Feb;27390511
Inflammasome-activated gasdermin D causes pyroptosis by forming membrane pores.Liu, Xing; Zhang, Zhibin; Ruan, Jianbin; Pan, Youdong; Magupalli, Venkat Giri; Wu, Hao; Lieberman, JudyNature.2016 07 07;27383986
Separating Putative Pathogens from Background Contamination with Principal Orthogonal Decomposition: Evidence for Leptospira in the Ugandan Neonatal Septisome.Schiff, Steven J; Kiwanuka, Julius; Riggio, Gina; Nguyen, Lan; Mu, Kevin; Sproul, Emily; Bazira, Joel; Mwanga-Amumpaire, Juliet; Tumusiime, Dickson; Nyesigire, Eunice; Lwanga, Nkangi; Bogale, Kaleb T; Kapur, Vivek; Broach, James R; Morton, Sarah U; Warf, Benjamin C; Poss, MaryFrontiers in medicine.2016;27379237
Engineering biosynthesis of the anticancer alkaloid noscapine in yeast.Li, Yanran; Smolke, Christina DNature communications.2016 Jul 05;27378283
Nanoscale imaging of RNA with expansion microscopy.Chen, Fei; Wassie, Asmamaw T; Cote, Allison J; Sinha, Anubhav; Alon, Shahar; Asano, Shoh; Daugharthy, Evan R; Chang, Jae-Byum; Marblestone, Adam; Church, George M; Raj, Arjun; Boyden, Edward SNature methods.2016 Aug;27376770
Protein-retention expansion microscopy of cells and tissues labeled using standard fluorescent proteins and antibodies.Tillberg, Paul W; Chen, Fei; Piatkevich, Kiryl D; Zhao, Yongxin; Yu, Chih-Chieh Jay; English, Brian P; Gao, Linyi; Martorell, Anthony; Suk, Ho-Jun; Yoshida, Fumiaki; DeGennaro, Ellen M; Roossien, Douglas H; Gong, Guanyu; Seneviratne, Uthpala; Tannenbaum, Nature biotechnology.2016 Jul 4;27376584
Safety and durability of effect of contralateral-eye administration of AAV2 gene therapy in patients with childhood-onset blindness caused by RPE65 mutations: a follow-on phase 1 trial.Bennett, Jean; Wellman, Jennifer; Marshall, Kathleen A; McCague, Sarah; Ashtari, Manzar; DiStefano-Pappas, Julie; Elci, Okan U; Chung, Daniel C; Sun, Junwei; Wright, J Fraser; Cross, Dominique R; Aravand, Puya; Cyckowski, Laura L; Bennicelli, Jeannette L; Mingozzi, Federico; Auricchio, Alberto; Pierce, Eric A; Ruggiero, Jason; Leroy, Bart P; Simonelli, Francesca; High, Katherine A; Maguire, Albert MLancet (London, England).2016 Aug 13;27375040
Mapping RNA-RNA interactome and RNA structure in vivo by MARIO.Nguyen, Tri C; Cao, Xiaoyi; Yu, Pengfei; Xiao, Shu; Lu, Jia; Biase, Fernando H; Sridhar, Bharat; Huang, Norman; Zhang, Kang; Zhong, ShengNature communications.2016 Jun 24;27338251
Computational rabbit models to investigate the initiation, perpetuation, and termination of ventricular arrhythmia.Arevalo, Hermenegild J; Boyle, Patrick M; Trayanova, Natalia AProgress in biophysics and molecular biology.2016 Jul;27334789
Interaction of tRNA with MEK2 in pancreatic cancer cells.Wang, Xiaoyun; Chow, Christina R; Ebine, Kazumi; Lee, Jiyoung; Rosner, Marsha R; Pan, Tao; Munshi, Hidayatullah GScientific reports.2016 Jun 15;27301426
Evaluating Public Health Interventions: 3. The Two-Stage Design for Confounding Bias Reduction-Having Your Cake and Eating It Two.Spiegelman, Donna; Rivera-Rodriguez, Claudia L; Haneuse, SebastienAmerican journal of public health.2016 Jul;27285260
Distilling complexity to advance cardiac tissue engineering.Ogle, Brenda M; Bursac, Nenad; Domian, Ibrahim; Huang, Ngan F; Menasché, Philippe; Murry, Charles E; Pruitt, Beth; Radisic, Milica; Wu, Joseph C; Wu, Sean M; Zhang, Jianyi; Zimmermann, Wolfram-Hubertus; Vunjak-Novakovic, GordanaScience translational medicine.2016 Jun 8;27280684
Small Molecule Recognition and Tools to Study Modulation of r(CGG)(exp) in Fragile X-Associated Tremor Ataxia Syndrome.Yang, Wang-Yong; He, Fang; Strack, Rita L; Oh, Seok Yoon; Frazer, Michelle; Jaffrey, Samie R; Todd, Peter K; Disney, Matthew DACS chemical biology.2016 Sep 16;27276216
Grueneisen relaxation photoacoustic microscopy in vivo.Ma, Jun; Shi, Junhui; Hai, Pengfei; Zhou, Yong; Wang, Lihong VJournal of biomedical optics.2016 Jun 1;27272096
Glutathione peroxidase 4 and vitamin E cooperatively prevent hepatocellular degeneration.Carlson, Bradley A; Tobe, Ryuta; Yefremova, Elena; Tsuji, Petra A; Hoffmann, Victoria J; Schweizer, Ulrich; Gladyshev, Vadim N; Hatfield, Dolph L; Conrad, MarcusRedox biology.2016 Oct;27262435
Towards Consensus Gene Ages.Liebeskind, Benjamin J; McWhite, Claire D; Marcotte, Edward MGenome biology and evolution.2016;27259914
The Aging Epigenome.Booth, Lauren N; Brunet, AnneMolecular cell.2016 Jun 2;27259204
C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector.Abudayyeh, Omar O; Gootenberg, Jonathan S; Konermann, Silvana; Joung, Julia; Slaymaker, Ian M; Cox, David B T; Shmakov, Sergey; Makarova, Kira S; Semenova, Ekaterina; Minakhin, Leonid; Severinov, Konstantin; Regev, Aviv; Lander, Eric S; Koonin, Eugene V; Zhang, FengScience (New York, N.Y.).2016 Aug 5;27256883
Design of a bioactive small molecule that targets r(AUUCU) repeats in spinocerebellar ataxia 10.Yang, Wang-Yong; Gao, Rui; Southern, Mark; Sarkar, Partha S; Disney, Matthew DNature communications.2016 Jun 01;27248057
Topoisomerase 1 Regulates Gene Expression in Neurons through Cleavage Complex-Dependent and -Independent Mechanisms.Mabb, Angela M; Simon, Jeremy M; King, Ian F; Lee, Hyeong-Min; An, Lin-Kun; Philpot, Benjamin D; Zylka, Mark JPloS one.2016;27231886
Whole-organism lineage tracing by combinatorial and cumulative genome editing.McKenna, Aaron; Findlay, Gregory M; Gagnon, James A; Horwitz, Marshall S; Schier, Alexander F; Shendure, JayScience (New York, N.Y.).2016 Jul 29;27229144
Mechanisms linking electrical alternans and clinical ventricular arrhythmia in human heart failure.Bayer, J D; Lalani, G G; Vigmond, E J; Narayan, S M; Trayanova, N AHeart rhythm : the official journal of the Heart Rhythm Society.2016 May 20;27215536
Construction of Cell-based Neurotransmitter Fluorescent Engineered Reporters (CNiFERs) for Optical Detection of Neurotransmitters In Vivo.Lacin, Emre; Muller, Arnaud; Fernando, Marian; Kleinfeld, David; Slesinger, Paul AJournal of visualized experiments : JoVE.2016;27214050
The Structure and Dynamics of Higher-Order Assemblies: Amyloids, Signalosomes, and Granules.Wu, Hao; Fuxreiter, MonikaCell.2016 May 19;27203110
Identification of the long, edited dsRNAome of LPS-stimulated immune cells.Blango, Matthew G; Bass, Brenda LGenome research.2016 Jun;27197207
Multiplexed neural recording along a single optical fiber via optical reflectometry.Rodriques, Samuel G; Marblestone, Adam H; Scholvin, Jorg; Dapello, Joel; Sarkar, Deblina; Mankin, Max; Gao, Ruixuan; Wood, Lowell; Boyden, Edward SJournal of biomedical optics.2016 May 1;27194640
Bit-efficient, sub-millisecond wavefront measurement using a lock-in camera for time-reversal based optical focusing inside scattering media.Liu, Yan; Ma, Cheng; Shen, Yuecheng; Wang, Lihong VOptics letters.2016 Apr 1;27192226
High-Throughput, High-Resolution Mapping of Protein Localization in Mammalian Brain by In Vivo Genome Editing.Mikuni, Takayasu; Nishiyama, Jun; Sun, Ye; Kamasawa, Naomi; Yasuda, RyoheiCell.2016 Jun 16;27180908
The leak channel NALCN controls tonic firing and glycolytic sensitivity of substantia nigra pars reticulata neurons.Lutas, Andrew; Lahmann, Carolina; Soumillon, Magali; Yellen, GaryeLife.2016 May 13;27177420
The wiring diagram of a glomerular olfactory system.Berck, Matthew E; Khandelwal, Avinash; Claus, Lindsey; Hernandez-Nunez, Luis; Si, Guangwei; Tabone, Christopher J; Li, Feng; Truman, James W; Fetter, Rick D; Louis, Matthieu; Samuel, Aravinthan Dt; Cardona, AlberteLife.2016 May 13;27177418
Variability in paralimbic dopamine signaling correlates with subjective responses to d-amphetamine.Smith, Christopher T; Dang, Linh C; Cowan, Ronald L; Kessler, Robert M; Zald, David HNeuropharmacology.2016 Sep;27174408
Arrhythmia risk stratification of patients after myocardial infarction using personalized heart models.Arevalo, Hermenegild J; Vadakkumpadan, Fijoy; Guallar, Eliseo; Jebb, Alexander; Malamas, Peter; Wu, Katherine C; Trayanova, Natalia ANature communications.2016 May 10;27164184
Cholinergic Signaling Controls Conditioned Fear Behaviors and Enhances Plasticity of Cortical-Amygdala Circuits.Jiang, Li; Kundu, Srikanya; Lederman, James D; López-Hernández, Gretchen Y; Ballinger, Elizabeth C; Wang, Shaohua; Talmage, David A; Role, Lorna WNeuron.2016 Jun 1;27161525
The ciliopathy-associated CPLANE proteins direct basal body recruitment of intraflagellar transport machinery.Toriyama, Michinori; Lee, Chanjae; Taylor, S Paige; Duran, Ivan; Cohn, Daniel H; Bruel, Ange-Line; Tabler, Jacqueline M; Drew, Kevin; Kelly, Marcus R; Kim, Sukyoung; Park, Tae Joo; Braun, Daniela A; Pierquin, Ghislaine; Biver, Armand; Wagner, Kerstin; MalNature genetics.2016 Jun;27158779
Spiegelman Responds.Spiegelman, DonnaAmerican journal of public health.2016 Jun;27153027
Conflicting Selection Pressures Will Constrain Viral Escape from Interfering Particles: Principles for Designing Resistance-Proof Antivirals.Rast, Luke I; Rouzine, Igor M; Rozhnova, Ganna; Bishop, Lisa; Weinberger, Ariel D; Weinberger, Leor SPLoS computational biology.2016 May;27152856
Benchmarking Spike Rate Inference in Population Calcium Imaging.Theis, Lucas; Berens, Philipp; Froudarakis, Emmanouil; Reimer, Jacob; Román Rosón, Miroslav; Baden, Tom; Euler, Thomas; Tolias, Andreas S; Bethge, MatthiasNeuron.2016 May 4;27151639
Exploiting Genetic Interference for Antiviral Therapy.Tanner, Elizabeth J; Kirkegaard, Karla A; Weinberger, Leor SPLoS genetics.2016 May;27149616
A scaffold protein connects type IV pili with the Chp chemosensory system to mediate activation of virulence signaling in Pseudomonas aeruginosa.Inclan, Yuki F; Persat, Alexandre; Greninger, Alexander; Von Dollen, John; Johnson, Jeffery; Krogan, Nevan; Gitai, Zemer; Engel, Joanne NMolecular microbiology.2016 May 3;27145134
Wishbone identifies bifurcating developmental trajectories from single-cell data.Setty, Manu; Tadmor, Michelle D; Reich-Zeliger, Shlomit; Angel, Omer; Salame, Tomer Meir; Kathail, Pooja; Choi, Kristy; Bendall, Sean; Friedman, Nir; Pe'er, DanaNature biotechnology.2016 Jun;27136076
A review of snapshot multidimensional optical imaging: measuring photon tags in parallel.Gao, Liang; Wang, Lihong VPhysics reports.2016 Feb 29;27134340
Poly (lactic acid)-based biomaterials for orthopaedic regenerative engineering.Narayanan, Ganesh; Vernekar, Varadraj N; Kuyinu, Emmanuel L; Laurencin, Cato TAdvanced drug delivery reviews.2016 Apr 25;27125191
Programmable RNA-binding protein composed of repeats of a single modular unit.Adamala, Katarzyna P; Martin-Alarcon, Daniel A; Boyden, Edward SProceedings of the National Academy of Sciences of the United States of America.2016 May 10;27118836
Crystal Structure of Cpf1 in Complex with Guide RNA and Target DNA.Yamano, Takashi; Nishimasu, Hiroshi; Zetsche, Bernd; Hirano, Hisato; Slaymaker, Ian M; Li, Yinqing; Fedorova, Iana; Nakane, Takanori; Makarova, Kira S; Koonin, Eugene V; Ishitani, Ryuichiro; Zhang, Feng; Nureki, OsamuCell.2016 May 5;27114038
Durable antitumor responses to CD47 blockade require adaptive immune stimulation.Sockolosky, Jonathan T; Dougan, Michael; Ingram, Jessica R; Ho, Chia Chi M; Kauke, Monique J; Almo, Steven C; Ploegh, Hidde L; Garcia, K ChristopherProceedings of the National Academy of Sciences of the United States of America.2016 May 10;27091975
Tracking Resilience to Infections by Mapping Disease Space.Torres, Brenda Y; Oliveira, Jose Henrique M; Thomas Tate, Ann; Rath, Poonam; Cumnock, Katherine; Schneider, David SPLoS biology.2016 Apr;27088359
How Many Parameters Does It Take to Describe Disease Tolerance?Louie, Alexander; Song, Kyung Han; Hotson, Alejandra; Thomas Tate, Ann; Schneider, David SPLoS biology.2016 Apr;27088212
Tutorial on photoacoustic tomography.Zhou, Yong; Yao, Junjie; Wang, Lihong VJournal of biomedical optics.2016 Jun;27086868
Ketamine's Antidepressant Actions: Potential Mechanisms in the Primate Medial Prefrontal Circuits That Represent Aversive Experience.Arnsten, Amy F T; Murray, John D; Seo, Hyojung; Lee, DaeyeolBiological psychiatry.2016 May 01;27079495
Oxidative trans to cis Isomerization of Olefins in Polyketide Biosynthesis.Yamamoto, Tsuyoshi; Tsunematsu, Yuta; Hara, Kodai; Suzuki, Tomohiro; Kishimoto, Shinji; Kawagishi, Hirokazu; Noguchi, Hiroshi; Hashimoto, Hiroshi; Tang, Yi; Hotta, Kinya; Watanabe, KenjiAngewandte Chemie (International ed. in English).2016 May 17;27072782
A single domain antibody fragment that recognizes the adaptor ASC defines the role of ASC domains in inflammasome assembly.Schmidt, Florian I; Lu, Alvin; Chen, Jeff W; Ruan, Jianbin; Tang, Catherine; Wu, Hao; Ploegh, Hidde LThe Journal of experimental medicine.2016 May 2;27069117
Pairing and anti-pairing: a balancing act in the diploid genome.Joyce, Eric F; Erceg, Jelena; Wu, C-TingCurrent opinion in genetics & development.2016 Apr;27065367
Aging: progressive decline in fitness due to the rising deleteriome adjusted by genetic, environmental, and stochastic processes.Gladyshev, Vadim NAging cell.2016 Aug;27060562
Guided Homing of Cells in Multi-Photon Microfabricated Bioscaffolds.Skylar-Scott, Mark A; Liu, Man-Chi; Wu, Yuelong; Dixit, Atray; Yanik, Mehmet FatihAdvanced healthcare materials.2016 May;27059425
The Quest toward limb regeneration: a regenerative engineering approach.Laurencin, Cato T; Nair, Lakshmi SRegenerative biomaterials.2016 Jun;27047679
Molecular basis of caspase-1 polymerization and its inhibition by a new capping mechanism.Lu, Alvin; Li, Yang; Schmidt, Florian I; Yin, Qian; Chen, Shuobing; Fu, Tian-Min; Tong, Alexander B; Ploegh, Hidde L; Mao, Youdong; Wu, HaoNature structural & molecular biology.2016 May;27043298
Sperm is epigenetically programmed to regulate gene transcription in embryos.Teperek, Marta; Simeone, Angela; Gaggioli, Vincent; Miyamoto, Kei; Allen, George E; Erkek, Serap; Kwon, Taejoon; Marcotte, Edward M; Zegerman, Philip; Bradshaw, Charles R; Peters, Antoine H F M; Gurdon, John B; Jullien, JeromeGenome research.2016 Mar 31;27034506
Defining Molecular Basis for Longevity Traits in Natural Yeast Isolates.Kaya, Alaattin; Ma, Siming; Wasko, Brian; Lee, Mitchell; Kaeberlein, Matt; Gladyshev, Vadim Nnpj aging and mechanisms of disease.2015;27030810
Identification of chemicals that mimic transcriptional changes associated with autism, brain aging and neurodegeneration.Pearson, Brandon L; Simon, Jeremy M; McCoy, Eric S; Salazar, Gabriela; Fragola, Giulia; Zylka, Mark JNature communications.2016;27029645
Astrocyte scar formation aids central nervous system axon regeneration.Anderson, Mark A; Burda, Joshua E; Ren, Yilong; Ao, Yan; O'Shea, Timothy M; Kawaguchi, Riki; Coppola, Giovanni; Khakh, Baljit S; Deming, Timothy J; Sofroniew, Michael VNature.2016 Apr 14;27027288
Cooperative Subnetworks of Molecularly Similar Interneurons in Mouse Neocortex.Karnani, Mahesh M; Jackson, Jesse; Ayzenshtat, Inbal; Tucciarone, Jason; Manoocheri, Kasra; Snider, William G; Yuste, RafaelNeuron.2016 Apr 6;27021171
Opening Holes in the Blanket of Inhibition: Localized Lateral Disinhibition by VIP Interneurons.Karnani, Mahesh M; Jackson, Jesse; Ayzenshtat, Inbal; Hamzehei Sichani, Azadeh; Manoocheri, Kasra; Kim, Samuel; Yuste, RafaelThe Journal of neuroscience : the official journal of the Society for Neuroscience.2016 Mar 23;27013676
Dysfunctional Calcium and Glutamate Signaling in Striatal Astrocytes from Huntington's Disease Model Mice.Jiang, Ruotian; Diaz-Castro, Blanca; Looger, Loren L; Khakh, Baljit SThe Journal of neuroscience : the official journal of the Society for Neuroscience.2016 Mar 23;27013675
Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion.Dunn, Timothy W; Mu, Yu; Narayan, Sujatha; Randlett, Owen; Naumann, Eva A; Yang, Chao-Tsung; Schier, Alexander F; Freeman, Jeremy; Engert, Florian; Ahrens, Misha BeLife.2016 Mar 22;27003593
CCR7 and IRF4-dependent dendritic cells regulate lymphatic collecting vessel permeability.Ivanov, Stoyan; Scallan, Joshua P; Kim, Ki-Wook; Werth, Kathrin; Johnson, Michael W; Saunders, Brian T; Wang, Peter L; Kuan, Emma L; Straub, Adam C; Ouhachi, Melissa; Weinstein, Erica G; Williams, Jesse W; Briseño, Carlos; Colonna, Marco; Isakson, Brant EThe Journal of clinical investigation.2016 Apr 1;26999610
Regenerative Engineering of Cartilage Using Adipose-Derived Stem Cells.Kasir, Rafid; Vernekar, Varadraj N; Laurencin, Cato TRegenerative engineering and translational medicine.2015 Dec 1;26998511
REGENERATIVE ENGINEERING: APPROACHES TO LIMB REGENERATION AND OTHER GRAND CHALLENGES.Laurencin, Cato T; Nair, Lakshmi SRegenerative engineering and translational medicine.2015 Apr 1;26985451
Phenalenone Polyketide Cyclization Catalyzed by Fungal Polyketide Synthase and Flavin-Dependent Monooxygenase.Gao, Shu-Shan; Duan, Abing; Xu, Wei; Yu, Peiyuan; Hang, Leibniz; Houk, K N; Tang, YiJournal of the American Chemical Society.2016 Mar 22;26978228
Focusing light through scattering media by full-polarization digital optical phase conjugation.Shen, Yuecheng; Liu, Yan; Ma, Cheng; Wang, Lihong VOptics letters.2016 Mar 15;26977651
Hybrid Microscopy: Enabling Inexpensive High-Performance Imaging through Combined Physical and Optical Magnifications.Zhang, Yu Shrike; Chang, Jae-Byum; Alvarez, Mario Moisés; Trujillo-de Santiago, Grissel; Aleman, Julio; Batzaya, Byambaa; Krishnadoss, Vaishali; Ramanujam, Aishwarya Aravamudhan; Kazemzadeh-Narbat, Mehdi; Chen, Fei; Tillberg, Paul W; Dokmeci, Mehmet RemziScientific reports.2016;26975883
Calcium imaging of neural circuits with extended depth-of-field light-sheet microscopy.Quirin, Sean; Vladimirov, Nikita; Yang, Chao-Tsung; Peterka, Darcy S; Yuste, Rafael; B Ahrens, MishaOptics letters.2016 Mar 1;26974063
Opportunities in the design and application of RNA for gene expression control.McKeague, Maureen; Wong, Remus S; Smolke, Christina DNucleic acids research.2016 Apr 20;26969733
P450-Mediated Coupling of Indole Fragments To Forge Communesin and Unnatural Isomers.Lin, Hsiao-Ching; McMahon, Travis C; Patel, Ashay; Corsello, Michael; Simon, Adam; Xu, Wei; Zhao, Muxun; Houk, K N; Garg, Neil K; Tang, YiJournal of the American Chemical Society.2016 Mar 18;26963294
VIP+ interneurons control neocortical activity across brain states.Jackson, Jesse; Ayzenshtat, Inbal; Karnani, Mahesh M; Yuste, RafaelJournal of neurophysiology.2016 Jun 1;26961109
Combinatorial Generation of Chemical Diversity by Redox Enzymes in Chaetoviridin Biosynthesis.Sato, Michio; Winter, Jaclyn M; Kishimoto, Shinji; Noguchi, Hiroshi; Tang, Yi; Watanabe, KenjiOrganic letters.2016 Mar 18;26959241
Biosynthesis of the ?-nitro-containing cyclic tripeptide psychrophilin.Zhao, Muxun; Lin, Hsiao-Ching; Tang, YiThe Journal of antibiotics.2016 Jul;26956794
The use of (18)F-2-fluorodeoxyglucose (FDG) to label antibody fragments for immuno-PET of pancreatic cancer.Rashidian, Mohammad; Keliher, Edmund; Dougan, Michael; Juras, Patrick K; Cavallari, Marco; Wojtkiewicz, Gregory R; Jacobsen, Johanne; Edens, Jerre G; Tas, Jeroen M G; Victora, Gabriel; Weissleder, Ralph; Ploegh, HiddeACS central science.2015 Jun 24;26955657
Crystal structure of a substrate-engaged SecY protein-translocation channel.Li, Long; Park, Eunyong; Ling, JingJing; Ingram, Jessica; Ploegh, Hidde; Rapoport, Tom ANature.2016 Mar 17;26950603
Novel Dopamine Therapeutics for Cognitive Deficits in Schizophrenia.Arnsten, Amy F T; Girgis, Ragy R; Gray, David L; Mailman, Richard BBiological psychiatry.2016 Jan 18;26946382
Neurovascular and Immuno-Imaging: From Mechanisms to Therapies. Proceedings of the Inaugural Symposium.Akassoglou, Katerina; Agalliu, Dritan; Chang, Christopher J; Davalos, Dimitrios; Grutzendler, Jaime; Hillman, Elizabeth M C; Khakh, Baljit S; Kleinfeld, David; McGavern, Dorian B; Nelson, Sarah J; Zlokovic, Berislav VFrontiers in neuroscience.2016;26941593
Opsin spectral sensitivity determines the effectiveness of optogenetic termination of ventricular fibrillation in the human heart: A simulation study.Karathanos, Thomas V; Bayer, Jason D; Wang, Dafang; Boyle, Patrick M; Trayanova, Natalia AThe Journal of physiology.2016 Mar 4;26941055
Wireless Cortical Brain-Machine Interface for Whole-Body Navigation in Primates.Rajangam, Sankaranarayani; Tseng, Po-He; Yin, Allen; Lehew, Gary; Schwarz, David; Lebedev, Mikhail A; Nicolelis, Miguel A LScientific reports.2016;26938468
Assembly and operation of the autopatcher for automated intracellular neural recording in vivo.Kodandaramaiah, Suhasa B; Holst, Gregory L; Wickersham, Ian R; Singer, Annabelle C; Franzesi, Giovanni Talei; McKinnon, Michael L; Forest, Craig R; Boyden, Edward SNature protocols.2016 Apr;26938115
UVnovo: A de Novo Sequencing Algorithm Using Single Series of Fragment Ions via Chromophore Tagging and 351 nm Ultraviolet Photodissociation Mass Spectrometry.Robotham, Scott A; Horton, Andrew P; Cannon, Joe R; Cotham, Victoria C; Marcotte, Edward M; Brodbelt, Jennifer SAnalytical chemistry.2016 Apr 5;26938041
An automatic experimental apparatus to study arm reaching in New World monkeys.Yin, Allen; An, Jehi; Lehew, Gary; Lebedev, Mikhail A; Nicolelis, Miguel A LJournal of neuroscience methods.2016 May 1;26928257
Intravenous immune globulin suppresses angiogenesis in mice and humans.Yasuma, Reo; Cicatiello, Valeria; Mizutani, Takeshi; Tudisco, Laura; Kim, Younghee; Tarallo, Valeria; Bogdanovich, Sasha; Hirano, Yoshio; Kerur, Nagaraj; Li, Shengjian; Yasuma, Tetsuhiro; Fowler, Benjamin J; Wright, Charles B; Apicella, Ivana; Greco, Adelaide; Brunetti, Arturo; Ambati, Balamurali K; Helmers, Sevim Barbasso; Lundberg, Ingrid E; Viklicky, Ondrej; Leusen, Jeanette Hw; Verbeek, J Sjef; Gelfand, Bradley D; Bastos-Carvalho, Ana; De Falco, Sandro; Ambati, JayakrishnaSignal transduction and targeted therapy.2016;26925256
Alzheimer's Disease Risk Polymorphisms Regulate Gene Expression in the ZCWPW1 and the CELF1 Loci.Karch, Celeste M; Ezerskiy, Lubov A; Bertelsen, Sarah; Alzheimer?s Disease Genetics Consortium (ADGC); Goate, Alison MPloS one.2016;26919393
Human IgG1 antibodies suppress angiogenesis in a target-independent manner.Bogdanovich, Sasha; Kim, Younghee; Mizutani, Takeshi; Yasuma, Reo; Tudisco, Laura; Cicatiello, Valeria; Bastos-Carvalho, Ana; Kerur, Nagaraj; Hirano, Yoshio; Baffi, Judit Z; Tarallo, Valeria; Li, Shengjian; Yasuma, Tetsuhiro; Arpitha, Parthasarathy; Fowler, Benjamin J; Wright, Charles B; Apicella, Ivana; Greco, Adelaide; Brunetti, Arturo; Ruvo, Menotti; Sandomenico, Annamaria; Nozaki, Miho; Ijima, Ryo; Kaneko, Hiroki; Ogura, Yuichiro; Terasaki, Hiroko; Ambati, Balamurali K; Leusen, Jeanette Hw; Langdon, Wallace Y; Clark, Michael R; Armour, Kathryn L; Bruhns, Pierre; Verbeek, J Sjef; Gelfand, Bradley D; De Falco, Sandro; Ambati, JayakrishnaSignal transduction and targeted therapy.2016;26918197
Association of Left Atrial Local Conduction Velocity With Late Gadolinium Enhancement on Cardiac Magnetic Resonance in Patients With Atrial Fibrillation.Fukumoto, Kotaro; Habibi, Mohammadali; Ipek, Esra Gucuk; Zahid, Sohail; Khurram, Irfan M; Zimmerman, Stefan L; Zipunnikov, Vadim; Spragg, David; Ashikaga, Hiroshi; Trayanova, Natalia; Tomaselli, Gordon F; Rickard, John; Marine, Joseph E; Berger, Ronald D;Circulation. Arrhythmia and electrophysiology.2016 Mar;26917814
Hypoxia as a therapy for mitochondrial disease.Jain, Isha H; Zazzeron, Luca; Goli, Rahul; Alexa, Kristen; Schatzman-Bone, Stephanie; Dhillon, Harveen; Goldberger, Olga; Peng, Jun; Shalem, Ophir; Sanjana, Neville E; Zhang, Feng; Goessling, Wolfram; Zapol, Warren M; Mootha, Vamsi KScience (New York, N.Y.).2016 Apr 1;26917594
Embedding a Panoramic Representation of Infrared Light in the Adult Rat Somatosensory Cortex through a Sensory Neuroprosthesis.Hartmann, Konstantin; Thomson, Eric E; Zea, Ivan; Yun, Richy; Mullen, Peter; Canarick, Jay; Huh, Albert; Nicolelis, Miguel A LThe Journal of neuroscience : the official journal of the Society for Neuroscience.2016 Feb 24;26911689
Temporal modulation of collective cell behavior controls vascular network topology.Kur, Esther; Kim, Jiha; Tata, Aleksandra; Comin, Cesar H; Harrington, Kyle I; Costa, Luciano da F; Bentley, Katie; Gu, ChenghuaeLife.2016 Feb 24;26910011
moco: Fast Motion Correction for Calcium Imaging.Dubbs, Alexander; Guevara, James; Yuste, RafaelFrontiers in neuroinformatics.2016;26909035
Quantitative Multiscale Cell Imaging in Controlled 3D Microenvironments.Welf, Erik S; Driscoll, Meghan K; Dean, Kevin M; Schäfer, Claudia; Chu, Jun; Davidson, Michael W; Lin, Michael Z; Danuser, Gaudenz; Fiolka, RetoDevelopmental cell.2016 Feb 22;462-7526906741
Probing the Complexities of Astrocyte Calcium Signaling.Shigetomi, Eiji; Patel, Sandip; Khakh, Baljit STrends in cell biology.2016 Feb 16;26896246
Intermittent drivers anchoring to structural heterogeneities as a major pathophysiological mechanism of human persistent atrial fibrillation.Haissaguerre, Michel; Shah, Ashok J; Cochet, Hubert; Hocini, Meleze; Dubois, Remi; Efimov, Igor; Vigmond, Edward; Bernus, Olivier; Trayanova, NataliaThe Journal of physiology.2016 May 1;26890861
Membrane Potential Dynamics of CA1 Pyramidal Neurons during Hippocampal Ripples in Awake Mice.Hulse, Brad K; Moreaux, Laurent C; Lubenov, Evgueniy V; Siapas, Athanassios GNeuron.2016 Feb 17;800-1326889811
Evaluating Public Health Interventions: 2. Stepping Up to Routine Public Health Evaluation With the Stepped Wedge Design.Spiegelman, DonnaAmerican journal of public health.2016 Mar;26885961
Photoacoustic microscopy of arteriovenous shunts and blood diffusion in early-stage tumors.Yeh, Chenghung; Liang, Jinyang; Zhou, Yong; Hu, Song; Sohn, Rebecca E; Arbeit, Jeffrey M; Wang, Lihong VJournal of biomedical optics.2016 Feb;26882446
Structure and Engineering of Francisella novicida Cas9.Hirano, Hisato; Gootenberg, Jonathan S; Horii, Takuro; Abudayyeh, Omar O; Kimura, Mika; Hsu, Patrick D; Nakane, Takanori; Ishitani, Ryuichiro; Hatada, Izuho; Zhang, Feng; Nishimasu, Hiroshi; Nureki, OsamuCell.2016 Feb 25;26875867
Regenerative Medicine: Potential Mechanisms of Cardiac Recovery in Takotsubo Cardiomyopathy.Chang, Andrew Y; Kittle, Jessie T; Wu, Sean MCurrent treatment options in cardiovascular medicine.2016 Mar;26874708
Photoacoustic elastography.Hai, Pengfei; Yao, Junjie; Li, Guo; Li, Chiye; Wang, Lihong VOptics letters.2016 Feb 15;26872173
Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes.Phanse, Sadhna; Wan, Cuihong; Borgeson, Blake; Tu, Fan; Drew, Kevin; Clark, Greg; Xiong, Xuejian; Kagan, Olga; Kwan, Julian; Bezginov, Alexandr; Chessman, Kyle; Pal, Swati; Cromar, Graham; Papoulas, Ophelia; Ni, Zuyao; Boutz, Daniel R; Stoilova, Snejana; Data in brief.2016 Mar;26870755
Cytosolic NADH-NAD+ redox visualized in brain slices by two-photon fluorescence lifetime biosensor imaging.Mongeon, Rebecca; Venkatachalam, Veena; Yellen, GaryAntioxidants & redox signaling.2016 Feb 9;26857245
Saccharomyces cerevisiae as a tool for mining, studying and engineering fungal polyketide synthases.Bond, Carly; Tang, Yi; Li, LiFungal genetics and biology : FG & B.2016 Feb 2;26850128
Clostridium difficile associated risk of death score (CARDS): a novel severity score to predict mortality among hospitalised patients with C. difficile infection.Kassam, Z; Cribb Fabersunne, C; Smith, M B; Alm, E J; Kaplan, G G; Nguyen, G C; Ananthakrishnan, A NAlimentary pharmacology & therapeutics.2016 Mar;26849527
Computational models of heart disease.Smith, Nic; Trayanova, NataliaDrug discovery today. Disease models.2014;2-Jan26843884
On the Structure of Neuronal Population Activity under Fluctuations in Attentional State.Ecker, Alexander S; Denfield, George H; Bethge, Matthias; Tolias, Andreas SThe Journal of neuroscience : the official journal of the Society for Neuroscience.2016 Feb 3;26843656
Structurally Defined ?MHC-II Nanobody-Drug Conjugates: A Therapeutic and Imaging System for B-Cell Lymphoma.Fang, Tao; Duarte, Joao N; Ling, Jingjing; Li, Zeyang; Guzman, Jonathan S; Ploegh, Hidde LAngewandte Chemie (International ed. in English).2016 Feb 12;26840214
Animal models of osteoarthritis: classification, update, and measurement of outcomes.Kuyinu, Emmanuel L; Narayanan, Ganesh; Nair, Lakshmi S; Laurencin, Cato TJournal of orthopaedic surgery and research.2016;26837951
Precisely parameterized experimental and computational models of tissue organization.Molitoris, Jared M; Paliwal, Saurabh; Sekar, Rajesh B; Blake, Robert; Park, JinSeok; Trayanova, Natalia A; Tung, Leslie; Levchenko, AndreIntegrative biology : quantitative biosciences from nano to macro.2016 Feb;26822672
Genes with monoallelic expression contribute disproportionately to genetic diversity in humans.Savova, Virginia; Chun, Sung; Sohail, Mashaal; McCole, Ruth B; Witwicki, Robert; Gai, Lisa; Lenz, Tobias L; Wu, C-ting; Sunyaev, Shamil R; Gimelbrant, Alexander ANature genetics.2016 Mar;26808112
Neural Circuits Underlying Visually Evoked Escapes in Larval Zebrafish.Dunn, Timothy W; Gebhardt, Christoph; Naumann, Eva A; Riegler, Clemens; Ahrens, Misha B; Engert, Florian; Del Bene, FilippoNeuron.2016 Feb 3;613-2826804997
Production of New Cladosporin Analogues by Reconstitution of the Polyketide Synthases Responsible for the Biosynthesis of this Antimalarial Agent.Cochrane, Rachel V K; Sanichar, Randy; Lambkin, Gareth R; Reiz, Béla; Xu, Wei; Tang, Yi; Vederas, John CAngewandte Chemie (International ed. in English).2016 Jan 11;26783060
Whole-brain activity mapping onto a zebrafish brain atlas.Randlett, Owen; Wee, Caroline L; Naumann, Eva A; Nnaemeka, Onyeka; Schoppik, David; Fitzgerald, James E; Portugues, Ruben; Lacoste, Alix M B; Riegler, Clemens; Engert, Florian; Schier, Alexander FNature methods.2015 Nov;1039-4626778924
Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data.Pnevmatikakis, Eftychios A; Soudry, Daniel; Gao, Yuanjun; Machado, Timothy A; Merel, Josh; Pfau, David; Reardon, Thomas; Mu, Yu; Lacefield, Clay; Yang, Weijian; Ahrens, Misha; Bruno, Randy; Jessell, Thomas M; Peterka, Darcy S; Yuste, Rafael; Paninski, LiamNeuron.2016 Jan 20;26774160
Simultaneous Multi-plane Imaging of Neural Circuits.Yang, Weijian; Miller, Jae-Eun Kang; Carrillo-Reid, Luis; Pnevmatikakis, Eftychios; Paninski, Liam; Yuste, Rafael; Peterka, Darcy SNeuron.2016 Jan 20;269-8426774159
Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin.Snyder, Matthew W; Kircher, Martin; Hill, Andrew J; Daza, Riza M; Shendure, JayCell.2016 Jan 14;57-6826771485
Super-resolution imaging reveals distinct chromatin folding for different epigenetic states.Boettiger, Alistair N; Bintu, Bogdan; Moffitt, Jeffrey R; Wang, Siyuan; Beliveau, Brian J; Fudenberg, Geoffrey; Imakaev, Maxim; Mirny, Leonid A; Wu, Chao-ting; Zhuang, XiaoweiNature.2016 Jan 21;26760202
Computational discovery of pathway-level genetic vulnerabilities in non-small-cell lung cancer.Young, Jonathan H; Peyton, Michael; Seok Kim, Hyun; McMillan, Elizabeth; Minna, John D; White, Michael A; Marcotte, Edward MBioinformatics (Oxford, England).2016 May 1;26755624
Identification and Optimization of Anthranilic Acid Based Inhibitors of Replication Protein?A.Patrone, James D; Pelz, Nicholas F; Bates, Brittney S; Souza-Fagundes, Elaine M; Vangamudi, Bhavatarini; Camper, Demarco V; Kuznetsov, Alexey G; Browning, Carrie F; Feldkamp, Michael D; Frank, Andreas O; Gilston, Benjamin A; Olejniczak, Edward T; Rossanese, Olivia W; Waterson, Alex G; Chazin, Walter J; Fesik, Stephen WChemMedChem.2016 Jan 8;26748787
Targeting Prefrontal Cortical Systems for Drug Development: Potential Therapies for Cognitive Disorders.Arnsten, Amy F T; Wang, MinAnnual review of pharmacology and toxicology.2016;26738476
Myocardial Infarct Segmentation From Magnetic Resonance Images for Personalized Modeling of Cardiac Electrophysiology.Ukwatta, Eranga; Arevalo, Hermenegild; Li, Kristina; Yuan, Jing; Qiu, Wu; Malamas, Peter; Wu, Katherine C; Trayanova, Natalia A; Vadakkumpadan, FijoyIEEE transactions on medical imaging.2016 Jun;26731693
A dual fluorescent reporter for the investigation of methionine mistranslation in live cells.Gomes, Ana Cristina; Kordala, Anna J; Strack, Rita; Wang, Xiaoyun; Geslain, Renaud; Delaney, Kamila; Clark, Wesley C; Keenan, Robert; Pan, TaoRNA (New York, N.Y.).2016 Mar;26729921
Rate-dependent force, intracellular calcium, and action potential voltage alternans are modulated by sarcomere length and heart failure induced-remodeling of thin filament regulation in human heart failure: A myocyte modeling study.Zile, Melanie A; Trayanova, Natalia AProgress in biophysics and molecular biology.2015 Dec 25;26724571
In vivo gene editing in dystrophic mouse muscle and muscle stem cells.Tabebordbar, Mohammadsharif; Zhu, Kexian; Cheng, Jason K W; Chew, Wei Leong; Widrick, Jeffrey J; Yan, Winston X; Maesner, Claire; Wu, Elizabeth Y; Xiao, Ru; Ran, F Ann; Cong, Le; Zhang, Feng; Vandenberghe, Luk H; Church, George M; Wagers, Amy JScience (New York, N.Y.).2016 Jan 22;407-1126721686
Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals.Sharma, Upasna; Conine, Colin C; Shea, Jeremy M; Boskovic, Ana; Derr, Alan G; Bing, Xin Y; Belleannee, Clemence; Kucukural, Alper; Serra, Ryan W; Sun, Fengyun; Song, Lina; Carone, Benjamin R; Ricci, Emiliano P; Li, Xin Z; Fauquier, Lucas; Moore, Melissa JScience (New York, N.Y.).2016 Jan 22;26721685
In vivo genome editing improves muscle function in a mouse model of Duchenne muscular dystrophy.Nelson, Christopher E; Hakim, Chady H; Ousterout, David G; Thakore, Pratiksha I; Moreb, Eirik A; Castellanos Rivera, Ruth M; Madhavan, Sarina; Pan, Xiufang; Ran, F Ann; Yan, Winston X; Asokan, Aravind; Zhang, Feng; Duan, Dongsheng; Gersbach, Charles AScience (New York, N.Y.).2016 Jan 22;403-726721684
Photoacoustic tomography of vascular compliance in humans.Hai, Pengfei; Zhou, Yong; Liang, Jinyang; Li, Chiye; Wang, Lihong VJournal of biomedical optics.2015;26720875
In vivo photoacoustic tomography of myoglobin oxygen saturation.Lin, Li; Yao, Junjie; Li, Lei; Wang, Lihong VJournal of biomedical optics.2016 Jun;26719943
Genetic and Epigenetic Variation, but Not Diet, Shape the Sperm Methylome.Shea, Jeremy M; Serra, Ryan W; Carone, Benjamin R; Shulha, Hennady P; Kucukural, Alper; Ziller, Michael J; Vallaster, Markus P; Gu, Hongcang; Tapper, Andrew R; Gardner, Paul D; Meissner, Alexander; Garber, Manuel; Rando, Oliver JDevelopmental cell.2015 Dec 21;26702833
Close-Packed Silicon Microelectrodes for Scalable Spatially Oversampled Neural Recording.Scholvin, Jorg; Kinney, Justin P; Bernstein, Jacob G; Moore-Kochlacs, Caroline; Kopell, Nancy; Fonstad, Clifton G; Boyden, Edward SIEEE transactions on bio-medical engineering.2016 Jan;120-3026699649
Electrophysiological, transcriptomic and morphologic profiling of single neurons using Patch-seq.Cadwell, Cathryn R; Palasantza, Athanasia; Jiang, Xiaolong; Berens, Philipp; Deng, Qiaolin; Yilmaz, Marlene; Reimer, Jacob; Shen, Shan; Bethge, Matthias; Tolias, Kimberley F; Sandberg, Rickard; Tolias, Andreas SNature biotechnology.2016 Feb;26689543
Mice with Shank3 Mutations Associated with ASD and Schizophrenia Display Both Shared and Distinct Defects.Zhou, Yang; Kaiser, Tobias; Monteiro, Patrícia; Zhang, Xiangyu; Van der Goes, Marie S; Wang, Dongqing; Barak, Boaz; Zeng, Menglong; Li, Chenchen; Lu, Congyi; Wells, Michael; Amaya, Aldo; Nguyen, Shannon; Lewis, Michael; Sanjana, Neville; Zhou, Yongdi; ZhaNeuron.2016 Jan 6;26687841
Cell-Specific Transcriptional Profiling of Ciliated Sensory Neurons Reveals Regulators of Behavior and Extracellular Vesicle Biogenesis.Wang, Juan; Kaletsky, Rachel; Silva, Malan; Williams, April; Haas, Leonard A; Androwski, Rebecca J; Landis, Jessica N; Patrick, Cory; Rashid, Alina; Santiago-Martinez, Dianaliz; Gravato-Nobre, Maria; Hodgkin, Jonathan; Hall, David H; Murphy, Coleen T; Barr, Maureen MCurrent biology : CB.2015 Dec 21;26687621
The C. elegans adult neuronal IIS/FOXO transcriptome reveals adult phenotype regulators.Kaletsky, Rachel; Lakhina, Vanisha; Arey, Rachel; Williams, April; Landis, Jessica; Ashraf, Jasmine; Murphy, Coleen TNature.2016 Jan 7;26675724
Applications of CRISPR-Cas systems in neuroscience.Heidenreich, Matthias; Zhang, FengNature reviews. Neuroscience.2016 Jan;26656253
Long-term neural and physiological phenotyping of a single human.Poldrack, Russell A; Laumann, Timothy O; Koyejo, Oluwasanmi; Gregory, Brenda; Hover, Ashleigh; Chen, Mei-Yen; Gorgolewski, Krzysztof J; Luci, Jeffrey; Joo, Sung Jun; Boyd, Ryan L; Hunicke-Smith, Scott; Simpson, Zack Booth; Caven, Thomas; Sochat, Vanessa; Nature communications.2015;26648521
Olfactory sensory neurons transiently express multiple olfactory receptors during development.Tan, Longzhi; Li, Qian; Xie, X SunneyMolecular systems biology.2015 Dec;26646940
The structure and timescales of heat perception in larval zebrafish.Haesemeyer, Martin; Robson, Drew N; Li, Jennifer M; Schier, Alexander F; Engert, FlorianCell systems.2015 Nov 25;338-34826640823
Systematic comparison of variant calling pipelines using gold standard personal exome variants.Hwang, Sohyun; Kim, Eiru; Lee, Insuk; Marcotte, Edward MScientific reports.2015;26639839
The African Turquoise Killifish Genome Provides Insights into Evolution and Genetic Architecture of Lifespan.Valenzano, Dario Riccardo; Benayoun, Bérénice A; Singh, Param Priya; Zhang, Elisa; Etter, Paul D; Hu, Chi-Kuo; Clément-Ziza, Mathieu; Willemsen, David; Cui, Rongfeng; Harel, Itamar; Machado, Ben E; Yee, Muh-Ching; Sharp, Sabrina C; Bustamante, Carlos D; Beyer, Andreas; Johnson, Eric A; Brunet, AnneCell.2015 Dec 3;1539-5426638078
Image-based Reconstruction of 3D Myocardial Infarct Geometry for Patient Specific Applications.Ukwatta, Eranga; Rajchl, Martin; White, James; Pashakhanloo, Farhad; Herzka, Daniel A; McVeigh, Elliot; Lardo, Albert C; Trayanova, Natalia; Vadakkumpadan, FijoyProceedings of SPIE--the International Society for Optical Engineering.2015 Feb 21;26633913
Enzyme-Mediated Modification of Single-Domain Antibodies for Imaging Modalities with Different Characteristics.Rashidian, Mohammad; Wang, Lu; Edens, Jerre G; Jacobsen, Johanne T; Hossain, Intekhab; Wang, Qifan; Victora, Gabriel D; Vasdev, Neil; Ploegh, Hidde; Liang, Steven HAngewandte Chemie (International ed. in English).2016 Jan 11;26630549
Understanding Programming of Fungal Iterative Polyketide Synthases: The Biochemical Basis for Regioselectivity by the Methyltransferase Domain in the Lovastatin Megasynthase.Cacho, Ralph A; Thuss, Justin; Xu, Wei; Sanichar, Randy; Gao, Zhizeng; Nguyen, Allison; Vederas, John C; Tang, YiJournal of the American Chemical Society.2015 Dec 23;26630357
Rationally engineered Cas9 nucleases with improved specificity.Slaymaker, Ian M; Gao, Linyi; Zetsche, Bernd; Scott, David A; Yan, Winston X; Zhang, FengScience (New York, N.Y.).2016 Jan 1;84-826628643
How computer simulations of the human heart can improve anti-arrhythmia therapy.Trayanova, Natalia A; Chang, Kelly CThe Journal of physiology.2016 May 1;26621489
Principles of connectivity among morphologically defined cell types in adult neocortex.Jiang, Xiaolong; Shen, Shan; Cadwell, Cathryn R; Berens, Philipp; Sinz, Fabian; Ecker, Alexander S; Patel, Saumil; Tolias, Andreas SScience (New York, N.Y.).2015 Nov 27;aac946226612957
Controlling AAV Tropism in the Nervous System with Natural and Engineered Capsids.Castle, Michael J; Turunen, Heikki T; Vandenberghe, Luk H; Wolfe, John HMethods in molecular biology (Clifton, N.J.).2016;133-4926611584
A minimal fate-selection switch.Weinberger, Leor SCurrent opinion in cell biology.2015 Dec;26611210
An Autogenously Regulated Expression System for Gene Therapeutic Ocular Applications.Sochor, Matthew A; Vasireddy, Vidyullatha; Drivas, Theodore G; Wojno, Adam; Doung, Thu; Shpylchak, Ivan; Bennicelli, Jeannette; Chung, Daniel; Bennett, Jean; Lewis, MitchellScientific reports.2015 Nov 24;26597678
Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems.Shmakov, Sergey; Abudayyeh, Omar O; Makarova, Kira S; Wolf, Yuri I; Gootenberg, Jonathan S; Semenova, Ekaterina; Minakhin, Leonid; Joung, Julia; Konermann, Silvana; Severinov, Konstantin; Zhang, Feng; Koonin, Eugene VMolecular cell.2015 Nov 5;385-9726593719
Theory in Biology: Figure 1 or Figure 7?Phillips, RobTrends in cell biology.2015 Dec;723-926584768
Scalable amplification of strand subsets from chip-synthesized oligonucleotide libraries.Schmidt, Thorsten L; Beliveau, Brian J; Uca, Yavuz O; Theilmann, Mark; Da Cruz, Felipe; Wu, Chao-Ting; Shih, William MNature communications.2015;863426567534
Bactericidal Antibiotics Induce Toxic Metabolic Perturbations that Lead to Cellular Damage.Belenky, Peter; Ye, Jonathan D; Porter, Caroline B M; Cohen, Nadia R; Lobritz, Michael A; Ferrante, Thomas; Jain, Saloni; Korry, Benjamin J; Schwarz, Eric G; Walker, Graham C; Collins, James JCell reports.2015 Nov 3;968-8026565910
Defining Resistance and Tolerance to Cancer.Dillman, Adler R; Schneider, David SCell reports.2015 Nov 3;884-726565901
Variation in Taxonomic Composition of the Fecal Microbiota in an Inbred Mouse Strain across Individuals and Time.Hoy, Yana Emmy; Bik, Elisabeth M; Lawley, Trevor D; Holmes, Susan P; Monack, Denise M; Theriot, Julie A; Relman, David APloS one.2015;e014282526565698
Evaluating Public Health Interventions: 1. Examples, Definitions, and a Personal Note.Spiegelman, DonnaAmerican journal of public health.2016 Jan;26562122
Multiscale photoacoustic tomography using reversibly switchable bacterial phytochrome as a near-infrared photochromic probe.Yao, Junjie; Kaberniuk, Andrii A; Li, Lei; Shcherbakova, Daria M; Zhang, Ruiying; Wang, Lidai; Li, Guo; Verkhusha, Vladislav V; Wang, Lihong VNature methods.2016 Jan;67-7326550774
Convergence and Stability of a Class of Iteratively Re-weighted Least Squares Algorithms for Sparse Signal Recovery in the Presence of Noise.Babadi, Behtash; Ba, Demba; Purdon, Patrick L; Brown, Emery NIEEE transactions on signal processing : a publication of the IEEE Signal Processing Society.2013 Oct 30;183-19526549965
Convergent evolution of marine mammals is associated with distinct substitutions in common genes.Zhou, Xuming; Seim, Inge; Gladyshev, Vadim NScientific reports.2015;1655026549748
Organization of the Mammalian Ionome According to Organ Origin, Lineage Specialization, and Longevity.Ma, Siming; Lee, Sang-Goo; Kim, Eun Bae; Park, Thomas J; Seluanov, Andrei; Gorbunova, Vera; Buffenstein, Rochelle; Seravalli, Javier; Gladyshev, Vadim NCell reports.2015 Nov 17;1319-2626549444
Lift NIH restrictions on chimera research.Sharma, Arun; Sebastiano, Vittorio; Scott, Christopher T; Magnus, David; Koyano-Nakagawa, Naoko; Garry, Daniel J; Witte, Owen N; Nakauchi, Hiromitsu; Wu, Joseph C; Weissman, Irving L; Wu, Sean MScience (New York, N.Y.).2015 Nov 6;26542560
MouseNet v2: a database of gene networks for studying the laboratory mouse and eight other model vertebrates.Kim, Eiru; Hwang, Sohyun; Kim, Hyojin; Shim, Hongseok; Kang, Byunghee; Yang, Sunmo; Shim, Jae Ho; Shin, Seung Yeon; Marcotte, Edward M; Lee, InsukNucleic acids research.2016 Jan 4;26527726
Bessel-beam Grueneisen relaxation photoacoustic microscopy with extended depth of field.Shi, Junhui; Wang, Lidai; Noordam, Cedric; Wang, Lihong VJournal of biomedical optics.2015 Nov;11600226524679
Broadening the targeting range of Staphylococcus aureus CRISPR-Cas9 by modifying PAM recognition.Kleinstiver, Benjamin P; Prew, Michelle S; Tsai, Shengdar Q; Nguyen, Nhu T; Topkar, Ved V; Zheng, Zongli; Joung, J KeithNature biotechnology.2015 Dec;1293-129826524662
Fixed single-cell transcriptomic characterization of human radial glial diversity.Thomsen, Elliot R; Mich, John K; Yao, Zizhen; Hodge, Rebecca D; Doyle, Adele M; Jang, Sumin; Shehata, Soraya I; Nelson, Angelique M; Shapovalova, Nadiya V; Levi, Boaz P; Ramanathan, SharadNature methods.2016 Jan;87-9326524239
Cuffing-based photoacoustic flowmetry in humans in the optical diffusive regime.Zhou, Yong; Liang, Jinyang; Wang, Lihong VJournal of biophotonics.2016 Mar;208-1226515158
Dual-Modality Photoacoustic and Ultrasound Imaging System for Noninvasive Sentinel Lymph Node Detection in Patients with Breast Cancer.Garcia-Uribe, Alejandro; Erpelding, Todd N; Krumholz, Arie; Ke, Haixin; Maslov, Konstantin; Appleton, Catherine; Margenthaler, Julie A; Wang, Lihong VScientific reports.2015;1574826510774
Intrinsic Antimicrobial Resistance Determinants in the Superbug Pseudomonas aeruginosa.Murray, Justine L; Kwon, Taejoon; Marcotte, Edward M; Whiteley, MarvinmBio.2015;26507235
Encrypted Three-dimensional Dynamic Imaging using Snapshot Time-of-flight Compressed Ultrafast Photography.Liang, Jinyang; Gao, Liang; Hai, Pengfei; Li, Chiye; Wang, Lihong VScientific reports.2015;1550426503834
Can Sibling Sex Ratios Be Used as a Valid Test for the Prenatal Androgen Hypothesis of Autism Spectrum Disorders?Cheslack-Postava, Keely; Susser, Ezra; Liu, Kayuet; Bearman, Peter SPloS one.2015;e014133826495967
Comparison of 10,11-Dehydrocurvularin Polyketide Synthases from Alternaria cinerariae and Aspergillus terreus Highlights Key Structural Motifs.Cochrane, Rachel V K; Gao, Zhizeng; Lambkin, Gareth R; Xu, Wei; Winter, Jaclyn M; Marcus, Sandra L; Tang, Yi; Vederas, John CChembiochem : a European journal of chemical biology.2015 Nov;26493380
Efficient delivery of nuclease proteins for genome editing in human stem cells and primary cells.Liu, Jia; Gaj, Thomas; Yang, Yifeng; Wang, Nan; Shui, Sailan; Kim, Sojung; Kanchiswamy, Chidananda Nagamangala; Kim, Jin-Soo; Barbas 3rd, Carlos FNature protocols.2015 Nov;1842-5926492140
On testing neural network models.Yuste, RafaelNature reviews. Neuroscience.2015 Dec;26486185
Poreless eggshells.Lin, Haifan; Matzuk, Martin MThe Journal of clinical investigation.2015 Nov 2;4005-726485282
A National Network of Neurotechnology Centers for the BRAIN Initiative.Alivisatos, A Paul; Chun, Miyoung; Church, George M; Greenspan, Ralph J; Roukes, Michael L; Yuste, RafaelNeuron.2015 Nov 4;26481036
Graphene Oxide Nanosheets Modified with Single-Domain Antibodies for Rapid and Efficient Capture of Cells.Chen, Guan-Yu; Li, Zeyang; Theile, Christopher S; Bardhan, Neelkanth M; Kumar, Priyank V; Duarte, Joao N; Maruyama, Takeshi; Rashidfarrokh, Ali; Belcher, Angela M; Ploegh, Hidde LChemistry (Weinheim an der Bergstrasse, Germany).2015 Nov 23;26472062
Seeing Through the Surface: Non-invasive Characterization of Biomaterial-Tissue Interactions Using Photoacoustic Microscopy.Zhang, Yu Shrike; Wang, Lihong V; Xia, YounanAnnals of biomedical engineering.2015 Oct 15;26471785
Discovery of Unclustered Fungal Indole Diterpene Biosynthetic Pathways through Combinatorial Pathway Reassembly in Engineered Yeast.Tang, Man-Cheng; Lin, Hsiao-Ching; Li, Dehai; Zou, Yi; Li, Jian; Xu, Wei; Cacho, Ralph A; Hillenmeyer, Maureen E; Garg, Neil K; Tang, YiJournal of the American Chemical Society.2015 Nov 4;13724-726469304
On the problem of boundaries and scaling for urban street networks.Masucci, A Paolo; Arcaute, Elsa; Hatna, Erez; Stanilov, Kiril; Batty, MichaelJournal of the Royal Society, Interface / the Royal Society.2015 Oct 6;2015076326468071
Common variants in DRD2 are associated with sleep duration: the CARe consortium.Cade, Brian E; Gottlieb, Daniel J; Lauderdale, Diane S; Bennett, David A; Buchman, Aron S; Buxbaum, Sarah G; De Jager, Philip L; Evans, Daniel S; Fülöp, Tibor; Gharib, Sina A; Johnson, W Craig; Kim, Hyun; Larkin, Emma K; Lee, Seung Ku; Lim, Andrew S; Punjabi, Naresh M; Shin, Chol; Stone, Katie L; Tranah, Gregory J; Weng, Jia; Yaffe, Kristine; Zee, Phyllis C; Patel, Sanjay R; Zhu, Xiaofeng; Redline, Susan; Saxena, RichaHuman molecular genetics.2016 Jan 1;167-7926464489
Efforts to make and apply humanized yeast.Laurent, Jon M; Young, Jonathan H; Kachroo, Aashiq H; Marcotte, Edward MBriefings in functional genomics.2016 Mar;26462863
Microbiota-Dependent Sequelae of Acute Infection Compromise Tissue-Specific Immunity.Fonseca, Denise Morais da; Hand, Timothy W; Han, Seong-Ji; Gerner, Michael Y; Glatman Zaretsky, Arielle; Byrd, Allyson L; Harrison, Oliver J; Ortiz, Alexandra M; Quinones, Mariam; Trinchieri, Giorgio; Brenchley, Jason M; Brodsky, Igor E; Germain, Ronald NCell.2015 Oct 8;26451485
Maternal Ube3a Loss Disrupts Sleep Homeostasis But Leaves Circadian Rhythmicity Largely Intact.Ehlen, J Christopher; Jones, Kelly A; Pinckney, Lennisha; Gray, Cloe L; Burette, Susan; Weinberg, Richard J; Evans, Jennifer A; Brager, Allison J; Zylka, Mark J; Paul, Ketema N; Philpot, Benjamin D; DeBruyne, Jason PThe Journal of neuroscience : the official journal of the Society for Neuroscience.2015 Oct 07;26446213
The molecular constituents of the blood-brain barrier.Chow, Brian Wai; Gu, ChenghuaTrends in neurosciences.2015 Oct;598-60826442694
A New MRI-Based Model of Heart Function with Coupled Hemodynamics and Application to Normal and Diseased Canine Left Ventricles.Choi, Young Joon; Constantino, Jason; Vedula, Vijay; Trayanova, Natalia; Mittal, RajatFrontiers in bioengineering and biotechnology.2015;26442254
Lipid Profiles and Signals for Long Life.Schroeder, Elizabeth A; Brunet, AnneTrends in endocrinology and metabolism: TEM.2015 Nov;589-9226439976
Drosophila melanogaster Natural Variation Affects Growth Dynamics of Infecting Listeria monocytogenes.Hotson, Alejandra Guzmán; Schneider, David SG3 (Bethesda, Md.).2015 Dec;26438294
Orthogonal gene knockout and activation with a catalytically active Cas9 nuclease.Dahlman, James E; Abudayyeh, Omar O; Joung, Julia; Gootenberg, Jonathan S; Zhang, Feng; Konermann, SilvanaNature biotechnology.2015 Nov;1159-6126436575
Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system.Zetsche, Bernd; Gootenberg, Jonathan S; Abudayyeh, Omar O; Slaymaker, Ian M; Makarova, Kira S; Essletzbichler, Patrick; Volz, Sara E; Joung, Julia; van der Oost, John; Regev, Aviv; Koonin, Eugene V; Zhang, FengCell.2015 Oct 22;759-7126422227
Cardioprotective Actions of TGF?RI Inhibition Through Stimulating Autocrine/Paracrine of Survivin and Inhibiting Wnt in Cardiac Progenitors.Ho, Yu-Sian; Tsai, Wan-Hsuan; Lin, Fen-Chiung; Huang, Wei-Pang; Lin, Lung-Chun; Wu, Sean M; Liu, Yu-Ru; Chen, Wen-PinStem cells (Dayton, Ohio).2015 Sep 29;26418219
Continuous Antigenic Stimulation of DO11.10 TCR Transgenic Mice in the Presence or Absence of IL-1?: Possible Implications for Mechanisms of T Cell Depletion in HIV Disease.Ladell, Kristin; Hazenberg, Mette D; Fitch, Mark; Emson, Claire; McEvoy-Hein Asgarian, Bridget K; Mold, Jeff E; Miller, Corey; Busch, Robert; Price, David A; Hellerstein, Marc K; McCune, Joseph MJournal of immunology (Baltimore, Md. : 1950).2015 Nov 1;4096-10526416271
Studying a Drug-like, RNA-Focused Small Molecule Library Identifies Compounds That Inhibit RNA Toxicity in Myotonic Dystrophy.Rzuczek, Suzanne G; Southern, Mark R; Disney, Matthew DACS chemical biology.2015 Dec 18;26414664
In Vivo Evaluation of Adipose-Derived Stromal Cells Delivered with a Nanofiber Scaffold for Tendon-to-Bone Repair.Lipner, Justin; Shen, Hua; Cavinatto, Leonardo; Liu, Wenying; Havlioglu, Necat; Xia, Younan; Galatz, Leesa M; Thomopoulos, StavrosTissue engineering. Part A.2015 Nov;2766-7426414599
Redesigning Recombinase Specificity for Safe Harbor Sites in the Human Genome.Wallen, Mark C; Gaj, Thomas; Barbas 3rd, Carlos FPloS one.2015;e013912326414179
AgRP Neurons Regulate Bone Mass.Kim, Jae Geun; Sun, Ben-Hua; Dietrich, Marcelo O; Koch, Marco; Yao, Gang-Qing; Diano, Sabrina; Insogna, Karl; Horvath, Tamas LCell reports.2015 Oct 6;14-Aug26411686
The DNA damage response induces inflammation and senescence by inhibiting autophagy of GATA4.Kang, Chanhee; Xu, Qikai; Martin, Timothy D; Li, Mamie Z; Demaria, Marco; Aron, Liviu; Lu, Tao; Yankner, Bruce A; Campisi, Judith; Elledge, Stephen JScience (New York, N.Y.).2015 Sep 25;aaa561226404840
Stress weakens prefrontal networks: molecular insults to higher cognition.Arnsten, Amy F TNature neuroscience.2015 Oct;1376-8526404712
Waking State: Rapid Variations Modulate Neural and Behavioral Responses.McGinley, Matthew J; Vinck, Martin; Reimer, Jacob; Batista-Brito, Renata; Zagha, Edward; Cadwell, Cathryn R; Tolias, Andreas S; Cardin, Jessica A; McCormick, David ANeuron.2015 Sep 23;1143-6126402600
CAUSEL: an epigenome- and genome-editing pipeline for establishing function of noncoding GWAS variants.Spisák, Sándor; Lawrenson, Kate; Fu, Yanfang; Csabai, István; Cottman, Rebecca T; Seo, Ji-Heui; Haiman, Christopher; Han, Ying; Lenci, Romina; Li, Qiyuan; Tisza, Viktória; Szállási, Zoltán; Herbert, Zachery T; Chabot, Matthew; Pomerantz, Mark; Solymosi, Norbert; GAME-ON/ELLIPSE Consortium; Gayther, Simon A; Joung, J Keith; Freedman, Matthew LNature medicine.2015 Nov;1357-6326398868
A note on ''Design and analysis of stepped wedge cluster randomized trials''.Liao, Xiaomei; Zhou, Xin; Spiegelman, DonnaContemporary clinical trials.2015 Nov;26394003
A direct-to-drive neural data acquisition system.Kinney, Justin P; Bernstein, Jacob G; Meyer, Andrew J; Barber, Jessica B; Bolivar, Marti; Newbold, Bryan; Scholvin, Jorg; Moore-Kochlacs, Caroline; Wentz, Christian T; Kopell, Nancy J; Boyden, Edward SFrontiers in neural circuits.2015;26388740
Optimization of yeast-based production of medicinal protoberberine alkaloids.Galanie, Stephanie; Smolke, Christina DMicrobial cell factories.2015;14426376732
BCL11A enhancer dissection by Cas9-mediated in situ saturating mutagenesis.Canver, Matthew C; Smith, Elenoe C; Sher, Falak; Pinello, Luca; Sanjana, Neville E; Shalem, Ophir; Chen, Diane D; Schupp, Patrick G; Vinjamur, Divya S; Garcia, Sara P; Luc, Sidinh; Kurita, Ryo; Nakamura, Yukio; Fujiwara, Yuko; Maeda, Takahiro; Yuan, Guo-Cheng; Zhang, Feng; Orkin, Stuart H; Bauer, Daniel ENature.2015 Nov 12;192-726375006
Epigenetic regulation of ageing: linking environmental inputs to genomic stability.Benayoun, Bérénice A; Pollina, Elizabeth A; Brunet, AnneNature reviews. Molecular cell biology.2015 Oct;593-61026373265
Involvement of Lipocalin-like CghA in Decalin-Forming Stereoselective Intramolecular [4+2] Cycloaddition.Sato, Michio; Yagishita, Fumitoshi; Mino, Takashi; Uchiyama, Nahoko; Patel, Ashay; Chooi, Yit-Heng; Goda, Yukihiro; Xu, Wei; Noguchi, Hiroshi; Yamamoto, Tsuyoshi; Hotta, Kinya; Houk, Kendall N; Tang, Yi; Watanabe, KenjiChembiochem : a European journal of chemical biology.2015 Nov;2294-826360642
In Vitro Screening and in Silico Modeling of RNA-Based Gene Expression Control.McKeague, Maureen; Wang, Yen-Hsiang; Smolke, Christina DACS chemical biology.2015 Nov 20;26359915
Mobile AMPARs are required for synaptic plasticity.Hoerndli, Frédéric J; Kallarackal, Angy J; Maricq, Andres VChannels (Austin, Tex.).2015;230-226359683
Panorama of ancient metazoan macromolecular complexes.Wan, Cuihong; Borgeson, Blake; Phanse, Sadhna; Tu, Fan; Drew, Kevin; Clark, Greg; Xiong, Xuejian; Kagan, Olga; Kwan, Julian; Bezginov, Alexandr; Chessman, Kyle; Pal, Swati; Cromar, Graham; Papoulas, Ophelia; Ni, Zuyao; Boutz, Daniel R; Stoilova, Snejana; Nature.2015 Sep 17;26344197
N(6)-Methyladenosine Modification in a Long Noncoding RNA Hairpin Predisposes Its Conformation to Protein Binding.Zhou, Katherine I; Parisien, Marc; Dai, Qing; Liu, Nian; Diatchenko, Luda; Sachleben, Joseph R; Pan, TaoJournal of molecular biology.2015 Sep 4;26343757
Efficient Biosynthesis of Fungal Polyketides Containing the Dioxabicyclo-octane Ring System.Mao, Xu-Ming; Zhan, Zha-Jun; Grayson, Matthew N; Tang, Man-Cheng; Xu, Wei; Li, Yong-Quan; Yin, Wen-Bing; Lin, Hsiao-Ching; Chooi, Yit-Heng; Houk, K N; Tang, YiJournal of the American Chemical Society.2015 Sep 23;11904-726340065
Applications of comparative evolution to human disease genetics.McWhite, Claire D; Liebeskind, Benjamin J; Marcotte, Edward MCurrent opinion in genetics & development.2015 Dec;26338499
Members Only: Hypoxia-Induced Cell-Cycle Activation in Cardiomyocytes.Sharma, Arun; Wu, Sean MCell metabolism.2015 Sep 1;365-626331604
Harnessing the Induction of Cardiomyocyte Proliferation for Cardiac Regenerative Medicine.Sharma, Arun; Zhang, Yuan; Wu, Sean MCurrent treatment options in cardiovascular medicine.2015 Oct;40426324824
Integrin Based Isolation Enables Purification of Murine Lineage Committed Cardiomyocytes.Tarnawski, Laura; Xian, Xiaojie; Monnerat, Gustavo; Macaulay, Iain C; Malan, Daniela; Borgman, Andrew; Wu, Sean M; Fleischmann, Bernd K; Jovinge, StefanPloS one.2015;e013588026323090
Crystal Structure of Staphylococcus aureus Cas9.Nishimasu, Hiroshi; Cong, Le; Yan, Winston X; Ran, F Ann; Zetsche, Bernd; Li, Yinqing; Kurabayashi, Arisa; Ishitani, Ryuichiro; Zhang, Feng; Nureki, OsamuCell.2015 Aug 27;1113-2626317473
Allosteric activation of apicomplexan calcium-dependent protein kinases.Ingram, Jessica R; Knockenhauer, Kevin E; Markus, Benedikt M; Mandelbaum, Joseph; Ramek, Alexander; Shan, Yibing; Shaw, David E; Schwartz, Thomas U; Ploegh, Hidde L; Lourido, SebastianProceedings of the National Academy of Sciences of the United States of America.2015 Sep 8;E4975-8426305940
Trajectories of cell-cycle progression from fixed cell populations.Gut, Gabriele; Tadmor, Michelle D; Pe'er, Dana; Pelkmans, Lucas; Liberali, PriscaNature methods.2015 Oct;26301842
Gold Nanomaterials at Work in Biomedicine.Yang, Xuan; Yang, Miaoxin; Pang, Bo; Vara, Madeline; Xia, YounanChemical reviews.2015 Oct 14;10410-8826293344
Structured Variability in Purkinje Cell Activity during Locomotion.Sauerbrei, Britton A; Lubenov, Evgueniy V; Siapas, Athanassios GNeuron.2015 Aug 19;840-5226291165
In reply.Purdon, Patrick L; Zhou, David W; Akeju, Oluwaseun; Brown, Emery NAnesthesiology.2015 Sep;725-826284863
Controlled Measurement and Comparative Analysis of Cellular Components in E. coli Reveals Broad Regulatory Changes in Response to Glucose Starvation.Houser, John R; Barnhart, Craig; Boutz, Daniel R; Carroll, Sean M; Dasgupta, Aurko; Michener, Joshua K; Needham, Brittany D; Papoulas, Ophelia; Sridhara, Viswanadham; Sydykova, Dariya K; Marx, Christopher J; Trent, M Stephen; Barrick, Jeffrey E; Marcotte,PLoS computational biology.2015 Aug;26275208
Clinical Electroencephalography for Anesthesiologists: Part I: Background and Basic Signatures.Purdon, Patrick L; Sampson, Aaron; Pavone, Kara J; Brown, Emery NAnesthesiology.2015 Aug 14;26275092
Complete biosynthesis of opioids in yeast.Galanie, Stephanie; Thodey, Kate; Trenchard, Isis J; Filsinger Interrante, Maria; Smolke, Christina DScience (New York, N.Y.).2015 Sep 4;1095-10026272907
Exposure to SIV in utero results in reduced viral loads and altered responsiveness to postnatal challenge.Baker, Chris A R; Swainson, Louise; Lin, Din L; Wong, Samson; Hartigan-O'Connor, Dennis J; Lifson, Jeffrey D; Tarantal, Alice F; McCune, Joseph MScience translational medicine.2015 Aug 12;300ra12526268312
A PK-PD model of ketamine-induced high-frequency oscillations.Flores, Francisco J; Ching, ShiNung; Hartnack, Katharine; Fath, Amanda B; Purdon, Patrick L; Wilson, Matthew A; Brown, Emery NJournal of neural engineering.2015 Oct;5600626268223
In vivo photoacoustic flowmetry at depths of the diffusive regime based on saline injection.Zhou, Yong; Poudel, Joemini; Li, Guo; Wang, Lihong VJournal of biomedical optics.2015 Aug;8700126267364
High-throughput cellular RNA device engineering.Townshend, Brent; Kennedy, Andrew B; Xiang, Joy S; Smolke, Christina DNature methods.2015 Oct;989-9426258292
An Autism-Linked Mutation Disables Phosphorylation Control of UBE3A.Yi, Jason J; Berrios, Janet; Newbern, Jason M; Snider, William D; Philpot, Benjamin D; Hahn, Klaus M; Zylka, Mark JCell.2015 Aug 13;795-80726255772
Fluorophore-Conjugated Holliday Junctions for Generating Super-Bright Antibodies and Antibody Fragments.Li, Zeyang; Theile, Christopher S; Chen, Guan-Yu; Bilate, Angelina M; Duarte, Joao N; Avalos, Ana M; Fang, Tao; Barberena, Roberto; Sato, Shuji; Ploegh, Hidde LAngewandte Chemie (International ed. in English).2015 Sep 28;26252716
Organization of the Mammalian Metabolome according to Organ Function, Lineage Specialization, and Longevity.Ma, Siming; Yim, Sun Hee; Lee, Sang-Goo; Kim, Eun Bae; Lee, Sang-Rae; Chang, Kyu-Tae; Buffenstein, Rochelle; Lewis, Kaitlyn N; Park, Thomas J; Miller, Richard A; Clish, Clary B; Gladyshev, Vadim NCell metabolism.2015 Aug 4;332-4326244935
Dysregulation of FMRP/mTOR Signaling Cascade in Hypoxic-Ischemic Injury of Premature Human Brain.Lechpammer, Mirna; Wintermark, Pia; Merry, Katherine M; Jackson, Michele C; Jantzie, Lauren L; Jensen, Frances EJournal of child neurology.2015 Aug 3;26239490
High-throughput determination of RNA structure by proximity ligation.Ramani, Vijay; Qiu, Ruolan; Shendure, JayNature biotechnology.2015 Sep;980-426237516
In Silico Reconstruction of the Viral Evolutionary Lineage Yields a Potent Gene Therapy Vector.Zinn, Eric; Pacouret, Simon; Khaychuk, Vadim; Turunen, Heikki T; Carvalho, Livia S; Andres-Mateos, Eva; Shah, Samiksha; Shelke, Rajani; Maurer, Anna C; Plovie, Eva; Xiao, Ru; Vandenberghe, Luk HCell reports.2015 Aug 11;1056-6826235624
Image-based reconstruction of three-dimensional myocardial infarct geometry for patient-specific modeling of cardiac electrophysiology.Ukwatta, Eranga; Arevalo, Hermenegild; Rajchl, Martin; White, James; Pashakhanloo, Farhad; Prakosa, Adityo; Herzka, Daniel A; McVeigh, Elliot; Lardo, Albert C; Trayanova, Natalia A; Vadakkumpadan, FijoyMedical physics.2015 Aug;26233186
PIKfyve mediates the motility of late endosomes and lysosomes in neuronal dendrites.Tsuruta, Fuminori; Dolmetsch, Ricardo ENeuroscience letters.2015 Jul 29;18-2326232680
Efficient and quantitative high-throughput tRNA sequencing.Zheng, Guanqun; Qin, Yidan; Clark, Wesley C; Dai, Qing; Yi, Chengqi; He, Chuan; Lambowitz, Alan M; Pan, TaoNature methods.2015 Sep;835-726214130
Chemoenzymatic syntheses of water-soluble lipid I fluorescent probes.Mitachi, Katsuhiko; Siricilla, Shajila; Klaic, Lada; Clemons Jr, William M; Kurosu, MichioTetrahedron letters.2015 Jun 3;3441-344626190869
A Genome-wide CRISPR Screen in Primary Immune Cells to Dissect Regulatory Networks.Parnas, Oren; Jovanovic, Marko; Eisenhaure, Thomas M; Herbst, Rebecca H; Dixit, Atray; Ye, Chun Jimmie; Przybylski, Dariusz; Platt, Randall J; Tirosh, Itay; Sanjana, Neville E; Shalem, Ophir; Satija, Rahul; Raychowdhury, Raktima; Mertins, Philipp; Carr, Steven A; Zhang, Feng; Hacohen, Nir; Regev, AvivCell.2015 Jul 30;675-8626189680
Plasticity of the human visual system after retinal gene therapy in patients with Leber's congenital amaurosis.Ashtari, Manzar; Zhang, Hui; Cook, Philip A; Cyckowski, Laura L; Shindler, Kenneth S; Marshall, Kathleen A; Aravand, Puya; Vossough, Arastoo; Gee, James C; Maguire, Albert M; Baker, Chris I; Bennett, JeanScience translational medicine.2015 Jul 15;296ra11026180100
CRISPR-Cas9: Prospects and Challenges.Zhang, FengHuman gene therapy.2015 Jul;26176430
Age-dependency of sevoflurane-induced electroencephalogram dynamics in children.Akeju, O; Pavone, K J; Thum, J A; Firth, P G; Westover, M B; Puglia, M; Shank, E S; Brown, E N; Purdon, P LBritish journal of anaesthesia.2015 Jul;i66-i7626174303
Ageing delays emergence from general anaesthesia in rats by increasing anaesthetic sensitivity in the brain.Chemali, J J; Kenny, J D; Olutola, O; Taylor, N E; Kimchi, E Y; Purdon, P L; Brown, E N; Solt, KBritish journal of anaesthesia.2015 Jul;i58-i6526174302
Biochemical and Structural Basis for Controlling Chemical Modularity in Fungal Polyketide Biosynthesis.Winter, Jaclyn M; Cascio, Duilio; Dietrich, David; Sato, Michio; Watanabe, Kenji; Sawaya, Michael R; Vederas, John C; Tang, YiJournal of the American Chemical Society.2015 Aug 12;9885-9326172141
Focal Points, Endogenous Processes, and Exogenous Shocks in the Autism Epidemic.Liu, Kayuet; Bearman, Peter SSociological methods & research.2015 May 1;272-30526166907
De novo production of the key branch point benzylisoquinoline alkaloid reticuline in yeast.Trenchard, Isis J; Siddiqui, Michael S; Thodey, Kate; Smolke, Christina DMetabolic engineering.2015 Jul 10;74-8326166409
Building an organic computing device with multiple interconnected brains.Pais-Vieira, Miguel; Chiuffa, Gabriela; Lebedev, Mikhail; Yadav, Amol; Nicolelis, Miguel A LScientific reports.2015;1186926158615
Computing Arm Movements with a Monkey Brainet.Ramakrishnan, Arjun; Ifft, Peter J; Pais-Vieira, Miguel; Byun, Yoon Woo; Zhuang, Katie Z; Lebedev, Mikhail A; Nicolelis, Miguel A LScientific reports.2015;1076726158523
Its preferential interactions with biopolymers account for diverse observed effects of trehalose.Hong, Jiang; Gierasch, Lila M; Liu, ZhichengBiophysical journal.2015 Jul 7;144-5326153711
From the neuron doctrine to neural networks.Yuste, RafaelNature reviews. Neuroscience.2015 Aug;26152865
Reference-free removal of EEG-fMRI ballistocardiogram artifacts with harmonic regression.Krishnaswamy, Pavitra; Bonmassar, Giorgio; Poulsen, Catherine; Pierce, Eric T; Purdon, Patrick L; Brown, Emery NNeuroImage.2015 Jul 5;26151100
The evolving capabilities of rhodopsin-based genetically encoded voltage indicators.Gong, YiyangCurrent opinion in chemical biology.2015 Aug;84-926143170
Piwi Is a Key Regulator of Both Somatic and Germline Stem Cells in the Drosophila Testis.Gonzalez, Jacob; Qi, Hongying; Liu, Na; Lin, HaifanCell reports.2015 Jul 7;150-6126119740
Nitrous oxide-induced slow and delta oscillations.Pavone, Kara J; Akeju, Oluwaseun; Sampson, Aaron L; Ling, Kelly; Purdon, Patrick L; Brown, Emery NClinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology.2015 Jun 10;26118489
Control of cerebrovascular patterning by neural activity during postnatal development.Lacoste, Baptiste; Gu, ChenghuaMechanisms of development.2015 Nov;43-926116138
Multiview Hilbert transformation for full-view photoacoustic computed tomography using a linear array.Li, Guo; Li, Lei; Zhu, Liren; Xia, Jun; Wang, Lihong VJournal of biomedical optics.2015 Jun;26112369
Diversity of astrocyte functions and phenotypes in neural circuits.Khakh, Baljit S; Sofroniew, Michael VNature neuroscience.2015 Jul;26108722
Dopamine's Actions in Primate Prefrontal Cortex: Challenges for Treating Cognitive Disorders.Arnsten, Amy F T; Wang, Min; Paspalas, Constantinos DPharmacological reviews.2015 Jul;681-9626106146
Antibiotic efficacy is linked to bacterial cellular respiration.Lobritz, Michael A; Belenky, Peter; Porter, Caroline B M; Gutierrez, Arnaud; Yang, Jason H; Schwarz, Eric G; Dwyer, Daniel J; Khalil, Ahmad S; Collins, James JProceedings of the National Academy of Sciences of the United States of America.2015 Jul 7;8173-8026100898
A cationic cysteine-hydrazide as an enrichment tool for the mass spectrometric characterization of bacterial free oligosaccharides.Jang, Kyoung-Soon; Nani, Roger R; Kalli, Anastasia; Levin, Sergiy; Müller, Axel; Hess, Sonja; Reisman, Sarah E; Clemons Jr, William MAnalytical and bioanalytical chemistry.2015 Aug;6181-9026100547
Engineered CRISPR-Cas9 nucleases with altered PAM specificities.Kleinstiver, Benjamin P; Prew, Michelle S; Tsai, Shengdar Q; Topkar, Ved V; Nguyen, Nhu T; Zheng, Zongli; Gonzales, Andrew P W; Li, Zhuyun; Peterson, Randall T; Yeh, Jing-Ruey Joanna; Aryee, Martin J; Joung, J KeithNature.2015 Jul 23;481-526098369
Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis.Levine, Jacob H; Simonds, Erin F; Bendall, Sean C; Davis, Kara L; Amir, El-ad D; Tadmor, Michelle D; Litvin, Oren; Fienberg, Harris G; Jager, Astraea; Zunder, Eli R; Finck, Rachel; Gedman, Amanda L; Radtke, Ina; Downing, James R; Pe'er, Dana; Nolan, GarryCell.2015 Jul 2;184-9726095251
Quantitative two-photon imaging of fluorescent biosensors.Yellen, Gary; Mongeon, RebeccaCurrent opinion in chemical biology.2015 Jun 12;24-3026079046
Single-Cell Whole-Genome Amplification and Sequencing: Methodology and Applications.Huang, Lei; Ma, Fei; Chapman, Alec; Lu, Sijia; Xie, Xiaoliang SunneyAnnual review of genomics and human genetics.2015;79-10226077818
Iron Toxicity in the Retina Requires Alu RNA and the NLRP3 Inflammasome.Gelfand, Bradley D; Wright, Charles B; Kim, Younghee; Yasuma, Tetsuhiro; Yasuma, Reo; Li, Shengjian; Fowler, Benjamin J; Bastos-Carvalho, Ana; Kerur, Nagaraj; Uittenbogaard, Annette; Han, Youn Seon; Lou, Dingyuan; Kleinman, Mark E; McDonald, W Hayes; Núñez, Gabriel; Georgel, Philippe; Dunaief, Joshua L; Ambati, JayakrishnaCell reports.2015 Jun 23;1686-9326074074
Ultra-large field-of-view two-photon microscopy.Tsai, Philbert S; Mateo, Celine; Field, Jeffrey J; Schaffer, Chris B; Anderson, Matthew E; Kleinfeld, DavidOptics express.2015 Jun 1;13833-4726072755
Endogenous sequential cortical activity evoked by visual stimuli.Carrillo-Reid, Luis; Miller, Jae-Eun Kang; Hamm, Jordan P; Jackson, Jesse; Yuste, RafaelThe Journal of neuroscience : the official journal of the Society for Neuroscience.2015 Jun 10;26063915
Sequence determinants of improved CRISPR sgRNA design.Xu, Han; Xiao, Tengfei; Chen, Chen-Hao; Li, Wei; Meyer, Clifford A; Wu, Qiu; Wu, Di; Cong, Le; Zhang, Feng; Liu, Jun S; Brown, Myles; Liu, X ShirleyGenome research.2015 Aug;26063738
Basal exon skipping and genetic pleiotropy: A predictive model of disease pathogenesis.Drivas, Theodore G; Wojno, Adam P; Tucker, Budd A; Stone, Edwin M; Bennett, JeanScience translational medicine.2015 Jun 10;291ra9726062849
Combined in vitro transcription and reverse transcription to amplify and label complex synthetic oligonucleotide probe libraries.Murgha, Yusuf; Beliveau, Brian; Semrau, Kassandra; Schwartz, Donald; Wu, Chao-Ting; Gulari, Erdogan; Rouillard, Jean-MarieBioTechniques.2015 Jun;26054766
Syringe-injectable electronics.Liu, Jia; Fu, Tian-Ming; Cheng, Zengguang; Hong, Guosong; Zhou, Tao; Jin, Lihua; Duvvuri, Madhavi; Jiang, Zhe; Kruskal, Peter; Xie, Chong; Suo, Zhigang; Fang, Ying; Lieber, Charles MNature nanotechnology.2015 Jul;629-3626053995
Scalable microfluidics for single-cell RNA printing and sequencing.Bose, Sayantan; Wan, Zhenmao; Carr, Ambrose; Rizvi, Abbas H; Vieira, Gregory; Pe'er, Dana; Sims, Peter AGenome biology.2015;12026047807
Nonlinear photoacoustic spectroscopy of hemoglobin.Danielli, Amos; Maslov, Konstantin; Favazza, Christopher P; Xia, Jun; Wang, Lihong VApplied physics letters.2015 May 18;26045627
CRISPR/Cas9 cleavage of viral DNA efficiently suppresses hepatitis B virus.Ramanan, Vyas; Shlomai, Amir; Cox, David B T; Schwartz, Robert E; Michailidis, Eleftherios; Bhatta, Ankit; Scott, David A; Zhang, Feng; Rice, Charles M; Bhatia, Sangeeta NScientific reports.2015;1083326035283
Robust control of burst suppression for medical coma.Westover, M Brandon; Kim, Seong-Eun; Ching, ShiNung; Purdon, Patrick L; Brown, Emery NJournal of neural engineering.2015 Aug;4600426020243
Epigenetic genome mining of an endophytic fungus leads to the pleiotropic biosynthesis of natural products.Mao, Xu-Ming; Xu, Wei; Li, Dehai; Yin, Wen-Bing; Chooi, Yit-Heng; Li, Yong-Quan; Tang, Yi; Hu, YoucaiAngewandte Chemie (International ed. in English).2015 Jun 22;7592-626013262
Dexterous robotic manipulation of alert adult Drosophila for high-content experimentation.Savall, Joan; Ho, Eric Tatt Wei; Huang, Cheng; Maxey, Jessica R; Schnitzer, Mark JNature methods.2015 Jul;657-6026005812
Probabilistic Common Spatial Patterns for Multichannel EEG Analysis.Wu, Wei; Chen, Zhe; Gao, Xiaorong; Li, Yuanqing; Brown, Emery N; Gao, ShangkaiIEEE transactions on pattern analysis and machine intelligence.2015 Mar 1;639-65326005228
Computational modeling of cardiac optogenetics: Methodology overview & review of findings from simulations.Boyle, Patrick M; Karathanos, Thomas V; Entcheva, Emilia; Trayanova, Natalia AComputers in biology and medicine.2015 Oct 1;200-826002074
Evolution. Systematic humanization of yeast genes reveals conserved functions and genetic modularity.Kachroo, Aashiq H; Laurent, Jon M; Yellman, Christopher M; Meyer, Austin G; Wilke, Claus O; Marcotte, Edward MScience (New York, N.Y.).2015 May 22;921-525999509
Does Autism Diagnosis Age or Symptom Severity Differ Among Children According to Whether Assisted Reproductive Technology was Used to Achieve Pregnancy?Schieve, Laura A; Fountain, Christine; Boulet, Sheree L; Yeargin-Allsopp, Marshalyn; Kissin, Dmitry M; Jamieson, Denise J; Rice, Catherine; Bearman, PeterJournal of autism and developmental disorders.2015 Sep;2991-300325997596
Measuring the signal-to-noise ratio of a neuron.Czanner, Gabriela; Sarma, Sridevi V; Ba, Demba; Eden, Uri T; Wu, Wei; Eskandar, Emad; Lim, Hubert H; Temereanca, Simona; Suzuki, Wendy A; Brown, Emery NProceedings of the National Academy of Sciences of the United States of America.2015 Jun 9;7141-625995363
Fetal Mammalian Heart Generates a Robust Compensatory Response to Cell Loss.Sturzu, Anthony C; Rajarajan, Kuppusamy; Passer, Derek; Plonowska, Karolina; Riley, Alyssa; Tan, Timothy C; Sharma, Arun; Xu, Adele F; Engels, Marc C; Feistritzer, Rebecca; Li, Guang; Selig, Martin K; Geissler, Richard; Robertson, Keston D; Scherrer-CrosbCirculation.2015 Jul 14;109-2125995316
Ultrasonic-heating-encoded photoacoustic tomography with virtually augmented detection view.Wang, Lidai; Li, Guo; Xia, Jun; Wang, Lihong VOptica.2015;307-31225984555
Regenerative Engineering and Bionic Limbs.James, Roshan; Laurencin, Cato TRare metals.2015 Mar 1;143-15525983525
Does language do more than communicate emotion?Lindquist, Kristen A; Satpute, Ajay B; Gendron, MariaCurrent directions in psychological science.2015 Apr 1;99-10825983400
Engineering strategies for the fermentative production of plant alkaloids in yeast.Trenchard, Isis J; Smolke, Christina DMetabolic engineering.2015 Jul;96-10425981946
Photoacoustic microscopy: superdepth, superresolution, and superb contrast.Yao, Junjie; Song, Liang; Wang, Lihing VIEEE pulse.2015 May-Jun;34-725974913
Detection of minimal residual disease in B lymphoblastic leukemia using viSNE.DiGiuseppe, Joseph A; Tadmor, Michelle D; Pe'er, DanaCytometry. Part B, Clinical cytometry.2015 Sep-Oct;294-30425974871
Single molecules meet genomics: pinpointing precision medicine.Xie, Xiaoliang SunneyJAMA.2015 May 26;2021-225974149
Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes.Beliveau, Brian J; Boettiger, Alistair N; Avendaño, Maier S; Jungmann, Ralf; McCole, Ruth B; Joyce, Eric F; Kim-Kiselak, Caroline; Bantignies, Frédéric; Fonseka, Chamith Y; Erceg, Jelena; Hannan, Mohammed A; Hoang, Hien G; Colognori, David; Lee, Jeannie T; Shih, William M; Yin, Peng; Zhuang, Xiaowei; Wu, Chao-tingNature communications.2015;714725962338
Cells change their sensitivity to an EGF morphogen gradient to control EGF-induced gene expression.van Zon, Jeroen Sebastiaan; Kienle, Simone; Huelsz-Prince, Guizela; Barkoulas, Michalis; van Oudenaarden, AlexanderNature communications.2015;705325958991
Modeling the aging heart: from local respiratory defects to global rhythm disturbances.Khrapko, Konstantin; Trayanova, Natalia; Nattel, StanleyCell metabolism.2015 May 5;25955202
Multiplex single cell profiling of chromatin accessibility by combinatorial cellular indexing.Cusanovich, Darren A; Daza, Riza; Adey, Andrew; Pliner, Hannah A; Christiansen, Lena; Gunderson, Kevin L; Steemers, Frank J; Trapnell, Cole; Shendure, JayScience (New York, N.Y.).2015 May 22;25953818
Brains, genes, and primates.Izpisua Belmonte, Juan Carlos; Callaway, Edward M; Caddick, Sarah J; Churchland, Patricia; Feng, Guoping; Homanics, Gregg E; Lee, Kuo-Fen; Leopold, David A; Miller, Cory T; Mitchell, Jude F; Mitalipov, Shoukhrat; Moutri, Alysson R; Movshon, J Anthony; Okano, Hideyuki; Reynolds, John H; Ringach, Dario; Sejnowski, Terrence J; Silva, Afonso C; Strick, Peter L; Wu, Jun; Zhang, FengNeuron.2015 May 6;617-3125950631
Direct in vivo assessment of human stem cell graft-host neural circuits.Byers, Blake; Lee, Hyun Joo; Liu, Jia; Weitz, Andrew J; Lin, Peter; Zhang, Pengbo; Shcheglovitov, Aleksandr; Dolmetsch, Ricardo; Pera, Renee Reijo; Lee, Jin HyungNeuroImage.2015 Jul 1;328-3725936696
Quantifying Pituitary-Adrenal Dynamics and Deconvolution of Concurrent Cortisol and Adrenocorticotropic Hormone Data by Compressed Sensing.Faghih, Rose; Dahleh, Munther; Adler, Gail; Klerman, Elizabeth; Brown, EmeryIEEE transactions on bio-medical engineering.2015 Apr 29;25935025
Multiscale Functional and Molecular Photoacoustic Tomography.Yao, Junjie; Xia, Jun; Wang, Lihong VUltrasonic imaging.2015 May 1;25933617
Photoacoustically guided wavefront shaping for enhanced optical focusing in scattering media.Lai, Puxiang; Wang, Lidai; Tay, Jian Wei; Wang, Lihong VNature photonics.2015 Feb;126-13225914725
Gene length matters in neurons.Zylka, Mark J; Simon, Jeremy M; Philpot, Benjamin DNeuron.2015 Apr 22;353-525905808
Temporal dynamics in fMRI resting-state activity.Yuste, Rafael; Fairhall, Adrienne LProceedings of the National Academy of Sciences of the United States of America.2015 Apr 28;25902550
Noninvasive imaging of immune responses.Rashidian, Mohammad; Keliher, Edmund J; Bilate, Angelina M; Duarte, Joao N; Wojtkiewicz, Gregory R; Jacobsen, Johanne Tracey; Cragnolini, Juanjo; Swee, Lee Kim; Victora, Gabriel D; Weissleder, Ralph; Ploegh, Hidde LProceedings of the National Academy of Sciences of the United States of America.2015 May 12;6146-5125902531
Ca(2+) signaling in astrocytes from Ip3r2(-/-) mice in brain slices and during startle responses in vivo.Srinivasan, Rahul; Huang, Ben S; Venugopal, Sharmila; Johnston, April D; Chai, Hua; Zeng, Hongkui; Golshani, Peyman; Khakh, Baljit SNature neuroscience.2015 May;708-1725894291
Drosophila dicer-2 cleavage is mediated by helicase- and dsRNA termini-dependent states that are modulated by Loquacious-PD.Sinha, Niladri K; Trettin, Kyle D; Aruscavage, P Joseph; Bass, Brenda LMolecular cell.2015 May 7;406-1725891075
What Is Next for Retinal Gene Therapy?Vandenberghe, Luk HCold Spring Harbor perspectives in medicine.2015 Apr 15;25877395
Three-dimensional photoacoustic endoscopic imaging of the rabbit esophagus.Yang, Joon Mo; Favazza, Christopher; Yao, Junjie; Chen, Ruimin; Zhou, Qifa; Shung, K Kirk; Wang, Lihong VPloS one.2015;e012026925874640
Powerful anti-tumor and anti-angiogenic activity of a new anti-vascular endothelial growth factor receptor 1 peptide in colorectal cancer models.Cicatiello, Valeria; Apicella, Ivana; Tudisco, Laura; Tarallo, Valeria; Formisano, Luigi; Sandomenico, Annamaria; Kim, Younghee; Bastos-Carvalho, Ana; Orlandi, Augusto; Ambati, Jayakrishna; Ruvo, Menotti; Bianco, Roberto; De Falco, SandroOncotarget.2015 Apr 30;10563-7625868854
Derivation of highly purified cardiomyocytes from human induced pluripotent stem cells using small molecule-modulated differentiation and subsequent glucose starvation.Sharma, Arun; Li, Guang; Rajarajan, Kuppusamy; Hamaguchi, Ryoko; Burridge, Paul W; Wu, Sean MJournal of visualized experiments : JoVE.2015 Mar 18;25867738
Direct protein delivery to mammalian cells using cell-permeable Cys2-His2 zinc-finger domains.Gaj, Thomas; Liu, JiaJournal of visualized experiments : JoVE.2015;25866937
Tandem prenyltransferases catalyze isoprenoid elongation and complexity generation in biosynthesis of quinolone alkaloids.Zou, Yi; Zhan, Zhajun; Li, Dehai; Tang, Mancheng; Cacho, Ralph A; Watanabe, Kenji; Tang, YiJournal of the American Chemical Society.2015 Apr 22;4980-325859931
Optical control of biological processes by light-switchable proteins.Fan, Linlin Z; Lin, Michael ZWiley interdisciplinary reviews. Developmental biology.2015 Sep-Oct;545-5425858669
Closed-loop, ultraprecise, automated craniotomies.Pak, Nikita; Siegle, Joshua H; Kinney, Justin P; Denman, Daniel J; Blanche, Timothy J; Boyden, Edward SJournal of neurophysiology.2015 Jun 1;3943-5325855700
High-throughput functional genomics using CRISPR-Cas9.Shalem, Ophir; Sanjana, Neville E; Zhang, FengNature reviews. Genetics.2015 May;299-31125854182
A Bayesian model of category-specific emotional brain responses.Wager, Tor D; Kang, Jian; Johnson, Timothy D; Nichols, Thomas E; Satpute, Ajay B; Barrett, Lisa FeldmanPLoS computational biology.2015 Apr;e100406625853490
Potential role for snoRNAs in PKR activation during metabolic stress.Youssef, Osama A; Safran, Sarah A; Nakamura, Takahisa; Nix, David A; Hotamisligil, Gokhan S; Bass, Brenda LProceedings of the National Academy of Sciences of the United States of America.2015 Apr 21;5023-825848059
Discovery of tricyclic indoles that potently inhibit Mcl-1 using fragment-based methods and structure-based design.Burke, Jason P; Bian, Zhiguo; Shaw, Subrata; Zhao, Bin; Goodwin, Craig M; Belmar, Johannes; Browning, Carrie F; Vigil, Dominico; Friberg, Anders; Camper, DeMarco V; Rossanese, Olivia W; Lee, Taekyu; Olejniczak, Edward T; Fesik, Stephen WJournal of medicinal chemistry.2015 May 14;3794-80525844895
Neuronal Activity and CaMKII Regulate Kinesin-Mediated Transport of Synaptic AMPARs.Hoerndli, Frédéric J; Wang, Rui; Mellem, Jerry E; Kallarackal, Angy; Brockie, Penelope J; Thacker, Colin; Madsen, David M; Maricq, Andres VNeuron.2015 Apr 22;457-7425843407
In vivo genome editing using Staphylococcus aureus Cas9.Ran, F Ann; Cong, Le; Yan, Winston X; Scott, David A; Gootenberg, Jonathan S; Kriz, Andrea J; Zetsche, Bernd; Shalem, Ophir; Wu, Xuebing; Makarova, Kira S; Koonin, Eugene V; Sharp, Phillip A; Zhang, FengNature.2015 Apr 9;186-9125830891
Copy-number variation and false positive prenatal aneuploidy screening results.Snyder, Matthew W; Simmons, LaVone E; Kitzman, Jacob O; Coe, Bradley P; Henson, Jessica M; Daza, Riza M; Eichler, Evan E; Shendure, Jay; Gammill, Hilary SThe New England journal of medicine.2015 Apr 23;1639-4525830323
Improved estimation and interpretation of correlations in neural circuits.Yatsenko, Dimitri; Josi?, Kre?imir; Ecker, Alexander S; Froudarakis, Emmanouil; Cotton, R James; Tolias, Andreas SPLoS computational biology.2015 Mar;e100408325826696
Massively Parallel Functional Analysis of BRCA1 RING Domain Variants.Starita, Lea M; Young, David L; Islam, Muhtadi; Kitzman, Jacob O; Gullingsrud, Justin; Hause, Ronald J; Fowler, Douglas M; Parvin, Jeffrey D; Shendure, Jay; Fields, StanleyGenetics.2015 Jun;413-2225823446
High-speed label-free functional photoacoustic microscopy of mouse brain in action.Yao, Junjie; Wang, Lidai; Yang, Joon-Mo; Maslov, Konstantin I; Wong, Terence T W; Li, Lei; Huang, Chih-Hsien; Zou, Jun; Wang, Lihong VNature methods.2015 May;407-1025822799
Single cell transcriptome amplification with MALBAC.Chapman, Alec R; He, Zi; Lu, Sijia; Yong, Jun; Tan, Longzhi; Tang, Fuchou; Xie, X SunneyPloS one.2015;e012088925822772
Interaction with WDR5 promotes target gene recognition and tumorigenesis by MYC.Thomas, Lance R; Wang, Qingguo; Grieb, Brian C; Phan, Jason; Foshage, Audra M; Sun, Qi; Olejniczak, Edward T; Clark, Travis; Dey, Soumyadeep; Lorey, Shelly; Alicie, Bethany; Howard, Gregory C; Cawthon, Bryan; Ess, Kevin C; Eischen, Christine M; Zhao, Zhongming; Fesik, Stephen W; Tansey, William PMolecular cell.2015 May 7;440-5225818646
Multiple facets for extracellular matrix mimicking in regenerative medicine.Zhang, Yu Shrike; Xia, YounanNanomedicine (London, England).2015;689-9225816873
I'm eating for two: parental dietary effects on offspring metabolism.Rando, Oliver J; Simmons, Rebecca ACell.2015 Mar 26;93-10525815988
Genome-wide profiling of the C. elegans dsRNAome.Whipple, Joseph M; Youssef, Osama A; Aruscavage, P Joseph; Nix, David A; Hong, Changjin; Johnson, W Evan; Bass, Brenda LRNA (New York, N.Y.).2015 May;786-80025805852
Reassessment of Piwi binding to the genome and Piwi impact on RNA polymerase II distribution.Lin, Haifan; Chen, Mengjie; Kundaje, Anshul; Valouev, Anton; Yin, Hang; Liu, Na; Neuenkirchen, Nils; Zhong, Mei; Snyder, MichaelDevelopmental cell.2015 Mar 23;772-425805139
Exploiting metabolic and antioxidant pathways to maintain vision in blinding disease.Ramachandran, Pavitra S; Song, Ji Yun; Bennett, JeanThe Journal of clinical investigation.2015 Apr;25798615
Optical-resolution photoacoustic endomicroscopy in vivo.Yang, Joon-Mo; Li, Chiye; Chen, Ruimin; Rao, Bin; Yao, Junjie; Yeh, Cheng-Hung; Danielli, Amos; Maslov, Konstantin; Zhou, Qifa; Shung, K Kirk; Wang, Lihong VBiomedical optics express.2015 Mar 1;918-3225798315
Modes of interaction between individuals dominate the topologies of real world networks.Lee, Insuk; Kim, Eiru; Marcotte, Edward MPloS one.2015;25793969
Whole-field visual motion drives swimming in larval zebrafish via a stochastic process.Portugues, Ruben; Haesemeyer, Martin; Blum, Mirella L; Engert, FlorianThe Journal of experimental biology.2015 May;25792753
N-Sulfonyl-?-lactam hapten as an effective labeling reagent for aldolase mAb.Inokuma, Tsubasa; Fuller, Roberta P; Barbas 3rd, Carlos FBioorganic & medicinal chemistry letters.2015 Apr 15;1684-725791455
Association between assisted reproductive technology conception and autism in California, 1997-2007.Fountain, Christine; Zhang, Yujia; Kissin, Dmitry M; Schieve, Laura A; Jamieson, Denise J; Rice, Catherine; Bearman, PeterAmerican journal of public health.2015 May;963-7125790396
Principles of designing interpretable optogenetic behavior experiments.Allen, Brian D; Singer, Annabelle C; Boyden, Edward SLearning & memory (Cold Spring Harbor, N.Y.).2015 Apr;232-825787711
Optochemical dissection of T-box gene-dependent medial floor plate development.Payumo, Alexander Y; Walker, Whitney J; McQuade, Lindsey E; Yamazoe, Sayumi; Chen, James KACS chemical biology.2015 Jun 19;1466-7525781211
My adventure in tRNA biology, so far.Pan, TaoRNA (New York, N.Y.).2015 Apr;25780201
Antibody engineering for increased potency, breadth and half-life.Sievers, Stuart A; Scharf, Louise; West Jr, Anthony P; Bjorkman, Pamela JCurrent opinion in HIV and AIDS.2015 May;151-925760931
Noninvasive photoacoustic microscopy of methemoglobin in vivo.Tang, Min; Zhou, Yong; Zhang, Ruiying; Wang, Lihong VJournal of biomedical optics.2015 Mar;3600725760655
Prolonged Period of Cortical Plasticity upon Redox Dysregulation in Fast-Spiking Interneurons.Morishita, Hirofumi; Cabungcal, Jan-Harry; Chen, Ying; Do, Kim Q; Hensch, Takao KBiological psychiatry.2015 Sep 15;396-40225758057
Visuomotor transformations underlying hunting behavior in zebrafish.Bianco, Isaac H; Engert, FlorianCurrent biology : CB.2015 Mar 30;25754638
Genome-wide CRISPR screen in a mouse model of tumor growth and metastasis.Chen, Sidi; Sanjana, Neville E; Zheng, Kaijie; Shalem, Ophir; Lee, Kyungheon; Shi, Xi; Scott, David A; Song, Jun; Pan, Jen Q; Weissleder, Ralph; Lee, Hakho; Zhang, Feng; Sharp, Phillip ACell.2015 Mar 12;1246-6025748654
Hypothalamic Agrp neurons drive stereotypic behaviors beyond feeding.Dietrich, Marcelo O; Zimmer, Marcelo R; Bober, Jeremy; Horvath, Tamas LCell.2015 Mar 12;1222-3225748653
Structural biology. Structural basis for chemokine recognition and activation of a viral G protein-coupled receptor.Burg, John S; Ingram, Jessica R; Venkatakrishnan, A J; Jude, Kevin M; Dukkipati, Abhiram; Feinberg, Evan N; Angelini, Alessandro; Waghray, Deepa; Dror, Ron O; Ploegh, Hidde L; Garcia, K ChristopherScience (New York, N.Y.).2015 Mar 6;1113-725745166
High relaxivity Gd(III)-DNA gold nanostars: investigation of shape effects on proton relaxation.Rotz, Matthew W; Culver, Kayla S B; Parigi, Giacomo; MacRenaris, Keith W; Luchinat, Claudio; Odom, Teri W; Meade, Thomas JACS nano.2015 Mar 24;3385-9625723190
An evolutionary role for HIV latency in enhancing viral transmission.Rouzine, Igor M; Weinberger, Ariel D; Weinberger, Leor SCell.2015 Feb 26;1002-1225723173
A theoretical justification for single molecule peptide sequencing.Swaminathan, Jagannath; Boulgakov, Alexander A; Marcotte, Edward MPLoS computational biology.2015 Feb;e100408025714988
The DEAH-box helicase Dhr1 dissociates U3 from the pre-rRNA to promote formation of the central pseudoknot.Sardana, Richa; Liu, Xin; Granneman, Sander; Zhu, Jieyi; Gill, Michael; Papoulas, Ophelia; Marcotte, Edward M; Tollervey, David; Correll, Carl C; Johnson, Arlen WPLoS biology.2015 Feb;e100208325710520
Hypothalamic POMC neurons promote cannabinoid-induced feeding.Koch, Marco; Varela, Luis; Kim, Jae Geun; Kim, Jung Dae; Hernández-Nuño, Francisco; Simonds, Stephanie E; Castorena, Carlos M; Vianna, Claudia R; Elmquist, Joel K; Morozov, Yury M; Rakic, Pasko; Bechmann, Ingo; Cowley, Michael A; Szigeti-Buck, Klara; Dietrich, Marcelo O; Gao, Xiao-Bing; Diano, Sabrina; Horvath, Tamas LNature.2015 Mar 5;45-5025707796
Threat perception after the Boston Marathon bombings: The effects of personal relevance and conceptual framing.Wormwood, Jolie Baumann; Lynn, Spencer K; Feldman Barrett, Lisa; Quigley, Karen SCognition & emotion.2016 Apr;539-4925707419
Robust and fragile aspects of cortical blood flow in relation to the underlying angioarchitecture.Shih, Andy Y; Rühlmann, Charlotta; Blinder, Pablo; Devor, Anna; Drew, Patrick J; Friedman, Beth; Knutsen, Per M; Lyden, Patrick D; Matéo, Céline; Mellander, Lisa; Nishimura, Nozomi; Schaffer, Chris B; Tsai, Philbert S; Kleinfeld, DavidMicrocirculation (New York, N.Y. : 1994).2015 Apr;204-1825705966
Corrigendum to ''effects of fibrosis morphology on reentrant ventricular tachycardia inducibility and simulation fidelity in patient-derived models''.Ringenberg, Jordan; Deo, Makarand; Filgueiras-Rama, David; Pizarro, Gonzalo; Ibañez, Borja; Peinado, Rafael; Trayanova, Natalia; Miller, Michael; Merino, José L; Berenfeld, Omer; Devabhaktuni, VijayClinical Medicine Insights. Cardiology.2014;5125698881
Tripling the detection view of high-frequency linear-array-based photoacoustic computed tomography by using two planar acoustic reflectors.Li, Guo; Xia, Jun; Wang, Kun; Maslov, Konstantin; Anastasio, Mark A; Wang, Lihong VQuantitative imaging in medicine and surgery.2015 Feb;57-6225694954
Multiscale modelling of relationships between protein classes and drug behavior across all diseases using the CANDO platform.Sethi, Geetika; Chopra, Gaurav; Samudrala, RamMini reviews in medicinal chemistry.2015;705-1725694071
Virtual electrophysiological study of atrial fibrillation in fibrotic remodeling.McDowell, Kathleen S; Zahid, Sohail; Vadakkumpadan, Fijoy; Blauer, Joshua; MacLeod, Rob S; Trayanova, Natalia APloS one.2015;e011711025692857
A platform for rapid exploration of aging and diseases in a naturally short-lived vertebrate.Harel, Itamar; Benayoun, Bérénice A; Machado, Ben; Singh, Param Priya; Hu, Chi-Kuo; Pech, Matthew F; Valenzano, Dario Riccardo; Zhang, Elisa; Sharp, Sabrina C; Artandi, Steven E; Brunet, AnneCell.2015 Feb 26;1013-2625684364
Intrinsic connectivity in the human brain does not reveal networks for 'basic' emotions.Touroutoglou, Alexandra; Lindquist, Kristen A; Dickerson, Bradford C; Barrett, Lisa FeldmanSocial cognitive and affective neuroscience.2015 Feb 12;25680990
Nonlytic spread of naked viruses.Bird, Sara W; Kirkegaard, KarlaAutophagy.2015;430-125680079
HypE-specific nanobodies as tools to modulate HypE-mediated target AMPylation.Truttmann, Matthias C; Wu, Qin; Stiegeler, Sarah; Duarte, Joao N; Ingram, Jessica; Ploegh, Hidde LThe Journal of biological chemistry.2015 Apr 3;9087-10025678711
Gene expression defines natural changes in mammalian lifespan.Fushan, Alexey A; Turanov, Anton A; Lee, Sang-Goo; Kim, Eun Bae; Lobanov, Alexei V; Yim, Sun Hee; Buffenstein, Rochelle; Lee, Sang-Rae; Chang, Kyu-Tae; Rhee, Hwanseok; Kim, Jong-So; Yang, Kap-Seok; Gladyshev, Vadim NAging cell.2015 Jun;352-6525677554
Handheld photoacoustic probe to detect both melanoma depth and volume at high speed in vivo.Zhou, Yong; Li, Guo; Zhu, Liren; Li, Chiye; Cornelius, Lynn A; Wang, Lihong VJournal of biophotonics.2015 Feb 9;25676898
General strategy for biodetection in high ionic strength solutions using transistor-based nanoelectronic sensors.Gao, Ning; Zhou, Wei; Jiang, Xiaocheng; Hong, Guosong; Fu, Tian-Ming; Lieber, Charles MNano letters.2015 Mar 11;2143-825664395
16p11.2 Deletion Syndrome Mice Display Sensory and Ultrasonic Vocalization Deficits During Social Interactions.Yang, Mu; Mahrt, Elena J; Lewis, Freeman; Foley, Gillian; Portmann, Thomas; Dolmetsch, Ricardo E; Portfors, Christine V; Crawley, Jacqueline NAutism research : official journal of the International Society for Autism Research.2015 Feb 7;25663600
Therapeutic genome editing: prospects and challenges.Cox, David Benjamin Turitz; Platt, Randall Jeffrey; Zhang, FengNature medicine.2015 Feb;25654603
Perspectives on best practices for gene therapy programs.Cheever, Thomas R; Berkley, Dale; Braun, Serge; Brown, Robert H; Byrne, Barry J; Chamberlain, Jeffrey S; Cwik, Valerie; Duan, Dongsheng; Federoff, Howard J; High, Katherine A; Kaspar, Brian K; Klinger, Katherine W; Larkindale, Jane; Lincecum, John; Mavilio, Fulvio; McDonald, Cheryl L; McLaughlin, James; Weiss McLeod, Bonnie; Mendell, Jerry R; Nuckolls, Glen; Stedman, Hansell H; Tagle, Danilo A; Vandenberghe, Luk H; Wang, Hao; Wernett, Pamela J; Wilson, James M; Porter, John D; Gubitz, Amelie KHuman gene therapy.2015 Mar;127-3325654329
Spatial information in large-scale neural recordings.Cybulski, Thaddeus R; Glaser, Joshua I; Marblestone, Adam H; Zamft, Bradley M; Boyden, Edward S; Church, George M; Kording, Konrad PFrontiers in computational neuroscience.2014;17225653613
The evolution of drug resistance in clinical isolates of Candida albicans.Ford, Christopher B; Funt, Jason M; Abbey, Darren; Issi, Luca; Guiducci, Candace; Martinez, Diego A; Delorey, Toni; Li, Bi Yu; White, Theodore C; Cuomo, Christina; Rao, Reeta P; Berman, Judith; Thompson, Dawn A; Regev, AviveLife.2015;e0066225646566
Comparative analysis of genome maintenance genes in naked mole rat, mouse, and human.MacRae, Sheila L; Zhang, Quanwei; Lemetre, Christophe; Seim, Inge; Calder, Robert B; Hoeijmakers, Jan; Suh, Yousin; Gladyshev, Vadim N; Seluanov, Andrei; Gorbunova, Vera; Vijg, Jan; Zhang, Zhengdong DAging cell.2015 Apr;288-9125645816
Mechanism of automaticity in cardiomyocytes derived from human induced pluripotent stem cells.Kim, Jong J; Yang, Lei; Lin, Bo; Zhu, Xiaodong; Sun, Bin; Kaplan, Aaron D; Bett, Glenna C L; Rasmusson, Randall L; London, Barry; Salama, GuyJournal of molecular and cellular cardiology.2015 Apr;81-9325644533
Computational analysis of the effect of valvular regurgitation on ventricular mechanics using a 3D electromechanics model.Lim, Ki Moo; Hong, Seung-Bae; Lee, Byong Kwon; Shim, Eun Bo; Trayanova, NataliaThe journal of physiological sciences : JPS.2015 Mar;25644379
A split-Cas9 architecture for inducible genome editing and transcription modulation.Zetsche, Bernd; Volz, Sara E; Zhang, FengNature biotechnology.2015 Feb;139-4225643054
Next-generation sequencing approach for connecting secondary metabolites to biosynthetic gene clusters in fungi.Cacho, Ralph A; Tang, Yi; Chooi, Yit-HengFrontiers in microbiology.2014;77425642215
Photoacoustic tomography: principles and advances.Xia, Jun; Yao, Junjie; Wang, Lihong VElectromagnetic waves (Cambridge, Mass.).2014;22-Jan25642127
Sparse feature selection identifies H2A.Z as a novel, pattern-specific biomarker for asymmetrically self-renewing distributed stem cells.Huh, Yang Hoon; Noh, Minsoo; Burden, Frank R; Chen, Jennifer C; Winkler, David A; Sherley, James LStem cell research.2015 Mar;144-5425636161
Large-scale imaging in small brains.Ahrens, Misha B; Engert, FlorianCurrent opinion in neurobiology.2015 Jun;25636154
Intra-spike crosslinking overcomes antibody evasion by HIV-1.Galimidi, Rachel P; Klein, Joshua S; Politzer, Maria S; Bai, Shiyu; Seaman, Michael S; Nussenzweig, Michel C; West Jr, Anthony P; Bjorkman, Pamela JCell.2015 Jan 29;433-4625635457
Small RNAs make big impact in cardiac repair.Krane, Markus; Deutsch, Marcus-André; Doppler, Stefanie; Lange, Rüdiger; Wu, Sean MCirculation research.2015 Jan 30;393-525634967
Identification of cardiovascular lineage descendants at single-cell resolution.Li, Guang; Plonowska, Karolina; Kuppusamy, Rajarajan; Sturzu, Anthony; Wu, Sean MDevelopment (Cambridge, England).2015 Mar 1;846-5725633351
The Brain Basis of Positive and Negative Affect: Evidence from a Meta-Analysis of the Human Neuroimaging Literature.Lindquist, Kristen A; Satpute, Ajay B; Wager, Tor D; Weber, Jochen; Barrett, Lisa FeldmanCerebral cortex (New York, N.Y. : 1991).2015 Jan 28;25631056
Data access for the 1,000 Plants (1KP) project.Matasci, Naim; Hung, Ling-Hong; Yan, Zhixiang; Carpenter, Eric J; Wickett, Norman J; Mirarab, Siavash; Nguyen, Nam; Warnow, Tandy; Ayyampalayam, Saravanaraj; Barker, Michael; Burleigh, J Gordon; Gitzendanner, Matthew A; Wafula, Eric; Der, Joshua P; dePamphilis, Claude W; Roure, Beatrice; Philippe, Herve; Ruhfel, Brad R; Miles, Nicholas W; Graham, Sean W; Mathews, Sarah; Surek, Barbara; Melkonian, Michael; Soltis, Douglas E; Soltis, Pamela S; Rothfels, Carl; Pokorny, Lisa; Shaw, Jonathan A; DeGironimo, Lisa; Stevenson, Dennis W; Villarreal, Juan Carlos; Chen, Tao; Kutchan, Toni M; Rolf, Megan; Baucom, Regina S; Deyholos, Michael K; Samudrala, Ram; Tian, Zhijian; Wu, Xiaolei; Sun, Xiao; Zhang, Yong; Wang, Jun; Leebens-Mack, Jim; Wong, Gane Ka-ShuGigaScience.2014;1725625010
Ameliorating treatment-refractory depression with intranasal ketamine: potential NMDA receptor actions in the pain circuitry representing mental anguish.Opler, Lewis A; Opler, Mark G A; Arnsten, Amy F TCNS spectrums.2016 Feb;22-Dec25619798
In vivo deep brain imaging of rats using oral-cavity illuminated photoacoustic computed tomography.Lin, Li; Xia, Jun; Wong, Terence T W; Li, Lei; Wang, Lihong VJournal of biomedical optics.2015 Jan;1601925611865
Cultural variation in emotion perception is real: a response to Sauter, Eisner, Ekman, and Scott (2015).Gendron, Maria; Roberson, Debi; Barrett, Lisa FeldmanPsychological science.2015 Mar;357-925608863
Astrocyte calcium signaling: from observations to functions and the challenges therein.Khakh, Baljit S; McCarthy, Ken DCold Spring Harbor perspectives in biology.2015 Apr;a02040425605709
Molecular regulation of cardiomyocyte differentiation.Paige, Sharon L; Plonowska, Karolina; Xu, Adele; Wu, Sean MCirculation research.2015 Jan 16;341-5325593278
Optical imaging. Expansion microscopy.Chen, Fei; Tillberg, Paul W; Boyden, Edward SScience (New York, N.Y.).2015 Jan 30;543-825592419
The evolution of bacterial mechanosensitive channels.Booth, Ian R; Miller, Samantha; Muller, Axel; Lehtovirta-Morley, LauraCell calcium.2015 Mar;140-5025591932
Optical drug monitoring: photoacoustic imaging of nanosensors to monitor therapeutic lithium in vivo.Cash, Kevin J; Li, Chiye; Xia, Jun; Wang, Lihong V; Clark, Heather AACS nano.2015 Feb 24;1692-825588028
Chloride cotransporter NKCC1 inhibitor bumetanide protects against white matter injury in a rodent model of periventricular leukomalacia.Jantzie, Lauren L; Hu, Melody Y; Park, Hyun-Kyung; Jackson, Michele C; Yu, Jenny; Maxwell, Jessie R; Jensen, Frances EPediatric research.2015 Apr;554-6225585037
Elucidation of the concise biosynthetic pathway of the communesin indole alkaloids.Lin, Hsiao-Ching; Chiou, Grace; Chooi, Yit-Heng; McMahon, Travis C; Xu, Wei; Garg, Neil K; Tang, YiAngewandte Chemie (International ed. in English).2015 Mar 2;3004-725571861
Mouse-human experimental epigenetic analysis unmasks dietary targets and genetic liability for diabetic phenotypes.Multhaup, Michael L; Seldin, Marcus M; Jaffe, Andrew E; Lei, Xia; Kirchner, Henriette; Mondal, Prosenjit; Li, Yuanyuan; Rodriguez, Varenka; Drong, Alexander; Hussain, Mehboob; Lindgren, Cecilia; McCarthy, Mark; Naslund, Erik; Zierath, Juleen R; Wong, G William; Feinberg, Andrew PCell metabolism.2015 Jan 6;138-4925565211
Tunable loading of oligonucleotides with secondary structure on gold nanoparticles through a pH-driven method.Dam, Duncan Hieu M; Lee, Hyojin; Lee, Raymond C; Kim, Ki Hun; Kelleher, Neil L; Odom, Teri WBioconjugate chemistry.2015 Feb 18;279-8525564799
Spatial tuning of acoustofluidic pressure nodes by altering net sonic velocity enables high-throughput, efficient cell sorting.Jung, Seung-Yong; Notton, Timothy; Fong, Erika; Shusteff, Maxim; Weinberger, Leor SLab on a chip.2015 Feb 21;1000-325563937
Massively parallel single-amino-acid mutagenesis.Kitzman, Jacob O; Starita, Lea M; Lo, Russell S; Fields, Stanley; Shendure, JayNature methods.2015 Mar;203-6, 4 p following 20625559584
Multi-view optical resolution photoacoustic microscopy.Zhu, Liren; Li, Lei; Gao, Liang; Wang, Lihong VOptica.2014;217-22225558469
Optical focusing deep inside dynamic scattering media with near-infrared time-reversed ultrasonically encoded (TRUE) light.Liu, Yan; Lai, Puxiang; Ma, Cheng; Xu, Xiao; Grabar, Alexander A; Wang, Lihong VNature communications.2015;590425556918
Scaling of gene expression with transcription-factor fugacity.Weinert, Franz M; Brewster, Robert C; Rydenfelt, Mattias; Phillips, Rob; Kegel, Willem KPhysical review letters.2014 Dec 19;25810125554908
ýýýý*ýýý-targeted copper nanoparticles incorporating an Sn 2 lipase-labile fumagillin prodrug for photoacoustic neovascular imaging and treatment.Zhang, Ruiying; Pan, Dipanjan; Cai, Xin; Yang, Xiaoxia; Senpan, Angana; Allen, John S; Lanza, Gregory M; Wang, Lihong VTheranostics.2015;124-3325553103
INK4 locus of the tumor-resistant rodent, the naked mole rat, expresses a functional p15/p16 hybrid isoform.Tian, Xiao; Azpurua, Jorge; Ke, Zhonghe; Augereau, Adeline; Zhang, Zhengdong D; Vijg, Jan; Gladyshev, Vadim N; Gorbunova, Vera; Seluanov, AndreiProceedings of the National Academy of Sciences of the United States of America.2015 Jan 27;1053-825550505
The influence of promoter architectures and regulatory motifs on gene expression in Escherichia coli.Rydenfelt, Mattias; Garcia, Hernan G; Cox 3rd, Robert Sidney; Phillips, RobPloS one.2014;e11434725549361
Optogenetic activation of cholinergic neurons in the PPT or LDT induces REM sleep.Van Dort, Christa J; Zachs, Daniel P; Kenny, Jonathan D; Zheng, Shu; Goldblum, Rebecca R; Gelwan, Noah A; Ramos, Daniel M; Nolan, Michael A; Wang, Karen; Weng, Feng-Ju; Lin, Yingxi; Wilson, Matthew A; Brown, Emery NProceedings of the National Academy of Sciences of the United States of America.2015 Jan 13;584-925548191
Intracellular expression of camelid single-domain antibodies specific for influenza virus nucleoprotein uncovers distinct features of its nuclear localization.Ashour, Joseph; Schmidt, Florian I; Hanke, Leo; Cragnolini, Juanjo; Cavallari, Marco; Altenburg, Arwen; Brewer, Rebeccah; Ingram, Jessica; Shoemaker, Charles; Ploegh, Hidde LJournal of virology.2015 Mar;2792-80025540369
Time-reversed adapted-perturbation (TRAP) optical focusing onto dynamic objects inside scattering media.Ma, Cheng; Xu, Xiao; Liu, Yan; Wang, Lihong VNature photonics.2014 Dec;931-93625530797
Deficiency of the 15-kDa selenoprotein led to cytoskeleton remodeling and non-apoptotic membrane blebbing through a RhoA/ROCK pathway.Bang, Jeyoung; Jang, Mihyun; Huh, Jang Hoe; Na, Ji-Woon; Shim, Myoungsup; Carlson, Bradley A; Tobe, Ryuta; Tsuji, Petra A; Gladyshev, Vadim N; Hatfield, Dolph L; Lee, Byeong JaeBiochemical and biophysical research communications.2015 Jan 24;884-9025529450
Promoter architecture dictates cell-to-cell variability in gene expression.Jones, Daniel L; Brewster, Robert C; Phillips, RobScience (New York, N.Y.).2014 Dec 19;1533-625525251
Association of assisted reproductive technology (ART) treatment and parental infertility diagnosis with autism in ART-conceived children.Kissin, D M; Zhang, Y; Boulet, S L; Fountain, C; Bearman, P; Schieve, L; Yeargin-Allsopp, M; Jamieson, D JHuman reproduction (Oxford, England).2015 Feb;454-6525518976
GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases.Tsai, Shengdar Q; Zheng, Zongli; Nguyen, Nhu T; Liebers, Matthew; Topkar, Ved V; Thapar, Vishal; Wyvekens, Nicolas; Khayter, Cyd; Iafrate, A John; Le, Long P; Aryee, Martin J; Joung, J KeithNature biotechnology.2015 Feb;187-9725513782
A self-assembling lanthanide molecular nanoparticle for optical imaging.Brown, Katherine A; Yang, Xiaoping; Schipper, Desmond; Hall, Justin W; DePue, Lauren J; Gnanam, Annie J; Arambula, Jonathan F; Jones, Jessica N; Swaminathan, Jagannath; Dieye, Yakhya; Vadivelu, Jamuna; Chandler, Don J; Marcotte, Edward M; Sessler, Jonathan L; Ehrlich, Lauren I R; Jones, Richard ADalton transactions (Cambridge, England : 2003).2015 Feb 14;2667-7525512085
Disrupted calcium release as a mechanism for atrial alternans associated with human atrial fibrillation.Chang, Kelly C; Bayer, Jason D; Trayanova, Natalia APLoS computational biology.2014 Dec;e100401125501557
High-resolution sequencing and modeling identifies distinct dynamic RNA regulatory strategies.Rabani, Michal; Raychowdhury, Raktima; Jovanovic, Marko; Rooney, Michael; Stumpo, Deborah J; Pauli, Andrea; Hacohen, Nir; Schier, Alexander F; Blackshear, Perry J; Friedman, Nir; Amit, Ido; Regev, AvivCell.2014 Dec 18;1698-71025497548
Methylation-dependent acyl transfer between polyketide synthase and nonribosomal peptide synthetase modules in fungal natural product biosynthesis.Zou, Yi; Xu, Wei; Tsunematsu, Yuta; Tang, Mancheng; Watanabe, Kenji; Tang, YiOrganic letters.2014 Dec 19;6390-325494235
Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex.Konermann, Silvana; Brigham, Mark D; Trevino, Alexandro E; Joung, Julia; Abudayyeh, Omar O; Barcena, Clea; Hsu, Patrick D; Habib, Naomi; Gootenberg, Jonathan S; Nishimasu, Hiroshi; Nureki, Osamu; Zhang, FengNature.2015 Jan 29;583-825494202
Imaging intracellular Ca²? signals in striatal astrocytes from adult mice using genetically-encoded calcium indicators.Jiang, Ruotian; Haustein, Martin D; Sofroniew, Michael V; Khakh, Baljit SJournal of visualized experiments : JoVE.2014;e5197225490346
Myocardial infarct segmentation and reconstruction from 2D late-gadolinium enhanced magnetic resonance images.Ukwatta, Eranga; Yuan, Jing; Qiu, Wu; Wu, Katherine C; Trayanova, Natalia; Vadakkumpadan, FijoyMedical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention.2014;554-6125485423
Patching up broken hearts: cardiac cell therapy gets a bioengineered boost.Serpooshan, Vahid; Wu, Sean MCell stem cell.2014 Dec 04;25479741
Stimuli-Responsive Materials for Controlled Release of Theranostic Agents.Wang, Yucai; Shim, Min Suk; Levinson, Nathanael S; Sung, Hsing-Wen; Xia, YounanAdvanced functional materials.2014 Jul 16;4206-422025477774
Decreased H3K27 and H3K4 trimethylation on mortal chromosomes in distributed stem cells.Huh, Y H; Sherley, J LCell death & disease.2014;e155425476902
IL-18 is not therapeutic for neovascular age-related macular degeneration.Hirano, Yoshio; Yasuma, Tetsuhiro; Mizutani, Takeshi; Fowler, Benjamin J; Tarallo, Valeria; Yasuma, Reo; Kim, Younghee; Bastos-Carvalho, Ana; Kerur, Nagaraj; Gelfand, Bradley D; Bogdanovich, Sasha; He, Shikun; Zhang, Xiaohui; Nozaki, Miho; Ijima, Ryo; Kaneko, Hiroki; Ogura, Yuichiro; Terasaki, Hiroko; Nagai, Hiroshi; Haro, Isao; Núñez, Gabriel; Ambati, Balamurali K; Hinton, David R; Ambati, JayakrishnaNature medicine.2014 Dec;1372-525473914
Single-shot compressed ultrafast photography at one hundred billion frames per second.Gao, Liang; Liang, Jinyang; Li, Chiye; Wang, Lihong VNature.2014 Dec 4;74-725471883
Deconstructing transcriptional heterogeneity in pluripotent stem cells.Kumar, Roshan M; Cahan, Patrick; Shalek, Alex K; Satija, Rahul; DaleyKeyser, A Jay; Li, Hu; Zhang, Jin; Pardee, Keith; Gennert, David; Trombetta, John J; Ferrante, Thomas C; Regev, Aviv; Daley, George Q; Collins, James JNature.2014 Dec 4;56-6125471879
Biodistribution and in vivo toxicity of aptamer-loaded gold nanostars.Dam, Duncan Hieu M; Culver, Kayla S B; Kandela, Irawati; Lee, Raymond C; Chandra, Kavita; Lee, Hyojin; Mantis, Christine; Ugolkov, Andrey; Mazar, Andrew P; Odom, Teri WNanomedicine : nanotechnology, biology, and medicine.2015 Apr;671-925461281
''Beauty is a light in the heart'': the transformative potential of optogenetics for clinical applications in cardiovascular medicine.Boyle, Patrick M; Karathanos, Thomas V; Trayanova, Natalia ATrends in cardiovascular medicine.2015 Feb;73-8125453984
The Effects of Stress Exposure on Prefrontal Cortex: Translating Basic Research into Successful Treatments for Post-Traumatic Stress Disorder.Arnsten, Amy F T; Raskind, Murray A; Taylor, Fletcher B; Connor, Daniel FNeurobiology of stress.2015 Jan 1;89-9925436222
Facile characterization of aptamer kinetic and equilibrium binding properties using surface plasmon resonance.Chang, Andrew L; McKeague, Maureen; Smolke, Christina DMethods in enzymology.2014;451-6625432760
Disruption of thalamic functional connectivity is a neural correlate of dexmedetomidine-induced unconsciousness.Akeju, Oluwaseun; Loggia, Marco L; Catana, Ciprian; Pavone, Kara J; Vazquez, Rafael; Rhee, James; Contreras Ramirez, Violeta; Chonde, Daniel B; Izquierdo-Garcia, David; Arabasz, Grae; Hsu, Shirley; Habeeb, Kathleen; Hooker, Jacob M; Napadow, Vitaly; Brown, Emery N; Purdon, Patrick LeLife.2014;e0449925432022
Exploring susceptibility to atrial and ventricular arrhythmias resulting from remodeling of the passive electrical properties in the heart: a simulation approach.Trayanova, Natalia A; Boyle, Patrick M; Arevalo, Hermenegild J; Zahid, SohailFrontiers in physiology.2014;43525429272
Frequency-swept time-reversed ultrasonically encoded optical focusing.Suzuki, Yuta; Wang, Lihong VApplied physics letters.2014 Nov 10;19110825425744
Directed evolution of APEX2 for electron microscopy and proximity labeling.Lam, Stephanie S; Martell, Jeffrey D; Kamer, Kimberli J; Deerinck, Thomas J; Ellisman, Mark H; Mootha, Vamsi K; Ting, Alice YNature methods.2015 Jan;51-425419960
Imaging changes in the cytosolic ATP-to-ADP ratio.Tantama, Mathew; Yellen, GaryMethods in enzymology.2014;355-7125416365
Nucleoside reverse transcriptase inhibitors possess intrinsic anti-inflammatory activity.Fowler, Benjamin J; Gelfand, Bradley D; Kim, Younghee; Kerur, Nagaraj; Tarallo, Valeria; Hirano, Yoshio; Amarnath, Shoba; Fowler, Daniel H; Radwan, Marta; Young, Mark T; Pittman, Keir; Kubes, Paul; Agarwal, Hitesh K; Parang, Keykavous; Hinton, David R; Bastos-Carvalho, Ana; Li, Shengjian; Yasuma, Tetsuhiro; Mizutani, Takeshi; Yasuma, Reo; Wright, Charles; Ambati, JayakrishnaScience (New York, N.Y.).2014 Nov 21;1000-325414314
Constructing cities, deconstructing scaling laws.Arcaute, Elsa; Hatna, Erez; Ferguson, Peter; Youn, Hyejin; Johansson, Anders; Batty, MichaelJournal of the Royal Society, Interface / the Royal Society.2015 Jan 6;2014074525411405
The transcriptome of the bowhead whale Balaena mysticetus reveals adaptations of the longest-lived mammal.Seim, Inge; Ma, Siming; Zhou, Xuming; Gerashchenko, Maxim V; Lee, Sang-Goo; Suydam, Robert; George, John C; Bickham, John W; Gladyshev, Vadim NAging.2014 Oct;879-9925411232
Photoacoustic lymphatic imaging with high spatial-temporal resolution.Martel, Catherine; Yao, Junjie; Huang, Chih-Hsien; Zou, Jun; Randolph, Gwendalyn J; Wang, Lihong VJournal of biomedical optics.2014 Nov;11600925408958
Topoisomerase 1 inhibition reversibly impairs synaptic function.Mabb, Angela M; Kullmann, Paul H M; Twomey, Margaret A; Miriyala, Jayalakshmi; Philpot, Benjamin D; Zylka, Mark JProceedings of the National Academy of Sciences of the United States of America.2014 Dec 2;17290-525404338
Tunable protein degradation in bacteria.Cameron, D Ewen; Collins, James JNature biotechnology.2014 Dec;1276-8125402616
Photoacoustic Brain Imaging: from Microscopic to Macroscopic Scales.Yao, Junjie; Wang, Lihong VNeurophotonics.2014 May 28;25401121
Genome engineering with custom recombinases.Gaj, Thomas; Barbas 3rd, Carlos FMethods in enzymology.2014;79-9125398336
A Drosophila toolkit for the visualization and quantification of viral replication launched from transgenic genomes.Wernet, Mathias F; Klovstad, Martha; Clandinin, Thomas RPloS one.2014;e11209225386852
Breakthrough in Photonics 2013: Photoacoustic Tomography in Biomedicine.Yao, Junjie; Wang, Lihong VIEEE photonics journal.2014 Apr;25383143
Grueneisen relaxation photoacoustic microscopy.Wang, Lidai; Zhang, Chi; Wang, Lihong VPhysical review letters.2014 Oct 24;17430125379919
Pupil fluctuations track fast switching of cortical states during quiet wakefulness.Reimer, Jacob; Froudarakis, Emmanouil; Cadwell, Cathryn R; Yatsenko, Dimitri; Denfield, George H; Tolias, Andreas SNeuron.2014 Oct 22;355-6225374359
Cell intrinsic modulation of Wnt signaling controls neuroblast migration in C. elegans.Mentink, Remco A; Middelkoop, Teije C; Rella, Lorenzo; Ji, Ni; Tang, Chung Yin; Betist, Marco C; van Oudenaarden, Alexander; Korswagen, Hendrik CDevelopmental cell.2014 Oct 27;188-20125373777
Dominant drug targets suppress the emergence of antiviral resistance.Tanner, Elizabeth J; Liu, Hong-mei; Oberste, M Steven; Pallansch, Mark; Collett, Marc S; Kirkegaard, KarlaeLife.2014;25365453
Optogenetics-enabled dynamic modulation of action potential duration in atrial tissue: feasibility of a novel therapeutic approach.Karathanos, Thomas V; Boyle, Patrick M; Trayanova, Natalia AEuropace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology.2014 Nov;iv69-iv7625362173
One-step enzymatic modification of the cell surface redirects cellular cytotoxicity and parasite tropism.Swee, Lee Kim; Lourido, Sebastian; Bell, George W; Ingram, Jessica R; Ploegh, Hidde LACS chemical biology.2015 Feb 20;460-525360987
Amplitude-masked photoacoustic wavefront shaping and application in flowmetry.Tay, Jian Wei; Liang, Jinyang; Wang, Lihong VOptics letters.2014 Oct 1;5499-50225360912
DICER1/Alu RNA dysmetabolism induces Caspase-8-mediated cell death in age-related macular degeneration.Kim, Younghee; Tarallo, Valeria; Kerur, Nagaraj; Yasuma, Tetsuhiro; Gelfand, Bradley D; Bastos-Carvalho, Ana; Hirano, Yoshio; Yasuma, Reo; Mizutani, Takeshi; Fowler, Benjamin J; Li, Shengjian; Kaneko, Hiroki; Bogdanovich, Sasha; Ambati, Balamurali K; Hinton, David R; Hauswirth, William W; Hakem, Razqallah; Wright, Charles; Ambati, JayakrishnaProceedings of the National Academy of Sciences of the United States of America.2014 Nov 11;16082-725349431
The rate of osmotic downshock determines the survival probability of bacterial mechanosensitive channel mutants.Bialecka-Fornal, Maja; Lee, Heun Jin; Phillips, RobJournal of bacteriology.2015 Jan 1;231-725349158
Cell-based reporters reveal in vivo dynamics of dopamine and norepinephrine release in murine cortex.Muller, Arnaud; Joseph, Victory; Slesinger, Paul A; Kleinfeld, DavidNature methods.2014 Dec;1245-5225344639
Germs are germs, and why not take a risk? Patients' expectations for prescribing antibiotics in an inner-city emergency department.Broniatowski, David A; Klein, Eili Y; Reyna, Valerie FMedical decision making : an international journal of the Society for Medical Decision Making.2015 Jan;60-725331913
In vivo interrogation of gene function in the mammalian brain using CRISPR-Cas9.Swiech, Lukasz; Heidenreich, Matthias; Banerjee, Abhishek; Habib, Naomi; Li, Yinqing; Trombetta, John; Sur, Mriganka; Zhang, FengNature biotechnology.2015 Jan;102-625326897
Drugging the undruggable RAS: Mission possible?Cox, Adrienne D; Fesik, Stephen W; Kimmelman, Alec C; Luo, Ji; Der, Channing JNature reviews. Drug discovery.2014 Nov;828-5125323927
Computational design of a red fluorophore ligase for site-specific protein labeling in living cells.Liu, Daniel S; Nivon, Lucas G; Richter, Florian; Goldman, Peter J; Deerinck, Thomas J; Yao, Jennifer Z; Richardson, Douglas; Phipps, William S; Ye, Anne Z; Ellisman, Mark H; Drennan, Catherine L; Baker, David; Ting, Alice YProceedings of the National Academy of Sciences of the United States of America.2014 Oct 28;E4551-925313043
Directional interactions and cooperativity between mechanosensitive membrane proteins.Haselwandter, Christoph A; Phillips, RobEurophysics letters.2013 Mar;68002p1-68002p625309021
Identification of Orai1 channel inhibitors by using minimal functional domains to screen small molecule microarrays.Sadaghiani, Amir Masoud; Lee, Sang Min; Odegaard, Justin I; Leveson-Gower, Dennis B; McPherson, Olivia M; Novick, Paul; Kim, Mi Ri; Koehler, Angela N; Negrin, Robert; Dolmetsch, Ricardo E; Park, Chan YoungChemistry & biology.2014 Oct 23;1278-9225308275
O-GlcNAc transferase enables AgRP neurons to suppress browning of white fat.Ruan, Hai-Bin; Dietrich, Marcelo O; Liu, Zhong-Wu; Zimmer, Marcelo R; Li, Min-Dian; Singh, Jay Prakash; Zhang, Kaisi; Yin, Ruonan; Wu, Jing; Horvath, Tamas L; Yang, XiaoyongCell.2014 Oct 9;306-1725303527
Sensitivity of photoacoustic microscopy.Yao, Junjie; Wang, Lihong VPhotoacoustics.2014 Jun;87-10125302158
Design and characterization of structured protein linkers with differing flexibilities.Klein, Joshua S; Jiang, Siduo; Galimidi, Rachel P; Keeffe, Jennifer R; Bjorkman, Pamela JProtein engineering, design & selection : PEDS.2014 Oct;325-3025301959
Biophysical Modeling of Alpha Rhythms During Halothane-Induced Unconsciousness.Vijayan, Sujith; Ching, ShiNung; Purdon, Patrick L; Brown, Emery N; Kopell, Nancy JInternational IEEE/EMBS Conference on Neural Engineering : [proceedings]. International IEEE EMBS Conference on Neural Engineering.2013;1104-110725284633
Lanthanide nano-drums: a new class of molecular nanoparticles for potential biomedical applications.Jones, Richard A; Gnanam, Annie J; Arambula, Jonathan F; Jones, Jessica N; Swaminathan, Jagannath; Yang, Xiaoping; Schipper, Desmond; Hall, Justin W; DePue, Lauren J; Dieye, Yakhya; Vadivelu, Jamuna; Chandler, Don J; Marcotte, Edward M; Sessler, Jonathan L; Ehrlich, Lauren I R; Brown, Katherine AFaraday discussions.2014;241-5525284181
Posttranscriptional regulation of gene expression by Piwi proteins and piRNAs.Watanabe, Toshiaki; Lin, HaifanMolecular cell.2014 Oct 2;18-2725280102
Protein-responsive ribozyme switches in eukaryotic cells.Kennedy, Andrew B; Vowles, James V; d'Espaux, Leo; Smolke, Christina DNucleic acids research.2014 Oct 29;12306-2125274734
Modulation depth estimation and variable selection in state-space models for neural interfaces.Malik, Wasim Q; Hochberg, Leigh R; Donoghue, John P; Brown, Emery NIEEE transactions on bio-medical engineering.2015 Feb;570-8125265627
CRISPR-Cas9 knockin mice for genome editing and cancer modeling.Platt, Randall J; Chen, Sidi; Zhou, Yang; Yim, Michael J; Swiech, Lukasz; Kempton, Hannah R; Dahlman, James E; Parnas, Oren; Eisenhaure, Thomas M; Jovanovic, Marko; Graham, Daniel B; Jhunjhunwala, Siddharth; Heidenreich, Matthias; Xavier, Ramnik J; Langer, Robert; Anderson, Daniel G; Hacohen, Nir; Regev, Aviv; Feng, Guoping; Sharp, Phillip A; Zhang, FengCell.2014 Oct 9;440-5525263330
The ins and outs of viral infection: keystone meeting review.Bird, Sara W; Kirkegaard, Karla; Agbandje-McKenna, Mavis; Freed, Eric OViruses.2014 Sep;3652-6225256395
Effects of sevoflurane and propofol on frontal electroencephalogram power and coherence.Akeju, Oluwaseun; Westover, M Brandon; Pavone, Kara J; Sampson, Aaron L; Hartnack, Katharine E; Brown, Emery N; Purdon, Patrick LAnesthesiology.2014 Nov;990-825233374
The big data problem: turning maps into knowledge.Engert, FlorianNeuron.2014 Sep 17;25233305
Designing tools for assumption-proof brain mapping.Marblestone, Adam H; Boyden, Edward SNeuron.2014 Sep 17;1239-4125233303
A system for multilocus chromosomal integration and transformation-free selection marker rescue.Siddiqui, Michael S; Choksi, Atri; Smolke, Christina DFEMS yeast research.2014 Dec;1171-8525226817
Microvascular quantification based on contour-scanning photoacoustic microscopy.Yeh, Chenghung; Soetikno, Brian; Hu, Song; Maslov, Konstantin I; Wang, Lihong VJournal of biomedical optics.2014 Sep;9601125223708
Joint cross-correlation analysis reveals complex, time-dependent functional relationship between cortical neurons and arm electromyograms.Zhuang, Katie Z; Lebedev, Mikhail A; Nicolelis, Miguel A LJournal of neurophysiology.2014 Dec 1;2865-8725210153
Ex vivo Expansion of Human Adult Pancreatic Cells with Properties of Distributed Stem Cells by Suppression of Asymmetric Cell Kinetics.Pare, Jf; Sherley, JlJournal of stem cell research & therapy.2013 Sep;14925197614
The mechanics of PLGA nanofiber scaffolds with biomimetic gradients in mineral for tendon-to-bone repair.Lipner, J; Liu, W; Liu, Y; Boyle, J; Genin, G M; Xia, Y; Thomopoulos, SJournal of the mechanical behavior of biomedical materials.2014 Dec;59-6825194525
A comparison of propofol- and dexmedetomidine-induced electroencephalogram dynamics using spectral and coherence analysis.Akeju, Oluwaseun; Pavone, Kara J; Westover, M Brandon; Vazquez, Rafael; Prerau, Michael J; Harrell, Priscilla G; Hartnack, Katharine E; Rhee, James; Sampson, Aaron L; Habeeb, Kathleen; Gao, Lei; Lei, Gao; Pierce, Eric T; Walsh, John L; Brown, Emery N; Purdon, Patrick LAnesthesiology.2014 Nov;978-8925187999
Biosynthesis of fungal indole alkaloids.Xu, Wei; Gavia, Diego J; Tang, YiNatural product reports.2014 Oct;1474-8725180619
Levels of circulating myeloid subpopulations and of heme oxygenase-1 do not predict CD4(+) T cell recovery after the initiation of antiretroviral therapy for HIV disease.Seu, Lillian; Ortiz, Gabriel M; Burt, Trevor D; Deeks, Steven G; Martin, Jeffrey N; McCune, Joseph MAIDS research and therapy.2014;2725180041
Adaptations to a subterranean environment and longevity revealed by the analysis of mole rat genomes.Fang, Xiaodong; Seim, Inge; Huang, Zhiyong; Gerashchenko, Maxim V; Xiong, Zhiqiang; Turanov, Anton A; Zhu, Yabing; Lobanov, Alexei V; Fan, Dingding; Yim, Sun Hee; Yao, Xiaoming; Ma, Siming; Yang, Lan; Lee, Sang-Goo; Kim, Eun Bae; Bronson, Roderick T; ?umbera, Radim; Buffenstein, Rochelle; Zhou, Xin; Krogh, Anders; Park, Thomas J; Zhang, Guojie; Wang, Jun; Gladyshev, Vadim NCell reports.2014 Sep 11;1354-6425176646
CD39 and CD161 modulate Th17 responses in Crohn's disease.Bai, Aiping; Moss, Alan; Kokkotou, Efi; Usheva, Anny; Sun, Xiaofeng; Cheifetz, Adam; Zheng, Yi; Longhi, Maria Serena; Gao, Wenda; Wu, Yan; Robson, Simon CJournal of immunology (Baltimore, Md. : 1950).2014 Oct 1;3366-7725172498
Near-infrared optical-resolution photoacoustic microscopy.Hai, Pengfei; Yao, Junjie; Maslov, Konstantin I; Zhou, Yong; Wang, Lihong VOptics letters2014 Sep 15192-525166107
Nonlytic viral spread enhanced by autophagy components.Bird, Sara Whitney; Maynard, Nathaniel D; Covert, Markus W; Kirkegaard, KarlaProceedings of the National Academy of Sciences of the United States of America.2014 Sep 9;13081-625157142
A microbial biomanufacturing platform for natural and semisynthetic opioids.Thodey, Kate; Galanie, Stephanie; Smolke, Christina DNature chemical biology2014 Aug 24NULL25151135
How lamina-associated polypeptide 1 (LAP1) activates Torsin.Sosa, Brian A; Demircioglu, F Esra; Chen, James Z; Ingram, Jessica; Ploegh, Hidde L; Schwartz, Thomas UeLife.2014;e0323925149450
Methodology for image-based reconstruction of ventricular geometry for patient-specific modeling of cardiac electrophysiology.Prakosa, A; Malamas, P; Zhang, S; Pashakhanloo, F; Arevalo, H; Herzka, D A; Lardo, A; Halperin, H; McVeigh, E; Trayanova, N; Vadakkumpadan, FProgress in biophysics and molecular biology.2014 Aug;226-3425148771
Reversibly switchable fluorescence microscopy with enhanced resolution and image contrast.Yao, Junjie; Shcherbakova, Daria M; Li, Chiye; Krumholz, Arie; Lorca, Ramon A; Reinl, Erin; England, Sarah K; Verkhusha, Vladislav V; Wang, Lihong VJournal of biomedical optics.2014 Aug;8601825144452
Microcirculatory changes identified by photoacoustic microscopy in patients with complex regional pain syndrome type I after stellate ganglion blocks.Zhou, Yong; Yi, Xiaobin; Xing, Wenxin; Hu, Song; Maslov, Konstantin I; Wang, Lihong VJournal of biomedical optics.2014 Aug;8601725144451
Saturation editing of genomic regions by multiplex homology-directed repair.Findlay, Gregory M; Boyle, Evan A; Hause, Ronald J; Klein, Jason C; Shendure, JayNature.2014 Sep 4;120-325141179
**T Cell Receptors Expressed by CD4(-)CD8**(-) Intraepithelial T Cells Drive Their Fate into a Unique Lineage with Unusual MHC Reactivities.Mayans, Sofia; Stepniak, Dariusz; Palida, Sakina F; Larange, Alexandre; Dreux, Joanna; Arlian, Britni M; Shinnakasu, Ryo; Kronenberg, Mitchell; Cheroutre, Hilde; Lambolez, FlorenceImmunity2014 Aug 21207-1825131531
Adeno-associated virus: fit to serve.Zinn, Eric; Vandenberghe, Luk HCurrent opinion in virology.2014 Oct;90-725128609
State-dependent architecture of thalamic reticular subnetworks.Halassa, Michael M; Chen, Zhe; Wimmer, Ralf D; Brunetti, Philip M; Zhao, Shengli; Zikopoulos, Basilis; Wang, Fan; Brown, Emery N; Wilson, Matthew ACell.2014 Aug 14;808-2125126786
Prion propagation can occur in a prokaryote and requires the ClpB chaperone.Yuan, Andy H; Garrity, Sean J; Nako, Entela; Hochschild, AnneLife.2014;e0294925122461
Handheld photoacoustic microscopy to detect melanoma depth in vivo.Zhou, Yong; Xing, Wenxin; Maslov, Konstantin I; Cornelius, Lynn A; Wang, Lihong VOptics letters2014 Aug 154731-425121860
CRISPR-mediated direct mutation of cancer genes in the mouse liver.Xue, Wen; Chen, Sidi; Yin, Hao; Tammela, Tuomas; Papagiannakopoulos, Thales; Joshi, Nikhil S; Cai, Wenxin; Yang, Gillian; Bronson, Roderick; Crowley, Denise G; Zhang, Feng; Anderson, Daniel G; Sharp, Phillip A; Jacks, TylerNature.2014 Oct 16;380-425119044
Efficient CRISPR-Cas9-mediated genome editing in Plasmodium falciparum.Wagner, Jeffrey C; Platt, Randall J; Goldfless, Stephen J; Zhang, Feng; Niles, Jacquin CNature methods.2014 Sep;915-825108687
Label-free photoacoustic nanoscopy.Danielli, Amos; Maslov, Konstantin; Garcia-Uribe, Alejandro; Winkler, Amy M; Li, Chiye; Wang, Lidai; Chen, Yun; Dorn 2nd, Gerald W; Wang, Lihong VJournal of biomedical optics.2014 Aug;8600625104412
Zylka et al. reply.Zylka, Mark J; Philpot, Ben D; King, Ian FNature.2014 Aug 7;E225100485
Improving the serum stability of site-specific antibody conjugates with sulfone linkers.Patterson, James T; Asano, Shigehiro; Li, Xiuling; Rader, Christoph; Barbas 3rd, Carlos FBioconjugate chemistry.2014 Aug 20;1402-725099687
''Utilizing'' signal detection theory.Lynn, Spencer K; Barrett, Lisa FeldmanPsychological science.2014 Sep;1663-7325097061
Promising and delivering gene therapies for vision loss.Carvalho, Livia S; Vandenberghe, Luk HVision research2014 Aug 2NULL25094052
Efficient transduction and optogenetic stimulation of retinal bipolar cells by a synthetic adeno-associated virus capsid and promoter.Cronin, Therese; Vandenberghe, Luk H; Hantz, Peter; Juttner, Josephine; Reimann, Andreas; Kacso, Agota-Enikýý; Huckfeldt, Rachel M; Busskamp, Volker; Kohler, Hubertus; Lagali, Pamela S; Roska, Botond; Bennett, JeanEMBO molecular medicine.2014 Sep;1175-9025092770
Sensory Integration in Mouse Insular Cortex Reflects GABA Circuit Maturation.Gogolla, Nadine; Takesian, Anne E; Feng, Guoping; Fagiolini, Michela; Hensch, Takao KNeuron2014 Aug 20894-90525088363
A method for the second-site screening of K-Ras in the presence of a covalently attached first-site ligand.Sun, Qi; Phan, Jason; Friberg, Anders R; Camper, DeMarco V; Olejniczak, Edward T; Fesik, Stephen WJournal of biomolecular NMR.2014 Sep;4-Nov25087006
H3K4me3 Breadth Is Linked to Cell Identity and Transcriptional Consistency.Benayoun, Berenice A; Pollina, Elizabeth A; Ucar, Duygu; Mahmoudi, Salah; Karra, Kalpana; Wong, Edith D; Devarajan, Keerthana; Daugherty, Aaron C; Kundaje, Anshul B; Mancini, Elena; Hitz, Benjamin C; Gupta, Rakhi; Rando, Thomas A; Baker, Julie C; Snyder, Cell2014 Jul 31673-8825083876
DNA methylation dynamics of the human preimplantation embryo.Smith, Zachary D; Chan, Michelle M; Humm, Kathryn C; Karnik, Rahul; Mekhoubad, Shila; Regev, Aviv; Eggan, Kevin; Meissner, AlexanderNature2014 Jul 31611-525079558
Three-dimensional arbitrary trajectory scanning photoacoustic microscopy.Yeh, Chenghung; Soetikno, Brian; Hu, Song; Maslov, Konstantin I; Wang, Lihong VJournal of biophotonics2014 Jul 30NULL25077689
Improved vectors and genome-wide libraries for CRISPR screening.Sanjana, Neville E; Shalem, Ophir; Zhang, FengNature methods.2014 Aug;783-425075903
Neural control and modulation of swimming speed in the larval zebrafish.Severi, Kristen E; Portugues, Ruben; Marques, Joao C; O'Malley, Donald M; Orger, Michael B; Engert, FlorianNeuron2014 Aug 6692-70725066084
Differential targeting of feline photoreceptors by recombinant adeno-associated viral vectors: implications for preclinical gene therapy trials.Minella, A L; Mowat, F M; Willett, K L; Sledge, D; Bartoe, J T; Bennett, J; Petersen-Jones, S MGene therapy.2014 Oct;913-2025056608
Processing properties of ON and OFF pathways for Drosophila motion detection.Behnia, Rudy; Clark, Damon A; Carter, Adam G; Clandinin, Thomas R; Desplan, ClaudeNature2014 Aug 28427-3025043016
Mechanism of transcriptional bursting in bacteria.Chong, Shasha; Chen, Chongyi; Ge, Hao; Xie, X SunneyCell2014 Jul 17314-2625036631
Structural characterization of anti-inflammatory immunoglobulin G Fc proteins.Ahmed, Alysia A; Giddens, John; Pincetic, Andrew; Lomino, Joseph V; Ravetch, Jeffrey V; Wang, Lai-Xi; Bjorkman, Pamela JJournal of molecular biology.2014 Sep 9;3166-7925036289
Quantitative determinants of aerobic glycolysis identify flux through the enzyme GAPDH as a limiting step.Shestov, Alexander A; Liu, Xiaojing; Ser, Zheng; Cluntun, Ahmad A; Hung, Yin P; Huang, Lei; Kim, Dongsung; Le, Anne; Yellen, Gary; Albeck, John G; Locasale, Jason WeLife.2014;25009227
Generating human neurons in vitro and using them to understand neuropsychiatric disease.Pa?ca, Sergiu P; Panagiotakos, Georgia; Dolmetsch, Ricardo EAnnual review of neuroscience.2014;479-50125002278
Proteomic mapping of the human mitochondrial intermembrane space in live cells via ratiometric APEX tagging.Hung, Victoria; Zou, Peng; Rhee, Hyun-Woo; Udeshi, Namrata D; Cracan, Valentin; Svinkina, Tanya; Carr, Steven A; Mootha, Vamsi K; Ting, Alice YMolecular cell2014 Jul 17332-4125002142
Stressing the limits of focal adhesion mechanosensitivity.Oakes, Patrick W; Gardel, Margaret LCurrent opinion in cell biology.2014 Oct;68-7324998185
A freely-moving monkey treadmill model.D Foster, Justin; Nuyujukian, Paul; Freifeld, Oren; Gao, Hua; Walker, Ross; I Ryu, Stephen; H Meng, Teresa; Murmann, Boris; J Black, Michael; V Shenoy, KrishnaJournal of neural engineering2014 Aug4602024995476
Activation and measurement of free whisking in the lightly anesthetized rodent.Moore, Jeffrey D; Deschenes, Martin; Kurnikova, Anastasia; Kleinfeld, DavidNature protocols2014 Aug1792-80224992095
Engineered red blood cells as carriers for systemic delivery of a wide array of functional probes.Shi, Jiahai; Kundrat, Lenka; Pishesha, Novalia; Bilate, Angelina; Theile, Chris; Maruyama, Takeshi; Dougan, Stephanie K; Ploegh, Hidde L; Lodish, Harvey FProceedings of the National Academy of Sciences of the United States of America.2014 Jul 15;10131-624982154
Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5' sites.Schwartz, Schraga; Mumbach, Maxwell R; Jovanovic, Marko; Wang, Tim; Maciag, Karolina; Bushkin, G Guy; Mertins, Philipp; Ter-Ovanesyan, Dmitry; Habib, Naomi; Cacchiarelli, Davide; Sanjana, Neville E; Freinkman, Elizaveta; Pacold, Michael E; Satija, Rahul; Cell reports2014 Jul 10284-9624981863
Comparative genetics of longevity and cancer: insights from long-lived rodents.Gorbunova, Vera; Seluanov, Andrei; Zhang, Zhengdong; Gladyshev, Vadim N; Vijg, JanNature reviews. Genetics.2014 Aug;531-4024981598
CANDO and the infinite drug discovery frontier.Minie, Mark; Chopra, Gaurav; Sethi, Geetika; Horst, Jeremy; White, George; Roy, Ambrish; Hatti, Kaushik; Samudrala, RamDrug discovery today2014 Jun 26NULL24980786
In vivo optically encoded photoacoustic flowgraphy.Zhang, Ruiying; Wang, Lidai; Yao, Junjie; Yeh, Cheng-Hung; Wang, Lihong VOptics letters.2014 Jul 1;3814-724978744
Continuous scanning of a time-reversed ultrasonically encoded optical focus by reflection-mode digital phase conjugation.Suzuki, Yuta; Tay, Jian Wei; Yang, Qiang; Wang, Lihong VOptics letters2014 Jun 153441-424978506
The cultural evolution of emergent group-level traits.Smaldino, Paul EThe Behavioral and brain sciences2014 Jun243-5424970399
Optical-Resolution Photoacoustic Microscopy for Volumetric and Spectral Analysis of Histological and Immunochemical Samples.Zhang, Yu Shrike; Yao, Junjie; Zhang, Chi; Li, Lei; Wang, Lihong V; Xia, YounanAngewandte Chemie (International ed. in English)2014 Jun 24NULL24961608
Protein capsules with cross-linked, semipermeable, and enzyme-degradable surface barriers for controlled release.Zhou, Jianhua; Hyun, Dong Choon; Liu, Hang; Wu, Hongkai; Xia, YounanMacromolecular rapid communications.2014 Aug;1436-4224957975
Genomics: moving behavioural ecology beyond the phenotypic gambit.Rittschof, Clare C; Robinson, Gene EAnimal behaviour2014 Jun 1263-27024954950
High-sensitivity measurements of multiple kinase activities in live single cells.Regot, Sergi; Hughey, Jacob J; Bajar, Bryce T; Carrasco, Silvia; Covert, Markus WCell2014 Jun 191724-3424949979
Genome-wide identification and functional analysis of Apobec-1 mediated C-to-U RNA editing in mouse small intestine and liver.Blanc, Valerie; Park, Eddie; Schaefer, Sabine; Miller, Melanie; Lin, Yiing; Kennedy, Susan; Billing, Anja M; Ben Hamidane, Hisham; Graumann, Johannes; Mortazavi, Ali; Nadeau, Joseph H; Davidson, Nicholas OGenome biology2014 Jun 19R7924946870
Elucidation of pseurotin biosynthetic pathway points to trans-acting C-methyltransferase: generation of chemical diversity.Tsunematsu, Yuta; Fukutomi, Manami; Saruwatari, Takayoshi; Noguchi, Hiroshi; Hotta, Kinya; Tang, Yi; Watanabe, KenjiAngewandte Chemie (International ed. in English).2014 Aug 4;8475-924939566
Resident fibroblast lineages mediate pressure overload-induced cardiac fibrosis.Moore-Morris, Thomas; Guimaraes-Camboa, Nuno; Banerjee, Indroneal; Zambon, Alexander C; Kisseleva, Tatiana; Velayoudon, Aurelie; Stallcup, William B; Gu, Yusu; Dalton, Nancy D; Cedenilla, Marta; Gomez-Amaro, Rafael; Zhou, Bin; Brenner, David A; Peterson, The Journal of clinical investigation2014 Jul 12921-3424937432
Protein delivery using Cys2-His2 zinc-finger domains.Gaj, Thomas; Liu, Jia; Anderson, Kimberly E; Sirk, Shannon J; Barbas 3rd, Carlos FACS chemical biology.2014 Aug 15;1662-724936957
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation.Shalek, Alex K; Satija, Rahul; Shuga, Joe; Trombetta, John J; Gennert, Dave; Lu, Diana; Chen, Peilin; Gertner, Rona S; Gaublomme, Jellert T; Yosef, Nir; Schwartz, Schraga; Fowler, Brian; Weaver, Suzanne; Wang, Jing; Wang, Xiaohui; Ding, Ruihua; RaychowdhuNature2014 Jun 19363-924919153
Shh-proteoglycan interactions regulate maturation of olfactory glomerular circuitry.Persson, Laura; Witt, Rochelle M; Galligan, Meghan; Greer, Paul L; Eisner, Adriana; Pazyra-Murphy, Maria F; Datta, Sandeep R; Segal, Rosalind ADevelopmental neurobiology2014 Jun 10NULL24913191
Differences in neural circuitry guiding behavioral responses to polarized light presented to either the dorsal or ventral retina in Drosophila.Velez, Mariel M; Gohl, Daryl; Clandinin, Thomas R; Wernet, Mathias FJournal of neurogenetics.2014 Sep-Dec;348-6024912584
Gender moderates the effect of oxytocin on social judgments.Hoge, Elizabeth A; Anderson, Eric; Lawson, Elizabeth A; Bui, Eric; Fischer, Laura E; Khadge, Shradha D; Barrett, Lisa Feldman; Simon, Naomi MHuman psychopharmacology2014 May299-30424911580
Eosinophils and type 2 cytokine signaling in macrophages orchestrate development of functional beige fat.Qiu, Yifu; Nguyen, Khoa D; Odegaard, Justin I; Cui, Xiaojin; Tian, Xiaoyu; Locksley, Richard M; Palmiter, Richard D; Chawla, AjayCell2014 Jun 51292-30824906148
Development and applications of CRISPR-Cas9 for genome engineering.Hsu, Patrick D; Lander, Eric S; Zhang, FengCell.2014 Jun 5;1262-7824906146
Photoacoustic microscopy and computed tomography: from bench to bedside.Wang, Lihong V; Gao, LiangAnnual review of biomedical engineering2014 Jul 11155-8524905877
Measuring Fate and Rate of Single-Molecule Competition of Amplification and Restriction Digestion, and Its Use for Rapid Genotyping Tested with Hepatitis C Viral RNA.Sun, Bing; Rodriguez-Manzano, Jesus; Selck, David A; Khorosheva, Eugenia; Karymov, Mikhail A; Ismagilov, Rustem FAngewandte Chemie (International ed. in English)2014 Jun 2NULL24889060
Catheter-based photoacoustic endoscope.Yang, Joon-Mo; Li, Chiye; Chen, Ruimin; Zhou, Qifa; Shung, K Kirk; Wang, Lihong VJournal of biomedical optics.2014 Jun;6600124887743
Leptin signaling in astrocytes regulates hypothalamic neuronal circuits and feeding.Kim, Jae Geun; Suyama, Shigetomo; Koch, Marco; Jin, Sungho; Argente-Arizon, Pilar; Argente, Jesus; Liu, Zhong-Wu; Zimmer, Marcelo R; Jeong, Jin Kwon; Szigeti-Buck, Klara; Gao, Yuanqing; Garcia-Caceres, Cristina; Yi, Chun-Xia; Salmaso, Natalina; Vaccarino,Nature neuroscience2014 Jul908-1024880214
Synthetic zinc finger proteins: the advent of targeted gene regulation and genome modification technologies.Gersbach, Charles A; Gaj, Thomas; Barbas 3rd, Carlos FAccounts of chemical research.2014 Aug 19;2309-1824877793
Amygdala task-evoked activity and task-free connectivity independently contribute to feelings of arousal.Touroutoglou, Alexandra; Bickart, Kevin C; Barrett, Lisa Feldman; Dickerson, Bradford CHuman brain mapping.2014 Oct;5316-2724862171
Oncogenic transformation of diverse gastrointestinal tissues in primary organoid culture.Li, Xingnan; Nadauld, Lincoln; Ootani, Akifumi; Corney, David C; Pai, Reetesh K; Gevaert, Olivier; Cantrell, Michael A; Rack, Paul G; Neal, James T; Chan, Carol W-M; Yeung, Trevor; Gong, Xue; Yuan, Jenny; Wilhelmy, Julie; Robine, Sylvie; Attardi, Laura D;Nature medicine2014 Jul769-7724859528
Oncogenic transformation of diverse gastrointestinal tissues in primary organoid culture.Li, Xingnan; Nadauld, Lincoln; Ootani, Akifumi; Corney, David C; Pai, Reetesh K; Gevaert, Olivier; Cantrell, Michael A; Rack, Paul G; Neal, James T; Chan, Carol W-M; Yeung, Trevor; Gong, Xue; Yuan, Jenny; Wilhelmy, Julie; Robine, Sylvie; Attardi, Laura D;Nature medicine2014 May 25NULL24859528
Two-photon neuronal and astrocytic stimulation with azobenzene-based photoswitches.Izquierdo-Serra, Mercè; Gascón-Moya, Marta; Hirtz, Jan J; Pittolo, Silvia; Poskanzer, Kira E; Ferrer, Èric; Alibés, Ramon; Busqué, Félix; Yuste, Rafael; Hernando, Jordi; Gorostiza, PauJournal of the American Chemical Society.2014 Jun 18;8693-70124857186
Image-based left ventricular shape analysis for sudden cardiac death risk stratification.Vadakkumpadan, Fijoy; Trayanova, Natalia; Wu, Katherine CHeart rhythm : the official journal of the Heart Rhythm Society.2014 Oct;1693-70024854217
Fungal Polyketide Synthase Product Chain-Length Control by Partnering Thiohydrolase.Zabala, Angelica O; Chooi, Yit-Heng; Choi, Moon Seok; Lin, Hsiao-Ching; Tang, YiACS chemical biology2014 May 29NULL24845309
Astrocytes and Huntington's disease.Khakh, Baljit S; Sofroniew, Michael VACS chemical neuroscience.2014 Jul 16;494-624842291
A carbonate-forming Baeyer-Villiger monooxygenase.Hu, Youcai; Dietrich, David; Xu, Wei; Patel, Ashay; Thuss, Justin A J; Wang, Jingjing; Yin, Wen-Bing; Qiao, Kangjian; Houk, K N; Vederas, John C; Tang, YiNature chemical biology2014 May 18NULL24838010
Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy.Prevedel, Robert; Yoon, Young-Gyu; Hoffmann, Maximilian; Pak, Nikita; Wetzstein, Gordon; Kato, Saul; Schrodel, Tina; Raskar, Ramesh; Zimmer, Manuel; Boyden, Edward S; Vaziri, AlipashaNature methods2014 May 18NULL24836920
Gender differences in oxytocin-associated disruption of decision bias during emotion perception.Lynn, Spencer K; Hoge, Elizabeth A; Fischer, Laura E; Barrett, Lisa Feldman; Simon, Naomi MPsychiatry research2014 Apr 26NULL24814142
Walking Drosophila align with the e-vector of linearly polarized light through directed modulation of angular acceleration.Velez, Mariel M; Wernet, Mathias F; Clark, Damon A; Clandinin, Thomas RJournal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology2014 Jun603-1424810784
Nerve guidance conduits based on double-layered scaffolds of electrospun nanofibers for repairing the peripheral nervous system.Xie, Jingwei; MacEwan, Matthew R; Liu, Wenying; Jesuraj, Nithya; Li, Xiaoran; Hunter, Daniel; Xia, YounanACS applied materials & interfaces2014 Jun 259472-8024806389
Antibiotics induce redox-related physiological alterations as part of their lethality.Dwyer, Daniel J; Belenky, Peter A; Yang, Jason H; MacDonald, I Cody; Martell, Jeffrey D; Takahashi, Noriko; Chan, Clement T Y; Lobritz, Michael A; Braff, Dana; Schwarz, Eric G; Ye, Jonathan D; Pati, Mekhala; Vercruysse, Maarten; Ralifo, Paul S; Allison, KProceedings of the National Academy of Sciences of the United States of America2014 May 20E2100-924803433
New insights into defibrillation of the heart from realistic simulation studies.Trayanova, Natalia A; Rantner, Lukas JEuropace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology.2014 May;705-1324798960
Loss of *-catenin triggers oxidative stress and impairs hematopoietic regeneration.Lento, William; Ito, Takahiro; Zhao, Chen; Harris, Jeffrey R; Huang, Wei; Jiang, Chen; Owzar, Kouros; Piryani, Sadhna; Racioppi, Luigi; Chao, Nelson; Reya, TannishthaGenes & development2014 May 1995-100424788518
Global microRNA depletion suppresses tumor angiogenesis.Chen, Sidi; Xue, Yuan; Wu, Xuebing; Le, Cong; Bhutkar, Arjun; Bell, Eric L; Zhang, Feng; Langer, Robert; Sharp, Phillip AGenes & development.2014 May 15;1054-6724788094
Inter-individual variation in DNA repair capacity: A need for multi-pathway functional assays to promote translational DNA repair research.Nagel, Zachary D; Chaim, Isaac A; Samson, Leona DDNA repair2014 Apr 26NULL24780560
Somatic mutation as a mechanism of Wnt/*-catenin pathway activation in CLL.Wang, Lili; Shalek, Alex K; Lawrence, Mike; Ding, Ruihua; Gaublomme, Jellert T; Pochet, Nathalie; Stojanov, Petar; Sougnez, Carrie; Shukla, Sachet A; Stevenson, Kristen E; Zhang, Wandi; Wong, Jessica; Sievers, Quinlan L; MacDonald, Bryan T; Vartanov, Alexander R; Goldstein, Natalie R; Neuberg, Donna; He, Xi; Lander, Eric; Hacohen, Nir; Regev, Aviv; Getz, Gad; Brown, Jennifer R; Park, Hongkun; Wu, Catherine JBlood.2014 Aug 14;1089-9824778153
Chronic, wireless recordings of large-scale brain activity in freely moving rhesus monkeys.Schwarz, David A; Lebedev, Mikhail A; Hanson, Timothy L; Dimitrov, Dragan F; Lehew, Gary; Meloy, Jim; Rajangam, Sankaranarayani; Subramanian, Vivek; Ifft, Peter J; Li, Zheng; Ramakrishnan, Arjun; Tate, Andrew; Zhuang, Katie Z; Nicolelis, Miguel A LNature methods2014 Jun670-624776634
Simultaneous imaging of neural activity in three dimensions.Quirin, Sean; Jackson, Jesse; Peterka, Darcy S; Yuste, RafaelFrontiers in neural circuits.2014;2924772066
Dimeric CRISPR RNA-guided FokI nucleases for highly specific genome editing.Tsai, Shengdar Q; Wyvekens, Nicolas; Khayter, Cyd; Foden, Jennifer A; Thapar, Vishal; Reyon, Deepak; Goodwin, Mathew J; Aryee, Martin J; Joung, J KeithNature biotechnology2014 Jun569-7624770325
Constant growth rate can be supported by decreasing energy flux and increasing aerobic glycolysis.Slavov, Nikolai; Budnik, Bogdan A; Schwab, David; Airoldi, Edoardo M; van Oudenaarden, AlexanderCell reports2014 May 8705-1424767987
A PKA activity sensor for quantitative analysis of endogenous GPCR signaling via 2-photon FRET-FLIM imaging.Chen, Yao; Saulnier, Jessica L; Yellen, Gary; Sabatini, Bernardo LFrontiers in pharmacology20145624765076
Mathematical approaches to understanding and imaging atrial fibrillation: significance for mechanisms and management.Trayanova, Natalia ACirculation research.2014 Apr 25;1516-3124763468
Vasoactive intestinal polypeptide mediates circadian rhythms in mammalian olfactory bulb and olfaction.Miller, Jae-Eun Kang; Granados-Fuentes, Daniel; Wang, Thomas; Marpegan, Luciano; Holy, Timothy E; Herzog, Erik DThe Journal of neuroscience : the official journal of the Society for Neuroscience2014 Apr 236040-624760863
Imaging neural spiking in brain tissue using FRET-opsin protein voltage sensors.Gong, Yiyang; Wagner, Mark J; Zhong Li, Jin; Schnitzer, Mark JNature communications2014367424755708
Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells.Wu, Xuebing; Scott, David A; Kriz, Andrea J; Chiu, Anthony C; Hsu, Patrick D; Dadon, Daniel B; Cheng, Albert W; Trevino, Alexandro E; Konermann, Silvana; Chen, Sidi; Jaenisch, Rudolf; Zhang, Feng; Sharp, Phillip ANature biotechnology.2014 Jul;670-624752079
Population code in mouse V1 facilitates readout of natural scenes through increased sparseness.Froudarakis, Emmanouil; Berens, Philipp; Ecker, Alexander S; Cotton, R James; Sinz, Fabian H; Yatsenko, Dimitri; Saggau, Peter; Bethge, Matthias; Tolias, Andreas SNature neuroscience2014 Jun851-724747577
Small-molecule RORýýt antagonists inhibit T helper 17 cell transcriptional network by divergent mechanisms.Xiao, Sheng; Yosef, Nir; Yang, Jianfei; Wang, Yonghui; Zhou, Ling; Zhu, Chen; Wu, Chuan; Baloglu, Erkan; Schmidt, Darby; Ramesh, Radha; Lobera, Mercedes; Sundrud, Mark S; Tsai, Pei-Yun; Xiang, Zhijun; Wang, Jinsong; Xu, Yan; Lin, Xichen; Kretschmer, KarstImmunity2014 Apr 17477-8924745332
Synthetic RNA switches for yeast metabolic engineering: screening recombinant enzyme libraries.Michener, Joshua K; Smolke, Christina DMethods in molecular biology (Clifton, N.J.).2014;125-3624744030
Conditions and constraints for astrocyte calcium signaling in the hippocampal mossy fiber pathway.Haustein, Martin D; Kracun, Sebastian; Lu, Xiao-Hong; Shih, Tiffany; Jackson-Weaver, Olan; Tong, Xiaoping; Xu, Ji; Yang, X William; O'Dell, Thomas J; Marvin, Jonathan S; Ellisman, Mark H; Bushong, Eric A; Looger, Loren L; Khakh, Baljit SNeuron.2014 Apr 16;413-2924742463
Representing sex in the brain, one module at a time.Yang, Cindy F; Shah, Nirao MNeuron2014 Apr 16261-7824742456
Protein-to-mRNA Ratios Are Conserved between Pseudomonas aeruginosa Strains.Kwon, Taejoon; Huse, Holly K; Vogel, Christine; Whiteley, Marvin; Marcotte, Edward MJournal of proteome research2014 Apr 17NULL24742327
Calibration-free structured-illumination photoacoustic flowgraphy of transverse flow in scattering media.Yao, Junjie; Gilson, Rebecca C; Maslov, Konstantin I; Wang, Lidai; Wang, Lihong VJournal of biomedical optics2014 Apr4600724718385
Perceptions of emotion from facial expressions are not culturally universal: evidence from a remote culture.Gendron, Maria; Roberson, Debi; van der Vyver, Jacoba Marietta; Barrett, Lisa FeldmanEmotion (Washington, D.C.)2014 Apr251-6224708506
cAMP-PKA phosphorylation of tau confers risk for degeneration in aging association cortex.Carlyle, Becky C; Nairn, Angus C; Wang, Min; Yang, Yang; Jin, Lu E; Simen, Arthur A; Ramos, Brian P; Bordner, Kelly A; Craft, George E; Davies, Peter; Pletikos, Mihovil; ?estan, Nenad; Arnsten, Amy F T; Paspalas, Constantinos DProceedings of the National Academy of Sciences of the United States of America.2014 Apr 1;5036-4124707050
Pathways Disrupted in Human ALS Motor Neurons Identified through Genetic Correction of Mutant SOD1.Kiskinis, Evangelos; Sandoe, Jackson; Williams, Luis A; Boulting, Gabriella L; Moccia, Rob; Wainger, Brian J; Han, Steve; Peng, Theodore; Thams, Sebastian; Mikkilineni, Shravani; Mellin, Cassidy; Merkle, Florian T; Davis-Dusenbery, Brandi N; Ziller, MichaCell stem cell2014 Jun 5781-9524704492
Influenza A H1N1 pandemic strain evolution--divergence and the potential for antigenic drift variants.Klein, Eili Y; Serohijos, Adrian W R; Choi, Jeong-Mo; Shakhnovich, Eugene I; Pekosz, AndrewPloS one2014e9363224699432
State dependence of noise correlations in macaque primary visual cortex.Ecker, Alexander S; Berens, Philipp; Cotton, R James; Subramaniyan, Manivannan; Denfield, George H; Cadwell, Cathryn R; Smirnakis, Stelios M; Bethge, Matthias; Tolias, Andreas SNeuron2014 Apr 2235-4824698278
Chaperones and cardiac misfolding protein diseases.Christians, Elisabeth S; Mustafi, Soumyajit B; Benjamin, Ivor JCurrent protein & peptide science2014 May189-20424694370
Urogenital photoacoustic endoscope.Li, Chiye; Yang, Joon-Mo; Chen, Ruimin; Yeh, Cheng-Hung; Zhu, Liren; Maslov, Konstantin; Zhou, Qifa; Kirk Shung, K; Wang, Lihong VOptics letters2014 Mar 151473-624690816
Improved in vitro efficacy of gold nanoconstructs by increased loading of G-quadruplex aptamer.Dam, Duncan Hieu M; Lee, Raymond C; Odom, Teri WNano letters2014 May 142843-824689438
Astrocyte Kir4.1 ion channel deficits contribute to neuronal dysfunction in Huntington's disease model mice.Tong, Xiaoping; Ao, Yan; Faas, Guido C; Nwaobi, Sinifunanya E; Xu, Ji; Haustein, Martin D; Anderson, Mark A; Mody, Istvan; Olsen, Michelle L; Sofroniew, Michael V; Khakh, Baljit SNature neuroscience.2014 May;694-70324686787
Fully motorized optical-resolution photoacoustic microscopy.Li, Lei; Yeh, Chenghung; Hu, Song; Wang, Lidai; Soetikno, Brian T; Chen, Ruimin; Zhou, Qifa; Shung, K Kirk; Maslov, Konstantin I; Wang, Lihong VOptics letters2014 Apr 12117-2024686689
Comparison of the theoretical and real-world evolutionary potential of a genetic circuit.Razo-Mejia, M; Boedicker, J Q; Jones, D; Deluna, A; Kinney, J B; Phillips, RPhysical biology2014 Apr2600524685590
Proteomic identification of monoclonal antibodies from serum.Boutz, Daniel R; Horton, Andrew P; Wine, Yariv; Lavinder, Jason J; Georgiou, George; Marcotte, Edward MAnalytical chemistry2014 May 204758-6624684310
Transcriptional profiling of cells sorted by RNA abundance.Klemm, Sandy; Semrau, Stefan; Wiebrands, Kay; Mooijman, Dylan; Faddah, Dina A; Jaenisch, Rudolf; van Oudenaarden, AlexanderNature methods2014 May549-5124681693
Signaling by IL-6 promotes alternative activation of macrophages to limit endotoxemia and obesity-associated resistance to insulin.Mauer, Jan; Chaurasia, Bhagirath; Goldau, Julia; Vogt, Merly C; Ruud, Johan; Nguyen, Khoa D; Theurich, Sebastian; Hausen, A Christine; Schmitz, Joel; Bronneke, Hella S; Estevez, Emma; Allen, Tamara L; Mesaros, Andrea; Partridge, Linda; Febbraio, Mark A; CNature immunology2014 May423-3024681566
Minireview: Metabolism of female reproduction: regulatory mechanisms and clinical implications.Seli, Emre; Babayev, Elnur; Collins, Stephen C; Nemeth, Gabor; Horvath, Tamas LMolecular endocrinology (Baltimore, Md.)2014 Jun790-80424678733
Using SV119-Gold Nanocage Conjugates to Eradicate Cancer Stem Cells Through a Combination of Photothermal and Chemo Therapies.Sun, Tianmeng; Wang, Yi; Wang, Yucai; Xu, Jinbin; Zhao, Xin; Vangveravong, Suwanna; Mach, Robert H; Xia, YounanAdvanced healthcare materials2014 Mar 26NULL24677807
REST and stress resistance in ageing and Alzheimer's disease.Lu, Tao; Aron, Liviu; Zullo, Joseph; Pan, Ying; Kim, Haeyoung; Chen, Yiwen; Yang, Tun-Hsiang; Kim, Hyun-Min; Drake, Derek; Liu, X Shirley; Bennett, David A; Colaiacovo, Monica P; Yankner, Bruce ANature2014 Mar 27448-5424670762
The new century of the brain.Yuste, Rafael; Church, George MScientific American.2014 Mar;38-4524660326
The Determinants of Federal and State Enforcement of Workplace Safety Regulations: OSHA Inspections 1990-2010.Jung, Juergen; Makowsky, Michael DJournal of regulatory economics2014 Feb 1Jan-3324659856
Optimizing cardiac resynchronization therapy to minimize ATP consumption heterogeneity throughout the left ventricle: a simulation analysis using a canine heart failure model.Hu, Yuxuan; Gurev, Viatcheslav; Constantino, Jason; Trayanova, NataliaHeart rhythm : the official journal of the Heart Rhythm Society.2014 Jun;1063-924657430
Whole-brain activity maps reveal stereotyped, distributed networks for visuomotor behavior.Portugues, Ruben; Feierstein, Claudia E; Engert, Florian; Orger, Michael BNeuron2014 Mar 191328-4324656252
Metabolic regulation of immune responses.Ganeshan, Kirthana; Chawla, AjayAnnual review of immunology2014609-3424655299
Intention estimation in brain-machine interfaces.Fan, Joline M; Nuyujukian, Paul; Kao, Jonathan C; Chestek, Cynthia A; Ryu, Stephen I; Shenoy, Krishna VJournal of neural engineering2014 Feb1600424654266
Genetically encoded molecular probes to visualize and perturb signaling dynamics in living biological systems.Sample, Vedangi; Mehta, Sohum; Zhang, JinJournal of cell science2014 Mar 151151-6024634506
Reconstitution of contractile actomyosin arrays.Murrell, Michael; Thoresen, Todd; Gardel, MargaretMethods in enzymology.2014;265-8224630112
Realizing the potential of synthetic biology.Church, George M; Elowitz, Michael B; Smolke, Christina D; Voigt, Christopher A; Weiss, RonNature reviews. Molecular cell biology.2014 Apr;289-9424622617
Plasmonics-enhanced and optically modulated delivery of gold nanostars into brain tumor.Yuan, Hsiangkuo; Wilson, Christy M; Xia, Jun; Doyle, Sarah L; Li, Shuqin; Fales, Andrew M; Liu, Yang; Ozaki, Ema; Mulfaul, Kelly; Hanna, Gabi; Palmer, Gregory M; Wang, Lihong V; Grant, Gerald A; Vo-Dinh, TuanNanoscale2014 Apr 214078-8224619405
Subunit composition of glutamate and gamma-aminobutyric acid receptors in status epilepticus.Loddenkemper, Tobias; Talos, Delia M; Cleary, Ryan T; Joseph, Annelise; Sanchez Fernandez, Ivan; Alexopoulos, Andreas; Kotagal, Prakash; Najm, Imad; Jensen, Frances EEpilepsy research2014 May605-1524613745
The transcription factor titration effect dictates level of gene expression.Brewster, Robert C; Weinert, Franz M; Garcia, Hernan G; Song, Dan; Rydenfelt, Mattias; Phillips, RobCell2014 Mar 131312-2324612990
CMV Infection, TLR-2 and -4 Expression, and Cytokine Profiles in Early-Onset Preeclampsia with HELLP Syndrome.Xie, Fang; von Dadelszen, Peter; Nadeau, JosephAmerican journal of reproductive immunology (New York, N.Y. : 1989)2014 Feb 24NULL24612145
Enhancing the specificity of recombinase-mediated genome engineering through dimer interface redesign.Gaj, Thomas; Sirk, Shannon J; Tingle, Ryan D; Mercer, Andrew C; Wallen, Mark C; Barbas 3rd, Carlos FJournal of the American Chemical Society2014 Apr 25047-5624611715
Cross-linking in the silks of bees, ants and hornets.Campbell, Peter M; Trueman, Holly E; Zhang, Qiang; Kojima, Katsura; Kameda, Tsunenori; Sutherland, Tara DInsect biochemistry and molecular biology2014 May40-5024607851
Dependence of optical scattering from Intralipid in gelatin-gel based tissue-mimicking phantoms on mixing temperature and time.Lai, Puxiang; Xu, Xiao; Wang, Lihong VJournal of biomedical optics2014 Mar3500224604534
Common genetic variants modulate pathogen-sensing responses in human dendritic cells.Lee, Mark N; Ye, Chun; Villani, Alexandra-Chloe; Raj, Towfique; Li, Weibo; Eisenhaure, Thomas M; Imboywa, Selina H; Chipendo, Portia I; Ran, F Ann; Slowikowski, Kamil; Ward, Lucas D; Raddassi, Khadir; McCabe, Cristin; Lee, Michelle H; Frohlich, Irene Y; HScience (New York, N.Y.)2014 Mar 7124698024604203
Medicine. Combating evolution to fight disease.Rosenberg, Susan M; Queitsch, ChristineScience (New York, N.Y.)2014 Mar 71088-924604189
Maternal nutrition induces pervasive gene expression changes but no detectable DNA methylation differences in the liver of adult offspring.Cannon, Matthew V; Buchner, David A; Hester, James; Miller, Hadley; Sehayek, Ephraim; Nadeau, Joseph H; Serre, DavidPloS one2014e9033524594983
Recasting the theory of mosquito-borne pathogen transmission dynamics and control.Smith, David L; Perkins, T Alex; Reiner Jr, Robert C; Barker, Christopher M; Niu, Tianchan; Chaves, Luis Fernando; Ellis, Alicia M; George, Dylan B; Le Menach, Arnaud; Pulliam, Juliet R C; Bisanzio, Donal; Buckee, Caroline; Chiyaka, Christinah; Cummings, Transactions of the Royal Society of Tropical Medicine and Hygiene2014 Apr185-9724591453
Calibration-free absolute quantification of particle concentration by statistical analyses of photoacoustic signals in vivo.Zhou, Yong; Yao, Junjie; Maslov, Konstantin I; Wang, Lihong VJournal of biomedical optics2014 Mar3700124589987
Integrated photoacoustic, confocal, and two-photon microscope.Rao, Bin; Soto, Florentina; Kerschensteiner, Daniel; Wang, Lihong VJournal of biomedical optics2014 Mar3600224589986
CRISPR-Cas systems for editing, regulating and targeting genomes.Sander, Jeffry D; Joung, J KeithNature biotechnology2014 Apr347-5524584096
Lestaurtinib (CEP-701) attenuates "second hit" kainic acid-induced seizures following early life hypoxic seizures.Obeid, Makram; Rosenberg, Evan C; Klein, Peter M; Jensen, Frances EEpilepsy research2014 May806-1024582454
Statistical mechanical model of coupled transcription from multiple promoters due to transcription factor titration.Rydenfelt, Mattias; Cox, Robert Sidney; Garcia, Hernan; Phillips, RobPhysical review. E, Statistical, nonlinear, and soft matter physics2014 Jan1270224580252
Generation of complexity in fungal terpene biosynthesis: discovery of a multifunctional cytochrome P450 in the fumagillin pathway.Lin, Hsiao-Ching; Tsunematsu, Yuta; Dhingra, Sourabh; Xu, Wei; Fukutomi, Manami; Chooi, Yit-Heng; Cane, David E; Calvo, Ana M; Watanabe, Kenji; Tang, YiJournal of the American Chemical Society2014 Mar 194426-3624568283
The future of whole-cell modeling.Macklin, Derek N; Ruggero, Nicholas A; Covert, Markus WCurrent opinion in biotechnology2014 Feb 17111-11524556244
Approach for targeting Ras with small molecules that activate SOS-mediated nucleotide exchange.Burns, Michael C; Sun, Qi; Daniels, R Nathan; Camper, DeMarco; Kennedy, J Phillip; Phan, Jason; Olejniczak, Edward T; Lee, Taekyu; Waterson, Alex G; Rossanese, Olivia W; Fesik, Stephen WProceedings of the National Academy of Sciences of the United States of America2014 Mar 43401-624550516
Kinetic and equilibrium binding characterization of aptamers to small molecules using a label-free, sensitive, and scalable platform.Chang, Andrew L; McKeague, Maureen; Liang, Joe C; Smolke, Christina DAnalytical chemistry.2014 Apr 1;3273-824548121
fast_protein_cluster: parallel and optimized clustering of large-scale protein modeling data.Hung, Ling-Hong; Samudrala, RamBioinformatics (Oxford, England)2014 Jun 151774-624532722
Verapamil, and its metabolite norverapamil, inhibit macrophage-induced, bacterial efflux pump-mediated tolerance to multiple anti-tubercular drugs.Adams, Kristin N; Szumowski, John D; Ramakrishnan, LalitaThe Journal of infectious diseases.2014 Aug 1;456-6624532601
Broad specificity profiling of TALENs results in engineered nucleases with improved DNA-cleavage specificity.Guilinger, John P; Pattanayak, Vikram; Reyon, Deepak; Tsai, Shengdar Q; Sander, Jeffry D; Joung, J Keith; Liu, David RNature methods2014 Apr429-3524531420
Statistical modeling of behavioral dynamics during propofol-induced loss of consciousness.Wong, Kin Foon Kevin; Smith, Anne C; Pierce, Eric T; Harrell, P Grace; Walsh, John L; Salazar-Gomez, Andres Felipe; Tavares, Casie L; Purdon, Patrick L; Brown, Emery NJournal of neuroscience methods2014 Apr 3065-7424530701
Crystal structure of Cas9 in complex with guide RNA and target DNA.Nishimasu, Hiroshi; Ran, F Ann; Hsu, Patrick D; Konermann, Silvana; Shehata, Soraya I; Dohmae, Naoshi; Ishitani, Ryuichiro; Zhang, Feng; Nureki, OsamuCell2014 Feb 27935-4924529477
Structural insights on the role of antibodies in HIV-1 vaccine and therapy.West Jr, Anthony P; Scharf, Louise; Scheid, Johannes F; Klein, Florian; Bjorkman, Pamela J; Nussenzweig, Michel CCell2014 Feb 13633-4824529371
Lipid Modulation of Calcium Flux through CaV2.3 Regulates Acrosome Exocytosis and Fertilization.Cohen, Roy; Buttke, Danielle E; Asano, Atsushi; Mukai, Chinatsu; Nelson, Jacquelyn L; Ren, Dongjun; Miller, Richard J; Cohen-Kutner, Moshe; Atlas, Daphne; Travis, Alexander JDevelopmental cell2014 Feb 10310-2124525187
Dissecting genomic diversity, one cell at a time.Blainey, Paul C; Quake, Stephen RNature methods2014 Jan19-2124524132
Photoacoustic thermography of tissue.Ke, Haixin; Tai, Stephen; Wang, Lihong VJournal of biomedical optics20142600324522803
Emotion perception, but not affect perception, is impaired with semantic memory loss.Lindquist, Kristen A; Gendron, Maria; Barrett, Lisa Feldman; Dickerson, Bradford CEmotion (Washington, D.C.)2014 Apr375-8724512242
Central role for RNase YbeY in Hfq-dependent and Hfq-independent small-RNA regulation in bacteria.Pandey, Shree P; Winkler, Jonathan A; Li, Hu; Camacho, Diogo M; Collins, James J; Walker, Graham CBMC genomics201412124511998
Metabolite Profiling of 5'-AMP-Induced Hypometabolism.Zhao, Zhaoyang; Van Oort, Anita; Tao, Zhenyin; O'Brien 3rd, William G; Lee, Cheng ChiMetabolomics : Official journal of the Metabolomic Society2014 Feb 163-7624511307
Visualizing Genomes with Oligopaint FISH Probes.Beliveau, Brian J; Apostolopoulos, Nicholas; Wu, Chao-TingCurrent protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.]201414.23.1-14.23.2024510436
Neural circuits as computational dynamical systems.Sussillo, DavidCurrent opinion in neurobiology2014 Apr156-6324509098
Self-recalibrating classifiers for intracortical brain-computer interfaces.Bishop, William; Chestek, Cynthia C; Gilja, Vikash; Nuyujukian, Paul; Foster, Justin D; Ryu, Stephen I; Shenoy, Krishna V; Yu, Byron MJournal of neural engineering2014 Apr2600124503597
Cultural Relativity in Perceiving Emotion From Vocalizations.Gendron, Maria; Roberson, Debi; van der Vyver, Jacoba Marieta; Barrett, Lisa FeldmanPsychological science2014 Feb 5NULL24501109
Identification of cinnabarinic acid as a novel endogenous aryl hydrocarbon receptor ligand that drives IL-22 production.Lowe, Margaret M; Mold, Jeff E; Kanwar, Bittoo; Huang, Yong; Louie, Alexander; Pollastri, Michael P; Wang, Cuihua; Patel, Gautam; Franks, Diana G; Schlezinger, Jennifer; Sherr, David H; Silverstone, Allen E; Hahn, Mark E; McCune, Joseph MPloS one2014e8787724498387
Institutions and cooperation in an ecology of games.Smaldino, Paul E; Lubell, MarkArtificial life2014207-2124494613
Identification of germline transcriptional regulatory elements in Aedes aegypti.Akbari, Omar S; Papathanos, Philippos A; Sandler, Jeremy E; Kennedy, Katie; Hay, Bruce AScientific reports2014395424492376
Discovery of a potent stapled helix peptide that binds to the 70N domain of replication protein A.Frank, Andreas O; Vangamudi, Bhavatarini; Feldkamp, Michael D; Souza-Fagundes, Elaine M; Luzwick, Jessica W; Cortez, David; Olejniczak, Edward T; Waterson, Alex G; Rossanese, Olivia W; Chazin, Walter J; Fesik, Stephen WJournal of medicinal chemistry2014 Mar 272455-6124491171
Graphene-based contrast agents for photoacoustic and thermoacoustic tomography.Lalwani, Gaurav; Cai, Xin; Nie, Liming; Wang, Lihong V; Sitharaman, BalajiPhotoacoustics2013 Dec 162-6724490141
Sodium current reduction unmasks a structure-dependent substrate for arrhythmogenesis in the normal ventricles.Boyle, Patrick M; Park, Carolyn J; Arevalo, Hermenegild J; Vigmond, Edward J; Trayanova, Natalia APloS one.2014;e8694724489810
Deconvolution of serum cortisol levels by using compressed sensing.Faghih, Rose T; Dahleh, Munther A; Adler, Gail K; Klerman, Elizabeth B; Brown, Emery NPloS one2014e8520424489656
A proteomic survey of widespread protein aggregation in yeast.O'Connell, Jeremy D; Tsechansky, Mark; Royall, Ariel; Boutz, Daniel R; Ellington, Andrew D; Marcotte, Edward MMolecular bioSystems.2014 Apr;851-6124488121
Spatially Fourier-encoded photoacoustic microscopy using a digital micromirror device.Liang, Jinyang; Gao, Liang; Li, Chiye; Wang, Lihong VOptics letters2014 Feb 1430-324487832
Bacteriophages use an expanded genetic code on evolutionary paths to higher fitness.Hammerling, Michael J; Ellefson, Jared W; Boutz, Daniel R; Marcotte, Edward M; Ellington, Andrew D; Barrick, Jeffrey ENature chemical biology2014 Mar178-8024487692
Multicontrast photoacoustic in vivo imaging using near-infrared fluorescent proteins.Krumholz, Arie; Shcherbakova, Daria M; Xia, Jun; Wang, Lihong V; Verkhusha, Vladislav VScientific reports2014393924487319
A general framework for estimating the relative pathogenicity of human genetic variants.Kircher, Martin; Witten, Daniela M; Jain, Preti; O'Roak, Brian J; Cooper, Gregory M; Shendure, JayNature genetics2014 Mar310-524487276
Lis1 regulates asymmetric division in hematopoietic stem cells and in leukemia.Zimdahl, Bryan; Ito, Takahiro; Blevins, Allen; Bajaj, Jeevisha; Konuma, Takaaki; Weeks, Joi; Koechlein, Claire S; Kwon, Hyog Young; Arami, Omead; Rizzieri, David; Broome, H Elizabeth; Chuah, Charles; Oehler, Vivian G; Sasik, Roman; Hardiman, Gary; Reya, TNature genetics2014 Mar245-5224487275
Cortical activity in the null space: permitting preparation without movement.Kaufman, Matthew T; Churchland, Mark M; Ryu, Stephen I; Shenoy, Krishna VNature neuroscience2014 Mar440-824487233
Photoimprint photoacoustic microscopy for three-dimensional label-free subdiffraction imaging.Yao, Junjie; Wang, Lidai; Li, Chiye; Zhang, Chi; Wang, Lihong VPhysical review letters2014 Jan 101430224483902
Spin models inferred from patient-derived viral sequence data faithfully describe HIV fitness landscapes.Shekhar, Karthik; Ruberman, Claire F; Ferguson, Andrew L; Barton, John P; Kardar, Mehran; Chakraborty, Arup KPhysical review. E, Statistical, nonlinear, and soft matter physics.2013 Dec;6270524483484
Long term stability of nanowire nanoelectronics in physiological environments.Zhou, Wei; Dai, Xiaochuan; Fu, Tian-Ming; Xie, Chong; Liu, Jia; Lieber, Charles MNano letters2014 Mar 121614-924479700
Nonlinear light-sheet fluorescence microscopy by photobleaching imprinting.Gao, Liang; Zhu, Liren; Li, Chiye; Wang, Lihong VJournal of the Royal Society, Interface / the Royal Society2014 Apr 62013085124478278
Photoacoustic measurement of the Gruneisen parameter of tissue.Yao, Da-Kang; Zhang, Chi; Maslov, Konstantin; Wang, Lihong VJournal of biomedical optics2014 Jan1700724474512
Ultrasonically encoded wavefront shaping for focusing into random media.Tay, Jian Wei; Lai, Puxiang; Suzuki, Yuta; Wang, Lihong VScientific reports2014391824472822
Emerging applications of phase-change materials (PCMs): teaching an old dog new tricks.Hyun, Dong Choon; Levinson, Nathanael S; Jeong, Unyong; Xia, YounanAngewandte Chemie (International ed. in English)2014 Apr 73780-9524470287
Ferromagnetic nanoparticles with peroxidase-like activity enhance the cleavage of biological macromolecules for biofilm elimination.Gao, Lizeng; Giglio, Krista M; Nelson, Jacquelyn L; Sondermann, Holger; Travis, Alexander JNanoscale2014 Mar 72588-9324468900
fMRI of retina-originated phosphenes experienced by patients with leber congenital amaurosis.Ashtari, Manzar; Cyckowski, Laura; Yazdi, Alborz; Viands, Amanda; Marshall, Kathleen; Bokkon, Istvan; Maguire, Albert; Bennett, JeanPloS one2014e8606824465873
Cell-penetrating peptide-mediated delivery of TALEN proteins via bioconjugation for genome engineering.Liu, Jia; Gaj, Thomas; Patterson, James T; Sirk, Shannon J; Barbas 3rd, Carlos FPloS one2014e8575524465685
Composition and function of T cell subpopulations are slow to change despite effective antiretroviral treatment of HIV disease.Emu, Brinda; Moretto, Walter J; Hoh, Rebecca; Krone, Melissa; Martin, Jeffrey N; Nixon, Douglas F; Deeks, Steven G; McCune, Joseph MPloS one2014e8561324465619
Focused fluorescence excitation with time-reversed ultrasonically encoded light and imaging in thick scattering media.Lai, Puxiang; Suzuki, Yuta; Xu, Xiao; Wang, Lihong VLaser physics letters20137560424465244
A Distributed Platform for Global-Scale Agent-Based Models of Disease Transmission.Parker, Jon; Epstein, Joshua MACM transactions on modeling and computer simulation : a publication of the Association for Computing Machinery2011 Dec224465120
Improving CRISPR-Cas nuclease specificity using truncated guide RNAs.Fu, Yanfang; Sander, Jeffry D; Reyon, Deepak; Cascio, Vincent M; Joung, J KeithNature biotechnology2014 Jan 26NULL24463574
Neonatal insulin action impairs hypothalamic neurocircuit formation in response to maternal high-fat feeding.Vogt, Merly C; Paeger, Lars; Hess, Simon; Steculorum, Sophie M; Awazawa, Motoharu; Hampel, Brigitte; Neupert, Susanne; Nicholls, Hayley T; Mauer, Jan; Hausen, A Christine; Predel, Reinhard; Kloppenburg, Peter; Horvath, Tamas L; Bruning, Jens CCell2014 Jan 30495-50924462248
Neural Dynamics of Reaching following Incorrect or Absent Motor Preparation.Ames, K Cora; Ryu, Stephen I; Shenoy, Krishna VNeuron2014 Jan 22438-5124462104
Modeling the dynamical effects of anesthesia on brain circuits.Ching, Shinung; Brown, Emery NCurrent opinion in neurobiology2014 Apr116-2224457211
Expanding the zinc-finger recombinase repertoire: directed evolution and mutational analysis of serine recombinase specificity determinants.Sirk, Shannon J; Gaj, Thomas; Jonsson, Andreas; Mercer, Andrew C; Barbas 3rd, Carlos FNucleic acids research2014 Apr 14755-6624452803
Chronic Spinal Cord Electrical Stimulation Protects Against 6-hydroxydopamine Lesions.Yadav, Amol P; Fuentes, Romulo; Zhang, Hao; Vinholo, Thais; Wang, Chi-Han; Freire, Marco Aurelio M; Nicolelis, Miguel A LScientific reports2014383924452435
Analysis of maternal microchimerism in rhesus monkeys (Macaca mulatta) using real-time quantitative PCR amplification of MHC polymorphisms.Bakkour, Sonia; Baker, Chris A R; Tarantal, Alice F; Wen, Li; Busch, Michael P; Lee, Tzong-Hae; McCune, Joseph MChimerism2014 Jan-Mar4180524451553
Diversity of human tRNA genes from the 1000-genomes project.Parisien, Marc; Wang, Xiaoyun; Pan, TaoRNA biology2013 Dec 11853-6724448271
Neurite outgrowth on electrospun nanofibers with uniaxial alignment: the effects of fiber density, surface coating, and supporting substrate.Xie, Jingwei; Liu, Wenying; MacEwan, Matthew R; Bridgman, Paul C; Xia, YounanACS nano2014 Feb 251878-8524444076
Fabrication of Cell Patches Using Biodegradable Scaffolds with a Hexagonal Array of Interconnected Pores (SHAIPs).Zhang, Yu Shrike; Yao, Junjie; Wang, Lihong V; Xia, YounanPolymer2014 Jan 14445-45224443593
A blanket of inhibition: functional inferences from dense inhibitory connectivity.Karnani, Mahesh M; Agetsuma, Masakazu; Yuste, RafaelCurrent opinion in neurobiology.2014 Jun;96-10224440415
Distinct structural features of TFAM drive mitochondrial DNA packaging versus transcriptional activation.Ngo, Huu B; Lovely, Geoffrey A; Phillips, Rob; Chan, David CNature communications2014307724435062
Comparing protein folding in vitro and in vivo: foldability meets the fitness challenge.Hingorani, Karan S; Gierasch, Lila MCurrent opinion in structural biology2014 Jan 1381-9024434632
PIWI proteins and PIWI-interacting RNAs in the soma.Ross, Robert J; Weiner, Molly M; Lin, HaifanNature2014 Jan 16353-924429634
Grafting aptamers onto gold nanostars increases in vitro efficacy in a wide range of cancer cell types.Dam, Duncan Hieu M; Culver, Kayla S B; Odom, Teri WMolecular pharmaceutics2014 Feb 3580-724422969
Transcriptome in vivo analysis (TIVA) of spatially defined single cells in live tissue.Lovatt, Ditte; Ruble, Brittani K; Lee, Jaehee; Dueck, Hannah; Kim, Tae Kyung; Fisher, Stephen; Francis, Chantal; Spaethling, Jennifer M; Wolf, John A; Grady, M Sean; Ulyanova, Alexandra V; Yeldell, Sean B; Griepenburg, Julianne C; Buckley, Peter T; Kim, JNature methods2014 Feb190-624412976
Noninvasive prenatal diagnosis in a fetus at risk for methylmalonic acidemia.Gu, Wei; Koh, Winston; Blumenfeld, Yair J; El-Sayed, Yasser Y; Hudgins, Louanne; Hintz, Susan R; Quake, Stephen RGenetics in medicine : official journal of the American College of Medical Genetics2014 Jan 9NULL24406457
Electrical Stimulation of the Ventral Tegmental Area Induces Reanimation from General Anesthesia.Solt, Ken; Van Dort, Christa J; Chemali, Jessica J; Taylor, Norman E; Kenny, Jonathan D; Brown, Emery NAnesthesiology2014 Jan 6NULL24398816
Label-free photoacoustic microscopy of peripheral nerves.Matthews, Thomas Paul; Zhang, Chi; Yao, Da-Kang; Maslov, Konstantin; Wang, Lihong VJournal of biomedical optics2014 Jan1600424395587
Retrospective respiration-gated whole-body photoacoustic computed tomography of mice.Xia, Jun; Chen, Wanyi; Maslov, Konstantin; Anastasio, Mark A; Wang, Lihong VJournal of biomedical optics2014 Jan1600324395586
Higher CD27+CD8+ T cells percentages during suppressive antiretroviral therapy predict greater subsequent CD4+ T cell recovery in treated HIV infection.Seu, Lillian; Ortiz, Gabriel M; Epling, Lorrie; Sinclair, Elizabeth; Swainson, Louise A; Bajpai, Urmila D; Huang, Yong; Deeks, Steven G; Hunt, Peter W; Martin, Jeffrey N; McCune, Joseph MPloS one2013e8409124391889
Using a kinase-inducible bimolecular switch to control enzyme activity in living cells.Mehta, Sohum; Zhang, JinCurrent protocols in chemical biology2013 Oct 1227-3724391085
Intranasal epidermal growth factor treatment rescues neonatal brain injury.Scafidi, Joseph; Hammond, Timothy R; Scafidi, Susanna; Ritter, Jonathan; Jablonska, Beata; Roncal, Maria; Szigeti-Buck, Klara; Coman, Daniel; Huang, Yuegao; McCarter Jr, Robert J; Hyder, Fahmeed; Horvath, Tamas L; Gallo, VittorioNature2014 Feb 13230-424390343
Flies and humans share a motion estimation strategy that exploits natural scene statistics.Clark, Damon A; Fitzgerald, James E; Ales, Justin M; Gohl, Daryl M; Silies, Marion A; Norcia, Anthony M; Clandinin, Thomas RNature neuroscience2014 Feb296-30324390225
Is there consistency and specificity of autonomic changes during emotional episodes? Guidance from the Conceptual Act Theory and psychophysiology.Quigley, Karen S; Barrett, Lisa FeldmanBiological psychology2014 Jan 2NULL24388802
Germline progenitors escape the widespread phenomenon of homolog pairing during Drosophila development.Joyce, Eric F; Apostolopoulos, Nicholas; Beliveau, Brian J; Wu, C-tingPLoS genetics2013e100401324385920
Comprehensive proteomic profiling of outer membrane vesicles from Campylobacter jejuni.Jang, Kyoung-Soon; Sweredoski, Michael J; Graham, Robert L J; Hess, Sonja; Clemons Jr, William MJournal of proteomics2014 Feb 2690-824382552
Advances in modeling ventricular arrhythmias: from mechanisms to the clinic.Trayanova, Natalia A; Boyle, Patrick MWiley interdisciplinary reviews. Systems biology and medicine.2014 Mar-Apr;209-2424375958
Large-scale mapping of transposable element insertion sites using digital encoding of sample identity.Gohl, Daryl M; Freifeld, Limor; Silies, Marion; Hwa, Jennifer J; Horowitz, Mark; Clandinin, Thomas RGenetics2014 Mar615-2324374352
FuseFISH: robust detection of transcribed gene fusions in single cells.Semrau, Stefan; Crosetto, Nicola; Bienko, Magda; Boni, Marina; Bernasconi, Paolo; Chiarle, Roberto; van Oudenaarden, AlexanderCell reports2014 Jan 1618-2324373969
High-resolution photoacoustic tomography of resting-state functional connectivity in the mouse brain.Nasiriavanaki, Mohammadreza; Xia, Jun; Wan, Hanlin; Bauer, Adam Quentin; Culver, Joseph P; Wang, Lihong VProceedings of the National Academy of Sciences of the United States of America.2014 Jan 07;24367107
Incorporation of flexible objectives and time-linked simulation with flux balance analysis.Birch, Elsa W; Udell, Madeleine; Covert, Markus WJournal of theoretical biology2014 Mar 2121-Dec24361328
Interactome maps of mouse gene regulatory domains reveal basic principles of transcriptional regulation.Kieffer-Kwon, Kyong-Rim; Tang, Zhonghui; Mathe, Ewy; Qian, Jason; Sung, Myong-Hee; Li, Guoliang; Resch, Wolfgang; Baek, Songjoon; Pruett, Nathanael; Grontved, Lars; Vian, Laura; Nelson, Steevenson; Zare, Hossein; Hakim, Ofir; Reyon, Deepak; Yamane, Arito;Cell2013 Dec 191507-2024360274
National and local influenza surveillance through Twitter: an analysis of the 2012-2013 influenza epidemic.Broniatowski, David A; Paul, Michael J; Dredze, MarkPloS one2013e8367224349542
Caveolin-3 regulates compartmentation of cardiomyocyte beta2-adrenergic receptor-mediated cAMP signaling.Wright, Peter T; Nikolaev, Viacheslav O; O'Hara, Thomas; Diakonov, Ivan; Bhargava, Anamika; Tokar, Sergiy; Schobesberger, Sophie; Shevchuk, Andrew I; Sikkel, Markus B; Wilkinson, Ross; Trayanova, Natalia A; Lyon, Alexander R; Harding, Sian E; Gorelik, JuliaJournal of molecular and cellular cardiology.2014 Feb;38-4824345421
Virtual 3D heart models to aid pacemaker implantation in children.Trayanova, Natalia AFuture cardiology.2014 Jan;8-May24344653
Trends in antibiotic resistance in coagulase-negative staphylococci in the United States, 1999 to 2012.May, Larissa; Klein, Eili Y; Rothman, Richard E; Laxminarayan, RamananAntimicrobial agents and chemotherapy2014 Mar1404-924342646
Genome-scale CRISPR-Cas9 knockout screening in human cells.Shalem, Ophir; Sanjana, Neville E; Hartenian, Ella; Shi, Xi; Scott, David A; Mikkelsen, Tarjei S; Heckl, Dirk; Ebert, Benjamin L; Root, David E; Doench, John G; Zhang, FengScience (New York, N.Y.)2014 Jan 384-724336571
Free-standing kinked nanowire transistor probes for targeted intracellular recording in three dimensions.Qing, Quan; Jiang, Zhe; Xu, Lin; Gao, Ruixuan; Mai, Liqiang; Lieber, Charles MNature nanotechnology2013 Dec 15NULL24336402
Mycobacteria manipulate macrophage recruitment through coordinated use of membrane lipids.Cambier, C J; Takaki, Kevin K; Larson, Ryan P; Hernandez, Rafael E; Tobin, David M; Urdahl, Kevin B; Cosma, Christine L; Ramakrishnan, LalitaNature2014 Jan 9218-2224336213
Using well-defined Ag nanocubes as substrates to quantify the spatial resolution and penetration depth of surface-enhanced Raman scattering imaging.Moran, Christine H; Rycenga, Matthew; Xia, Xiaohu; Cobley, Claire M; Xia, YounanNanotechnology2014 Jan 101400724334508
Nasal Microenvironments and Interspecific Interactions Influence Nasal Microbiota Complexity and S.ýýaureus Carriage.Yan, Miling; Pamp, Sunje J; Fukuyama, Julia; Hwang, Peter H; Cho, Do-Yeon; Holmes, Susan; Relman, David ACell host & microbe2013 Dec 11631-4024331461
Wide-field two-dimensional multifocal optical-resolution photoacoustic-computed microscopy.Xia, Jun; Li, Guo; Wang, Lidai; Nasiriavanaki, Mohammadreza; Maslov, Konstantin; Engelbach, John A; Garbow, Joel R; Wang, Lihong VOptics letters2013 Dec 155236-924322226
Absolute photoacoustic thermometry in deep tissue.Yao, Junjie; Ke, Haixin; Tai, Stephen; Zhou, Yong; Wang, Lihong VOptics letters2013 Dec 155228-3124322224
Photobleaching imprinting microscopy: seeing clearer and deeper.Gao, Liang; Garcia-Uribe, Alejandro; Liu, Yan; Li, Chiye; Wang, Lihong VJournal of cell science.2014 Jan 15;24317295
Structural basis for enhanced HIV-1 neutralization by a dimeric immunoglobulin G form of the glycan-recognizing antibody 2G12.Wu, Yunji; West Jr, Anthony P; Kim, Helen J; Thornton, Matthew E; Ward, Andrew B; Bjorkman, Pamela JCell reports2013 Dec 121443-5524316082
Adipose Tissue Macrophages: Amicus adipem?Odegaard, Justin I; Ganeshan, Kirthana; Chawla, AjayCell metabolism2013 Dec 3767-824315364
Males shorten the life span of C. elegans hermaphrodites via secreted compounds.Maures, Travis J; Booth, Lauren N; Benayoun, Berenice A; Izrayelit, Yevgeniy; Schroeder, Frank C; Brunet, AnneScience (New York, N.Y.)2014 Jan 31541-424292626
Ultrasonically encoded photoacoustic flowgraphy in biological tissue.Wang, Lidai; Xia, Jun; Yao, Junjie; Maslov, Konstantin I; Wang, Lihong VPhysical review letters2013 Nov 1520430124289689
Improving limited-view photoacoustic tomography with an acoustic reflector.Huang, Bin; Xia, Jun; Maslov, Konstantin; Wang, Lihong VJournal of biomedical optics201311050524285421
Simulating the evolution of the human family: cooperative breeding increases in harsh environments.Smaldino, Paul E; Newson, Lesley; Schank, Jeffrey C; Richerson, Peter JPloS one2013e8075324278318
Cooperation in Harsh Environments and the Emergence of Spatial Patterns.Smaldino, Paul EChaos, solitons, and fractals2013 NovNULL24277977
Optical sectioning by wide-field photobleaching imprinting microscopy.Li, Chiye; Gao, Liang; Liu, Yan; Wang, Lihong VApplied physics letters.2013 Oct 28;18370324273331
High-resolution mapping reveals a conserved, widespread, dynamic mRNA methylation program in yeast meiosis.Schwartz, Schraga; Agarwala, Sudeep D; Mumbach, Maxwell R; Jovanovic, Marko; Mertins, Philipp; Shishkin, Alexander; Tabach, Yuval; Mikkelsen, Tarjei S; Satija, Rahul; Ruvkun, Gary; Carr, Steven A; Lander, Eric S; Fink, Gerald R; Regev, AvivCell2013 Dec 51409-2124269006
Temporal response of the human virome to immunosuppression and antiviral therapy.De Vlaminck, Iwijn; Khush, Kiran K; Strehl, Calvin; Kohli, Bitika; Luikart, Helen; Neff, Norma F; Okamoto, Jennifer; Snyder, Thomas M; Cornfield, David N; Nicolls, Mark R; Weill, David; Bernstein, Daniel; Valantine, Hannah A; Quake, Stephen RCell2013 Nov 211178-8724267896
Statistical approach to protein quantification.Gerster, Sarah; Kwon, Taejoon; Ludwig, Christina; Matondo, Mariette; Vogel, Christine; Marcotte, Edward M; Aebersold, Ruedi; Buhlmann, PeterMolecular & cellular proteomics : MCP2014 Feb666-7724255132
Regulation of Endogenous Human Gene Expression by Ligand-Inducible TALE Transcription Factors.Mercer, Andrew C; Gaj, Thomas; Sirk, Shannon J; Lamb, Brian M; Barbas 3rd, Carlos FACS synthetic biology2013 Nov 22NULL24251925
CD4 CTL: Living up to the challenge.Cheroutre, Hilde; Husain, Mohammad MushtaqSeminars in immunology2013 Nov 15273-8124246226
Delicate Balance between Functionally Required Flexibility and Aggregation Risk in a *-Rich Protein.Ferrolino, Mylene C; Zhuravleva, Anastasia; Budyak, Ivan L; Krishnan, Beena; Gierasch, Lila MBiochemistry2013 Nov 25NULL24236614
DNA sequence-dependent mechanics and protein-assisted bending in repressor-mediated loop formation.Boedicker, James Q; Garcia, Hernan G; Johnson, Stephanie; Phillips, RobPhysical biology2013 Dec6600524231252
PhosphoNetworks: a database for human phosphorylation networks.Hu, Jianfei; Rho, Hee-Sool; Newman, Robert H; Zhang, Jin; Zhu, Heng; Qian, JiangBioinformatics (Oxford, England)2014 Jan 1141-224227675
Themis sets the signal threshold for positive and negative selection in T-cell development.Fu, Guo; Casas, Javier; Rigaud, Stephanie; Rybakin, Vasily; Lambolez, Florence; Brzostek, Joanna; Hoerter, John A H; Paster, Wolfgang; Acuto, Oreste; Cheroutre, Hilde; Sauer, Karsten; Gascoigne, Nicholas R JNature2013 Dec 19441-524226767
The histone demethylase LSD1/KDM1A promotes the DNA damage response.Mosammaparast, Nima; Kim, Haeyoung; Laurent, Benoit; Zhao, Yu; Lim, Hui Jun; Majid, Mona C; Dango, Sebastian; Luo, Yuying; Hempel, Kristina; Sowa, Mathew E; Gygi, Steven P; Steen, Hanno; Harper, J Wade; Yankner, Bruce; Shi, YangThe Journal of cell biology2013 Nov 11457-7024217620
DataHigh: graphical user interface for visualizing and interacting with high-dimensional neural activity.Cowley, Benjamin R; Kaufman, Matthew T; Butler, Zachary S; Churchland, Mark M; Ryu, Stephen I; Shenoy, Krishna V; Yu, Byron MJournal of neural engineering2013 Dec6601224216250
Feedback control of gene expression variability in the Caenorhabditis elegans Wnt pathway.Ji, Ni; Middelkoop, Teije C; Mentink, Remco A; Betist, Marco C; Tonegawa, Satto; Mooijman, Dylan; Korswagen, Hendrik C; van Oudenaarden, AlexanderCell2013 Nov 7869-8024209624
Likelihood methods for point processes with refractoriness.Citi, Luca; Ba, Demba; Brown, Emery N; Barbieri, RiccardoNeural computation2014 Feb237-6324206384
A brain-machine interface for control of medically-induced coma.Shanechi, Maryam M; Chemali, Jessica J; Liberman, Max; Solt, Ken; Brown, Emery NPLoS computational biology2013 Octe100328424204231
Context-dependent computation by recurrent dynamics in prefrontal cortex.Mante, Valerio; Sussillo, David; Shenoy, Krishna V; Newsome, William TNature2013 Nov 778-8424201281
Increased robustness of single-molecule counting with microfluidics, digital isothermal amplification, and a mobile phone versus real-time kinetic measurements.Selck, David A; Karymov, Mikhail A; Sun, Bing; Ismagilov, Rustem FAnalytical chemistry2013 Nov 1911129-3624199852
Imaging neuronal populations in behaving rodents: paradigms for studying neural circuits underlying behavior in the mammalian cortex.Chen, Jerry L; Andermann, Mark L; Keck, Tara; Xu, Ning-Long; Ziv, YanivThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Nov 617631-4024198355
A brain-machine interface enables bimanual arm movements in monkeys.Ifft, Peter J; Shokur, Solaiman; Li, Zheng; Lebedev, Mikhail A; Nicolelis, Miguel A LScience translational medicine2013 Nov 6210ra15424197735
Ultrasound-heated photoacoustic flowmetry.Wang, Lidai; Yao, Junjie; Maslov, Konstantin I; Xing, Wenxin; Wang, Lihong VJournal of biomedical optics201311700324194064
Time-reversed ultrasonically encoded optical focusing using two ultrasonic transducers for improved ultrasonic axial resolution.Yang, Qiang; Xu, Xiao; Lai, Puxiang; Xu, Daxiong; Wang, Lihong VJournal of biomedical optics201311050224194060
Serotonergic neuron regulation informed by in vivo single-cell transcriptomics.Spaethling, Jennifer M; Piel, David; Dueck, Hannah; Buckley, Peter T; Morris, Jacqueline F; Fisher, Stephen A; Lee, Jaehee; Sul, Jai-Yoon; Kim, Junhyong; Bartfai, Tamas; Beck, Sheryl G; Eberwine, James HFASEB journal : official publication of the Federation of American Societies for Experimental Biology2014 Feb771-8024192459
Cytoplasmic intron retention, function, splicing, and the sentinel RNA hypothesis.Buckley, Peter T; Khaladkar, Mugdha; Kim, Junhyong; Eberwine, JamesWiley interdisciplinary reviews. RNA.2014 Mar-Apr;223-3024190870
Silver nanocube on gold microplate as a well-defined and highly active substrate for SERS detection.Xia, Xiaohu; Rycenga, Matthew; Qin, Dong; Xia, YounanJournal of materials chemistry. C, Materials for optical and electronic devices2013 Oct 14NULL24187611
Physical principles for scalable neural recording.Marblestone, Adam H; Zamft, Bradley M; Maguire, Yael G; Shapiro, Mikhail G; Cybulski, Thaddeus R; Glaser, Joshua I; Amodei, Dario; Stranges, P Benjamin; Kalhor, Reza; Dalrymple, David A; Seo, Dongjin; Alon, Elad; Maharbiz, Michel M; Carmena, Jose M; Rabaey, Jan M; Boyden, Edward S; Church, George M; Kording, Konrad PFrontiers in computational neuroscience.2013;24187539
Accelerated discovery via a whole-cell model.Sanghvi, Jayodita C; Regot, Sergi; Carrasco, Silvia; Karr, Jonathan R; Gutschow, Miriam V; Bolival Jr, Benjamin; Covert, Markus WNature methods2013 Dec1192-524185838
PIWI proteins are essential for early Drosophila embryogenesis.Mani, Sneha Ramesh; Megosh, Heather; Lin, HaifanDevelopmental biology2013 Oct 31NULL24184635
PIWI proteins are essential for early Drosophila embryogenesis.Mani, Sneha Ramesh; Megosh, Heather; Lin, HaifanDevelopmental biology2014 Jan 15340-924184635
Aggregate-prone R120GCRYAB triggers multifaceted modifications of the thioredoxin system.Banerjee Mustafi, Soumyajit; Grose, Julianne H; Zhang, Huali; Pratt, Gregory W; Sadoshima, Junichi; Christians, Elisabeth S; Benjamin, Ivor JAntioxidants & redox signaling2014 Jun 202891-90624180415
Chromatin immunoprecipitation assay of Piwi in Drosophila.Yin, Hang; Lin, HaifanMethods in molecular biology (Clifton, N.J.)20144165024178552
Highly expressed loci are vulnerable to misleading ChIP localization of multiple unrelated proteins.Teytelman, Leonid; Thurtle, Deborah M; Rine, Jasper; van Oudenaarden, AlexanderProceedings of the National Academy of Sciences of the United States of America2013 Nov 1218602-724173036
Microbiome assembly across multiple body sites in low-birthweight infants.Costello, Elizabeth K; Carlisle, Erica M; Bik, Elisabeth M; Morowitz, Michael J; Relman, David AmBio2013e00782-1324169577
A cytochrome P450 serves as an unexpected terpene cyclase during fungal meroterpenoid biosynthesis.Chooi, Yit-Heng; Hong, Young J; Cacho, Ralph A; Tantillo, Dean J; Tang, YiJournal of the American Chemical Society2013 Nov 1316805-824161266
Semiconductor-based DNA sequencing of histone modification states.Cheng, Christine S; Rai, Kunal; Garber, Manuel; Hollinger, Andrew; Robbins, Dana; Anderson, Scott; Macbeth, Alyssa; Tzou, Austin; Carneiro, Mauricio O; Raychowdhury, Raktima; Russ, Carsten; Hacohen, Nir; Gershenwald, Jeffrey E; Lennon, Niall; Nusbaum, ChaNature communications2013267224157732
Genome engineering using the CRISPR-Cas9 system.Ran, F Ann; Hsu, Patrick D; Wright, Jason; Agarwala, Vineeta; Scott, David A; Zhang, FengNature protocols2013 Nov2281-30824157548
Discovery of a potent inhibitor of replication protein a protein-protein interactions using a fragment-linking approach.Frank, Andreas O; Feldkamp, Michael D; Kennedy, J Phillip; Waterson, Alex G; Pelz, Nicholas F; Patrone, James D; Vangamudi, Bhavatarini; Camper, DeMarco V; Rossanese, Olivia W; Chazin, Walter J; Fesik, Stephen WJournal of medicinal chemistry2013 Nov 279242-5024147804
Poly(dA:dT)-rich DNAs are highly flexible in the context of DNA looping.Johnson, Stephanie; Chen, Yi-Ju; Phillips, RobPloS one2013e7579924146776
Antigen-specific B-cell receptor sensitizes B cells to infection by influenza virus.Dougan, Stephanie K; Ashour, Joseph; Karssemeijer, Roos A; Popp, Maximilian W; Avalos, Ana M; Barisa, Marta; Altenburg, Arwen F; Ingram, Jessica R; Cragnolini, Juan Jose; Guo, Chunguang; Alt, Frederick W; Jaenisch, Rudolf; Ploegh, Hidde LNature2013 Nov 21406-924141948
The challenge of connecting the dots in the B.R.A.I.N.Devor, Anna; Bandettini, Peter A; Boas, David A; Bower, James M; Buxton, Richard B; Cohen, Lawrence B; Dale, Anders M; Einevoll, Gaute T; Fox, Peter T; Franceschini, Maria Angela; Friston, Karl J; Fujimoto, James G; Geyer, Mark A; Greenberg, Joel H; Halgren, Eric; Hamalainen, Matti S; Helmchen, Fritjof; Hyman, Bradley T; Jasanoff, Alan; Jernigan, Terry L; Judd, Lewis L; Kim, Seong-Gi; Kleinfeld, David; Kopell, Nancy J; Kutas, Marta; Kwong, Kenneth K; Larkum, Matthew E; Lo, Eng H; Magistretti, Pierre J; Mandeville, Joseph B; Masliah, Eliezer; Mitra, Partha P; Mobley, William C; Moskowitz, Michael A; Nimmerjahn, Axel; Reynolds, John H; Rosen, Bruce R; Salzberg, Brian M; Schaffer, Chris B; Silva, Gabriel A; So, Peter T C; Spitzer, Nicholas C; Tootell, Roger B; Van Essen, David C; Vanduffel, Wim; Vinogradov, Sergei A; Wald, Lawrence L; Wang, Lihong V; Weber, Bruno; Yodh, Arjun GNeuron.2013 Oct 16;270-424139032
Correction: Distal Effect of Amino Acid Substitutions in CYP2C9 Polymorphic Variants Causes Differences in Interatomic Interactions against (S)-Warfarin.Lertkiatmongkol, Panida; Assawamakin, Anunchai; White, George; Chopra, Gaurav; Rongnoparut, Pornpimol; Samudrala, Ram; Tongsima, SissadesPloS one2013NULL24137505
Three-dimensional mapping of microcircuit correlation structure.Cotton, R James; Froudarakis, Emmanouil; Storer, Patrick; Saggau, Peter; Tolias, Andreas SFrontiers in neural circuits201315124133414
Atrophy in distinct corticolimbic networks in frontotemporal dementia relates to social impairments measured using the Social Impairment Rating Scale.Bickart, Kevin C; Brickhouse, Michael; Negreira, Alyson; Sapolsky, Daisy; Barrett, Lisa Feldman; Dickerson, Bradford CJournal of neurology, neurosurgery, and psychiatry2014 Apr438-4824133285
SHANK3 and IGF1 restore synaptic deficits in neurons from 22q13 deletion syndrome patients.Shcheglovitov, Aleksandr; Shcheglovitova, Olesya; Yazawa, Masayuki; Portmann, Thomas; Shu, Rui; Sebastiano, Vittorio; Krawisz, Anna; Froehlich, Wendy; Bernstein, Jonathan A; Hallmayer, Joachim F; Dolmetsch, Ricardo ENature2013 Nov 14267-7124132240
Non-Invasive and In Situ Characterization of the Degradation of Biomaterial Scaffolds by Volumetric Photoacoustic Microscopy.Zhang, Yu Shrike; Cai, Xin; Yao, Junjie; Xing, Wenxin; Wang, Lihong V; Xia, YounanAngewandte Chemie (International ed. in English)2013 Oct 15NULL24130155
Cross-reactive immune responses as primary drivers of malaria chronicity.Klein, Eili Y; Graham, Andrea L; Llinas, Manuel; Levin, SimonInfection and immunity2014 Jan140-5124126530
Rapid, stable, chemoselective labeling of thiols with Julia-Kocienski-like reagents: a serum-stable alternative to maleimide-based protein conjugation.Toda, Narihiro; Asano, Shigehiro; Barbas 3rd, Carlos FAngewandte Chemie (International ed. in English)2013 Nov 2512592-624123851
AMPA receptor antagonist NBQX attenuates later-life epileptic seizures and autistic-like social deficits following neonatal seizures.Lippman-Bell, Jocelyn J; Rakhade, Sanjay N; Klein, Peter M; Obeid, Makram; Jackson, Michele C; Joseph, Annelise; Jensen, Frances EEpilepsia2013 Nov1922-3224117347
The fumagillin gene cluster, an example of hundreds of genes under veA control in Aspergillus fumigatus.Dhingra, Sourabh; Lind, Abigail L; Lin, Hsiao-Ching; Tang, Yi; Rokas, Antonis; Calvo, Ana MPloS one2013e7714724116213
Real-time segmentation and tracking of brain metabolic state in ICU EEG recordings of burst suppression.Westover, M Brandon; Ching, ShiNung; Shafi, Mouhsin M; Cash, Sydney S; Brown, Emery NConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20137108-1124111383
Reference-free harmonic regression technique to remove EEG-fMRI ballistocardiogram artifacts.Krishnaswamy, Pavitra; Bonmassar, Giorgio; Purdon, Patrick L; Brown, Emery NConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference20135426-924110963
Investigating the role of firing-rate normalization and dimensionality reduction in brain-machine interface robustness.Kao, Jonathan C; Nuyujukian, Paul; Stavisky, Sergey; Ryu, Stephen I; Ganguli, Surya; Shenoy, Krishna VConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference2013293-824109682
Small-animal whole-body photoacoustic tomography: a review.Xia, Jun; Wang, LihongIEEE transactions on bio-medical engineering2013 Sep 25NULL24108456
Targeted DNA demethylation and activation of endogenous genes using programmable TALE-TET1 fusion proteins.Maeder, Morgan L; Angstman, James F; Richardson, Marcy E; Linder, Samantha J; Cascio, Vincent M; Tsai, Shengdar Q; Ho, Quan H; Sander, Jeffry D; Reyon, Deepak; Bernstein, Bradley E; Costello, Joseph F; Wilkinson, Miles F; Joung, J KeithNature biotechnology2013 Dec1137-4224108092
Visualization of synaptic inhibition with an optogenetic sensor developed by cell-free protein engineering automation.Grimley, Joshua S; Li, Li; Wang, Weina; Wen, Lei; Beese, Lorena S; Hellinga, Homme W; Augustine, George JThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Oct 916297-30924107961
Inconvenient truths in the pursuit of scientific knowledge and public health.Relman, David AThe Journal of infectious diseases2014 Jan 15170-224106297
Enhancement of photoacoustic tomography by ultrasonic computed tomography based on optical excitation of elements of a full-ring transducer array.Xia, Jun; Huang, Chao; Maslov, Konstantin; Anastasio, Mark A; Wang, Lihong VOptics letters2013 Aug 153140-324104670
All-optical osteotomy to create windows for transcranial imaging in mice.Jeong, Diana C; Tsai, Philbert S; Kleinfeld, DavidOptics express.2013 Oct 7;23160-824104230
Imaging energy status in live cells with a fluorescent biosensor of the intracellular ATP-to-ADP ratio.Tantama, Mathew; Martinez-Francois, Juan Ramon; Mongeon, Rebecca; Yellen, GaryNature communications2013255024096541
Photoacoustic recovery after photothermal bleaching in living cells.Li, Chiye; Zhang, Chi; Gao, Liang; Garcia-Uribe, Alejandro; Wang, Lihong VJournal of biomedical optics201310600424089253
Gene Expression Profiling of a Hypoxic Seizure Model of Epilepsy Suggests a Role for mTOR and Wnt Signaling in Epileptogenesis.Theilhaber, Joachim; Rakhade, Sanjay N; Sudhalter, Judy; Kothari, Nayantara; Klein, Peter; Pollard, Jack; Jensen, Frances EPloS one2013e7442824086344
Higher 5-hydroxymethylcytosine identifies immortal DNA strand chromosomes in asymmetrically self-renewing distributed stem cells.Huh, Yang Hoon; Cohen, Justin; Sherley, James LProceedings of the National Academy of Sciences of the United States of America2013 Oct 1516862-724082118
Identification of discrete functional subregions of the human periaqueductal gray.Satpute, Ajay B; Wager, Tor D; Cohen-Adad, Julien; Bianciardi, Marta; Choi, Ji-Kyung; Buhle, Jason T; Wald, Lawrence L; Barrett, Lisa FeldmanProceedings of the National Academy of Sciences of the United States of America2013 Oct 1517101-624082116
Calibration-free in vivo transverse blood flowmetry based on cross correlation of slow time profiles from photoacoustic microscopy.Zhou, Yong; Liang, Jinyang; Maslov, Konstantin I; Wang, Lihong VOptics letters2013 Oct 13882-524081077
The impact of heterogeneous transmission on the establishment and spread of antimalarial drug resistance.Klein, Eili YJournal of theoretical biology2014 Jan 7177-8524076451
Dendritic Glutamate Receptor mRNAs Show Contingent Local Hotspot-Dependent Translational Dynamics.Kim, Tae Kyung; Sul, Jai-Yoon; Helmfors, Henrik; Langel, Ulo; Kim, Junhyong; Eberwine, JamesCell reports2013 Oct 17114-2524075992
Maternal and offspring pools of osteocalcin influence brain development and functions.Oury, Franck; Khrimian, Lori; Denny, Christine A; Gardin, Antoine; Chamouni, Alexandre; Goeden, Nick; Huang, Yung-yu; Lee, Hojoon; Srinivas, Prashanth; Gao, Xiao-Bing; Suyama, Shigetomo; Langer, Thomas; Mann, John J; Horvath, Tamas L; Bonnin, Alexandre; Karsenty, GerardCell.2013 Sep 26;228-4124074871
Mitochondrial dynamics controlled by mitofusins regulate Agrp neuronal activity and diet-induced obesity.Dietrich, Marcelo O; Liu, Zhong-Wu; Horvath, Tamas LCell.2013 Sep 26;188-9924074868
Mitofusin 2 in POMC Neurons Connects ER Stress with Leptin Resistance and Energy Imbalance.Schneeberger, Marc; Dietrich, Marcelo O; Sebastian, David; Imbernon, Monica; Castano, Carlos; Garcia, Ainhoa; Esteban, Yaiza; Gonzalez-Franquesa, Alba; Rodriguez, Ignacio Castrillon; Bortolozzi, Analia; Garcia-Roves, Pablo M; Gomis, Ramon; Nogueiras, RubeCell2013 Sep 26172-8724074867
Nanoelectronics-biology frontier: From nanoscopic probes for action potential recording in live cells to three-dimensional cyborg tissues.Duan, Xiaojie; Fu, Tian-Ming; Liu, Jia; Lieber, Charles MNano today2013 Aug 1351-37324073014
AMP deaminase 3 deficiency enhanced 5'-AMP induction of hypometabolism.Daniels, Isadora Susan; O Brien 3rd, William G; Nath, Vinay; Zhao, Zhaoyang; Lee, Cheng ChiPloS one2013e7541824066180
Structured-illumination photoacoustic Doppler flowmetry of axial flow in homogeneous scattering media.Zhang, Ruiying; Yao, Junjie; Maslov, Konstantin I; Wang, Lihong VApplied physics letters.2013 Aug 26;9410124065864
Blood spotlight on leukocytes and obesity.Carvalheira, Jose Barreto Campello; Qiu, Yifu; Chawla, AjayBlood2013 Nov 73263-724065242
Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota.Kashyap, Purna C; Marcobal, Angela; Ursell, Luke K; Smits, Samuel A; Sonnenburg, Erica D; Costello, Elizabeth K; Higginbottom, Steven K; Domino, Steven E; Holmes, Susan P; Relman, David A; Knight, Rob; Gordon, Jeffrey I; Sonnenburg, Justin LProceedings of the National Academy of Sciences of the United States of America2013 Oct 1517059-6424062455
Chemical analog-to-digital signal conversion based on robust threshold chemistry and its evaluation in the context of microfluidics-based quantitative assays.Huynh, Toan; Sun, Bing; Li, Liang; Nichols, Kevin P; Koyner, Jay L; Ismagilov, Rustem FJournal of the American Chemical Society2013 Oct 214775-8324060606
Live-cell imaging of cytosolic NADH-NAD+ redox state using a genetically encoded fluorescent biosensor.Hung, Yin Pun; Yellen, GaryMethods in molecular biology (Clifton, N.J.).2014;83-9524052382
p53 regulates Period2 expression and the circadian clock.Miki, Takao; Matsumoto, Tomoko; Zhao, Zhaoyang; Lee, Cheng ChiNature communications2013244424051492
Disruption of CEP290 microtubule/membrane-binding domains causes retinal degeneration.Drivas, Theodore G; Holzbaur, Erika L F; Bennett, JeanThe Journal of clinical investigation.2013 Oct;4525-3924051377
Developmental Expression of N-Methyl-D-Aspartate (NMDA) Receptor Subunits in Human White and Gray Matter: Potential Mechanism of Increased Vulnerability in the Immature Brain.Jantzie, Lauren L; Talos, Delia M; Jackson, Michele C; Park, Hyun-Kyung; Graham, Dionne A; Lechpammer, Mirna; Folkerth, Rebecca D; Volpe, Joseph J; Jensen, Frances ECerebral cortex (New York, N.Y. : 1991)2013 Sep 17NULL24046081
Type 2 innate lymphoid cells control eosinophil homeostasis.Nussbaum, Jesse C; Van Dyken, Steven J; von Moltke, Jakob; Cheng, Laurence E; Mohapatra, Alexander; Molofsky, Ari B; Thornton, Emily E; Krummel, Matthew F; Chawla, Ajay; Liang, Hong-Erh; Locksley, Richard MNature2013 Oct 10245-24824037376
Dampening of expression oscillations by synchronous regulation of a microRNA and its target.Kim, Dong Hyun; Grun, Dominic; van Oudenaarden, AlexanderNature genetics2013 Sep 15NULL24036951
25th anniversary article: galvanic replacement: a simple and versatile route to hollow nanostructures with tunable and well-controlled properties.Xia, Xiaohu; Wang, Yi; Ruditskiy, Aleksey; Xia, YounanAdvanced materials (Deerfield Beach, Fla.)2013 Nov 266313-3324027074
Noise-equivalent sensitivity of photoacoustics.Winkler, Amy M; Maslov, Konstantin; Wang, Lihong VJournal of biomedical optics2013 Sep9700324026425
Burst suppression probability algorithms: state-space methods for tracking EEG burst suppression.Chemali, Jessica; Ching, ShiNung; Purdon, Patrick L; Solt, Ken; Brown, Emery NJournal of neural engineering2013 Oct5601724018288
Locus-specific editing of histone modifications at endogenous enhancers.Mendenhall, Eric M; Williamson, Kaylyn E; Reyon, Deepak; Zou, James Y; Ram, Oren; Joung, J Keith; Bernstein, Bradley ENature biotechnology2013 Dec1133-624013198
Immunology of AAV-Mediated Gene Transfer in the Eye.Willett, Keirnan; Bennett, JeanFrontiers in immunology.2013;24009613
Cross-correlation-based transverse flow measurements using optical resolution photoacoustic microscopy with a digital micromirror device.Liang, Jinyang; Zhou, Yong; Maslov, Konstantin I; Wang, Lihong VJournal of biomedical optics2013 Sep9600424002191
Nanoparticle SERS substrates with 3D Raman-active volumes.Stoerzinger, Kelsey A; Lin, Julia Y; Odom, Teri WChemical science (Royal Society of Chemistry : 2010)2011 Aug 11435-143923997929
ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation.Lin, John Y; Knutsen, Per Magne; Muller, Arnaud; Kleinfeld, David; Tsien, Roger YNature neuroscience2013 Oct1499-50823995068
Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity.Ran, F Ann; Hsu, Patrick D; Lin, Chie-Yu; Gootenberg, Jonathan S; Konermann, Silvana; Trevino, Alexandro E; Scott, David A; Inoue, Azusa; Matoba, Shogo; Zhang, Yi; Zhang, FengCell2013 Sep 121380-923992846
Synaptic state matching: a dynamical architecture for predictive internal representation and feature detection.Tavazoie, SaeedPloS one2013e7286523991161
Production of unnaturally linked chimeric proteins using a combination of sortase-catalyzed transpeptidation and click chemistry.Witte, Martin D; Theile, Christopher S; Wu, Tongfei; Guimaraes, Carla P; Blom, Annet E M; Ploegh, Hidde LNature protocols.2013 Sep;1808-1923989675
Adaptive translation as a mechanism of stress response and adaptation.Pan, TaoAnnual review of genetics2013121-3723988117
Expanding the scope of site-specific recombinases for genetic and metabolic engineering.Gaj, Thomas; Sirk, Shannon J; Barbas 3rd, Carlos FBiotechnology and bioengineering2014 Jan4165423982993
Expanding the primate body schema in sensorimotor cortex by virtual touches of an avatar.Shokur, Solaiman; O'Doherty, Joseph E; Winans, Jesse A; Bleuler, Hannes; Lebedev, Mikhail A; Nicolelis, Miguel A LProceedings of the National Academy of Sciences of the United States of America2013 Sep 1015121-623980141
Directed evolution of the TALE N-terminal domain for recognition of all 5' bases.Lamb, Brian M; Mercer, Andrew C; Barbas 3rd, Carlos FNucleic acids research2013 Nov9779-8523980031
Targeted deletion and inversion of tandemly arrayed genes in Arabidopsis thaliana using zinc finger nucleases.Qi, Yiping; Li, Xiaohong; Zhang, Yong; Starker, Colby G; Baltes, Nicholas J; Zhang, Feng; Sander, Jeffry D; Reyon, Deepak; Joung, J Keith; Voytas, Daniel FG3 (Bethesda, Md.)2013 Oct1707-1523979943
Complexity generation in fungal polyketide biosynthesis: a spirocycle-forming P450 in the concise pathway to the antifungal drug griseofulvin.Cacho, Ralph A; Chooi, Yit-Heng; Zhou, Hui; Tang, YiACS chemical biology2013 Oct 182322-3023978092
Optical-resolution photoacoustic microscopy: auscultation of biological systems at the cellular level.Hu, Song; Wang, Lihong VBiophysical journal2013 Aug 20841-723972836
Circadian gene Bmal1 regulates diurnal oscillations of Ly6C(hi) inflammatory monocytes.Nguyen, Khoa D; Fentress, Sarah J; Qiu, Yifu; Yun, Karen; Cox, Jeffery S; Chawla, AjayScience (New York, N.Y.)2013 Sep 271483-823970558
Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein.Feldkamp, Michael D; Frank, Andreas O; Kennedy, J Phillip; Patrone, James D; Vangamudi, Bhavatarini; Waterson, Alex G; Fesik, Stephen W; Chazin, Walter JBiochemistry2013 Sep 176515-2423962067
Microscale polymer bottles corked with a phase-change material for temperature-controlled release.Hyun, Dong Choon; Lu, Ping; Choi, Sang-Il; Jeong, Unyong; Xia, YounanAngewandte Chemie (International ed. in English)2013 Sep 2710468-7123959631
Neuroscience thinks big (and collaboratively).Kandel, Eric R; Markram, Henry; Matthews, Paul M; Yuste, Rafael; Koch, ChristofNature reviews. Neuroscience.2013 Sep;659-6423958663
Salmonella require the fatty acid regulator PPARýý for the establishment of a metabolic environment essential for long-term persistence.Eisele, Nicholas A; Ruby, Thomas; Jacobson, Amanda; Manzanillo, Paolo S; Cox, Jeffery S; Lam, Lilian; Mukundan, Lata; Chawla, Ajay; Monack, Denise MCell host & microbe2013 Aug 14171-8223954156
Nanoelectronics Meets Biology: From New Nanoscale Devices for Live-Cell Recording to 3D Innervated Tissues.Duan, Xiaojie; Lieber, Charles MChemistry, an Asian journal2013 Oct2304-1423946279
In silico abstraction of zinc finger nuclease cleavage profiles reveals an expanded landscape of off-target sites.Sander, Jeffry D; Ramirez, Cherie L; Linder, Samantha J; Pattanayak, Vikram; Shoresh, Noam; Ku, Manching; Foden, Jennifer A; Reyon, Deepak; Bernstein, Bradley E; Liu, David R; Joung, J KeithNucleic acids research2013 Octe18123945932
Phospholipase B is activated in response to sterol removal and stimulates acrosome exocytosis in murine sperm.Asano, Atsushi; Nelson-Harrington, Jacquelyn L; Travis, Alexander JThe Journal of biological chemistry2013 Sep 2728104-1523943622
Optical clearing-aided photoacoustic microscopy with enhanced resolution and imaging depth.Zhou, Yong; Yao, Junjie; Wang, Lihong VOptics letters2013 Jul 152592-523939121
Stochastic cytokine expression induces mixed T helper cell States.Fang, Miaoqing; Xie, Huangming; Dougan, Stephanie K; Ploegh, Hidde; van Oudenaarden, AlexanderPLoS biology2013 Jule100161823935453
Allele-specific detection of single mRNA molecules in situ.Hansen, Clinton H; van Oudenaarden, AlexanderNature methods2013 Aug 11NULL23934076
Efficient preloading of the ventricles by a properly timed atrial contraction underlies stroke work improvement in the acute response to cardiac resynchronization therapy.Hu, Yuxuan; Gurev, Viatcheslav; Constantino, Jason; Trayanova, NataliaHeart rhythm : the official journal of the Heart Rhythm Society.2013 Dec;1800-623928177
RNA Replicon Delivery via Lipid-Complexed PRINT Protein Particles.Xu, Jing; Luft, J Christopher; Yi, Xianwen; Tian, Shaomin; Owens, Gary; Wang, Jin; Johnson, Ashley; Berglund, Peter; Smith, Jonathan; Napier, Mary E; Desimone, Joseph MMolecular pharmaceutics2013 Aug 21NULL23924216
Conceptualizing and experiencing compassion.Condon, Paul; Feldman Barrett, LisaEmotion (Washington, D.C.)2013 Oct817-2123914766
Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A.Patrone, James D; Kennedy, J Phillip; Frank, Andreas O; Feldkamp, Michael D; Vangamudi, Bhavatarini; Pelz, Nicholas F; Rossanese, Olivia W; Waterson, Alex G; Chazin, Walter J; Fesik, Stephen WACS medicinal chemistry letters2013 Jul 11601-60523914285
Spinal projection neurons control turning behaviors in zebrafish.Huang, Kuo-Hua; Ahrens, Misha B; Dunn, Timothy W; Engert, FlorianCurrent biology : CB2013 Aug 191566-7323910662
Epilepsy biomarkers.Engel Jr, Jerome; Pitkanen, Asla; Loeb, Jeffrey A; Dudek, F Edward; Bertram 3rd, Edward H; Cole, Andrew J; Moshe, Solomon L; Wiebe, Samuel; Jensen, Frances E; Mody, Istvan; Nehlig, Astrid; Vezzani, AnnamariaEpilepsia2013 Aug61-923909854
Issues related to symptomatic and disease-modifying treatments affecting cognitive and neuropsychiatric comorbidities of epilepsy.Brooks-Kayal, Amy R; Bath, Kevin G; Berg, Anne T; Galanopoulou, Aristea S; Holmes, Gregory L; Jensen, Frances E; Kanner, Andres M; O'Brien, Terence J; Whittemore, Vicky H; Winawer, Melodie R; Patel, Manisha; Scharfman, Helen EEpilepsia2013 Aug44-6023909853
Issues related to development of antiepileptogenic therapies.Pitkanen, Asla; Nehlig, Astrid; Brooks-Kayal, Amy R; Dudek, F Edward; Friedman, Daniel; Galanopoulou, Aristea S; Jensen, Frances E; Kaminski, Rafal M; Kapur, Jaideep; Klitgaard, Henrik; Loscher, Wolfgang; Mody, Istvan; Schmidt, DieterEpilepsia2013 Aug35-4323909852
Expression of Isl1 during mouse development.Zhuang, Shaowei; Zhang, Qingquan; Zhuang, Tao; Evans, Sylvia M; Liang, Xingqun; Sun, YunfuGene expression patterns : GEP2013 Jul 29407-41223906961
Microbiota's 'little helpers': bacteriophages and antibiotic-associated responses in the gut microbiome.Sun, Christine L; Relman, David AGenome biology.2013;12723906048
Nanometre-scale thermometry in a living cell.Kucsko, G; Maurer, P C; Yao, N Y; Kubo, M; Noh, H J; Lo, P K; Park, H; Lukin, M DNature2013 Aug 154-823903748
Calibration-free quantification of absolute oxygen saturation based on the dynamics of photoacoustic signals.Xia, Jun; Danielli, Amos; Liu, Yan; Wang, Lidai; Maslov, Konstantin; Wang, Lihong VOptics letters2013 Aug 12800-323903146
Random-access optical-resolution photoacoustic microscopy using a digital micromirror device.Liang, Jinyang; Zhou, Yong; Winkler, Amy W; Wang, Lidai; Maslov, Konstantin I; Li, Chiye; Wang, Lihong VOptics letters2013 Aug 12683-623903111
Rapidly-dissolvable microneedle patches via a highly scalable and reproducible soft lithography approach.Moga, Katherine A; Bickford, Lissett R; Geil, Robert D; Dunn, Stuart S; Pandya, Ashish A; Wang, Yapei; Fain, John H; Archuleta, Christine F; O'Neill, Adrian T; Desimone, Joseph MAdvanced materials (Deerfield Beach, Fla.)2013 Sep 255060-623893866
CRISPR RNA-guided activation of endogenous human genes.Maeder, Morgan L; Linder, Samantha J; Cascio, Vincent M; Fu, Yanfang; Ho, Quan H; Joung, J KeithNature methods2013 Oct977-923892898
Real-time segmentation of burst suppression patterns in critical care EEG monitoring.Brandon Westover, M; Shafi, Mouhsin M; Ching, Shinung; Chemali, Jessica J; Purdon, Patrick L; Cash, Sydney S; Brown, Emery NJournal of neuroscience methods2013 Sep 30131-4123891828
Local cortical dynamics of burst suppression in the anaesthetized brain.Lewis, Laura D; Ching, Shinung; Weiner, Veronica S; Peterfreund, Robert A; Eskandar, Emad N; Cash, Sydney S; Brown, Emery N; Purdon, Patrick LBrain : a journal of neurology2013 Sep2727-3723887187
Deep-tissue photoacoustic tomography of Forster resonance energy transfer.Wang, Yu; Xia, Jun; Wang, Lihong VJournal of biomedical optics201310131623884608
Optical control of mammalian endogenous transcription and epigenetic states.Konermann, Silvana; Brigham, Mark D; Trevino, Alexandro E; Hsu, Patrick D; Heidenreich, Matthias; Cong, Le; Platt, Randall J; Scott, David A; Church, George M; Zhang, FengNature2013 Aug 22472-623877069
Heritable and precise zebrafish genome editing using a CRISPR-Cas system.Hwang, Woong Y; Fu, Yanfang; Reyon, Deepak; Maeder, Morgan L; Kaini, Prakriti; Sander, Jeffry D; Joung, J Keith; Peterson, Randall T; Yeh, Jing-Ruey JoannaPloS one2013e6870823874735
An enzyme that inactivates the inflammatory mediator leukotriene b4 restricts mycobacterial infection.Tobin, David M; Roca, Francisco J; Ray, John P; Ko, Dennis C; Ramakrishnan, LalitaPloS one2013e6782823874453
DNA targeting specificity of RNA-guided Cas9 nucleases.Hsu, Patrick D; Scott, David A; Weinstein, Joshua A; Ran, F Ann; Konermann, Silvana; Agarwala, Vineeta; Li, Yinqing; Fine, Eli J; Wu, Xuebing; Shalem, Ophir; Cradick, Thomas J; Marraffini, Luciano A; Bao, Gang; Zhang, FengNature biotechnology2013 Sep827-3223873081
Coordination of heart and lung co-development by a multipotent cardiopulmonary progenitor.Peng, Tien; Tian, Ying; Boogerd, Cornelis J; Lu, Min Min; Kadzik, Rachel S; Stewart, Kathleen M; Evans, Sylvia M; Morrisey, Edward ENature2013 Aug 29589-9223873040
Structure prediction of partial-length protein sequences.Laurenzi, Adrian; Hung, Ling-Hong; Samudrala, RamInternational journal of molecular sciences201314892-90723867606
Heparan sulfate proteoglycans containing a glypican 5 core and 2-O-sulfo-iduronic acid function as Sonic Hedgehog co-receptors to promote proliferation.Witt, Rochelle M; Hecht, Marie-Lyn; Pazyra-Murphy, Maria F; Cohen, Samuel M; Noti, Christian; van Kuppevelt, Toin H; Fuller, Maria; Chan, Jennifer A; Hopwood, John J; Seeberger, Peter H; Segal, Rosalind AThe Journal of biological chemistry2013 Sep 626275-8823867465
A coaxial optrode as multifunction write-read probe for optogenetic studies in non-human primates.Ozden, Ilker; Wang, Jing; Lu, Yao; May, Travis; Lee, Joonhee; Goo, Werapong; O'Shea, Daniel J; Kalanithi, Paul; Diester, Ilka; Diagne, Mohamed; Deisseroth, Karl; Shenoy, Krishna V; Nurmikko, Arto VJournal of neuroscience methods2013 Sep 30142-5423867081
RNA interference knockdown of DNA methyl-transferase 3 affects gene alternative splicing in the honey bee.Li-Byarlay, Hongmei; Li, Yang; Stroud, Hume; Feng, Suhua; Newman, Thomas C; Kaneda, Megan; Hou, Kirk K; Worley, Kim C; Elsik, Christine G; Wickline, Samuel A; Jacobsen, Steven E; Ma, Jian; Robinson, Gene EProceedings of the National Academy of Sciences of the United States of America2013 Jul 3012750-523852726
A neurodegeneration-specific gene-expression signature of acutely isolated microglia from an amyotrophic lateral sclerosis mouse model.Chiu, Isaac M; Morimoto, Emiko T A; Goodarzi, Hani; Liao, Jennifer T; O'Keeffe, Sean; Phatnani, Hemali P; Muratet, Michael; Carroll, Michael C; Levy, Shawn; Tavazoie, Saeed; Myers, Richard M; Maniatis, TomCell reports2013 Jul 25385-40123850290
Modular use of peripheral input channels tunes motion-detecting circuitry.Silies, Marion; Gohl, Daryl M; Fisher, Yvette E; Freifeld, Limor; Clark, Damon A; Clandinin, Thomas RNeuron2013 Jul 10111-2723849199
TB: the Yin and Yang of lipid mediators.Tobin, David M; Ramakrishnan, LalitaCurrent opinion in pharmacology2013 Aug641-523849093
Dysbiosis of the gut microbiota is associated with hiv disease progression and tryptophan catabolism.Vujkovic-Cvijin, Ivan; Dunham, Richard M; Iwai, Shoko; Maher, Michael C; Albright, Rebecca G; Broadhurst, Mara J; Hernandez, Ryan D; Lederman, Michael M; Huang, Yong; Somsouk, Ma; Deeks, Steven G; Hunt, Peter W; Lynch, Susan V; McCune, Joseph MScience translational medicine2013 Jul 10193ra9123843452
Instantaneous three-dimensional sensing using spatial light modulator illumination with extended depth of field imaging.Quirin, Sean; Peterka, Darcy S; Yuste, RafaelOptics express.2013 Jul 1;16007-2123842387
Correction: Evolutionary principles of modular gene regulation in yeasts.Thompson, Dawn A; Roy, Sushmita; Chan, Michelle; Styczynski, Mark P; Pfiffner, Jenna; French, Courtney; Socha, Amanda; Thielke, Anne; Napolitano, Sara; Muller, Paul; Kellis, Manolis; Konieczka, Jay H; Wapinski, Ilan; Regev, AviveLife.2013;e0111423840936
Expanding the structural diversity of polyketides by exploring the cofactor tolerance of an inline methyltransferase domain.Winter, Jaclyn M; Chiou, Grace; Bothwell, Ian R; Xu, Wei; Garg, Neil K; Luo, Minkui; Tang, YiOrganic letters2013 Jul 193774-723837609
SNP ascertainment bias in population genetic analyses: why it is important, and how to correct it.Lachance, Joseph; Tishkoff, Sarah ABioEssays : news and reviews in molecular, cellular and developmental biology2013 Sep780-623836388
The developmental transcriptome of the mosquito Aedes aegypti, an invasive species and major arbovirus vector.Akbari, Omar S; Antoshechkin, Igor; Amrhein, Henry; Williams, Brian; Diloreto, Race; Sandler, Jeremy; Hay, Bruce AG3 (Bethesda, Md.)2013 Sep1493-50923833213
R-loops and nicks initiate DNA breakage and genome instability in non-growing Escherichia coli.Wimberly, Hallie; Shee, Chandan; Thornton, P C; Sivaramakrishnan, Priya; Rosenberg, Susan M; Hastings, P JNature communications2013 Jul 5211523828459
Intracellular temperature mapping with fluorescence-assisted photoacoustic-thermometry.Gao, Liang; Zhang, Chi; Li, Chiye; Wang, Lihong VApplied physics letters.2013 May 13;19370523825801
Thalamocortical mechanisms for the anteriorization of alpha rhythms during propofol-induced unconsciousness.Vijayan, Sujith; Ching, Shinung; Purdon, Patrick L; Brown, Emery N; Kopell, Nancy JThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Jul 311070-523825412
Great ape genetic diversity and population history.Prado-Martinez, Javier; Sudmant, Peter H; Kidd, Jeffrey M; Li, Heng; Kelley, Joanna L; Lorente-Galdos, Belen; Veeramah, Krishna R; Woerner, August E; O'Connor, Timothy D; Santpere, Gabriel; Cagan, Alexander; Theunert, Christoph; Casals, Ferran; Laayouni, Nature2013 Jul 3NULL23823723
Engineering customized TALE nucleases (TALENs) and TALE transcription factors by fast ligation-based automatable solid-phase high-throughput (FLASH) assembly.Reyon, Deepak; Maeder, Morgan L; Khayter, Cyd; Tsai, Shengdar Q; Foley, Jonathan E; Sander, Jeffry D; Joung, J KeithCurrent protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.]2013 JulUnit 12.1623821439
The aging brain and anesthesia.Brown, Emery N; Purdon, Patrick LCurrent opinion in anaesthesiology2013 Aug414-923820102
The NADPH metabolic network regulates human ýýB-crystallin cardiomyopathy and reductive stress in Drosophila melanogaster.Xie, Heng B; Cammarato, Anthony; Rajasekaran, Namakkal S; Zhang, Huali; Suggs, Jennifer A; Lin, Ho-Chen; Bernstein, Sanford I; Benjamin, Ivor J; Golic, Kent GPLoS genetics2013 June100354423818860
The Role of Aromatic-Aromatic Interactions in Strand-Strand Stabilization of ýý-Sheets.Budyak, Ivan L; Zhuravleva, Anastasia; Gierasch, Lila MJournal of molecular biology2013 Sep 233522-3523810905
Homeostatic regulation of dendritic dynamics in a motor map in vivo.Kishore, Sandeep; Fetcho, Joseph RNature communications2013 Jun 27208623803587
The microRNA regulation of stem cells.Huang, Xiao Albert; Lin, HaifanWiley interdisciplinary reviews. Developmental biology2012 Jan-Feb83-9523801669
Modeling Spatial Correlation of DNA Deformation: DNA Allostery in Protein Binding.Xu, Xinliang; Ge, Hao; Gu, Chan; Gao, Yi Qin; Wang, Siyuan S; Thio, Beng Joo Reginald; Hynes, James T; Xie, X Sunney; Cao, JianshuThe journal of physical chemistry. B2013 Jul 8NULL23795567
High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells.Fu, Yanfang; Foden, Jennifer A; Khayter, Cyd; Maeder, Morgan L; Reyon, Deepak; Joung, J Keith; Sander, Jeffry DNature biotechnology2013 Jun 23NULL23792628
GABAergic lateral interactions tune the early stages of visual processing in Drosophila.Freifeld, Limor; Clark, Damon A; Schnitzer, Mark J; Horowitz, Mark A; Clandinin, Thomas RNeuron2013 Jun 191075-8923791198
A bacterial export system for generating extracellular amyloid aggregates.Sivanathan, Viknesh; Hochschild, AnnNature protocols2013 Jul1381-9023787895
Generating Better Medicines for Cancer.Dunn, Stuart S; Byrne, James D; Perry, Jillian L; Chen, Kai; Desimone, Joseph MACS macro letters2013 Apr 24393-39723772351
Visual predictions in the orbitofrontal cortex rely on associative content.Chaumon, Maximilien; Kveraga, Kestutis; Barrett, Lisa Feldman; Bar, MosheCerebral cortex (New York, N.Y. : 1991).2014 Nov;2899-90723771980
Real-time Closed-loop Control in a Rodent Model of Medically Induced Coma Using Burst Suppression.Ching, Shinung; Liberman, Max Y; Chemali, Jessica J; Westover, M Brandon; Kenny, Jonathan; Solt, Ken; Purdon, Patrick L; Brown, Emery NAnesthesiology2013 Jun 13NULL23770601
Choroid-plexus-derived Otx2 homeoprotein constrains adult cortical plasticity.Spatazza, Julien; Lee, Henry H C; Di Nardo, Ariel A; Tibaldi, Lorenzo; Joliot, Alain; Hensch, Takao K; Prochiantz, AlainCell reports2013 Jun 271815-2323770240
Specific kinematics and motor-related neurons for aversive chemotaxis in Drosophila.Gao, Xiaojing J; Potter, Christopher J; Gohl, Daryl M; Silies, Marion; Katsov, Alexander Y; Clandinin, Thomas R; Luo, LiqunCurrent biology : CB2013 Jul 81163-7223770185
Microbial persistence and the road to drug resistance.Cohen, Nadia R; Lobritz, Michael A; Collins, James JCell host & microbe2013 Jun 12632-4223768488
Photoacoustic Microscopy in Tissue Engineering.Cai, Xin; Zhang, Yu Shrike; Xia, Younan; Wang, Lihong VMaterials today (Kidlington, England)2013 Mar 167-7723766667
Two-photon calcium imaging during fictive navigation in virtual environments.Ahrens, Misha B; Huang, Kuo Hua; Narayan, Sujatha; Mensh, Brett D; Engert, FlorianFrontiers in neural circuits.2013;23761738
Discovery of Cryptic Polyketide Metabolites from Dermatophytes Using Heterologous Expression in Aspergillus nidulans.Yin, Wen-Bing; Chooi, Yit Heng; Smith, Adam R; Cacho, Ralph A; Hu, Youcai; White, Theodore C; Tang, YiACS synthetic biology2013 Jun 1123758576
Computational analysis of anti-HIV-1 antibody neutralization panel data to identify potential functional epitope residues.West Jr, Anthony P; Scharf, Louise; Horwitz, Joshua; Klein, Florian; Nussenzweig, Michel C; Bjorkman, Pamela JProceedings of the National Academy of Sciences of the United States of America2013 Jun 1023754383
The cortical angiome: an interconnected vascular network with noncolumnar patterns of blood flow.Blinder, Pablo; Tsai, Philbert S; Kaufhold, John P; Knutsen, Per M; Suhl, Harry; Kleinfeld, DavidNature neuroscience2013 Jul889-9723749145
Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome.Modi, Sheetal R; Lee, Henry H; Spina, Catherine S; Collins, James JNature2013 Jun 9NULL23748443
A closed-loop anesthetic delivery system for real-time control of burst suppression.Liberman, Max Y; Ching, Shinung; Chemali, Jessica; Brown, Emery NJournal of neural engineering2013 Aug4600423744607
HCN4 dynamically marks the first heart field and conduction system precursors.Liang, Xingqun; Wang, Gang; Lin, Lizhu; Lowe, Jennifer; Zhang, Qingquan; Bu, Lei; Chen, Yihan; Chen, Ju; Sun, Yunfu; Evans, Sylvia MCirculation research2013 Aug 2399-40723743334
Cortical control of arm movements: a dynamical systems perspective.Shenoy, Krishna V; Sahani, Maneesh; Churchland, Mark MAnnual review of neuroscience2013 Jul 8337-5923725001
piggyBac transposase tools for genome engineering.Li, Xianghong; Burnight, Erin R; Cooney, Ashley L; Malani, Nirav; Brady, Troy; Sander, Jeffry D; Staber, Janice; Wheelan, Sarah J; Joung, J Keith; McCray Jr, Paul B; Bushman, Frederic D; Sinn, Patrick L; Craig, Nancy LProceedings of the National Academy of Sciences of the United States of America2013 Jun 18E2279-8723723351
Mapping and cracking sensorimotor circuits in genetic model organisms.Clark, Damon A; Freifeld, Limor; Clandinin, Thomas RNeuron2013 May 22583-9523719159
Eosinophils secrete IL-4 to facilitate liver regeneration.Goh, Y P Sharon; Henderson, Neil C; Heredia, Jose E; Red Eagle, Alex; Odegaard, Justin I; Lehwald, Nadja; Nguyen, Khoa D; Sheppard, Dean; Mukundan, Lata; Locksley, Richard M; Chawla, AjayProceedings of the National Academy of Sciences of the United States of America2013 Jun 119914-923716700
A Reactive Oxygen Species (ROS)-Responsive Polymer for Safe, Efficient, and Targeted Gene Delivery in Cancer Cells.Shim, Min Suk; Xia, YounanAngewandte Chemie (International ed. in English)2013 Jul 16926-923716349
Untangling the web: the diverse functions of the PIWI/piRNA pathway.Mani, Sneha Ramesh; Juliano, Celina EMolecular reproduction and development2013 Aug632-6423712694
The roles of monkey M1 neuron classes in movement preparation and execution.Kaufman, Matthew T; Churchland, Mark M; Shenoy, Krishna VJournal of neurophysiology2013 Aug817-2523699057
Connection between Oligomeric State and Gating Characteristics of Mechanosensitive Ion Channels.Haselwandter, Christoph A; Phillips, RobPLoS computational biology2013 Maye100305523696720
Slow-sound photoacoustic microscopy.Zhang, Chi; Zhou, Yong; Li, Chiye; Wang, Lihong VApplied physics letters.2013 Apr 22;16370223696693
Perfusion Imaging of Focal Cortical Dysplasia Using Arterial Spin Labeling: Correlation With Histopathological Vascular Density.Wintermark, Pia; Lechpammer, Mirna; Warfield, Simon K; Kosaras, Bela; Takeoka, Masanori; Poduri, Annapurna; Madsen, Joseph R; Bergin, Ann M; Whalen, Stephen; Jensen, Frances EJournal of child neurology2013 Nov1474-148223696629
Evolutionary dynamics and information hierarchies in biological systems.Walker, Sara Imari; Callahan, Benjamin J; Arya, Gaurav; Barry, J David; Bhattacharya, Tanmoy; Grigoryev, Sergei; Pellegrini, Matteo; Rippe, Karsten; Rosenberg, Susan MAnnals of the New York Academy of Sciences2013 May 2023691975
Fragment-based drug discovery using NMR spectroscopy.Harner, Mary J; Frank, Andreas O; Fesik, Stephen WJournal of biomolecular NMR2013 May 1823686385
Comparative analysis of RNA sequencing methods for degraded or low-input samples.Adiconis, Xian; Borges-Rivera, Diego; Satija, Rahul; Deluca, David S; Busby, Michele A; Berlin, Aaron M; Sivachenko, Andrey; Thompson, Dawn Anne; Wysoker, Alec; Fennell, Timothy; Gnirke, Andreas; Pochet, Nathalie; Regev, Aviv; Levin, Joshua ZNature methods2013 May 1923685885
Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells.Shalek, Alex K; Satija, Rahul; Adiconis, Xian; Gertner, Rona S; Gaublomme, Jellert T; Raychowdhury, Raktima; Schwartz, Schraga; Yosef, Nir; Malboeuf, Christine; Lu, Diana; Trombetta, John J; Gennert, Dave; Gnirke, Andreas; Goren, Alon; Hacohen, Nir; LevinNature2013 Jun 13236-4023685454
An unsolved mystery: The target-recognizing RNA species of microRNA genes.Chen, Chang-ZhengBiochimie2013 May 1423685275
Evaluation of the pathogenesis and treatment of Mycobacterium marinum infection in zebrafish.Takaki, Kevin; Davis, J Muse; Winglee, Kathryn; Ramakrishnan, LalitaNature protocols.2013 Jun;1114-2423680983
Neural control of sexually dimorphic behaviors.Manoli, Devanand S; Fan, Pu; Fraser, Eleanor J; Shah, Nirao MCurrent opinion in neurobiology2013 Jun330-823680385
Surpassing fundamental limits of oscillators using nonlinear resonators.Villanueva, L G; Kenig, E; Karabalin, R B; Matheny, M H; Lifshitz, Ron; Cross, M C; Roukes, M LPhysical review letters2013 Apr 2617720823679770
Activity-dependent gene expression in honey bee mushroom bodies in response to orientation flight.Lutz, Claudia C; Robinson, Gene EThe Journal of experimental biology2013 Jun 12031-823678099
Future of the particle replication in nonwetting templates (PRINT) technology.Xu, Jing; Wong, Dominica H C; Byrne, James D; Chen, Kai; Bowerman, Charles; DeSimone, Joseph MAngewandte Chemie (International ed. in English)2013 Jun 246580-923670869
Progress in gene therapy for neurological disorders.Simonato, Michele; Bennett, Jean; Boulis, Nicholas M; Castro, Maria G; Fink, David J; Goins, William F; Gray, Steven J; Lowenstein, Pedro R; Vandenberghe, Luk H; Wilson, Thomas J; Wolfe, John H; Glorioso, Joseph CNature reviews. Neurology2013 Jun29823670108
ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering.Gaj, Thomas; Gersbach, Charles A; Barbas 3rd, Carlos FTrends in biotechnology2013 Jul397-40523664777
ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering.Gaj, Thomas; Gersbach, Charles A; Barbas 3rd, Carlos FTrends in biotechnology2013 May 823664777
Sexually dimorphic neurons in the ventromedial hypothalamus govern mating in both sexes and aggression in males.Yang, Cindy F; Chiang, Michael C; Gray, Daniel C; Prabhakaran, Mahalakshmi; Alvarado, Maricruz; Juntti, Scott A; Unger, Elizabeth K; Wells, James A; Shah, Nirao MCell2013 May 9896-90923663785
Short pathways to complexity generation: fungal peptidyl alkaloid multicyclic scaffolds from anthranilate building blocks.Walsh, Christopher T; Haynes, Stuart W; Ames, Brian D; Gao, Xue; Tang, YiACS chemical biology.2013 Jul 19;1366-8223659680
IL-7 production in murine lymphatic endothelial cells and induction in the setting of peripheral lymphopenia.Miller, Corey N; Hartigan-O'Connor, Dennis J; Lee, Myeong Sup; Laidlaw, Grace; Cornelissen, Ivo P; Matloubian, Mehrdad; Coughlin, Shaun R; McDonald, Donald M; McCune, Joseph MInternational immunology2013 Aug471-8323657000
Novel synthetic medea selfish genetic elements drive population replacement in Drosophila; a theoretical exploration of medea-dependent population suppression.Akbari, Omar S; Chen, Chun-Hong; Marshall, John M; Huang, Haixia; Antoshechkin, Igor; Hay, Bruce AACS synthetic biology.2014 Dec 19;915-2823654248
One-step generation of mice carrying mutations in multiple genes by CRISPR/Cas-mediated genome engineering.Wang, Haoyi; Yang, Hui; Shivalila, Chikdu S; Dawlaty, Meelad M; Cheng, Albert W; Zhang, Feng; Jaenisch, RudolfCell2013 May 9910-823643243
Arboretum: reconstruction and analysis of the evolutionary history of condition-specific transcriptional modules.Roy, Sushmita; Wapinski, Ilan; Pfiffner, Jenna; French, Courtney; Socha, Amanda; Konieczka, Jay; Habib, Naomi; Kellis, Manolis; Thompson, Dawn; Regev, AvivGenome research.2013 Jun;1039-5023640720
Physiology: Inflammation links ageing to the brain.Gabuzda, Dana; Yankner, Bruce ANature2013 May 9197-823636321
Biomimicry enhances sequential reactions of tethered glycolytic enzymes, TPI and GAPDHS.Mukai, Chinatsu; Gao, Lizeng; Bergkvist, Magnus; Nelson, Jacquelyn L; Hinchman, Meleana M; Travis, Alexander JPloS one2013e6143423626684
Macrophage biology in development, homeostasis and disease.Wynn, Thomas A; Chawla, Ajay; Pollard, Jeffrey WNature2013 Apr 25445-5523619691
Progress in gene therapy for neurological disorders.Simonato, Michele; Bennett, Jean; Boulis, Nicholas M; Castro, Maria G; Fink, David J; Goins, William F; Gray, Steven J; Lowenstein, Pedro R; Vandenberghe, Luk H; Wilson, Thomas J; Wolfe, John H; Glorioso, Joseph CNature reviews. Neurology2013 May277-9123609618
Patterns of nucleotide and haplotype diversity at ICAM-1 across global human populations with varying levels of malaria exposure.Gomez, Felicia; Tomas, Gil; Ko, Wen-Ya; Ranciaro, Alessia; Froment, Alain; Ibrahim, Muntaser; Lema, Godfrey; Nyambo, Thomas B; Omar, Sabah A; Wambebe, Charles; Hirbo, Jibril B; Rocha, Jorge; Tishkoff, Sarah AHuman genetics2013 Sep987-9923609612
Encoding through patterns: regression tree-based neuronal population models.Haslinger, Robert; Pipa, Gordon; Lewis, Laura D; Nikolic, Danko; Williams, Ziv; Brown, EmeryNeural computation2013 Aug1953-9323607564
Neural evidence that human emotions share core affective properties.Wilson-Mendenhall, Christine D; Barrett, Lisa Feldman; Barsalou, Lawrence WPsychological science2013 Jun947-5623603916
Photoacoustic and optical coherence tomography of epilepsy with high temporal and spatial resolution and dual optical contrasts.Tsytsarev, Vassiliy; Rao, Bin; Maslov, Konstantin I; Li, Li; Wang, Lihong VJournal of neuroscience methods2013 Jun 15142-523603664
The immune system as a sensor of the metabolic state.Odegaard, Justin I; Chawla, AjayImmunity2013 Apr 18644-5423601683
Sex differences in the neural correlates of affective experience.Moriguchi, Yoshiya; Touroutoglou, Alexandra; Dickerson, Bradford C; Barrett, Lisa FeldmanSocial cognitive and affective neuroscience.2014 May;591-60023596188
Analysis of the murine immune response to pulmonary delivery of precisely fabricated nano- and microscale particles.Roberts, Reid A; Shen, Tammy; Allen, Irving C; Hasan, Warefta; DeSimone, Joseph M; Ting, Jenny P YPloS one2013e6211523593509
A real-time brain-machine interface combining motor target and trajectory intent using an optimal feedback control design.Shanechi, Maryam M; Williams, Ziv M; Wornell, Gregory W; Hu, Rollin C; Powers, Marissa; Brown, Emery NPloS one2013e5904923593130
Higher frequency of genetic variants conferring increased risk for ADRs for commonly used drugs treating cancer, AIDS and tuberculosis in persons of African descent.Aminkeng, F; Ross, C J D; Rassekh, S R; Brunham, L R; Sistonen, J; Dube, M-P; Ibrahim, M; Nyambo, T B; Omar, S A; Froment, A; Bodo, J-M; Tishkoff, S; Carleton, B C; Hayden, M RThe pharmacogenomics journal2013 Apr 1623588107
Teaching the principles of statistical dynamics.Ghosh, Kingshuk; Dill, Ken A; Inamdar, Mandar M; Seitaridou, Effrosyni; Phillips, RobAmerican journal of physics2006 Feb 1123-13323585693
The Glove-like Structure of the Conserved Membrane Protein TatC Provides Insight into Signal Sequence Recognition in Twin-Arginine Translocation.Ramasamy, Sureshkumar; Abrol, Ravinder; Suloway, Christian J M; Clemons Jr, William MStructure (London, England : 1993)2013 May 7777-8823583035
TNF dually mediates resistance and susceptibility to mycobacteria via mitochondrial reactive oxygen species.Roca, Francisco J; Ramakrishnan, LalitaCell2013 Apr 25521-3423582643
Type 2 innate signals stimulate fibro/adipogenic progenitors to facilitate muscle regeneration.Heredia, Jose E; Mukundan, Lata; Chen, Francis M; Mueller, Alisa A; Deo, Rahul C; Locksley, Richard M; Rando, Thomas A; Chawla, AjayCell2013 Apr 11376-8823582327
Monitoring of post-translational modification dynamics with genetically encoded fluorescent reporters.Hertel, Fabian; Zhang, JinBiopolymers2013 Apr 10NULL23576192
Design and validation of a real-time spiking-neural-network decoder for brain-machine interfaces.Dethier, Julie; Nuyujukian, Paul; Ryu, Stephen I; Shenoy, Krishna V; Boahen, KwabenaJournal of neural engineering2013 Jun03600823574919
Design and validation of a real-time spiking-neural-network decoder for brain-machine interfaces.Dethier, Julie; Nuyujukian, Paul; Ryu, Stephen I; Shenoy, Krishna V; Boahen, KwabenaJournal of neural engineering2013 Jun3600823574919
Multifunctional three-dimensional macroporous nanoelectronic networks for smart materials.Liu, Jia; Xie, Chong; Dai, Xiaochuan; Jin, Lihua; Zhou, Wei; Lieber, Charles MProceedings of the National Academy of Sciences of the United States of America2013 Apr 236694-923569270
Regulation of immune responses and tolerance: the microRNA perspective.Chen, Chang-Zheng; Schaffert, Steven; Fragoso, Rita; Loh, ChristinaImmunological reviews2013 May112-2823550642
Construction of human activity-based phosphorylation networks.Newman, Robert H; Hu, Jianfei; Rho, Hee-Sool; Xie, Zhi; Woodard, Crystal; Neiswinger, John; Cooper, Christopher; Shirley, Matthew; Clark, Hillary M; Hu, Shaohui; Hwang, Woochang; Jeong, Jun Seop; Wu, George; Lin, Jimmy; Gao, Xinxin; Ni, Qiang; Goel, Renu;Molecular systems biology201365523549483
Construction of human activity-based phosphorylation networks.Newman, Robert H; Hu, Jianfei; Rho, Hee-Sool; Xie, Zhi; Woodard, Crystal; Neiswinger, John; Cooper, Christopher; Shirley, Matthew; Clark, Hillary M; Hu, Shaohui; Hwang, Woochang; Jeong, Jun Seop; Wu, George; Lin, Jimmy; Gao, Xinxin; Ni, Qiang; Goel, Renu; Xia, Shuli; Ji, Hongkai; Dalby, Kevin N; Birnbaum, Morris J; Cole, Philip A; Knapp, Stefan; Ryazanov, Alexey G; Zack, Donald J; Blackshaw, Seth; Pawson, Tony; Gingras, Anne-Claude; Desiderio, Stephen; Pandey, Akhilesh; Turk, Benjamin E; Zhang, Jin; Zhu, Heng; Qian, JiangMolecular systems biology201365523549483
TALEN-based Gene Correction for Epidermolysis Bullosa.Osborn, Mark J; Starker, Colby G; McElroy, Amber N; Webber, Beau R; Riddle, Megan J; Xia, Lily; Defeo, Anthony P; Gabriel, Richard; Schmidt, Manfred; Von Kalle, Christof; Carlson, Daniel F; Maeder, Morgan L; Joung, J Keith; Wagner, John E; Voytas, Daniel Molecular therapy : the journal of the American Society of Gene Therapy2013 Jun1151-923546300
Bumetanide enhances phenobarbital efficacy in a rat model of hypoxic neonatal seizures.Cleary, Ryan T; Sun, Hongyu; Huynh, Thanhthao; Manning, Simon M; Li, Yijun; Rotenberg, Alexander; Talos, Delia M; Kahle, Kristopher T; Jackson, Michele; Rakhade, Sanjay N; Berry, Gerard; Jensen, Frances EPloS one2013e5714823536761
Facile and stabile linkages through tyrosine: bioconjugation strategies with the tyrosine-click reaction.Ban, Hitoshi; Nagano, Masanobu; Gavrilyuk, Julia; Hakamata, Wataru; Inokuma, Tsubasa; Barbas 3rd, Carlos FBioconjugate chemistry2013 Apr 17520-3223534985
How bacteria survive an acid trip.Hingorani, Karan S; Gierasch, Lila MProceedings of the National Academy of Sciences of the United States of America2013 Apr 25279-8023530238
Hunger-promoting hypothalamic neurons modulate effector and regulatory T-cell responses.Matarese, Giuseppe; Procaccini, Claudio; Menale, Ciro; Kim, Jae Geun; Kim, Jung Dae; Diano, Sabrina; Diano, Nadia; De Rosa, Veronica; Dietrich, Marcelo O; Horvath, Tamas LProceedings of the National Academy of Sciences of the United States of America2013 Apr 96193-823530205
Molecular tools for chemical biotechnology.Galanie, Stephanie; Siddiqui, Michael S; Smolke, Christina DCurrent opinion in biotechnology2013 Mar 2223528237
Macaque monkeys perceive the flash lag illusion.Subramaniyan, Manivannan; Ecker, Alexander S; Berens, Philipp; Tolias, Andreas SPloS one2013e5878823527024
Single-molecule imaging of transcription factor binding to DNA in live mammalian cells.Gebhardt, J Christof M; Suter, David M; Roy, Rahul; Zhao, Ziqing W; Chapman, Alec R; Basu, Srinjan; Maniatis, Tom; Xie, X SunneyNature methods2013 May421-623524394
Global analysis of phosphorylation networks in humans.Hu, Jianfei; Rho, Hee-Sool; Newman, Robert H; Hwang, Woochang; Neiswinger, John; Zhu, Heng; Zhang, Jin; Qian, JiangBiochimica et biophysica acta2013 Mar 2123524292
Global analysis of phosphorylation networks in humans.Hu, Jianfei; Rho, Hee-Sool; Newman, Robert H; Hwang, Woochang; Neiswinger, John; Zhu, Heng; Zhang, Jin; Qian, JiangBiochimica et biophysica acta2013 Mar 21NULL23524292
Nanotools for neuroscience and brain activity mapping.Alivisatos, A Paul; Andrews, Anne M; Boyden, Edward S; Chun, Miyoung; Church, George M; Deisseroth, Karl; Donoghue, John P; Fraser, Scott E; Lippincott-Schwartz, Jennifer; Looger, Loren L; Masmanidis, Sotiris; McEuen, Paul L; Nurmikko, Arto V; Park, HongkACS nano2013 Mar 261850-6623514423
Deciphering molecular circuits from genetic variation underlying transcriptional responsiveness to stimuli.Gat-Viks, Irit; Chevrier, Nicolas; Wilentzik, Roni; Eisenhaure, Thomas; Raychowdhury, Raktima; Steuerman, Yael; Shalek, Alex K; Hacohen, Nir; Amit, Ido; Regev, AvivNature biotechnology2013 Apr342-923503680
High-sensitivity ultrasound-modulated optical tomography with a photorefractive polymer.Suzuki, Yuta; Lai, Puxiang; Xu, Xiao; Wang, LihongOptics letters2013 Mar 15899-90123503253
Statistical mechanics of Monod-Wyman-Changeux (MWC) models.Marzen, Sarah; Garcia, Hernan G; Phillips, RobJournal of molecular biology2013 May 131433-6023499654
Altered social behavior and neuronal development in mice lacking the Uba6-Use1 ubiquitin transfer system.Lee, Peter C W; Dodart, Jean-Cosme; Aron, Liviu; Finley, Lydia W; Bronson, Roderick T; Haigis, Marcia C; Yankner, Bruce A; Harper, J WadeMolecular cell2013 Apr 25172-8423499007
Homo-dimerization and ligand binding by the leucine-rich repeat domain at RHG1/RFS2 underlying resistance to two soybean pathogens.Afzal, Ahmed J; Srour, Ali; Goil, Abhishek; Vasudaven, Sheeja; Liu, Tianyun; Samudrala, Ram; Dogra, Navneet; Kohli, Punit; Malakar, Ayan; Lightfoot, David ABMC plant biology20134323497186
Nonlinear mode-coupling in nanomechanical systems.Matheny, M H; Villanueva, L G; Karabalin, R B; Sader, J E; Roukes, M LNano letters2013 Apr 101622-623496001
A plasmon-assisted optofluidic (PAOF) system for measuring the photothermal conversion efficiencies of gold nanostructures and controlling an electrical switch.Zeng, Jie; Goldfeld, David; Xia, YounanAngewandte Chemie (International ed. in English)2013 Apr 84169-7323494970
The fumagillin biosynthetic gene cluster in Aspergillus fumigatus encodes a cryptic terpene cyclase involved in the formation of ýý-trans-bergamotene.Lin, Hsiao-Ching; Chooi, Yit-Heng; Dhingra, Sourabh; Xu, Wei; Calvo, Ana M; Tang, YiJournal of the American Chemical Society2013 Mar 274616-923488861
Electroencephalogram signatures of loss and recovery of consciousness from propofol.Purdon, Patrick L; Pierce, Eric T; Mukamel, Eran A; Prerau, Michael J; Walsh, John L; Wong, Kin Foon K; Salazar-Gomez, Andres F; Harrell, Priscilla G; Sampson, Aaron L; Cimenser, Aylin; Ching, ShiNung; Kopell, Nancy J; Tavares-Stoeckel, Casie; Habeeb, KatProceedings of the National Academy of Sciences of the United States of America2013 Mar 19E1142-5123487781
Nanowire electrodes for high-density stimulation and measurement of neural circuits.Robinson, Jacob T; Jorgolli, Marsela; Park, HongkunFrontiers in neural circuits20133823486552
Mammalian target of rapamycin complex 1 activation negatively regulates Polo-like kinase 2-mediated homeostatic compensation following neonatal seizures.Sun, Hongyu; Kosaras, Bela; Klein, Peter M; Jensen, Frances EProceedings of the National Academy of Sciences of the United States of America2013 Mar 265199-20423479645
Neuroscience. The brain activity map.Alivisatos, A Paul; Chun, Miyoung; Church, George M; Deisseroth, Karl; Donoghue, John P; Greenspan, Ralph J; McEuen, Paul L; Roukes, Michael L; Sejnowski, Terrence J; Weiss, Paul S; Yuste, RafaelScience (New York, N.Y.)2013 Mar 151284-523470729
Looking within the zebrafish to understand the tuberculous granuloma.Ramakrishnan, LalitaAdvances in experimental medicine and biology2013251-6623468113
Dynamic regulatory network controlling TH17 cell differentiation.Yosef, Nir; Shalek, Alex K; Gaublomme, Jellert T; Jin, Hulin; Lee, Youjin; Awasthi, Amit; Wu, Chuan; Karwacz, Katarzyna; Xiao, Sheng; Jorgolli, Marsela; Gennert, David; Satija, Rahul; Shakya, Arvind; Lu, Diana Y; Trombetta, John J; Pillai, Meenu R; RatcliNature2013 Apr 25461-823467089
Induction of pathogenic TH17 cells by inducible salt-sensing kinase SGK1.Wu, Chuan; Yosef, Nir; Thalhamer, Theresa; Zhu, Chen; Xiao, Sheng; Kishi, Yasuhiro; Regev, Aviv; Kuchroo, Vijay KNature2013 Apr 25513-723467085
Beyond transposons: the epigenetic and somatic functions of the Piwi-piRNA mechanism.Peng, Jamy C; Lin, HaifanCurrent opinion in cell biology2013 Apr190-423465540
Retinal gene therapy coming of age.Cepko, Connie L; Vandenberghe, Luk HHuman gene therapy.2013 Mar;242-423458444
Imaging trans-cellular neurexin-neuroligin interactions by enzymatic probe ligation.Liu, Daniel S; Loh, Ken H; Lam, Stephanie S; White, Katharine A; Ting, Alice YPloS one2013e5282323457442
Functional inhibition of UQCRB suppresses angiogenesis in zebrafish.Cho, Yoon Sun; Jung, Hye Jin; Seok, Seung Hyeok; Payumo, Alexander Y; Chen, James K; Kwon, Ho JeongBiochemical and biophysical research communications2013 Apr 19396-40023454382
Early folding events protect aggregation-prone regions of a ýý-rich protein.Budyak, Ivan L; Krishnan, Beena; Marcelino-Cruz, Anna M; Ferrolino, Mylene C; Zhuravleva, Anastasia; Gierasch, Lila MStructure (London, England : 1993)2013 Mar 5476-8523454187
EcdGHK are three tailoring iron oxygenases for amino acid building blocks of the echinocandin scaffold.Jiang, Wei; Cacho, Ralph A; Chiou, Grace; Garg, Neil K; Tang, Yi; Walsh, Christopher TJournal of the American Chemical Society2013 Mar 204457-6623451921
Synthetic nanoelectronic probes for biological cells and tissues.Tian, Bozhi; Lieber, Charles MAnnual review of analytical chemistry (Palo Alto, Calif.)2013 Jun 1231-5123451719
A brain-to-brain interface for real-time sharing of sensorimotor information.Pais-Vieira, Miguel; Lebedev, Mikhail; Kunicki, Carolina; Wang, Jing; Nicolelis, Miguel A LScientific reports.2013;23448946
Simultaneous top-down modulation of the primary somatosensory cortex and thalamic nuclei during active tactile discrimination.Pais-Vieira, Miguel; Lebedev, Mikhail A; Wiest, Michael C; Nicolelis, Miguel A LThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Feb 274076-9323447616
Identification of nonvisual photomotor response cells in the vertebrate hindbrain.Kokel, David; Dunn, Timothy W; Ahrens, Misha B; Alshut, Rudiger; Cheung, Chung Yan J; Saint-Amant, Louis; Bruni, Giancarlo; Mateus, Rita; van Ham, Tjakko J; Shiraki, Tomoya; Fukada, Yoshitaka; Kojima, Daisuke; Yeh, Jing-Ruey J; Mikut, Ralf; von Lintig, JoThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Feb 273834-4323447595
Reflection-mode multifocal optical-resolution photoacoustic microscopy.Li, Guo; Maslov, Konstantin I; Wang, Lihong VJournal of biomedical optics2013 Mar3050123446704
A major epigenetic programming mechanism guided by piRNAs.Huang, Xiao A; Yin, Hang; Sweeney, Sarah; Raha, Debasish; Snyder, Michael; Lin, HaifanDevelopmental cell2013 Mar 11502-1623434410
Fungicidal drugs induce a common oxidative-damage cellular death pathway.Belenky, Peter; Camacho, Diogo; Collins, James JCell reports2013 Feb 21350-823416050
The NeST long ncRNA controls microbial susceptibility and epigenetic activation of the interferon-ýý locus.Gomez, J Antonio; Wapinski, Orly L; Yang, Yul W; Bureau, Jean-Francois; Gopinath, Smita; Monack, Denise M; Chang, Howard Y; Brahic, Michel; Kirkegaard, KarlaCell2013 Feb 14743-5423415224
Synthetic biology: advancing the design of diverse genetic systems.Wang, Yen-Hsiang; Wei, Kathy Y; Smolke, Christina DAnnual review of chemical and biomolecular engineering201369-10223413816
Probing allostery through DNA.Kim, Sangjin; Brostromer, Erik; Xing, Dong; Jin, Jianshi; Chong, Shasha; Ge, Hao; Wang, Siyuan; Gu, Chan; Yang, Lijiang; Gao, Yi Qin; Su, Xiao-dong; Sun, Yujie; Xie, X SunneyScience (New York, N.Y.)2013 Feb 15816-923413354
Bridging the transgenerational gap with epigenetic memory.Lim, Jana P; Brunet, AnneTrends in genetics : TIG2013 Mar176-8623410786
Observation and characterization of the vestige of the jamming transition in a thermal three-dimensional system.Caswell, Thomas A; Zhang, Zexin; Gardel, Margaret L; Nagel, Sidney RPhysical review. E, Statistical, nonlinear, and soft matter physics.2013 Jan;1230323410327
The proteomic response to mutants of the Escherichia coli RNA degradosome.Zhou, Li; Zhang, Ang B; Wang, Rong; Marcotte, Edward M; Vogel, ChristineMolecular bioSystems2013 Apr 5750-723403814
Perceiving invisible light through a somatosensory cortical prosthesis.Thomson, Eric E; Carra, Rafael; Nicolelis, Miguel A LNature communications2013148223403583
Robust, synergistic regulation of human gene expression using TALE activators.Maeder, Morgan L; Linder, Samantha J; Reyon, Deepak; Angstman, James F; Fu, Yanfang; Sander, Jeffry D; Joung, J KeithNature methods2013 Mar243-523396285
Long-term dynamics of CA1 hippocampal place codes.Ziv, Yaniv; Burns, Laurie D; Cocker, Eric D; Hamel, Elizabeth O; Ghosh, Kunal K; Kitch, Lacey J; El Gamal, Abbas; Schnitzer, Mark JNature neuroscience2013 Mar264-623396101
In vitro human corticogenesis.Wang, Yanling; Dolmetsch, RicardoNeuron2013 Feb 6379-8123395367
A comprehensive approach to zinc-finger recombinase customization enables genomic targeting in human cells.Gaj, Thomas; Mercer, Andrew C; Sirk, Shannon J; Smith, Heather L; Barbas 3rd, Carlos FNucleic acids research2013 Apr 13937-4623393187
Comparison study of gold nanohexapods, nanorods, and nanocages for photothermal cancer treatment.Wang, Yucai; Black, Kvar C L; Luehmann, Hannah; Li, Weiyang; Zhang, Yu; Cai, Xin; Wan, Dehui; Liu, Si-Yun; Li, Max; Kim, Paul; Li, Zhi-Yuan; Wang, Lihong V; Liu, Yongjian; Xia, YounanACS nano2013 Mar 262068-7723383982
Theoretical and experimental dissection of DNA loop-mediated repression.Boedicker, James Q; Garcia, Hernan G; Phillips, RobPhysical review letters2013 Jan 401810123383841
AAV9 targets cone photoreceptors in the nonhuman primate retina.Vandenberghe, Luk H; Bell, Peter; Maguire, Albert M; Xiao, Ru; Hopkins, Tim B; Grant, Rebecca; Bennett, Jean; Wilson, James MPloS one2013e5346323382846
Medical school gift restriction policies and physician prescribing of newly marketed psychotropic medications: difference-in-differences analysis.King, Marissa; Essick, Connor; Bearman, Peter; Ross, Joseph SBMJ (Clinical research ed.)2013f26423372175
Systematic identification of signal-activated stochastic gene regulation.Neuert, Gregor; Munsky, Brian; Tan, Rui Zhen; Teytelman, Leonid; Khammash, Mustafa; van Oudenaarden, AlexanderScience (New York, N.Y.)2013 Feb 1584-723372015
Physics. Measuring mass in seconds.Debs, John E; Robins, Nicholas P; Close, John DScience (New York, N.Y.)2013 Feb 1532-323372004
Proteomic mapping of mitochondria in living cells via spatially restricted enzymatic tagging.Rhee, Hyun-Woo; Zou, Peng; Udeshi, Namrata D; Martell, Jeffrey D; Mootha, Vamsi K; Carr, Steven A; Ting, Alice YScience (New York, N.Y.)2013 Mar 151328-3123371551
Genome mining of a prenylated and immunosuppressive polyketide from pathogenic fungi.Chooi, Yit-Heng; Fang, Jinxu; Liu, Hong; Filler, Scott G; Wang, Pin; Tang, YiOrganic letters2013 Feb 15780-323368997
A spatially-regularized dynamic source localization algorithm for EEG.Pirondini, E; Babadi, B; Lamus, C; Brown, E N; Purdon, P LConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20126752-523367479
A fast iterative greedy algorithm for MEG source localization.Obregon-Henao, G; Babadi, B; Lamus, C; Brown, E N; Purdon, P LConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20126748-5123367478
Beamforming approach to phase-amplitude modulation analysis of multi-channel EEG.Sampson, A L; Babadi, B; Prerau, M J; Mukamel, E A; Brown, E N; Purdon, P LConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20126731-423367474
A framework for relating neural activity to freely moving behavior.Foster, Justin D; Nuyujukian, Paul; Freifeld, Oren; Ryu, Stephen I; Black, Michael J; Shenoy, Krishna VConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20122736-923366491
A brain machine interface control algorithm designed from a feedback control perspective.Gilja, Vikash; Nuyujukian, Paul; Chestek, Cindy A; Cunningham, John P; Yu, Byron M; Fan, Joline M; Ryu, Stephen I; Shenoy, Krishna VConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20121318-2223366141
Transductive neural decoding for unsorted neuronal spikes of rat hippocampus.Chen, Zhe; Kloosterman, Fabian; Layton, Stuart; Wilson, Matthew AConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20121310-323366139
A superposable silicon synapse with programmable reversal potential.Benjamin, Ben V; Arthur, John V; Gao, Peiran; Merolla, Paul; Boahen, KwabenaConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference2012771-423366006
Microbiology. Undernutrition--looking within for answers.Relman, David AScience (New York, N.Y.).2013 Feb 1;530-223363770
RNA-guided editing of bacterial genomes using CRISPR-Cas systems.Jiang, Wenyan; Bikard, David; Cox, David; Zhang, Feng; Marraffini, Luciano ANature biotechnology2013 Mar233-923360965
Efficient genome editing in zebrafish using a CRISPR-Cas system.Hwang, Woong Y; Fu, Yanfang; Reyon, Deepak; Maeder, Morgan L; Tsai, Shengdar Q; Sander, Jeffry D; Peterson, Randall T; Yeh, J-R Joanna; Joung, J KeithNature biotechnology2013 Mar227-923360964
Radioluminescent gold nanocages with controlled radioactivity for real-time in vivo imaging.Wang, Yucai; Liu, Yongjian; Luehmann, Hannah; Xia, Xiaohu; Wan, Dehui; Cutler, Cathy; Xia, YounanNano letters2013 Feb 13581-523360442
Investigation of fungal iterative polyketide synthase functions using partially assembled intermediates.Gao, Zhizeng; Wang, Jingjing; Norquay, Amy K; Qiao, Kangjian; Tang, Yi; Vederas, John CJournal of the American Chemical Society2013 Feb 61735-823356934
Materials science: Synthetic polymers with biological rigidity.Gardel, Margaret LiseNature.2013 Jan 31;618-923354043
Large-scale brain networks in affective and social neuroscience: towards an integrative functional architecture of the brain.Barrett, Lisa Feldman; Satpute, Ajay BhaskarCurrent opinion in neurobiology2013 Jun361-7223352202
Distinct distal gut microbiome diversity and composition in healthy children from Bangladesh and the United States.Lin, Audrie; Bik, Elisabeth M; Costello, Elizabeth K; Dethlefsen, Les; Haque, Rashidul; Relman, David A; Singh, UpinderPloS one2013e5383823349750
Transcriptional reprogramming of mature CD4ýýý helper T cells generates distinct MHC class II-restricted cytotoxic T lymphocytes.Mucida, Daniel; Husain, Mohammad Mushtaq; Muroi, Sawako; van Wijk, Femke; Shinnakasu, Ryo; Naoe, Yoshinori; Reis, Bernardo Sgarbi; Huang, Yujun; Lambolez, Florence; Docherty, Michael; Attinger, Antoine; Shui, Jr-Wen; Kim, Gisen; Lena, Christopher J; SakagNature immunology2013 Mar281-923334788
Use of somatic mutations to quantify random contributions to mouse development.Zhou, Wenyu; Tan, Yunbing; Anderson, Donovan J; Crist, Eva M; Ruohola-Baker, Hannele; Salipante, Stephen J; Horwitz, Marshall SBMC genomics20133923327737
Engineering a BCR-ABL-activated caspase for the selective elimination of leukemic cells.Kurokawa, Manabu; Ito, Takahiro; Yang, Chih-Sheng; Zhao, Chen; Macintyre, Andrew N; Rizzieri, David A; Rathmell, Jeffrey C; Deininger, Michael W; Reya, Tannishtha; Kornbluth, SallyProceedings of the National Academy of Sciences of the United States of America2013 Feb 52300-523324740
Mechanistic evaluation of the pros and cons of digital RT-LAMP for HIV-1 viral load quantification on a microfluidic device and improved efficiency via a two-step digital protocol.Sun, Bing; Shen, Feng; McCalla, Stephanie E; Kreutz, Jason E; Karymov, Mikhail A; Ismagilov, Rustem FAnalytical chemistry2013 Feb 51540-623324061
Hypothalamic control of energy balance: insights into the role of synaptic plasticity.Dietrich, Marcelo O; Horvath, Tamas LTrends in neurosciences2013 Feb65-7323318157
Synthesis of Ag nanocubes 18-32 nm in edge length: the effects of polyol on reduction kinetics, size control, and reproducibility.Wang, Yi; Zheng, Yiqun; Huang, Cheng Zhi; Xia, YounanJournal of the American Chemical Society2013 Feb 61941-5123317148
Timothy syndrome is associated with activity-dependent dendritic retraction in rodent and human neurons.Krey, Jocelyn F; Pasca, Sergiu P; Shcheglovitov, Aleksandr; Yazawa, Masayuki; Schwemberger, Rachel; Rasmusson, Randall; Dolmetsch, Ricardo ENature neuroscience2013 Feb201-923313911
Pleiotropic actions of insulin resistance and inflammation in metabolic homeostasis.Odegaard, Justin I; Chawla, AjayScience (New York, N.Y.)2013 Jan 11172-723307735
Accelerated high-yield generation of limb-innervating motor neurons from human stem cells.Amoroso, Mackenzie W; Croft, Gist F; Williams, Damian J; O'Keeffe, Sean; Carrasco, Monica A; Davis, Anne R; Roybon, Laurent; Oakley, Derek H; Maniatis, Tom; Henderson, Christopher E; Wichterle, HynekThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Jan 9574-8623303937
Restoration of the gut microbial habitat as a disease therapy.Relman, David ANature biotechnology.2013 Jan;35-723302933
Single-cell and population NF-ýýB dynamic responses depend on lipopolysaccharide preparation.Gutschow, Miriam V; Hughey, Jacob J; Ruggero, Nicholas A; Bajar, Bryce T; Valle, Sean D; Covert, Markus WPloS one2013e5322223301045
Modeling Timothy syndrome with iPS cells.Yazawa, Masayuki; Dolmetsch, Ricardo EJournal of cardiovascular translational research2013 Feb1-923299782
Function of Piwi, a nuclear Piwi/Argonaute protein, is independent of its slicer activity.Darricarrere, Nicole; Liu, Na; Watanabe, Toshiaki; Lin, HaifanProceedings of the National Academy of Sciences of the United States of America2013 Jan 221297-30223297219
Endothelial barrier disruption and recovery is controlled by substrate stiffness.Birukova, Anna A; Tian, Xinyong; Cokic, Ivan; Beckham, Yvonne; Gardel, Margaret L; Birukov, Konstantin GMicrovascular research2013 May50-723296034
Deconvolving the roles of Wnt ligands and receptors in sensing and amplification.Tan, Rui Zhen; Ji, Ni; Mentink, Remco A; Korswagen, Hendrik C; van Oudenaarden, AlexanderMolecular systems biology2013 Jan 863123295860
The hundred-year emotion war: are emotions natural kinds or psychological constructions? Comment on Lench, Flores, and Bench (2011).Lindquist, Kristen A; Siegel, Erika H; Quigley, Karen S; Barrett, Lisa FeldmanPsychological bulletin2013 Jan255-6323294094
Potentiating antibacterial activity by predictably enhancing endogenous microbial ROS production.Brynildsen, Mark P; Winkler, Jonathan A; Spina, Catherine S; MacDonald, I Cody; Collins, James JNature biotechnology2013 Feb160-523292609
Multiplex genome engineering using CRISPR/Cas systems.Cong, Le; Ran, F Ann; Cox, David; Lin, Shuailiang; Barretto, Robert; Habib, Naomi; Hsu, Patrick D; Wu, Xuebing; Jiang, Wenyan; Marraffini, Luciano A; Zhang, FengScience (New York, N.Y.)2013 Feb 15819-2323287718
Design and synthesis of diverse functional kinked nanowire structures for nanoelectronic bioprobes.Xu, Lin; Jiang, Zhe; Qing, Quan; Mai, Liqiang; Zhang, Qingjie; Lieber, Charles MNano letters2013 Feb 13746-5123273386
Listeria monocytogenes infection causes metabolic shifts in Drosophila melanogaster.Chambers, Moria C; Song, Kyung Han; Schneider, David SPloS one2012e5067923272066
How the fly balances its ability to combat different pathogens.Chambers, Moria C; Lightfield, Karla L; Schneider, David SPLoS pathogens2012e100297023271964
Tuning promoter strength through RNA polymerase binding site design in Escherichia coli.Brewster, Robert C; Jones, Daniel L; Phillips, RobPLoS computational biology2012e100281123271961
Spatial clusters of autism births and diagnoses point to contextual drivers ofýýincreased prevalence.Mazumdar, Soumya; Winter, Alix; Liu, Ka-Yuet; Bearman, PeterSocial science & medicine (1982)2012 Dec 823267775
A versatile genome-scale PCR-based pipeline for high-definition DNA FISH.Bienko, Magda; Crosetto, Nicola; Teytelman, Leonid; Klemm, Sandy; Itzkovitz, Shalev; van Oudenaarden, AlexanderNature methods2013 Feb122-423263692
NMDA receptor regulation prevents regression of visual cortical function in the absence of Mecp2.Durand, Severine; Patrizi, Annarita; Quast, Kathleen B; Hachigian, Lea; Pavlyuk, Roman; Saxena, Alka; Carninci, Piero; Hensch, Takao K; Fagiolini, MichelaNeuron2012 Dec 201078-9023259945
Shining light on nuclear-targeted therapy using gold nanostar constructs.Dam, Duncan Hieu M; Culver, Kayla S B; Sisco, Patrick N; Odom, Teri WTherapeutic delivery2012 Nov1263-723259247
Discovery of potent myeloid cell leukemia 1 (Mcl-1) inhibitors using fragment-based methods and structure-based design.Friberg, Anders; Vigil, Dominico; Zhao, Bin; Daniels, R Nathan; Burke, Jason P; Garcia-Barrantes, Pedro M; Camper, DeMarco; Chauder, Brian A; Lee, Taekyu; Olejniczak, Edward T; Fesik, Stephen WJournal of medicinal chemistry2013 Jan 1015-3023244564
Probing enzymatic activity inside living cells using a nanowire-cell "sandwich" assay.Na, Yu-Ran; Kim, So Yeon; Gaublomme, Jellert T; Shalek, Alex K; Jorgolli, Marsela; Park, Hongkun; Yang, Eun GyeongNano letters2013 Jan 9153-823244056
Antimicrobial Efflux Pumps and Mycobacterium Tuberculosis Drug Tolerance: Evolutionary Considerations.Szumowski, John D; Adams, Kristin N; Edelstein, Paul H; Ramakrishnan, LalitaCurrent topics in microbiology and immunology2012 Dec 16NULL23242857
The smallest stroke: occlusion of one penetrating vessel leads to infarction and a cognitive deficit.Shih, Andy Y; Blinder, Pablo; Tsai, Philbert S; Friedman, Beth; Stanley, Geoffrey; Lyden, Patrick D; Kleinfeld, DavidNature neuroscience2013 Jan55-6323242312
Versatile design and synthesis platform for visualizing genomes with Oligopaint FISH probes.Beliveau, Brian J; Joyce, Eric F; Apostolopoulos, Nicholas; Yilmaz, Feyza; Fonseka, Chamith Y; McCole, Ruth B; Chang, Yiming; Li, Jin Billy; Senaratne, Tharanga Niroshini; Williams, Benjamin R; Rouillard, Jean-Marie; Wu, Chao-tingProceedings of the National Academy of Sciences of the United States of America2012 Dec 2621301-623236188
The relation between valence and arousal in subjective experience.Kuppens, Peter; Tuerlinckx, Francis; Russell, James A; Barrett, Lisa FeldmanPsychological bulletin2013 Jul917-4023231533
Quantitative analysis of the fate of gold nanocages in vitro and in vivo after uptake by U87-MG tumor cells.Cho, Eun Chul; Zhang, Yu; Cai, Xin; Moran, Christine M; Wang, Lihong V; Xia, YounanAngewandte Chemie (International ed. in English)2013 Jan 211152-523225223
Identity and function of a large gene network underlying mutagenic repair of DNA breaks.Al Mamun, Abu Amar M; Lombardo, Mary-Jane; Shee, Chandan; Lisewski, Andreas M; Gonzalez, Caleb; Lin, Dongxu; Nehring, Ralf B; Saint-Ruf, Claude; Gibson, Janet L; Frisch, Ryan L; Lichtarge, Olivier; Hastings, P J; Rosenberg, Susan MScience (New York, N.Y.)2012 Dec 71344-823224554
Glutamate receptor 1 phosphorylation at serine 831 and 845 modulates seizure susceptibility and hippocampal hyperexcitability after early life seizures.Rakhade, Sanjay N; Fitzgerald, Erin F; Klein, Peter M; Zhou, Chengwen; Sun, Hongyu; Huganir, Richard L; Hunganir, Richard L; Jensen, Frances EThe Journal of neuroscience : the official journal of the Society for Neuroscience2012 Dec 517800-1223223299
A marriage made to last in drug design.Dietrich, Marcelo O; Horvath, Tamas LNature medicine2012 Dec1737-823223057
Activation of D1 dopamine receptors induces emergence from isoflurane general anesthesia.Taylor, Norman E; Chemali, Jessica J; Brown, Emery N; Solt, KenAnesthesiology2013 Jan30-923221866
Optimal operating points of oscillators using nonlinear resonators.Kenig, Eyal; Cross, M C; Villanueva, L G; Karabalin, R B; Matheny, M H; Lifshitz, Ron; Roukes, M LPhysical review. E, Statistical, nonlinear, and soft matter physics2012 Nov5620723214857
Localizer: fast, accurate, open-source, and modular software package for superresolution microscopy.Dedecker, Peter; Duwe, Sam; Neely, Robert K; Zhang, JinJournal of biomedical optics2012 Dec12600823208219
Assessing the effects of pharmacological agents on respiratory dynamics using time-series modeling.Wong, Kin Foon Kevin; Gong, Jen J; Cotten, Joseph F; Solt, Ken; Brown, Emery NIEEE transactions on bio-medical engineering2013 Apr1118-2523193230
Nanowire-mediated delivery enables functional interrogation of primary immune cells: application to the analysis of chronic lymphocytic leukemia.Shalek, Alex K; Gaublomme, Jellert T; Wang, Lili; Yosef, Nir; Chevrier, Nicolas; Andersen, Mette S; Robinson, Jacob T; Pochet, Nathalie; Neuberg, Donna; Gertner, Rona S; Amit, Ido; Brown, Jennifer R; Hacohen, Nir; Regev, Aviv; Wu, Catherine J; Park, HongkNano letters2012 Dec 126498-50423190424
Understanding the TXA seizure connection.Schwinn, Debra A; Mackensen, G Burkhard; Brown, Emery NThe Journal of clinical investigation2012 Dec 34339-4123187134
Disordered Protein Diffusion under Crowded Conditions.Wang, Yaqiang; Benton, Laura A; Singh, Vishavpreet; Pielak, Gary JThe journal of physical chemistry letters2012 Sep 202703-270623185649
Electrospun nanofibers for regenerative medicine.Liu, Wenying; Thomopoulos, Stavros; Xia, YounanAdvanced healthcare materials2012 Jan 1110-2523184683
Single-cell analysis of ribonucleotide reductase transcriptional and translational response to DNA damage.Mazumder, Aprotim; Tummler, Katja; Bathe, Mark; Samson, Leona DMolecular and cellular biology2013 Feb635-4223184665
Neovascularization in biodegradable inverse opal scaffolds with uniform and precisely controlled pore sizes.Choi, Sung-Wook; Zhang, Yu; Macewan, Matthew R; Xia, YounanAdvanced healthcare materials2013 Jan145-5423184495
Phosphoribosomes for fingerprinting neurons.Dietrich, Marcelo O; Horvath, Tamas LCell2012 Nov 21934-623178116
Proprioceptive coupling within motor neurons drives C. elegans forward locomotion.Wen, Quan; Po, Michelle D; Hulme, Elizabeth; Chen, Sway; Liu, Xinyu; Kwok, Sen Wai; Gershow, Marc; Leifer, Andrew M; Butler, Victoria; Fang-Yen, Christopher; Kawano, Taizo; Schafer, William R; Whitesides, George; Wyart, Matthieu; Chklovskii, Dmitri B; ZheNeuron2012 Nov 21750-6123177960
WholeCellKB: model organism databases for comprehensive whole-cell models.Karr, Jonathan R; Sanghvi, Jayodita C; Macklin, Derek N; Arora, Abhishek; Covert, Markus WNucleic acids research2013 JanD787-9223175606
TALENs: a widely applicable technology for targeted genome editing.Joung, J Keith; Sander, Jeffry DNature reviews. Molecular cell biology2013 Jan49-5523169466
Therapeutic helminth infection of macaques with idiopathic chronic diarrhea alters the inflammatory signature and mucosal microbiota of the colon.Broadhurst, Mara Jana; Ardeshir, Amir; Kanwar, Bittoo; Mirpuri, Julie; Gundra, Uma Mahesh; Leung, Jacqueline M; Wiens, Kirsten E; Vujkovic-Cvijin, Ivan; Kim, Charlie C; Yarovinsky, Felix; Lerche, Nicholas W; McCune, Joseph M; Loke, P'ngPLoS pathogens2012e100300023166490
Generating extracellular amyloid aggregates using E. coli cells.Sivanathan, Viknesh; Hochschild, AnnGenes & development2012 Dec 12659-6723166018
The tower of Babel: survey on concepts and terminology in electrical status epilepticus in sleep and continuous spikes and waves during sleep in North America.Fernandez, Ivan Sanchez; Chapman, Kevin E; Peters, Jurriaan M; Kothare, Sanjeev V; Nordli Jr, Douglas R; Jensen, Frances E; Berg, Anne T; Loddenkemper, TobiasEpilepsia.2013 Apr;741-5023163318
A high-performance neural prosthesis enabled by control algorithm design.Gilja, Vikash; Nuyujukian, Paul; Chestek, Cindy A; Cunningham, John P; Yu, Byron M; Fan, Joline M; Churchland, Mark M; Kaufman, Matthew T; Kao, Jonathan C; Ryu, Stephen I; Shenoy, Krishna VNature neuroscience2012 Dec1752-723160043
Requirements for contractility in disordered cytoskeletal bundles.Lenz, Martin; Gardel, Margaret L; Dinner, Aaron RNew journal of physics2012 Mar 123155355
Leptin and insulin pathways in POMC and AgRP neurons that modulate energy balance and glucose homeostasis.Varela, Luis; Horvath, Tamas LEMBO reports2012 Dec1079-8623146889
Neural population partitioning and a concurrent brain-machine interface for sequential motor function.Shanechi, Maryam M; Hu, Rollin C; Powers, Marissa; Wornell, Gregory W; Brown, Emery N; Williams, Ziv MNature neuroscience2012 Dec1715-2223143511
Capturing the cloud: UAP56 in nuage assembly and function.Lin, HaifanCell2012 Nov 9699-70123141532
Antiepileptic effects of levetiracetam in a rodent neonatal seizure model.Talos, Delia M; Chang, Meayoung; Kosaras, Bela; Fitzgerald, Erin; Murphy, Andrew; Folkerth, Rebecca Dunn; Jensen, Frances EPediatric research2013 Jan24-3023138400
Multiplexed visualization of dynamic signaling networks using genetically encoded fluorescent protein-based biosensors.Depry, Charlene; Mehta, Sohum; Zhang, JinPflugers Archiv : European journal of physiology2013 Mar373-8123138230
Identification and treatment of heme depletion attributed to overexpression of a lineage of evolved P450 monooxygenases.Michener, Joshua K; Nielsen, Jens; Smolke, Christina DProceedings of the National Academy of Sciences of the United States of America2012 Nov 2019504-923129650
Elk-1 phosphorylated at threonine-417 is present in diverse cancers and correlates with differentiation grade of colonic adenocarcinoma.Morris, Jacqueline F; Sul, Jai-Yoon; Kim, Min-Sun; Klein-Szanto, Andres J; Schochet, Terri; Rustgi, Anil; Eberwine, James HHuman pathology.2013 May;766-7623114923
Neuron-to-neuron transmission of ýý-synuclein fibrils through axonal transport.Freundt, Eric C; Maynard, Nate; Clancy, Eileen K; Roy, Shyamali; Bousset, Luc; Sourigues, Yannick; Covert, Markus; Melki, Ronald; Kirkegaard, Karla; Brahic, MichelAnnals of neurology2012 Oct517-2423109146
Recent Developments in Shape-Controlled Synthesis of Silver Nanocrystals.Xia, Xiaohu; Zeng, Jie; Zhang, Qiang; Moran, Christine H; Xia, YounanThe journal of physical chemistry. C, Nanomaterials and interfaces201221647-2165623105955
Determining host metabolic limitations on viral replication via integrated modeling and experimental perturbation.Birch, Elsa W; Ruggero, Nicholas A; Covert, Markus WPLoS computational biology2012e100274623093930
Affective value and associative processing share a cortical substrate.Shenhav, Amitai; Barrett, Lisa Feldman; Bar, MosheCognitive, affective & behavioral neuroscience2013 Mar46-5923090717
A functional selection model explains evolutionary robustness despite plasticity in regulatory networks.Habib, Naomi; Wapinski, Ilan; Margalit, Hanah; Regev, Aviv; Friedman, NirMolecular systems biology.2012;61923089682
Cell-based measures of viral persistence are associated with immune activation and programmed cell death protein 1 (PD-1)-expressing CD4+ T cells.Hatano, Hiroyu; Jain, Vivek; Hunt, Peter W; Lee, Tzong-Hae; Sinclair, Elizabeth; Do, Tri D; Hoh, Rebecca; Martin, Jeffrey N; McCune, Joseph M; Hecht, Frederick; Busch, Michael P; Deeks, Steven GThe Journal of infectious diseases2013 Jul50-623089590
Genome-wide identification and quantitative analysis of cleaved tRNA fragments induced by cellular stress.Saikia, Mridusmita; Krokowski, Dawid; Guan, Bo-Jhih; Ivanov, Pavel; Parisien, Marc; Hu, Guo-fu; Anderson, Paul; Pan, Tao; Hatzoglou, MariaThe Journal of biological chemistry2012 Dec 1442708-2523086926
Engineered ascorbate peroxidase as a genetically encoded reporter for electron microscopy.Martell, Jeffrey D; Deerinck, Thomas J; Sancak, Yasemin; Poulos, Thomas L; Mootha, Vamsi K; Sosinsky, Gina E; Ellisman, Mark H; Ting, Alice YNature biotechnology2012 Nov1143-823086203
AgRP neurons: a switch between peripheral carbohydrate and lipid utilization.Varela, Luis; Horvath, Tamas LThe EMBO journal2012 Nov 144252-423085989
Insights into tuberculosis from the zebrafish model.Berg, Russell D; Ramakrishnan, LalitaTrends in molecular medicine2012 Dec689-9023084762
Transcriptional silencing by single-stranded RNAs targeting a noncoding RNA that overlaps a gene promoter.Matsui, Masayuki; Prakash, Thazha P; Corey, David RACS chemical biology2013 Jan 18122-623082936
Oligodendrocyte regeneration after neonatal hypoxia requires FoxO1-mediated p27Kip1 expression.Jablonska, Beata; Scafidi, Joseph; Aguirre, Adan; Vaccarino, Flora; Nguyen, Vien; Borok, Erzsebet; Horvath, Tamas L; Rowitch, David H; Gallo, VittorioThe Journal of neuroscience : the official journal of the Society for Neuroscience2012 Oct 1714775-9323077062
Intrinsic amygdala-cortical functional connectivity predicts social network size in humans.Bickart, Kevin C; Hollenbeck, Mark C; Barrett, Lisa Feldman; Dickerson, Bradford CThe Journal of neuroscience : the official journal of the Society for Neuroscience2012 Oct 1714729-4123077058
A bioreducible polymer for efficient delivery of Fas-silencing siRNA into stem cell spheroids and enhanced therapeutic angiogenesis.Shim, Min Suk; Bhang, Suk Ho; Yoon, Kyunghwan; Choi, Kyunghee; Xia, YounanAngewandte Chemie (International ed. in English)2012 Nov 1911899-90323074025
The genetic prehistory of southern Africa.Pickrell, Joseph K; Patterson, Nick; Barbieri, Chiara; Berthold, Falko; Gerlach, Linda; Guldemann, Tom; Kure, Blesswell; Mpoloka, Sununguko Wata; Nakagawa, Hirosi; Naumann, Christfried; Lipson, Mark; Loh, Po-Ru; Lachance, Joseph; Mountain, Joanna; BustamaNature communications2012114323072811
Identification and characterization of the chaetoviridin and chaetomugilin gene cluster in Chaetomium globosum reveal dual functions of an iterative highly-reducing polyketide synthase.Winter, Jaclyn M; Sato, Michio; Sugimoto, Satoru; Chiou, Grace; Garg, Neil K; Tang, Yi; Watanabe, KenjiJournal of the American Chemical Society2012 Oct 3117900-323072467
Controlling enzymatic action in living cells with a kinase-inducible bimolecular switch.Sample, Vedangi; Ni, Qiang; Mehta, Sohum; Inoue, Takanari; Zhang, JinACS chemical biology2013 Jan 18116-2123072367
Leptin regulates glutamate and glucose transporters in hypothalamic astrocytes.Fuente-Martin, Esther; Garcia-Caceres, Cristina; Granado, Miriam; de Ceballos, Maria L; Sanchez-Garrido, Miguel Angel; Sarman, Beatrix; Liu, Zhong-Wu; Dietrich, Marcelo O; Tena-Sempere, Manuel; Argente-Arizon, Pilar; Diaz, Francisca; Argente, Jesus; HorvaThe Journal of clinical investigation2012 Nov 13900-1323064363
Finding a better drug for epilepsy: antiepileptogenesis targets.Kobow, Katja; Auvin, Stephane; Jensen, Frances; Loscher, Wolfgang; Mody, Istvan; Potschka, Heidrun; Prince, David; Sierra, Alejandra; Simonato, Michele; Pitkanen, Asla; Nehlig, Astrid; Rho, Jong MEpilepsia2012 Nov1868-7623061663
Stochastic facilitation of artificial tactile sensation in primates.Medina, Leonel E; Lebedev, Mikhail A; O'Doherty, Joseph E; Nicolelis, Miguel A LThe Journal of neuroscience : the official journal of the Society for Neuroscience2012 Oct 1014271-523055496
High-performance binary protein interaction screening in a microfluidic format.Meier, Matthias; Sit, Rene; Pan, Wenying; Quake, Stephen RAnalytical chemistry2012 Nov 69572-823051662
Regulation of a viral proteinase by a peptide and DNA in one-dimensional space: IV. viral proteinase slides along DNA to locate and process its substrates.Blainey, Paul C; Graziano, Vito; Perez-Berna, Ana J; McGrath, William J; Flint, S Jane; San Martin, Carmen; Xie, X Sunney; Mangel, Walter FThe Journal of biological chemistry2013 Jan 182092-10223043138
Regulation of a viral proteinase by a peptide and DNA in one-dimensional space: II. adenovirus proteinase is activated in an unusual one-dimensional biochemical reaction.Graziano, Vito; Luo, Guobin; Blainey, Paul C; Perez-Berna, Ana J; McGrath, William J; Flint, S Jane; San Martin, Carmen; Xie, X Sunney; Mangel, Walter FThe Journal of biological chemistry2013 Jan 182068-8023043137
Regulation of a viral proteinase by a peptide and DNA in one-dimensional space: I. binding to DNA AND to hexon of the precursor to protein VI, pVI, of human adenovirus.Graziano, Vito; McGrath, William J; Suomalainen, Maarit; Greber, Urs F; Freimuth, Paul; Blainey, Paul C; Luo, Guobin; Xie, X Sunney; Mangel, Walter FThe Journal of biological chemistry2013 Jan 182059-6723043136
Iterative plug-and-play methodology for constructing and modifying synthetic gene networks.Litcofsky, Kevin D; Afeyan, Raffi B; Krom, Russell J; Khalil, Ahmad S; Collins, James JNature methods2012 Nov1077-8023042452
Two mechanisms produce mutation hotspots at DNA breaks in Escherichia coli.Shee, Chandan; Gibson, Janet L; Rosenberg, Susan MCell reports2012 Oct 25714-2123041320
A functional architecture of the human brain: emerging insights from the science of emotion.Lindquist, Kristen A; Barrett, Lisa FeldmanTrends in cognitive sciences2012 Nov533-4023036719
Engineering designer transcription activator-like effector nucleases (TALENs) by REAL or REAL-Fast assembly.Reyon, Deepak; Khayter, Cyd; Regan, Maureen R; Joung, J Keith; Sander, Jeffry DCurrent protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.]2012 OctUnit 12.1523026907
The miRNA Regulation of Stem Cells.Huang, Xiao Albert; Lin, HaifanWiley interdisciplinary reviews. Membrane transport and signaling2012 Jan 183-9523024929
FUS-SMN protein interactions link the motor neuron diseases ALS and SMA.Yamazaki, Tomohiro; Chen, Shi; Yu, Yong; Yan, Biao; Haertlein, Tyler C; Carrasco, Monica A; Tapia, Juan C; Zhai, Bo; Das, Rita; Lalancette-Hebert, Melanie; Sharma, Aarti; Chandran, Siddharthan; Sullivan, Gareth; Nishimura, Agnes Lumi; Shaw, Christopher E;Cell reports2012 Oct 25799-80623022481
Quantitative analysis of the human airway microbial ecology reveals a pervasive signature for cystic fibrosis.Blainey, Paul C; Milla, Carlos E; Cornfield, David N; Quake, Stephen RScience translational medicine2012 Sep 26153ra13023019655
Chimeric TALE recombinases with programmable DNA sequence specificity.Mercer, Andrew C; Gaj, Thomas; Fuller, Roberta P; Barbas 3rd, Carlos FNucleic acids research2012 Nov11163-7223019222
Estimation theoretic measure of resolution for stochastic localization microscopy.Fitzgerald, James E; Lu, Ju; Schnitzer, Mark JPhysical review letters2012 Jul 2704810223006110
Distributed control in a mean-field cortical network model: implications for seizure suppression.Ching, ShiNung; Brown, Emery N; Kramer, Mark APhysical review. E, Statistical, nonlinear, and soft matter physics2012 Aug02192023005798
Passive phase noise cancellation scheme.Kenig, Eyal; Cross, M C; Lifshitz, Ron; Karabalin, R B; Villanueva, L G; Matheny, M H; Roukes, M LPhysical review letters2012 Jun 2926410223004985
Contractile units in disordered actomyosin bundles arise from F-actin buckling.Lenz, Martin; Thoresen, Todd; Gardel, Margaret L; Dinner, Aaron RPhysical review letters.2012 Jun 8;23810723003998
Stress-induced variations in the stiffness of micro- and nanocantilever beams.Karabalin, R B; Villanueva, L G; Matheny, M H; Sader, J E; Roukes, M LPhysical review letters2012 Jun 823610123003973
Controlling interneuron activity in Caenorhabditis elegans to evoke chemotactic behaviour.Kocabas, Askin; Shen, Ching-Han; Guo, Zengcai V; Ramanathan, SharadNature.2012 Oct 11;273-723000898
Identification and characterization of the echinocandin B biosynthetic gene cluster from Emericella rugulosa NRRL 11440.Cacho, Ralph A; Jiang, Wei; Chooi, Yit-Heng; Walsh, Christopher T; Tang, YiJournal of the American Chemical Society2012 Oct 1016781-9022998630
Understanding the relationship between brain gene expression and social behavior: lessons from the honey bee.Zayed, Amro; Robinson, Gene EAnnual review of genetics2012591-61522994354
Inferring evoked brain connectivity through adaptive perturbation.Lepage, Kyle Q; Ching, ShiNung; Kramer, Mark AJournal of computational neuroscience2013 Apr303-1822990598
Reversible switching between epigenetic states in honeybee behavioral subcastes.Herb, Brian R; Wolschin, Florian; Hansen, Kasper D; Aryee, Martin J; Langmead, Ben; Irizarry, Rafael; Amdam, Gro V; Feinberg, Andrew PNature neuroscience2012 Oct1371-322983211
Single-cell expression analyses during cellular reprogramming reveal an early stochastic and a late hierarchic phase.Buganim, Yosef; Faddah, Dina A; Cheng, Albert W; Itskovich, Elena; Markoulaki, Styliani; Ganz, Kibibi; Klemm, Sandy L; van Oudenaarden, Alexander; Jaenisch, RudolfCell2012 Sep 141209-2222980981
Neutrophils exert protection in the early tuberculous granuloma by oxidative killing of mycobacteria phagocytosed from infected macrophages.Yang, Chao-Tsung; Cambier, C J; Davis, J Muse; Hall, Christopher J; Crosier, Philip S; Ramakrishnan, LalitaCell host & microbe2012 Sep 13301-1222980327
Acoustic radiation force for vascular cell therapy: inýývitroýývalidation.Kaya, Mehmet; Toma, Catalin; Wang, Jianjun; Grata, Michelle; Fu, Huili; Villanueva, Flordeliza S; Chen, XucaiUltrasound in medicine & biology2012 Nov1989-9722975034
Self-assembly of filamentous amelogenin requires calcium and phosphate: from dimers via nanoribbons to fibrils.Martinez-Avila, Olga; Wu, Shenping; Kim, Seung Joong; Cheng, Yifan; Khan, Feroz; Samudrala, Ram; Sali, Andrej; Horst, Jeremy A; Habelitz, StefanBiomacromolecules2012 Nov 123494-50222974364
The enzymatic and metabolic capabilities of early life.Goldman, Aaron David; Baross, John A; Samudrala, RamPloS one2012e3991222970111
Protein-protected Au clusters as a new class of nanoscale biosensor for label-free fluorescence detection of proteases.Wang, Yucai; Wang, Yi; Zhou, Fengbo; Kim, Paul; Xia, YounanSmall (Weinheim an der Bergstrasse, Germany)2012 Dec 213769-7322969016
A chemically programmed antibody is a long-lasting and potent inhibitor of influenza neuraminidase.Hayakawa, Masahiko; Toda, Narihiro; Carrillo, Nancy; Thornburg, Natalie J; Crowe Jr, James E; Barbas 3rd, Carlos FChembiochem : a European journal of chemical biology2012 Oct 152191-522965667
Induction and molecular signature of pathogenic TH17 cells.Lee, Youjin; Awasthi, Amit; Yosef, Nir; Quintana, Francisco J; Xiao, Sheng; Peters, Anneli; Wu, Chuan; Kleinewietfeld, Markus; Kunder, Sharon; Hafler, David A; Sobel, Raymond A; Regev, Aviv; Kuchroo, Vijay KNature immunology2012 Oct991-922961052
Pretreatment of Asian elephant (Elephas maximus) spermatozoa with cholesterol-loaded cyclodextrins and glycerol addition at 4ýýC improves cryosurvival.Kiso, Wendy K; Asano, Atsushi; Travis, Alexander J; Schmitt, Dennis L; Brown, Janine L; Pukazhenthi, Budhan SReproduction, fertility, and development20121134-4222954260
Gross chromosomal rearrangement mediated by DNA replication in stressed cells: evidence from Escherichia coli.Moore, J M; Wimberly, Hallie; Thornton, P C; Rosenberg, Susan M; Hastings, P JAnnals of the New York Academy of Sciences2012 Sep103-922954223
Misacylation of tRNA with methionine in Saccharomyces cerevisiae.Wiltrout, Elizabeth; Goodenbour, Jeffrey M; Frechin, Mathieu; Pan, TaoNucleic acids research2012 Nov 110494-50622941646
A census of human soluble protein complexes.Havugimana, Pierre C; Hart, G Traver; Nepusz, Tamas; Yang, Haixuan; Turinsky, Andrei L; Li, Zhihua; Wang, Peggy I; Boutz, Daniel R; Fong, Vincent; Phanse, Sadhna; Babu, Mohan; Craig, Stephanie A; Hu, Pingzhao; Wan, Cuihong; Vlasblom, James; Dar, Vaqaar-unCell2012 Aug 311068-8122939629
Reductive stress linked to small HSPs, G6PD, and Nrf2 pathways in heart disease.Brewer, Alison C; Mustafi, Soumyajit Banerjee; Murray, Thomas V A; Rajasekaran, Namakkal Soorappan; Benjamin, Ivor JAntioxidants & redox signaling2013 Mar 201114-2722938199
Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization.Sharon, Itai; Morowitz, Michael J; Thomas, Brian C; Costello, Elizabeth K; Relman, David A; Banfield, Jillian FGenome research2013 Jan111-2022936250
Upregulation of retinal dehydrogenase 2 in alternatively activated macrophages during retinoid-dependent type-2 immunity to helminth infection in mice.Broadhurst, Mara J; Leung, Jacqueline M; Lim, K C; Girgis, Natasha M; Gundra, Uma Mahesh; Fallon, Padraic G; Premenko-Lanier, Mary; McKerrow, James H; McCune, Joseph M; Loke, P'ngPLoS pathogens2012e100288322927819
Preclinical evaluation of HIV eradication strategies in the simian immunodeficiency virus-infected rhesus macaque: a pilot study testing inhibition of indoleamine 2,3-dioxygenase.Dunham, Richard M; Gordon, Shari N; Vaccari, Monica; Piatak, Michael; Huang, Yong; Deeks, Steven G; Lifson, Jeffrey; Franchini, Genoveffa; McCune, Joseph MAIDS research and human retroviruses2013 Feb207-1422924680
Transgenerational epigenetic effects of the Apobec1 cytidine deaminase deficiency on testicular germ cell tumor susceptibility and embryonic viability.Nelson, Vicki R; Heaney, Jason D; Tesar, Paul J; Davidson, Nicholas O; Nadeau, Joseph HProceedings of the National Academy of Sciences of the United States of America2012 Oct 9E2766-7322923694
Single-protein nanomechanical mass spectrometry in real time.Hanay, M S; Kelber, S; Naik, A K; Chi, D; Hentz, S; Bullard, E C; Colinet, E; Duraffourg, L; Roukes, M LNature nanotechnology2012 Sep602-822922541
Macroporous nanowire nanoelectronic scaffolds for synthetic tissues.Tian, Bozhi; Liu, Jia; Dvir, Tal; Jin, Lihua; Tsui, Jonathan H; Qing, Quan; Suo, Zhigang; Langer, Robert; Kohane, Daniel S; Lieber, Charles MNature materials2012 Nov986-9422922448
Modulating the strength and threshold of NOTCH oncogenic signals by mir-181a-1/b-1.Fragoso, Rita; Mao, Tin; Wang, Song; Schaffert, Steven; Gong, Xue; Yue, Sibiao; Luong, Richard; Min, Hyeyoung; Yashiro-Ohtani, Yumi; Davis, Mark; Pear, Warren; Chen, Chang-ZhengPLoS genetics2012e100285522916024
Bipolar cell-photoreceptor connectivity in the zebrafish (Danio rerio) retina.Li, Yong N; Tsujimura, Taro; Kawamura, Shoji; Dowling, John EThe Journal of comparative neurology2012 Nov 13786-80222907678
Multicolored stain-free histopathology with coherent Raman imaging.Freudiger, Christian W; Pfannl, Rolf; Orringer, Daniel A; Saar, Brian G; Ji, Minbiao; Zeng, Qing; Ottoboni, Linda; Wei, Ying; Ying, Wei; Waeber, Christian; Sims, John R; De Jager, Philip L; Sagher, Oren; Philbert, Martin A; Xu, Xiaoyin; Kesari, Santosh; XLaboratory investigation; a journal of technical methods and pathology2012 Oct1492-50222906986
UCP2 induced by natural birth regulates neuronal differentiation of the hippocampus and related adult behavior.Simon-Areces, Julia; Dietrich, Marcelo O; Hermes, Gretchen; Garcia-Segura, Luis Miguel; Arevalo, Maria-Angeles; Horvath, Tamas LPloS one2012e4291122905184
Mouse ooplasm confers context-specific reprogramming capacity.Chan, Michelle M; Smith, Zachary D; Egli, Dieter; Regev, Aviv; Meissner, AlexanderNature genetics2012 Sep978-8022902786
Cyclization of fungal nonribosomal peptides by a terminal condensation-like domain.Gao, Xue; Haynes, Stuart W; Ames, Brian D; Wang, Peng; Vien, Linda P; Walsh, Christopher T; Tang, YiNature chemical biology2012 Oct823-3022902615
Strategic protein target analysis for developing drugs to stop dental caries.Horst, J A; Pieper, U; Sali, A; Zhan, L; Chopra, G; Samudrala, R; Featherstone, J D BAdvances in dental research2012 Sep86-9322899687
A real-time automated point-process method for the detection and correction of erroneous and ectopic heartbeats.Citi, Luca; Brown, Emery N; Barbieri, RiccardoIEEE transactions on bio-medical engineering2012 Oct2828-3722875239
HSPB2 is dispensable for the cardiac hypertrophic response but reduces mitochondrial energetics following pressure overload in mice.Ishiwata, Takahiro; Orosz, Andras; Wang, Xiaohui; Mustafi, Soumyajit Banerjee; Pratt, Gregory W; Christians, Elisabeth S; Boudina, Sihem; Abel, E Dale; Benjamin, Ivor JPloS one2012e4211822870288
A synthetic biology framework for programming eukaryotic transcription functions.Khalil, Ahmad S; Lu, Timothy K; Bashor, Caleb J; Ramirez, Cherie L; Pyenson, Nora C; Joung, J Keith; Collins, James JCell2012 Aug 3647-5822863014
The human microbiome: ecosystem resilience and health.Relman, David ANutrition reviews2012 AugS2-922861804
The disappearing seasonality of autism conceptions in California.Mazumdar, Soumya; Liu, Ka-Yuet; Susser, Ezra; Bearman, PeterPloS one2012e4126522859972
Limitations in anti-obesity drug development: the critical role of hunger-promoting neurons.Dietrich, Marcelo O; Horvath, Tamas LNature reviews. Drug discovery2012 Sep675-9122858652
Vectorization of optically sectioned brain microvasculature: learning aids completion of vascular graphs by connecting gaps and deleting open-ended segments.Kaufhold, John P; Tsai, Philbert S; Blinder, Pablo; Kleinfeld, DavidMedical image analysis2012 Aug1241-5822854035
Evolutionary history and adaptation from high-coverage whole-genome sequences of diverse African hunter-gatherers.Lachance, Joseph; Vernot, Benjamin; Elbers, Clara C; Ferwerda, Bart; Froment, Alain; Bodo, Jean-Marie; Lema, Godfrey; Fu, Wenqing; Nyambo, Thomas B; Rebbeck, Timothy R; Zhang, Kun; Akey, Joshua M; Tishkoff, Sarah ACell2012 Aug 3457-6922840920
An in vivo platform for rapid high-throughput antitubercular drug discovery.Takaki, Kevin; Cosma, Christine L; Troll, Mark A; Ramakrishnan, LalitaCell reports2012 Jul 26175-8422840407
Operator sequence alters gene expression independently of transcription factor occupancy in bacteria.Garcia, Hernan G; Sanchez, Alvaro; Boedicker, James Q; Osborne, Melisa; Gelles, Jeff; Kondev, Jane; Phillips, RobCell reports2012 Jul 26150-6122840405
Investigation of neovascularization in three-dimensional porous scaffolds in vivo by a combination of multiscale photoacoustic microscopy and optical coherence tomography.Cai, Xin; Zhang, Yu; Li, Li; Choi, Sung-Wook; MacEwan, Matthew R; Yao, Junjie; Kim, Chulhong; Xia, Younan; Wang, Lihong VTissue engineering. Part C, Methods2013 Mar196-20422838500
Comprehensive interrogation of natural TALE DNA-binding modules and transcriptional repressor domains.Cong, Le; Zhou, Ruhong; Kuo, Yu-Chi; Cunniff, Margaret; Zhang, FengNature communications201296822828628
What sperm can teach us about energy production.Mukai, C; Travis, A JReproduction in domestic animals = Zuchthygiene2012 Aug164-922827366
Reprogramming movements: extraction of motor intentions from cortical ensemble activity when movement goals change.Ifft, Peter J; Lebedev, Mikhail A; Nicolelis, Miguel A LFrontiers in neuroengineering20121622826698
A whole-cell computational model predicts phenotype from genotype.Karr, Jonathan R; Sanghvi, Jayodita C; Macklin, Derek N; Gutschow, Miriam V; Jacobs, Jared M; Bolival Jr, Benjamin; Assad-Garcia, Nacyra; Glass, John I; Covert, Markus WCell2012 Jul 20389-40122817898
The dawn of virtual cell biology.Freddolino, Peter L; Tavazoie, SaeedCell2012 Jul 20248-5022817888
Sirtuin 1 and sirtuin 3: physiological modulators of metabolism.Nogueiras, Ruben; Habegger, Kirk M; Chaudhary, Nilika; Finan, Brian; Banks, Alexander S; Dietrich, Marcelo O; Horvath, Tamas L; Sinclair, David A; Pfluger, Paul T; Tschop, Matthias HPhysiological reviews2012 Jul1479-51422811431
Mechanisms of intracellular scaling.Levy, Daniel L; Heald, RebeccaAnnual review of cell and developmental biology2012113-3522804576
Context matters: the illusive simplicity of macaque V1 receptive fields.Haslinger, Robert; Pipa, Gordon; Lima, Bruss; Singer, Wolf; Brown, Emery N; Neuenschwander, SergioPloS one2012e3969922802940
Wisdom of crowds for robust gene network inference.Marbach, Daniel; Costello, James C; Kuffner, Robert; Vega, Nicole M; Prill, Robert J; Camacho, Diogo M; Allison, Kyle R; DREAM5 Consortium; Kellis, Manolis; Collins, James J; Stolovitzky, GustavoNature methods2012 Aug796-80422796662
Authorsýýý response: what are emotions and how are they created in the brain?Lindquist, Kristen A; Wager, Tor D; Bliss-Moreau, Eliza; Kober, Hedy; Barret, Lisa FeldmanThe Behavioral and brain sciences.2012 Jun;172-20222783560
ýý-Arrestin2 mediates the initiation and progression of myeloid leukemia.Fereshteh, Mark; Ito, Takahiro; Kovacs, Jeffrey J; Zhao, Chen; Kwon, Hyog Young; Tornini, Valerie; Konuma, Takaaki; Chen, Minyong; Lefkowitz, Robert J; Reya, TannishthaProceedings of the National Academy of Sciences of the United States of America2012 Jul 3112532-722773819
Otx2 binding to perineuronal nets persistently regulates plasticity in the mature visual cortex.Beurdeley, Marine; Spatazza, Julien; Lee, Henry H C; Sugiyama, Sayaka; Bernard, Clemence; Di Nardo, Ariel A; Hensch, Takao K; Prochiantz, AlainThe Journal of neuroscience : the official journal of the Society for Neuroscience2012 Jul 49429-3722764251
Non-invasive prenatal measurement of the fetal genome.Fan, H Christina; Gu, Wei; Wang, Jianbin; Blumenfeld, Yair J; El-Sayed, Yasser Y; Quake, Stephen RNature2012 Jul 19320-422763444
Modeling human cortical development in vitro using induced pluripotent stem cells.Mariani, Jessica; Simonini, Maria Vittoria; Palejev, Dean; Tomasini, Livia; Coppola, Gianfilippo; Szekely, Anna M; Horvath, Tamas L; Vaccarino, Flora MProceedings of the National Academy of Sciences of the United States of America2012 Jul 3112770-522761314
General principles of single-construct chromosomal gene drive.Marshall, John M; Hay, Bruce AEvolution; international journal of organic evolution2012 Jul2150-6622759292
Targeted gene knockout by direct delivery of zinc-finger nuclease proteins.Gaj, Thomas; Guo, Jing; Kato, Yoshio; Sirk, Shannon J; Barbas 3rd, Carlos FNature methods2012 Aug805-722751204
Structural diversity and African origin of the 17q21.31 inversion polymorphism.Steinberg, Karyn Meltz; Antonacci, Francesca; Sudmant, Peter H; Kidd, Jeffrey M; Campbell, Catarina D; Vives, Laura; Malig, Maika; Scheinfeldt, Laura; Beggs, William; Ibrahim, Muntaser; Lema, Godfrey; Nyambo, Thomas B; Omar, Sabah A; Bodo, Jean-Marie; FroNature genetics2012 Aug872-8022751100
Structural basis for germ-line gene usage of a potent class of antibodies targeting the CD4-binding site of HIV-1 gp120.West Jr, Anthony P; Diskin, Ron; Nussenzweig, Michel C; Bjorkman, Pamela JProceedings of the National Academy of Sciences of the United States of America2012 Jul 24E2083-9022745174
Cementomimetics-constructing a cementum-like biomineralized microlayer via amelogenin-derived peptides.Gungormus, Mustafa; Oren, Ersin E; Horst, Jeremy A; Fong, Hanson; Hnilova, Marketa; Somerman, Martha J; Snead, Malcolm L; Samudrala, Ram; Tamerler, Candan; Sarikaya, MehmetInternational journal of oral science2012 Jun69-7722743342
Minimal requirements for inhibition of MraY by lysis protein E from bacteriophage ýýX174.Tanaka, Shiho; Clemons Jr, William MMolecular microbiology2012 Sep975-8522742425
Hydroxychloroquine is associated with impaired interferon-alpha and tumor necrosis factor-alpha production by plasmacytoid dendritic cells in systemic lupus erythematosus.Sacre, Karim; Criswell, Lindsey A; McCune, Joseph MArthritis research & therapy2012R15522734582
Mapping of visual receptive fields by tomographic reconstruction.Pipa, Gordon; Chen, Zhe; Neuenschwander, Sergio; Lima, Bruss; Brown, Emery NNeural computation2012 Oct2543-7822734491
AgRP neurons regulate development of dopamine neuronal plasticity and nonfood-associated behaviors.Dietrich, Marcelo O; Bober, Jeremy; Ferreira, Jozelia G; Tellez, Luis A; Mineur, Yann S; Souza, Diogo O; Gao, Xiao-Bing; Picciotto, Marina R; Araujo, Ivan; Liu, Zhong-Wu; Horvath, Tamas LNature neuroscience2012 Aug1108-1022729177
A single-molecule Hershey-Chase experiment.Van Valen, David; Wu, David; Chen, Yi-Ju; Tuson, Hannah; Wiggins, Paul; Phillips, RobCurrent biology : CB2012 Jul 241339-4322727695
The brain activity map project and the challenge of functional connectomics.Alivisatos, A Paul; Chun, Miyoung; Church, George M; Greenspan, Ralph J; Roukes, Michael L; Yuste, RafaelNeuron2012 Jun 21970-422726828
Gut immune maturation depends on colonization with a host-specific microbiota.Chung, Hachung; Pamp, Sunje J; Hill, Jonathan A; Surana, Neeraj K; Edelman, Sanna M; Troy, Erin B; Reading, Nicola C; Villablanca, Eduardo J; Wang, Sen; Mora, Jorge R; Umesaki, Yoshinori; Mathis, Diane; Benoist, Christophe; Relman, David A; Kasper, DennisCell2012 Jun 221578-9322726443
Subcortical neuronal ensembles: an analysis of motor task association, tremor, oscillations, and synchrony in human patients.Hanson, Timothy L; Fuller, Andrew M; Lebedev, Mikhail A; Turner, Dennis A; Nicolelis, Miguel A LThe Journal of neuroscience : the official journal of the Society for Neuroscience2012 Jun 208620-3222723703
Neural population dynamics during reaching.Churchland, Mark M; Cunningham, John P; Kaufman, Matthew T; Foster, Justin D; Nuyujukian, Paul; Ryu, Stephen I; Shenoy, Krishna VNature2012 Jul 551-622722855
Sequence dependence of transcription factor-mediated DNA looping.Johnson, Stephanie; Linden, Martin; Phillips, RobNucleic acids research2012 Sep7728-3822718983
Accelerated protein structure comparison using TM-score-GPU.Hung, Ling-Hong; Samudrala, RamBioinformatics (Oxford, England)2012 Aug 152191-222718788
Talbot effect beyond the paraxial limit at optical frequencies.Hua, Yi; Suh, Jae Yong; Zhou, Wei; Huntington, Mark D; Odom, Teri WOptics express2012 Jun 1814284-9122714490
Widely accessible method for superresolution fluorescence imaging of living systems.Dedecker, Peter; Mo, Gary C H; Dertinger, Thomas; Zhang, JinProceedings of the National Academy of Sciences of the United States of America2012 Jul 310909-1422711840
Small heat shock proteins in redox metabolism: implications for cardiovascular diseases.Christians, Elisabeth S; Ishiwata, Takahiro; Benjamin, Ivor JThe international journal of biochemistry & cell biology2012 Oct1632-4522710345
Semiconductor nanowires: A platform for nanoscience and nanotechnology.Lieber, Charles MMRS bulletin / Materials Research Society2011 Dec 11052-106322707850
Design, synthesis, and characterization of novel nanowire structures for photovoltaics and intracellular probes.Tian, Bozhi; Lieber, Charles MPure and applied chemistry. Chimie pure et appliquee2011 Jan 12153-216922707797
The effect of particle size on the biodistribution of low-modulus hydrogel PRINT particles.Merkel, Timothy J; Chen, Kai; Jones, Stephen W; Pandya, Ashish A; Tian, Shaomin; Napier, Mary E; Zamboni, William E; DeDimone, Joseph MJournal of controlled release : official journal of the Controlled Release Society2012 Aug 2037-4422705460
New meta-analysis tools reveal common transcriptional regulatory basis for multiple determinants of behavior.Ament, Seth A; Blatti, Charles A; Alaux, Cedric; Wheeler, Marsha M; Toth, Amy L; Le Conte, Yves; Hunt, Greg J; Guzman-Novoa, Ernesto; Degrandi-Hoffman, Gloria; Uribe-Rubio, Jose Luis; Amdam, Gro V; Page Jr, Robert E; Rodriguez-Zas, Sandra L; Robinson, GenProceedings of the National Academy of Sciences of the United States of America2012 Jun 26E1801-1022691501
Cyclic caged morpholinos: conformationally gated probes of embryonic gene function.Yamazoe, Sayumi; Shestopalov, Ilya A; Provost, Elayne; Leach, Steven D; Chen, James KAngewandte Chemie (International ed. in English)2012 Jul 96908-1122689470
Highly efficient generation of heritable zebrafish gene mutations using homo- and heterodimeric TALENs.Cade, Lindsay; Reyon, Deepak; Hwang, Woong Y; Tsai, Shengdar Q; Patel, Samir; Khayter, Cyd; Joung, J Keith; Sander, Jeffry D; Peterson, Randall T; Yeh, Jing-Ruey JoannaNucleic acids research2012 Sep8001-1022684503
In vivo veritas, in vitro artificia.Matarese, Giuseppe; La Cava, Antonio; Horvath, Tamas LTrends in molecular medicine2012 Aug439-4222682514
FoxO1 target Gpr17 activates AgRP neurons to regulate food intake.Ren, Hongxia; Orozco, Ian J; Su, Ya; Suyama, Shigetomo; Gutierrez-Juarez, Roger; Horvath, Tamas L; Wardlaw, Sharon L; Plum, Leona; Arancio, Ottavio; Accili, DomenicoCell2012 Jun 81314-2622682251
States of mind: emotions, body feelings, and thoughts share distributed neural networks.Oosterwijk, Suzanne; Lindquist, Kristen A; Anderson, Eric; Dautoff, Rebecca; Moriguchi, Yoshiya; Barrett, Lisa FeldmanNeuroImage2012 Sep2110-2822677148
Generation of induced pluripotent stem cells from the prairie vole.Manoli, Devanand S; Subramanyam, Deepa; Carey, Catriona; Sudin, Erik; Van Westerhuyzen, Julie A; Bales, Karen L; Blelloch, Robert; Shah, Nirao MPloS one2012e3811922675440
Microbiota-targeted therapies: an ecological perspective.Lemon, Katherine P; Armitage, Gary C; Relman, David A; Fischbach, Michael AScience translational medicine2012 Jun 6137rv522674555
The application of ecological theory toward an understanding of the human microbiome.Costello, Elizabeth K; Stagaman, Keaton; Dethlefsen, Les; Bohannan, Brendan J M; Relman, David AScience (New York, N.Y.)2012 Jun 81255-6222674335
Specific inactivation of two immunomodulatory SIGLEC genes during human evolution.Wang, Xiaoxia; Mitra, Nivedita; Secundino, Ismael; Banda, Kalyan; Cruz, Pedro; Padler-Karavani, Vered; Verhagen, Andrea; Reid, Chris; Lari, Martina; Rizzi, Ermanno; Balsamo, Carlotta; Corti, Giorgio; De Bellis, Gianluca; Longo, Laura; NISC Comparative SeqProceedings of the National Academy of Sciences of the United States of America2012 Jun 199935-4022665810
Improved somatic mutagenesis in zebrafish using transcription activator-like effector nucleases (TALENs).Moore, Finola E; Reyon, Deepak; Sander, Jeffry D; Martinez, Sarah A; Blackburn, Jessica S; Khayter, Cyd; Ramirez, Cherie L; Joung, J Keith; Langenau, David MPloS one2012e3787722655075
SIV replication in the infected rhesus macaque is limited by the size of the preexisting TH17 cell compartment.Hartigan-O'Connor, Dennis J; Abel, Kristina; Van Rompay, Koen K A; Kanwar, Bittoo; McCune, Joseph MScience translational medicine2012 May 30136ra6922649090
Emotions are real.Barrett, Lisa FeldmanEmotion (Washington, D.C.)2012 Jun413-2922642358
Antibiotic-induced bacterial cell death exhibits physiological and biochemical hallmarks of apoptosis.Dwyer, Daniel J; Camacho, Diogo M; Kohanski, Michael A; Callura, Jarred M; Collins, James JMolecular cell2012 Jun 8561-7222633370
Brain-wide neuronal dynamics during motor adaptation in zebrafish.Ahrens, Misha B; Li, Jennifer M; Orger, Michael B; Robson, Drew N; Schier, Alexander F; Engert, Florian; Portugues, RubenNature2012 May 24471-722622571
The brain basis of emotion: a meta-analytic review.Lindquist, Kristen A; Wager, Tor D; Kober, Hedy; Bliss-Moreau, Eliza; Barrett, Lisa FeldmanThe Behavioral and brain sciences2012 Jun121-4322617651
Effect of aspect ratio and deformability on nanoparticle extravasation through nanopores.Kersey, Farrell R; Merkel, Timothy J; Perry, Jillian L; Napier, Mary E; DeSimone, Joseph MLangmuir : the ACS journal of surfaces and colloids2012 Jun 128773-8122612428
Targeting endoglin, an auxiliary transforming growth factor ýý coreceptor, to prevent fibrosis and heart failure.Benjamin, Ivor JCirculation2012 Jun 52689-9122592899
Single cell profiling of circulating tumor cells: transcriptional heterogeneity and diversity from breast cancer cell lines.Powell, Ashley A; Talasaz, Amirali H; Zhang, Haiyu; Coram, Marc A; Reddy, Anupama; Deng, Glenn; Telli, Melinda L; Advani, Ranjana H; Carlson, Robert W; Mollick, Joseph A; Sheth, Shruti; Kurian, Allison W; Ford, James M; Stockdale, Frank E; Quake, Stephen PloS one2012e3378822586443
Outside looking in: nanotube transistor intracellular sensors.Gao, Ruixuan; Strehle, Steffen; Tian, Bozhi; Cohen-Karni, Tzahi; Xie, Ping; Duan, Xiaojie; Qing, Quan; Lieber, Charles MNano letters2012 Jun 133329-3322583370
Trends in ambulatory self-report: the role of momentary experience in psychosomatic medicine.Conner, Tamlin S; Barrett, Lisa FeldmanPsychosomatic medicine2012 May327-3722582330
How cells process information: quantification of spatiotemporal signaling dynamics.Ganesan, Ambhighainath; Zhang, JinProtein science : a publication of the Protein Society2012 Jul918-2822573643
Rendering protein-based particles transiently insoluble for therapeutic applications.Xu, Jing; Wang, Jin; Luft, J Christopher; Tian, Shaomin; Owens Jr, Gary; Pandya, Ashish A; Berglund, Peter; Pohlhaus, Patrick; Maynor, Benjamin W; Smith, Jonathan; Hubby, Bolyn; Napier, Mary E; DeSimone, Joseph MJournal of the American Chemical Society2012 May 308774-722568387
The interaction between early life epilepsy and autistic-like behavioral consequences: a role for the mammalian target of rapamycin (mTOR) pathway.Talos, Delia M; Sun, Hongyu; Zhou, Xiangping; Fitzgerald, Erin C; Jackson, Michele C; Klein, Peter M; Lan, Victor J; Joseph, Annelise; Jensen, Frances EPloS one2012e3588522567115
Discovery of small molecules that bind to K-Ras and inhibit Sos-mediated activation.Sun, Qi; Burke, Jason P; Phan, Jason; Burns, Michael C; Olejniczak, Edward T; Waterson, Alex G; Lee, Taekyu; Rossanese, Olivia W; Fesik, Stephen WAngewandte Chemie (International ed. in English)2012 Jun 186140-322566140
High throughput automated chromatin immunoprecipitation as a platform for drug screening and antibody validation.Wu, Angela R; Kawahara, Tiara L A; Rapicavoli, Nicole A; van Riggelen, Jan; Shroff, Emelyn H; Xu, Liwen; Felsher, Dean W; Chang, Howard Y; Quake, Stephen RLab on a chip2012 Jun 212190-822566096
Beyond homeostasis: a predictive-dynamic framework for understanding cellular behavior.Freddolino, Peter L; Tavazoie, SaeedAnnual review of cell and developmental biology2012363-8422559263
Incorporation and controlled release of silyl ether prodrugs from PRINT nanoparticles.Parrott, Matthew C; Finniss, Mathew; Luft, J Chris; Pandya, Ashish; Gullapalli, Anuradha; Napier, Mary E; DeSimone, Joseph MJournal of the American Chemical Society2012 May 97978-8222545784
Regional differences in susceptibility to hypoxic-ischemic injury in the preterm brain: exploring the spectrum from white matter loss to selective grey matter injury in a rat model.Selip, D B; Jantzie, L L; Chang, M; Jackson, M C; Fitzgerald, E C; Boll, G; Murphy, A; Jensen, F ENeurology research international201272518422530125
Culture environment-induced pluripotency of SACK-expanded tissue stem cells.Pare, Jean-Francois; Sherley, James LJournal of biomedicine & biotechnology201131245722523467
Oxidation of the guanine nucleotide pool underlies cell death by bactericidal antibiotics.Foti, James J; Devadoss, Babho; Winkler, Jonathan A; Collins, James J; Walker, Graham CScience (New York, N.Y.)2012 Apr 20315-922517853
Revisiting the role of the granuloma in tuberculosis.Ramakrishnan, LalitaNature reviews. Immunology2012 May352-6622517424
FoldEco: a model for proteostasis in E. coli.Powers, Evan T; Powers, David L; Gierasch, Lila MCell reports2012 Mar 29265-7622509487
Out of sight but not out of mind: unseen affective faces influence evaluations and social impressions.Anderson, Eric; Siegel, Erika; White, Dominique; Barrett, Lisa FeldmanEmotion (Washington, D.C.)2012 Dec1210-2122506501
Using gene expression noise to understand gene regulation.Munsky, Brian; Neuert, Gregor; van Oudenaarden, AlexanderScience (New York, N.Y.)2012 Apr 13183-722499939
Systematic discovery of structural elements governing stability of mammalian messenger RNAs.Goodarzi, Hani; Najafabadi, Hamed S; Oikonomou, Panos; Greco, Todd M; Fish, Lisa; Salavati, Reza; Cristea, Ileana M; Tavazoie, SaeedNature2012 May 10264-822495308
FLASH assembly of TALENs for high-throughput genome editing.Reyon, Deepak; Tsai, Shengdar Q; Khayter, Cyd; Foden, Jennifer A; Sander, Jeffry D; Joung, J KeithNature biotechnology2012 May460-522484455
Reductively responsive siRNA-conjugated hydrogel nanoparticles for gene silencing.Dunn, Stuart S; Tian, Shaomin; Blake, Steven; Wang, Jin; Galloway, Ashley L; Murphy, Andrew; Pohlhaus, Patrick D; Rolland, Jason P; Napier, Mary E; DeSimone, Joseph MJournal of the American Chemical Society2012 May 27423-3022475061
Six developmental trajectories characterize children with autism.Fountain, Christine; Winter, Alix S; Bearman, Peter SPediatrics2012 Maye1112-2022473372
Synthetically encoded ultrashort-channel nanowire transistors for fast, pointlike cellular signal detection.Cohen-Karni, Tzahi; Casanova, Didier; Cahoon, James F; Qing, Quan; Bell, David C; Lieber, Charles MNano letters2012 May 92639-4422468846
Perspectives on cell reprogramming with RNA.Sul, Jai-Yoon; Kim, Tae Kyung; Lee, Jae Hee; Eberwine, JamesTrends in biotechnology2012 May243-922459515
Eye movements modulate the spatiotemporal dynamics of word processing.Temereanca, Simona; Hamalainen, Matti S; Kuperberg, Gina R; Stufflebeam, Steve M; Halgren, Eric; Brown, Emery NThe Journal of neuroscience : the official journal of the Society for Neuroscience2012 Mar 284482-9422457496
A unique regulatory phase of DNA methylation in the early mammalian embryo.Smith, Zachary D; Chan, Michelle M; Mikkelsen, Tarjei S; Gu, Hongcang; Gnirke, Andreas; Regev, Aviv; Meissner, AlexanderNature2012 Apr 19339-4422456710
A conserved cell growth cycle can account for the environmental stress responses of divergent eukaryotes.Slavov, Nikolai; Airoldi, Edoardo M; van Oudenaarden, Alexander; Botstein, DavidMolecular biology of the cell2012 May1986-9722456505
Genetic switchboard for synthetic biology applications.Callura, Jarred M; Cantor, Charles R; Collins, James JProceedings of the National Academy of Sciences of the United States of America2012 Apr 105850-522454498
Altered inhibition in tuberous sclerosis and type IIb cortical dysplasia.Talos, Delia M; Sun, Hongyu; Kosaras, Bela; Joseph, Annelise; Folkerth, Rebecca D; Poduri, Annapurna; Madsen, Joseph R; Black, Peter M; Jensen, Frances EAnnals of neurology2012 Apr539-5122447678
Active emergence from propofol general anesthesia is induced by methylphenidate.Chemali, Jessica J; Van Dort, Christa J; Brown, Emery N; Solt, KenAnesthesiology2012 May998-100522446983
Entropic tension in crowded membranes.Linden, Martin; Sens, Pierre; Phillips, RobPLoS computational biology2012e100243122438801
Single-cell sequencing provides clues about the host interactions of segmented filamentous bacteria (SFB).Pamp, Sunje J; Harrington, Eoghan D; Quake, Stephen R; Relman, David A; Blainey, Paul CGenome research2012 Jun1107-1922434425
A polished and reinforced thinned-skull window for long-term imaging of the mouse brain.Shih, Andy Y; Mateo, Celine; Drew, Patrick J; Tsai, Philbert S; Kleinfeld, DavidJournal of visualized experiments : JoVE201222433225
Report of the National Heart, Lung, and Blood Institute Working Group on epigenetics and hypertension.Cowley Jr, Allen W; Nadeau, Joseph H; Baccarelli, Andrea; Berecek, Kathleen; Fornage, Myriam; Gibbons, Gary H; Harrison, David G; Liang, Mingyu; Nathanielsz, Peter W; O'Connor, Daniel T; Ordovas, Jose; Peng, Weiqun; Soares, Marcelo Bento; Szyf, Moshe; TolHypertension2012 May899-90522431584
Single-cell census of mechanosensitive channels in living bacteria.Bialecka-Fornal, Maja; Lee, Heun Jin; DeBerg, Hannah A; Gandhi, Chris S; Phillips, RobPloS one2012e3307722427953
A recurrent neural network for closed-loop intracortical brain-machine interface decoders.Sussillo, David; Nuyujukian, Paul; Fan, Joline M; Kao, Jonathan C; Stavisky, Sergey D; Ryu, Stephen; Shenoy, KrishnaJournal of neural engineering2012 Apr02602722427488
Signaling-mediated bacterial persister formation.Vega, Nicole M; Allison, Kyle R; Khalil, Ahmad S; Collins, James JNature chemical biology2012 May431-322426114
Regulated noise in the epigenetic landscape of development and disease.Pujadas, Elisabet; Feinberg, Andrew PCell2012 Mar 161123-3122424224
Direct observation of nanoparticle-cancer cell nucleus interactions.Dam, Duncan Hieu M; Lee, Jung Heon; Sisco, Patrick N; Co, Dick T; Zhang, Ming; Wasielewski, Michael R; Odom, Teri WACS nano2012 Apr 243318-2622424173
DNA methylation dynamics, metabolic fluxes, gene splicing, and alternative phenotypes in honey bees.Foret, Sylvain; Kucharski, Robert; Pellegrini, Matteo; Feng, Suhua; Jacobsen, Steven E; Robinson, Gene E; Maleszka, RyszardProceedings of the National Academy of Sciences of the United States of America2012 Mar 274968-7322416128
State-space analysis of time-varying higher-order spike correlation for multiple neural spike train data.Shimazaki, Hideaki; Amari, Shun-Ichi; Brown, Emery N; Grun, SonjaPLoS computational biology2012e100238522412358
Insights into the regulation of protein abundance from proteomic and transcriptomic analyses.Vogel, Christine; Marcotte, Edward MNature reviews. Genetics2012 Apr227-3222411467
Molecular determinants of scouting behavior in honey bees.Liang, Zhengzheng S; Nguyen, Trang; Mattila, Heather R; Rodriguez-Zas, Sandra L; Seeley, Thomas D; Robinson, Gene EScience (New York, N.Y.)2012 Mar 91225-822403390
Following the fate of one insulin-reactive CD4 T cell: conversion into Teffs and Tregs in the periphery controls diabetes in NOD mice.Fousteri, Georgia; Jasinski, Jean; Dave, Amy; Nakayama, Maki; Pagni, Philippe; Lambolez, Florence; Juntti, Therese; Sarikonda, Ghanashyam; Cheng, Yang; Croft, Michael; Cheroutre, Hilde; Eisenbarth, George; von Herrath, MatthiasDiabetes2012 May1169-7922403296
The BAH domain of ORC1 links H4K20me2 to DNA replication licensing and Meier-Gorlin syndrome.Kuo, Alex J; Song, Jikui; Cheung, Peggie; Ishibe-Murakami, Satoko; Yamazoe, Sayumi; Chen, James K; Patel, Dinshaw J; Gozani, OrNature2012 Apr 5115-922398447
Connecting Type 1 and Type 2 Diabetes through Innate Immunity.Odegaard, Justin I; Chawla, AjayCold Spring Harbor perspectives in medicine2012 Mara00772422393536
A functional variant in FCRL3 is associated with higher Fc receptor-like 3 expression on T cell subsets and rheumatoid arthritis disease activity.Bajpai, Urmila D; Swainson, Louise A; Mold, Jeff E; Graf, Jonathan D; Imboden, John B; McCune, Joseph MArthritis and rheumatism2012 Aug2451-922392608
Interaction of ýý-synuclein and a cell penetrating fusion peptide with higher eukaryotic cell membranes assessed by ýýýýýF NMR.Zigoneanu, Imola G; Pielak, Gary JMolecular pharmaceutics2012 Apr 21024-922376087
Genetic reporter system for positioning of proteins at the bacterial pole.Fixen, Kathryn R; Janakiraman, Anuradha; Garrity, Sean; Slade, Daniel J; Gray, Andrew N; Karahan, Nilay; Hochschild, Ann; Goldberg, Marcia BmBio.2012;22375072
Engineered zinc finger nickases induce homology-directed repair with reduced mutagenic effects.Ramirez, Cherie L; Certo, Michael T; Mussolino, Claudio; Goodwin, Mathew J; Cradick, Thomas J; McCaffrey, Anton P; Cathomen, Toni; Scharenberg, Andrew M; Joung, J KeithNucleic acids research2012 Jul5560-822373919
Blood T-cell receptor diversity decreases during the course of HIV infection, but the potential for a diverse repertoire persists.Baum, Paul D; Young, Jennifer J; Schmidt, Diane; Zhang, Qianjun; Hoh, Rebecca; Busch, Michael; Martin, Jeffrey; Deeks, Steven; McCune, Joseph MBlood2012 Apr 123469-7722371879
Regulation of nuclear PKA revealed by spatiotemporal manipulation of cyclic AMP.Sample, Vedangi; DiPilato, Lisa M; Yang, Jason H; Ni, Qiang; Saucerman, Jeffrey J; Zhang, JinNature chemical biology2012 Apr375-8222366721
Gene delivery to the retina: from mouse to man.Bennett, Jean; Chung, Daniel C; Maguire, AlbertMethods in enzymology2012255-7422365778
Disease tolerance as a defense strategy.Medzhitov, Ruslan; Schneider, David S; Soares, Miguel PScience (New York, N.Y.)2012 Feb 24936-4122363001
Dissociable large-scale networks anchored in the right anterior insula subserve affective experience and attention.Touroutoglou, Alexandra; Hollenbeck, Mark; Dickerson, Bradford C; Feldman Barrett, LisaNeuroImage2012 May 11947-5822361166
MicroRNAs regulate B-cell receptor signaling-induced apoptosis.Kluiver, J L; Chen, C-ZGenes and immunity2012 Apr239-4422357493
Avian intervertebral disc arises from rostral sclerotome and lacks a nucleus pulposus: implications for evolution of the vertebrate disc.Bruggeman, Bradley J; Maier, Jennifer A; Mohiuddin, Yasmin S; Powers, Rae; Lo, Yinting; Guimaraes-Camboa, Nuno; Evans, Sylvia M; Harfe, Brian DDevelopmental dynamics : an official publication of the American Association of Anatomists2012 Apr675-8322354863
Point process time-frequency analysis of dynamic respiratory patterns during meditation practice.Kodituwakku, Sandun; Lazar, Sara W; Indic, Premananda; Chen, Zhe; Brown, Emery N; Barbieri, RiccardoMedical & biological engineering & computing2012 Mar261-7522350435
High-side digitally current controlled biphasic bipolar microstimulator.Hanson, Timothy L; Omarsson, Bjorn; O'Doherty, Joseph E; Peikon, Ian D; Lebedev, Mikhail A; Nicolelis, Miguel A LIEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society2012 May331-4022328184
A neurophysiological-metabolic model for burst suppression.Ching, Shinung; Purdon, Patrick L; Vijayan, Sujith; Kopell, Nancy J; Brown, Emery NProceedings of the National Academy of Sciences of the United States of America2012 Feb 213095-10022323592
A role for cytomegalovirus-specific CD4+CX3CR1+ T cells and cytomegalovirus-induced T-cell immunopathology in HIV-associated atherosclerosis.Sacre, Karim; Hunt, Peter W; Hsue, Priscilla Y; Maidji, Ekaterina; Martin, Jeffrey N; Deeks, Steven G; Autran, Brigitte; McCune, Joseph MAIDS (London, England)2012 Apr 24805-1422313962
Emotion words shape emotion percepts.Gendron, Maria; Lindquist, Kristen A; Barsalou, Lawrence; Barrett, Lisa FeldmanEmotion (Washington, D.C.)2012 Apr314-2522309717
Kinked p-n junction nanowire probes for high spatial resolution sensing and intracellular recording.Jiang, Zhe; Qing, Quan; Xie, Ping; Gao, Ruixuan; Lieber, Charles MNano letters2012 Mar 141711-622309132
Uncovering spatial topology represented by rat hippocampal population neuronal codes.Chen, Zhe; Kloosterman, Fabian; Brown, Emery N; Wilson, Matthew AJournal of computational neuroscience2012 Oct227-5522307459
Loom-sensitive neurons link computation to action in the Drosophila visual Vries, Saskia E J; Clandinin, Thomas RCurrent biology : CB2012 Mar 6353-6222305754
Functional biases in visual cortex neurons with identified projections to higher cortical targets.Jarosiewicz, Beata; Schummers, James; Malik, Wasim Q; Brown, Emery N; Sur, MrigankaCurrent biology : CB2012 Feb 21269-7722305753
Hematopoietic-stem-cell-based gene therapy for HIV disease.Kiem, Hans-Peter; Jerome, Keith R; Deeks, Steven G; McCune, Joseph MCell stem cell2012 Feb 3137-4722305563
Optimality in the development of intestinal crypts.Itzkovitz, Shalev; Blat, Irene C; Jacks, Tyler; Clevers, Hans; van Oudenaarden, AlexanderCell2012 Feb 3608-1922304925
Modular genetic control of sexually dimorphic behaviors.Xu, Xiaohong; Coats, Jennifer K; Yang, Cindy F; Wang, Amy; Ahmed, Osama M; Alvarado, Maricruz; Izumi, Tetsuro; Shah, Nirao MCell2012 Feb 3596-60722304924
Host genotype-specific therapies can optimize the inflammatory response to mycobacterial infections.Tobin, David M; Roca, Francisco J; Oh, Sungwhan F; McFarland, Ross; Vickery, Thad W; Ray, John P; Ko, Dennis C; Zou, Yuxia; Bang, Nguyen D; Chau, Tran T H; Vary, Jay C; Hawn, Thomas R; Dunstan, Sarah J; Farrar, Jeremy J; Thwaites, Guy E; King, Mary-ClaireCell2012 Feb 3434-4622304914
Using a low denaturant model to explore the conformational features of translocation-active SecA.Maki, Jenny L; Krishnan, Beena; Gierasch, Lila MBiochemistry.2012 Feb 21;1369-7922304380
Organization of vomeronasal sensory coding revealed by fast volumetric calcium imaging.Turaga, Diwakar; Holy, Timothy EThe Journal of neuroscience : the official journal of the Society for Neuroscience2012 Feb 11612-2122302803
Competing pathways control host resistance to virus via tRNA modification and programmed ribosomal frameshifting.Maynard, Nathaniel D; Macklin, Derek N; Kirkegaard, Karla; Covert, Markus WMolecular systems biology201256722294093
Two-photon microscopy as a tool to study blood flow and neurovascular coupling in the rodent brain.Shih, Andy Y; Driscoll, Jonathan D; Drew, Patrick J; Nishimura, Nozomi; Schaffer, Chris B; Kleinfeld, DavidJournal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism2012 Jul1277-30922293983
MetaMerge: scaling up genome-scale metabolic reconstructions with application to Mycobacterium tuberculosis.Chindelevitch, Leonid; Stanley, Sarah; Hung, Deborah; Regev, Aviv; Berger, BonnieGenome biology2012r622292986
Spatiotemporal resolution of the Ntla transcriptome in axial mesoderm development.Shestopalov, Ilya A; Pitt, Cameron L W; Chen, James KNature chemical biology2012 Mar270-622286130
Loss of autophagy in pro-opiomelanocortin neurons perturbs axon growth and causes metabolic dysregulation.Coupe, Berengere; Ishii, Yuko; Dietrich, Marcelo O; Komatsu, Masaaki; Horvath, Tamas L; Bouret, Sebastien GCell metabolism2012 Feb 8247-5522285542
A founder mutation in LEPRE1 carried by 1.5% of West Africans and 0.4% of African Americans causes lethal recessive osteogenesis imperfecta.Cabral, Wayne A; Barnes, Aileen M; Adeyemo, Adebowale; Cushing, Kelly; Chitayat, David; Porter, Forbes D; Panny, Susan R; Gulamali-Majid, Fizza; Tishkoff, Sarah A; Rebbeck, Timothy R; Gueye, Serigne M; Bailey-Wilson, Joan E; Brody, Lawrence C; Rotimi, ChaGenetics in medicine : official journal of the American College of Medical Genetics2012 May543-5122281939
Large-scale integration of nanoelectromechanical systems for gas sensing applications.Bargatin, I; Myers, E B; Aldridge, J S; Marcoux, C; Brianceau, P; Duraffourg, L; Colinet, E; Hentz, S; Andreucci, P; Roukes, M LNano letters2012 Mar 141269-7422280452
Cortical correlates of fitts' law.Ifft, Peter J; Lebedev, Mikhail A; Nicolelis, Miguel A LFrontiers in integrative neuroscience20118522275888
Chronic in vivo imaging in the mouse spinal cord using an implanted chamber.Farrar, Matthew J; Bernstein, Ida M; Schlafer, Donald H; Cleland, Thomas A; Fetcho, Joseph R; Schaffer, Chris BNature methods2012 Mar297-30222266542
Engineering nanomedicines using stimuli-responsive biomaterials.Wang, Yapei; Byrne, James D; Napier, Mary E; DeSimone, Joseph MAdvanced drug delivery reviews2012 Aug1021-3022266128
Single-cell analysis reveals that noncoding RNAs contribute to clonal heterogeneity by modulating transcription factor recruitment.Bumgarner, Stacie L; Neuert, Gregor; Voight, Benjamin F; Symbor-Nagrabska, Anna; Grisafi, Paula; van Oudenaarden, Alexander; Fink, Gerald RMolecular cell2012 Feb 24470-8222264825
Instantaneous assessment of autonomic cardiovascular control during general anesthesia.Chen, Zhe; Citi, Luca; Purdon, Patrick L; Brown, Emery N; Barbieri, RiccardoConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20118444-722256307
Robust time-varying multivariate coherence estimation: application to electroencephalogram recordings during general anesthesia.Wong, Kin Foon Kevin; Mukamel, Eran A; Salazar, Andres Felipe; Pierce, Eric T; Harrell, P Grace; Walsh, John L; Sampson, Aaron; Brown, Emery N; Purdon, Patrick LConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20114725-822255393
Bayesian analysis of trinomial data in behavioral experiments and its application to human studies of general anesthesia.Wong, Kin Foon Kevin; Smith, Anne C; Pierce, Eric T; Harrell, P Grace; Walsh, John L; Salazar, Andres Felipe; Tavares, Casie L; Cimenser, Aylin; Prerau, Michael J; Mukamel, Eran A; Sampson, Aaron; Purdon, Patrick L; Brown, Emery NConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20114705-822255388
Assessing neuronal interactions of cell assemblies during general anesthesia.Chen, Zhe; Vijayan, Sujith; Ching, ShiNung; Hale, Greg; Flores, Francisco J; Wilson, Matthew A; Brown, Emery NConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20114175-822255259
Modeling two-photon calcium fluorescence of episodic V1 recordings using multifrequency analysis.Zheng, Henry W; Malik, Wasim Q; Runyan, Caroline A; Sur, Mriganka; Brown, Emery NConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20113016-922254975
Point-process analysis of neural spiking activity of muscle spindles recorded from thin-film longitudinal intrafascicular electrodes.Citi, Luca; Djilas, Milan; Azevedo-Coste, Christine; Yoshida, Ken; Brown, Emery N; Barbieri, RiccardoConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20112311-422254803
Phase-based measures of cross-frequency coupling in brain electrical dynamics under general anesthesia.Mukamel, Eran A; Wong, Kin Foon; Prerau, Michael J; Brown, Emery N; Purdon, Patrick LConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20111981-422254722
Correcting for serial dependence in studies of respiratory dynamics.Gong, Jen J; Wong, Kin Foon Kevin; Cotten, Joseph F; Solt, Ken; Brown, Emery NConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20111721-422254658
A state-space model of the burst suppression ratio.Chemali, Jessica J; Wong, K F Kevin; Solt, Ken; Brown, Emery NConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20111431-422254587
Monkey models for brain-machine interfaces: the need for maintaining diversity.Nuyujukian, Paul; Fan, Joline M; Gilja, Vikash; Kalanithi, Paul S; Chestek, Cindy A; Shenoy, Krishna VConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20111301-522254555
Cohort effects explain the increase in autism diagnosis among children born from 1992 to 2003 in California.Keyes, Katherine M; Susser, Ezra; Cheslack-Postava, Keely; Fountain, Christine; Liu, Kayuet; Bearman, Peter SInternational journal of epidemiology2012 Apr495-50322253308
Affective state influences perception by affecting decision parameters underlying bias and sensitivity.Lynn, Spencer K; Zhang, Xuan; Barrett, Lisa FeldmanEmotion (Washington, D.C.)2012 Aug726-3622251054
What limits the efficiency of double-strand break-dependent stress-induced mutation in Escherichia coli?Shee, Chandan; Ponder, Rebecca; Gibson, Janet L; Rosenberg, Susan MJournal of molecular microbiology and biotechnology20118-1922248539
Controlling airborne cues to study small animal navigation.Gershow, Marc; Berck, Matthew; Mathew, Dennis; Luo, Linjiao; Kane, Elizabeth A; Carlson, John R; Samuel, Aravinthan D TNature methods.2012 Mar;290-622245808
A reliable protocol for the manual segmentation of the human amygdala and its subregions using ultra-high resolution MRI.Entis, Jonathan J; Doerga, Priya; Barrett, Lisa Feldman; Dickerson, Bradford CNeuroImage2012 Apr 21226-3522245260
The Caenorhabditis elegans synthetic multivulva genes prevent ras pathway activation by tightly repressing global ectopic expression of lin-3 EGF.Saffer, Adam M; Kim, Dong Hyun; van Oudenaarden, Alexander; Horvitz, H RobertPLoS genetics2011 Dece100241822242000
Balancing repair and tolerance of DNA damage caused by alkylating agents.Fu, Dragony; Calvo, Jennifer A; Samson, Leona DNature reviews. Cancer2012 Feb104-2022237395
Modifying the pores of an inverse opal scaffold with chitosan microstructures for truly three-dimensional cell culture.Zhang, Yu; Choi, Sung-Wook; Xia, YounanMacromolecular rapid communications2012 Feb 27296-30122231861
Vertical nanowire electrode arrays as a scalable platform for intracellular interfacing to neuronal circuits.Robinson, Jacob T; Jorgolli, Marsela; Shalek, Alex K; Yoon, Myung-Han; Gertner, Rona S; Park, HongkunNature nanotechnology2012 Mar180-422231664
Tolerance of infections.Ayres, Janelle S; Schneider, David SAnnual review of immunology2012271-9422224770
Virtual active touch using randomly patterned intracortical microstimulation.O'Doherty, Joseph E; Lebedev, Mikhail A; Li, Zheng; Nicolelis, Miguel A LIEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society2012 Jan85-9322207642
Quantitative analysis of the role played by poly(vinylpyrrolidone) in seed-mediated growth of Ag nanocrystals.Xia, Xiaohu; Zeng, Jie; Oetjen, L Kyle; Li, Qingge; Xia, YounanJournal of the American Chemical Society2012 Jan 251793-80122206387
Glutathione-dependent reductive stress triggers mitochondrial oxidation and cytotoxicity.Zhang, Huali; Limphong, Pattraranee; Pieper, Joel; Liu, Qiang; Rodesch, Christopher K; Christians, Elisabeth; Benjamin, Ivor JFASEB journal : official publication of the Federation of American Societies for Experimental Biology2012 Apr1442-5122202674
Obesity is associated with hypothalamic injury in rodents and humans.Thaler, Joshua P; Yi, Chun-Xia; Schur, Ellen A; Guyenet, Stephan J; Hwang, Bang H; Dietrich, Marcelo O; Zhao, Xiaolin; Sarruf, David A; Izgur, Vitaly; Maravilla, Kenneth R; Nguyen, Hong T; Fischer, Jonathan D; Matsen, Miles E; Wisse, Brent E; Morton, GregThe Journal of clinical investigation2012 Jan 3153-6222201683
A high-throughput fluorescence polarization anisotropy assay for the 70N domain of replication protein A.Souza-Fagundes, Elaine M; Frank, Andreas O; Feldkamp, Michael D; Dorset, Daniel C; Chazin, Walter J; Rossanese, Olivia W; Olejniczak, Edward T; Fesik, Stephen WAnalytical biochemistry2012 Feb 15742-922197419
Combinatorial patterning of chromatin regulators uncovered by genome-wide location analysis in human cells.Ram, Oren; Goren, Alon; Amit, Ido; Shoresh, Noam; Yosef, Nir; Ernst, Jason; Kellis, Manolis; Gymrek, Melissa; Issner, Robbyn; Coyne, Michael; Durham, Timothy; Zhang, Xiaolan; Donaghey, Julie; Epstein, Charles B; Regev, Aviv; Bernstein, Bradley ECell2011 Dec 231628-3922196736
A high-resolution whole-genome map of key chromatin modifications in the adult Drosophila melanogaster.Yin, Hang; Sweeney, Sarah; Raha, Debasish; Snyder, Michael; Lin, HaifanPLoS genetics2011 Dece100238022194694
CPG15 regulates synapse stability in the developing and adult brain.Fujino, Tadahiro; Leslie, Jennifer H; Eavri, Ronen; Chen, Jerry L; Lin, Walter C; Flanders, Genevieve H; Borok, Erzsebet; Horvath, Tamas L; Nedivi, EllyGenes & development2011 Dec 152674-8522190461
Broad range of neural dynamics from a time-varying FitzHugh-Nagumo model and its spiking threshold estimation.Faghih, Rose T; Savla, Ketan; Dahleh, Munther A; Brown, Emery NIEEE transactions on bio-medical engineering2012 Mar816-2322186931
Accurate proteome-wide protein quantification from high-resolution 15N mass spectra.Khan, Zia; Amini, Sasan; Bloom, Joshua S; Ruse, Cristian; Caudy, Amy A; Kruglyak, Leonid; Singh, Mona; Perlman, David H; Tavazoie, SaeedGenome biology2011R12222182234
An Electrochemical Approach to and the Physical Consequences of Preparing Nanostructures from Gold Nanorods with Smooth Ends.Banholzer, Matthew J; Li, Shuzhou; Ketter, Jacob B; Rozkiewicz, Dorota I; Schatz, George C; Mirkin, Chad AThe journal of physical chemistry. C, Nanomaterials and interfaces.2008 Oct 9;15729-1573422180788
Pyrene-Appended Fluorescent Tweezers Generated via the Weak-Link Approach and Their Halide Recognition Properties.Jeon, You-Moon; Kim, Dongwoo; Mirkin, Chad A; Golen, James A; Rheingold, Arnold LTetrahedron2008 Sep 18428-843422180669
Intracellular recordings of action potentials by an extracellular nanoscale field-effect transistor.Duan, Xiaojie; Gao, Ruixuan; Xie, Ping; Cohen-Karni, Tzahi; Qing, Quan; Choe, Hwan Sung; Tian, Bozhi; Jiang, Xiaocheng; Lieber, Charles MNature nanotechnology2012 Mar174-922179566
Genetic dissection reveals two separate retinal substrates for polarization vision in Drosophila.Wernet, Mathias F; Velez, Mariel M; Clark, Damon A; Baumann-Klausener, Franziska; Brown, Julian R; Klovstad, Martha; Labhart, Thomas; Clandinin, Thomas RCurrent biology : CB2012 Jan 1012-2022177904
Comparisons of distance methods for combining covariates and abundances in microbiome studies.Fukuyama, Julia; McMurdie, Paul J; Dethlefsen, Les; Relman, David A; Holmes, SusanPacific Symposium on Biocomputing. Pacific Symposium on Biocomputing.2012;213-2422174277
Microbial environments confound antibiotic efficacy.Lee, Henry H; Collins, James JNature chemical biology2012 Jan6-922173343
Hypoxia-induced neonatal seizures diminish silent synapses and long-term potentiation in hippocampal CA1 neurons.Zhou, Chengwen; Lippman, Jocelyn J Bell; Sun, Hongyu; Jensen, Frances EThe Journal of neuroscience : the official journal of the Society for Neuroscience2011 Dec 1418211-2222171027
Developmental regulation of group I metabotropic glutamate receptors in the premature brain and their protective role in a rodent model of periventricular leukomalacia.Jantzie, Lauren L; Talos, Delia M; Selip, Debra B; An, Li; Jackson, Michele C; Folkerth, Rebecca D; Deng, Wenbin; Jensen, Frances ENeuron glia biology2010 Nov277-8822169210
Delivery of multiple siRNAs using lipid-coated PLGA nanoparticles for treatment of prostate cancer.Hasan, Warefta; Chu, Kevin; Gullapalli, Anuradha; Dunn, Stuart S; Enlow, Elizabeth M; Luft, J Christopher; Tian, Shaomin; Napier, Mary E; Pohlhaus, Patrick D; Rolland, Jason P; DeSimone, Joseph MNano letters2012 Jan 11287-9222165988
Thymosin beta 4 is dispensable for murine cardiac development and function.Banerjee, Indroneal; Zhang, Jianlin; Moore-Morris, Thomas; Lange, Stephan; Shen, Tao; Dalton, Nancy D; Gu, Yusu; Peterson, Kirk L; Evans, Sylvia M; Chen, JuCirculation research2012 Feb 3456-6422158707
Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome.Pride, David T; Salzman, Julia; Haynes, Matthew; Rohwer, Forest; Davis-Long, Clara; White 3rd, Richard A; Loomer, Peter; Armitage, Gary C; Relman, David AThe ISME journal2012 May915-2622158393
Genomic rearrangement in three dimensions.Hastings, P J; Rosenberg, Susan MNature biotechnology2011 Dec1096-822158363
Local electrical potential detection of DNA by nanowire-nanopore sensors.Xie, Ping; Xiong, Qihua; Fang, Ying; Qing, Quan; Lieber, Charles MNature nanotechnology2012 Feb119-2522157724
Protein kinase C ýý is required for T cell activation and homeostatic proliferation.Fu, Guo; Hu, Jianfang; Niederberger-Magnenat, Nathalie; Rybakin, Vasily; Casas, Javier; Yachi, Pia P; Feldstein, Stephanie; Ma, Bo; Hoerter, John A H; Ampudia, Jeanette; Rigaud, Stephanie; Lambolez, Florence; Gavin, Amanda L; Sauer, Karsten; Cheroutre, HiScience signaling2011ra8422155788
Interaction of *-synuclein with vesicles that mimic mitochondrial membranes.Zigoneanu, Imola G; Yang, Yoo Jeong; Krois, Alexander S; Haque, Emdadul; Pielak, Gary JBiochimica et biophysica acta2012 Mar512-922155643
A spatiotemporal dynamic distributed solution to the MEG inverse problem.Lamus, Camilo; Hamalainen, Matti S; Temereanca, Simona; Brown, Emery N; Purdon, Patrick LNeuroImage2011 Nov 3022155043
Katanin contributes to interspecies spindle length scaling in Xenopus.Loughlin, Rose; Wilbur, Jeremy D; McNally, Francis J; Nedelec, Francois J; Heald, RebeccaCell2011 Dec 91397-40722153081
Extraordinary nonlinear absorption in 3D bowtie nanoantennas.Suh, Jae Yong; Huntington, Mark D; Kim, Chul Hoon; Zhou, Wei; Wasielewski, Michael R; Odom, Teri WNano letters2012 Jan 11269-7422149352
Quantifying the coverage density of poly(ethylene glycol) chains on the surface of gold nanostructures.Xia, Xiaohu; Yang, Miaoxin; Wang, Yucai; Zheng, Yiqun; Li, Qingge; Chen, Jingyi; Xia, YounanACS nano2012 Jan 24512-2222148912
Loop nucleotides control primary and mature miRNA function in target recognition and repression.Yue, Si-Biao; Trujillo, Robin Deis; Tang, Yujie; O'Gorman, William E; Chen, Chang-ZhengRNA biology2011 Nov-Dec1115-2322142974
Evolution of functionally diverse alleles associated with PTC bitter taste sensitivity in Africa.Campbell, Michael C; Ranciaro, Alessia; Froment, Alain; Hirbo, Jibril; Omar, Sabah; Bodo, Jean-Marie; Nyambo, Thomas; Lema, Godfrey; Zinshteyn, Daniel; Drayna, Dennis; Breslin, Paul A S; Tishkoff, Sarah AMolecular biology and evolution2012 Apr1141-5322130969
Haplotype variation and genotype imputation in African populations.Huang, Lucy; Jakobsson, Mattias; Pemberton, Trevor J; Ibrahim, Muntaser; Nyambo, Thomas; Omar, Sabah; Pritchard, Jonathan K; Tishkoff, Sarah A; Rosenberg, Noah AGenetic epidemiology2011 Dec766-8022125220
Transgenerational genetic effects.Nelson, Vicki R; Nadeau, Joseph HEpigenomics2010 Dec797-80622122083
Transgenerational genetic effects of the paternal Y chromosome on daughters' phenotypes.Nelson, Vicki R; Spiezio, Sabrina H; Nadeau, Joseph HEpigenomics.2010 Aug;513-2122121971
Decoding cell lineage from acquired mutations using arbitrary deep sequencing.Carlson, Cheryl A; Kas, Arnold; Kirkwood, Robert; Hays, Laura E; Preston, Bradley D; Salipante, Stephen J; Horwitz, Marshall SNature methods2012 Jan78-8022120468
Using iPSC-derived neurons to uncover cellular phenotypes associated with Timothy syndrome.Pasca, Sergiu P; Portmann, Thomas; Voineagu, Irina; Yazawa, Masayuki; Shcheglovitov, Aleksandr; Pasca, Anca M; Cord, Branden; Palmer, Theo D; Chikahisa, Sachiko; Nishino, Seiji; Bernstein, Jonathan A; Hallmayer, Joachim; Geschwind, Daniel H; Dolmetsch, Ricardo ENature medicine.2011 Dec;1657-6222120178
Single-molecule transcript counting of stem-cell markers in the mouse intestine.Itzkovitz, Shalev; Lyubimova, Anna; Blat, Irene C; Maynard, Mindy; van Es, Johan; Lees, Jacqueline; Jacks, Tyler; Clevers, Hans; van Oudenaarden, AlexanderNature cell biology2012 Jan106-1422119784
SV119-gold nanocage conjugates: a new platform for targeting cancer cells via sigma-2 receptors.Wang, Yucai; Xu, Jinbin; Xia, Xiaohu; Yang, Miaoxin; Vangveravong, Suwanna; Chen, Jingyi; Mach, Robert H; Xia, YounanNanoscale2012 Jan 21421-422113350
Interaction of streptavidin-based peptide-MHC oligomers (tetramers) with cell-surface TCRs.Stone, Jennifer D; Artyomov, Maxim N; Chervin, Adam S; Chakraborty, Arup K; Eisen, Herman N; Kranz, David MJournal of immunology (Baltimore, Md. : 1950).2011 Dec 15;6281-9022102724
Synthesis of monolithic graphene-graphite integrated electronics.Park, Jang-Ung; Nam, SungWoo; Lee, Mi-Sun; Lieber, Charles MNature materials2012 Feb120-522101813
Alternatively activated macrophages produce catecholamines to sustain adaptive thermogenesis.Nguyen, Khoa D; Qiu, Yifu; Cui, Xiaojin; Goh, Y P Sharon; Mwangi, Julia; David, Tovo; Mukundan, Lata; Brombacher, Frank; Locksley, Richard M; Chawla, AjayNature2011 Dec 1104-822101429
Strategies to discover regulatory circuits of the mammalian immune system.Amit, Ido; Regev, Aviv; Hacohen, NirNature reviews. Immunology2011 Dec873-8022094988
Confinement of gene drive systems to local populations: a comparative analysis.Marshall, John M; Hay, Bruce AJournal of theoretical biology2012 Feb 7153-7122094363
Prospect for feedback guided surgery with ultra-short pulsed laser light.Jeong, Diana C; Tsai, Philbert S; Kleinfeld, DavidCurrent opinion in neurobiology2012 Feb24-3322088392
STATE-SPACE SOLUTIONS TO THE DYNAMIC MAGNETOENCEPHALOGRAPHY INVERSE PROBLEM USING HIGH PERFORMANCE COMPUTING.Long, Christopher J; Purdon, Patrick L; Temereanca, Simona; Desai, Neil U; Hamalainen, Matti S; Brown, Emery NThe annals of applied statistics2011 Jun 11207-122822081780
Systematic discovery of TLR signaling components delineates viral-sensing circuits.Chevrier, Nicolas; Mertins, Philipp; Artyomov, Maxim N; Shalek, Alex K; Iannacone, Matteo; Ciaccio, Mark F; Gat-Viks, Irit; Tonti, Elena; DeGrace, Marciela M; Clauser, Karl R; Garber, Manuel; Eisenhaure, Thomas M; Yosef, Nir; Robinson, Jacob; Sutton, Amy;Cell2011 Nov 11853-6722078882
Large-scale automated histology in the pursuit of connectomes.Kleinfeld, David; Bharioke, Arjun; Blinder, Pablo; Bock, Davi D; Briggman, Kevin L; Chklovskii, Dmitri B; Denk, Winfried; Helmstaedter, Moritz; Kaufhold, John P; Lee, Wei-Chung Allen; Meyer, Hanno S; Micheva, Kristina D; Oberlaender, Marcel; Prohaska, SteThe Journal of neuroscience : the official journal of the Society for Neuroscience2011 Nov 916125-3822072665
Mitotic chromosome size scaling in Xenopus.Kieserman, Esther K; Heald, RebeccaCell cycle (Georgetown, Tex.)2011 Nov 153863-7022071695
Zebrafish neurobiology: from development to circuit function and behaviour.Engert, Florian; Wilson, Stephen WDevelopmental neurobiology.2012 Mar;22058058
Sustained axon regeneration induced by co-deletion of PTEN and SOCS3.Sun, Fang; Park, Kevin K; Belin, Stephane; Wang, Dongqing; Lu, Tao; Chen, Gang; Zhang, Kang; Yeung, Cecil; Feng, Guoping; Yankner, Bruce A; He, ZhigangNature2011 Dec 15372-522056987
In vivo quantitative evaluation of the transport kinetics of gold nanocages in a lymphatic system by noninvasive photoacoustic tomography.Cai, Xin; Li, Weiyang; Kim, Chul-Hong; Yuan, Yuchen; Wang, Lihong V; Xia, YounanACS nano2011 Dec 279658-6722054348
Variations in the heme oxygenase-1 microsatellite polymorphism are associated with plasma CD14 and viral load in HIV-infected African-Americans.Seu, L; Burt, T D; Witte, J S; Martin, J N; Deeks, S G; McCune, J MGenes and immunity2012 Apr258-6722048453
Fitness landscape of antibiotic tolerance in Pseudomonas aeruginosa biofilms.Amini, Sasan; Hottes, Alison K; Smith, Lincoln E; Tavazoie, SaeedPLoS pathogens2011 Octe100229822028649
Gold nanocages as contrast agents for photoacoustic imaging.Li, Weiyang; Brown, Paige K; Wang, Lihong V; Xia, YounanContrast media & molecular imaging2011 Sep-Oct370-722025337
Motor cortical networks for skilled movements have dynamic properties that are related to accurate reaching.Putrino, David F; Chen, Zhe; Ghosh, Soumya; Brown, Emery NNeural plasticity201141354322007332
Proteostasis and REDOX state in the heart.Christians, Elisabeth S; Benjamin, Ivor JAmerican journal of physiology. Heart and circulatory physiology2012 Jan 1H24-3722003057
Multiplexed quantification of nucleic acids with large dynamic range using multivolume digital RT-PCR on a rotational SlipChip tested with HIV and hepatitis C viral load.Shen, Feng; Sun, Bing; Kreutz, Jason E; Davydova, Elena K; Du, Wenbin; Reddy, Poluru L; Joseph, Loren J; Ismagilov, Rustem FJournal of the American Chemical Society2011 Nov 917705-1221995644
Characterization of genetic variation and natural selection at the arylamine N-acetyltransferase genes in global human populations.Mortensen, Holly M; Froment, Alain; Lema, Godfrey; Bodo, Jean-Marie; Ibrahim, Muntaser; Nyambo, Thomas B; Omar, Sabah A; Tishkoff, Sarah APharmacogenomics2011 Nov1545-5821995608
Engineering designer nucleases with customized cleavage specificities.Sander, Jeffry D; Maeder, Morgan L; Joung, J KeithCurrent protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.]2011 OctUnit12.1321987054
Macrophage-mediated inflammation in metabolic disease.Chawla, Ajay; Nguyen, Khoa D; Goh, Y P SharonNature reviews. Immunology2011 Nov738-4921984069
Theoretical design and analysis of multivolume digital assays with wide dynamic range validated experimentally with microfluidic digital PCR.Kreutz, Jason E; Munson, Todd; Huynh, Toan; Shen, Feng; Du, Wenbin; Ismagilov, Rustem FAnalytical chemistry2011 Nov 18158-6821981344
Active tactile exploration using a brain-machine-brain interface.O'Doherty, Joseph E; Lebedev, Mikhail A; Ifft, Peter J; Zhuang, Katie Z; Shokur, Solaiman; Bleuler, Hannes; Nicolelis, Miguel A LNature2011 Nov 10228-3121976021
Early postmyocardial infarction survival in Murphy Roths Large mice is mediated by attenuated apoptosis and inflammation but depends on genetic background.Hunt, Darlene L; Campbell, Patrick H; Zambon, Alexander C; Vranizan, Karen; Evans, Sylvia M; Kuo, Hai-Chien; Yamaguchi, Ken D; Omens, Jeffrey H; McCulloch, Andrew DExperimental physiology2012 Jan102-1421967898
Behavior-specific changes in transcriptional modules lead to distinct and predictable neurogenomic states.Chandrasekaran, Sriram; Ament, Seth A; Eddy, James A; Rodriguez-Zas, Sandra L; Schatz, Bruce R; Price, Nathan D; Robinson, Gene EProceedings of the National Academy of Sciences of the United States of America2011 Nov 118020-521960440
Tracing personalized health curves during infections.Schneider, David SPLoS biology.2011 Sep;21957398
Nanowire biosensors for label-free, real-time, ultrasensitive protein detection.Zheng, Gengfeng; Lieber, Charles MMethods in molecular biology (Clifton, N.J.)2011223-3721948419
Exploring weak, transient protein--protein interactions in crowded in vivo environments by in-cell nuclear magnetic resonance spectroscopy.Wang, Qinghua; Zhuravleva, Anastasia; Gierasch, Lila MBiochemistry2011 Nov 19225-3621942871
Uniting germline and stem cells: the function of Piwi proteins and the piRNA pathway in diverse organisms.Juliano, Celina; Wang, Jianquan; Lin, HaifanAnnual review of genetics2011447-6921942366
Abacavir increases platelet reactivity via competitive inhibition of soluble guanylyl cyclase.Baum, Paul D; Sullam, Paul M; Stoddart, Cheryl A; McCune, Joseph MAIDS (London, England)2011 Nov 282243-821941165
Microbiology. Antibiotic resistance, not shaken or stirred.Frisch, Ryan L; Rosenberg, Susan MScience (New York, N.Y.)2011 Sep 231713-421940884
Heterogeneous bacterial persisters and engineering approaches to eliminate them.Allison, Kyle R; Brynildsen, Mark P; Collins, James JCurrent opinion in microbiology2011 Oct593-821937262
Methylphenidate actively induces emergence from general anesthesia.Solt, Ken; Cotten, Joseph F; Cimenser, Aylin; Wong, Kin F K; Chemali, Jessica J; Brown, Emery NAnesthesiology2011 Oct791-80321934407
Stress-induced loss of heterozygosity in Candida: a possible missing link in the ability to evolve.Rosenberg, Susan MmBio201121933916
A Three-Channel Spectrometer for Wide-Field Imaging of Anisotropic Plasmonic Nanoparticles.Sweeney, Christina M; Nehl, Colleen L; Hasan, Warefta; Liang, Taiyang; Eckermann, Amanda; Meade, Thomas J; Odom, Teri WThe journal of physical chemistry. C, Nanomaterials and interfaces2011 Aug 1815933-1593721927639
Spatiotemporal control of embryonic gene expression using caged morpholinos.Shestopalov, Ilya A; Chen, James KMethods in cell biology.2011;151-7221924162
Engineering zinc finger nucleases for targeted mutagenesis of zebrafish.Sander, Jeffry D; Yeh, J-R Joanna; Peterson, Randall T; Joung, J KeithMethods in cell biology201151-821924156
LoCo: a novel main chain scoring function for protein structure prediction based on local coordinates.Moughon, Stewart E; Samudrala, RamBMC bioinformatics201136821920038
Adaptive decoding for brain-machine interfaces through Bayesian parameter updates.Li, Zheng; O'Doherty, Joseph E; Lebedev, Mikhail A; Nicolelis, Miguel A LNeural computation2011 Dec3162-20421919788
Galphas-biased beta2-adrenergic receptor signaling from restoring synchronous contraction in the failing heart.Chakir, Khalid; Depry, Charlene; Dimaano, Veronica L; Zhu, Wei-Zhong; Vanderheyden, Marc; Bartunek, Jozef; Abraham, Theodore P; Tomaselli, Gordon F; Liu, Shu-bai; Xiang, Yang K; Zhang, Manling; Takimoto, Eiki; Dulin, Nickolai; Xiao, Rui Ping; Zhang, Jin; Science translational medicine2011 Sep 14100ra8821918105
Evolutionary divergence of intrinsic and trans-regulated nucleosome positioning sequences reveals plastic rules for chromatin organization.Tsankov, Alex; Yanagisawa, Yoshimi; Rhind, Nicholas; Regev, Aviv; Rando, Oliver JGenome research2011 Nov1851-6221914852
Molecular cloaking of H2A.Z on mortal DNA chromosomes during nonrandom segregation.Huh, Yang Hoon; Sherley, James LStem cells (Dayton, Ohio)2011 Oct1620-721905168
In situ genetic correction of the sickle cell anemia mutation in human induced pluripotent stem cells using engineered zinc finger nucleases.Sebastiano, Vittorio; Maeder, Morgan L; Angstman, James F; Haddad, Bahareh; Khayter, Cyd; Yeo, Dana T; Goodwin, Mathew J; Hawkins, John S; Ramirez, Cherie L; Batista, Luis F Z; Artandi, Steven E; Wernig, Marius; Joung, J KeithStem cells (Dayton, Ohio)2011 Nov1717-2621898685
A simple and efficient route to the FKBP-binding domain from rapamycin.Li, Wei; Bhat, Shridhar; Liu, Jun OTetrahedron letters2011 Sep 285070-507221894238
Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses.Cabili, Moran N; Trapnell, Cole; Goff, Loyal; Koziol, Magdalena; Tazon-Vega, Barbara; Regev, Aviv; Rinn, John LGenes & development2011 Sep 151915-2721890647
The Temporal Structure of Scientific Consensus Formation.Shwed, Uri; Bearman, Peter SAmerican sociological review2010 Dec 1817-84021886269
The toxin and antidote puzzle: new ways to control insect pest populations through manipulating inheritance.Marshall, John MBioengineered bugs2011 Sep-Oct235-4021876382
Functional characterization of bacterial sRNAs using a network biology approach.Modi, Sheetal R; Camacho, Diogo M; Kohanski, Michael A; Walker, Graham C; Collins, James JProceedings of the National Academy of Sciences of the United States of America2011 Sep 1315522-721876160
Peroxisome proliferation-associated control of reactive oxygen species sets melanocortin tone and feeding in diet-induced obesity.Diano, Sabrina; Liu, Zhong-Wu; Jeong, Jin Kwon; Dietrich, Marcelo O; Ruan, Hai-Bin; Kim, Esther; Suyama, Shigetomo; Kelly, Kaitlin; Gyengesi, Erika; Arbiser, Jack L; Belsham, Denise D; Sarruf, David A; Schwartz, Michael W; Bennett, Anton M; Shanabrough, MNature medicine2011 Sep1121-721873987
Toward a whole-body neuroprosthetic.Lebedev, Mikhail A; Nicolelis, Miguel A LProgress in brain research201147-6021867793
Strain-specific differences in perinatal rodent oligodendrocyte lineage progression and its correlation with human.Dean, Justin M; Moravec, Matthew D; Grafe, Marjorie; Abend, Nicholas; Ren, Jennifer; Gong, Xi; Volpe, Joseph J; Jensen, Frances E; Hohimer, A Roger; Back, Stephen ADevelopmental neuroscience.2011;251-6021865655
Benign rolandic epileptiform discharges are associated with mood and behavior problems.Sarco, Dean P; Boyer, Katrina; Lundy-Krigbaum, Shannon M; Takeoka, Masanori; Jensen, Frances; Gregas, Matt; Waber, Deborah PEpilepsy & behavior : E&B2011 Oct298-30321862414
Prolonged oxaliplatin exposure alters intracellular calcium signaling: a new mechanism to explain oxaliplatin-associated peripheral neuropathy.Schulze, Christin; McGowan, Margit; Jordt, Sven-Eric; Ehrlich, Barbara EClinical colorectal cancer2011 Jun126-3321859566
MicroRNAs can generate thresholds in target gene expression.Mukherji, Shankar; Ebert, Margaret S; Zheng, Grace X Y; Tsang, John S; Sharp, Phillip A; van Oudenaarden, AlexanderNature genetics2011 Sep854-921857679
Interstitial contacts in an RNA-dependent RNA polymerase lattice.Tellez, Andres B; Wang, Jing; Tanner, Elizabeth J; Spagnolo, Jeannie F; Kirkegaard, Karla; Bullitt, EstherJournal of molecular biology2011 Sep 30737-5021839092
Chemical genetics analysis of an aniline mustard anticancer agent reveals complex I of the electron transport chain as a target.Fedeles, Bogdan I; Zhu, Angela Y; Young, Kellie S; Hillier, Shawn M; Proffitt, Kyle D; Essigmann, John M; Croy, Robert GThe Journal of biological chemistry.2011 Sep 30;33910-2021832047
Revealing off-target cleavage specificities of zinc-finger nucleases by in vitro selection.Pattanayak, Vikram; Ramirez, Cherie L; Joung, J Keith; Liu, David RNature methods2011 Sep765-7021822273
Targeted gene disruption in somatic zebrafish cells using engineered TALENs.Sander, Jeffry D; Cade, Lindsay; Khayter, Cyd; Reyon, Deepak; Peterson, Randall T; Joung, J Keith; Yeh, Jing-Ruey JNature biotechnology2011 Aug697-821822241
A resource for discovering specific and universal biomarkers for distributed stem cells.Noh, Minsoo; Smith, Janet L; Huh, Yang Hoon; Sherley, James LPloS one2011e2207721818293
Induction of stable drug resistance in human breast cancer cells using a combinatorial zinc finger transcription factor library.Lee, Jeongeun; Hirsh, Andrew S; Wittner, Ben S; Maeder, Morgan L; Singavarapu, Rajasekhar; Lang, Magdalena; Janarthanan, Sailajah; McDermott, Ultan; Yajnik, Vijay; Ramaswamy, Sridhar; Joung, J Keith; Sgroi, Dennis CPloS one2011e2111221818254
Impact of a stress-inducible switch to mutagenic repair of DNA breaks on mutation in Escherichia coli.Shee, Chandan; Gibson, Janet L; Darrow, Michele C; Gonzalez, Caleb; Rosenberg, Susan MProceedings of the National Academy of Sciences of the United States of America2011 Aug 1613659-6421808005
Comparison and calibration of different reporters for quantitative analysis of gene expression.Garcia, Hernan G; Lee, Heun Jin; Boedicker, James Q; Phillips, RobBiophysical journal2011 Aug 3535-4421806921
Elastic energy of polyhedral bilayer vesicles.Haselwandter, Christoph A; Phillips, RobPhysical review. E, Statistical, nonlinear, and soft matter physics2011 Jun06190121797397
Microbial genomics and infectious diseases.Relman, David AThe New England journal of medicine2011 Jul 28347-5721793746
What You Feel Influences What You See: The Role of Affective Feelings in Resolving Binocular Rivalry.Anderson, Eric; Siegel, Erika H; Barrett, Lisa FeldmanJournal of experimental social psychology2011 Jul856-86021789027
Design and Implementation of Functional Nanoelectronic Interfaces With Biomolecules, Cells, and Tissue Using Nanowire Device Arrays.Timko, Brian P; Cohen-Karni, Tzahi; Qing, Quan; Tian, Bozhi; Lieber, Charles MIEEE transactions on nanotechnology2010 May269-28021785576
Bridging Token Identity Theory and Supervenience Theory Through Psychological Construction.Barrett, Lisa FeldmanPsychological inquiry2011 Jan 1115-12721785534
The role of affective experience in work motivation: Test of a conceptual model.Seo, Myeong-Gu; Bartunek, Jean M; Barrett, Lisa FeldmanJournal of organizational behavior2010 Oct951-96821785527
Future developments in brain-machine interface research.Lebedev, Mikhail A; Tate, Andrew J; Hanson, Timothy L; Li, Zheng; O'Doherty, Joseph E; Winans, Jesse A; Ifft, Peter J; Zhuang, Katie Z; Fitzsimmons, Nathan A; Schwarz, David A; Fuller, Andrew M; An, Je Hi; Nicolelis, Miguel A LClinics (Sao Paulo, Brazil)201125-3221779720
Central dogma at the single-molecule level in living cells.Li, Gene-Wei; Xie, X SunneyNature2011 Jul 21308-1521776076
Long-term stability of neural prosthetic control signals from silicon cortical arrays in rhesus macaque motor cortex.Chestek, Cynthia A; Gilja, Vikash; Nuyujukian, Paul; Foster, Justin D; Fan, Joline M; Kaufman, Matthew T; Churchland, Mark M; Rivera-Alvidrez, Zuley; Cunningham, John P; Ryu, Stephen I; Shenoy, Krishna VJournal of neural engineering2011 Aug04500521775782
In situ structural characterization of a recombinant protein in native Escherichia coli membranes with solid-state magic-angle-spinning NMR.Fu, Riqiang; Wang, Xingsheng; Li, Conggang; Santiago-Miranda, Adriana N; Pielak, Gary J; Tian, FangJournal of the American Chemical Society2011 Aug 1712370-321774553
Symmetries in stimulus statistics shape the form of visual motion estimators.Fitzgerald, James E; Katsov, Alexander Y; Clandinin, Thomas R; Schnitzer, Mark JProceedings of the National Academy of Sciences of the United States of America2011 Aug 212909-1421768376
A dynamical systems view of motor preparation: implications for neural prosthetic system design.Shenoy, Krishna V; Kaufman, Matthew T; Sahani, Maneesh; Churchland, Mark MProgress in brain research201133-5821763517
Restriction of transient receptor potential vanilloid-1 to the peptidergic subset of primary afferent neurons follows its developmental downregulation in nonpeptidergic neurons.Cavanaugh, Daniel J; Chesler, Alexander T; Braz, Joao M; Shah, Nirao M; Julius, David; Basbaum, Allan IThe Journal of neuroscience : the official journal of the Society for Neuroscience2011 Jul 1310119-2721752988
Quantitative dissection of the simple repression input-output function.Garcia, Hernan G; Phillips, RobProceedings of the National Academy of Sciences of the United States of America2011 Jul 1912173-821730194
Building enhancers from the ground up: a synthetic biology approach.Amit, Roee; Garcia, Hernan G; Phillips, Rob; Fraser, Scott ECell2011 Jul 8105-1821729783
Probing individual environmental bacteria for viruses by using microfluidic digital PCR.Tadmor, Arbel D; Ottesen, Elizabeth A; Leadbetter, Jared R; Phillips, RobScience (New York, N.Y.)2011 Jul 158-6221719670
Immune activation, CD4+ T cell counts, and viremia exhibit oscillatory patterns over time in patients with highly resistant HIV infection.Kitchen, Christina M R; Yeghiazarian, Lilit; Hoh, Rebecca; McCune, Joseph M; Sinclair, Elizabeth; Martin, Jeffrey N; Deeks, Steven GPloS one2011e2119021701594
More effective nanomedicines through particle design.Wang, Jin; Byrne, James D; Napier, Mary E; DeSimone, Joseph MSmall (Weinheim an der Bergstrasse, Germany)2011 Jul 181919-3121695781
Defining the computational structure of the motion detector in Drosophila.Clark, Damon A; Bursztyn, Limor; Horowitz, Mark A; Schnitzer, Mark J; Clandinin, Thomas RNeuron2011 Jun 231165-7721689602
Fabrication of Density Gradients of Biodegradable Polymer Microparticles and Their Use in Guiding Neurite Outgrowth.Li, Xiaoran; Macewan, Matthew R; Xie Dr, Jingwei; Siewe, Daku; Yuan, Xiaoyan; Xia, YounanAdvanced functional materials2010 May 251632-163721687818
Combining Computational Fluid Dynamics and Agent-Based Modeling: a new approach to evacuation planning.Epstein, Joshua M; Pankajakshan, Ramesh; Hammond, Ross APloS one2011e2013921687788
Denoising two-photon calcium imaging data.Malik, Wasim Q; Schummers, James; Sur, Mriganka; Brown, Emery NPloS one2011e2049021687727
Physical Module Networks: an integrative approach for reconstructing transcription regulation.Novershtern, Noa; Regev, Aviv; Friedman, NirBioinformatics (Oxford, England)2011 Jul 1i177-8521685068
Noninvasive photoacoustic microscopy of living cells in two and three dimensions through enhancement by a metabolite dye.Zhang, Yu; Cai, Xin; Wang, Yu; Zhang, Chi; Li, Li; Choi, Sung-Wook; Wang, Lihong V; Xia, YounanAngewandte Chemie (International ed. in English)2011 Aug 17359-6321681876
Breaking free of sample size dogma to perform innovative translational research.Bacchetti, Peter; Deeks, Steven G; McCune, Joseph MScience translational medicine2011 Jun 1587ps2421677197
Quality metrics to accompany spike sorting of extracellular signals.Hill, Daniel N; Mehta, Samar B; Kleinfeld, DavidThe Journal of neuroscience : the official journal of the Society for Neuroscience.2011 Jun 15;8699-70521677152
Integration of cell-free protein coexpression with an enzyme-linked immunosorbent assay enables rapid analysis of protein-protein interactions directly from DNA.Layton, Curtis J; Hellinga, Homme WProtein science : a publication of the Protein Society2011 Aug1432-821674663
Gold Nanopyramids Assembled into High-Order Stacks Exhibit Increased SERS Response.Stoerzinger, Kelsey A; Hasan, Warefta; Lin, Julia Y; Robles, Alex; Odom, Teri WThe journal of physical chemistry letters2010 Apr 11046-105021666758
Effects of natural selection and gene conversion on the evolution of human glycophorins coding for MNS blood polymorphisms in malaria-endemic African populations.Ko, Wen-Ya; Kaercher, Kristin A; Giombini, Emanuela; Marcatili, Paolo; Froment, Alain; Ibrahim, Muntaser; Lema, Godfrey; Nyambo, Thomas B; Omar, Sabah A; Wambebe, Charles; Ranciaro, Alessia; Hirbo, Jibril B; Tishkoff, Sarah AAmerican journal of human genetics2011 Jun 10741-5421664997
The human brain in a dish: the promise of iPSC-derived neurons.Dolmetsch, Ricardo; Geschwind, Daniel HCell2011 Jun 10831-421663789
Nicotine decreases food intake through activation of POMC neurons.Mineur, Yann S; Abizaid, Alfonso; Rao, Yan; Salas, Ramiro; DiLeone, Ralph J; Gundisch, Daniela; Diano, Sabrina; De Biasi, Mariella; Horvath, Tamas L; Gao, Xiao-Bing; Picciotto, Marina RScience (New York, N.Y.)2011 Jun 101330-221659607
Neuroblast migration along the anteroposterior axis of C. elegans is controlled by opposing gradients of Wnts and a secreted Frizzled-related protein.Harterink, Martin; Kim, Dong Hyun; Middelkoop, Teije C; Doan, Thang Dinh; van Oudenaarden, Alexander; Korswagen, Hendrik CDevelopment (Cambridge, England)2011 Jul2915-2421653614
The effect of mutations on the alloreactive T cell receptor/peptide-MHC interface structure: a molecular dynamics study.Wolfson, Mikhail Y; Nam, Kwangho; Chakraborty, Arup KThe journal of physical chemistry. B2011 Jun 308317-2721651302
Risk as Social Context: Immigration Policy and Autism in California.Fountain, Christine; Bearman, PeterSociological forum (Randolph, N.J.)2011 Jun 1215-24021643443
High-fat feeding promotes obesity via insulin receptor/PI3K-dependent inhibition of SF-1 VMH neurons.Klockener, Tim; Hess, Simon; Belgardt, Bengt F; Paeger, Lars; Verhagen, Linda A W; Husch, Andreas; Sohn, Jong-Woo; Hampel, Brigitte; Dhillon, Harveen; Zigman, Jeffrey M; Lowell, Bradford B; Williams, Kevin W; Elmquist, Joel K; Horvath, Tamas L; KloppenburNature neuroscience2011 Jul911-821642975
Reconstitution of contractile actomyosin bundles.Thoresen, Todd; Lenz, Martin; Gardel, Margaret LBiophysical journal2011 Jun 82698-70521641315
Zinc-finger nucleases for somatic gene therapy: the next frontier.Rahman, Shamim H; Maeder, Morgan L; Joung, J Keith; Cathomen, ToniHuman gene therapy2011 Aug925-3321631241
The clinically available NMDA receptor antagonist, memantine, exhibits relative safety in the developing rat brain.Manning, Simon M; Boll, Griffin; Fitzgerald, Erin; Selip, Debra B; Volpe, Joseph J; Jensen, Frances EInternational journal of developmental neuroscience : the official journal of the International Society for Developmental Neuroscience.2011 Nov;767-7321624454
Silicon-Neuron Design: A Dynamical Systems Approach.Arthur, John V; Boahen, KwabenaIEEE transactions on circuits and systems. I, Regular papers : a publication of the IEEE Circuits and Systems Society20111034-104321617741
The visual impact of gossip.Anderson, Eric; Siegel, Erika H; Bliss-Moreau, Eliza; Barrett, Lisa FeldmanScience (New York, N.Y.)2011 Jun 171446-821596956
Involvement of adenosine A2A receptors in engulfment-dependent apoptotic cell suppression of inflammation.Koroskenyi, Krisztina; Duro, Edina; Pallai, Anna; Sarang, Zsolt; Kloor, Doris; Ucker, David S; Beceiro, Susana; Castrillo, Antonio; Chawla, Ajay; Ledent, Catherine A; Fesus, Laszlo; Szondy, ZsuzsaJournal of immunology (Baltimore, Md. : 1950)2011 Jun 157144-5521593381
Full-length transcriptome assembly from RNA-Seq data without a reference genome.Grabherr, Manfred G; Haas, Brian J; Yassour, Moran; Levin, Joshua Z; Thompson, Dawn A; Amit, Ido; Adiconis, Xian; Fan, Lin; Raychowdhury, Raktima; Zeng, Qiandong; Chen, Zehua; Mauceli, Evan; Hacohen, Nir; Gnirke, Andreas; Rhind, Nicholas; di Palma, FederiNature biotechnology2011 Jul644-5221572440
Numb links extracellular cues to intracellular polarity machinery to promote chemotaxis.Zhou, Pengcheng; Alfaro, Jose; Chang, Eun Hyuk; Zhao, Xuesong; Porcionatto, Marimelia; Segal, Rosalind ADevelopmental cell2011 May 17610-2221571219
Metabolite-enabled eradication of bacterial persisters by aminoglycosides.Allison, Kyle R; Brynildsen, Mark P; Collins, James JNature2011 May 12216-2021562562
A guide to delineate the logic of neurovascular signaling in the brain.Kleinfeld, David; Blinder, Pablo; Drew, Patrick J; Driscoll, Jonathan D; Muller, Arnaud; Tsai, Philbert S; Shih, Andy YFrontiers in neuroenergetics2011121559095
Tracking brain states under general anesthesia by using global coherence analysis.Cimenser, Aylin; Purdon, Patrick L; Pierce, Eric T; Walsh, John L; Salazar-Gomez, Andres F; Harrell, Priscilla G; Tavares-Stoeckel, Casie; Habeeb, Kathleen; Brown, Emery NProceedings of the National Academy of Sciences of the United States of America2011 May 248832-721555565
Shear thickening of F-actin networks crosslinked with non-muscle myosin IIB.Norstrom, Melanie; Gardel, Margaret LSoft matter2011 Jan 13228-323321552431
Socioeconomic Status and the Increased Prevalence of Autism in California.King, Marissa D; Bearman, Peter SAmerican sociological review2011 Apr 1320-34621547238
Generation of hot spots with silver nanocubes for single-molecule detection by surface-enhanced Raman scattering.Rycenga, Matthew; Xia, Xiaohu; Moran, Christine H; Zhou, Fei; Qin, Dong; Li, Zhi-Yuan; Xia, YounanAngewandte Chemie (International ed. in English)2011 Jun 65473-721542081
Fluctuating and sensory-induced vasodynamics in rodent cortex extend arteriole capacity.Drew, Patrick J; Shih, Andy Y; Kleinfeld, DavidProceedings of the National Academy of Sciences of the United States of America2011 May 178473-821536897
Macromolecular crowding fails to fold a globular protein in cells.Schlesinger, Alexander P; Wang, Yaqiang; Tadeo, Xavier; Millet, Oscar; Pielak, Gary JJournal of the American Chemical Society2011 Jun 18082-521534566
Gold nanocages: from synthesis to theranostic applications.Xia, Younan; Li, Weiyang; Cobley, Claire M; Chen, Jingyi; Xia, Xiaohu; Zhang, Qiang; Yang, Miaoxin; Cho, Eun Chul; Brown, Paige KAccounts of chemical research2011 Oct 18914-2421528889
The effect of sedimentation and diffusion on cellular uptake of gold nanoparticles.Cho, Eun Chul; Zhang, Qiang; Xia, YounanNature nanotechnology2011 Jun385-9121516092
Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells.Rabani, Michal; Levin, Joshua Z; Fan, Lin; Adiconis, Xian; Raychowdhury, Raktima; Garber, Manuel; Gnirke, Andreas; Nusbaum, Chad; Hacohen, Nir; Friedman, Nir; Amit, Ido; Regev, AvivNature biotechnology2011 May436-4221516085
General anesthesia and altered states of arousal: a systems neuroscience analysis.Brown, Emery N; Purdon, Patrick L; Van Dort, Christa JAnnual review of neuroscience2011601-2821513454
Comparative functional genomics of the fission yeasts.Rhind, Nicholas; Chen, Zehua; Yassour, Moran; Thompson, Dawn A; Haas, Brian J; Habib, Naomi; Wapinski, Ilan; Roy, Sushmita; Lin, Michael F; Heiman, David I; Young, Sarah K; Furuya, Kanji; Guo, Yabin; Pidoux, Alison; Chen, Huei Mei; Robbertse, Barbara; GolScience (New York, N.Y.)2011 May 20930-621511999
Assessment of cardio-respiratory interactions in preterm infants by bivariate autoregressive modeling and surrogate data analysis.Indic, Premananda; Bloch-Salisbury, Elisabeth; Bednarek, Frank; Brown, Emery N; Paydarfar, David; Barbieri, RiccardoEarly human development2011 Jul477-8721511413
Reporting from the field: genetically encoded fluorescent reporters uncover signaling dynamics in living biological systems.Mehta, Sohum; Zhang, JinAnnual review of biochemistry2011375-40121495849
Inverse Medea as a novel gene drive system for local population replacement: a theoretical analysis.Marshall, John M; Hay, Bruce AThe Journal of heredity2011 May-Jun336-4121493596
Genes methylated by DNA methyltransferase 3b are similar in mouse intestine and human colon cancer.Steine, Eveline J; Ehrich, Mathias; Bell, George W; Raj, Arjun; Reddy, Seshamma; van Oudenaarden, Alexander; Jaenisch, Rudolf; Linhart, Heinz GThe Journal of clinical investigation2011 May1748-5221490393
Emotion Generation and Emotion Regulation: One or Two Depends on Your Point of View.Gross, James J; Barrett, Lisa FeldmanEmotion review2011 Jan16-Aug21479078
Digital isothermal quantification of nucleic acids via simultaneous chemical initiation of recombinase polymerase amplification reactions on SlipChip.Shen, Feng; Davydova, Elena K; Du, Wenbin; Kreutz, Jason E; Piepenburg, Olaf; Ismagilov, Rustem FAnalytical chemistry2011 May 13533-4021476587
A versatile in vivo system for directed dissection of gene expression patterns.Gohl, Daryl M; Silies, Marion A; Gao, Xiaojing J; Bhalerao, Sheetal; Luongo, Francisco J; Lin, Chun-Chieh; Potter, Christopher J; Clandinin, Thomas RNature methods2011 Mar231-721473015
Photon counting, censor corrections, and lifetime imaging for improved detection in two-photon microscopy.Driscoll, Jonathan D; Shih, Andy Y; Iyengar, Satish; Field, Jeffrey J; White, G Allen; Squier, Jeffrey A; Cauwenberghs, Gert; Kleinfeld, DavidJournal of neurophysiology2011 Jun3106-1321471395
Interactions between Cdx genes and retinoic acid modulate early cardiogenesis.Lengerke, Claudia; Wingert, Rebecca; Beeretz, Michael; Grauer, Matthias; Schmidt, Anne G; Konantz, Martina; Daley, George Q; Davidson, Alan JDevelopmental biology2011 Jun 1134-4221466798
Targeted mutagenesis of duplicated genes in soybean with zinc-finger nucleases.Curtin, Shaun J; Zhang, Feng; Sander, Jeffry D; Haun, William J; Starker, Colby; Baltes, Nicholas J; Reyon, Deepak; Dahlborg, Elizabeth J; Goodwin, Mathew J; Coffman, Andrew P; Dobbs, Drena; Joung, J Keith; Voytas, Daniel F; Stupar, Robert MPlant physiology2011 Jun466-7321464476
Does acquired epileptogenesis in the immature brain require neuronal death.Baram, Tallie Z; Jensen, Frances E; Brooks-Kayal, AmyEpilepsy currents / American Epilepsy Society2011 Jan21-621461261
Genetically encodable fluorescent biosensors for tracking signaling dynamics in living cells.Newman, Robert H; Fosbrink, Matthew D; Zhang, JinChemical reviews2011 May 113614-6621456512
A Granger causality measure for point process models of ensemble neural spiking activity.Kim, Sanggyun; Putrino, David; Ghosh, Soumya; Brown, Emery NPLoS computational biology2011 Mare100111021455283
Validating transcripts with probes and imaging technology.Itzkovitz, Shalev; van Oudenaarden, AlexanderNature methods2011 AprS12-921451512
MicroRNA programs in normal and aberrant stem and progenitor cells.Arnold, Christopher P; Tan, Ruoying; Zhou, Baiyu; Yue, Si-Biao; Schaffert, Steven; Biggs, Joseph R; Doyonnas, Regis; Lo, Miao-Chia; Perry, John M; Renault, Valerie M; Sacco, Alessandra; Somervaille, Tim; Viatour, Patrick; Brunet, Anne; Cleary, Michael L; Genome research2011 May798-81021451113
Trpv1 reporter mice reveal highly restricted brain distribution and functional expression in arteriolar smooth muscle cells.Cavanaugh, Daniel J; Chesler, Alexander T; Jackson, Alexander C; Sigal, Yaron M; Yamanaka, Hiroki; Grant, Rebecca; O'Donnell, Dajan; Nicoll, Roger A; Shah, Nirao M; Julius, David; Basbaum, Allan IThe Journal of neuroscience : the official journal of the Society for Neuroscience2011 Mar 305067-7721451044
PAPI, a novel TUDOR-domain protein, complexes with AGO3, ME31B and TRAL in the nuage to silence transposition.Liu, Li; Qi, Hongying; Wang, Jianquan; Lin, HaifanDevelopment (Cambridge, England)2011 May1863-7321447556
Human leg model predicts ankle muscle-tendon morphology, state, roles and energetics in walking.Krishnaswamy, Pavitra; Brown, Emery N; Herr, Hugh MPLoS computational biology2011 Mare100110721445231
Single-neuron dynamics in human focal epilepsy.Truccolo, Wilson; Donoghue, Jacob A; Hochberg, Leigh R; Eskandar, Emad N; Madsen, Joseph R; Anderson, William S; Brown, Emery N; Halgren, Eric; Cash, Sydney SNature neuroscience2011 May635-4121441925
Comparative advantages of mechanical biosensors.Arlett, J L; Myers, E B; Roukes, M LNature nanotechnology2011 Apr203-1521441911
Luminescent kinase activity biosensors based on a versatile bimolecular switch.Herbst, Katie J; Allen, Michael D; Zhang, JinJournal of the American Chemical Society2011 Apr 205676-921438554
Eosinophils sustain adipose alternatively activated macrophages associated with glucose homeostasis.Wu, Davina; Molofsky, Ari B; Liang, Hong-Erh; Ricardo-Gonzalez, Roberto R; Jouihan, Hani A; Bando, Jennifer K; Chawla, Ajay; Locksley, Richard MScience (New York, N.Y.)2011 Apr 8243-721436399
A hierarchical Bayesian approach for learning sparse spatio-temporal decompositions of multichannel EEG.Wu, Wei; Chen, Zhe; Gao, Shangkai; Brown, Emery NNeuroImage2011 Jun 151929-4521420499
Cellular decision making and biological noise: from microbes to mammals.Balazsi, Gabor; van Oudenaarden, Alexander; Collins, James JCell2011 Mar 18910-2521414483
Impulse control: temporal dynamics in gene transcription.Yosef, Nir; Regev, AvivCell2011 Mar 18886-9621414481
Morphological phase diagram for lipid membrane domains with entropic tension.Rim, J E; Ursell, T S; Phillips, R; Klug, W SPhysical review letters2011 Feb 405780121405437
A career pathway in protein folding: from model peptides to postreductionist protein science.Gierasch, Lila MProtein science : a publication of the Protein Society.2011 May;783-9021404361
A randomized, controlled trial of raltegravir intensification in antiretroviral-treated, HIV-infected patients with a suboptimal CD4+ T cell response.Hatano, Hiroyu; Hayes, Timothy L; Dahl, Viktor; Sinclair, Elizabeth; Lee, Tzong-Hae; Hoh, Rebecca; Lampiris, Harry; Hunt, Peter W; Palmer, Sarah; McCune, Joseph M; Martin, Jeffrey N; Busch, Michael P; Shacklett, Barbara L; Deeks, Steven GThe Journal of infectious diseases2011 Apr 1960-821402547
A new theranostic system based on gold nanocages and phase-change materials with unique features for photoacoustic imaging and controlled release.Moon, Geon Dae; Choi, Sung-Wook; Cai, Xin; Li, Weiyang; Cho, Eun Chul; Jeong, Unyong; Wang, Lihong V; Xia, YounanJournal of the American Chemical Society2011 Apr 64762-521401092
Controlling the synthesis and assembly of silver nanostructures for plasmonic applications.Rycenga, Matthew; Cobley, Claire M; Zeng, Jie; Li, Weiyang; Moran, Christine H; Zhang, Qiang; Qin, Dong; Xia, YounanChemical reviews2011 Jun 83669-71221395318
Effect of promoter architecture on the cell-to-cell variability in gene expression.Sanchez, Alvaro; Garcia, Hernan G; Jones, Daniel; Phillips, Rob; Kondev, JanePLoS computational biology2011 Mare100110021390269
Dodging drug-resistant cancer with diamonds.Merkel, Timothy J; DeSimone, Joseph MScience translational medicine2011 Mar 973ps821389261
Surface adsorbate fluctuations and noise in nanoelectromechanical systems.Yang, Y T; Callegari, C; Feng, X L; Roukes, M LNano letters2011 Apr 131753-921388120
A miniaturized technique for assessing protein thermodynamics and function using fast determination of quantitative cysteine reactivity.Isom, Daniel G; Marguet, Philippe R; Oas, Terrence G; Hellinga, Homme WProteins2011 Apr1034-4721387407
Cell-substrate interactions.Gardel, Margaret; Schwarz, UlrichJournal of physics. Condensed matter : an Institute of Physics journal2010 May 1919030121386358
Measurement of absolute T cell receptor rearrangement diversity.Baum, Paul D; Young, Jennifer J; McCune, Joseph MJournal of immunological methods2011 May 3145-5321385585
Cell-ECM traction force modulates endogenous tension at cell-cell contacts.Maruthamuthu, Venkat; Sabass, Benedikt; Schwarz, Ulrich S; Gardel, Margaret LProceedings of the National Academy of Sciences of the United States of America2011 Mar 224708-1321383129
Cytoplasmic intron sequence-retaining transcripts can be dendritically targeted via ID element retrotransposons.Buckley, Peter T; Lee, Miler T; Sul, Jai-Yoon; Miyashiro, Kevin Y; Bell, Thomas J; Fisher, Stephen A; Kim, Junhyong; Eberwine, JamesNeuron2011 Mar 10877-8421382548
The developing oligodendrocyte: key cellular target in brain injury in the premature infant.Volpe, Joseph J; Kinney, Hannah C; Jensen, Frances E; Rosenberg, Paul AInternational journal of developmental neuroscience : the official journal of the International Society for Developmental Neuroscience.2011 Jun;423-4021382469
Drug tolerance in replicating mycobacteria mediated by a macrophage-induced efflux mechanism.Adams, Kristin N; Takaki, Kevin; Connolly, Lynn E; Wiedenhoft, Heather; Winglee, Kathryn; Humbert, Olivier; Edelstein, Paul H; Cosma, Christine L; Ramakrishnan, LalitaCell2011 Apr 139-5321376383
Stem cells in veterinary medicine.Fortier, Lisa A; Travis, Alexander JStem cell research & therapy2011921371354
Microfluidics using spatially defined arrays of droplets in one, two, and three dimensions.Pompano, Rebecca R; Liu, Weishan; Du, Wenbin; Ismagilov, Rustem FAnnual review of analytical chemistry (Palo Alto, Calif.)201159-8121370983
Evidence from Cameroon reveals differences in the genetic structure and histories of chimpanzee populations.Gonder, Mary Katherine; Locatelli, Sabrina; Ghobrial, Lora; Mitchell, Matthew W; Kujawski, Joseph T; Lankester, Felix J; Stewart, Caro-Beth; Tishkoff, Sarah AProceedings of the National Academy of Sciences of the United States of America2011 Mar 224766-7121368170
Caenorhabditis elegans aristaless/Arx gene alr-1 restricts variable gene expression.Topalidou, Irini; van Oudenaarden, Alexander; Chalfie, MartinProceedings of the National Academy of Sciences of the United States of America2011 Mar 84063-821368126
Development of later life spontaneous seizures in a rodent model of hypoxia-induced neonatal seizures.Rakhade, Sanjay N; Klein, Peter M; Huynh, Thanthao; Hilario-Gomez, Cristina; Kosaras, Bela; Rotenberg, Alexander; Jensen, Frances EEpilepsia2011 Apr753-6521366558
The bacterial two-hybrid system as a reporter system for analyzing protein-protein interactions.Giesecke, Astrid V; Joung, J KeithCSH protocols2007pdb.prot467221357036
In vivo imaging of myelin in the vertebrate central nervous system using third harmonic generation microscopy.Farrar, Matthew J; Wise, Frank W; Fetcho, Joseph R; Schaffer, Chris BBiophysical journal2011 Mar 21362-7121354410
Genetics. Systems genetics.Nadeau, Joseph H; Dudley, Aimee MScience (New York, N.Y.).2011 Feb 25;1015-621350153
Neuropeptide Y-like signalling and nutritionally mediated gene expression and behaviour in the honey bee.Ament, S A; Velarde, R A; Kolodkin, M H; Moyse, D; Robinson, G EInsect molecular biology2011 Jun335-4521349120
Direct activation of Epac by sulfonylurea is isoform selective.Herbst, Katie J; Coltharp, Carla; Amzel, L Mario; Zhang, JinChemistry & biology2011 Feb 25243-5121338921
Excitatory projection neuron subtypes control the distribution of local inhibitory interneurons in the cerebral cortex.Lodato, Simona; Rouaux, Caroline; Quast, Kathleen B; Jantrachotechatchawan, Chanati; Studer, Michele; Hensch, Takao K; Arlotta, PaolaNeuron2011 Feb 24763-7921338885
Thermodynamics of biological processes.Garcia, Hernan G; Kondev, Jane; Orme, Nigel; Theriot, Julie A; Phillips, RobMethods in enzymology201127-5921333788
Insulin-like growth factor 1-mediated hyperthermia involves anterior hypothalamic insulin receptors.Sanchez-Alavez, Manuel; Osborn, Olivia; Tabarean, Iustin V; Holmberg, Kristina H; Eberwine, James; Kahn, C Ronald; Bartfai, TamasThe Journal of biological chemistry2011 Apr 2914983-9021330367
Space coding by gamma oscillations in the barn owl optic tectum.Sridharan, Devarajan; Boahen, Kwabena; Knudsen, Eric IJournal of neurophysiology2011 May2005-1721325681
Gold nanocages covered with thermally-responsive polymers for controlled release by high-intensity focused ultrasound.Li, Weiyang; Cai, Xin; Kim, Chulhong; Sun, Guorong; Zhang, Yu; Deng, Rui; Yang, Miaoxin; Chen, Jingyi; Achilefu, Samuel; Wang, Lihong V; Xia, YounanNanoscale2011 Apr1724-3021321760
A point process model for auditory neurons considering both their intrinsic dynamics and the spectrotemporal properties of an extrinsic signal.Plourde, Eric; Delgutte, Bertrand; Brown, Emery NIEEE transactions on bio-medical engineering2011 Jun1507-1021317068
Using induced pluripotent stem cells to investigate cardiac phenotypes in Timothy syndrome.Yazawa, Masayuki; Hsueh, Brian; Jia, Xiaolin; Pasca, Anca M; Bernstein, Jonathan A; Hallmayer, Joachim; Dolmetsch, Ricardo ENature2011 Mar 10230-421307850
Dynamic and structural signatures of lamellar actomyosin force generation.Aratyn-Schaus, Yvonne; Oakes, Patrick W; Gardel, Margaret LMolecular biology of the cell2011 Apr 151330-921307339
Characterizing ligand-gated ion channel receptors with genetically encoded Ca2++ sensors.Yamauchi, John G; Nemecz, Ákos; Nguyen, Quoc Thang; Muller, Arnaud; Schroeder, Lee F; Talley, Todd T; Lindstrom, Jon; Kleinfeld, David; Taylor, PalmerPloS one.2011;21305050
A low T regulatory cell response may contribute to both viral control and generalized immune activation in HIV controllers.Hunt, Peter W; Landay, Alan L; Sinclair, Elizabeth; Martinson, Jeffrey A; Hatano, Hiroyu; Emu, Brinda; Norris, Philip J; Busch, Michael P; Martin, Jeffrey N; Brooks, Cicely; McCune, Joseph M; Deeks, Steven GPloS one2011e1592421305005
Considering PTSD from the perspective of brain processes: a psychological construction approach.Suvak, Michael K; Barrett, Lisa FeldmanJournal of traumatic stress2011 Feb3-2421298725
High-throughput single-molecule optofluidic analysis.Kim, Soohong; Streets, Aaron M; Lin, Ron R; Quake, Stephen R; Weiss, Shimon; Majumdar, Devdoot SNature methods2011 Mar242-521297618
Nanofiber membranes with controllable microwells and structural cues and their use in forming cell microarrays and neuronal networks.Xie, Jingwei; Liu, Wenying; MacEwan, Matthew R; Yeh, Yi-Chun; Thomopoulos, Stavros; Xia, YounanSmall (Weinheim an der Bergstrasse, Germany)2011 Feb 7293-721294253
An optogenetic toolbox designed for primates.Diester, Ilka; Kaufman, Matthew T; Mogri, Murtaza; Pashaie, Ramin; Goo, Werapong; Yizhar, Ofer; Ramakrishnan, Charu; Deisseroth, Karl; Shenoy, Krishna VNature neuroscience2011 Mar387-9721278729
ZFNGenome: a comprehensive resource for locating zinc finger nuclease target sites in model organisms.Reyon, Deepak; Kirkpatrick, Jessica R; Sander, Jeffry D; Zhang, Feng; Voytas, Daniel F; Joung, J Keith; Dobbs, Drena; Coffman, Clark RBMC genomics20118321276248
Dynamic local unfolding in the serpin ýý-1 antitrypsin provides a mechanism for loop insertion and polymerization.Krishnan, Beena; Gierasch, Lila MNature structural & molecular biology2011 Feb222-621258324
Challenges and opportunities for next-generation intracortically based neural prostheses.Gilja, Vikash; Chestek, Cindy A; Diester, Ilka; Henderson, Jaimie M; Deisseroth, Karl; Shenoy, Krishna VIEEE transactions on bio-medical engineering2011 Jul1891-921257365
How one bad protein spoils the barrel: structural details of ýý2-microglobulin amyloidogenicity.Gierasch, Lila MMolecular cell2011 Jan 21129-3121255721
HIV-specific CD4+ T cells may contribute to viral persistence in HIV controllers.Hunt, Peter W; Hatano, Hiroyu; Sinclair, Elizabeth; Lee, Tzong-Hae; Busch, Michael P; Martin, Jeffrey N; McCune, Joseph M; Deeks, Steven GClinical infectious diseases : an official publication of the Infectious Diseases Society of America2011 Mar 1681-721245154
Densely interconnected transcriptional circuits control cell states in human hematopoiesis.Novershtern, Noa; Subramanian, Aravind; Lawton, Lee N; Mak, Raymond H; Haining, W Nicholas; McConkey, Marie E; Habib, Naomi; Yosef, Nir; Chang, Cindy Y; Shay, Tal; Frampton, Garrett M; Drake, Adam C B; Leskov, Ilya; Nilsson, Bjorn; Preffer, Fred; DombkowsCell2011 Jan 21296-30921241896
Optogenetic manipulation of neural activity in freely moving Caenorhabditis elegans.Leifer, Andrew M; Fang-Yen, Christopher; Gershow, Marc; Alkema, Mark J; Samuel, Aravinthan D TNature methods2011 Feb147-5221240279
Minimal bending energies of bilayer polyhedra.Haselwandter, Christoph A; Phillips, RobPhysical review letters2010 Nov 2622810121231425
An enzyme-sensitive probe for photoacoustic imaging and fluorescence detection of protease activity.Xia, Xiaohu; Yang, Miaoxin; Oetjen, L Kyle; Zhang, Yu; Li, Qingge; Chen, Jingyi; Xia, YounanNanoscale2011 Mar950-321225037
Hepatic gene expression profiling of 5'-AMP-induced hypometabolism in mice.Zhao, Zhaoyang; Miki, Takao; Van Oort-Jansen, Anita; Matsumoto, Tomoko; Loose, David S; Lee, Cheng ChiPhysiological genomics2011 Apr 12325-4521224422
Closely spaced pregnancies are associated with increased odds of autism in California sibling births.Cheslack-Postava, Keely; Liu, Kayuet; Bearman, Peter SPediatrics2011 Feb246-5321220394
Using mechanobiological mimicry of red blood cells to extend circulation times of hydrogel microparticles.Merkel, Timothy J; Jones, Stephen W; Herlihy, Kevin P; Kersey, Farrell R; Shields, Adam R; Napier, Mary; Luft, J Christopher; Wu, Huali; Zamboni, William C; Wang, Andrew Z; Bear, James E; DeSimone, Joseph MProceedings of the National Academy of Sciences of the United States of America2011 Jan 11586-9121220299
Blinders, phenotype, and fashionable genetic analysis: a critical examination of the current state of epilepsy genetic studies.Greenberg, David A; Subaran, RyanEpilepsia2011 Jan1-921219301
Identification of candidate IgG biomarkers for Alzheimer's disease via combinatorial library screening.Reddy, M Muralidhar; Wilson, Rosemary; Wilson, Johnnie; Connell, Steven; Gocke, Anne; Hynan, Linda; German, Dwight; Kodadek, ThomasCell2011 Jan 7132-4221215375
Tunable signal processing in synthetic MAP kinase cascades.O'Shaughnessy, Ellen C; Palani, Santhosh; Collins, James J; Sarkar, Casim ACell2011 Jan 7119-3121215374
Epilepsy as a spectrum disorder: Implications from novel clinical and basic neuroscience.Jensen, Frances EEpilepsia2011 Jan1-621214533
Bacteria as control engineers.Allison, Kyle R; Collins, James JMolecular cell2011 Jan 74-521211717
Development of proneurogenic, neuroprotective small molecules.MacMillan, Karen S; Naidoo, Jacinth; Liang, Jue; Melito, Lisa; Williams, Noelle S; Morlock, Lorraine; Huntington, Paula J; Estill, Sandi Jo; Longgood, Jamie; Becker, Ginger L; McKnight, Steven L; Pieper, Andrew A; De Brabander, Jef K; Ready, Joseph MJournal of the American Chemical Society2011 Feb 91428-3721210688
CXCR6, a newly defined biomarker of tissue-specific stem cell asymmetric self-renewal, identifies more aggressive human melanoma cancer stem cells.Taghizadeh, Rouzbeh; Noh, Minsoo; Huh, Yang Hoon; Ciusani, Emilio; Sigalotti, Luca; Maio, Michele; Arosio, Beatrice; Nicotra, Maria R; Natali, PierGiorgio; Sherley, James L; La Porta, Caterina A MPloS one2010e1518321203549
Grounding emotion in situated conceptualization.Wilson-Mendenhall, Christine D; Barrett, Lisa Feldman; Simmons, W Kyle; Barsalou, Lawrence WNeuropsychologia2011 Apr1105-2721192959
Strain-resolved community genomic analysis of gut microbial colonization in a premature infant.Morowitz, Michael J; Denef, Vincent J; Costello, Elizabeth K; Thomas, Brian C; Poroyko, Valeriy; Relman, David A; Banfield, Jillian FProceedings of the National Academy of Sciences of the United States of America2011 Jan 181128-3321191099
General anesthesia, sleep, and coma.Brown, Emery N; Lydic, Ralph; Schiff, Nicholas DThe New England journal of medicine2010 Dec 302638-5021190458
Amygdala volume and social network size in humans.Bickart, Kevin C; Wright, Christopher I; Dautoff, Rebecca J; Dickerson, Bradford C; Barrett, Lisa FeldmanNature neuroscience2011 Feb163-421186358
Engineering the Properties of Metal Nanostructures via Galvanic Replacement Reactions.Cobley, Claire M; Xia, YounanMaterials science & engineering. R, Reports : a review journal2010 Nov 2244-6221180400
Preparation of complaint matrices for quantifying cellular contraction.Aratyn-Schaus, Yvonne; Oakes, Patrick W; Stricker, Jonathan; Winter, Stephen P; Gardel, Margaret LJournal of visualized experiments : JoVE201021178972
A computational model predicts Xenopus meiotic spindle organization.Loughlin, Rose; Heald, Rebecca; Nedelec, FrancoisThe Journal of cell biology2010 Dec 271239-4921173114
Emotional granularity and borderline personality disorder.Suvak, Michael K; Litz, Brett T; Sloan, Denise M; Zanarini, Mary C; Barrett, Lisa Feldman; Hofmann, Stefan GJournal of abnormal psychology2011 May414-2621171723
Whole-genome molecular haplotyping of single cells.Fan, H Christina; Wang, Jianbin; Potanina, Anastasia; Quake, Stephen RNature biotechnology.2011 Jan;51-721170043
Fetal and adult hematopoietic stem cells give rise to distinct T cell lineages in humans.Mold, Jeff E; Venkatasubrahmanyam, Shivkumar; Burt, Trevor D; Michaelsson, Jakob; Rivera, Jose M; Galkina, Sofiya A; Weinberg, Kenneth; Stoddart, Cheryl A; McCune, Joseph MScience (New York, N.Y.)2010 Dec 171695-921164017
Selection-free zinc-finger-nuclease engineering by context-dependent assembly (CoDA).Sander, Jeffry D; Dahlborg, Elizabeth J; Goodwin, Mathew J; Cade, Lindsay; Zhang, Feng; Cifuentes, Daniel; Curtin, Shaun J; Blackburn, Jessica S; Thibodeau-Beganny, Stacey; Qi, Yiping; Pierick, Christopher J; Hoffman, Ellen; Maeder, Morgan L; Khayter, CydNature methods2011 Jan67-921151135
IL-4/STAT6 immune axis regulates peripheral nutrient metabolism and insulin sensitivity.Ricardo-Gonzalez, Roberto R; Red Eagle, Alex; Odegaard, Justin I; Jouihan, Hani; Morel, Christine R; Heredia, Jose E; Mukundan, Lata; Wu, Davina; Locksley, Richard M; Chawla, AjayProceedings of the National Academy of Sciences of the United States of America2010 Dec 2822617-2221149710
Thalamocortical model for a propofol-induced alpha-rhythm associated with loss of consciousness.Ching, Shinung; Cimenser, Aylin; Purdon, Patrick L; Brown, Emery N; Kopell, Nancy JProceedings of the National Academy of Sciences of the United States of America2010 Dec 2822665-7021149695
Analysis of streptococcal CRISPRs from human saliva reveals substantial sequence diversity within and between subjects over time.Pride, David T; Sun, Christine L; Salzman, Julia; Rao, Nitya; Loomer, Peter; Armitage, Gary C; Banfield, Jillian F; Relman, David AGenome research2011 Jan126-3621149389
Myocardial lineage development.Evans, Sylvia M; Yelon, Deborah; Conlon, Frank L; Kirby, Margaret LCirculation research2010 Dec 101428-4421148449
An oscillatory switch in mTOR kinase activity sets regulatory T cell responsiveness.Procaccini, Claudio; De Rosa, Veronica; Galgani, Mario; Abanni, Luisa; Cali, Gaetano; Porcellini, Antonio; Carbone, Fortunata; Fontana, Silvia; Horvath, Tamas L; La Cava, Antonio; Matarese, GiuseppeImmunity2010 Dec 14929-4121145759
MicroRNAs in a cardiac loop: progenitor or myocyte?Evans, Sylvia M; Moretti, Alessandra; Laugwitz, Karl-LudwigDevelopmental cell2010 Dec 14787-821145492
Association of the small GTPase Rheb with the NMDA receptor subunit NR3A.Sucher, Nikolaus J; Yu, Eric; Chan, Shing Fai; Miri, Mitra; Lee, Benjamin J; Xiao, Bo; Worley, Paul F; Jensen, Frances ENeuro-Signals2010203-921135540
Immune responses to the oral administration of recombinant Bacillus subtilis expressing multi-epitopes of foot-and-mouth disease virus and a cholera toxin B subunit.Hu, Bo; Li, Chang; Lu, Huijun; Zhu, Zhanbo; Du, Shouwen; Ye, Ming; Tan, Lei; Ren, Dayong; Han, Jiali; Kan, Shifu; Wang, Jing; Jin, NingyiJournal of virological methods.2011 Jan;21129406
Sustained activation of nuclear erythroid 2-related factor 2/antioxidant response element signaling promotes reductive stress in the human mutant protein aggregation cardiomyopathy in mice.Rajasekaran, Namakkal Soorappan; Varadharaj, Saradhadevi; Khanderao, Gayatri D; Davidson, Christopher J; Kannan, Sankaranarayanan; Firpo, Matthew A; Zweier, Jay L; Benjamin, Ivor JAntioxidants & redox signaling2011 Mar 15957-7121126175
IL-22+ CD4+ T cells are associated with therapeutic trichuris trichiura infection in an ulcerative colitis patient.Broadhurst, Mara J; Leung, Jacqueline M; Kashyap, Vikram; McCune, Joseph M; Mahadevan, Uma; McKerrow, James H; Loke, P'ngScience translational medicine2010 Dec 160ra8821123809
In-cell protein NMR and protein leakage.Barnes, Christopher O; Pielak, Gary JProteins2011 Feb347-5121120863
Protein folding in the cell: challenges and progress.Gershenson, Anne; Gierasch, Lila MCurrent opinion in structural biology2011 Feb32-4121112769
Design, construction, and validation of a modular library of sequence diversity standards for polymerase chain reaction.Baum, Paul D; Young, Jennifer J; Zhang, Qianjun; Kasakow, Zeljka; McCune, Joseph MAnalytical biochemistry2011 Apr 1106-1521111699
The Yb body, a major site for Piwi-associated RNA biogenesis and a gateway for Piwi expression and transport to the nucleus in somatic cells.Qi, Hongying; Watanabe, Toshiaki; Ku, Hsueh-Yen; Liu, Na; Zhong, Mei; Lin, HaifanThe Journal of biological chemistry2011 Feb 43789-9721106531
Tunable bifunctional silyl ether cross-linkers for the design of acid-sensitive biomaterials.Parrott, Matthew C; Luft, J Chris; Byrne, James D; Fain, John H; Napier, Mary E; Desimone, Joseph MJournal of the American Chemical Society2010 Dec 2217928-3221105720
Signaling diversity of PKA achieved via a Ca2+-cAMP-PKA oscillatory circuit.Ni, Qiang; Ganesan, Ambhighainath; Aye-Han, Nwe-Nwe; Gao, Xinxin; Allen, Michael D; Levchenko, Andre; Zhang, JinNature chemical biology2011 Jan34-4021102470
Low-dimensional neural features predict muscle EMG signals.Rivera-Alvidrez, Zuley; Kalmar, Rachel S; Ryu, Stephen I; Shenoy, Krishna VConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20106027-3321097116
A differential autoregressive modeling approach within a point process framework for non-stationary heartbeat intervals analysis.Chen, Zhe; Purdon, Patrick L; Brown, Emery N; Barbieri, RiccardoConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20103567-7021096829
Psychophysiological signals associated with affective states.Mauri, Maurizio; Magagnin, Valentina; Cipresso, Pietro; Mainardi, Luca; Brown, Emery N; Cerutti, Sergio; Villamira, Marco; Barbieri, RiccardoConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20103563-621096828
The Fitzhugh-Nagumo model: Firing modes with time-varying parameters & parameter estimation.Faghih, Rose T; Savla, Ketan; Dahleh, Munther A; Brown, Emery NConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20104116-921096631
Point process time-frequency analysis of respiratory sinus arrhythmia under altered respiration dynamics.Kodituwakku, Sandun; Lazar, Sara W; Indic, Premananda; Brown, Emery N; Barbieri, RiccardoConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20101622-521096135
Three-dimensional scaffolds for tissue engineering: the importance of uniformity in pore size and structure.Choi, Sung-Wook; Zhang, Yu; Xia, YounanLangmuir : the ACS journal of surfaces and colloids2010 Dec 2119001-621090781
Semele: a killer-male, rescue-female system for suppression and replacement of insect disease vector populations.Marshall, John M; Pittman, Geoffrey W; Buchman, Anna B; Hay, Bruce AGenetics2011 Feb535-5121078687
Efficient decoding with steady-state Kalman filter in neural interface systems.Malik, Wasim Q; Truccolo, Wilson; Brown, Emery N; Hochberg, Leigh RIEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society2011 Feb25-3421078582
Inorganic nanoparticle-based contrast agents for molecular imaging.Cho, Eun Chul; Glaus, Charles; Chen, Jingyi; Welch, Michael J; Xia, YounanTrends in molecular medicine2010 Dec561-7321074494
Lynx1, a cholinergic brake, limits plasticity in adult visual cortex.Morishita, Hirofumi; Miwa, Julie M; Heintz, Nathaniel; Hensch, Takao KScience (New York, N.Y.)2010 Nov 261238-4021071629
Medea selfish genetic elements as tools for altering traits of wild populations: a theoretical analysis.Ward, Catherine M; Su, Jessica T; Huang, Yunxin; Lloyd, Alun L; Gould, Fred; Hay, Bruce AEvolution; international journal of organic evolution2011 Apr1149-6221062278
Thermodynamic analysis of ligand-induced changes in protein thermal unfolding applied to high-throughput determination of ligand affinities with extrinsic fluorescent dyes.Layton, Curtis J; Hellinga, Homme WBiochemistry2010 Dec 2810831-4121050007
Predicting success of oligomerized pool engineering (OPEN) for zinc finger target site sequences.Sander, Jeffry D; Reyon, Deepak; Maeder, Morgan L; Foley, Jonathan E; Thibodeau-Beganny, Stacey; Li, Xiaohong; Regan, Maureen R; Dahlborg, Elizabeth J; Goodwin, Mathew J; Fu, Fengli; Voytas, Daniel F; Joung, J Keith; Dobbs, DrenaBMC bioinformatics201054321044337
Running hot and cold: behavioral strategies, neural circuits, and the molecular machinery for thermotaxis in C. elegans and Drosophila.Garrity, Paul A; Goodman, Miriam B; Samuel, Aravinthan D; Sengupta, PialiGenes & development2010 Nov 12365-8221041406
Cortical preparatory activity: representation of movement or first cog in a dynamical machine?Churchland, Mark M; Cunningham, John P; Kaufman, Matthew T; Ryu, Stephen I; Shenoy, Krishna VNeuron2010 Nov 4387-40021040842
Alternative macrophage activation and metabolism.Odegaard, Justin I; Chawla, AjayAnnual review of pathology2011275-9721034223
Living the high life: high-altitude adaptation.Scheinfeldt, Laura B; Tishkoff, Sarah AGenome biology201013320979669
A ''window of opportunity:'' the reduction of coronary heart disease and total mortality with menopausal therapies is age- and time-dependent.Hodis, Howard N; Mack, Wendy JBrain research.2011 Mar 16;244-5220977895
Age of diagnosis for autism: individual and community factors across 10 birth cohorts.Fountain, Christine; King, Marissa D; Bearman, Peter SJournal of epidemiology and community health2011 Jun503-1020974836
Movement, technology and discovery in the zebrafish.McLean, David L; Fetcho, Joseph RCurrent opinion in neurobiology2011 Feb110-520970321
Control of masculinization of the brain and behavior.Wu, Melody V; Shah, Nirao MCurrent opinion in neurobiology2011 Feb116-2320970320
Chronic optical access through a polished and reinforced thinned skull.Drew, Patrick J; Shih, Andy Y; Driscoll, Jonathan D; Knutsen, Per Magne; Blinder, Pablo; Davalos, Dimitrios; Akassoglou, Katerina; Tsai, Philbert S; Kleinfeld, DavidNature methods.2010 Dec;981-420966916
SmashCell: a software framework for the analysis of single-cell amplified genome sequences.Harrington, Eoghan D; Arumugam, Manimozhiyan; Raes, Jeroen; Bork, Peer; Relman, David ABioinformatics (Oxford, England)2010 Dec 12979-8020966005
The aging stress response.Haigis, Marcia C; Yankner, Bruce AMolecular cell2010 Oct 22333-4420965426
Au@Ag core-shell nanocubes with finely tuned and well-controlled sizes, shell thicknesses, and optical properties.Ma, Yanyun; Li, Weiyang; Cho, Eun Chul; Li, Zhiyuan; Yu, Taekyung; Zeng, Jie; Xie, Zhaoxiong; Xia, YounanACS nano2010 Nov 236725-3420964400
Passenger mutations as a marker of clonal cell lineages in emerging neoplasia.Salk, Jesse J; Horwitz, Marshall SSeminars in cancer biology2010 Oct294-30320951806
Nuclear size is regulated by importin ýý and Ntf2 in Xenopus.Levy, Daniel L; Heald, RebeccaCell2010 Oct 15288-9820946986
Reconstructing gene histories in Ascomycota fungi.Wapinski, Ilan; Regev, AvivMethods in enzymology2010447-8520946821
Dynamic assessment of baroreflex control of heart rate during induction of propofol anesthesia using a point process method.Chen, Zhe; Purdon, Patrick L; Harrell, Grace; Pierce, Eric T; Walsh, John; Brown, Emery N; Barbieri, RiccardoAnnals of biomedical engineering2011 Jan260-7620945159
A closed-loop human simulator for investigating the role of feedback control in brain-machine interfaces.Cunningham, John P; Nuyujukian, Paul; Gilja, Vikash; Chestek, Cindy A; Ryu, Stephen I; Shenoy, Krishna VJournal of neurophysiology2011 Apr1932-4920943945
Statistical inference for assessing functional connectivity of neuronal ensembles with sparse spiking data.Chen, Zhe; Putrino, David F; Ghosh, Soumya; Barbieri, Riccardo; Brown, Emery NIEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society2011 Apr121-3520937583
Biocompatibility and Reduced Drug Absorption of Sol-Gel-Treated Poly(dimethyl siloxane) for Microfluidic Cell Culture Applications.Gomez-Sjoberg, Rafael; Leyrat, Anne A; Houseman, Benjamin T; Shokat, Kevan; Quake, Stephen RAnalytical chemistry2010 Oct 1120936785
Imaging activity-dependent regulation of neurexin-neuroligin interactions using trans-synaptic enzymatic biotinylation.Thyagarajan, Amar; Ting, Alice YCell2010 Oct 29456-6920933261
A general mechanism for network-dosage compensation in gene circuits.Acar, Murat; Pando, Bernardo F; Arnold, Frances H; Elowitz, Michael B; van Oudenaarden, AlexanderScience (New York, N.Y.)2010 Sep 241656-6020929850
The CRAC channel activator STIM1 binds and inhibits L-type voltage-gated calcium channels.Park, Chan Young; Shcheglovitov, Aleksandr; Dolmetsch, RicardoScience (New York, N.Y.)2010 Oct 1101-520929812
Naive human T cells are activated and proliferate in response to the heme oxygenase-1 inhibitor tin mesoporphyrin.Burt, Trevor D; Seu, Lillian; Mold, Jeffrey E; Kappas, Attallah; McCune, Joseph MJournal of immunology (Baltimore, Md. : 1950)2010 Nov 15279-8820921523
In obesity and weight loss, all roads lead to the mighty macrophage.Red Eagle, Alex; Chawla, AjayThe Journal of clinical investigation2010 Oct3437-4020877005
Selective degradation of aggregate-prone CryAB mutants by HSPB1 is mediated by ubiquitin-proteasome pathways.Zhang, Huali; Rajasekaran, Namakkal S; Orosz, Andras; Xiao, Xianzhong; Rechsteiner, Martin; Benjamin, Ivor JJournal of molecular and cellular cardiology2010 Dec918-3020863832
Cellular response of polyvalent oligonucleotide-gold nanoparticle conjugates.Massich, Matthew D; Giljohann, David A; Schmucker, Abrin L; Patel, Pinal C; Mirkin, Chad AACS nano2010 Oct 265641-620860397
Using light to control signaling cascades in live neurons.Rana, Anshul; Dolmetsch, Ricardo ECurrent opinion in neurobiology2010 Oct617-2220850295
Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation.Dethlefsen, Les; Relman, David AProceedings of the National Academy of Sciences of the United States of America2011 Mar 154554-6120847294
Broadband plasmonic microlenses based on patches of nanoholes.Gao, Hanwei; Hyun, Jerome K; Lee, Min Hyung; Yang, Jiun-Chan; Lauhon, Lincoln J; Odom, Teri WNano letters2010 Oct 134111-620839781
A temperature-sensitive drug release system based on phase-change materials.Choi, Sung-Wook; Zhang, Yu; Xia, YounanAngewandte Chemie (International ed. in English)2010 Oct 187904-820839209
A zyxin-mediated mechanism for actin stress fiber maintenance and repair.Smith, Mark A; Blankman, Elizabeth; Gardel, Margaret L; Luettjohann, Laura; Waterman, Clare M; Beckerle, Mary CDevelopmental cell2010 Sep 14365-7620833360
Impact of delay in asthma diagnosis on health care service use.Lynch, Brian A; Van Norman, Chelsey A; Jacobson, Robert M; Weaver, Amy L; Juhn, Young JAllergy and asthma proceedings : the official journal of regional and state allergy societies.2010 Jul-Aug;e48-e5220819315
Characterization of the proteomes associating with three distinct membrane raft sub-types in murine sperm.Asano, Atsushi; Nelson, Jacquelyn L; Zhang, Sheng; Travis, Alexander JProteomics2010 Oct3494-50520815087
Bacterial charity work leads to population-wide resistance.Lee, Henry H; Molla, Michael N; Cantor, Charles R; Collins, James JNature2010 Sep 282-520811456
The potential functions of primary microRNAs in target recognition and repression.Trujillo, Robin Deis; Yue, Si-Biao; Tang, Yujie; O'Gorman, William E; Chen, Chang-ZhengThe EMBO journal2010 Oct 63272-8520808284
Transcription by the numbers redux: experiments and calculations that surprise.Garcia, Hernan G; Sanchez, Alvaro; Kuhlman, Thomas; Kondev, Jane; Phillips, RobTrends in cell biology2010 Dec723-3320801657
Strand-specific RNA sequencing reveals extensive regulated long antisense transcripts that are conserved across yeast species.Yassour, Moran; Pfiffner, Jenna; Levin, Joshua Z; Adiconis, Xian; Gnirke, Andreas; Nusbaum, Chad; Thompson, Dawn-Anne; Friedman, Nir; Regev, AvivGenome biology2010R8720796282
Nanoelectromechanical resonator arrays for ultrafast, gas-phase chromatographic chemical analysis.Li, Mo; Myers, E B; Tang, H X; Aldridge, S J; McCaig, H C; Whiting, J J; Simonson, R J; Lewis, N S; Roukes, M LNano letters2010 Oct 133899-90320795729
In vivo molecular photoacoustic tomography of melanomas targeted by bioconjugated gold nanocages.Kim, Chulhong; Cho, Eun Chul; Chen, Jingyi; Song, Kwang Hyun; Au, Leslie; Favazza, Christopher; Zhang, Qiang; Cobley, Claire M; Gao, Feng; Xia, Younan; Wang, Lihong VACS nano2010 Aug 244559-6420731439
Probing the micelle-bound aggregation-prone state of ýý-synuclein with (19)F NMR spectroscopy.Wang, Gui-Fang; Li, Conggang; Pielak, Gary JChembiochem : a European journal of chemical biology2010 Sep 241993-620730847
Conserved F-actin dynamics and force transmission at cell adhesions.Maruthamuthu, Venkat; Aratyn-Schaus, Yvonne; Gardel, Margaret LCurrent opinion in cell biology2010 Oct583-820728328
Chronic label-free volumetric photoacoustic microscopy of melanoma cells in three-dimensional porous scaffolds.Zhang, Yu; Cai, Xin; Choi, Sung-Wook; Kim, Chulhong; Wang, Lihong V; Xia, YounanBiomaterials2010 Nov8651-820727581
Multifactorial determinants of protein expression in prokaryotic open reading frames.Allert, Malin; Cox, J Colin; Hellinga, Homme WJournal of molecular biology2010 Oct 8905-1820727358
Just-so Stories: Vaccines, Autism, and the Single-bullet Disorder.Bearman, PeterSocial psychology quarterly.2009 Jun;112-11520721312
Complex function by design using spatially pre-structured synthetic microbial communities: degradation of pentachlorophenol in the presence of Hg(ii).Kim, Hyun Jung; Du, Wenbin; Ismagilov, Rustem FIntegrative biology : quantitative biosciences from nano to macro2011 Feb126-3320717565
Autonomous zinc-finger nuclease pairs for targeted chromosomal deletion.Sollu, Cem; Pars, Kaweh; Cornu, Tatjana I; Thibodeau-Beganny, Stacey; Maeder, Morgan L; Joung, J Keith; Heilbronn, Regine; Cathomen, ToniNucleic acids research2010 Dec8269-7620716517
Tracking, tuning, and terminating microbial physiology using synthetic riboregulators.Callura, Jarred M; Dwyer, Daniel J; Isaacs, Farren J; Cantor, Charles R; Collins, James JProceedings of the National Academy of Sciences of the United States of America2010 Sep 715898-90320713708
Ion-dependent dynamics of DNA ejections for bacteriophage lambda.Wu, David; Van Valen, David; Hu, Qicong; Phillips, RobBiophysical journal2010 Aug 91101-920712993
Comprehensive comparative analysis of strand-specific RNA sequencing methods.Levin, Joshua Z; Yassour, Moran; Adiconis, Xian; Nusbaum, Chad; Thompson, Dawn Anne; Friedman, Nir; Gnirke, Andreas; Regev, AvivNature methods2010 Sep709-1520711195
Towards A Fully Automated High-Throughput Phototransfection System.Cappelleri, David J; Halasz, Adam; Sul, Jai-Yoon; Kim, Tae Kyung; Eberwine, James; Kumar, VijayJALA (Charlottesville, Va.)2010 Aug 1329-34120706617
Three-dimensional, flexible nanoscale field-effect transistors as localized bioprobes.Tian, Bozhi; Cohen-Karni, Tzahi; Qing, Quan; Duan, Xiaojie; Xie, Ping; Lieber, Charles MScience (New York, N.Y.)2010 Aug 13830-420705858
Frequency domain detection of biomolecules using silicon nanowire biosensors.Zheng, Gengfeng; Gao, Xuan P A; Lieber, Charles MNano letters2010 Aug 113179-8320698634
Enhanced optical transmission mediated by localized plasmons in anisotropic, three-dimensional nanohole arrays.Yang, Jiun-Chan; Gao, Hanwei; Suh, Jae Yong; Zhou, Wei; Lee, Min Hyung; Odom, Teri WNano letters2010 Aug 113173-820698633
A custody battle for the mind: evidence for extensive imprinting in the brain.Tollkuhn, Jessica; Xu, Xiaohong; Shah, Nirao MNeuron2010 Aug 12359-6220696374
Radially aligned, electrospun nanofibers as dural substitutes for wound closure and tissue regeneration applications.Xie, Jingwei; Macewan, Matthew R; Ray, Wilson Z; Liu, Wenying; Siewe, Daku Y; Xia, YounanACS nano2010 Sep 285027-3620695478
Engineering single Cys2His2 zinc finger domains using a bacterial cell-based two-hybrid selection system.Thibodeau-Beganny, Stacey; Maeder, Morgan L; Joung, J KeithMethods in molecular biology (Clifton, N.J.)201031-5020680826
Reading chimpanzee faces: evidence for the role of verbal labels in categorical perception of emotion.Fugate, Jennifer M B; Gouzoules, Harold; Barrett, Lisa FeldmanEmotion (Washington, D.C.)2010 Aug544-5420677871
Synthetic receptors with antibody-like binding affinities.Kodadek, ThomasCurrent opinion in chemical biology2010 Dec713-2020674471
Development of antibody surrogates for the treatment of cancers and autoimmune disease.Kodadek, ThomasCurrent opinion in chemical biology2010 Dec721-720674470
A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response.Huarte, Maite; Guttman, Mitchell; Feldser, David; Garber, Manuel; Koziol, Magdalena J; Kenzelmann-Broz, Daniela; Khalil, Ahmad M; Zuk, Or; Amit, Ido; Rabani, Michal; Attardi, Laura D; Regev, Aviv; Lander, Eric S; Jacks, Tyler; Rinn, John LCell2010 Aug 6409-1920673990
Volume exclusion and soft interaction effects on protein stability under crowded conditions.Miklos, Andrew C; Li, Conggang; Sharaf, Naima G; Pielak, Gary JBiochemistry2010 Aug 246984-9120672856
Quantifying E. coli proteome and transcriptome with single-molecule sensitivity in single cells.Taniguchi, Yuichi; Choi, Paul J; Li, Gene-Wei; Chen, Huiyi; Babu, Mohan; Hearn, Jeremy; Emili, Andrew; Xie, X SunneyScience (New York, N.Y.)2010 Jul 30533-820671182
The virus as metabolic engineer.Maynard, Nathaniel D; Gutschow, Miriam V; Birch, Elsa W; Covert, Markus WBiotechnology journal2010 Jul686-9420665642
Steroid receptor coactivator-3 expression in lung cancer and its role in the regulation of cancer cell survival and proliferation.Cai, Di; Shames, David S; Raso, Maria Gabriela; Xie, Yang; Kim, Young H; Pollack, Jonathan R; Girard, Luc; Sullivan, James P; Gao, Boning; Peyton, Michael; Nanjundan, Meera; Byers, Lauren; Heymach, John; Mills, Gordon; Gazdar, Adi F; Wistuba, Ignacio; KodCancer research2010 Aug 156477-8520663904
Macromolecular crowding remodels the energy landscape of a protein by favoring a more compact unfolded state.Hong, Jiang; Gierasch, Lila MJournal of the American Chemical Society2010 Aug 410445-5220662522
Genome-wide analysis reveals mechanisms modulating autophagy in normal brain aging and in Alzheimer's disease.Lipinski, Marta M; Zheng, Bin; Lu, Tao; Yan, Zhenyu; Py, Benedicte F; Ng, Aylwin; Xavier, Ramnik J; Li, Cheng; Yankner, Bruce A; Scherzer, Clemens R; Yuan, JunyingProceedings of the National Academy of Sciences of the United States of America2010 Aug 1014164-920660724
Autonomous head-mounted electrophysiology systems for freely behaving primates.Gilja, Vikash; Chestek, Cindy A; Nuyujukian, Paul; Foster, Justin; Shenoy, Krishna VCurrent opinion in neurobiology2010 Oct676-8620655733
Electrospun nanofibers for neural tissue engineering.Xie, Jingwei; MacEwan, Matthew R; Schwartz, Andrea G; Xia, YounanNanoscale2010 Jan35-4420648362
Epigenetic memory in induced pluripotent stem cells.Kim, K; Doi, A; Wen, B; Ng, K; Zhao, R; Cahan, P; Kim, J; Aryee, M J; Ji, H; Ehrlich, L I R; Yabuuchi, A; Takeuchi, A; Cunniff, K C; Hongguang, H; McKinney-Freeman, S; Naveiras, O; Yoon, T J; Irizarry, R A; Jung, N; Seita, J; Hanna, J; Murakami, P; JaenisNature2010 Sep 16285-9020644535
Regulation of myeloid leukaemia by the cell-fate determinant Musashi.Ito, Takahiro; Kwon, Hyog Young; Zimdahl, Bryan; Congdon, Kendra L; Blum, Jordan; Lento, William E; Zhao, Chen; Lagoo, Anand; Gerrard, Gareth; Foroni, Letizia; Goldman, John; Goh, Harriet; Kim, Soo-Hyun; Kim, Dong-Wook; Chuah, Charles; Oehler, Vivian G; RNature2010 Aug 5765-820639863
Determinants of divergent adaptation and Dobzhansky-Muller interaction in experimental yeast populations.Anderson, James B; Funt, Jason; Thompson, Dawn Anne; Prabhu, Snehit; Socha, Amanda; Sirjusingh, Caroline; Dettman, Jeremy R; Parreiras, Lucas; Guttman, David S; Regev, Aviv; Kohn, Linda MCurrent biology : CB2010 Aug 101383-820637622
A forward-genetic screen and dynamic analysis of lambda phage host-dependencies reveals an extensive interaction network and a new anti-viral strategy.Maynard, Nathaniel D; Birch, Elsa W; Sanghvi, Jayodita C; Chen, Lu; Gutschow, Miriam V; Covert, Markus WPLoS genetics2010 Jule100101720628568
The role of nucleosome positioning in the evolution of gene regulation.Tsankov, Alexander M; Thompson, Dawn Anne; Socha, Amanda; Regev, Aviv; Rando, Oliver JPLoS biology2010e100041420625544
Automatic identification of fluorescently labeled brain cells for rapid functional imaging.Valmianski, Ilya; Shih, Andy Y; Driscoll, Jonathan D; Matthews, David W; Freund, Yoav; Kleinfeld, DavidJournal of neurophysiology.2010 Sep;1803-1120610792
Synthetic strategies for studying embryonic development.Ouyang, Xiaohu; Chen, James KChemistry & biology2010 Jun 25590-60620609409
Discrete time rescaling theorem: determining goodness of fit for discrete time statistical models of neural spiking.Haslinger, Robert; Pipa, Gordon; Brown, EmeryNeural computation2010 Oct2477-50620608868
Social demographic change and autism.Liu, Kayuet; Zerubavel, Noam; Bearman, PeterDemography2010 May327-4320608100
Discovery of a proneurogenic, neuroprotective chemical.Pieper, Andrew A; Xie, Shanhai; Capota, Emanuela; Estill, Sandi Jo; Zhong, Jeannie; Long, Jeffrey M; Becker, Ginger L; Huntington, Paula; Goldman, Shauna E; Shen, Ching-Han; Capota, Maria; Britt, Jeremiah K; Kotti, Tiina; Ure, Kerstin; Brat, Daniel J; WilCell2010 Jul 939-5120603013
Digital PCR on a SlipChip.Shen, Feng; Du, Wenbin; Kreutz, Jason E; Fok, Alice; Ismagilov, Rustem FLab on a chip2010 Oct 212666-7220596567
Genetic technologies. Synthetic "life," ethics, national security, and public discourse.Cho, Mildred K; Relman, David AScience (New York, N.Y.)2010 Jul 238-920595601
Facile synthesis of Ag nanocubes of 30 to 70 nm in edge length with CF(3)COOAg as a precursor.Zhang, Qiang; Li, Weiyang; Wen, Long-Ping; Chen, Jingyi; Xia, YounanChemistry (Weinheim an der Bergstrasse, Germany)2010 Sep 310234-920593441
Older and wiser? An affective science perspective on age-related challenges in financial decision making.Weierich, Mariann R; Kensinger, Elizabeth A; Munnell, Alicia H; Sass, Steven A; Dickerson, Brad C; Wright, Christopher I; Barrett, Lisa FeldmanSocial cognitive and affective neuroscience2011 Apr195-20620587596
Uniform beads with controllable pore sizes for biomedical applications.Choi, Sung-Wook; Yeh, Yi-Chun; Zhang, Yu; Sung, Hsing-Wen; Xia, YounanSmall (Weinheim an der Bergstrasse, Germany)2010 Jul 191492-820578116
Dead-end filling of SlipChip evaluated theoretically and experimentally as a function of the surface chemistry and the gap size between the plates for lubricated and dry SlipChips.Li, Liang; Karymov, Mikhail A; Nichols, Kevin P; Ismagilov, Rustem FLangmuir : the ACS journal of surfaces and colloids2010 Jul 2012465-7120575548
Engineering the genomes of wild insect populations: challenges, and opportunities provided by synthetic Medea selfish genetic elements.Hay, Bruce A; Chen, Chun-Hong; Ward, Catherine M; Huang, Haixia; Su, Jessica T; Guo, MingJournal of insect physiology2010 Oct1402-1320570677
Regulation of cell motile behavior by crosstalk between cadherin- and integrin-mediated adhesions.Borghi, Nicolas; Lowndes, Molly; Maruthamuthu, Venkat; Gardel, Margaret L; Nelson, W JamesProceedings of the National Academy of Sciences of the United States of America2010 Jul 2713324-920566866
Effects of proteins on protein diffusion.Wang, Yaqiang; Li, Conggang; Pielak, Gary JJournal of the American Chemical Society2010 Jul 149392-720560582
Affect as a Psychological Primitive.Barrett, Lisa Feldman; Bliss-Moreau, ElizaAdvances in experimental social psychology.2009;167-21820552040
Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity.Willner, Dana; Furlan, Mike; Schmieder, Robert; Grasis, Juris A; Pride, David T; Relman, David A; Angly, Florent E; McDole, Tracey; Mariella Jr, Ray P; Rohwer, Forest; Haynes, MatthewProceedings of the National Academy of Sciences of the United States of America2011 Mar 154547-5320547834
Bright three-photon luminescence from gold/silver alloyed nanostructures for bioimaging with negligible photothermal toxicity.Tong, Ling; Cobley, Claire M; Chen, Jingyi; Xia, Younan; Cheng, Ji-XinAngewandte Chemie (International ed. in English)2010 May 33485-820544899
Chemical stimulation of the Arabidopsis thaliana root using multi-laminar flow on a microfluidic chip.Meier, Matthias; Lucchetta, Elena M; Ismagilov, Rustem FLab on a chip2010 Aug 212147-5320544086
Transient frictional slip between integrin and the ECM in focal adhesions under myosin II tension.Aratyn-Schaus, Yvonne; Gardel, Margaret LCurrent biology : CB2010 Jul 131145-5320541412
Roles of monkey premotor neuron classes in movement preparation and execution.Kaufman, Matthew T; Churchland, Mark M; Santhanam, Gopal; Yu, Byron M; Afshar, Afsheen; Ryu, Stephen I; Shenoy, Krishna VJournal of neurophysiology2010 Aug799-81020538784
Differential involvement of excitatory and inhibitory neurons of cat motor cortex in coincident spike activity related to behavioral context.Putrino, David; Brown, Emery N; Mastaglia, Frank L; Ghosh, SoumyaThe Journal of neuroscience : the official journal of the Society for Neuroscience2010 Jun 98048-5620534853
Regulatory and metabolic rewiring during laboratory evolution of ethanol tolerance in E. coli.Goodarzi, Hani; Bennett, Bryson D; Amini, Sasan; Reaves, Marshall L; Hottes, Alison K; Rabinowitz, Joshua D; Tavazoie, SaeedMolecular systems biology2010 Jun 837820531407
Optimization of traction force microscopy for micron-sized focal adhesions.Stricker, Jonathan; Sabass, Benedikt; Schwarz, Ulrich S; Gardel, Margaret LJournal of physics. Condensed matter : an Institute of Physics journal2010 May 1919410420523913
Differential hemodynamic response in affective circuitry with aging: an FMRI study of novelty, valence, and arousal.Moriguchi, Yoshiya; Negreira, Alyson; Weierich, Mariann; Dautoff, Rebecca; Dickerson, Bradford C; Wright, Christopher I; Barrett, Lisa FeldmanJournal of cognitive neuroscience2011 May1027-4120521849
Lin28a transgenic mice manifest size and puberty phenotypes identified in human genetic association studies.Zhu, Hao; Shah, Samar; Shyh-Chang, Ng; Shinoda, Gen; Einhorn, William S; Viswanathan, Srinivas R; Takeuchi, Ayumu; Grasemann, Corinna; Rinn, John L; Lopez, Mary F; Hirschhorn, Joel N; Palmert, Mark R; Daley, George QNature genetics2010 Jul626-3020512147
Control of macrophage activation and function by PPARs.Chawla, AjayCirculation research2010 May 281559-6920508200
High frequency targeted mutagenesis in Arabidopsis thaliana using zinc finger nucleases.Zhang, Feng; Maeder, Morgan L; Unger-Wallace, Erica; Hoshaw, Justin P; Reyon, Deepak; Christian, Michelle; Li, Xiaohong; Pierick, Christopher J; Dobbs, Drena; Peterson, Thomas; Joung, J Keith; Voytas, Daniel FProceedings of the National Academy of Sciences of the United States of America2010 Jun 2912028-3320508152
Social influence and the autism epidemic.Liu, Ka-Yuet; King, Marissa; Bearman, Peter SAJS; American journal of sociology2010 Mar1387-43420503647
Dissolving Ag from Au-Ag Alloy Nanoboxes with H(2)O(2): A Method for Both Tailoring the Optical Properties and Measuring the H(2)O(2) Concentration.Zhang, Qiang; Cobley, Claire M; Zeng, Jie; Wen, Long-Ping; Chen, Jingyi; Xia, YounanThe journal of physical chemistry. C, Nanomaterials and interfaces2010 Mar 56396-640020495675
I Like the Sound of Your Voice: Affective Learning about Vocal Signals.Bliss-Moreau, Eliza; Barrett, Lisa Feldman; Owren, Michael JJournal of experimental social psychology.2010 May 1;557-56320495619
Establishing the design rules for DNA-mediated programmable colloidal crystallization.Macfarlane, Robert J; Jones, Matthew R; Senesi, Andrew J; Young, Kaylie L; Lee, Byeongdu; Wu, Jinsong; Mirkin, Chad AAngewandte Chemie (International ed. in English)2010 Jun 214589-9220486143
Tryptophan catabolism by indoleamine 2,3-dioxygenase 1 alters the balance of TH17 to regulatory T cells in HIV disease.Favre, David; Mold, Jeff; Hunt, Peter W; Kanwar, Bittoo; Loke, P'ng; Seu, Lillian; Barbour, Jason D; Lowe, Margaret M; Jayawardene, Anura; Aweeka, Francesca; Huang, Yong; Douek, Daniel C; Brenchley, Jason M; Martin, Jeffrey N; Hecht, Frederick M; Deeks, SScience translational medicine2010 May 1932ra3620484731
Conversion of a yeast prion protein to an infectious form in bacteria.Garrity, Sean J; Sivanathan, Viknesh; Dong, Jijun; Lindquist, Susan; Hochschild, AnnProceedings of the National Academy of Sciences of the United States of America2010 Jun 810596-60120484678
Microbial invasion of the amniotic cavity in preeclampsia as assessed by cultivation and sequence-based methods.DiGiulio, Daniel B; Gervasi, Mariateresa; Romero, Roberto; Mazaki-Tovi, Shali; Vaisbuch, Edi; Kusanovic, Juan Pedro; Seok, Kimberley S; Gomez, Ricardo; Mittal, Pooja; Gotsch, Francesca; Chaiworapongsa, Tinnakorn; Oyarzun, Enrique; Kim, Chong Jai; Relman, Journal of perinatal medicine2010 Sep503-1320482470
Microbial invasion of the amniotic cavity in pregnancies with small-for-gestational-age fetuses.DiGiulio, Daniel B; Gervasi, Maria Teresa; Romero, Roberto; Vaisbuch, Edi; Mazaki-Tovi, Shali; Kusanovic, Juan Pedro; Seok, Kimberley S; Gomez, Ricardo; Mittal, Pooja; Gotsch, Francesca; Chaiworapongsa, Tinnakorn; Oyarzun, Enrique; Kim, Chong Jai; Relman,Journal of perinatal medicine2010 Sep495-50220482466
Ostwald ripening of clusters during protein crystallization.Streets, Aaron M; Quake, Stephen RPhysical review letters2010 Apr 3017810220482145
Genetic structure in African populations: implications for human demographic history.Lambert, C A; Tishkoff, S ACold Spring Harbor symposia on quantitative biology2009395-40220453204
In vitro mineralization by preosteoblasts in poly(DL-lactide-co-glycolide) inverse opal scaffolds reinforced with hydroxyapatite nanoparticles.Choi, Sung-Wook; Zhang, Yu; Thomopoulos, Stavros; Xia, YounanLangmuir : the ACS journal of surfaces and colloids2010 Jul 2012126-3120450216
Inversion of product selectivity in an enzyme-inspired metallosupramolecular tweezer catalyzed epoxidation reaction.Ulmann, Pirmin A; Braunschweig, Adam B; Lee, One-Sun; Wiester, Michael J; Schatz, George C; Mirkin, Chad AChemical communications (Cambridge, England).2009 Sep 14;5121-320448966
Nanoliter multiplex PCR arrays on a SlipChip.Shen, Feng; Du, Wenbin; Davydova, Elena K; Karymov, Mikhail A; Pandey, Janmajay; Ismagilov, Rustem FAnalytical chemistry2010 Jun 14606-1220446698
Effects of thymic selection of the T-cell repertoire on HLA class I-associated control of HIV infection.Kosmrlj, Andrej; Read, Elizabeth L; Qi, Ying; Allen, Todd M; Altfeld, Marcus; Deeks, Steven G; Pereyra, Florencia; Carrington, Mary; Walker, Bruce D; Chakraborty, Arup KNature2010 May 20350-420445539
Colloquium paper: working toward a synthesis of archaeological, linguistic, and genetic data for inferring African population history.Scheinfeldt, Laura B; Soi, Sameer; Tishkoff, Sarah AProceedings of the National Academy of Sciences of the United States of America2010 May 118931-820445100
How antibiotics kill bacteria: from targets to networks.Kohanski, Michael A; Dwyer, Daniel J; Collins, James JNature reviews. Microbiology2010 Jun423-3520440275
Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs.Guttman, Mitchell; Garber, Manuel; Levin, Joshua Z; Donaghey, Julie; Robinson, James; Adiconis, Xian; Fan, Lin; Koziol, Magdalena J; Gnirke, Andreas; Nusbaum, Chad; Rinn, John L; Lander, Eric S; Regev, AvivNature biotechnology2010 May503-1020436462
Dynamic single-cell imaging of direct reprogramming reveals an early specifying event.Smith, Zachary D; Nachman, Iftach; Regev, Aviv; Meissner, AlexanderNature biotechnology2010 May521-620436460
ZiFiT (Zinc Finger Targeter): an updated zinc finger engineering tool.Sander, Jeffry D; Maeder, Morgan L; Reyon, Deepak; Voytas, Daniel F; Joung, J Keith; Dobbs, DrenaNucleic acids research2010 JulW462-820435679
The androgen receptor governs the execution, but not programming, of male sexual and territorial behaviors.Juntti, Scott A; Tollkuhn, Jessica; Wu, Melody V; Fraser, Eleanor J; Soderborg, Taylor; Tan, Stella; Honda, Shin-Ichiro; Harada, Nobuhiro; Shah, Nirao MNeuron2010 Apr 29260-7220435002
Optical Properties of Nested Pyramidal Nanoshells.Lin, Julia Y; Hasan, Warefta; Yang, Jiun-Chan; Odom, Teri WThe journal of physical chemistry. C, Nanomaterials and interfaces2010 Jan 87432-743520431688
Context is routinely encoded during emotion perception.Barrett, Lisa Feldman; Kensinger, Elizabeth APsychological science2010 Apr595-920424107
The miR-17-92 microRNA polycistron regulates MLL leukemia stem cell potential by modulating p21 expression.Wong, Piu; Iwasaki, Masayuki; Somervaille, Tim C P; Ficara, Francesca; Carico, Christine; Arnold, Christopher; Chen, Chang-Zheng; Cleary, Michael LCancer research2010 May 13833-4220406979
Unique physical properties and interactions of the domains of methylated DNA binding protein 2.Ghosh, Rajarshi P; Nikitina, Tatiana; Horowitz-Scherer, Rachel A; Gierasch, Lila M; Uversky, Vladimir N; Hite, Kristopher; Hansen, Jeffrey C; Woodcock, Christopher LBiochemistry2010 May 254395-41020405910
Gold nanoparticles for biology and medicine.Giljohann, David A; Seferos, Dwight S; Daniel, Weston L; Massich, Matthew D; Patel, Pinal C; Mirkin, Chad AAngewandte Chemie (International ed. in English)2010 Apr 263280-9420401880
Synthetic biology: applications come of age.Khalil, Ahmad S; Collins, James JNature reviews. Genetics2010 May367-7920395970
Oligonucleotide-based tools for studying zebrafish development.Shestopalov, Ilya A; Chen, James KZebrafish2010 Mar31-4020392138
Genome-wide dissection of microRNA functions and cotargeting networks using gene set signatures.Tsang, John S; Ebert, Margaret S; van Oudenaarden, AlexanderMolecular cell2010 Apr 9140-5320385095
RNA: state memory and mediator of cellular phenotype.Kim, Junhyong; Eberwine, JamesTrends in cell biology2010 Jun311-820382532
Understanding the SERS Effects of Single Silver Nanoparticles and Their Dimers, One at a Time.Rycenga, Matthew; Camargo, Pedro H C; Li, Weiyang; Moran, Christine H; Xia, YounanThe journal of physical chemistry letters2010 Feb 18696-70320368749
Targeting gold nanocages to cancer cells for photothermal destruction and drug delivery.Cobley, Claire M; Au, Leslie; Chen, Jingyi; Xia, YounanExpert opinion on drug delivery2010 May577-8720345327
Bacterial diversity in the oral cavity of 10 healthy individuals.Bik, Elisabeth M; Long, Clara Davis; Armitage, Gary C; Loomer, Peter; Emerson, Joanne; Mongodin, Emmanuel F; Nelson, Karen E; Gill, Steven R; Fraser-Liggett, Claire M; Relman, David AThe ISME journal2010 Aug962-7420336157
Neural mechanisms of ageing and cognitive decline.Bishop, Nicholas A; Lu, Tao; Yankner, Bruce ANature2010 Mar 25529-3520336135
Chromatin signature of embryonic pluripotency is established during genome activation.Vastenhouw, Nadine L; Zhang, Yong; Woods, Ian G; Imam, Farhad; Regev, Aviv; Liu, X Shirley; Rinn, John; Schier, Alexander FNature2010 Apr 8922-620336069
Navigational decision making in Drosophila thermotaxis.Luo, Linjiao; Gershow, Marc; Rosenzweig, Mark; Kang, Kyeongjin; Fang-Yen, Christopher; Garrity, Paul A; Samuel, Aravinthan D TThe Journal of neuroscience : the official journal of the Society for Neuroscience2010 Mar 244261-7220335462
SlipChip for immunoassays in nanoliter volumes.Liu, Weishan; Chen, Delai; Du, Wenbin; Nichols, Kevin P; Ismagilov, Rustem FAnalytical chemistry2010 Apr 153276-8220334360
Prevalence and diversity of microbes in the amniotic fluid, the fetal inflammatory response, and pregnancy outcome in women with preterm pre-labor rupture of membranes.DiGiulio, Daniel B; Romero, Roberto; Kusanovic, Juan Pedro; Gomez, Ricardo; Kim, Chong Jai; Seok, Kimberley S; Gotsch, Francesca; Mazaki-Tovi, Shali; Vaisbuch, Edi; Sanders, Katherine; Bik, Elisabeth M; Chaiworapongsa, Tinnakorn; Oyarzun, Enrique; Relman,American journal of reproductive immunology (New York, N.Y. : 1989)2010 Jul 138-5720331587
Analytical approaches to RNA profiling data for the identification of genes enriched in specific cells.Dougherty, Joseph D; Schmidt, Eric F; Nakajima, Miho; Heintz, NathanielNucleic acids research.2010 Jul;4218-3020308160
Production of Ag nanocubes on a scale of 0.1 g per batch by protecting the NaHS-mediated polyol synthesis with argon.Zhang, Qiang; Cobley, Claire; Au, Leslie; McKiernan, Maureen; Schwartz, Andrea; Wen, Long-Ping; Chen, Jingyi; Xia, YounanACS applied materials & interfaces2009 Sep2044-820305725
Seed-mediated synthesis of truncated gold decahedrons with a AuCl/oleylamine complex as precursor.Ma, Yanyun; Zeng, Jie; Li, Weiyang; McKiernan, Maureen; Xie, Zhaoxiong; Xia, YounanAdvanced materials (Deerfield Beach, Fla.)2010 May 41930-420301132
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium.Ma, Li-Jun; van der Does, H Charlotte; Borkovich, Katherine A; Coleman, Jeffrey J; Daboussi, Marie-Josee; Di Pietro, Antonio; Dufresne, Marie; Freitag, Michael; Grabherr, Manfred; Henrissat, Bernard; Houterman, Petra M; Kang, Seogchan; Shim, Won-Bo; WolosNature2010 Mar 18367-7320237561
Potent and selective photo-inactivation of proteins with peptoid-ruthenium conjugates.Lee, Jiyong; Udugamasooriya, D Gomika; Lim, Hyun-Suk; Kodadek, ThomasNature chemical biology2010 Apr258-6020228793
Gold nanocages as photothermal transducers for cancer treatment.Chen, Jingyi; Glaus, Charles; Laforest, Richard; Zhang, Qiang; Yang, Miaoxian; Gidding, Michael; Welch, Michael J; Xia, YounanSmall (Weinheim an der Bergstrasse, Germany)2010 Apr 9811-720225187
Reconstructing the Past: A Century of Ideas About Emotion in Psychology.Gendron, Maria; Barrett, Lisa FeldmanEmotion review : journal of the International Society for Research on Emotion.2009 Oct 1;316-33920221412
Variety is the spice of life: A psychological construction approach to understanding variability in emotion.Barrett, Lisa FeldmanCognition & emotion.2009 Nov 1;1284-130620221411
Visualization of JNK activity dynamics with a genetically encoded fluorescent biosensor.Fosbrink, Matthew; Aye-Han, Nwe-Nwe; Cheong, Raymond; Levchenko, Andre; Zhang, JinProceedings of the National Academy of Sciences of the United States of America2010 Mar 235459-6420212108
Gene duplication and the evolution of ribosomal protein gene regulation in yeast.Wapinski, Ilan; Pfiffner, Jenna; French, Courtney; Socha, Amanda; Thompson, Dawn Anne; Regev, AvivProceedings of the National Academy of Sciences of the United States of America2010 Mar 235505-1020212107
Measuring the SERS Enhancement Factors of Dimers with Different Structures Constructed from Silver Nanocubes.Camargo, Pedro H C; Au, Leslie; Rycenga, Matthew; Li, Weiyang; Xia, YounanChemical physics letters2010 Jan304-30820209069
Synthesis and Optical Properties of Cubic Gold Nanoframes.Au, Leslie; Chen, Yeechi; Zhou, Fei; Camargo, Pedro H C; Lim, Byungkwon; Li, Zhi-Yuan; Ginger, David S; Xia, YounanNano research2008 Dec 1441-44920200595
Picomole-scale characterization of protein stability and function by quantitative cysteine reactivity.Isom, Daniel G; Vardy, Eyal; Oas, Terrence G; Hellinga, Homme WProceedings of the National Academy of Sciences of the United States of America2010 Mar 164908-1320194783
Fabrication of Microbeads with a Controllable Hollow Interior and Porous Wall Using a Capillary Fluidic Device.Choi, Sung-Wook; Zhang, Yu; Xia, YounanAdvanced functional materials2009 Sep 232943-294920191106
Expression of the autoimmune susceptibility gene FcRL3 on human regulatory T cells is associated with dysfunction and high levels of programmed cell death-1.Swainson, Louise A; Mold, Jeff E; Bajpai, Urmila D; McCune, Joseph MJournal of immunology (Baltimore, Md. : 1950)2010 Apr 13639-4720190142
Microfluidic stochastic confinement enhances analysis of rare cells by isolating cells and creating high density environments for control of diffusible signals.Vincent, Meghan E; Liu, Weishan; Haney, Elizabeth B; Ismagilov, Rustem FChemical Society reviews2010 Mar974-8420179819
The evolution of human genetic and phenotypic variation in Africa.Campbell, Michael C; Tishkoff, Sarah ACurrent biology : CB2010 Feb 23R166-7320178763
Total synthesis of the polycyclic fungal metabolite (+/-)-communesin F.Liu, Peng; Seo, Jae Hong; Weinreb, Steven MAngewandte Chemie (International ed. in English)2010 Mar 82000-320175174
IFN-alpha-induced upregulation of CCR5 leads to expanded HIV tropism in vivo.Stoddart, Cheryl A; Keir, Mary E; McCune, Joseph MPLoS pathogens2010 Febe100076620174557
Stimulus onset quenches neural variability: a widespread cortical phenomenon.Churchland, Mark M; Yu, Byron M; Cunningham, John P; Sugrue, Leo P; Cohen, Marlene R; Corrado, Greg S; Newsome, William T; Clark, Andrew M; Hosseini, Paymon; Scott, Benjamin B; Bradley, David C; Smith, Matthew A; Kohn, Adam; Movshon, J Anthony; Armstrong,Nature neuroscience2010 Mar369-7820173745
Using point process models to compare neural spiking activity in the subthalamic nucleus of Parkinson's patients and a healthy primate.Sarma, Sridevi V; Eden, Uri T; Cheng, Ming L; Williams, Ziv M; Hu, Rollin; Eskandar, Emad; Brown, Emery NIEEE transactions on bio-medical engineering2010 Jun1297-30520172804
Characterizing nonlinear heartbeat dynamics within a point process framework.Chen, Zhe; Brown, Emery N; Barbieri, RiccardoIEEE transactions on bio-medical engineering2010 Jun1335-4720172783
Variability in gene expression underlies incomplete penetrance.Raj, Arjun; Rifkin, Scott A; Andersen, Erik; van Oudenaarden, AlexanderNature2010 Feb 18913-820164922
Telomere elongation in induced pluripotent stem cells from dyskeratosis congenita patients.Agarwal, Suneet; Loh, Yuin-Han; McLoughlin, Erin M; Huang, Junjiu; Park, In-Hyun; Miller, Justine D; Huo, Hongguang; Okuka, Maja; Dos Reis, Rosana Maria; Loewer, Sabine; Ng, Huck-Hui; Keefe, David L; Goldman, Frederick D; Klingelhutz, Aloysius J; Liu, LinNature2010 Mar 11292-620164838
Activity in the barrel cortex during active behavior and sleep.Vijayan, Sujith; Hale, Greg J; Moore, Christopher I; Brown, Emery N; Wilson, MatthewJournal of neurophysiology2010 Apr2074-8420164403
A SERS study of the molecular structure of alkanethiol monolayers on Ag nanocubes in the presence of aqueous glucose.Rycenga, Matthew; McLellan, Joseph M; Xia, YounanChemical physics letters2009 Sep 22166-17120160847
Sublethal antibiotic treatment leads to multidrug resistance via radical-induced mutagenesis.Kohanski, Michael A; DePristo, Mark A; Collins, James JMolecular cell2010 Feb 12311-2020159551
Tuning the Thickness and Orientation of Single Au Pyramids for Improved Refractive Index Sensitivities.Lee, Jeunghoon; Hasan, Warefta; Odom, Teri WThe journal of physical chemistry. C, Nanomaterials and interfaces2009 Feb 122205-220720157343
Phylogenetic analysis of developmental and postnatal mouse cell lineages.Salipante, Stephen J; Kas, Arnold; McMonagle, Eva; Horwitz, Marshall SEvolution & development2010 Jan-Feb84-9420156285
A simple spectroscopic method for differentiating cellular uptakes of gold nanospheres and nanorods from their mixtures.Cho, Eun Chul; Liu, Yang; Xia, YounanAngewandte Chemie (International ed. in English)2010 Mar 81976-8020146292
Seamless bead to microarray screening: rapid identification of the highest affinity protein ligands from large combinatorial libraries.Astle, John M; Simpson, Levi S; Huang, Yong; Reddy, M Muralidhar; Wilson, Rosemary; Connell, Steven; Wilson, Johnnie; Kodadek, ThomasChemistry & biology2010 Jan 2938-4520142039
Graphene and nanowire transistors for cellular interfaces and electrical recording.Cohen-Karni, Tzahi; Qing, Quan; Li, Qiang; Fang, Ying; Lieber, Charles MNano letters2010 Mar 101098-10220136098
Nanowire transistor arrays for mapping neural circuits in acute brain slices.Qing, Quan; Pal, Sumon K; Tian, Bozhi; Duan, Xiaojie; Timko, Brian P; Cohen-Karni, Tzahi; Murthy, Venkatesh N; Lieber, Charles MProceedings of the National Academy of Sciences of the United States of America2010 Feb 21882-720133836
Nature's molecular sponges: small heat shock proteins grow into their chaperone roles.Eyles, Stephen J; Gierasch, Lila MProceedings of the National Academy of Sciences of the United States of America2010 Feb 162727-820133678
Digital transcriptome profiling from attomole-level RNA samples.Ozsolak, Fatih; Goren, Alon; Gymrek, Melissa; Guttman, Mitchell; Regev, Aviv; Bernstein, Bradley E; Milos, Patrice MGenome research2010 Apr519-2520133332
Cytomegalovirus-specific T cells persist at very high levels during long-term antiretroviral treatment of HIV disease.Naeger, David M; Martin, Jeffrey N; Sinclair, Elizabeth; Hunt, Peter W; Bangsberg, David R; Hecht, Frederick; Hsue, Priscilla; McCune, Joseph M; Deeks, Steven GPloS one2010e888620126452
Genome editing with modularly assembled zinc-finger nucleases.Kim, Jin-Soo; Lee, Hyung Joo; Carroll, DanaNature methods2010 Feb91; author reply 91-220111032
Colorimetric Cu(2+) detection using DNA-modified gold-nanoparticle aggregates as probes and click chemistry.Xu, Xiaoyang; Daniel, Weston L; Wei, Wei; Mirkin, Chad ASmall (Weinheim an der Bergstrasse, Germany)2010 Mar 8623-620108231
The spatial structure of autism in California, 1993-2001.Mazumdar, Soumya; King, Marissa; Liu, Ka-Yuet; Zerubavel, Noam; Bearman, PeterHealth & place2010 May539-4620097113
Knockdown of Fanconi anemia genes in human embryonic stem cells reveals early developmental defects in the hematopoietic lineage.Tulpule, Asmin; Lensch, M William; Miller, Justine D; Austin, Karyn; D'Andrea, Alan; Schlaeger, Thorsten M; Shimamura, Akiko; Daley, George QBlood2010 Apr 293453-6220089964
Genome-wide patterns of population structure and admixture in West Africans and African Americans.Bryc, Katarzyna; Auton, Adam; Nelson, Matthew R; Oksenberg, Jorge R; Hauser, Stephen L; Williams, Scott; Froment, Alain; Bodo, Jean-Marie; Wambebe, Charles; Tishkoff, Sarah A; Bustamante, Carlos DProceedings of the National Academy of Sciences of the United States of America2010 Jan 12786-9120080753
Vertical silicon nanowires as a universal platform for delivering biomolecules into living cells.Shalek, Alex K; Robinson, Jacob T; Karp, Ethan S; Lee, Jin Seok; Ahn, Dae-Ro; Yoon, Myung-Han; Sutton, Amy; Jorgolli, Marsela; Gertner, Rona S; Gujral, Taranjit S; MacBeath, Gavin; Yang, Eun Gyeong; Park, HongkunProceedings of the National Academy of Sciences of the United States of America2010 Feb 21870-520080678
Estimated autism risk, older reproductive age, and parameterization.Durkin, Maureen S; Maenner, Matthew J; Newschaffer, Craig JAmerican journal of public health2010 Mar389-90; author reply 39020075308
A physical and regulatory map of host-influenza interactions reveals pathways in H1N1 infection.Shapira, Sagi D; Gat-Viks, Irit; Shum, Bennett O V; Dricot, Amelie; de Grace, Marciela M; Wu, Liguo; Gupta, Piyush B; Hao, Tong; Silver, Serena J; Root, David E; Hill, David E; Regev, Aviv; Hacohen, NirCell2009 Dec 241255-6720064372
Protein (19)F NMR in Escherichia coli.Li, Conggang; Wang, Gui-Fang; Wang, Yaqiang; Creager-Allen, Rachel; Lutz, Evan A; Scronce, Heidi; Slade, Kristin M; Ruf, Rebecca A S; Mehl, Ryan A; Pielak, Gary JJournal of the American Chemical Society2010 Jan 13321-720050707
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Growth landscape formed by perception and import of glucose in yeast.Youk, Hyun; van Oudenaarden, AlexanderNature2009 Dec 17875-920016593
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Putting Electrospun Nanofibers to Work for Biomedical Research.Xie, Jingwei; Li, Xiaoran; Xia, YounanMacromolecular rapid communications2008 Nov 191775-179220011452
Targeted mutagenesis in zebrafish using customized zinc-finger nucleases.Foley, Jonathan E; Maeder, Morgan L; Pearlberg, Joseph; Joung, J Keith; Peterson, Randall T; Yeh, Jing-Ruey JNature protocols20091855-6720010934
Next-generation synthetic gene networks.Lu, Timothy K; Khalil, Ahmad S; Collins, James JNature biotechnology2009 Dec1139-5020010597
Plant science. DNA binding made easy.Voytas, Daniel F; Joung, J KeithScience (New York, N.Y.)2009 Dec 111491-220007890
Revealing global regulatory perturbations across human cancers.Goodarzi, Hani; Elemento, Olivier; Tavazoie, SaeedMolecular cell2009 Dec 11900-1120005852
Hydroxyurea induces hydroxyl radical-mediated cell death in Escherichia coli.Davies, Bryan W; Kohanski, Michael A; Simmons, Lyle A; Winkler, Jonathan A; Collins, James J; Walker, Graham CMolecular cell2009 Dec 11845-6020005847
Multiparameter screening on SlipChip used for nanoliter protein crystallization combining free interface diffusion and microbatch methods.Li, Liang; Du, Wenbin; Ismagilov, Rustem FJournal of the American Chemical Society2010 Jan 13112-920000709
User-loaded SlipChip for equipment-free multiplexed nanoliter-scale experiments.Li, Liang; Du, Wenbin; Ismagilov, RustemJournal of the American Chemical Society2010 Jan 13106-1120000708
Controlling destiny through chemistry: small-molecule regulators of cell fate.Firestone, Ari J; Chen, James KACS chemical biology2010 Jan 1515-3420000447
Single-molecule study of DNA polymerization activity of HIV-1 reverse transcriptase on DNA templates.Kim, Sangjin; Schroeder, Charles M; Xie, X SunneyJournal of molecular biology2010 Feb 5995-100619968999
Synthesis of gold microplates using bovine serum albumin as a reductant and a stabilizer.Au, Leslie; Lim, Byungkwon; Colletti, Peter; Jun, Young-Shin; Xia, YounanChemistry, an Asian journal2010 Jan 4123-919967737
A regularized point process generalized linear model for assessing the functional connectivity in the cat motor cortex.Chen, Zhe; Putrino, David F; Ba, Demba E; Ghosh, Soumya; Barbieri, Riccardo; Brown, Emery NConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20095006-919965032
A statistical model for multiphoton calcium imaging of the brain.Malik, Wasim Q; Schummers, James; Sur, Mriganka; Brown, Emery NConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20097002-519964727
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A probabilistic framework for learning robust common spatial patterns.Wu, Wei; Chen, Zhe; Gao, Shangkai; Brown, Emery NConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20094658-6119963618
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Chromatin profiling by directly sequencing small quantities of immunoprecipitated DNA.Goren, Alon; Ozsolak, Fatih; Shoresh, Noam; Ku, Manching; Adli, Mazhar; Hart, Chris; Gymrek, Melissa; Zuk, Or; Regev, Aviv; Milos, Patrice M; Bernstein, Bradley ENature methods2010 Jan47-919946276
Targeting device therapy: genomics of sudden death.Frangiskakis, J Michael; London, BarryHeart failure clinics2010 Jan93-10019945065
Neonatal seizures: an update on mechanisms and management.Jensen, Frances EClinics in perinatology2009 Dec881-900, vii19944840
Etching and dimerization: a simple and versatile route to dimers of silver nanospheres with a range of sizes.Li, Weiyang; Camargo, Pedro H C; Au, Leslie; Zhang, Qiang; Rycenga, Matthew; Xia, YounanAngewandte Chemie (International ed. in English)2010164-819943304
Identification and characterization of a small molecule inhibitor of formin-mediated actin assembly.Rizvi, Syed A; Neidt, Erin M; Cui, Jiayue; Feiger, Zach; Skau, Colleen T; Gardel, Margaret L; Kozmin, Sergey A; Kovar, David RChemistry & biology2009 Nov 251158-6819942139
Isolation of antagonists of antigen-specific autoimmune T cell proliferation.Gocke, Anne R; Udugamasooriya, D Gomika; Archer, Chase T; Lee, Jiyong; Kodadek, ThomasChemistry & biology2009 Nov 251133-919942136
Clonal expansions in ulcerative colitis identify patients with neoplasia.Salk, Jesse J; Salipante, Stephen J; Risques, Rosa Ana; Crispin, David A; Li, Lin; Bronner, Mary P; Brentnall, Teresa A; Rabinovitch, Peter S; Horwitz, Marshall S; Loeb, Lawrence AProceedings of the National Academy of Sciences of the United States of America2009 Dec 820871-619926851
Fungal regulatory evolution: cis and trans in the balance.Thompson, Dawn Anne; Regev, AvivFEBS letters2009 Dec 173959-6519914250
Mechanics of the F-actin cytoskeleton.Stricker, Jonathan; Falzone, Tobias; Gardel, Margaret LJournal of biomechanics2010 Jan 59-1419913792
State-space algorithms for estimating spike rate functions.Smith, Anne C; Scalon, Joao D; Wirth, Sylvia; Yanike, Marianna; Suzuki, Wendy A; Brown, Emery NComputational intelligence and neuroscience201042653919911062
A bioreactor for in-cell protein NMR.Sharaf, Naima G; Barnes, Christopher O; Charlton, Lisa M; Young, Gregory B; Pielak, Gary JJournal of magnetic resonance (San Diego, Calif. : 1997)2010 Feb140-619910228
Autologous blood cell therapies from pluripotent stem cells.Lengerke, Claudia; Daley, George QBlood reviews2010 Jan27-3719910091
Subthreshold regime has the optimal sensitivity for nanowire FET biosensors.Gao, Xuan P A; Zheng, Gengfeng; Lieber, Charles MNano letters2010 Feb 10547-5219908823
Experience Sampling Methods: A Modern Idiographic Approach to Personality Research.Conner, Tamlin S; Tennen, Howard; Fleeson, William; Barrett, Lisa FeldmanSocial and personality psychology compass2009 May 1292-31319898679
Synthetic biology: understanding biological design from synthetic circuits.Mukherji, Shankar; van Oudenaarden, AlexanderNature reviews. Genetics2009 Dec859-7119898500
The neural basis of visual behaviors in the larval zebrafish.Portugues, Ruben; Engert, FlorianCurrent opinion in neurobiology.2009 Dec;644-719896836
Caenorhabditis elegans: a model system for systems neuroscience.Sengupta, Piali; Samuel, Aravinthan D TCurrent opinion in neurobiology2009 Dec637-4319896359
Single-crystalline kinked semiconductor nanowire superstructures.Tian, Bozhi; Xie, Ping; Kempa, Thomas J; Bell, David C; Lieber, Charles MNature nanotechnology2009 Dec824-919893521
Gold nanocages covered by smart polymers for controlled release with near-infrared light.Yavuz, Mustafa S; Cheng, Yiyun; Chen, Jingyi; Cobley, Claire M; Zhang, Qiang; Rycenga, Matthew; Xie, Jingwei; Kim, Chulhong; Song, Kwang H; Schwartz, Andrea G; Wang, Lihong V; Xia, YounanNature materials2009 Dec935-919881498
From elements to modules: regulatory evolution in Ascomycota fungi.Wohlbach, Dana J; Thompson, Dawn Anne; Gasch, Audrey P; Regev, AvivCurrent opinion in genetics & development2009 Dec571-819879128
Generation of functional human hepatic endoderm from human induced pluripotent stem cells.Sullivan, Gareth J; Hay, David C; Park, In-Hyun; Fletcher, Judy; Hannoun, Zara; Payne, Catherine M; Dalgetty, Donna; Black, James R; Ross, James A; Samuel, Kay; Wang, Gang; Daley, George Q; Lee, Je-Hyuk; Church, George M; Forbes, Stuart J; Iredale, John PHepatology (Baltimore, Md.)2010 Jan329-3519877180
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Insulin causes hyperthermia by direct inhibition of warm-sensitive neurons.Sanchez-Alavez, Manuel; Tabarean, Iustin V; Osborn, Olivia; Mitsukawa, Kayo; Schaefer, Jean; Dubins, Jeffrey; Holmberg, Kristina H; Klein, Izabella; Klaus, Joe; Gomez, Luis F; Kolb, Hartmuth; Secrest, James; Jochems, Jeanine; Myashiro, Kevin; Buckley, PetDiabetes2010 Jan43-5019846801
The Future of Psychology: Connecting Mind to Brain.Barrett, Lisa FeldmanPerspectives on psychological science : a journal of the Association for Psychological Science2009 Jul 1326-33919844601
Post-reductionist protein science, or putting Humpty Dumpty back together again.Gierasch, Lila M; Gershenson, AnneNature chemical biology2009 Nov774-719841622
Conductive Core-Sheath Nanofibers and Their Potential Application in Neural Tissue Engineering.Xie, Jingwei; Macewan, Matthew R; Willerth, Stephanie M; Li, Xiaoran; Moran, Daniel W; Sakiyama-Elbert, Shelly E; Xia, YounanAdvanced functional materials2009 Jul 242312-231819830261
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Using TIRF microscopy to quantify and confirm efficient mass transfer at the substrate surface of the chemistrode.Chen, Delai; Du, Wenbin; Ismagilov, Rustem FNew journal of physics20097501719809528
She's emotional. He's having a bad day: attributional explanations for emotion stereotypes.Barrett, Lisa Feldman; Bliss-Moreau, ElizaEmotion (Washington, D.C.)2009 Oct649-5819803587
SOX2 is an amplified lineage-survival oncogene in lung and esophageal squamous cell carcinomas.Bass, Adam J; Watanabe, Hideo; Mermel, Craig H; Yu, Soyoung; Perner, Sven; Verhaak, Roel G; Kim, So Young; Wardwell, Leslie; Tamayo, Pablo; Gat-Viks, Irit; Ramos, Alex H; Woo, Michele S; Weir, Barbara A; Getz, Gad; Beroukhim, Rameen; O'Kelly, Michael; DutNature genetics2009 Nov1238-4219801978
Induction of protein-protein interactions in live cells using light.Yazawa, Masayuki; Sadaghiani, Amir M; Hsueh, Brian; Dolmetsch, Ricardo ENature biotechnology.2009 Oct;941-519801976
Measuring the surface-enhanced Raman scattering enhancement factors of hot spots formed between an individual Ag nanowire and a single Ag nanocube.Camargo, Pedro H C; Cobley, Claire M; Rycenga, Matthew; Xia, YounanNanotechnology2009 Oct 2843402019801754
Structural analysis of semi-specific oligosaccharide recognition by a cellulose-binding protein of thermotoga maritima reveals adaptations for functional diversification of the oligopeptide periplasmic binding protein fold.Cuneo, Matthew J; Beese, Lorena S; Hellinga, Homme WThe Journal of biological chemistry2009 Nov 2733217-2319801540
Oligomerized pool engineering (OPEN): an 'open-source' protocol for making customized zinc-finger arrays.Maeder, Morgan L; Thibodeau-Beganny, Stacey; Sander, Jeffry D; Voytas, Daniel F; Joung, J KeithNature protocols20091471-50119798082
Novelty as a dimension in the affective brain.Weierich, Mariann R; Wright, Christopher I; Negreira, Alyson; Dickerson, Brad C; Barrett, Lisa FeldmanNeuroImage2010 Feb 12871-819796697
Hematopoietic development from human induced pluripotent stem cells.Lengerke, Claudia; Grauer, Matthias; Niebuhr, Nina I; Riedt, Tamara; Kanz, Lothar; Park, In-Hyun; Daley, George QAnnals of the New York Academy of Sciences2009 Sep219-2719796250
Trajectory approach to two-state kinetics of single particles on sculpted energy landscapes.Wu, David; Ghosh, Kingshuk; Inamdar, Mandar; Lee, Heun Jin; Fraser, Scott; Dill, Ken; Phillips, RobPhysical review letters2009 Jul 3105060319792475
Translational and rotational diffusion of a small globular protein under crowded conditions.Li, Conggang; Wang, Yaqiang; Pielak, Gary JThe journal of physical chemistry. B2009 Oct 813390-219791823
Altered development of glutamatergic synapses in layer V pyramidal neurons in NR3A knockout mice.Zhou, Chengwen; Jensen, Frances E; Sucher, Nikolaus JMolecular and cellular neurosciences2009 Dec419-2619782137
The importance of being earnestly selfish.Cheroutre, Hilde; Mucida, Daniel; Lambolez, FlorenceNature immunology2009 Oct1047-919767722
Plasmon-mediated synthesis of silver triangular bipyramids.Zhang, Jian; Li, Shuzhou; Wu, Jinsong; Schatz, George C; Mirkin, Chad AAngewandte Chemie (International ed. in English)20097787-9119760687
Endogenous nitric oxide protects bacteria against a wide spectrum of antibiotics.Gusarov, Ivan; Shatalin, Konstantin; Starodubtseva, Marina; Nudler, EvgenyScience (New York, N.Y.)2009 Sep 111380-419745150
Diagnostic change and the increased prevalence of autism.King, Marissa; Bearman, PeterInternational journal of epidemiology2009 Oct1224-3419737791
Multiplexed protein arrays enabled by polymer pen lithography: addressing the inking challenge.Zheng, Zijian; Daniel, Weston L; Giam, Louise R; Huo, Fengwei; Senesi, Andrew J; Zheng, Gengfeng; Mirkin, Chad AAngewandte Chemie (International ed. in English)20097626-919731290
Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses.Amit, Ido; Garber, Manuel; Chevrier, Nicolas; Leite, Ana Paula; Donner, Yoni; Eisenhaure, Thomas; Guttman, Mitchell; Grenier, Jennifer K; Li, Weibo; Zuk, Or; Schubert, Lisa A; Birditt, Brian; Shay, Tal; Goren, Alon; Zhang, Xiaolan; Smith, Zachary; DeeringScience (New York, N.Y.)2009 Oct 9257-6319729616
The many faces of repolarization instability: which one is prognostic?Shusterman, Vladimir; Lampert, Rachel; London, BarryJournal of electrocardiology2009 Nov-Dec511-619717165
Chitosan-Based Inverse Opals: Three-Dimensional Scaffolds with Uniform Pore Structures for Cell Culture.Choi, Sung-Wook; Xie, Jingwei; Xia, YounanAdvanced materials (Deerfield Beach, Fla.)2009 Apr 152997-300119710950
Generating coherent patterns of activity from chaotic neural networks.Sussillo, David; Abbott, L FNeuron2009 Aug 27544-5719709635
STIM1 and calmodulin interact with Orai1 to induce Ca2+-dependent inactivation of CRAC channels.Mullins, Franklin M; Park, Chan Young; Dolmetsch, Ricardo E; Lewis, Richard SProceedings of the National Academy of Sciences of the United States of America2009 Sep 815495-50019706428
Improving biomedical imaging with gold nanocages.Xia, Younan; Skrabalak, Sara ESPIE newsroom2008 May 121200705.113519704778
Nano-flares for mRNA regulation and detection.Prigodich, Andrew E; Seferos, Dwight S; Massich, Matthew D; Giljohann, David A; Lane, Brandon C; Mirkin, Chad AACS nano2009 Aug 252147-5219702321
Complementary electrical and spectroscopic detection assays with on-wire-lithography-based nanostructures.Zheng, Gengfeng; Chen, Xiaodong; Mirkin, Chad ASmall (Weinheim an der Bergstrasse, Germany)2009 Nov2537-4019697306
Measuring the Optical Absorption Cross Sections of Au-Ag Nanocages and Au Nanorods by Photoacoustic Imaging.Cho, Eun Chul; Kim, Chulhong; Zhou, Fei; Cobley, Claire M; Song, Kwang Hyun; Chen, Jingyi; Li, Zhi-Yuhan; Wang, Lihong V; Xia, YounanThe journal of physical chemistry. C, Nanomaterials and interfaces2009 May 289023-902819680423
Understanding the Mind by Measuring the Brain: Lessons From Measuring Behavior (Commentary on Vul et al., 2009).Barrett, Lisa FeldmanPerspectives on psychological science : a journal of the Association for Psychological Science2009314-31819672318
Single-molecule sequencing of an individual human genome.Pushkarev, Dmitry; Neff, Norma F; Quake, Stephen RNature biotechnology2009 Sep847-5019668243