Publications Search by Program
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The search results on this publication page are automated on a monthly schedule based on acknowledgement of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.
NIH Director's Pioneer Award Program (4177)
| Publication Title | Authors | Journal | Publication Date | Page No | PubMedID |
|---|---|---|---|---|---|
| Characterizing the oral and distal gut microbiota of the threatened southern sea otter (Enhydra lutris nereis) to enhance conservation practice. | Dudek, Natasha K; Switzer, Alexandra D; Costello, Elizabeth K; Murray, Michael J; Tomoleoni, Joseph A; Staedler, Michelle M; Tinker, M Tim; Relman, David A | Conservation science and practice | 2022 Apr | 35382031 | |
| Sex differences in stress-induced alcohol intake: a review of preclinical studies focused on amygdala and inflammatory pathways. | Mineur, Yann S; Garcia-Rivas, Vernon; Thomas, Merrilee A; Soares, Alexa R; McKee, Sherry A; Picciotto, Marina R | Psychopharmacology | 2022 Mar 31 | 35359158 | |
| Brain-like functional specialization emerges spontaneously in deep neural networks. | Dobs, Katharina; Martinez, Julio; Kell, Alexander J E; Kanwisher, Nancy | Science advances | 2022 Mar 18 | 35294241 | |
| Using child-friendly movie stimuli to study the development of face, place, and object regions from age 3 to 12 years. | Kamps, Frederik S; Richardson, Hilary; Murty, N Apurva Ratan; Kanwisher, Nancy; Saxe, Rebecca | Human brain mapping | 2022 Mar 11 | 35274789 | |
| Shared computational principles for language processing in humans and deep language models. | Goldstein, Ariel; Zada, Zaid; Buchnik, Eliav; Schain, Mariano; Price, Amy; Aubrey, Bobbi; Nastase, Samuel A; Feder, Amir; Emanuel, Dotan; Cohen, Alon; Jansen, Aren; Gazula, Harshvardhan; Choe, Gina; Rao, Aditi; Kim, Catherine; Casto, Colton; Fanda, Lora; Doyle, Werner; Friedman, Daniel; Dugan, Patricia; Melloni, Lucia; Reichart, Roi; Devore, Sasha; Flinker, Adeen; Hasenfratz, Liat; Levy, Omer; Hassidim, Avinatan; Brenner, Michael; Matias, Yossi; Norman, Kenneth A; Devinsky, Orrin; Hasson, Uri | Nature neuroscience | 2022 Mar | 35260860 | |
| Architecture and antigenicity of the Nipah virus attachment glycoprotein. | Wang, Zhaoqian; Amaya, Moushimi; Addetia, Amin; Dang, Ha V; Reggiano, Gabriella; Yan, Lianying; Hickey, Andrew C; DiMaio, Frank; Broder, Christopher C; Veesler, David | Science (New York, N.Y.) | 2022 03 25 | 35239409 | |
| A neural population selective for song in human auditory cortex. | Norman-Haignere, Sam V; Feather, Jenelle; Boebinger, Dana; Brunner, Peter; Ritaccio, Anthony; McDermott, Josh H; Schalk, Gerwin; Kanwisher, Nancy | Current biology : CB | 2022 Feb 18 | 35196507 | |
| The mechanism of RNA capping by SARS-CoV-2. | Tagliabracci, Vincent; Park, Gina; Osinski, Adam; Hernandez, Genaro; Eitson, Jennifer; Majumdar, Abir; Tonelli, Marco; Henzler-Wildman, Katherine; Pawłowski, Krzysztof; Chen, Zhe; Li, Yang; Schoggins, John | Research square | 2022 Feb 15 | 35194601 | |
| Self-Assembly of Antimicrobial Peptoids Impacts Their Biological Effects on ESKAPE Bacterial Pathogens. | Nielsen, Josefine Eilsø; Alford, Morgan Ashley; Yung, Deborah Bow Yue; Molchanova, Natalia; Fortkort, John A; Lin, Jennifer S; Diamond, Gill; Hancock, Robert E W; Jenssen, Håvard; Pletzer, Daniel; Lund, Reidar; Barron, Annelise E | ACS infectious diseases | 2022 03 11 | 35175731 | |
| Cytomegalovirus Infections in Ugandan Infants: Newborn-Mother Pairs, Neonates with Sepsis, and Infants with Hydrocephalus. | Hehnly, Christine; Ssentongo, Paddy; Bebell, Lisa M; Burgoine, Kathy; Bazira, Joel; Fronterre, Claudio; Kumbakumba, Elias; Mulondo, Ronald; Mbabazi-Kabachelor, Edith; Morton, Sarah U; Ngonzi, Joseph; Ochora, Moses; Olupot-Olupot, Peter; Onen, Justin; Robe | International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases | 2022 Feb 09 | 35150915 | |
| From start to finish-a molecular link in wound repair. | Yun, Sangwon; Greco, Valentina | Science (New York, N.Y.) | 2022 02 11 | 35143296 | |
| Cleavage of viral DNA by restriction endonucleases stimulates the type II CRISPR-Cas immune response. | Maguin, Pascal; Varble, Andrew; Modell, Joshua W; Marraffini, Luciano A | Molecular cell | 2022 Mar 03 | 35134339 | |
| A SARS-CoV-2 variant elicits an antibody response with a shifted immunodominance hierarchy. | Greaney, Allison J; Starr, Tyler N; Eguia, Rachel T; Loes, Andrea N; Khan, Khadija; Karim, Farina; Cele, Sandile; Bowen, John E; Logue, Jennifer K; Corti, Davide; Veesler, David; Chu, Helen Y; Sigal, Alex; Bloom, Jesse D | PLoS pathogens | 2022 02 | 35134084 | |
| Spatially resolved isotope tracing reveals tissue metabolic activity. | Wang, Lin; Xing, Xi; Zeng, Xianfeng; Jackson, S RaElle; TeSlaa, Tara; Al-Dalahmah, Osama; Samarah, Laith Z; Goodwin, Katharine; Yang, Lifeng; McReynolds, Melanie R; Li, Xiaoxuan; Wolff, Jeremy J; Rabinowitz, Joshua D; Davidson, Shawn M | Nature methods | 2022 02 | 35132243 | |
| SARS-CoV-2 breakthrough infections elicit potent, broad, and durable neutralizing antibody responses. | Walls, Alexandra C; Sprouse, Kaitlin R; Bowen, John E; Joshi, Anshu; Franko, Nicholas; Navarro, Mary Jane; Stewart, Cameron; Cameroni, Elisabetta; McCallum, Matthew; Goecker, Erin A; Degli-Angeli, Emily J; Logue, Jenni; Greninger, Alex; Corti, Davide; Chu | Cell | 2022 Jan 20 | 35123650 | |
| Structural changes in the SARS-CoV-2 spike E406W mutant escaping a clinical monoclonal antibody cocktail. | Addetia, Amin; Park, Young-Jun; Starr, Tyler; Greaney, Allison J; Sprouse, Kaitlin R; Bowen, John E; Tiles, Sasha W; Van Voorhis, Wesley C; Bloom, Jesse D; Corti, Davide; Walls, Alexandra C; Veesler, David | bioRxiv : the preprint server for biology | 2022 Jan 25 | 35118471 | |
| Sex and genetic background define the metabolic, physiologic, and molecular response to protein restriction. | Green, Cara L; Pak, Heidi H; Richardson, Nicole E; Flores, Victoria; Yu, Deyang; Tomasiewicz, Jay L; Dumas, Sabrina N; Kredell, Katherine; Fan, Jesse W; Kirsh, Charlie; Chaiyakul, Krittisak; Murphy, Michaela E; Babygirija, Reji; Barrett-Wilt, Gregory A; R | Cell metabolism | 2022 02 01 | 35108511 | |
| Altered TMPRSS2 usage by SARS-CoV-2 Omicron impacts infectivity and fusogenicity. | Meng, Bo; Abdullahi, Adam; Ferreira, Isabella A T M; Goonawardane, Niluka; Saito, Akatsuki; Kimura, Izumi; Yamasoba, Daichi; Gerber, Pehuén Pereyra; Fatihi, Saman; Rathore, Surabhi; Zepeda, Samantha K; Papa, Guido; Kemp, Steven A; Ikeda, Terumasa; Toyoda, Mako; Tan, Toong Seng; Kuramochi, Jin; Mitsunaga, Shigeki; Ueno, Takamasa; Shirakawa, Kotaro; Takaori-Kondo, Akifumi; Brevini, Teresa; Mallery, Donna L; Charles, Oscar J; CITIID-NIHR BioResource COVID-19 Collaboration; Genotype to Phenotype Japan (G2P-Japan) Consortium; Ecuador-COVID19 Consortium; Bowen, John E; Joshi, Anshu; Walls, Alexandra C; Jackson, Laurelle; Martin, Darren; Smith, Kenneth G C; Bradley, John; Briggs, John A G; Choi, Jinwook; Madissoon, Elo; Meyer, Kerstin B; Mlcochova, Petra; Ceron-Gutierrez, Lourdes; Doffinger, Rainer; Teichmann, Sarah A; Fisher, Andrew J; Pizzuto, Matteo S; de Marco, Anna; Corti, Davide; Hosmillo, Myra; Lee, Joo Hyeon; James, Leo C; Thukral, Lipi; Veesler, David; Sigal, Alex; Sampaziotis, Fotios; Goodfellow, Ian G; Matheson, Nicholas J; Sato, Kei; Gupta, Ravindra K | Nature | 2022 03 | 35104837 | |
| Delivery of AAV for Expression of Fluorescent Biosensors in Juvenile Mouse Hippocampus. | Bio-protocol | 2021 Dec 20 | 35087918 | ||
| History-dependent dopamine release increases cAMP levels in most basal amygdala glutamatergic neurons to control learning. | Lutas, Andrew; Fernando, Kayla; Zhang, Stephen X; Sambangi, Abhijeet; Andermann, Mark L | Cell reports | 2022 01 25 | 35081349 | |
| Structural basis of SARS-CoV-2 Omicron immune evasion and receptor engagement. | McCallum, Matthew; Czudnochowski, Nadine; Rosen, Laura E; Zepeda, Samantha K; Bowen, John E; Walls, Alexandra C; Hauser, Kevin; Joshi, Anshu; Stewart, Cameron; Dillen, Josh R; Powell, Abigail E; Croll, Tristan I; Nix, Jay; Virgin, Herbert W; Corti, Davide; Snell, Gyorgy; Veesler, David | Science (New York, N.Y.) | 2022 02 25 | 35076256 | |
| SARS-CoV-2 Omicron spike mediated immune escape and tropism shift. | Gupta, Ravindra | Research square | 2022 Jan 17 | 35075452 | |
| Separable structural requirements for cDNA synthesis, nontemplated extension, and template jumping by a non-LTR retroelement reverse transcriptase. | Pimentel, Sydney C; Upton, Heather E; Collins, Kathleen | The Journal of biological chemistry | 2022 Jan 21 | 35065960 | |
| Presynaptic autophagy is coupled to the synaptic vesicle cycle via ATG-9. | Neuron | 2022 Mar 02 | 35065714 | ||
| Circulating metabolite homeostasis achieved through mass action. | Li, Xiaoxuan; Hui, Sheng; Mirek, Emily T; Jonsson, William O; Anthony, Tracy G; Lee, Won Dong; Zeng, Xianfeng; Jang, Cholsoon; Rabinowitz, Joshua D | Nature metabolism | 2022 01 | 35058631 | |
| Internal senses of the vagus nerve. | Prescott, Sara L; Liberles, Stephen D | Neuron | 2022 Feb 16 | 35051375 | |
| Different modes of spacer acquisition by the Staphylococcus epidermidis type III-A CRISPR-Cas system. | Aviram, Naama; Thornal, Ashley N; Zeevi, David; Marraffini, Luciano A | Nucleic acids research | 2022 Feb 22 | 35048966 | |
| Injectable amnion hydrogel-mediated delivery of adipose-derived stem cells for osteoarthritis treatment. | Proceedings of the National Academy of Sciences of the United States of America | 2022 01 25 | 35046053 | ||
| Mild respiratory SARS-CoV-2 infection can cause multi-lineage cellular dysregulation and myelin loss in the brain. | Fernández-Castañeda, Anthony; Lu, Peiwen; Geraghty, Anna C; Song, Eric; Lee, Myoung-Hwa; Wood, Jamie; Yalçın, Belgin; Taylor, Kathryn R; Dutton, Selena; Acosta-Alvarez, Lehi; Ni, Lijun; Contreras-Esquivel, Daniel; Gehlhausen, Jeff R; Klein, Jon; Lucas, Ca | bioRxiv : the preprint server for biology | 2022 Jan 10 | 35043113 | |
| Neuronal subtype-specific growth cone and soma purification from mammalian CNS via fractionation and fluorescent sorting for subcellular analyses and spatial mapping of local transcriptomes and proteomes. | Engmann, Anne K; Hatch, John J; Nanda, Prakruti; Veeraraghavan, Priya; Ozkan, Abdulkadir; Poulopoulos, Alexandros; Murphy, Alexander J; Macklis, Jeffrey D | Nature protocols | 2022 Feb | 35022617 | |
| Broadly neutralizing antibodies overcome SARS-CoV-2 Omicron antigenic shift. | Cameroni, Elisabetta; Bowen, John E; Rosen, Laura E; Saliba, Christian; Zepeda, Samantha K; Culap, Katja; Pinto, Dora; VanBlargan, Laura A; De Marco, Anna; di Iulio, Julia; Zatta, Fabrizia; Kaiser, Hannah; Noack, Julia; Farhat, Nisar; Czudnochowski, Nadine; Havenar-Daughton, Colin; Sprouse, Kaitlin R; Dillen, Josh R; Powell, Abigail E; Chen, Alex; Maher, Cyrus; Yin, Li; Sun, David; Soriaga, Leah; Bassi, Jessica; Silacci-Fregni, Chiara; Gustafsson, Claes; Franko, Nicholas M; Logue, Jenni; Iqbal, Najeeha Talat; Mazzitelli, Ignacio; Geffner, Jorge; Grifantini, Renata; Chu, Helen; Gori, Andrea; Riva, Agostino; Giannini, Olivier; Ceschi, Alessandro; Ferrari, Paolo; Cippà, Pietro E; Franzetti-Pellanda, Alessandra; Garzoni, Christian; Halfmann, Peter J; Kawaoka, Yoshihiro; Hebner, Christy; Purcell, Lisa A; Piccoli, Luca; Pizzuto, Matteo Samuele; Walls, Alexandra C; Diamond, Michael S; Telenti, Amalio; Virgin, Herbert W; Lanzavecchia, Antonio; Snell, Gyorgy; Veesler, David; Corti, Davide | Nature | 2022 02 | 35016195 | |
| Ligament Regenerative Engineering: Braiding Scalable and Tunable Bioengineered Ligaments Using a Bench-Top Braiding Machine. | Mengsteab, Paulos Y; Freeman, Joseph; Barajaa, Mohammed A; Nair, Lakshmi S; Laurencin, Cato T | Regenerative engineering and translational medicine | 2021 Dec | 35005216 | |
| The Role of Nanomaterials and Biological Agents on Rotator Cuff Regeneration. | Washington, Kenyatta S; Shemshaki, Nikoo Saveh; Laurencin, Cato T | Regenerative engineering and translational medicine | 2021 Dec | 35005215 | |
| Neural systems that facilitate the representation of social rank. | Dwortz, Madeleine F; Curley, James P; Tye, Kay M; Padilla-Coreano, Nancy | Philosophical transactions of the Royal Society of London. Series B, Biological sciences | 2022 Feb 28 | 35000438 | |
| Antibody-mediated broad sarbecovirus neutralization through ACE2 molecular mimicry. | Park, Young-Jun; De Marco, Anna; Starr, Tyler N; Liu, Zhuoming; Pinto, Dora; Walls, Alexandra C; Zatta, Fabrizia; Zepeda, Samantha K; Bowen, John E; Sprouse, Kaitlin R; Joshi, Anshu; Giurdanella, Martina; Guarino, Barbara; Noack, Julia; Abdelnabi, Rana; F | Science (New York, N.Y.) | 2022 01 28 | 34990214 | |
| The synthetic artificial stem cell (SASC): Shifting the paradigm of cell therapy in regenerative engineering. | Shah, Shiv; Esdaille, Caldon Jayson; Bhattacharjee, Maumita; Kan, Ho-Man; Laurencin, Cato T | Proceedings of the National Academy of Sciences of the United States of America | 2022 01 11 | 34987101 | |
| Chemically induced protein cage assembly with programmable opening and cargo release. | Stupka, Izabela; Azuma, Yusuke; Biela, Artur P; Imamura, Motonori; Scheuring, Simon; Pyza, Elżbieta; Woźnicka, Olga; Maskell, Daniel P; Heddle, Jonathan G | Science advances | 2022 Jan 07 | 34985943 | |
| SARS-CoV-2 spike conformation determines plasma neutralizing activity. | Bowen, John E; Walls, Alexandra C; Joshi, Anshu; Sprouse, Kaitlin R; Stewart, Cameron; Tortorici, M Alejandra; Franko, Nicholas M; Logue, Jennifer K; Mazzitelli, Ignacio G; Tiles, Sasha W; Ahmed, Kumail; Shariq, Asefa; Snell, Gyorgy; Iqbal, Najeeha Talat; | bioRxiv : the preprint server for biology | 2021 Dec 21 | 34981060 | |
| Delta breakthrough infections elicit potent, broad and durable neutralizing antibody responses. | Walls, Alexandra C; Sprouse, Kaitlin R; Joshi, Anshu; Bowen, John E; Franko, Nicholas; Navarro, Mary Jane; Stewart, Cameron; McCallum, Matthew; Goecker, Erin A; Degli-Angeli, Emily J; Logue, Jenni; Greninger, Alex; Chu, Helen; Veesler, David | bioRxiv : the preprint server for biology | 2021 Dec 13 | 34931192 | |
| Complete biosynthesis of the bisbenzylisoquinoline alkaloids guattegaumerine and berbamunine in yeast. | Payne, James T; Valentic, Timothy R; Smolke, Christina D | Proceedings of the National Academy of Sciences of the United States of America | 2021 12 21 | 34903659 | |
| Single molecule kinetics of bacteriorhodopsin by HS-AFM. | Perrino, Alma P; Miyagi, Atsushi; Scheuring, Simon | Nature communications | 2021 12 10 | 34893646 | |
| Dynamic eIF3a O-GlcNAcylation controls translation reinitiation during nutrient stress. | Shu, Xin Erica; Mao, Yuanhui; Jia, Longfei; Qian, Shu-Bing | Nature chemical biology | 2022 02 | 34887587 | |
| NLRP3 cages revealed by full-length mouse NLRP3 structure control pathway activation. | Andreeva, Liudmila; David, Liron; Rawson, Shaun; Shen, Chen; Pasricha, Teerithveen; Pelegrin, Pablo; Wu, Hao | Cell | 2021 12 22 | 34861190 | |
| DDX17 is an essential mediator of sterile NLRC4 inflammasome activation by retrotransposon RNAs. | Wang, Shao-Bin; Narendran, Siddharth; Hirahara, Shuichiro; Varshney, Akhil; Pereira, Felipe; Apicella, Ivana; Ambati, Meenakshi; Ambati, Vidya L; Yerramothu, Praveen; Ambati, Kameshwari; Nagasaka, Yosuke; Argyle, Dionne; Huang, Peirong; Baker, Kirstie L; | Science immunology | 2021 12 03 | 34860583 | |
| Biomaterials direct functional B cell response in a material-specific manner. | Moore, Erika M; Maestas Jr, David R; Cherry, Chris C; Garcia, Jordan A; Comeau, Hannah Y; Davenport Huyer, Locke; Kelly, Sean H; Peña, Alexis N; Blosser, Richard L; Rosson, Gedge D; Elisseeff, Jennifer H | Science advances | 2021 Dec 03 | 34851674 | |
| Cooperative defenses during enteropathogenic infection. | Troha, Katia; Ayres, Janelle S | Current opinion in microbiology | 2022 Feb | 34847524 | |
| Serine catabolism generates liver NADPH and supports hepatic lipogenesis. | Zhang, Zhaoyue; TeSlaa, Tara; Xu, Xincheng; Zeng, Xianfeng; Yang, Lifeng; Xing, Gang; Tesz, Gregory J; Clasquin, Michelle F; Rabinowitz, Joshua D | Nature metabolism | 2021 12 | 34845393 | |
| Multiview confocal super-resolution microscopy. | Wu, Yicong; Han, Xiaofei; Su, Yijun; Glidewell, Melissa; Daniels, Jonathan S; Liu, Jiamin; Sengupta, Titas; Rey-Suarez, Ivan; Fischer, Robert; Patel, Akshay; Combs, Christian; Sun, Junhui; Wu, Xufeng; Christensen, Ryan; Smith, Corey; Bao, Lingyu; Sun, Yil | Nature | 2021 12 | 34837071 | |
| Prophage integration into CRISPR loci enables evasion of antiviral immunity in Streptococcus pyogenes. | Varble, Andrew; Campisi, Edmondo; Euler, Chad W; Maguin, Pascal; Kozlova, Albina; Fyodorova, Jessica; Rostøl, Jakob T; Fischetti, Vincent A; Marraffini, Luciano A | Nature microbiology | 2021 12 | 34819640 | |
| swdpwr: A SAS macro and an R package for power calculations in stepped wedge cluster randomized trials. | Chen, Jiachen; Zhou, Xin; Li, Fan; Spiegelman, Donna | Computer methods and programs in biomedicine | 2022 Jan | 34818620 | |
| Cellular origins of dsRNA, their recognition and consequences. | Chen, Y Grace; Hur, Sun | Nature reviews. Molecular cell biology | 2022 Apr | 34815573 | |
| Estimating the natural indirect effect and the mediation proportion via the product method. | Cheng, Chao; Spiegelman, Donna; Li, Fan | BMC medical research methodology | 2021 Nov 20 | 34800985 | |
| Methionine synthase supports tumour tetrahydrofolate pools. | Ghergurovich, Jonathan M; Xu, Xincheng; Wang, Joshua Z; Yang, Lifeng; Ryseck, Rolf-Peter; Wang, Lin; Rabinowitz, Joshua D | Nature metabolism | 2021 11 | 34799699 | |
| Ileitis-associated tertiary lymphoid organs arise at lymphatic valves and impede mesenteric lymph flow in response to tumor necrosis factor. | Czepielewski, Rafael S; Erlich, Emma C; Onufer, Emily J; Young, Shannon; Saunders, Brian T; Han, Yong-Hyun; Wohltmann, Mary; Wang, Peter L; Kim, Ki-Wook; Kumar, Shashi; Hsieh, Chyi-Song; Scallan, Joshua P; Yang, Ying; Zinselmeyer, Bernd H; Davis, Michael | Immunity | 2021 12 14 | 34788601 | |
| Selective responses to faces, scenes, and bodies in the ventral visual pathway of infants. | Kosakowski, Heather L; Cohen, Michael A; Takahashi, Atsushi; Keil, Boris; Kanwisher, Nancy; Saxe, Rebecca | Current biology : CB | 2022 Jan 24 | 34784506 | |
| Differential adhesion regulates neurite placement via a retrograde zippering mechanism. | Sengupta, Titas; Koonce, Noelle L; Vázquez-Martínez, Nabor; Moyle, Mark W; Duncan, Leighton H; Emerson, Sarah E; Han, Xiaofei; Shao, Lin; Wu, Yicong; Santella, Anthony; Fan, Li; Bao, Zhirong; Mohler, William A; Shroff, Hari; Colón-Ramos, Daniel A | eLife | 2021 11 16 | 34783657 | |
| Bi-directional ribosome scanning controls the stringency of start codon selection. | Gu, Yifei; Mao, Yuanhui; Jia, Longfei; Dong, Leiming; Qian, Shu-Bing | Nature communications | 2021 11 15 | 34782646 | |
| Defining genome-wide CRISPR-Cas genome-editing nuclease activity with GUIDE-seq. | Malinin, Nikolay L; Lee, GaHyun; Lazzarotto, Cicera R; Li, Yichao; Zheng, Zongli; Nguyen, Nhu T; Liebers, Matthew; Topkar, Ved V; Iafrate, A John; Le, Long P; Aryee, Martin J; Joung, J Keith; Tsai, Shengdar Q | Nature protocols | 2021 Nov 12 | 34773119 | |
| Spatial dispersion analysis of LGE-CMR for prediction of ventricular arrhythmias in patients with cardiac sarcoidosis. | Aronis, Konstantinos N; Okada, David R; Xie, Eric; Daimee, Usama A; Prakosa, Adityo; Gilotra, Nisha A; Wu, Katherine C; Trayanova, Natalia; Chrispin, Jonathan | Pacing and clinical electrophysiology : PACE | 2021 Dec | 34766627 | |
| A data-driven framework for mapping domains of human neurobiology. | Beam, Elizabeth; Potts, Christopher; Poldrack, Russell A; Etkin, Amit | Nature neuroscience | 2021 Dec | 34764476 | |
| Impact of the Affordable Care Act on Colorectal Cancer Incidence and Mortality. | Lee, Catherine; Kushi, Lawrence H; Reed, Mary E; Eldridge, Elizabeth H; Lee, Jeffrey K; Zhang, Jie; Spiegelman, Donna | American journal of preventive medicine | 2022 Mar | 34763959 | |
| Current and future techniques for detecting oxytocin: Focusing on genetically-encoded GPCR sensors. | Lee, Dongmin; Kwon, Hyung-Bae | Journal of neuroscience methods | 2022 01 15 | 34763021 | |
| Unsupervised deep learning identifies semantic disentanglement in single inferotemporal face patch neurons. | Higgins, Irina; Chang, Le; Langston, Victoria; Hassabis, Demis; Summerfield, Christopher; Tsao, Doris; Botvinick, Matthew | Nature communications | 2021 11 09 | 34753913 | |
| Molecular basis of immune evasion by the Delta and Kappa SARS-CoV-2 variants. | McCallum, Matthew; Walls, Alexandra C; Sprouse, Kaitlin R; Bowen, John E; Rosen, Laura E; Dang, Ha V; De Marco, Anna; Franko, Nicholas; Tilles, Sasha W; Logue, Jennifer; Miranda, Marcos C; Ahlrichs, Margaret; Carter, Lauren; Snell, Gyorgy; Pizzuto, Matteo | Science (New York, N.Y.) | 2021 12 24 | 34751595 | |
| CHARMING: Harmonizing synonymous codon usage to replicate a desired codon usage pattern. | Wright, Gabriel; Rodriguez, Anabel; Li, Jun; Milenkovic, Tijana; Emrich, Scott J; Clark, Patricia L | Protein science : a publication of the Protein Society | 2021 Nov 04 | 34738275 | |
| Integrator enforces the fidelity of transcriptional termination at protein-coding genes. | Dasilva, Lucas Ferreira; Blumenthal, Ezra; Beckedorff, Felipe; Cingaram, Pradeep Reddy; Gomes Dos Santos, Helena; Edupuganti, Raghu Ram; Zhang, Anda; Dokaneheifard, Sadat; Aoi, Yuki; Yue, Jingyin; Kirstein, Nina; Tayari, Mina Masoumeh; Shilatifard, Ali; Shiekhattar, Ramin | Science advances | 2021 Nov 05 | 34730992 | |
| Development of a Rapid and Sensitive CasRx-Based Diagnostic Assay for SARS-CoV-2. | Brogan, Daniel J; Chaverra-Rodriguez, Duverney; Lin, Calvin P; Smidler, Andrea L; Yang, Ting; Alcantara, Lenissa M; Antoshechkin, Igor; Liu, Junru; Raban, Robyn R; Belda-Ferre, Pedro; Knight, Rob; Komives, Elizabeth A; Akbari, Omar S | ACS sensors | 2021 11 26 | 34714054 | |
| Disulfiram use is associated with lower risk of COVID-19: A retrospective cohort study. | Fillmore, Nathanael; Bell, Steven; Shen, Ciyue; Nguyen, Vinh; La, Jennifer; Dubreuil, Maureen; Strymish, Judith; Brophy, Mary; Mehta, Gautam; Wu, Hao; Lieberman, Judy; Do, Nhan; Sander, Chris | PloS one | 2021 | 34710137 | |
| A non-canonical, interferon-independent signaling activity of cGAMP triggers DNA damage response signaling. | Banerjee, Daipayan; Langberg, Kurt; Abbas, Salar; Odermatt, Eric; Yerramothu, Praveen; Volaric, Martin; Reidenbach, Matthew A; Krentz, Kathy J; Rubinstein, C Dustin; Brautigan, David L; Abbas, Tarek; Gelfand, Bradley D; Ambati, Jayakrishna; Kerur, Nagaraj | Nature communications | 2021 10 27 | 34707113 | |
| A working model for condensate RNA-binding proteins as matchmakers for protein complex assembly. | Chen, Xiuzhen; Mayr, Christine | RNA (New York, N.Y.) | 2021 Oct 27 | 34706978 | |
| GCN2 adapts protein synthesis to scavenging-dependent growth. | Nofal, Michel; Wang, Tim; Yang, Lifeng; Jankowski, Connor S R; Hsin-Jung Li, Sophia; Han, Seunghun; Parsons, Lance; Frese, Alexander N; Gitai, Zemer; Anthony, Tracy G; Wühr, Martin; Sabatini, David M; Rabinowitz, Joshua D | Cell systems | 2022 Feb 16 | 34706266 | |
| Repeated hippocampal seizures lead to brain-wide reorganization of circuits and seizure propagation pathways. | Choy, ManKin; Dadgar-Kiani, Ehsan; Cron, Greg O; Duffy, Ben A; Schmid, Florian; Edelman, Bradley J; Asaad, Mazen; Chan, Russell W; Vahdat, Shahabeddin; Lee, Jin Hyung | Neuron | 2022 01 19 | 34706219 | |
| Ribonuclease recruitment using a small molecule reduced c9ALS/FTD r(G4C2) repeat expansion in vitro and in vivo ALS models. | Bush, Jessica A; Aikawa, Haruo; Fuerst, Rita; Li, Yue; Ursu, Andrei; Meyer, Samantha M; Benhamou, Raphael I; Chen, Jonathan L; Khan, Tanya; Wagner-Griffin, Sarah; Van Meter, Montina J; Tong, Yuquan; Olafson, Hailey; McKee, Kendra K; Childs-Disney, Jessica L; Gendron, Tania F; Zhang, Yongjie; Coyne, Alyssa N; Wang, Eric T; Yildirim, Ilyas; Wang, Kye Won; Petrucelli, Leonard; Rothstein, Jeffrey D; Disney, Matthew D | Science translational medicine | 2021 10 27 | 34705518 | |
| Crim1 and Kelch-like 14 exert complementary dual-directional developmental control over segmentally specific corticospinal axon projection targeting. | Sahni, Vibhu; Itoh, Yasuhiro; Shnider, Sara J; Macklis, Jeffrey D | Cell reports | 2021 Oct 19 | 34686337 | |
| Corticospinal neuron subpopulation-specific developmental genes prospectively indicate mature segmentally specific axon projection targeting. | Sahni, Vibhu; Shnider, Sara J; Jabaudon, Denis; Song, Janet H T; Itoh, Yasuhiro; Greig, Luciano C; Macklis, Jeffrey D | Cell reports | 2021 10 19 | 34686320 | |
| Phase separation drives RNA virus-induced activation of the NLRP6 inflammasome. | Shen, Chen; Li, Runzhi; Negro, Roberto; Cheng, Jiewei; Vora, Setu M; Fu, Tian-Min; Wang, Anmin; He, Kaixin; Andreeva, Liudmila; Gao, Pu; Tian, Zhigang; Flavell, Richard A; Zhu, Shu; Wu, Hao | Cell | 2021 Nov 11 | 34678144 | |
| Immunogenicity of In Vitro-Transcribed RNA. | Mu, Xin; Hur, Sun | Accounts of chemical research | 2021 11 02 | 34677064 | |
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| STING condensates on ER limit IFN response. | Andreeva, Liudmila; Wu, Hao | Nature cell biology | 2021 04 | 33833430 | |
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| The Treatment of Muscle Atrophy after Rotator Cuff Tears Using Electroconductive Nanofibrous Matrices. | Tang, Xiaoyan; Shemshaki, Nikoo Saveh; Vernekar, Varadraj N; Prabhath, Anupama; Kuyinu, Emmanuel; Kan, Ho-Man; Barajaa, Mohammed; Khan, Yusuf; Laurencin, Cato T | Regenerative engineering and translational medicine | 2021 Mar | 33816776 | |
| Functional Analysis of the Fusion and Attachment Glycoproteins of Mojiang Henipavirus. | Cheliout Da Silva, Sofia; Yan, Lianying; Dang, Ha V; Xu, Kai; Epstein, Jonathan H; Veesler, David; Broder, Christopher C | Viruses | 2021 03 22 | 33809833 | |
| Potent Antiviral Activity against HSV-1 and SARS-CoV-2 by Antimicrobial Peptoids. | Diamond, Gill; Molchanova, Natalia; Herlan, Claudine; Fortkort, John A; Lin, Jennifer S; Figgins, Erika; Bopp, Nathen; Ryan, Lisa K; Chung, Donghoon; Adcock, Robert Scott; Sherman, Michael; Barron, Annelise E | Pharmaceuticals (Basel, Switzerland) | 2021 Mar 31 | 33807248 | |
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| In Vivo Evaluation of the Regenerative Capability of Glycylglycine Ethyl Ester-Substituted Polyphosphazene and Poly(lactic-co-glycolic acid) Blends: A Rabbit Critical-Sized Bone Defect Model. | Ogueri, Kenneth S; Ogueri, Kennedy S; McClinton, Aneesah; Kan, Ho-Man; Ude, Chinedu C; Barajaa, Mohammed A; Allcock, Harry R; Laurencin, Cato T | ACS biomaterials science & engineering | 2021 04 12 | 33792283 | |
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| Neural alignment predicts learning outcomes in students taking an introduction to computer science course. | Meshulam, Meir; Hasenfratz, Liat; Hillman, Hanna; Liu, Yun-Fei; Nguyen, Mai; Norman, Kenneth A; Hasson, Uri | Nature communications | 2021 03 26 | 33771999 | |
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| Neuropeptide F signaling regulates parasitoid-specific germline development and egg-laying in Drosophila. | Sadanandappa, Madhumala K; Sathyanarayana, Shivaprasad H; Kondo, Shu; Bosco, Giovanni | PLoS genetics | 2021 Mar | 33770070 | |
| Quadrivalent influenza nanoparticle vaccines induce broad protection. | Boyoglu-Barnum, Seyhan; Ellis, Daniel; Gillespie, Rebecca A; Hutchinson, Geoffrey B; Park, Young-Jun; Moin, Syed M; Acton, Oliver J; Ravichandran, Rashmi; Murphy, Mike; Pettie, Deleah; Matheson, Nick; Carter, Lauren; Creanga, Adrian; Watson, Michael J; Kephart, Sally; Ataca, Sila; Vaile, John R; Ueda, George; Crank, Michelle C; Stewart, Lance; Lee, Kelly K; Guttman, Miklos; Baker, David; Mascola, John R; Veesler, David; Graham, Barney S; King, Neil P; Kanekiyo, Masaru | Nature | 2021 Apr | 33762730 | |
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| Identification of Heparan-Sulfate Rich Cells in the Loose Connective Tissues of the Axolotl (Ambystoma mexicanum) with the Potential to Mediate Growth Factor Signaling during Regeneration. | Otsuka, T; Phan, A Q; Laurencin, C T; Esko, J D; Bryant, S V; Gardiner, D M | Regenerative engineering and translational medicine | 2020 Mar | 33748405 | |
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| Liver injury after small bowel resection is prevented in obesity-resistant 129S1/SvImJ mice. | Onufer, Emily Jean; Han, Yong-Hyun; Courtney, Cathleen M; Steinberger, Allie E; Tecos, Maria E; Sutton, Stephanie; Sescleifer, Anne; Ou, Jocelyn; Sanguinetti Czepielewski, Rafael; Randolph, Gwendalyn J; Warner, Brad W | American journal of physiology. Gastrointestinal and liver physiology | 2021 Mar 17 | 33729834 | |
| Zn2+ influx activates ERK and Akt signaling pathways. | Anson, Kelsie J; Corbet, Giulia A; Palmer, Amy E | Proceedings of the National Academy of Sciences of the United States of America | 2021 03 16 | 33712543 | |
| High-speed atomic force microscopy to study pore-forming proteins. | Jiao, Fang; Ruan, Yi; Scheuring, Simon | Methods in enzymology | 2021 | 33712187 | |
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| The neural circuitry of social homeostasis: Consequences of acute versus chronic social isolation. | Lee, Christopher R; Chen, Alon; Tye, Kay M | Cell | 2021 Mar 18 | 33691140 | |
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| The Principles of Antibody Therapy for Infectious Diseases with Relevance for COVID-19. | Casadevall, Arturo; Pirofski, Liise-Anne; Joyner, Michael J | mBio | 2021 03 02 | 33653885 | |
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| Deficient spermiogenesis in mice lacking Rlim. | Wang, Feng; Gervasi, Maria Gracia; Bošković, Ana; Sun, Fengyun; Rinaldi, Vera D; Yu, Jun; Wallingford, Mary C; Tourzani, Darya A; Mager, Jesse; Zhu, Lihua Julie; Rando, Oliver J; Visconti, Pablo E; Strittmatter, Lara; Bach, Ingolf | eLife | 2021 Feb 23 | 33620316 | |
| The STI1-domain is a flexible alpha-helical fold with a hydrophobic groove. | Fry, Michelle Y; Saladi, Shyam M; Clemons Jr, William M | Protein science : a publication of the Protein Society | 2021 Apr | 33620121 | |
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| Molecular basis of tail-anchored integral membrane protein recognition by the cochaperone Sgt2. | Lin, Ku-Feng; Fry, Michelle Y; Saladi, Shyam M; Clemons Jr, William M | The Journal of biological chemistry | 2021 Feb 18 | 33610544 | |
| Genome-wide mapping of Piwi association with specific loci in Drosophila ovaries. | Liu, Na; Neuenkirchen, Nils; Zhong, Mei; Lin, Haifan | G3 (Bethesda, Md.) | 2021 Feb 09 | 33609367 | |
| Music-selective neural populations arise without musical training. | Boebinger, Dana; Norman-Haignere, Sam V; McDermott, Josh H; Kanwisher, Nancy | Journal of neurophysiology | 2021 06 01 | 33596723 | |
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| microRNA-33 maintains adaptive thermogenesis via enhanced sympathetic nerve activity. | Horie, Takahiro; Nakao, Tetsushi; Miyasaka, Yui; Nishino, Tomohiro; Matsumura, Shigenobu; Nakazeki, Fumiko; Ide, Yuya; Kimura, Masahiro; Tsuji, Shuhei; Rodriguez, Randolph Ruiz; Watanabe, Toshimitsu; Yamasaki, Tomohiro; Xu, Sijia; Otani, Chiharu; Miyagawa | Nature communications | 2021 02 16 | 33594062 | |
| Competitive binding of independent extension and retraction motors explains the quantitative dynamics of type IV pili. | Koch, Matthias D; Fei, Chenyi; Wingreen, Ned S; Shaevitz, Joshua W; Gitai, Zemer | Proceedings of the National Academy of Sciences of the United States of America | 2021 Feb 23 | 33593905 | |
| High-throughput behavioral screen in C. elegans reveals Parkinson's disease drug candidates. | Sohrabi, Salman; Mor, Danielle E; Kaletsky, Rachel; Keyes, William; Murphy, Coleen T | Communications biology | 2021 Feb 15 | 33589689 | |
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| Radiolabeling of Gold Nanocages for Potential Applications in Tracking, Diagnosis, and Image-Guided Therapy. | Qiu, Jichuan; Liu, Yongjian; Xia, Younan | Advanced healthcare materials | 2021 08 | 33470560 | |
| A High-Dimensional Window into the Micro-Environment of Triple Negative Breast Cancer. | Nederlof, Iris; Horlings, Hugo M; Curtis, Christina; Kok, Marleen | Cancers | 2021 Jan 16 | 33467084 | |
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| Single-Cell Delineation of Who's on First and Second Heart Fields During Development. | Galdos, Francisco X; Wu, Sean M | Circulation research. | 2019 Aug 02; | 31518166 | |
| Association of the US President's Emergency Plan for AIDS Relief's Funding With Prevention of Mother-to-Child Transmission of HIV in Kenya. | Barnhart, Dale A; Tsikhutsu, Isaac; Kirui, Duncan; Sawe, Fredrick; Muli, Jane; Sugut, William; Abboud, Nareen; Birx, Deborah; Hamm, Tiffany; Coakley, Peter; Hickey, Patrick W; Wolfman, Vanessa; Lee, Elizabeth; Spiegelman, Donna | JAMA network open. | 2019 09 04; | 31517966 | |
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| Supervised classification enables rapid annotation of cell atlases. | Pliner, Hannah A; Shendure, Jay; Trapnell, Cole | Nature methods. | 2019 Oct; | 31501545 | |
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| Voluntary exercise normalizes the proteomic landscape in muscle and brain and improves the phenotype of progeroid mice. | Ross, Jaime M; Coppotelli, Giuseppe; Branca, Rui M; Kim, Kyung M; Lehtiö, Janne; Sinclair, David A; Olson, Lars | Aging cell. | 2019 12; | 31489782 | |
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| Host-Pathogen Relationship Advice: Fat Protects against a Broken Heart. | McCarville, Justin L; Ayres, Janelle S | Cell metabolism. | 2019 09 03; | 31484052 | |
| A pooled single-cell genetic screen identifies regulatory checkpoints in the continuum of the epithelial-to-mesenchymal transition. | McFaline-Figueroa, José L; Hill, Andrew J; Qiu, Xiaojie; Jackson, Dana; Shendure, Jay; Trapnell, Cole | Nature genetics. | 2019 Sep; | 31477929 | |
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| 4D cardiac electromechanical activation imaging. | Grondin, Julien; Wang, Dafang; Grubb, Christopher S; Trayanova, Natalia; Konofagou, Elisa E | Computers in biology and medicine. | 2019 Oct; | 31476587 | |
| Diffuse intrinsic pontine glioma: molecular landscape and emerging therapeutic targets. | Aziz-Bose, Razina; Monje, Michelle | Current opinion in oncology. | 2019 11; | 31464759 | |
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| Harvard HIV and Aging Workshop: Perspectives and Priorities from Claude D. Pepper Centers and Centers for AIDS Research. | Montano, Monty; Bhasin, Shalender; D'Aquila, Richard T; Erlandson, Kristine M; Evans, William J; Funderburg, Nicholas T; Justice, Amy; Ndhlovu, Lishomwa C; Ojikutu, Bisola; Pahor, Marco; Pahwa, Savita; Ryan, Alice S; Schrack, Jennifer; Schultz, Michael B; Sebastiani, Paola; Sinclair, David A; Tripp, Julia; Walker, Bruce; Womack, Julie A; Yung, Raymond; Reeves, R Keith | AIDS research and human retroviruses. | 2019 Nov/Dec; | 31456412 | |
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| Predictive shifts in free energy couple mutations to their phenotypic consequences. | Chure, Griffin; Razo-Mejia, Manuel; Belliveau, Nathan M; Einav, Tal; Kaczmarek, Zofii A; Barnes, Stephanie L; Lewis, Mitchell; Phillips, Rob | Proceedings of the National Academy of Sciences of the United States of America. | 2019 09 10; | 31451655 | |
| Mechanism and Regulation of Gasdermin-Mediated Cell Death. | Xia, Shiyu; Hollingsworth 4th, Louis Robert; Wu, Hao | Cold Spring Harbor perspectives in biology. | 2020 03 02; | 31451512 | |
| Emerging mechanistic underpinnings and therapeutic targets for chemotherapy-related cognitive impairment. | Gibson, Erin M; Monje, Michelle | Current opinion in oncology. | 2019 11; | 31449084 | |
| Characterizing Conduction Channels in Postinfarction Patients Using a Personalized Virtual Heart. | Deng, Dongdong; Prakosa, Adityo; Shade, Julie; Nikolov, Plamen; Trayanova, Natalia A | Biophysical journal. | 2019 Dec 17; | 31447108 | |
| High-resolution, high-contrast mid-infrared imaging of fresh biological samples with ultraviolet-localized photoacoustic microscopy. | Shi, Junhui; Wong, Terence T W; He, Yun; Li, Lei; Zhang, Ruiying; Yung, Christopher S; Hwang, Jeeseong; Maslov, Konstantin; Wang, Lihong V | Nature photonics. | 2019 Sep; | 31440304 | |
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| Pursuing Human-Relevant Gut Microbiota-Immune Interactions. | Spencer, Sean P; Fragiadakis, Gabriela K; Sonnenburg, Justin L | Immunity | 2019 08 20 | 31433970 | |
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| Neural circuitry of social learning in Drosophila requires multiple inputs to facilitate inter-species communication. | Kacsoh, Balint Z; Bozler, Julianna; Hodge, Sassan; Bosco, Giovanni | Communications biology. | 2019; | 31428697 | |
| Immuno-SABER enables highly multiplexed and amplified protein imaging in tissues. | Saka, Sinem K; Wang, Yu; Kishi, Jocelyn Y; Zhu, Allen; Zeng, Yitian; Xie, Wenxin; Kirli, Koray; Yapp, Clarence; Cicconet, Marcelo; Beliveau, Brian J; Lapan, Sylvain W; Yin, Siyuan; Lin, Millicent; Boyden, Edward S; Kaeser, Pascal S; Pihan, German; Church, George M; Yin, Peng | Nature biotechnology. | 2019 Sep; | 31427819 | |
| Computationally guided personalized targeted ablation of persistent atrial fibrillation. | Boyle, Patrick M; Zghaib, Tarek; Zahid, Sohail; Ali, Rheeda L; Deng, Dongdong; Franceschi, William H; Hakim, Joe B; Murphy, Michael J; Prakosa, Adityo; Zimmerman, Stefan L; Ashikaga, Hiroshi; Marine, Joseph E; Kolandaivelu, Aravindan; Nazarian, Saman; Spragg, David D; Calkins, Hugh; Trayanova, Natalia A | Nature biomedical engineering. | 2019 Aug 19; | 31427780 | |
| Acute Focal Seizures Start As Local Synchronizations of Neuronal Ensembles. | Wenzel, Michael; Hamm, Jordan P; Peterka, Darcy S; Yuste, Rafael | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2019 Oct 23; | 31427393 | |
| POLYMERIC BIOMATERIALS FOR SCAFFOLD-BASED BONE REGENERATIVE ENGINEERING. | Ogueri, Kenneth S; Jafari, Tahereh; Escobar Ivirico, Jorge L; Laurencin, Cato T | Regenerative engineering and translational medicine. | 2019 Jun; | 31423461 | |
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| Neuropeptide F regulates courtship in Drosophila through a male-specific neuronal circuit. | Liu, Weiwei; Ganguly, Anindya; Huang, Jia; Wang, Yijin; Ni, Jinfei D; Gurav, Adishthi S; Aguilar, Morris A; Montell, Craig | eLife. | 2019 Aug 12; | 31403399 | |
| Nicotinamide adenine dinucleotides and their precursor NMN have no direct effect on microtubule dynamics in purified brain tubulin. | Luchniak, Anna; Mahamdeh, Mohammed; Howard, Jonathon | PloS one. | 2019; | 31393939 | |
| Convergent Temperature Representations in Artificial and Biological Neural Networks. | Haesemeyer, Martin; Schier, Alexander F; Engert, Florian | Neuron. | 2019 Sep 25; | 31376984 | |
| CRISPR Tools for Systematic Studies of RNA Regulation. | Engreitz, Jesse; Abudayyeh, Omar; Gootenberg, Jonathan; Zhang, Feng | Cold Spring Harbor perspectives in biology. | 2019 08 01; | 31371352 | |
| Variability in nicotine conditioned place preference and stress-induced reinstatement in mice: Effects of sex, initial chamber preference, and guanfacine. | Lee, Angela M; Calarco, Cali A; McKee, Sherry A; Mineur, Yann S; Picciotto, Marina R | Genes, brain, and behavior. | 2020 Mar; | 31364813 | |
| Transforming the development and dissemination of cutting-edge microscopy and computation. | Colón-Ramos, Daniel A; La Riviere, Patrick; Shroff, Hari; Oldenbourg, Rudolf | Nature methods | 2019 08 | 31363203 | |
| Nanoenabled Direct Contact Interfacing of Syringe-Injectable Mesh Electronics. | Lee, Jung Min; Hong, Guosong; Lin, Dingchang; Schuhmann Jr, Thomas G; Sullivan, Andrew T; Viveros, Robert D; Park, Hong-Gyu; Lieber, Charles M | Nano letters. | 2019 Aug 14; | 31361503 | |
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| Zebrafish oxytocin neurons drive nocifensive behavior via brainstem premotor targets. | Wee, Caroline L; Nikitchenko, Maxim; Wang, Wei-Chun; Luks-Morgan, Sasha J; Song, Erin; Gagnon, James A; Randlett, Owen; Bianco, Isaac H; Lacoste, Alix M B; Glushenkova, Elena; Barrios, Joshua P; Schier, Alexander F; Kunes, Samuel; Engert, Florian; Douglass, Adam D | Nature neuroscience. | 2019 09; | 31358991 | |
| Methods to identify and optimize small molecules interacting with RNA (SMIRNAs). | Ursu, Andrei; Vézina-Dawod, Simon; Disney, Matthew D | Drug discovery today. | 2019 Jul 26; | 31356880 | |
| B Cell-Mediated Antigen Presentation through MHC Class II Is Dispensable for Atherosclerosis Progression. | Williams, Jesse W; Elvington, Andrew; Kessler, Skyler; Wohltmann, Mary; Wu, Gregory F; Randolph, Gwendalyn J | ImmunoHorizons. | 2019 01 21; | 31356175 | |
| Methyl-Sensing Nuclear Receptor Liver Receptor Homolog-1 Regulates Mitochondrial Function in Mouse Hepatocytes. | Choi, Sungwoo; Dong, Bingning; Lin, Chih-Chun Janet; Heo, Mi Jeong; Kim, Kang Ho; Sun, Zhen; Wagner, Martin; Putluri, Nagireddy; Suh, Jae Myoung; Wang, Meng C; Moore, David D | Hepatology (Baltimore, Md.). | 2019 Jul 29; | 31355949 | |
| Identification and Application of Gene Expression Signatures Associated with Lifespan Extension. | Tyshkovskiy, Alexander; Bozaykut, Perinur; Borodinova, Anastasia A; Gerashchenko, Maxim V; Ables, Gene P; Garratt, Michael; Khaitovich, Philipp; Clish, Clary B; Miller, Richard A; Gladyshev, Vadim N | Cell metabolism. | 2019 Sep 03; | 31353263 | |
| Bioprinting Approaches to Engineering Vascularized 3D Cardiac Tissues. | Puluca, Nazan; Lee, Soah; Doppler, Stefanie; Münsterer, Andrea; Dreßen, Martina; Krane, Markus; Wu, Sean M | Current cardiology reports. | 2019 07 27; | 31352612 | |
| Astrocyte-Neuron Interactions in the Striatum: Insights on Identity, Form, and Function. | Khakh, Baljit S | Trends in neurosciences. | 2019 Sep; | 31351745 | |
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| Resolving medulloblastoma cellular architecture by single-cell genomics. | Hovestadt, Volker; Smith, Kyle S; Bihannic, Laure; Filbin, Mariella G; Shaw, McKenzie L; Baumgartner, Alicia; DeWitt, John C; Groves, Andrew; Mayr, Lisa; Weisman, Hannah R; Richman, Alyssa R; Shore, Marni E; Goumnerova, Liliana; Rosencrance, Celeste; Carter, Robert A; Phoenix, Timothy N; Hadley, Jennifer L; Tong, Yiai; Houston, Jim; Ashmun, Richard A; DeCuypere, Michael; Sharma, Tanvi; Flasch, Diane; Silkov, Antonina; Ligon, Keith L; Pomeroy, Scott L; Rivera, Miguel N; Rozenblatt-Rosen, Orit; Rusert, Jessica M; Wechsler-Reya, Robert J; Li, Xiao-Nan; Peyrl, Andreas; Gojo, Johannes; Kirchhofer, Dominik; Lötsch, Daniela; Czech, Thomas; Dorfer, Christian; Haberler, Christine; Geyeregger, Rene; Halfmann, Angela; Gawad, Charles; Easton, John; Pfister, Stefan M; Regev, Aviv; Gajjar, Amar; Orr, Brent A; Slavc, Irene; Robinson, Giles W; Bernstein, Bradley E; Suvà, Mario L; Northcott, Paul A | Nature. | 2019 Aug; | 31341285 | |
| Advances in the automation of whole-cell patch clamp technology. | Suk, Ho-Jun; Boyden, Edward S; van Welie, Ingrid | Journal of neuroscience methods. | 2019 10 01; | 31336060 | |
| Near-Infrared IIb Fluorescence Imaging of Vascular Regeneration with Dynamic Tissue Perfusion Measurement and High Spatial Resolution. | Ma, Zhuoran; Zhang, Mingxi; Yue, Jingying; Alcazar, Cynthia; Zhong, Yeteng; Doyle, Timothy C; Dai, Hongjie; Huang, Ngan F | Advanced functional materials. | 2018 Sep 05; | 31327961 | |
| An Integrative Model of Cellular States, Plasticity, and Genetics for Glioblastoma. | Neftel, Cyril; Laffy, Julie; Filbin, Mariella G; Hara, Toshiro; Shore, Marni E; Rahme, Gilbert J; Richman, Alyssa R; Silverbush, Dana; Shaw, McKenzie L; Hebert, Christine M; Dewitt, John; Gritsch, Simon; Perez, Elizabeth M; Gonzalez Castro, L Nicolas; Lan, Xiaoyang; Druck, Nicholas; Rodman, Christopher; Dionne, Danielle; Kaplan, Alexander; Bertalan, Mia S; Small, Julia; Pelton, Kristine; Becker, Sarah; Bonal, Dennis; Nguyen, Quang-De; Servis, Rachel L; Fung, Jeremy M; Mylvaganam, Ravindra; Mayr, Lisa; Gojo, Johannes; Haberler, Christine; Geyeregger, Rene; Czech, Thomas; Slavc, Irene; Nahed, Brian V; Curry, William T; Carter, Bob S; Wakimoto, Hiroaki; Brastianos, Priscilla K; Batchelor, Tracy T; Stemmer-Rachamimov, Anat; Martinez-Lage, Maria; Frosch, Matthew P; Stamenkovic, Ivan; Riggi, Nicolo; Rheinbay, Esther; Monje, Michelle; Rozenblatt-Rosen, Orit; Cahill, Daniel P; Patel, Anoop P; Hunter, Tony; Verma, Inder M; Ligon, Keith L; Louis, David N; Regev, Aviv; Bernstein, Bradley E; Tirosh, Itay; Suvà, Mario L | Cell. | 2019 Aug 08; | 31327527 | |
| Development and Cell Biology of the Blood-Brain Barrier. | Langen, Urs H; Ayloo, Swathi; Gu, Chenghua | Annual review of cell and developmental biology. | 2019 10 06; | 31299172 | |
| A cytosine deaminase for programmable single-base RNA editing. | Abudayyeh, Omar O; Gootenberg, Jonathan S; Franklin, Brian; Koob, Jeremy; Kellner, Max J; Ladha, Alim; Joung, Julia; Kirchgatterer, Paul; Cox, David B T; Zhang, Feng | Science (New York, N.Y.). | 2019 07 26; | 31296651 | |
| Structural characterization of life-extending Caenorhabditis elegans Lipid Binding Protein 8. | Tillman, Matthew C; Khadka, Manoj; Duffy, Jonathon; Wang, Meng C; Ortlund, Eric A | Scientific reports. | 2019 Jul 10; | 31292465 | |
| The RNA encoding the microtubule-associated protein tau has extensive structure that affects its biology. | Chen, Jonathan L; Moss, Walter N; Spencer, Adam; Zhang, Peiyuan; Childs-Disney, Jessica L; Disney, Matthew D | PloS one. | 2019; | 31291322 | |
| Novel Pyrrolo[3,2-d]pyrimidine Compounds Target Mitochondrial and Cytosolic One-carbon Metabolism with Broad-spectrum Antitumor Efficacy. | Dekhne, Aamod S; Shah, Khushbu; Ducker, Gregory S; Katinas, Jade M; Wong-Roushar, Jennifer; Nayeen, Md Junayed; Doshi, Arpit; Ning, Changwen; Bao, Xun; Frühauf, Josephine; Liu, Jenney; Wallace-Povirk, Adrianne; O'Connor, Carrie; Dzinic, Sijana H; White, Kathryn; Kushner, Juiwanna; Kim, Seongho; Hüttemann, Maik; Polin, Lisa; Rabinowitz, Joshua D; Li, Jing; Hou, Zhanjun; Dann 3rd, Charles E; Gangjee, Aleem; Matherly, Larry H | Molecular cancer therapeutics. | 2019 10; | 31289137 | |
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| Transcriptomic Profiling of the Developing Cardiac Conduction System at Single-Cell Resolution. | Goodyer, William Rowland; Beyersdorf, Benjamin; Paik, David T; Tian, Lei; Li, Guang; Buikema, Jan W; Chirikian, Orlando; Choi, Shannon; Venkatraman, Sneha; Adams, Eliza L; Tessier-Lavigne, Marc; Wu, Joseph C; Wu, Sean M | Circulation research. | 2019 Jul 09; | 31284824 | |
| Longitudinal Two-Photon Imaging of Dorsal Hippocampal CA1 in Live Mice. | Ulivi, Alessandro F; Castello-Waldow, Tim P; Weston, Ghabiba; Yan, Long; Yasuda, Ryohei; Chen, Alon; Attardo, Alessio | Journal of visualized experiments : JoVE. | 2019 06 19; | 31282875 | |
| Metabolite Exchange between Mammalian Organs Quantified in Pigs. | Jang, Cholsoon; Hui, Sheng; Zeng, Xianfeng; Cowan, Alexis J; Wang, Lin; Chen, Li; Morscher, Raphael J; Reyes, Jorge; Frezza, Christian; Hwang, Ho Young; Imai, Akito; Saito, Yoshiaki; Okamoto, Keitaro; Vaspoli, Christine; Kasprenski, Loewe; Zsido 2nd, Gerald A; Gorman 3rd, Joseph H; Gorman, Robert C; Rabinowitz, Joshua D | Cell metabolism. | 2019 Sep 03; | 31257152 | |
| Controlling Visually Guided Behavior by Holographic Recalling of Cortical Ensembles. | Carrillo-Reid, Luis; Han, Shuting; Yang, Weijian; Akrouh, Alejandro; Yuste, Rafael | Cell. | 2019 Jul 11; | 31257030 | |
| lncRNA-Induced Spread of Polycomb Controlled by Genome Architecture, RNA Abundance, and CpG Island DNA. | Schertzer, Megan D; Braceros, Keean C A; Starmer, Joshua; Cherney, Rachel E; Lee, David M; Salazar, Gabriela; Justice, Megan; Bischoff, Steven R; Cowley, Dale O; Ariel, Pablo; Zylka, Mark J; Dowen, Jill M; Magnuson, Terry; Calabrese, J Mauro | Molecular cell. | 2019 Aug 08; | 31256989 | |
| Intracellular Zn2+ transients modulate global gene expression in dissociated rat hippocampal neurons. | Sanford, Lynn; Carpenter, Margaret C; Palmer, Amy E | Scientific reports. | 2019 Jun 28; | 31253848 | |
| A comprehensive, multiscale framework for evaluation of arrhythmias arising from cell therapy in the whole post-myocardial infarcted heart. | Yu, Joseph K; Franceschi, William; Huang, Qinwen; Pashakhanloo, Farhad; Boyle, Patrick M; Trayanova, Natalia A | Scientific reports. | 2019 Jun 25; | 31239508 | |
| Mechanisms of Ca2+/calmodulin-dependent kinase II activation in single dendritic spines. | Chang, Jui-Yun; Nakahata, Yoshihisa; Hayano, Yuki; Yasuda, Ryohei | Nature communications. | 2019 Jun 25; | 31239443 | |
| PKR activation by noncanonical ligands: a 5'-triphosphate requirement versus antisense contamination. | Safran, Sarah A; Eckert, Debra M; Leslie, Evan A; Bass, Brenda L | RNA (New York, N.Y.). | 2019 Sep; | 31239298 | |
| Identifying and validating small molecules interacting with RNA (SMIRNAs). | Disney, Matthew D; Velagapudi, Sai Pradeep; Li, Yue; Costales, Matthew G; Childs-Disney, Jessica L | Methods in enzymology. | 2019; | 31239057 | |
| A Stromal Niche Defined by Expression of the Transcription Factor WT1 Mediates Programming and Homeostasis of Cavity-Resident Macrophages. | Buechler, Matthew B; Kim, Ki-Wook; Onufer, Emily J; Williams, Jesse W; Little, Christine C; Dominguez, Claudia X; Li, Qingling; Sandoval, Wendy; Cooper, Jonathan E; Harris, Charles A; Junttila, Melissa R; Randolph, Gwendalyn J; Turley, Shannon J | Immunity. | 2019 07 16; | 31231034 | |
| DNA Microscopy: Optics-free Spatio-genetic Imaging by a Stand-Alone Chemical Reaction. | Weinstein, Joshua A; Regev, Aviv; Zhang, Feng | Cell. | 2019 06 27; | 31230717 | |
| Impacts of obesity, maternal obesity and nicotinamide mononucleotide supplementation on sperm quality in mice. | Youngson, Neil A; Uddin, G Mezbah; Das, Abhirup; Martinez, Carl; Connaughton, Haley S; Whiting, Sara; Yu, Josephine; Sinclair, David A; Aitken, R John; Morris, Margaret J | Reproduction (Cambridge, England). | 2019 08 01; | 31226694 | |
| Nucleic Acid Detection of Plant Genes Using CRISPR-Cas13. | Abudayyeh, Omar O; Gootenberg, Jonathan S; Kellner, Max J; Zhang, Feng | The CRISPR journal. | 2019 06; | 31225754 | |
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| Simultaneous motor preparation and execution in a last-moment reach correction task. | Ames, K Cora; Ryu, Stephen I; Shenoy, Krishna V | Nature communications. | 2019 06 20; | 31221968 | |
| Quantitative evidence for early metastatic seeding in colorectal cancer. | Hu, Zheng; Ding, Jie; Ma, Zhicheng; Sun, Ruping; Seoane, Jose A; Scott Shaffer, J; Suarez, Carlos J; Berghoff, Anna S; Cremolini, Chiara; Falcone, Alfredo; Loupakis, Fotios; Birner, Peter; Preusser, Matthias; Lenz, Heinz-Josef; Curtis, Christina | Nature genetics. | 2019 Jul; | 31209394 | |
| Cas9+ conditionally-immortalized macrophages as a tool for bacterial pathogenesis and beyond. | Roberts, Allison W; Popov, Lauren M; Mitchell, Gabriel; Ching, Krystal L; Licht, Daniel J; Golovkine, Guillaume; Barton, Gregory M; Cox, Jeffery S | eLife. | 2019 Jun 17; | 31204998 | |
| A Specialized Neural Circuit Gates Social Vocalizations in the Mouse. | Tschida, Katherine; Michael, Valerie; Takatoh, Jun; Han, Bao-Xia; Zhao, Shengli; Sakurai, Katsuyasu; Mooney, Richard; Wang, Fan | Neuron. | 2019 08 07; | 31204083 | |
| Structural mechanism for NEK7-licensed activation of NLRP3 inflammasome. | Sharif, Humayun; Wang, Li; Wang, Wei Li; Magupalli, Venkat Giri; Andreeva, Liudmila; Qiao, Qi; Hauenstein, Arthur V; Wu, Zhaolong; Núñez, Gabriel; Mao, Youdong; Wu, Hao | Nature. | 2019 Jun; | 31189953 | |
| Divergence in the functional organization of human and macaque auditory cortex revealed by fMRI responses to harmonic tones. | Norman-Haignere, Sam V; Kanwisher, Nancy; McDermott, Josh H; Conway, Bevil R | Nature neuroscience. | 2019 Jun 10; | 31182868 | |
| Sensitivity of Ablation Targets Prediction to Electrophysiological Parameter Variability in Image-Based Computational Models of Ventricular Tachycardia in Post-infarction Patients. | Deng, Dongdong; Prakosa, Adityo; Shade, Julie; Nikolov, Plamen; Trayanova, Natalia A | Frontiers in physiology. | 2019; | 31178758 | |
| Piwi/PRG-1 Argonaute and TGF-? Mediate Transgenerational Learned Pathogenic Avoidance. | Moore, Rebecca S; Kaletsky, Rachel; Murphy, Coleen T | Cell. | 2019 Jun 13; | 31178117 | |
| Exploration of interaction scoring criteria in the CANDO platform. | Falls, Zackary; Mangione, William; Schuler, James; Samudrala, Ram | BMC research notes. | 2019 Jun 07; | 31174591 | |
| RNA-guided DNA insertion with CRISPR-associated transposases. | Strecker, Jonathan; Ladha, Alim; Gardner, Zachary; Schmid-Burgk, Jonathan L; Makarova, Kira S; Koonin, Eugene V; Zhang, Feng | Science (New York, N.Y.). | 2019 Jun 06; | 31171706 | |
| Accurate Estimation of Neural Population Dynamics without Spike Sorting. | Trautmann, Eric M; Stavisky, Sergey D; Lahiri, Subhaneil; Ames, Katherine C; Kaufman, Matthew T; O'Shea, Daniel J; Vyas, Saurabh; Sun, Xulu; Ryu, Stephen I; Ganguli, Surya; Shenoy, Krishna V | Neuron. | 2019 07 17; | 31171448 | |
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| Microfluidic-based transcriptomics reveal force-independent bacterial rheosensing. | Sanfilippo, Joseph E; Lorestani, Alexander; Koch, Matthias D; Bratton, Benjamin P; Siryaporn, Albert; Stone, Howard A; Gitai, Zemer | Nature microbiology. | 2019 May 13; | 31086313 | |
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| AMPA Receptor Dysregulation and Therapeutic Interventions in a Mouse Model of CDKL5 Deficiency Disorder. | Yennawar, Madhumita; White, Rachel S; Jensen, Frances E | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2019 Jun 12; | 30952813 | |
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| Intramolecular Fluorescent Protein Association in a Class of Zinc FRET Sensors Leads to Increased Dynamic Range. | Slocum, Joshua D; Palmer, Amy E; Jimenez, Ralph | The journal of physical chemistry. B. | 2019 Apr 11; | 30942588 | |
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| Telomere Dysfunction Induces Sirtuin Repression that Drives Telomere-Dependent Disease. | Amano, Hisayuki; Chaudhury, Arindam; Rodriguez-Aguayo, Cristian; Lu, Lan; Akhanov, Viktor; Catic, Andre; Popov, Yury V; Verdin, Eric; Johnson, Hannah; Stossi, Fabio; Sinclair, David A; Nakamaru-Ogiso, Eiko; Lopez-Berestein, Gabriel; Chang, Jeffrey T; Neilson, Joel R; Meeker, Alan; Finegold, Milton; Baur, Joseph A; Sahin, Ergun | Cell metabolism. | 2019 Mar 20; | 30930169 | |
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| Enhancing the Tactile and Near-Infrared Sensing Capabilities of Electrospun PVDF Nanofibers with the Use of Gold Nanocages. | Li, Haoxuan; Wu, Tong; Xie, Minghao; Shi, Yifeng; Shen, Song; Zhao, Ming; Yang, Xuan; Figueroa-Cosme, Legna M; Ke, Qinfei; Xia, Younan | Journal of materials chemistry. C. | 2018 Oct 14; | 30911394 | |
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| The Genetics of Aging: A Vertebrate Perspective. | Singh, Param Priya; Demmitt, Brittany A; Nath, Ravi D; Brunet, Anne | Cell. | 2019 03 21; | 30901541 | |
| Characterization of cell fate probabilities in single-cell data with Palantir. | Setty, Manu; Kiseliovas, Vaidotas; Levine, Jacob; Gayoso, Adam; Mazutis, Linas; Pe'er, Dana | Nature biotechnology. | 2019 04; | 30899105 | |
| Targeting RNA with Small Molecules To Capture Opportunities at the Intersection of Chemistry, Biology, and Medicine. | Disney, Matthew D | Journal of the American Chemical Society. | 2019 May 01; | 30896935 | |
| Multigenerational obesity-induced perturbations in oocyte-secreted factor signalling can be ameliorated by exercise and nicotinamide mononucleotide. | Bertoldo, M J; Uddin, G M; Youngson, N A; Agapiou, D; Walters, K A; Sinclair, D A; Morris, M J; Gilchrist, R B | Human reproduction open. | 2018; | 30895251 | |
| Modeling Patient-Derived Glioblastoma with Cerebral Organoids. | Linkous, Amanda; Balamatsias, Demosthenes; Snuderl, Matija; Edwards, Lincoln; Miyaguchi, Ken; Milner, Teresa; Reich, Batsheva; Cohen-Gould, Leona; Storaska, Andrew; Nakayama, Yasumi; Schenkein, Emily; Singhania, Richa; Cirigliano, Stefano; Magdeldin, Tari | Cell reports. | 2019 Mar 19; | 30893594 | |
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| Recombination between phages and CRISPR-cas loci facilitates horizontal gene transfer in staphylococci. | Varble, Andrew; Meaden, Sean; Barrangou, Rodolphe; Westra, Edze R; Marraffini, Luciano A | Nature microbiology. | 2019 Jun; | 30886355 | |
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| Multi-sensory Gamma Stimulation Ameliorates Alzheimer's-Associated Pathology and Improves Cognition. | Martorell, Anthony J; Paulson, Abigail L; Suk, Ho-Jun; Abdurrob, Fatema; Drummond, Gabrielle T; Guan, Webster; Young, Jennie Z; Kim, David Nam-Woo; Kritskiy, Oleg; Barker, Scarlett J; Mangena, Vamsi; Prince, Stephanie M; Brown, Emery N; Chung, Kwanghun; Boyden, Edward S; Singer, Annabelle C; Tsai, Li-Huei | Cell. | 2019 Apr 04; | 30879788 | |
| Lymphatic network remodeling after small bowel resection. | Onufer, Emily J; Czepielewski, Rafael; Seiler, Kristen M; Erlich, Emma; Courtney, Cathleen M; Bustos, Aiza; Randolph, Gwendalyn J; Warner, Brad W | Journal of pediatric surgery. | 2019 Feb 28; | 30879758 | |
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| Commensal Candida albicans Positively Calibrates Systemic Th17 Immunological Responses. | Shao, Tzu-Yu; Ang, W X Gladys; Jiang, Tony T; Huang, Felicia Scaggs; Andersen, Heidi; Kinder, Jeremy M; Pham, Giang; Burg, Ashley R; Ruff, Brandy; Gonzalez, Tammy; Khurana Hershey, Gurjit K; Haslam, David B; Way, Sing Sing | Cell host & microbe. | 2019 Mar 13; | 30870622 | |
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| Engineered CRISPR-Cas9 nuclease with expanded targeting space. | Nishimasu, Hiroshi; Shi, Xi; Ishiguro, Soh; Gao, Linyi; Hirano, Seiichi; Okazaki, Sae; Noda, Taichi; Abudayyeh, Omar O; Gootenberg, Jonathan S; Mori, Hideto; Oura, Seiya; Holmes, Benjamin; Tanaka, Mamoru; Seki, Motoaki; Hirano, Hisato; Aburatani, Hiroyuki | Science (New York, N.Y.). | 2018 09 21; | 30166441 | |
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| High-speed alignment optimization of digital optical phase conjugation systems based on autocovariance analysis in conjunction with orthonormal rectangular polynomials. | Hemphill, Ashton S; Shen, Yuecheng; Hwang, Jeeseong; Wang, Lihong V | Journal of biomedical optics. | 2018 Aug; | 30156064 | |
| Widespread intronic polyadenylation inactivates tumour suppressor genes in leukaemia. | Lee, Shih-Han; Singh, Irtisha; Tisdale, Sarah; Abdel-Wahab, Omar; Leslie, Christina S; Mayr, Christine | Nature. | 2018 09; | 30150773 | |
| Feedback-mediated signal conversion promotes viral fitness. | Vardi, Noam; Chaturvedi, Sonali; Weinberger, Leor S | Proceedings of the National Academy of Sciences of the United States of America. | 2018 09 11; | 30150412 | |
| Tropomyosin dynamics during cardiac muscle contraction as governed by a multi-well energy landscape. | Aboelkassem, Yasser; Trayanova, Natalia | Progress in biophysics and molecular biology. | 2018 Aug 22; | 30145015 | |
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| Increased thin filament activation enhances alternans in human chronic atrial fibrillation. | Zile, Melanie A; Trayanova, Natalia A | American journal of physiology. Heart and circulatory physiology. | 2018 11 01; | 30141984 | |
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| RNA Guide Complementarity Prevents Self-Targeting in Type VI CRISPR Systems. | Meeske, Alexander J; Marraffini, Luciano A | Molecular cell. | 2018 09 06; | 30122537 | |
| An Mtb-Human Protein-Protein Interaction Map Identifies a Switch between Host Antiviral and Antibacterial Responses. | Penn, Bennett H; Netter, Zoe; Johnson, Jeffrey R; Von Dollen, John; Jang, Gwendolyn M; Johnson, Tasha; Ohol, Yamini M; Maher, Cyrus; Bell, Samantha L; Geiger, Kristina; Golovkine, Guillaume; Du, Xiaotang; Choi, Alex; Parry, Trevor; Mohapatra, Bhopal C; St | Molecular cell. | 2018 Aug 16; | 30118682 | |
| Links between environment, diet, and the hunter-gatherer microbiome. | Fragiadakis, Gabriela K; Smits, Samuel A; Sonnenburg, Erica D; Van Treuren, William; Reid, Gregor; Knight, Rob; Manjurano, Alphaxard; Changalucha, John; Dominguez-Bello, Maria Gloria; Leach, Jeff; Sonnenburg, Justin L | Gut microbes. | 2018 Aug 17; | 30118385 | |
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| Microbiome: Focus on Causation and Mechanism. | Fischbach, Michael A | Cell. | 2018 Aug 09; | 30096310 | |
| Directed evolution of excited state lifetime and brightness in FusionRed using a microfluidic sorter. | Manna, Premashis; Hung, Sheng-Ting; Mukherjee, Srijit; Friis, Pia; Simpson, David M; Lo, Maria N; Palmer, Amy E; Jimenez, Ralph | Integrative biology : quantitative biosciences from nano to macro. | 2018 Aug 10; | 30094420 | |
| Association between MicroRNA-373 and Long Noncoding RNA NORAD in Hepatitis C Virus-Infected Hepatocytes Impairs Wee1 Expression for Growth Promotion. | Sur, Subhayan; Sasaki, Reina; Devhare, Pradip; Steele, Robert; Ray, Ranjit; Ray, Ratna B | Journal of virology. | 2018 Oct 15; | 30089699 | |
| Persistent Spiking Activity Underlies Working Memory. | Constantinidis, Christos; Funahashi, Shintaro; Lee, Daeyeol; Murray, John D; Qi, Xue-Lian; Wang, Min; Arnsten, Amy F T | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2018 08 08; | 30089641 | |
| Unconventional Ways to Live and Die: Cell Death and Survival in Development, Homeostasis, and Disease. | Gudipaty, Swapna A; Conner, Christopher M; Rosenblatt, Jody; Montell, Denise J | Annual review of cell and developmental biology. | 2018 10 06; | 30089222 | |
| A maximum likelihood approach to power calculations for stepped wedge designs of binary outcomes. | Zhou, Xin; Liao, Xiaomei; Kunz, Lauren M; Normand, Sharon-Lise T; Wang, Molin; Spiegelman, Donna | Biostatistics (Oxford, England). | 2020 01 01; | 30084949 | |
| Syringe-injectable Mesh Electronics for Stable Chronic Rodent Electrophysiology. | Schuhmann Jr, Thomas G; Zhou, Tao; Hong, Guosong; Lee, Jung Min; Fu, Tian-Ming; Park, Hong-Gyu; Lieber, Charles M | Journal of visualized experiments : JoVE. | 2018 07 21; | 30080192 | |
| Cicero Predicts cis-Regulatory DNA Interactions from Single-Cell Chromatin Accessibility Data. | Pliner, Hannah A; Packer, Jonathan S; McFaline-Figueroa, José L; Cusanovich, Darren A; Daza, Riza M; Aghamirzaie, Delasa; Srivatsan, Sanjay; Qiu, Xiaojie; Jackson, Dana; Minkina, Anna; Adey, Andrew C; Steemers, Frank J; Shendure, Jay; Trapnell, Cole | Molecular cell. | 2018 09 06; | 30078726 | |
| A Single-Cell Atlas of In Vivo Mammalian Chromatin Accessibility. | Cusanovich, Darren A; Hill, Andrew J; Aghamirzaie, Delasa; Daza, Riza M; Pliner, Hannah A; Berletch, Joel B; Filippova, Galina N; Huang, Xingfan; Christiansen, Lena; DeWitt, William S; Lee, Choli; Regalado, Samuel G; Read, David F; Steemers, Frank J; Dist | Cell. | 2018 Aug 23; | 30078704 | |
| Atomic insights into the genesis of cellular filaments by globular proteins. | McPartland, Laura; Heller, Danielle M; Eisenberg, David S; Hochschild, Ann; Sawaya, Michael R | Nature structural & molecular biology. | 2018 08; | 30076408 | |
| Expansion Microscopy: Protocols for Imaging Proteins and RNA in Cells and Tissues. | Asano, Shoh M; Gao, Ruixuan; Wassie, Asmamaw T; Tillberg, Paul W; Chen, Fei; Boyden, Edward S | Current protocols in cell biology. | 2018 09; | 30070431 | |
| Photography Coupled with Self-Propagating Chemical Cascades: Differentiation and Quantitation of G- and V-Nerve Agent Mimics via Chromaticity. | Sun, Xiaolong; Boulgakov, Alexander A; Smith, Leilani N; Metola, Pedro; Marcotte, Edward M; Anslyn, Eric V | ACS central science. | 2018 Jul 25; | 30062113 | |
| A multicolor riboswitch-based platform for imaging of RNA in live mammalian cells. | Braselmann, Esther; Wierzba, Aleksandra J; Polaski, Jacob T; Chromi?ski, Miko?aj; Holmes, Zachariah E; Hung, Sheng-Ting; Batan, Dilara; Wheeler, Joshua R; Parker, Roy; Jimenez, Ralph; Gryko, Dorota; Batey, Robert T; Palmer, Amy E | Nature chemical biology. | 2018 Oct; | 30061719 | |
| Small RNAs Gained during Epididymal Transit of Sperm Are Essential for Embryonic Development in Mice. | Conine, Colin C; Sun, Fengyun; Song, Lina; Rivera-Pérez, Jaime A; Rando, Oliver J | Developmental cell. | 2018 08 20; | 30057276 | |
| Small RNAs Are Trafficked from the Epididymis to Developing Mammalian Sperm. | Sharma, Upasna; Sun, Fengyun; Conine, Colin C; Reichholf, Brian; Kukreja, Shweta; Herzog, Veronika A; Ameres, Stefan L; Rando, Oliver J | Developmental cell. | 2018 08 20; | 30057273 | |
| Assessing Individual and Disseminated Effects in Network-Randomized Studies. | Buchanan, Ashley L; Vermund, Sten H; Friedman, Samuel R; Spiegelman, Donna | American journal of epidemiology. | 2018 11 01; | 30052722 | |
| Exploring early human brain development with structural and physiological neuroimaging. | Vasung, Lana; Abaci Turk, Esra; Ferradal, Silvina L; Sutin, Jason; Stout, Jeffrey N; Ahtam, Banu; Lin, Pei-Yi; Grant, P Ellen | NeuroImage. | 2019 02 15; | 30041061 | |
| Escherichia coli translation strategies differ across carbon, nitrogen and phosphorus limitation conditions. | Li, Sophia Hsin-Jung; Li, Zhiyuan; Park, Junyoung O; King, Christopher G; Rabinowitz, Joshua D; Wingreen, Ned S; Gitai, Zemer | Nature microbiology. | 2018 Aug; | 30038306 | |
| Mapping the Genetic Landscape of Human Cells. | Horlbeck, Max A; Xu, Albert; Wang, Min; Bennett, Neal K; Park, Chong Y; Bogdanoff, Derek; Adamson, Britt; Chow, Eric D; Kampmann, Martin; Peterson, Tim R; Nakamura, Ken; Fischbach, Michael A; Weissman, Jonathan S; Gilbert, Luke A | Cell. | 2018 Aug 09; | 30033366 | |
| 5,10-methenyltetrahydrofolate synthetase deficiency causes a neurometabolic disorder associated with microcephaly, epilepsy, and cerebral hypomyelination. | Rodan, Lance H; Qi, Wanshu; Ducker, Gregory S; Demirbas, Didem; Laine, Regina; Yang, Edward; Walker, Melissa A; Eichler, Florian; Rabinowitz, Joshua D; Anselm, Irina; Berry, Gerard T; Undiagnosed Diseases Network (UDN) | Molecular genetics and metabolism. | 2018 09; | 30031689 | |
| Enzymatic one-step ring contraction for quinolone biosynthesis. | Kishimoto, Shinji; Hara, Kodai; Hashimoto, Hiroshi; Hirayama, Yuichiro; Champagne, Pier Alexandre; Houk, Kendall N; Tang, Yi; Watanabe, Kenji | Nature communications. | 2018 Jul 19; | 30026518 | |
| Drosophila species learn dialects through communal living. | Kacsoh, Balint Z; Bozler, Julianna; Bosco, Giovanni | PLoS genetics. | 2018 07; | 30024883 | |
| Evaluating Public Health Interventions: 8. Causal Inference for Time-Invariant Interventions. | Spiegelman, Donna; Zhou, Xin | American journal of public health. | 2018 09; | 30024804 | |
| GIVE: portable genome browsers for personal websites. | Cao, Xiaoyi; Yan, Zhangming; Wu, Qiuyang; Zheng, Alvin; Zhong, Sheng | Genome biology. | 2018 07 18; | 30016975 | |
| Spreading depolarizations trigger caveolin-1-dependent endothelial transcytosis. | Sadeghian, Homa; Lacoste, Baptiste; Qin, Tao; Toussay, Xavier; Rosa, Roberto; Oka, Fumiaki; Chung, David Y; Takizawa, Tsubasa; Gu, Chenghua; Ayata, Cenk | Annals of neurology. | 2018 Sep; | 30014540 | |
| PKC? integrates spatiotemporally distinct Ca2+ and autocrine BDNF signaling to facilitate synaptic plasticity. | Colgan, Lesley A; Hu, Mo; Misler, Jaime A; Parra-Bueno, Paula; Moran, Corey M; Leitges, Michael; Yasuda, Ryohei | Nature neuroscience. | 2018 Aug; | 30013171 | |
| Small near-infrared photochromic protein for photoacoustic multi-contrast imaging and detection of protein interactions in vivo. | Li, Lei; Shemetov, Anton A; Baloban, Mikhail; Hu, Peng; Zhu, Liren; Shcherbakova, Daria M; Zhang, Ruiying; Shi, Junhui; Yao, Junjie; Wang, Lihong V; Verkhusha, Vladislav V | Nature communications. | 2018 Jul 16; | 30013153 | |
| Multiple robust estimation of marginal structural mean models for unconstrained outcomes. | Babino, Lucia; Rotnitzky, Andrea; Robins, James | Biometrics. | 2019 03; | 30004573 | |
| Ultraconserved Elements Occupy Specific Arenas of Three-Dimensional Mammalian Genome Organization. | McCole, Ruth B; Erceg, Jelena; Saylor, Wren; Wu, Chao-Ting | Cell reports. | 2018 Jul 10; | 29996107 | |
| Resistance-gene-directed discovery of a natural-product herbicide with a new mode of action. | Yan, Yan; Liu, Qikun; Zang, Xin; Yuan, Shuguang; Bat-Erdene, Undramaa; Nguyen, Calvin; Gan, Jianhua; Zhou, Jiahai; Jacobsen, Steven E; Tang, Yi | Nature. | 2018 Jul; | 29995859 | |
| Automated in vivo patch-clamp evaluation of extracellular multielectrode array spike recording capability. | Allen, Brian D; Moore-Kochlacs, Caroline; Bernstein, Jacob G; Kinney, Justin P; Scholvin, Jorg; Seoane, Luís F; Chronopoulos, Chris; Lamantia, Charlie; Kodandaramaiah, Suhasa B; Tegmark, Max; Boyden, Edward S | Journal of neurophysiology. | 2018 11 01; | 29995597 | |
| Attentional fluctuations induce shared variability in macaque primary visual cortex. | Denfield, George H; Ecker, Alexander S; Shinn, Tori J; Bethge, Matthias; Tolias, Andreas S | Nature communications. | 2018 07 09; | 29985411 | |
| A Temperature Gradient Assay to Determine Thermal Preferences of Drosophila Larvae. | Liu, Jiangqu; Sokabe, Takaaki; Montell, Craig | Journal of visualized experiments : JoVE. | ; | 29985331 | |
| Dual-axis illumination for virtually augmenting the detection view of optical-resolution photoacoustic microscopy. | Hsu, Hsun-Chia; Li, Lei; Yao, Junjie; Wong, Terence T W; Shi, Junhui; Chen, Ruimin; Zhou, Qifa; Wang, Lihong | Journal of biomedical optics. | 2018 Jul; | 29981225 | |
| FlashFry: a fast and flexible tool for large-scale CRISPR target design. | McKenna, Aaron; Shendure, Jay | BMC biology. | 2018 Jul 05; | 29976198 | |
| An open-source tool for analysis and automatic identification of dendritic spines using machine learning. | Smirnov, Michael S; Garrett, Tavita R; Yasuda, Ryohei | PloS one. | 2018; | 29975722 | |
| Classification of Single Particles from Human Cell Extract Reveals Distinct Structures. | Verbeke, Eric J; Mallam, Anna L; Drew, Kevin; Marcotte, Edward M; Taylor, David W | Cell reports. | 2018 07 03; | 29972786 | |
| Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment. | Azizi, Elham; Carr, Ambrose J; Plitas, George; Cornish, Andrew E; Konopacki, Catherine; Prabhakaran, Sandhya; Nainys, Juozas; Wu, Kenmin; Kiseliovas, Vaidotas; Setty, Manu; Choi, Kristy; Fromme, Rachel M; Dao, Phuong; McKenney, Peter T; Wasti, Ruby C; Kad | Cell. | 2018 Aug 23; | 29961579 | |
| Recovering Gene Interactions from Single-Cell Data Using Data Diffusion. | van Dijk, David; Sharma, Roshan; Nainys, Juozas; Yim, Kristina; Kathail, Pooja; Carr, Ambrose J; Burdziak, Cassandra; Moon, Kevin R; Chaffer, Christine L; Pattabiraman, Diwakar; Bierie, Brian; Mazutis, Linas; Wolf, Guy; Krishnaswamy, Smita; Pe'er, Dana | Cell. | 2018 07 26; | 29961576 | |
| Four Key Steps Control Glycolytic Flux in Mammalian Cells. | Tanner, Lukas Bahati; Goglia, Alexander G; Wei, Monica H; Sehgal, Talen; Parsons, Lance R; Park, Junyoung O; White, Eileen; Toettcher, Jared E; Rabinowitz, Joshua D | Cell systems. | 2018 Jul 25; | 29960885 | |
| A method for single-neuron chronic recording from the retina in awake mice. | Hong, Guosong; Fu, Tian-Ming; Qiao, Mu; Viveros, Robert D; Yang, Xiao; Zhou, Tao; Lee, Jung Min; Park, Hong-Gyu; Sanes, Joshua R; Lieber, Charles M | Science (New York, N.Y.). | 2018 Jun 29; | 29954976 | |
| Declining responsiveness to influenza vaccination with progression of human pregnancy. | Schlaudecker, Elizabeth P; Ambroggio, Lilliam; McNeal, Monica M; Finkelman, Fred D; Way, Sing Sing | Vaccine. | 2018 07 25; | 29941326 | |
| Reassessment of c-Kit in Cardiac Cells: A Complex Interplay Between Expression, Fate, and Function. | Zhou, Bin; Wu, Sean M | Circulation research. | 2018 Jun 22; | 29929968 | |
| Dirichlet Process Mixture Model for Correcting Technical Variation in Single-Cell Gene Expression Data. | Prabhakaran, Sandhya; Azizi, Elham; Carr, Ambrose; Pe'er, Dana | JMLR workshop and conference proceedings. | 2016; | 29928470 | |
| MIN1PIPE: A Miniscope 1-Photon-Based Calcium Imaging Signal Extraction Pipeline. | Lu, Jinghao; Li, Chunyuan; Singh-Alvarado, Jonnathan; Zhou, Zhe Charles; Fröhlich, Flavio; Mooney, Richard; Wang, Fan | Cell reports. | 2018 Jun 19; | 29925007 | |
| DNA methylation as a mediator of HLA-DRB1*15:01 and a protective variant in multiple sclerosis. | Kular, Lara; Liu, Yun; Ruhrmann, Sabrina; Zheleznyakova, Galina; Marabita, Francesco; Gomez-Cabrero, David; James, Tojo; Ewing, Ewoud; Lindén, Magdalena; Górnikiewicz, Bartosz; Aeinehband, Shahin; Stridh, Pernilla; Link, Jenny; Andlauer, Till F M; Gasperi, Christiane; Wiendl, Heinz; Zipp, Frauke; Gold, Ralf; Tackenberg, Björn; Weber, Frank; Hemmer, Bernhard; Strauch, Konstantin; Heilmann-Heimbach, Stefanie; Rawal, Rajesh; Schminke, Ulf; Schmidt, Carsten O; Kacprowski, Tim; Franke, Andre; Laudes, Matthias; Dilthey, Alexander T; Celius, Elisabeth G; Søndergaard, Helle B; Tegnér, Jesper; Harbo, Hanne F; Oturai, Annette B; Olafsson, Sigurgeir; Eggertsson, Hannes P; Halldorsson, Bjarni V; Hjaltason, Haukur; Olafsson, Elias; Jonsdottir, Ingileif; Stefansson, Kari; Olsson, Tomas; Piehl, Fredrik; Ekström, Tomas J; Kockum, Ingrid; Feinberg, Andrew P; Jagodic, Maja | Nature communications. | 2018 06 19; | 29921915 | |
| Lamellar projections in the endolymphatic sac act as a relief valve to regulate inner ear pressure. | Swinburne, Ian A; Mosaliganti, Kishore R; Upadhyayula, Srigokul; Liu, Tsung-Li; Hildebrand, David G C; Tsai, Tony Y-C; Chen, Anzhi; Al-Obeidi, Ebaa; Fass, Anna K; Malhotra, Samir; Engert, Florian; Lichtman, Jeff W; Kirchhausen, Tomas; Betzig, Eric; Megason, Sean G | eLife. | 2018 06 19; | 29916365 | |
| Fingerprint Stimulated Raman Scattering Imaging Reveals Retinoid Coupling Lipid Metabolism and Survival. | Chen, Andy J; Li, Junjie; Jannasch, Amber; Mutlu, Ayse Sena; Wang, Meng C; Cheng, Ji-Xin | Chemphyschem : a European journal of chemical physics and physical chemistry. | 2018 10 05; | 29911339 | |
| RGS14 Restricts Plasticity in Hippocampal CA2 by Limiting Postsynaptic Calcium Signaling. | Evans, Paul R; Parra-Bueno, Paula; Smirnov, Michael S; Lustberg, Daniel J; Dudek, Serena M; Hepler, John R; Yasuda, Ryohei | eNeuro. | 2018 May-Jun; | 29911178 | |
| Single-breath-hold photoacoustic computed tomography of the breast. | Lin, Li; Hu, Peng; Shi, Junhui; Appleton, Catherine M; Maslov, Konstantin; Li, Lei; Zhang, Ruiying; Wang, Lihong V | Nature communications. | ; | 29907740 | |
| Limited Macrophage Positional Dynamics in Progressing or Regressing Murine Atherosclerotic Plaques. | Williams, Jesse W; Martel, Catherine; Potteaux, Stephane; Esaulova, Ekaterina; Ingersoll, Molly A; Elvington, Andrew; Saunders, Brian T; Huang, Li-Hao; Habenicht, Andreas J; Zinselmeyer, Bernd H; Randolph, Gwendalyn J | Arteriosclerosis, thrombosis, and vascular biology. | ; | 29903736 | |
| Elucidating relations between fMRI, ECoG, and EEG through a common natural stimulus. | Haufe, Stefan; DeGuzman, Paul; Henin, Simon; Arcaro, Michael; Honey, Christopher J; Hasson, Uri; Parra, Lucas C | NeuroImage. | 2018 Oct 01; | 29902585 | |
| Bright quantum dots emitting at ?1,600 nm in the NIR-IIb window for deep tissue fluorescence imaging. | Zhang, Mingxi; Yue, Jingying; Cui, Ran; Ma, Zhuoran; Wan, Hao; Wang, Feifei; Zhu, Shoujun; Zhou, Ying; Kuang, Yun; Zhong, Yeteng; Pang, Dai-Wen; Dai, Hongjie | Proceedings of the National Academy of Sciences of the United States of America. | 2018 06 26; | 29891702 | |
| Unsupervised Discovery of Demixed, Low-Dimensional Neural Dynamics across Multiple Timescales through Tensor Component Analysis. | Williams, Alex H; Kim, Tony Hyun; Wang, Forea; Vyas, Saurabh; Ryu, Stephen I; Shenoy, Krishna V; Schnitzer, Mark; Kolda, Tamara G; Ganguli, Surya | Neuron. | 2018 06 27; | 29887338 | |
| Role of 3-Dimensional Architecture of Scar and Surviving Tissue in Ventricular Tachycardia: Insights From High-Resolution Ex Vivo Porcine Models. | Pashakhanloo, Farhad; Herzka, Daniel A; Halperin, Henry; McVeigh, Elliot R; Trayanova, Natalia A | Circulation. Arrhythmia and electrophysiology. | ; | 29880529 | |
| Left-Lateralized Contributions of Saccades to Cortical Activity During a One-Back Word Recognition Task. | Chang, Yu-Cherng C; Khan, Sheraz; Taulu, Samu; Kuperberg, Gina; Brown, Emery N; Hämäläinen, Matti S; Temereanca, Simona | Frontiers in neural circuits. | 2018; | 29867372 | |
| A disconnect between precursor frequency, expansion potential, and site-specific CD4+ T cell responses in aged mice. | Deshpande, Neha R; Uhrlaub, Jennifer L; Way, Sing Sing; Nikolich-?ugich, Janko; Kuhns, Michael S | PloS one. | 2018; | 29864157 | |
| Access of choice-disabled young women in Botswana to government structural support programmes: a cross-sectional study. | Cockcroft, Anne; Marokoane, Nobantu; Kgakole, Leagajang; Tswetla, Nametsego; Andersson, Neil | AIDS care | 2018 06 | 29848044 | |
| Early Seizures Prematurely Unsilence Auditory Synapses to Disrupt Thalamocortical Critical Period Plasticity. | Sun, Hongyu; Takesian, Anne E; Wang, Ting Ting; Lippman-Bell, Jocelyn J; Hensch, Takao K; Jensen, Frances E | Cell reports. | 2018 05 29; | 29847785 | |
| Light sheet theta microscopy for rapid high-resolution imaging of large biological samples. | Migliori, Bianca; Datta, Malika S; Dupre, Christophe; Apak, Mehmet C; Asano, Shoh; Gao, Ruixuan; Boyden, Edward S; Hermanson, Ola; Yuste, Rafael; Tomer, Raju | BMC biology. | 2018 May 29; | 29843722 | |
| Quantifying the uncertainty in model parameters using Gaussian process-based Markov chain Monte Carlo in cardiac electrophysiology. | Dhamala, Jwala; Arevalo, Hermenegild J; Sapp, John; Horácek, B Milan; Wu, Katherine C; Trayanova, Natalia A; Wang, Linwei | Medical image analysis. | ; | 29843078 | |
| Single cell genomics to study DNA and chromosome changes in human gametes and embryos. | Blanshard, Robert C; Chen, Chongyi; Xie, Xiaoliang Sunney; Hoffmann, Eva R | Methods in cell biology. | 2018; | 29804682 | |
| A Near-Complete Spatial Map of Olfactory Receptors in the Mouse Main Olfactory Epithelium. | Tan, Longzhi; Xie, Xiaoliang Sunney | Chemical senses. | 2018 Jul 05; | 29796642 | |
| Electroencephalographic markers of brain development during sevoflurane anaesthesia in children up to 3 years old. | Cornelissen, L; Kim, S E; Lee, J M; Brown, E N; Purdon, P L; Berde, C B | British journal of anaesthesia. | 2018 Jun; | 29793594 | |
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| Multiplex assessment of protein variant abundance by massively parallel sequencing. | Matreyek, Kenneth A; Starita, Lea M; Stephany, Jason J; Martin, Beth; Chiasson, Melissa A; Gray, Vanessa E; Kircher, Martin; Khechaduri, Arineh; Dines, Jennifer N; Hause, Ronald J; Bhatia, Smita; Evans, William E; Relling, Mary V; Yang, Wenjian; Shendure, | Nature genetics. | 2018 Jun; | 29785012 | |
| Mycobacterium tuberculosis-specific CD4+ and CD8+ T cells differ in their capacity to recognize infected macrophages. | Yang, Jason D; Mott, Daniel; Sutiwisesak, Rujapak; Lu, Yu-Jung; Raso, Fiona; Stowell, Britni; Babunovic, Greg Hunter; Lee, Jinhee; Carpenter, Steve M; Way, Sing Sing; Fortune, Sarah M; Behar, Samuel M | PLoS pathogens. | 2018 02; | 29782535 | |
| Community-based benchmarking improves spike rate inference from two-photon calcium imaging data. | Berens, Philipp; Freeman, Jeremy; Deneux, Thomas; Chenkov, Nikolay; McColgan, Thomas; Speiser, Artur; Macke, Jakob H; Turaga, Srinivas C; Mineault, Patrick; Rupprecht, Peter; Gerhard, Stephan; Friedrich, Rainer W; Friedrich, Johannes; Paninski, Liam; Pachitariu, Marius; Harris, Kenneth D; Bolte, Ben; Machado, Timothy A; Ringach, Dario; Stone, Jasmine; Rogerson, Luke E; Sofroniew, Nicolas J; Reimer, Jacob; Froudarakis, Emmanouil; Euler, Thomas; Román Rosón, Miroslav; Theis, Lucas; Tolias, Andreas S; Bethge, Matthias | PLoS computational biology. | 2018 05; | 29782491 | |
| Making, Testing, and Using Potassium Ion Selective Microelectrodes in Tissue Slices of Adult Brain. | Octeau, J Christopher; Faas, Guido; Mody, Istvan; Khakh, Baljit S | Journal of visualized experiments : JoVE. | 2018 05 07; | 29781998 | |
| Multiple Click-Selective tRNA Synthetases Expand Mammalian Cell-Specific Proteomics. | Yang, Andrew C; du Bois, Haley; Olsson, Niclas; Gate, David; Lehallier, Benoit; Berdnik, Daniela; Brewer, Kyle D; Bertozzi, Carolyn R; Elias, Joshua E; Wyss-Coray, Tony | Journal of the American Chemical Society. | 2018 06 13; | 29775058 | |
| Single-step Precision Genome Editing in Yeast Using CRISPR-Cas9. | Akhmetov, Azat; Laurent, Jon M; Gollihar, Jimmy; Gardner, Elizabeth C; Garge, Riddhiman K; Ellington, Andrew D; Kachroo, Aashiq H; Marcotte, Edward M | Bio-protocol. | ; | 29770349 | |
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| Host Energy Source Is Important for Disease Tolerance to Malaria. | Cumnock, Katherine; Gupta, Avni S; Lissner, Michelle; Chevee, Victoria; Davis, Nicole M; Schneider, David S | Current biology : CB. | 2018 05 21; | 29754902 | |
| A Post-Transcriptional Feedback Mechanism for Noise Suppression and Fate Stabilization. | Hansen, Maike M K; Wen, Winnie Y; Ingerman, Elena; Razooky, Brandon S; Thompson, Cassandra E; Dar, Roy D; Chin, Charles W; Simpson, Michael L; Weinberger, Leor S | Cell. | 2018 Jun 14; | 29754821 | |
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| The Assembly-Activating Protein Promotes Stability and Interactions between AAV's Viral Proteins to Nucleate Capsid Assembly. | Maurer, Anna C; Pacouret, Simon; Cepeda Diaz, Ana Karla; Blake, Jessica; Andres-Mateos, Eva; Vandenberghe, Luk H | Cell reports. | 2018 05 08; | 29742436 | |
| Regulation of seizure-induced MeCP2 Ser421 phosphorylation in the developing brain. | Rosenberg, Evan C; Lippman-Bell, Jocelyn J; Handy, Marcus; Soldan, Samantha S; Rakhade, Sanjay; Hilario-Gomez, Cristina; Folweiler, Kaitlyn; Jacobs, Leah; Jensen, Frances E | Neurobiology of disease. | 2018 08; | 29738885 | |
| A critical role for nucleoporin 358 (Nup358) in transposon silencing and piRNA biogenesis in Drosophila. | Parikh, Rasesh Y; Lin, Haifan; Gangaraju, Vamsi K | The Journal of biological chemistry. | 2018 06 15; | 29735528 | |
| Genome Editing Redefines Precision Medicine in the Cardiovascular Field. | Dzilic, Elda; Lahm, Harald; Dreßen, Martina; Deutsch, Marcus-André; Lange, Rüdiger; Wu, Sean M; Krane, Markus; Doppler, Stefanie A | Stem cells international. | 2018; | 29731778 | |
| A Brain-wide Circuit Model of Heat-Evoked Swimming Behavior in Larval Zebrafish. | Haesemeyer, Martin; Robson, Drew N; Li, Jennifer M; Schier, Alexander F; Engert, Florian | Neuron. | 2018 May 16; | 29731253 | |
| Corticoamygdala Transfer of Socially Derived Information Gates Observational Learning. | Allsop, Stephen A; Wichmann, Romy; Mills, Fergil; Burgos-Robles, Anthony; Chang, Chia-Jung; Felix-Ortiz, Ada C; Vienne, Alienor; Beyeler, Anna; Izadmehr, Ehsan M; Glober, Gordon; Cum, Meghan I; Stergiadou, Johanna; Anandalingam, Kavitha K; Farris, Kathryn; Namburi, Praneeth; Leppla, Christopher A; Weddington, Javier C; Nieh, Edward H; Smith, Anne C; Ba, Demba; Brown, Emery N; Tye, Kay M | Cell. | 2018 May 31; | 29731170 | |
| Systematic approach for dissecting the molecular mechanisms of transcriptional regulation in bacteria. | Belliveau, Nathan M; Barnes, Stephanie L; Ireland, William T; Jones, Daniel L; Sweredoski, Michael J; Moradian, Annie; Hess, Sonja; Kinney, Justin B; Phillips, Rob | Proceedings of the National Academy of Sciences of the United States of America. | 2018 05 22; | 29728462 | |
| Metabolomics and Isotope Tracing. | Jang, Cholsoon; Chen, Li; Rabinowitz, Joshua D | Cell. | 2018 May 03; | 29727671 | |
| Microbial Genetic Composition Tunes Host Longevity. | Han, Bing; Sivaramakrishnan, Priya; Lin, Chih-Chun J; Neve, Isaiah A A; He, Jingquan; Tay, Li Wei Rachel; Sowa, Jessica N; Sizovs, Antons; Du, Guangwei; Wang, Jin; Herman, Christophe; Wang, Meng C | Cell. | 2018 May 03; | 29727664 | |
| Combinatorial programming of human neuronal progenitors using magnetically-guided stoichiometric mRNA delivery. | Azimi, Sayyed M; Sheridan, Steven D; Ghannad-Rezaie, Mostafa; Eimon, Peter M; Yanik, Mehmet Fatih | eLife. | 2018 05 01; | 29714688 | |
| Development of an optogenetic toolkit for neural circuit dissection in squirrel monkeys. | O'Shea, Daniel J; Kalanithi, Paul; Ferenczi, Emily A; Hsueh, Brian; Chandrasekaran, Chandramouli; Goo, Werapong; Diester, Ilka; Ramakrishnan, Charu; Kaufman, Matthew T; Ryu, Stephen I; Yeom, Kristen W; Deisseroth, Karl; Shenoy, Krishna V | Scientific reports. | 2018 04 30; | 29712920 | |
| Widespread intronic polyadenylation diversifies immune cell transcriptomes. | Singh, Irtisha; Lee, Shih-Han; Sperling, Adam S; Samur, Mehmet K; Tai, Yu-Tzu; Fulciniti, Mariateresa; Munshi, Nikhil C; Mayr, Christine; Leslie, Christina S | Nature communications. | 2018 Apr 30; | 29712909 | |
| A Caenorhabditis elegans protein with a PRDM9-like SET domain localizes to chromatin-associated foci and promotes spermatocyte gene expression, sperm production and fertility. | Engert, Christoph G; Droste, Rita; van Oudenaarden, Alexander; Horvitz, H Robert | PLoS genetics. | 2018 04; | 29702639 | |
| Stage-specific Effects of Bioactive Lipids on Human iPSC Cardiac Differentiation and Cardiomyocyte Proliferation. | Scientific reports. | 2018 Apr 26; | 29700394 | ||
| Field-deployable viral diagnostics using CRISPR-Cas13. | Myhrvold, Cameron; Freije, Catherine A; Gootenberg, Jonathan S; Abudayyeh, Omar O; Metsky, Hayden C; Durbin, Ann F; Kellner, Max J; Tan, Amanda L; Paul, Lauren M; Parham, Leda A; Garcia, Kimberly F; Barnes, Kayla G; Chak, Bridget; Mondini, Adriano; Noguei | Science (New York, N.Y.). | 2018 04 27; | 29700266 | |
| Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis. | Science (New York, N.Y.). | 2018 06 01; | 29700225 | ||
| Cryo-EM structure of the gasdermin A3 membrane pore. | Nature. | 2018 May; | 29695864 | ||
| Bridging barriers: a comparative look at the blood-brain barrier across organisms. | O'Brown, Natasha M; Pfau, Sarah J; Gu, Chenghua | Genes & development. | 2018 04 01; | 29692355 | |
| Structural Biology: Piezo Senses Tension through Curvature. | Liang, Xin; Howard, Jonathon | Current biology : CB. | 2018 Apr 23; | 29689211 | |
| Quantitative Analysis of NAD Synthesis-Breakdown Fluxes. | Liu, Ling; Su, Xiaoyang; Quinn 3rd, William J; Hui, Sheng; Krukenberg, Kristin; Frederick, David W; Redpath, Philip; Zhan, Le; Chellappa, Karthikeyani; White, Eileen; Migaud, Marie; Mitchison, Timothy J; Baur, Joseph A; Rabinowitz, Joshua D | Cell metabolism. | 2018 May 01; | 29685734 | |
| Molecular Cancer Imaging in the Second Near-Infrared Window Using a Renal-Excreted NIR-II Fluorophore-Peptide Probe. | Wang, Weizhi; Ma, Zhuoran; Zhu, Shoujun; Wan, Hao; Yue, Jingying; Ma, Huilong; Ma, Rui; Yang, Qinglai; Wang, Zihua; Li, Qian; Qian, Yixia; Yue, Chunyan; Wang, Yuehua; Fan, Linyang; Zhong, Yeteng; Zhou, Ying; Gao, Hongpeng; Ruan, Junshan; Hu, Zhiyuan; Liang, Yongye; Dai, Hongjie | Advanced materials (Deerfield Beach, Fla.). | 2018 May; | 29682821 | |
| The Structure of the Necrosome RIPK1-RIPK3 Core, a Human Hetero-Amyloid Signaling Complex. | Mompeán, Miguel; Li, Wenbo; Li, Jixi; Laage, Ségolène; Siemer, Ansgar B; Bozkurt, Gunes; Wu, Hao; McDermott, Ann E | Cell. | 2018 May 17; | 29681455 | |
| Developmental and oncogenic programs in H3K27M gliomas dissected by single-cell RNA-seq. | Filbin, Mariella G; Tirosh, Itay; Hovestadt, Volker; Shaw, McKenzie L; Escalante, Leah E; Mathewson, Nathan D; Neftel, Cyril; Frank, Nelli; Pelton, Kristine; Hebert, Christine M; Haberler, Christine; Yizhak, Keren; Gojo, Johannes; Egervari, Kristof; Mount | Science (New York, N.Y.). | 2018 04 20; | 29674595 | |
| Amelioration of Neurosensory Structure and Function in Animal and Cellular Models of a Congenital Blindness. | Song, Ji Yun; Aravand, Puya; Nikonov, Sergei; Leo, Lanfranco; Lyubarsky, Arkady; Bennicelli, Jeannette L; Pan, Jieyan; Wei, Zhangyong; Shpylchak, Ivan; Herrera, Pamela; Bennett, Daniel J; Commins, Nicoletta; Maguire, Albert M; Pham, Jennifer; den Hollande | Molecular therapy : the journal of the American Society of Gene Therapy. | 2018 Mar 21; | 29673930 | |
| Optogenetics and Chemogenetics. | Vlasov, Ksenia; Van Dort, Christa J; Solt, Ken | Methods in enzymology. | 2018; | 29673525 | |
| Comparative transcriptomics across 14 Drosophila species reveals signatures of longevity. | Ma, Siming; Avanesov, Andrei S; Porter, Emily; Lee, Byung Cheon; Mariotti, Marco; Zemskaya, Nadezhda; Guigo, Roderic; Moskalev, Alexey A; Gladyshev, Vadim N | Aging cell. | 2018 Apr 19; | 29671950 | |
| Holographic imaging and photostimulation of neural activity. | Yang, Weijian; Yuste, Rafael | Current opinion in neurobiology. | 2018 Jun; | 29660600 | |
| Design of a sustainable prepolarizing magnetic resonance imaging system for infant hydrocephalus. | Obungoloch, Johnes; Harper, Joshua R; Consevage, Steven; Savukov, Igor M; Neuberger, Thomas; Tadigadapa, Srinivas; Schiff, Steven J | Magma (New York, N.Y.). | 2018 Apr 11; | 29644479 | |
| Zidovudine ameliorates pathology in the mouse model of Duchenne muscular dystrophy via P2RX7 purinoceptor antagonism. | Al-Khalidi, Rasha; Panicucci, Chiara; Cox, Paul; Chira, Natalia; Róg, Justyna; Young, Christopher N J; McGeehan, Rhiannon E; Ambati, Kameshwari; Ambati, Jayakrishna; Zab?ocki, Krzysztof; Gazzerro, Elisabetta; Arkle, Stephen; Bruno, Claudio; Górecki, Dariusz C | Acta neuropathologica communications. | 2018 04 11; | 29642926 | |
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| Pseudotyping of HIV-1 with Human T-Lymphotropic Virus 1 (HTLV-1) Envelope Glycoprotein during HIV-1-HTLV-1 Coinfection Facilitates Direct HIV-1 Infection of Female Genital Epithelial Cells: Implications for Sexual Transmission of HIV-1. | Tang, Yuyang; George, Alvin M; Petrechko, Oksana; Nouvet, Franklin J; Sweet, Stephanie D; Tanaka, Yuetsu; Imbiakha, Brian S; Jiang, Guochun; Gao, Wei; Anastos, Kathryn; Hildreth, James E K | mSphere. | 2018 04 25; | 29624497 | |
| Extraction and Analysis of Pan-metabolome Polar Metabolites by Ultra Performance Liquid Chromatography-Tandem Mass Spectrometry (UPLC-MS/MS). | Malik, Dania M; Rhoades, Seth; Weljie, Aalim | Bio-protocol. | 2018 Feb 05; | 29623284 | |
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| An Optical Neuron-Astrocyte Proximity Assay at Synaptic Distance Scales. | Octeau, J Christopher; Chai, Hua; Jiang, Ruotian; Bonanno, Shivan L; Martin, Kelsey C; Khakh, Baljit S | Neuron. | 2018 Apr 04; | 29621490 | |
| Stochastic tuning of gene expression enables cellular adaptation in the absence of pre-existing regulatory circuitry. | Freddolino, Peter L; Yang, Jamie; Momen-Roknabadi, Amir; Tavazoie, Saeed | eLife. | 2018 04 05; | 29620524 | |
| Complete biosynthesis of noscapine and halogenated alkaloids in yeast. | Li, Yanran; Li, Sijin; Thodey, Kate; Trenchard, Isis; Cravens, Aaron; Smolke, Christina D | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Apr 24; | 29610307 | |
| Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain. | Raj, Bushra; Wagner, Daniel E; McKenna, Aaron; Pandey, Shristi; Klein, Allon M; Shendure, Jay; Gagnon, James A; Schier, Alexander F | Nature biotechnology. | 2018 Jun; | 29608178 | |
| Cysteine dioxygenase is essential for mouse sperm osmoadaptation and male fertility. | Asano, Atsushi; Roman, Heather B; Hirschberger, Lawrence L; Ushiyama, Ai; Nelson, Jacquelyn L; Hinchman, Meleana M; Stipanuk, Martha H; Travis, Alexander J | The FEBS journal. | 2018 05; | 29604178 | |
| Interbrain cortical synchronization encodes multiple aspects of social interactions in monkey pairs. | Tseng, Po-He; Rajangam, Sankaranarayani; Lehew, Gary; Lebedev, Mikhail A; Nicolelis, Miguel A L | Scientific reports. | 2018 Mar 29; | 29599529 | |
| Fates Aligned: Origins and Mechanisms of Ventricular Conduction System and Ventricular Wall Development. | Goodyer, William R; Wu, Sean M | Pediatric cardiology. | 2018 Mar 28; | 29594502 | |
| Deconstructing the pluripotency gene regulatory network. | Li, Mo; Izpisua Belmonte, Juan Carlos | Nature cell biology. | 2018 04; | 29593328 | |
| Anti-CTLA-4 therapy requires an Fc domain for efficacy. | Ingram, Jessica R; Blomberg, Olga S; Rashidian, Mohammad; Ali, Lestat; Garforth, Scott; Fedorov, Elena; Fedorov, Alexander A; Bonanno, Jeffrey B; Le Gall, Camille; Crowley, Stephanie; Espinosa, Camilo; Biary, Tamara; Keliher, Edmund J; Weissleder, Ralph; | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Apr 10; | 29581255 | |
| Reactivation of the Nkx2.5 cardiac enhancer after myocardial infarction does not presage myogenesis. | Deutsch, Marcus-André; Doppler, Stefanie A; Li, Xinghai; Lahm, Harald; Santamaria, Gianluca; Cuda, Giovanni; Eichhorn, Stefan; Ratschiller, Thomas; Dzilic, Elda; Dreßen, Martina; Eckart, Annekathrin; Stark, Konstantin; Massberg, Steffen; Bartels, Anna; Ri | Cardiovascular research. | 2018 Mar 20; | 29579159 | |
| Sirtuin activators and inhibitors: Promises, achievements, and challenges. | Dai, Han; Sinclair, David A; Ellis, James L; Steegborn, Clemens | Pharmacology & therapeutics. | 2018 Mar 22; | 29577959 | |
| Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq. | Pandey, Shristi; Shekhar, Karthik; Regev, Aviv; Schier, Alexander F | Current biology : CB. | 2018 Apr 02; | 29576475 | |
| Global remodeling of the mouse DNA methylome during aging and in response to calorie restriction. | Sziráki, András; Tyshkovskiy, Alexander; Gladyshev, Vadim N | Aging cell. | 2018 Mar 25; | 29575528 | |
| Tuning Transcriptional Regulation through Signaling: A Predictive Theory of Allosteric Induction. | Razo-Mejia, Manuel; Barnes, Stephanie L; Belliveau, Nathan M; Chure, Griffin; Einav, Tal; Lewis, Mitchell; Phillips, Rob | Cell systems. | 2018 Apr 25; | 29574055 | |
| The African turquoise killifish: A research organism to study vertebrate aging and diapause. | Hu, Chi-Kuo; Brunet, Anne | Aging cell. | 2018 Jun; | 29573324 | |
| Impairment of an Endothelial NAD+-H2S Signaling Network Is a Reversible Cause of Vascular Aging. | Das, Abhirup; Huang, George X; Bonkowski, Michael S; Longchamp, Alban; Li, Catherine; Schultz, Michael B; Kim, Lynn-Jee; Osborne, Brenna; Joshi, Sanket; Lu, Yuancheng; Treviño-Villarreal, Jose Humberto; Kang, Myung-Jin; Hung, Tzong-Tyng; Lee, Brendan; Wil | Cell. | 2018 Mar 22; | 29570999 | |
| Amino Acid Restriction Triggers Angiogenesis via GCN2/ATF4 Regulation of VEGF and H2S Production. | Longchamp, Alban; Mirabella, Teodelinda; Arduini, Alessandro; MacArthur, Michael R; Das, Abhirup; Treviño-Villarreal, J Humberto; Hine, Christopher; Ben-Sahra, Issam; Knudsen, Nelson H; Brace, Lear E; Reynolds, Justin; Mejia, Pedro; Tao, Ming; Sharma, Gau | Cell. | 2018 Mar 22; | 29570992 | |
| Economic burden of neonatal sepsis in sub-Saharan Africa. | Ranjeva, Sylvia L; Warf, Benjamin C; Schiff, Steven J | BMJ global health. | 2018; | 29564153 | |
| A bright organic NIR-II nanofluorophore for three-dimensional imaging into biological tissues. | Wan, Hao; Yue, Jingying; Zhu, Shoujun; Uno, Takaaki; Zhang, Xiaodong; Yang, Qinglai; Yu, Kuai; Hong, Guosong; Wang, Junying; Li, Lulin; Ma, Zhuoran; Gao, Hongpeng; Zhong, Yeteng; Su, Jessica; Antaris, Alexander L; Xia, Yan; Luo, Jian; Liang, Yongye; Dai, Hongjie | Nature communications. | 2018 Mar 21; | 29563581 | |
| A deep neural network to assess spontaneous pain from mouse facial expressions. | Tuttle, Alexander H; Molinaro, Mark J; Jethwa, Jasmine F; Sotocinal, Susana G; Prieto, Juan C; Styner, Martin A; Mogil, Jeffrey S; Zylka, Mark J | Molecular pain. | 2018 Jan-Dec; | 29546805 | |
| Personalized Imaging and Modeling Strategies for Arrhythmia Prevention and Therapy. | Trayanova, Natalia A; Boyle, Patrick M; Nikolov, Plamen P | Current opinion in biomedical engineering. | 2018 Mar; | 29546250 | |
| The cis-regulatory dynamics of embryonic development at single-cell resolution. | Cusanovich, Darren A; Reddington, James P; Garfield, David A; Daza, Riza M; Aghamirzaie, Delasa; Marco-Ferreres, Raquel; Pliner, Hannah A; Christiansen, Lena; Qiu, Xiaojie; Steemers, Frank J; Trapnell, Cole; Shendure, Jay; Furlong, Eileen E M | Nature. | 2018 Mar 22; | 29539636 | |
| The Biosynthesis of Lipooligosaccharide from Bacteroides thetaiotaomicron. | Jacobson, Amy N; Choudhury, Biswa P; Fischbach, Michael A | mBio. | 2018 Mar 13; | 29535205 | |
| Design and Fabrication of a Hierarchically Structured Scaffold for Tendon-to-Bone Repair. | Zhu, Chunlei; Pongkitwitoon, Suphannee; Qiu, Jichuan; Thomopoulos, Stavros; Xia, Younan | Advanced materials (Deerfield Beach, Fla.). | 2018 Apr; | 29534316 | |
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| Tissue-like Neural Probes for Understanding and Modulating the Brain. | Hong, Guosong; Viveros, Robert D; Zwang, Theodore J; Yang, Xiao; Lieber, Charles M | Biochemistry. | 2018 Mar 19; | 29529359 | |
| Zinc transporters belonging to the Cation Diffusion Facilitator (CDF) family have complementary roles in transporting zinc out of the cytosol. | Choi, Sangyong; Hu, Ya-Mei; Corkins, Mark E; Palmer, Amy E; Bird, Amanda J | PLoS genetics. | 2018 03; | 29529046 | |
| Relatively slow stochastic gene-state switching in the presence of positive feedback significantly broadens the region of bimodality through stabilizing the uninduced phenotypic state. | Ge, Hao; Wu, Pingping; Qian, Hong; Xie, Xiaoliang Sunney | PLoS computational biology. | 2018 03; | 29529037 | |
| How to Build a Bacterial Cell: MreB as the Foreman of E. coli Construction. | Shi, Handuo; Bratton, Benjamin P; Gitai, Zemer; Huang, Kerwyn Casey | Cell. | 2018 Mar 08; | 29522748 | |
| Nicotinamide Improves Aspects of Healthspan, but Not Lifespan, in Mice. | Mitchell, Sarah J; Bernier, Michel; Aon, Miguel A; Cortassa, Sonia; Kim, Eun Young; Fang, Evandro F; Palacios, Hector H; Ali, Ahmed; Navas-Enamorado, Ignacio; Di Francesco, Andrea; Kaiser, Tamzin A; Waltz, Tyler B; Zhang, Ning; Ellis, James L; Elliott, Pe | Cell metabolism. | 2018 Mar 06; | 29514072 | |
| Therapeutic Potential of NAD-Boosting Molecules: The In Vivo Evidence. | Rajman, Luis; Chwalek, Karolina; Sinclair, David A | Cell metabolism. | 2018 Mar 06; | 29514064 | |
| Toward a universal decoder of linguistic meaning from brain activation. | Pereira, Francisco; Lou, Bin; Pritchett, Brianna; Ritter, Samuel; Gershman, Samuel J; Kanwisher, Nancy; Botvinick, Matthew; Fedorenko, Evelina | Nature communications. | 2018 03 06; | 29511192 | |
| Mapping a functional cancer genome atlas of tumor suppressors in mouse liver using AAV-CRISPR-mediated direct in vivo screening. | Wang, Guangchuan; Chow, Ryan D; Ye, Lupeng; Guzman, Christopher D; Dai, Xiaoyun; Dong, Matthew B; Zhang, Feng; Sharp, Phillip A; Platt, Randall J; Chen, Sidi | Science advances. | 2018 02; | 29503867 | |
| Neuronal regulation of longevity by staying cool. | Lin, Chih-Chun J; Neve, Isaiah A A; Wang, Meng C | Genes & development. | ; | 29491133 | |
| Effect of KCNQ1 G229D mutation on cardiac pumping efficacy and reentrant dynamics in ventricles: Computational study. | Yuniarti, Ana Rahma; Setianto, Febrian; Marcellinus, Aroli; Hwang, Han Jeong; Choi, Seong Wook; Trayanova, Natalia; Lim, Ki Moo | International journal for numerical methods in biomedical engineering. | 2018 06; | 29488358 | |
| A Phase II Study of Tumor Ablation in Patients with Metastatic Sarcoma Stable on Chemotherapy. | Hirbe, Angela C; Jennings, Jack; Saad, Nael; Giardina, Joseph D; Tao, Yu; Luo, Jingqin; Berry, Shellie; Toeniskoetter, Jacqui; Van Tine, Brian A | The oncologist. | 2018 Jul; | 29487221 | |
| A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters. | Piatkevich, Kiryl D; Jung, Erica E; Straub, Christoph; Linghu, Changyang; Park, Demian; Suk, Ho-Jun; Hochbaum, Daniel R; Goodwin, Daniel; Pnevmatikakis, Eftychios; Pak, Nikita; Kawashima, Takashi; Yang, Chao-Tsung; Rhoades, Jeffrey L; Shemesh, Or; Asano, Shoh; Yoon, Young-Gyu; Freifeld, Limor; Saulnier, Jessica L; Riegler, Clemens; Engert, Florian; Hughes, Thom; Drobizhev, Mikhail; Szabo, Balint; Ahrens, Misha B; Flavell, Steven W; Sabatini, Bernardo L; Boyden, Edward S | Nature chemical biology. | 2018 Apr; | 29483642 | |
| C. elegans ADARs antagonize silencing of cellular dsRNAs by the antiviral RNAi pathway. | Reich, Daniel P; Tyc, Katarzyna M; Bass, Brenda L | Genes & development. | 2018 02 01; | 29483152 | |
| Relationship Between Fibrosis Detected on Late Gadolinium-Enhanced Cardiac Magnetic Resonance and Re-Entrant Activity Assessed With Electrocardiographic Imaging in Human Persistent Atrial Fibrillation. | Cochet, Hubert; Dubois, Rémi; Yamashita, Seigo; Al Jefairi, Nora; Berte, Benjamin; Sellal, Jean-Marc; Hooks, Darren; Frontera, Antonio; Amraoui, Sana; Zemoura, Adlane; Denis, Arnaud; Derval, Nicolas; Sacher, Frederic; Corneloup, Olivier; Latrabe, Valérie; Clément-Guinaudeau, Stéphanie; Relan, Jatin; Zahid, Sohail; Boyle, Patrick M; Trayanova, Natalia A; Bernus, Olivier; Montaudon, Michel; Laurent, François; Hocini, Mélèze; Haïssaguerre, Michel; Jaïs, Pierre | JACC. Clinical electrophysiology. | 2018 Jan; | 29479568 | |
| Changes in Ugandan Climate Rainfall at the Village and Forest Level. | Ssentongo, Paddy; Muwanguzi, Abraham J B; Eden, Uri; Sauer, Timothy; Bwanga, George; Kateregga, Geoffrey; Aribo, Lawrence; Ojara, Moses; Mugerwa, Wilberforce Kisamba; Schiff, Steven J | Scientific reports. | 2018 Feb 23; | 29476058 | |
| Unique Molecular Regulation of Higher-Order Prefrontal Cortical Circuits: Insights into the Neurobiology of Schizophrenia. | Datta, Dibyadeep; Arnsten, Amy F T | ACS chemical neuroscience. | 2018 Mar 01; | 29470055 | |
| Modifications and functional genomics of human transfer RNA. | Pan, Tao | Cell research. | 2018 Apr; | 29463900 | |
| OligoMiner provides a rapid, flexible environment for the design of genome-scale oligonucleotide in situ hybridization probes. | Beliveau, Brian J; Kishi, Jocelyn Y; Nir, Guy; Sasaki, Hiroshi M; Saka, Sinem K; Nguyen, Son C; Wu, Chao-Ting; Yin, Peng | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Mar 06; | 29463736 | |
| QFMatch: multidimensional flow and mass cytometry samples alignment. | Orlova, Darya Y; Meehan, Stephen; Parks, David; Moore, Wayne A; Meehan, Connor; Zhao, Qian; Ghosn, Eliver E B; Herzenberg, Leonore A; Walther, Guenther | Scientific reports. | 2018 Feb 19; | 29459702 | |
| On the design of CRISPR-based single-cell molecular screens. | Hill, Andrew J; McFaline-Figueroa, José L; Starita, Lea M; Gasperini, Molly J; Matreyek, Kenneth A; Packer, Jonathan; Jackson, Dana; Shendure, Jay; Trapnell, Cole | Nature methods. | 2018 Apr; | 29457792 | |
| Neural Population Dynamics Underlying Motor Learning Transfer. | Vyas, Saurabh; Even-Chen, Nir; Stavisky, Sergey D; Ryu, Stephen I; Nuyujukian, Paul; Shenoy, Krishna V | Neuron. | 2018 03 07; | 29456026 | |
| Inflammation NODs to Antagonists of RIP2-XIAP Interaction. | Xia, Shiyu; Fu, Tian-Min; Wu, Hao | Molecular cell. | 2018 02 15; | 29452633 | |
| Multiplexed and portable nucleic acid detection platform with Cas13, Cas12a, and Csm6. | Gootenberg, Jonathan S; Abudayyeh, Omar O; Kellner, Max J; Joung, Julia; Collins, James J; Zhang, Feng | Science (New York, N.Y.). | ; | 29449508 | |
| 3D NIR-II Molecular Imaging Distinguishes Targeted Organs with High-Performance NIR-II Bioconjugates. | Zhu, Shoujun; Herraiz, Sonia; Yue, Jingying; Zhang, Mingxi; Wan, Hao; Yang, Qinglai; Ma, Zhuoran; Wang, Yan; He, Jiahuan; Antaris, Alexander L; Zhong, Yeteng; Diao, Shuo; Feng, Yi; Zhou, Ying; Yu, Kuai; Hong, Guosong; Liang, Yongye; Hsueh, Aaron J; Dai, Hongjie | Advanced materials (Deerfield Beach, Fla.). | 2018 Mar; | 29446156 | |
| A spatial gradient of bacterial diversity in the human oral cavity shaped by salivary flow. | Proctor, Diana M; Fukuyama, Julia A; Loomer, Peter M; Armitage, Gary C; Lee, Stacey A; Davis, Nicole M; Ryder, Mark I; Holmes, Susan P; Relman, David A | Nature communications. | ; | 29445174 | |
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| Entrainment of Arteriole Vasomotor Fluctuations by Neural Activity Is a Basis of Blood-Oxygenation-Level-Dependent ''Resting-State'' Connectivity. | Mateo, Celine; Knutsen, Per M; Tsai, Philbert S; Shih, Andy Y; Kleinfeld, David | Neuron. | 2017 Nov 15; | 29107517 | |
| Parvalbumin-Positive Interneurons Regulate Neuronal Ensembles in Visual Cortex. | Agetsuma, Masakazu; Hamm, Jordan P; Tao, Kentaro; Fujisawa, Shigeyoshi; Yuste, Rafael | Cerebral cortex (New York, N.Y. : 1991). | 2018 May 01; | 29106504 | |
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| Facephenes and rainbows: Causal evidence for functional and anatomical specificity of face and color processing in the human brain. | Schalk, Gerwin; Kapeller, Christoph; Guger, Christoph; Ogawa, Hiroshi; Hiroshima, Satoru; Lafer-Sousa, Rosa; Saygin, Zeynep M; Kamada, Kyousuke; Kanwisher, Nancy | Proceedings of the National Academy of Sciences of the United States of America. | 2017 Nov 14; | 29087337 | |
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| Regulation of reproduction and longevity by nutrient-sensing pathways. | Templeman, Nicole M; Murphy, Coleen T | The Journal of cell biology. | 2018 Jan 02; | 29074705 | |
| Flaxseed Consumption Inhibits Chemically Induced Lung Tumorigenesis and Modulates Expression of Phase II Enzymes and Inflammatory Cytokines in A/J Mice. | Chikara, Shireen; Mamidi, Sujan; Sreedasyam, Avinash; Chittem, Kishore; Pietrofesa, Ralph; Zuppa, Athena; Moorthy, Ganesh; Dyer, Neil; Christofidou-Solomidou, Melpo; Reindl, Katie M | Cancer prevention research (Philadelphia, Pa.). | 2018 Jan; | 29074535 | |
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| Human SHMT inhibitors reveal defective glycine import as a targetable metabolic vulnerability of diffuse large B-cell lymphoma. | Ducker, Gregory S; Ghergurovich, Jonathan M; Mainolfi, Nello; Suri, Vipin; Jeong, Stephanie K; Hsin-Jung Li, Sophia; Friedman, Adam; Manfredi, Mark G; Gitai, Zemer; Kim, Hahn; Rabinowitz, Joshua D | Proceedings of the National Academy of Sciences of the United States of America. | 2017 10 24; | 29073064 | |
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| On the Analysis of Case-Control Studies in Cluster-correlated Data Settings. | Haneuse, Sebastien; Rivera-Rodriguez, Claudia | Epidemiology (Cambridge, Mass.). | 2018 Jan; | 29068840 | |
| Genetically Determined Later Puberty Impacts Lowered Bone Mineral Density in Childhood and Adulthood. | Cousminer, Diana L; Mitchell, Jonathan A; Chesi, Alessandra; Roy, Sani M; Kalkwarf, Heidi J; Lappe, Joan M; Gilsanz, Vicente; Oberfield, Sharon E; Shepherd, John A; Kelly, Andrea; McCormack, Shana E; Voight, Benjamin F; Zemel, Babette S; Grant, Struan Fa | Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research. | 2018 03; | 29068475 | |
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| Expansion Mini-Microscopy: An Enabling Alternative in Point-of-Care Diagnostics. | Zhang, Yu Shrike; Santiago, Grissel Trujillo-de; Alvarez, Mario Moisés; Schiff, Steven J; Boyden, Edward S; Khademhosseini, Ali | Current opinion in biomedical engineering. | 2017 Mar; | 29062977 | |
| Virus-Mediated Genome Editing via Homology-Directed Repair in Mitotic and Postmitotic Cells in Mammalian Brain. | Nishiyama, Jun; Mikuni, Takayasu; Yasuda, Ryohei | Neuron. | 2017 Nov 15; | 29056297 | |
| Pattern-based Search of Epigenomic Data Using GeNemo. | Zheng, Alvin; Cao, Xiaoyi; Zhong, Sheng | Journal of visualized experiments : JoVE. | 2017 10 08; | 29053670 | |
| A Systematic Review of Computational Drug Discovery, Development, and Repurposing for Ebola Virus Disease Treatment. | Schuler, James; Hudson, Matthew L; Schwartz, Diane; Samudrala, Ram | Molecules (Basel, Switzerland). | 2017 Oct 20; | 29053626 | |
| Whispering-gallery-mode emission from biological luminescent protein microcavity assemblies. | Humar, Matja?; Yun, Seok Hyun | Optica. | 2017; | 29046889 | |
| A B Cell Regulome Links Notch to Downstream Oncogenic Pathways in Small B Cell Lymphomas. | Ryan, Russell J H; Petrovic, Jelena; Rausch, Dylan M; Zhou, Yeqiao; Lareau, Caleb A; Kluk, Michael J; Christie, Amanda L; Lee, Winston Y; Tarjan, Daniel R; Guo, Bingqian; Donohue, Laura K H; Gillespie, Shawn M; Nardi, Valentina; Hochberg, Ephraim P; Blacklow, Stephen C; Weinstock, David M; Faryabi, Robert B; Bernstein, Bradley E; Aster, Jon C; Pear, Warren S | Cell reports. | 2017 Oct 17; | 29045844 | |
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| Glucose feeds the TCA cycle via circulating lactate. | Hui, Sheng; Ghergurovich, Jonathan M; Morscher, Raphael J; Jang, Cholsoon; Teng, Xin; Lu, Wenyun; Esparza, Lourdes A; Reya, Tannishtha; Le Zhan; Yanxiang Guo, Jessie; White, Eileen; Rabinowitz, Joshua D | Nature. | 2017 11 02; | 29045397 | |
| Live cell imaging of cytosolic NADH/NAD+ ratio in hepatocytes and liver slices. | Masia, Ricard; McCarty, William J; Lahmann, Carolina; Luther, Jay; Chung, Raymond T; Yarmush, Martin L; Yellen, Gary | American journal of physiology. Gastrointestinal and liver physiology. | 2018 01 01; | 29025729 | |
| Identifying direct contacts between protein complex subunits from their conditional dependence in proteomics datasets. | Drew, Kevin; Müller, Christian L; Bonneau, Richard; Marcotte, Edward M | PLoS computational biology. | 2017 Oct; | 29023445 | |
| High-throughput screens using photo-highlighting discover BMP signaling in mitochondrial lipid oxidation. | Yu, Yong; Mutlu, Ayse Sena; Liu, Harrison; Wang, Meng C | Nature communications. | 2017 10 11; | 29021566 | |
| Overproduction of Neurons Is Correlated with Enhanced Cortical Ensembles and Increased Perceptual Discrimination. | Fang, Wei-Qun; Yuste, Rafael | Cell reports. | 2017 Oct 10; | 29020625 | |
| In vivo programming of endogenous antibodies via oral administration of adaptor ligands. | Nagano, Masanobu; Carrillo, Nancy; Otsubo, Nobumasa; Hakamata, Wataru; Ban, Hitoshi; Fuller, Roberta P; Bashiruddin, Nasir K; Barbas 3rd, Carlos F | Bioorganic & medicinal chemistry. | 2017 11 01; | 28988625 | |
| Solution-phase and solid-phase sequential, selective modification of side chains in KDYWEC and KDYWE as models for usage in single-molecule protein sequencing. | Hernandez, Erik T; Swaminathan, Jagannath; Marcotte, Edward M; Anslyn, Eric V | New journal of chemistry = Nouveau journal de chimie. | 2017 Jan 21; | 28983186 | |
| Do Gametes Woo? Evidence for Their Nonrandom Union at Fertilization. | Nadeau, Joseph H | Genetics. | 2017 Oct; | 28978771 | |
| MYC and MCL1 Cooperatively Promote Chemotherapy-Resistant Breast Cancer Stem Cells via Regulation of Mitochondrial Oxidative Phosphorylation. | Lee, Kyung-Min; Giltnane, Jennifer M; Balko, Justin M; Schwarz, Luis J; Guerrero-Zotano, Angel L; Hutchinson, Katherine E; Nixon, Mellissa J; Estrada, Mónica V; Sánchez, Violeta; Sanders, Melinda E; Lee, Taekyu; Gómez, Henry; Lluch, Ana; Pérez-Fidalgo, J Alejandro; Wolf, Melissa Magdalene; Andrejeva, Gabriela; Rathmell, Jeffrey C; Fesik, Stephen W; Arteaga, Carlos L | Cell metabolism. | 2017 Oct 03; | 28978427 | |
| Slowing Down Aging. | Meyer, Katharina; Yankner, Bruce A | Cell metabolism. | 2017 Oct 03; | 28978424 | |
| The effect of antibiotics on protein diffusion in the Escherichia coli cytoplasmic membrane. | Liu, George S; Bratton, Benjamin P; Gitai, Zemer; Shaevitz, Joshua W | PloS one. | 2017; | 28977034 | |
| The transcription fidelity factor GreA impedes DNA break repair. | Sivaramakrishnan, Priya; Sepúlveda, Leonardo A; Halliday, Jennifer A; Liu, Jingjing; Núñez, María Angélica Bravo; Golding, Ido; Rosenberg, Susan M; Herman, Christophe | Nature. | 2017 10 12; | 28976965 | |
| RNA targeting with CRISPR-Cas13. | Abudayyeh, Omar O; Gootenberg, Jonathan S; Essletzbichler, Patrick; Han, Shuo; Joung, Julia; Belanto, Joseph J; Verdine, Vanessa; Cox, David B T; Kellner, Max J; Regev, Aviv; Lander, Eric S; Voytas, Daniel F; Ting, Alice Y; Zhang, Feng | Nature. | 2017 Oct 12; | 28976959 | |
| Nkx2.5+?Cardiomyoblasts Contribute to Cardiomyogenesis in the Neonatal Heart. | Serpooshan, Vahid; Liu, Yuan-Hung; Buikema, Jan W; Galdos, Francisco X; Chirikian, Orlando; Paige, Sharon; Venkatraman, Sneha; Kumar, Anusha; Rawnsley, David R; Huang, Xiaojing; Pijnappels, Daniël A; Wu, Sean M | Scientific reports. | 2017 Oct 03; | 28974782 | |
| Motionless volumetric photoacoustic microscopy with spatially invariant resolution. | Yang, Jiamiao; Gong, Lei; Xu, Xiao; Hai, Pengfei; Shen, Yuecheng; Suzuki, Yuta; Wang, Lihong V | Nature communications. | 2017 10 03; | 28974681 | |
| Targeted antigen delivery by an anti-class II MHC VHH elicits focused ?MUC1(Tn) immunity. | Fang, Tao; Van Elssen, Catharina H M J; Duarte, Joao N; Guzman, Jonathan S; Chahal, Jasdave S; Ling, Jingjing; Ploegh, Hidde L | Chemical science. | 2017 Aug 01; | 28970938 | |
| Sensitivity of reentrant driver localization to electrophysiological parameter variability in image-based computational models of persistent atrial fibrillation sustained by a fibrotic substrate. | Deng, Dongdong; Murphy, Michael J; Hakim, Joe B; Franceschi, William H; Zahid, Sohail; Pashakhanloo, Farhad; Trayanova, Natalia A; Boyle, Patrick M | Chaos (Woodbury, N.Y.). | 2017 Sep; | 28964164 | |
| Boosting the down-shifting luminescence of rare-earth nanocrystals for biological imaging beyond 1500?nm. | Zhong, Yeteng; Ma, Zhuoran; Zhu, Shoujun; Yue, Jingying; Zhang, Mingxi; Antaris, Alexander L; Yuan, Jie; Cui, Ran; Wan, Hao; Zhou, Ying; Wang, Weizhi; Huang, Ngan F; Luo, Jian; Hu, Zhiyuan; Dai, Hongjie | Nature communications. | 2017 09 29; | 28963467 | |
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| Closed-Loop Real-Time Imaging Enables Fully Automated Cell-Targeted Patch-Clamp Neural Recording In Vivo. | Suk, Ho-Jun; van Welie, Ingrid; Kodandaramaiah, Suhasa B; Allen, Brian; Forest, Craig R; Boyden, Edward S | Neuron. | 2017 Sep 27; | 28957673 | |
| From structure to function, how bioinformatics help to reveal functions of our genomes. | Zheng, Xiaoqi; Zhong, Sheng | Genome biology. | 2017 Sep 26; | 28950915 | |
| Evaluating Efficiencies of Dual AAV Approaches for Retinal Targeting. | Carvalho, Livia S; Turunen, Heikki T; Wassmer, Sarah J; Luna-Velez, María V; Xiao, Ru; Bennett, Jean; Vandenberghe, Luk H | Frontiers in neuroscience. | 2017; | 28943836 | |
| A Single-Chain Photoswitchable CRISPR-Cas9 Architecture for Light-Inducible Gene Editing and Transcription. | Zhou, Xin X; Zou, Xinzhi; Chung, Hokyung K; Gao, Yuchen; Liu, Yanxia; Qi, Lei S; Lin, Michael Z | ACS chemical biology. | 2018 Feb 16; | 28938067 | |
| Toward a conceptual framework for early brain and behavior development in autism. | Piven, J; Elison, J T; Zylka, M J | Molecular psychiatry. | 2017 Oct; | 28937691 | |
| PD-L1 is an activation-independent marker of brown adipocytes. | Ingram, Jessica R; Dougan, Michael; Rashidian, Mohammad; Knoll, Marko; Keliher, Edmund J; Garrett, Sarah; Garforth, Scott; Blomberg, Olga S; Espinosa, Camilo; Bhan, Atul; Almo, Steven C; Weissleder, Ralph; Lodish, Harvey; Dougan, Stephanie K; Ploegh, Hidde L | Nature communications. | 2017 09 21; | 28935898 | |
| Laminar differences in decision-related neural activity in dorsal premotor cortex. | Chandrasekaran, Chandramouli; Peixoto, Diogo; Newsome, William T; Shenoy, Krishna V | Nature communications. | 2017 09 20; | 28931803 | |
| Enhanced Nociception in Angelman Syndrome Model Mice. | McCoy, Eric S; Taylor-Blake, Bonnie; Aita, Megumi; Simon, Jeremy M; Philpot, Benjamin D; Zylka, Mark J | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2017 Oct 18; | 28931574 | |
| CbtA toxin of Escherichia coli inhibits cell division and cell elongation via direct and independent interactions with FtsZ and MreB. | Heller, Danielle M; Tavag, Mrinalini; Hochschild, Ann | PLoS genetics. | 2017 Sep; | 28931012 | |
| Estimation and Inference for the Mediation Proportion. | Nevo, Daniel; Liao, Xiaomei; Spiegelman, Donna | The international journal of biostatistics. | 2017 09 20; | 28930628 | |
| In Situ Super-Resolution Imaging of Genomic DNA with OligoSTORM and OligoDNA-PAINT. | Beliveau, Brian J; Boettiger, Alistair N; Nir, Guy; Bintu, Bogdan; Yin, Peng; Zhuang, Xiaowei; Wu, C-Ting | Methods in molecular biology (Clifton, N.J.). | ; | 28924672 | |
| Metabolic crosstalk regulates Porphyromonas gingivalis colonization and virulence during oral polymicrobial infection. | Kuboniwa, Masae; Houser, John R; Hendrickson, Erik L; Wang, Qian; Alghamdi, Samar A; Sakanaka, Akito; Miller, Daniel P; Hutcherson, Justin A; Wang, Tiansong; Beck, David A C; Whiteley, Marvin; Amano, Atsuo; Wang, Huizhi; Marcotte, Edward M; Hackett, Murray; Lamont, Richard J | Nature microbiology. | 2017 Nov; | 28924191 | |
| Tissue Engineering of 3D Organotypic Microtissues by Acoustic Assembly. | Zhu, Yuqing; Serpooshan, Vahid; Wu, Sean; Demirci, Utkan; Chen, Pu; Güven, Sinan | Methods in molecular biology (Clifton, N.J.). | ; | 28921421 | |
| mTOR Inhibition Restores Amino Acid Balance in Cells Dependent on Catabolism of Extracellular Protein. | Nofal, Michel; Zhang, Kevin; Han, Seunghun; Rabinowitz, Joshua D | Molecular cell. | 2017 Sep 21; | 28918901 | |
| Improving membrane protein expression by optimizing integration efficiency. | Niesen, Michiel J M; Marshall, Stephen S; Miller 3rd, Thomas F; Clemons Jr, William M | The Journal of biological chemistry. | 2017 Nov 24; | 28918393 | |
| Selenocysteine tRNA[Ser]Sec, the Central Component of Selenoprotein Biosynthesis: Isolation, Identification, Modification, and Sequencing. | Carlson, Bradley A; Lee, Byeong Jae; Tsuji, Petra A; Copeland, Paul R; Schweizer, Ulrich; Gladyshev, Vadim N; Hatfield, Dolph L | Methods in molecular biology (Clifton, N.J.). | 2018; | 28917036 | |
| Chemical Basis for Deuterium Labeling of Fat and NADPH. | Zhang, Zhaoyue; Chen, Li; Liu, Ling; Su, Xiaoyang; Rabinowitz, Joshua D | Journal of the American Chemical Society. | 2017 Oct 18; | 28911221 | |
| Distinct roles for motor neuron autophagy early and late in the SOD1G93A mouse model of ALS. | Rudnick, Noam D; Griffey, Christopher J; Guarnieri, Paolo; Gerbino, Valeria; Wang, Xueyong; Piersaint, Jason A; Tapia, Juan Carlos; Rich, Mark M; Maniatis, Tom | Proceedings of the National Academy of Sciences of the United States of America. | 2017 Sep 26; | 28904095 | |
| The neuropeptide NMU amplifies ILC2-driven allergic lung inflammation. | Wallrapp, Antonia; Riesenfeld, Samantha J; Burkett, Patrick R; Abdulnour, Raja-Elie E; Nyman, Jackson; Dionne, Danielle; Hofree, Matan; Cuoco, Michael S; Rodman, Christopher; Farouq, Daneyal; Haas, Brian J; Tickle, Timothy L; Trombetta, John J; Baral, Pan | Nature. | 2017 09 21; | 28902842 | |
| SAM-dependent enzyme-catalysed pericyclic reactions in natural product biosynthesis. | Ohashi, Masao; Liu, Fang; Hai, Yang; Chen, Mengbin; Tang, Man-Cheng; Yang, Zhongyue; Sato, Michio; Watanabe, Kenji; Houk, K N; Tang, Yi | Nature. | 2017 Sep 28; | 28902839 | |
| Machine Learning Analysis Identifies Drosophila Grunge/Atrophin as an Important Learning and Memory Gene Required for Memory Retention and Social Learning. | Kacsoh, Balint Z; Greene, Casey S; Bosco, Giovanni | G3 (Bethesda, Md.). | 2017 Nov 06; | 28889104 | |
| Variant Interpretation: Functional Assays to the Rescue. | Starita, Lea M; Ahituv, Nadav; Dunham, Maitreya J; Kitzman, Jacob O; Roth, Frederick P; Seelig, Georg; Shendure, Jay; Fowler, Douglas M | American journal of human genetics. | 2017 Sep 07; | 28886340 | |
| CRISPR-Cas9 mediated one-step disabling of pancreatogenesis in pigs. | Wu, Jun; Vilarino, Marcela; Suzuki, Keiichiro; Okamura, Daiji; Bogliotti, Yanina Soledad; Park, Insung; Rowe, Joan; McNabb, Bret; Ross, Pablo Juan; Belmonte, Juan Carlos Izpisua | Scientific reports. | 2017 Sep 05; | 28874671 | |
| Localized CD47 blockade enhances immunotherapy for murine melanoma. | Ingram, Jessica R; Blomberg, Olga S; Sockolosky, Jonathan T; Ali, Lestat; Schmidt, Florian I; Pishesha, Novalia; Espinosa, Camilo; Dougan, Stephanie K; Garcia, K Christopher; Ploegh, Hidde L; Dougan, Michael | Proceedings of the National Academy of Sciences of the United States of America. | 2017 Sep 19; | 28874561 | |
| Risk Factors, Neuroanatomical Correlates, and Outcome of Neuropsychiatric Symptoms in Alzheimer's Disease. | Poulin, Stéphane P; Bergeron, David; Dickerson, Bradford C; Alzheimer?s Disease Neuroimaging Initiative | Journal of Alzheimer's disease : JAD. | 2017; | 28869463 | |
| PhenoGraph and viSNE facilitate the identification of abnormal T-cell populations in routine clinical flow cytometric data. | DiGiuseppe, Joseph A; Cardinali, Jolene L; Rezuke, William N; Pe'er, Dana | Cytometry. Part B, Clinical cytometry. | 2017 Sep 02; | 28865188 | |
| Closed-Loop Real-Time Imaging Enables Fully Automated Cell-Targeted Patch-Clamp Neural Recording In Vivo. | Suk, Ho-Jun; van Welie, Ingrid; Kodandaramaiah, Suhasa B; Allen, Brian; Forest, Craig R; Boyden, Edward S | Neuron. | 2017 Aug 30; | 28858614 | |
| GUIDES: sgRNA design for loss-of-function screens. | Meier, Joshua A; Zhang, Feng; Sanjana, Neville E | Nature methods. | 2017 Aug 31; | 28858339 | |
| Regulation by 3'-Untranslated Regions. | Mayr, Christine | Annual review of genetics. | ; | 28853924 | |
| Massively parallel single-nucleus RNA-seq with DroNc-seq. | Habib, Naomi; Avraham-Davidi, Inbal; Basu, Anindita; Burks, Tyler; Shekhar, Karthik; Hofree, Matan; Choudhury, Sourav R; Aguet, François; Gelfand, Ellen; Ardlie, Kristin; Weitz, David A; Rozenblatt-Rosen, Orit; Zhang, Feng; Regev, Aviv | Nature methods. | 2017 Oct; | 28846088 | |
| Genetic Depletion of Adipocyte Creatine Metabolism Inhibits Diet-Induced Thermogenesis and Drives Obesity. | Kazak, Lawrence; Chouchani, Edward T; Lu, Gina Z; Jedrychowski, Mark P; Bare, Curtis J; Mina, Amir I; Kumari, Manju; Zhang, Song; Vuckovic, Ivan; Laznik-Bogoslavski, Dina; Dzeja, Petras; Banks, Alexander S; Rosen, Evan D; Spiegelman, Bruce M | Cell metabolism. | 2017 Oct 03; | 28844881 | |
| Green fluorescent genetically encoded calcium indicator based on calmodulin/M13-peptide from fungi. | Barykina, Natalia V; Subach, Oksana M; Piatkevich, Kiryl D; Jung, Erica E; Malyshev, Aleksey Y; Smirnov, Ivan V; Bogorodskiy, Andrey O; Borshchevskiy, Valentin I; Varizhuk, Anna M; Pozmogova, Galina E; Boyden, Edward S; Anokhin, Konstantin V; Enikolopov, Grigori N; Subach, Fedor V | PloS one. | 2017; | 28837632 | |
| What is changing when: Decoding visual information in movies from human intracranial recordings. | Isik, Leyla; Singer, Jedediah; Madsen, Joseph R; Kanwisher, Nancy; Kreiman, Gabriel | NeuroImage. | 2017 Aug 18; | 28823828 | |
| Comprehensive single-cell transcriptional profiling of a multicellular organism. | Cao, Junyue; Packer, Jonathan S; Ramani, Vijay; Cusanovich, Darren A; Huynh, Chau; Daza, Riza; Qiu, Xiaojie; Lee, Choli; Furlan, Scott N; Steemers, Frank J; Adey, Andrew; Waterston, Robert H; Trapnell, Cole; Shendure, Jay | Science (New York, N.Y.). | 2017 08 18; | 28818938 | |
| Tissue-Resident Macrophages in Pancreatic Ductal Adenocarcinoma Originate from Embryonic Hematopoiesis and Promote Tumor Progression. | Zhu, Yu; Herndon, John M; Sojka, Dorothy K; Kim, Ki-Wook; Knolhoff, Brett L; Zuo, Chong; Cullinan, Darren R; Luo, Jingqin; Bearden, Audrey R; Lavine, Kory J; Yokoyama, Wayne M; Hawkins, William G; Fields, Ryan C; Randolph, Gwendalyn J; DeNardo, David G | Immunity. | 2017 08 15; | 28813661 | |
| Reversible Reaction-Based Fluorescent Probe for Real-Time Imaging of Glutathione Dynamics in Mitochondria. | Chen, Jianwei; Jiang, Xiqian; Zhang, Chengwei; MacKenzie, Kevin R; Stossi, Fabio; Palzkill, Timothy; Wang, Meng C; Wang, Jin | ACS sensors. | 2017 Sep 22; | 28809477 | |
| AAV-mediated direct in vivo CRISPR screen identifies functional suppressors in glioblastoma. | Chow, Ryan D; Guzman, Christopher D; Wang, Guangchuan; Schmidt, Florian; Youngblood, Mark W; Ye, Lupeng; Errami, Youssef; Dong, Matthew B; Martinez, Michael A; Zhang, Sensen; Renauer, Paul; Bilguvar, Kaya; Gunel, Murat; Sharp, Phillip A; Zhang, Feng; Platt, Randall J; Chen, Sidi | Nature neuroscience. | 2017 Oct; | 28805815 | |
| Sonofragmentation of Ultrathin 1D Nanomaterials. | Gao, Ruixuan; Gupta, Ishan; Boyden, Edward S | Particle & particle systems characterization : measurement and description of particle properties and behavior in powders and other disperse systems. | 2017 Jan; | 28804214 | |
| Distinct Cellular Mechanisms Underlie Anti-CTLA-4 and Anti-PD-1 Checkpoint Blockade. | Wei, Spencer C; Levine, Jacob H; Cogdill, Alexandria P; Zhao, Yang; Anang, Nana-Ama A S; Andrews, Miles C; Sharma, Padmanee; Wang, Jing; Wargo, Jennifer A; Pe'er, Dana; Allison, James P | Cell. | 2017 Sep 07; | 28803728 | |
| Molecular signatures of longevity: Insights from cross-species comparative studies. | Ma, Siming; Gladyshev, Vadim N | Seminars in cell & developmental biology. | 2017 Oct; | 28800931 | |
| Fate-Regulating Circuits in Viruses: From Discovery to New Therapy Targets. | Pai, Anand; Weinberger, Leor S | Annual review of virology. | 2017 Sep 29; | 28800289 | |
| Genome-scale activation screen identifies a lncRNA locus regulating a gene neighbourhood. | Joung, Julia; Engreitz, Jesse M; Konermann, Silvana; Abudayyeh, Omar O; Verdine, Vanessa K; Aguet, Francois; Gootenberg, Jonathan S; Sanjana, Neville E; Wright, Jason B; Fulco, Charles P; Tseng, Yuen-Yi; Yoon, Charles H; Boehm, Jesse S; Lander, Eric S; Zhang, Feng | Nature. | 2017 08 17; | 28792927 | |
| Electrophysiological properties of basal forebrain cholinergic neurons identified by genetic and optogenetic tagging. | López-Hernández, Gretchen Y; Ananth, Mala; Jiang, Li; Ballinger, Elizabeth C; Talmage, David A; Role, Lorna W | Journal of neurochemistry. | 2017 08; | 28791701 | |
| Leveraging neural dynamics to extend functional lifetime of brain-machine interfaces. | Kao, Jonathan C; Ryu, Stephen I; Shenoy, Krishna V | Scientific reports. | 2017 Aug 07; | 28784984 | |
| Tissue-specific emergence of regulatory and intraepithelial T cells from a clonal T cell precursor. | Bilate, Angelina M; Bousbaine, Djenet; Mesin, Luka; Agudelo, Marianna; Leube, Justin; Kratzert, Andreas; Dougan, Stephanie K; Victora, Gabriel D; Ploegh, Hidde L | Science immunology. | 2016 Aug 26; | 28783695 | |
| The checkpoint for agonist selection precedes conventional selection in human thymus. | Verstichel, Greet; Vermijlen, David; Martens, Liesbet; Goetgeluk, Glenn; Brouwer, Margreet; Thiault, Nicolas; Van Caeneghem, Yasmine; De Munter, Stijn; Weening, Karin; Bonte, Sarah; Leclercq, Georges; Taghon, Tom; Kerre, Tessa; Saeys, Yvan; Van Dorpe, Jo; Cheroutre, Hilde; Vandekerckhove, Bart | Science immunology. | 2017 Feb 24; | 28783686 | |
| Structural Basis for the Canonical and Non-canonical PAM Recognition by CRISPR-Cpf1. | Yamano, Takashi; Zetsche, Bernd; Ishitani, Ryuichiro; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu | Molecular cell. | 2017 Aug 17; | 28781234 | |
| Electrospun Nanofibers: New Concepts, Materials, and Applications. | Xue, Jiajia; Xie, Jingwei; Liu, Wenying; Xia, Younan | Accounts of chemical research | 2017 08 15 | 28777535 | |
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| Resveratrol Improves Vascular Function and Mitochondrial Number but Not Glucose Metabolism in Older Adults. | Pollack, Rena M; Barzilai, Nir; Anghel, Valentin; Kulkarni, Ameya S; Golden, Aaron; O'Broin, Pilib; Sinclair, David A; Bonkowski, Michael S; Coleville, Alexander J; Powell, Danielle; Kim, Sharon; Moaddel, Ruin; Stein, Daniel; Zhang, Kehao; Hawkins, Meredi | The journals of gerontology. Series A, Biological sciences and medical sciences. | 2017 Nov 09; | 28329397 | |
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| A Single-Cell Roadmap of Lineage Bifurcation in Human ESC Models of Embryonic Brain Development. | Yao, Zizhen; Mich, John K; Ku, Sherman; Menon, Vilas; Krostag, Anne-Rachel; Martinez, Refugio A; Furchtgott, Leon; Mulholland, Heather; Bort, Susan; Fuqua, Margaret A; Gregor, Ben W; Hodge, Rebecca D; Jayabalu, Anu; May, Ryan C; Melton, Samuel; Nelson, Angelique M; Ngo, N Kiet; Shapovalova, Nadiya V; Shehata, Soraya I; Smith, Michael W; Tait, Leah J; Thompson, Carol L; Thomsen, Elliot R; Ye, Chaoyang; Glass, Ian A; Kaykas, Ajamete; Yao, Shuyuan; Phillips, John W; Grimley, Joshua S; Levi, Boaz P; Wang, Yanling; Ramanathan, Sharad | Cell stem cell. | 2017 Jan 05; | 28094016 | |
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| Holliday junction trap shows how cells use recombination and a junction-guardian role of RecQ helicase. | Xia, Jun; Chen, Li-Tzu; Mei, Qian; Ma, Chien-Hui; Halliday, Jennifer A; Lin, Hsin-Yu; Magnan, David; Pribis, John P; Fitzgerald, Devon M; Hamilton, Holly M; Richters, Megan; Nehring, Ralf B; Shen, Xi; Li, Lei; Bates, David; Hastings, P J; Herman, Christophe; Jayaram, Makkuni; Rosenberg, Susan M | Science advances. | 2016 Nov; | 28090586 | |
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| Nuclear Localization of Mitochondrial TCA Cycle Enzymes as a Critical Step in Mammalian Zygotic Genome Activation. | Nagaraj, Raghavendra; Sharpley, Mark S; Chi, Fangtao; Braas, Daniel; Zhou, Yonggang; Kim, Rachel; Clark, Amander T; Banerjee, Utpal | Cell. | 2017 Jan 12; | 28086092 | |
| A Periplasmic Polymer Curves Vibrio cholerae and Promotes Pathogenesis. | Bartlett, Thomas M; Bratton, Benjamin P; Duvshani, Amit; Miguel, Amanda; Sheng, Ying; Martin, Nicholas R; Nguyen, Jeffrey P; Persat, Alexandre; Desmarais, Samantha M; VanNieuwenhze, Michael S; Huang, Kerwyn Casey; Zhu, Jun; Shaevitz, Joshua W; Gitai, Zemer | Cell. | 2017 Jan 12; | 28086090 | |
| Enhanced Cell Capture on Functionalized Graphene Oxide Nanosheets through Oxygen Clustering. | Bardhan, Neelkanth M; Kumar, Priyank V; Li, Zeyang; Ploegh, Hidde L; Grossman, Jeffrey C; Belcher, Angela M; Chen, Guan-Yu | ACS nano. | 2017 Feb 28; | 28085249 | |
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| tRNA Misacylation with Methionine in the Mouse Gut Microbiome in Situ. | Schwartz, Michael H; Pan, Tao | Microbial ecology. | 2017 Jan 09; | 28070678 | |
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| Cas13b Is a Type VI-B CRISPR-Associated RNA-Guided RNase Differentially Regulated by Accessory Proteins Csx27 and Csx28. | Smargon, Aaron A; Cox, David B T; Pyzocha, Neena K; Zheng, Kaijie; Slaymaker, Ian M; Gootenberg, Jonathan S; Abudayyeh, Omar A; Essletzbichler, Patrick; Shmakov, Sergey; Makarova, Kira S; Koonin, Eugene V; Zhang, Feng | Molecular cell. | 2017 Feb 16; | 28065598 | |
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| The Sustained Impact of Model Organisms-in Genetics and Epigenetics. | Bonini, Nancy M; Berger, Shelley L | Genetics. | 2017 01; | 28049700 | |
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| Ultrastructural evidence for impaired mitochondrial fission in the aged rhesus monkey dorsolateral prefrontal cortex. | Morozov, Yury M; Datta, Dibyadeep; Paspalas, Constantinos D; Arnsten, Amy F T | Neurobiology of aging. | 2017 Mar; | 28027494 | |
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| Direct evidence for cancer-cell-autonomous extracellular protein catabolism in pancreatic tumors. | Davidson, Shawn M; Jonas, Oliver; Keibler, Mark A; Hou, Han Wei; Luengo, Alba; Mayers, Jared R; Wyckoff, Jeffrey; Del Rosario, Amanda M; Whitman, Matthew; Chin, Christopher R; Condon, Kendall J; Lammers, Alex; Kellersberger, Katherine A; Stall, Brian K; Stephanopoulos, Gregory; Bar-Sagi, Dafna; Han, Jongyoon; Rabinowitz, Joshua D; Cima, Michael J; Langer, Robert; Vander Heiden, Matthew G | Nature medicine. | 2017 Feb; | 28024083 | |
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| A feasibility study of arrhythmia risk prediction in patients with myocardial infarction and preserved ejection fraction. | Deng, Dongdong; Arevalo, Hermenegild J; Prakosa, Adityo; Callans, David J; Trayanova, Natalia A | Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology. | 2016 Dec; | 28011832 | |
| Integrative Analysis of PRKAG2 Cardiomyopathy iPS and Microtissue Models Identifies AMPK as a Regulator of Metabolism, Survival, and Fibrosis. | Hinson, J Travis; Chopra, Anant; Lowe, Andre; Sheng, Calvin C; Gupta, Rajat M; Kuppusamy, Rajarajan; O'Sullivan, John; Rowe, Glenn; Wakimoto, Hiroko; Gorham, Joshua; Zhang, Kehan; Musunuru, Kiran; Gerszten, Robert E; Wu, Sean M; Chen, Christopher S; Seidman, Jonathan G; Seidman, Christine E | Cell reports. | 2016 Dec 20; | 28009297 | |
| Piezo2 senses airway stretch and mediates lung inflation-induced apnoea. | Nonomura, Keiko; Woo, Seung-Hyun; Chang, Rui B; Gillich, Astrid; Qiu, Zhaozhu; Francisco, Allain G; Ranade, Sanjeev S; Liberles, Stephen D; Patapoutian, Ardem | Nature. | 2017 01 12; | 28002412 | |
| In vivo label-free photoacoustic flow cytography and on-the-spot laser killing of single circulating melanoma cells. | He, Yun; Wang, Lidai; Shi, Junhui; Yao, Junjie; Li, Lei; Zhang, Ruiying; Huang, Chih-Hsien; Zou, Jun; Wang, Lihong V | Scientific reports. | 2016 Dec 21; | 28000788 | |
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| Rational Design of Small Molecules Targeting Oncogenic Noncoding RNAs from Sequence. | Disney, Matthew D; Angelbello, Alicia J | Accounts of chemical research. | 2016 Dec 20; | 27993012 | |
| Patterned photostimulation via visible-wavelength photonic probes for deep brain optogenetics. | Segev, Eran; Reimer, Jacob; Moreaux, Laurent C; Fowler, Trevor M; Chi, Derrick; Sacher, Wesley D; Lo, Maisie; Deisseroth, Karl; Tolias, Andreas S; Faraon, Andrei; Roukes, Michael L | Neurophotonics. | 2017 Jan; | 27990451 | |
| Adaptive Chromatin Remodeling Drives Glioblastoma Stem Cell Plasticity and Drug Tolerance. | Liau, Brian B; Sievers, Cem; Donohue, Laura K; Gillespie, Shawn M; Flavahan, William A; Miller, Tyler E; Venteicher, Andrew S; Hebert, Christine H; Carey, Christopher D; Rodig, Scott J; Shareef, Sarah J; Najm, Fadi J; van Galen, Peter; Wakimoto, Hiroaki; Cahill, Daniel P; Rich, Jeremy N; Aster, Jon C; Suvà, Mario L; Patel, Anoop P; Bernstein, Bradley E | Cell stem cell. | 2017 Feb 02; | 27989769 | |
| A Facile and Versatile Method to Endow Biomaterial Devices with Zwitterionic Surface Coatings. | Yesilyurt, Volkan; Veiseh, Omid; Doloff, Joshua C; Li, Jie; Bose, Suman; Xie, Xi; Bader, Andrew R; Chen, Michael; Webber, Matthew J; Vegas, Arturo J; Langer, Robert; Anderson, Daniel G | Advanced healthcare materials. | 2017 Feb; | 27976536 | |
| Capturing and Manipulating Activated Neuronal Ensembles with CANE Delineates a Hypothalamic Social-Fear Circuit. | Sakurai, Katsuyasu; Zhao, Shengli; Takatoh, Jun; Rodriguez, Erica; Lu, Jinghao; Leavitt, Andrew D; Fu, Min; Han, Bao-Xia; Wang, Fan | Neuron. | 2016 Nov 23; | 27974160 | |
| The Antiviral Mechanism of an Influenza A Virus Nucleoprotein-Specific Single-Domain Antibody Fragment. | Hanke, Leo; Knockenhauer, Kevin E; Brewer, R Camille; van Diest, Eline; Schmidt, Florian I; Schwartz, Thomas U; Ploegh, Hidde L | mBio. | 2016 12 13; | 27965447 | |
| Biochemical Characterization of a Eukaryotic Decalin-Forming Diels-Alderase. | Li, Li; Yu, Peiyuan; Tang, Man-Cheng; Zou, Yi; Gao, Shu-Shan; Hung, Yiu-Sun; Zhao, Muxun; Watanabe, Kenji; Houk, K N; Tang, Yi | Journal of the American Chemical Society. | 2016 Dec 14; | 27960349 | |
| Droplet Microfluidic Flow Cytometer For Sorting On Transient Cellular Responses Of Genetically-Encoded Sensors. | Fiedler, Brett L; Van Buskirk, Steven; Carter, Kyle P; Qin, Yan; Carpenter, Margaret C; Palmer, Amy E; Jimenez, Ralph | Analytical chemistry. | 2017 Jan 03; | 27959493 | |
| Influence of donor age on induced pluripotent stem cells. | Lo Sardo, Valentina; Ferguson, William; Erikson, Galina A; Topol, Eric J; Baldwin, Kristin K; Torkamani, Ali | Nature biotechnology. | 2017 Jan; | 27941802 | |
| Precise small-molecule recognition of a toxic CUG RNA repeat expansion. | Rzuczek, Suzanne G; Colgan, Lesley A; Nakai, Yoshio; Cameron, Michael D; Furling, Denis; Yasuda, Ryohei; Disney, Matthew D | Nature chemical biology. | 2017 Feb; | 27941760 | |
| New Transgenic Mouse Lines for Selectively Targeting Astrocytes and Studying Calcium Signals in Astrocyte Processes In Situ and In Vivo. | Srinivasan, Rahul; Lu, Tsai-Yi; Chai, Hua; Xu, Ji; Huang, Ben S; Golshani, Peyman; Coppola, Giovanni; Khakh, Baljit S | Neuron. | 2016 Dec 21; | 27939582 | |
| Gamma frequency entrainment attenuates amyloid load and modifies microglia. | Iaccarino, Hannah F; Singer, Annabelle C; Martorell, Anthony J; Rudenko, Andrii; Gao, Fan; Gillingham, Tyler Z; Mathys, Hansruedi; Seo, Jinsoo; Kritskiy, Oleg; Abdurrob, Fatema; Adaikkan, Chinnakkaruppan; Canter, Rebecca G; Rueda, Richard; Brown, Emery N; Boyden, Edward S; Tsai, Li-Huei | Nature. | 2016 12 07; | 27929004 | |
| Neurodegenerative disorders: Neural synchronization in Alzheimer's disease. | Aron, Liviu; Yankner, Bruce A | Nature. | 2016 12 07; | 27929001 | |
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| Tracking the Activity of mTORC1 in Living Cells Using Genetically Encoded FRET-based Biosensor TORCAR. | Zhou, Xin; Li, Simin; Zhang, Jin | Current protocols in chemical biology. | 2016 Dec 07; | 27925667 | |
| Multiplex gene editing by CRISPR-Cpf1 using a single crRNA array. | Zetsche, Bernd; Heidenreich, Matthias; Mohanraju, Prarthana; Fedorova, Iana; Kneppers, Jeroen; DeGennaro, Ellen M; Winblad, Nerges; Choudhury, Sourav R; Abudayyeh, Omar O; Gootenberg, Jonathan S; Wu, Wen Y; Scott, David A; Severinov, Konstantin; van der Oost, John; Zhang, Feng | Nature biotechnology. | 2017 Jan; | 27918548 | |
| Cortical Control of Spatial Resolution by VIP+ Interneurons. | Ayzenshtat, Inbal; Karnani, Mahesh Miikael; Jackson, Jesse; Yuste, Rafael | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Nov 09; | 27911754 | |
| CD98-Mediated Adhesive Signaling Enables the Establishment and Propagation of Acute Myelogenous Leukemia. | Bajaj, Jeevisha; Konuma, Takaaki; Lytle, Nikki K; Kwon, Hyog Young; Ablack, Jailal N; Cantor, Joseph M; Rizzieri, David; Chuah, Charles; Oehler, Vivian G; Broome, Elizabeth H; Ball, Edward D; van der Horst, Edward H; Ginsberg, Mark H; Reya, Tannishtha | Cancer cell. | 2016 Nov 14; | 27908736 | |
| Biomimicry Promotes the Efficiency of a 10-Step Sequential Enzymatic Reaction on Nanoparticles, Converting Glucose to Lactate. | Mukai, Chinatsu; Gao, Lizeng; Nelson, Jacquelyn L; Lata, James P; Cohen, Roy; Wu, Lauren; Hinchman, Meleana M; Bergkvist, Magnus; Sherwood, Robert W; Zhang, Sheng; Travis, Alexander J | Angewandte Chemie (International ed. in English). | 2017 01 02; | 27901298 | |
| Dry Age-Related Macular Degeneration Pharmacology. | Wright, Charles B; Ambati, Jayakrishna | Handbook of experimental pharmacology. | 2016 Nov 30; | 27900609 | |
| Combating Ebola with Repurposed Therapeutics Using the CANDO Platform. | Chopra, Gaurav; Kaushik, Sashank; Elkin, Peter L; Samudrala, Ram | Molecules (Basel, Switzerland). | 2016 Nov 25; | 27898018 | |
| Coupling immunity and programmed cell suicide in prokaryotes: Life-or-death choices. | Koonin, Eugene V; Zhang, Feng | BioEssays : news and reviews in molecular, cellular and developmental biology. | 2017 Jan; | 27896818 | |
| Immunity around the clock. | Man, Kevin; Loudon, Andrew; Chawla, Ajay | Science (New York, N.Y.). | 2016 11 25; | 27885005 | |
| The Importance of Planning in Motor Learning. | O'Shea, Daniel J; Shenoy, Krishna V | Neuron | 2016 Nov 23 | 27883896 | |
| An Unexpected Regulatory Cascade Governs a Core Function of the Drosophila PRC1 Chromatin Protein Su(z)2. | Nguyen, Son C; Yu, Stephanie; Oberlick, Elaine; Wu, Chao-Ting | Genetics. | 2017 Feb; | 27881472 | |
| The past, present and future of ligament regenerative engineering. | Mengsteab, Paulos Y; Nair, Lakshmi S; Laurencin, Cato T | Regenerative medicine. | 2016 12; | 27879170 | |
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| Redox Paradox: Can Hypoxia Heal Ischemic Hearts? | Guimarães-Camboa, Nuno; Evans, Sylvia M | Developmental cell. | 2016 11 21; | 27875683 | |
| Cell culture-based profiling across mammals reveals DNA repair and metabolism as determinants of species longevity. | Ma, Siming; Upneja, Akhil; Galecki, Andrzej; Tsai, Yi-Miau; Burant, Charles F; Raskind, Sasha; Zhang, Quanwei; Zhang, Zhengdong D; Seluanov, Andrei; Gorbunova, Vera; Clish, Clary B; Miller, Richard A; Gladyshev, Vadim N | eLife. | 2016 Nov 22; | 27874830 | |
| A Critical and Comparative Review of Fluorescent Tools for Live-Cell Imaging. | Specht, Elizabeth A; Braselmann, Esther; Palmer, Amy E | Annual review of physiology. | 2017 02 10; | 27860833 | |
| The Lymphatic System: Integral Roles in Immunity. | Randolph, Gwendalyn J; Ivanov, Stoyan; Zinselmeyer, Bernd H; Scallan, Joshua P | Annual review of immunology. | 2017 Apr 26; | 27860528 | |
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| Gifts and influence: Conflict of interest policies and prescribing of psychotropic medications in the United States. | King, Marissa; Bearman, Peter S | Social science & medicine (1982). | 2017 01; | 27856120 | |
| Evaluating Public Health Interventions: 5. Causal Inference in Public Health Research-Do Sex, Race, and Biological Factors Cause Health Outcomes? | Glymour, M Maria; Spiegelman, Donna | American journal of public health. | 2017 Jan; | 27854526 | |
| Transcriptomic analysis of instinctive and learned reward-related behaviors in honey bees. | Naeger, Nicholas L; Robinson, Gene E | The Journal of experimental biology. | 2016 11 15; | 27852762 | |
| Going global by adapting local: A review of recent human adaptation. | Fan, Shaohua; Hansen, Matthew E B; Lo, Yancy; Tishkoff, Sarah A | Science (New York, N.Y.). | 2016 10 07; | 27846491 | |
| Light-based Approaches to Cardiac Arrhythmia Research: From Basic Science to Translational Applications. | Karathanos, Thomas V; Boyle, Patrick M; Trayanova, Natalia A | Clinical Medicine Insights. Cardiology. | 2016; | 27840581 | |
| Transcriptomic Profiling Maps Anatomically Patterned Subpopulations among Single Embryonic Cardiac Cells. | Li, Guang; Xu, Adele; Sim, Sopheak; Priest, James R; Tian, Xueying; Khan, Tooba; Quertermous, Thomas; Zhou, Bin; Tsao, Philip S; Quake, Stephen R; Wu, Sean M | Developmental cell. | ; | 27840109 | |
| Design and Construction of Generalizable RNA-Protein Hybrid Controllers by Level-Matched Genetic Signal Amplification. | Wang, Yen-Hsiang; McKeague, Maureen; Hsu, Tammy M; Smolke, Christina D | Cell systems. | ; | 27840078 | |
| Development of pharmacophore models for small molecules targeting RNA: Application to the RNA repeat expansion in myotonic dystrophy type 1. | Angelbello, Alicia J; González, Àlex L; Rzuczek, Suzanne G; Disney, Matthew D | Bioorganic & medicinal chemistry letters. | 2016 Dec 01; | 27839685 | |
| Pupil fluctuations track rapid changes in adrenergic and cholinergic activity in cortex. | Reimer, Jacob; McGinley, Matthew J; Liu, Yang; Rodenkirch, Charles; Wang, Qi; McCormick, David A; Tolias, Andreas S | Nature communications. | 2016 Nov 08; | 27824036 | |
| Generation of Immunity against Pathogens via Single-Domain Antibody-Antigen Constructs. | Duarte, Joao N; Cragnolini, Juan J; Swee, Lee Kim; Bilate, Angelina M; Bader, Justin; Ingram, Jessica R; Rashidfarrokhi, Ali; Fang, Tao; Schiepers, Ariën; Hanke, Leo; Ploegh, Hidde L | Journal of immunology (Baltimore, Md. : 1950). | 2016 12 15; | 27821668 | |
| Multidimensional chemical control of CRISPR-Cas9. | Maji, Basudeb; Moore, Christopher L; Zetsche, Bernd; Volz, Sara E; Zhang, Feng; Shoulders, Matthew D; Choudhary, Amit | Nature chemical biology. | 2017 Jan; | 27820801 | |
| Rapid capture and labeling of cells on single domain antibodies-functionalized flow cell. | Chen, Guan-Yu; Li, Zeyang; Duarte, Joao N; Esteban, Alexandre; Cheloha, Ross W; Theile, Christopher S; Fink, Gerald R; Ploegh, Hidde L | Biosensors & bioelectronics. | 2017 Mar 15; | 27816596 | |
| The Growing and Glowing Toolbox of Fluorescent and Photoactive Proteins. | Rodriguez, Erik A; Campbell, Robert E; Lin, John Y; Lin, Michael Z; Miyawaki, Atsushi; Palmer, Amy E; Shu, Xiaokun; Zhang, Jin; Tsien, Roger Y | Trends in biochemical sciences. | 2017 02; | 27814948 | |
| From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response. | Naumann, Eva A; Fitzgerald, James E; Dunn, Timothy W; Rihel, Jason; Sompolinsky, Haim; Engert, Florian | Cell. | 2016 Nov 3; | 27814522 | |
| Tensor Analysis Reveals Distinct Population Structure that Parallels the Different Computational Roles of Areas M1 and V1. | Seely, Jeffrey S; Kaufman, Matthew T; Ryu, Stephen I; Shenoy, Krishna V; Cunningham, John P; Churchland, Mark M | PLoS computational biology. | 2016 Nov; | 27814353 | |
| Mechanisms of arrhythmogenesis related to calcium-driven alternans in a model of human atrial fibrillation. | Chang, Kelly C; Trayanova, Natalia A | Scientific reports. | 2016 Nov 04; | 27812021 | |
| Mafb lineage tracing to distinguish macrophages from other immune lineages reveals dual identity of Langerhans cells. | Wu, Xiaodi; Briseño, Carlos G; Durai, Vivek; Albring, Jörn C; Haldar, Malay; Bagadia, Prachi; Kim, Ki-Wook; Randolph, Gwendalyn J; Murphy, Theresa L; Murphy, Kenneth M | The Journal of experimental medicine. | 2016 11 14; | 27810926 | |
| Engineering and optimising deaminase fusions for genome editing. | Yang, Luhan; Briggs, Adrian W; Chew, Wei Leong; Mali, Prashant; Guell, Marc; Aach, John; Goodman, Daniel Bryan; Cox, David; Kan, Yinan; Lesha, Emal; Soundararajan, Venkataramanan; Zhang, Feng; Church, George | Nature communications. | 2016 Nov 02; | 27804970 | |
| Fluorescent indicators for simultaneous reporting of all four cell cycle phases. | Bajar, Bryce T; Lam, Amy J; Badiee, Ryan K; Oh, Young-Hee; Chu, Jun; Zhou, Xin X; Kim, Namdoo; Kim, Benjamin B; Chung, Mingyu; Yablonovitch, Arielle L; Cruz, Barney F; Kulalert, Kanokwan; Tao, Jacqueline J; Meyer, Tobias; Su, Xiao-Dong; Lin, Michael Z | Nature methods. | 2016 Dec; | 27798610 | |
| Simultaneous dual-color fluorescence lifetime imaging with novel red-shifted fluorescent proteins. | Laviv, Tal; Kim, Benjamin B; Chu, Jun; Lam, Amy J; Lin, Michael Z; Yasuda, Ryohei | Nature methods. | 2016 Dec; | 27798609 | |
| DNA Repair Capacity in Multiple Pathways Predicts Chemoresistance in Glioblastoma Multiforme. | Nagel, Zachary D; Kitange, Gaspar J; Gupta, Shiv K; Joughin, Brian A; Chaim, Isaac A; Mazzucato, Patrizia; Lauffenburger, Douglas A; Sarkaria, Jann N; Samson, Leona D | Cancer research. | 2017 01 01; | 27793847 | |
| A Disease or Not a Disease? Aging As a Pathology. | Gladyshev, Timothy V; Gladyshev, Vadim N | Trends in molecular medicine. | 2016 Dec; | 27793599 | |
| The capillary bed offers the largest hemodynamic resistance to the cortical blood supply. | Gould, Ian Gopal; Tsai, Philbert; Kleinfeld, David; Linninger, Andreas | Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism. | 2017 Jan; | 27780904 | |
| Use of a single xenon flash lamp for photoacoustic computed tomography of multiple-centimeter-thick biological tissue ex vivo and a whole mouse body in vivo. | Wong, Terence T W; Zhou, Yong; Garcia-Uribe, Alejandro; Li, Lei; Maslov, Konstantin; Lin, Li; Wang, Lihong V | Journal of biomedical optics. | 2017 Apr 01; | 27775747 | |
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| Molecular basis of caspase-1 polymerization and its inhibition by a new capping mechanism. | Lu, Alvin; Li, Yang; Schmidt, Florian I; Yin, Qian; Chen, Shuobing; Fu, Tian-Min; Tong, Alexander B; Ploegh, Hidde L; Mao, Youdong; Wu, Hao | Nature structural & molecular biology. | 2016 May; | 27043298 | |
| HSF1 critically attunes proteotoxic stress sensing by mTORC1 to combat stress and promote growth. | Su, Kuo-Hui; Cao, Junyue; Tang, Zijian; Dai, Siyuan; He, Yishu; Sampson, Stephen Byers; Benjamin, Ivor J; Dai, Chengkai | Nature cell biology. | 2016 05; | 27043084 | |
| Fluorogenic Real-Time Reporters of DNA Repair by MGMT, a Clinical Predictor of Antitumor Drug Response. | Beharry, Andrew A; Nagel, Zachary D; Samson, Leona D; Kool, Eric T | PloS one. | 2016; | 27035132 | |
| Sperm is epigenetically programmed to regulate gene transcription in embryos. | Teperek, Marta; Simeone, Angela; Gaggioli, Vincent; Miyamoto, Kei; Allen, George E; Erkek, Serap; Kwon, Taejoon; Marcotte, Edward M; Zegerman, Philip; Bradshaw, Charles R; Peters, Antoine H F M; Gurdon, John B; Jullien, Jerome | Genome research. | 2016 Mar 31; | 27034506 | |
| Defining Molecular Basis for Longevity Traits in Natural Yeast Isolates. | Kaya, Alaattin; Ma, Siming; Wasko, Brian; Lee, Mitchell; Kaeberlein, Matt; Gladyshev, Vadim N | npj aging and mechanisms of disease. | 2015; | 27030810 | |
| Identification of chemicals that mimic transcriptional changes associated with autism, brain aging and neurodegeneration. | Pearson, Brandon L; Simon, Jeremy M; McCoy, Eric S; Salazar, Gabriela; Fragola, Giulia; Zylka, Mark J | Nature communications. | 2016; | 27029645 | |
| Astrocyte scar formation aids central nervous system axon regeneration. | Anderson, Mark A; Burda, Joshua E; Ren, Yilong; Ao, Yan; O'Shea, Timothy M; Kawaguchi, Riki; Coppola, Giovanni; Khakh, Baljit S; Deming, Timothy J; Sofroniew, Michael V | Nature. | 2016 Apr 14; | 27027288 | |
| Cooperative Subnetworks of Molecularly Similar Interneurons in Mouse Neocortex. | Karnani, Mahesh M; Jackson, Jesse; Ayzenshtat, Inbal; Tucciarone, Jason; Manoocheri, Kasra; Snider, William G; Yuste, Rafael | Neuron. | 2016 Apr 6; | 27021171 | |
| Opening Holes in the Blanket of Inhibition: Localized Lateral Disinhibition by VIP Interneurons. | Karnani, Mahesh M; Jackson, Jesse; Ayzenshtat, Inbal; Hamzehei Sichani, Azadeh; Manoocheri, Kasra; Kim, Samuel; Yuste, Rafael | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Mar 23; | 27013676 | |
| Dysfunctional Calcium and Glutamate Signaling in Striatal Astrocytes from Huntington's Disease Model Mice. | Jiang, Ruotian; Diaz-Castro, Blanca; Looger, Loren L; Khakh, Baljit S | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Mar 23; | 27013675 | |
| Exploring Polypharmacology in Drug Discovery and Repurposing Using the CANDO Platform. | Chopra, Gaurav; Samudrala, Ram | Current pharmaceutical design. | 2016; | 27013226 | |
| Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion. | Dunn, Timothy W; Mu, Yu; Narayan, Sujatha; Randlett, Owen; Naumann, Eva A; Yang, Chao-Tsung; Schier, Alexander F; Freeman, Jeremy; Engert, Florian; Ahrens, Misha B | eLife. | 2016 Mar 22; | 27003593 | |
| CCR7 and IRF4-dependent dendritic cells regulate lymphatic collecting vessel permeability. | Ivanov, Stoyan; Scallan, Joshua P; Kim, Ki-Wook; Werth, Kathrin; Johnson, Michael W; Saunders, Brian T; Wang, Peter L; Kuan, Emma L; Straub, Adam C; Ouhachi, Melissa; Weinstein, Erica G; Williams, Jesse W; Briseño, Carlos; Colonna, Marco; Isakson, Brant E | The Journal of clinical investigation. | 2016 Apr 1; | 26999610 | |
| A role for the bacterial GATC methylome in antibiotic stress survival. | Cohen, Nadia R; Ross, Christian A; Jain, Saloni; Shapiro, Rebecca S; Gutierrez, Arnaud; Belenky, Peter; Li, Hu; Collins, James J | Nature genetics. | 2016 05; | 26998690 | |
| Regenerative Engineering of Cartilage Using Adipose-Derived Stem Cells. | Kasir, Rafid; Vernekar, Varadraj N; Laurencin, Cato T | Regenerative engineering and translational medicine. | 2015 Dec 1; | 26998511 | |
| Physostigmine and Methylphenidate Induce Distinct Arousal States During Isoflurane General Anesthesia in Rats. | Kenny, Jonathan D; Chemali, Jessica J; Cotten, Joseph F; Van Dort, Christa J; Kim, Seong-Eun; Ba, Demba; Taylor, Norman E; Brown, Emery N; Solt, Ken | Anesthesia and analgesia. | 2016 Mar 17; | 26991753 | |
| Revisiting Preadolescent Cardiomyocyte Proliferation in Mice. | Hirai, Maretoshi; Cattaneo, Paola; Chen, Ju; Evans, Sylvia M | Circulation research. | 2016 Mar 18; | 26987912 | |
| REGENERATIVE ENGINEERING: APPROACHES TO LIMB REGENERATION AND OTHER GRAND CHALLENGES. | Laurencin, Cato T; Nair, Lakshmi S | Regenerative engineering and translational medicine. | 2015 Apr 1; | 26985451 | |
| Phenalenone Polyketide Cyclization Catalyzed by Fungal Polyketide Synthase and Flavin-Dependent Monooxygenase. | Gao, Shu-Shan; Duan, Abing; Xu, Wei; Yu, Peiyuan; Hang, Leibniz; Houk, K N; Tang, Yi | Journal of the American Chemical Society. | 2016 Mar 22; | 26978228 | |
| Focusing light through scattering media by full-polarization digital optical phase conjugation. | Shen, Yuecheng; Liu, Yan; Ma, Cheng; Wang, Lihong V | Optics letters. | 2016 Mar 15; | 26977651 | |
| Hybrid Microscopy: Enabling Inexpensive High-Performance Imaging through Combined Physical and Optical Magnifications. | Zhang, Yu Shrike; Chang, Jae-Byum; Alvarez, Mario Moisés; Trujillo-de Santiago, Grissel; Aleman, Julio; Batzaya, Byambaa; Krishnadoss, Vaishali; Ramanujam, Aishwarya Aravamudhan; Kazemzadeh-Narbat, Mehdi; Chen, Fei; Tillberg, Paul W; Dokmeci, Mehmet Remzi | Scientific reports. | 2016; | 26975883 | |
| Spike sorting for large, dense electrode arrays. | Rossant, Cyrille; Kadir, Shabnam N; Goodman, Dan F M; Schulman, John; Hunter, Maximilian L D; Saleem, Aman B; Grosmark, Andres; Belluscio, Mariano; Denfield, George H; Ecker, Alexander S; Tolias, Andreas S; Solomon, Samuel; Buzsaki, Gyorgy; Carandini, Matteo; Harris, Kenneth D | Nature neuroscience. | 2016 Apr; | 26974951 | |
| Calcium imaging of neural circuits with extended depth-of-field light-sheet microscopy. | Quirin, Sean; Vladimirov, Nikita; Yang, Chao-Tsung; Peterka, Darcy S; Yuste, Rafael; B Ahrens, Misha | Optics letters. | 2016 Mar 1; | 26974063 | |
| Opportunities in the design and application of RNA for gene expression control. | McKeague, Maureen; Wong, Remus S; Smolke, Christina D | Nucleic acids research. | 2016 Apr 20; | 26969733 | |
| P450-Mediated Coupling of Indole Fragments To Forge Communesin and Unnatural Isomers. | Lin, Hsiao-Ching; McMahon, Travis C; Patel, Ashay; Corsello, Michael; Simon, Adam; Xu, Wei; Zhao, Muxun; Houk, K N; Garg, Neil K; Tang, Yi | Journal of the American Chemical Society. | 2016 Mar 18; | 26963294 | |
| VIP+ interneurons control neocortical activity across brain states. | Jackson, Jesse; Ayzenshtat, Inbal; Karnani, Mahesh M; Yuste, Rafael | Journal of neurophysiology. | 2016 Jun 1; | 26961109 | |
| Combinatorial Generation of Chemical Diversity by Redox Enzymes in Chaetoviridin Biosynthesis. | Sato, Michio; Winter, Jaclyn M; Kishimoto, Shinji; Noguchi, Hiroshi; Tang, Yi; Watanabe, Kenji | Organic letters. | 2016 Mar 18; | 26959241 | |
| Biosynthesis of the ?-nitro-containing cyclic tripeptide psychrophilin. | Zhao, Muxun; Lin, Hsiao-Ching; Tang, Yi | The Journal of antibiotics. | 2016 Jul; | 26956794 | |
| The use of (18)F-2-fluorodeoxyglucose (FDG) to label antibody fragments for immuno-PET of pancreatic cancer. | Rashidian, Mohammad; Keliher, Edmund; Dougan, Michael; Juras, Patrick K; Cavallari, Marco; Wojtkiewicz, Gregory R; Jacobsen, Johanne; Edens, Jerre G; Tas, Jeroen M G; Victora, Gabriel; Weissleder, Ralph; Ploegh, Hidde | ACS central science. | 2015 Jun 24; | 26955657 | |
| Using synthetic biology to make cells tomorrow's test tubes. | Garcia, Hernan G; Brewster, Robert C; Phillips, Rob | Integrative biology : quantitative biosciences from nano to macro. | 2016 Apr 18; | 26952708 | |
| Crystal structure of a substrate-engaged SecY protein-translocation channel. | Li, Long; Park, Eunyong; Ling, JingJing; Ingram, Jessica; Ploegh, Hidde; Rapoport, Tom A | Nature. | 2016 Mar 17; | 26950603 | |
| Novel Dopamine Therapeutics for Cognitive Deficits in Schizophrenia. | Arnsten, Amy F T; Girgis, Ragy R; Gray, David L; Mailman, Richard B | Biological psychiatry. | 2016 Jan 18; | 26946382 | |
| A Locus at 5q33.3 Confers Resistance to Tuberculosis in Highly Susceptible Individuals. | Sobota, Rafal S; Stein, Catherine M; Kodaman, Nuri; Scheinfeldt, Laura B; Maro, Isaac; Wieland-Alter, Wendy; Igo Jr, Robert P; Magohe, Albert; Malone, LaShaunda L; Chervenak, Keith; Hall, Noemi B; Modongo, Chawangwa; Zetola, Nicola; Matee, Mecky; Joloba, Moses; Froment, Alain; Nyambo, Thomas B; Moore, Jason H; Scott, William K; Lahey, Timothy; Boom, W Henry; von Reyn, C Fordham; Tishkoff, Sarah A; Sirugo, Giorgio; Williams, Scott M | American journal of human genetics. | 2016 Mar 03; | 26942285 | |
| Neurovascular and Immuno-Imaging: From Mechanisms to Therapies. Proceedings of the Inaugural Symposium. | Akassoglou, Katerina; Agalliu, Dritan; Chang, Christopher J; Davalos, Dimitrios; Grutzendler, Jaime; Hillman, Elizabeth M C; Khakh, Baljit S; Kleinfeld, David; McGavern, Dorian B; Nelson, Sarah J; Zlokovic, Berislav V | Frontiers in neuroscience. | 2016; | 26941593 | |
| Opsin spectral sensitivity determines the effectiveness of optogenetic termination of ventricular fibrillation in the human heart: A simulation study. | Karathanos, Thomas V; Bayer, Jason D; Wang, Dafang; Boyle, Patrick M; Trayanova, Natalia A | The Journal of physiology. | 2016 Mar 4; | 26941055 | |
| Wireless Cortical Brain-Machine Interface for Whole-Body Navigation in Primates. | Rajangam, Sankaranarayani; Tseng, Po-He; Yin, Allen; Lehew, Gary; Schwarz, David; Lebedev, Mikhail A; Nicolelis, Miguel A L | Scientific reports. | 2016; | 26938468 | |
| Assembly and operation of the autopatcher for automated intracellular neural recording in vivo. | Kodandaramaiah, Suhasa B; Holst, Gregory L; Wickersham, Ian R; Singer, Annabelle C; Franzesi, Giovanni Talei; McKinnon, Michael L; Forest, Craig R; Boyden, Edward S | Nature protocols. | 2016 Apr; | 26938115 | |
| UVnovo: A de Novo Sequencing Algorithm Using Single Series of Fragment Ions via Chromophore Tagging and 351 nm Ultraviolet Photodissociation Mass Spectrometry. | Robotham, Scott A; Horton, Andrew P; Cannon, Joe R; Cotham, Victoria C; Marcotte, Edward M; Brodbelt, Jennifer S | Analytical chemistry. | 2016 Apr 5; | 26938041 | |
| Shorter telomere length in Europeans than in Africans due to polygenetic adaptation. | Hansen, Matthew E B; Hunt, Steven C; Stone, Rivka C; Horvath, Kent; Herbig, Utz; Ranciaro, Alessia; Hirbo, Jibril; Beggs, William; Reiner, Alexander P; Wilson, James G; Kimura, Masayuki; De Vivo, Immaculata; Chen, Maxine M; Kark, Jeremy D; Levy, Daniel; Nyambo, Thomas; Tishkoff, Sarah A; Aviv, Abraham | Human molecular genetics. | 2016 06 01; | 26936823 | |
| Reactivation of Latent HIV-1 Expression by Engineered TALE Transcription Factors. | Perdigão, Pedro; Gaj, Thomas; Santa-Marta, Mariana; Barbas 3rd, Carlos F; Goncalves, Joao | PloS one. | 2016; | 26933881 | |
| An automatic experimental apparatus to study arm reaching in New World monkeys. | Yin, Allen; An, Jehi; Lehew, Gary; Lebedev, Mikhail A; Nicolelis, Miguel A L | Journal of neuroscience methods. | 2016 May 1; | 26928257 | |
| Frequency fluctuations in silicon nanoresonators. | Sansa, Marc; Sage, Eric; Bullard, Elizabeth C; Gély, Marc; Alava, Thomas; Colinet, Eric; Naik, Akshay K; Villanueva, Luis Guillermo; Duraffourg, Laurent; Roukes, Michael L; Jourdan, Guillaume; Hentz, Sébastien | Nature nanotechnology. | 2016 Jun; | 26925826 | |
| Intravenous immune globulin suppresses angiogenesis in mice and humans. | Yasuma, Reo; Cicatiello, Valeria; Mizutani, Takeshi; Tudisco, Laura; Kim, Younghee; Tarallo, Valeria; Bogdanovich, Sasha; Hirano, Yoshio; Kerur, Nagaraj; Li, Shengjian; Yasuma, Tetsuhiro; Fowler, Benjamin J; Wright, Charles B; Apicella, Ivana; Greco, Adelaide; Brunetti, Arturo; Ambati, Balamurali K; Helmers, Sevim Barbasso; Lundberg, Ingrid E; Viklicky, Ondrej; Leusen, Jeanette Hw; Verbeek, J Sjef; Gelfand, Bradley D; Bastos-Carvalho, Ana; De Falco, Sandro; Ambati, Jayakrishna | Signal transduction and targeted therapy. | 2016; | 26925256 | |
| Alzheimer's Disease Risk Polymorphisms Regulate Gene Expression in the ZCWPW1 and the CELF1 Loci. | Karch, Celeste M; Ezerskiy, Lubov A; Bertelsen, Sarah; Alzheimer?s Disease Genetics Consortium (ADGC); Goate, Alison M | PloS one. | 2016; | 26919393 | |
| Human IgG1 antibodies suppress angiogenesis in a target-independent manner. | Bogdanovich, Sasha; Kim, Younghee; Mizutani, Takeshi; Yasuma, Reo; Tudisco, Laura; Cicatiello, Valeria; Bastos-Carvalho, Ana; Kerur, Nagaraj; Hirano, Yoshio; Baffi, Judit Z; Tarallo, Valeria; Li, Shengjian; Yasuma, Tetsuhiro; Arpitha, Parthasarathy; Fowler, Benjamin J; Wright, Charles B; Apicella, Ivana; Greco, Adelaide; Brunetti, Arturo; Ruvo, Menotti; Sandomenico, Annamaria; Nozaki, Miho; Ijima, Ryo; Kaneko, Hiroki; Ogura, Yuichiro; Terasaki, Hiroko; Ambati, Balamurali K; Leusen, Jeanette Hw; Langdon, Wallace Y; Clark, Michael R; Armour, Kathryn L; Bruhns, Pierre; Verbeek, J Sjef; Gelfand, Bradley D; De Falco, Sandro; Ambati, Jayakrishna | Signal transduction and targeted therapy. | 2016; | 26918197 | |
| Association of Left Atrial Local Conduction Velocity With Late Gadolinium Enhancement on Cardiac Magnetic Resonance in Patients With Atrial Fibrillation. | Fukumoto, Kotaro; Habibi, Mohammadali; Ipek, Esra Gucuk; Zahid, Sohail; Khurram, Irfan M; Zimmerman, Stefan L; Zipunnikov, Vadim; Spragg, David; Ashikaga, Hiroshi; Trayanova, Natalia; Tomaselli, Gordon F; Rickard, John; Marine, Joseph E; Berger, Ronald D; | Circulation. Arrhythmia and electrophysiology. | 2016 Mar; | 26917814 | |
| Synchronous Drosophila circadian pacemakers display nonsynchronous Ca²? rhythms in vivo. | Liang, Xitong; Holy, Timothy E; Taghert, Paul H | Science (New York, N.Y.). | 2016 Feb 26; | 26917772 | |
| Hypoxia as a therapy for mitochondrial disease. | Jain, Isha H; Zazzeron, Luca; Goli, Rahul; Alexa, Kristen; Schatzman-Bone, Stephanie; Dhillon, Harveen; Goldberger, Olga; Peng, Jun; Shalem, Ophir; Sanjana, Neville E; Zhang, Feng; Goessling, Wolfram; Zapol, Warren M; Mootha, Vamsi K | Science (New York, N.Y.). | 2016 Apr 1; | 26917594 | |
| Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes. | Solomon, Kevin V; Haitjema, Charles H; Henske, John K; Gilmore, Sean P; Borges-Rivera, Diego; Lipzen, Anna; Brewer, Heather M; Purvine, Samuel O; Wright, Aaron T; Theodorou, Michael K; Grigoriev, Igor V; Regev, Aviv; Thompson, Dawn A; O'Malley, Michelle A | Science (New York, N.Y.). | 2016 Mar 11; | 26912365 | |
| Embedding a Panoramic Representation of Infrared Light in the Adult Rat Somatosensory Cortex through a Sensory Neuroprosthesis. | Hartmann, Konstantin; Thomson, Eric E; Zea, Ivan; Yun, Richy; Mullen, Peter; Canarick, Jay; Huh, Albert; Nicolelis, Miguel A L | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Feb 24; | 26911689 | |
| Temporal modulation of collective cell behavior controls vascular network topology. | Kur, Esther; Kim, Jiha; Tata, Aleksandra; Comin, Cesar H; Harrington, Kyle I; Costa, Luciano da F; Bentley, Katie; Gu, Chenghua | eLife. | 2016 Feb 24; | 26910011 | |
| moco: Fast Motion Correction for Calcium Imaging. | Dubbs, Alexander; Guevara, James; Yuste, Rafael | Frontiers in neuroinformatics. | 2016; | 26909035 | |
| Quantitative Multiscale Cell Imaging in Controlled 3D Microenvironments. | Welf, Erik S; Driscoll, Meghan K; Dean, Kevin M; Schäfer, Claudia; Chu, Jun; Davidson, Michael W; Lin, Michael Z; Danuser, Gaudenz; Fiolka, Reto | Developmental cell. | 2016 Feb 22; | 462-75 | 26906741 |
| Contrasting responses within a single neuron class enable sex-specific attraction in Caenorhabditis elegans. | Narayan, Anusha; Venkatachalam, Vivek; Durak, Omer; Reilly, Douglas K; Bose, Neelanjan; Schroeder, Frank C; Samuel, Aravinthan D T; Srinivasan, Jagan; Sternberg, Paul W | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Mar 08; | 26903633 | |
| Shooting for the Moon: Nanoscale Approaches to Cancer. | Hammond, Paula T | ACS nano. | 2016 Feb 23; | 26902596 | |
| Smooth muscle origin of postnatal 2nd CVP is pre-determined in early embryo. | Liu, Qiaozhen; Zhang, Hui; Tian, Xueying; He, Lingjuan; Huang, Xiuzhen; Tan, Zhen; Yan, Yan; Evans, Sylvia M; Wythe, Joshua D; Zhou, Bin | Biochemical and biophysical research communications. | 2016 Mar 18; | 26902114 | |
| Probing the Complexities of Astrocyte Calcium Signaling. | Shigetomi, Eiji; Patel, Sandip; Khakh, Baljit S | Trends in cell biology. | 2016 Feb 16; | 26896246 | |
| Intermittent drivers anchoring to structural heterogeneities as a major pathophysiological mechanism of human persistent atrial fibrillation. | Haissaguerre, Michel; Shah, Ashok J; Cochet, Hubert; Hocini, Meleze; Dubois, Remi; Efimov, Igor; Vigmond, Edward; Bernus, Olivier; Trayanova, Natalia | The Journal of physiology. | 2016 May 1; | 26890861 | |
| Membrane Potential Dynamics of CA1 Pyramidal Neurons during Hippocampal Ripples in Awake Mice. | Hulse, Brad K; Moreaux, Laurent C; Lubenov, Evgueniy V; Siapas, Athanassios G | Neuron. | 2016 Feb 17; | 800-13 | 26889811 |
| Model-based analyses of whole-genome data reveal a complex evolutionary history involving archaic introgression in Central African Pygmies. | Hsieh, PingHsun; Woerner, August E; Wall, Jeffrey D; Lachance, Joseph; Tishkoff, Sarah A; Gutenkunst, Ryan N; Hammer, Michael F | Genome research. | 2016 Mar; | 26888264 | |
| Whole-genome sequence analyses of Western Central African Pygmy hunter-gatherers reveal a complex demographic history and identify candidate genes under positive natural selection. | Hsieh, PingHsun; Veeramah, Krishna R; Lachance, Joseph; Tishkoff, Sarah A; Wall, Jeffrey D; Hammer, Michael F; Gutenkunst, Ryan N | Genome research. | 2016 Mar; | 26888263 | |
| Evaluating Public Health Interventions: 2. Stepping Up to Routine Public Health Evaluation With the Stepped Wedge Design. | Spiegelman, Donna | American journal of public health. | 2016 Mar; | 26885961 | |
| Photoacoustic microscopy of arteriovenous shunts and blood diffusion in early-stage tumors. | Yeh, Chenghung; Liang, Jinyang; Zhou, Yong; Hu, Song; Sohn, Rebecca E; Arbeit, Jeffrey M; Wang, Lihong V | Journal of biomedical optics. | 2016 Feb; | 26882446 | |
| Discovery of 2-Indole-acylsulfonamide Myeloid Cell Leukemia 1 (Mcl-1) Inhibitors Using Fragment-Based Methods. | Pelz, Nicholas F; Bian, Zhiguo; Zhao, Bin; Shaw, Subrata; Tarr, James C; Belmar, Johannes; Gregg, Claire; Camper, DeMarco V; Goodwin, Craig M; Arnold, Allison L; Sensintaffar, John L; Friberg, Anders; Rossanese, Olivia W; Lee, Taekyu; Olejniczak, Edward T; Fesik, Stephen W | Journal of medicinal chemistry. | 2016 Mar 10; | 26878343 | |
| Structure and Engineering of Francisella novicida Cas9. | Hirano, Hisato; Gootenberg, Jonathan S; Horii, Takuro; Abudayyeh, Omar O; Kimura, Mika; Hsu, Patrick D; Nakane, Takanori; Ishitani, Ryuichiro; Hatada, Izuho; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu | Cell. | 2016 Feb 25; | 26875867 | |
| Regenerative Medicine: Potential Mechanisms of Cardiac Recovery in Takotsubo Cardiomyopathy. | Chang, Andrew Y; Kittle, Jessie T; Wu, Sean M | Current treatment options in cardiovascular medicine. | 2016 Mar; | 26874708 | |
| Photoacoustic elastography. | Hai, Pengfei; Yao, Junjie; Li, Guo; Li, Chiye; Wang, Lihong V | Optics letters. | 2016 Feb 15; | 26872173 | |
| Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes. | Phanse, Sadhna; Wan, Cuihong; Borgeson, Blake; Tu, Fan; Drew, Kevin; Clark, Greg; Xiong, Xuejian; Kagan, Olga; Kwan, Julian; Bezginov, Alexandr; Chessman, Kyle; Pal, Swati; Cromar, Graham; Papoulas, Ophelia; Ni, Zuyao; Boutz, Daniel R; Stoilova, Snejana; | Data in brief. | 2016 Mar; | 26870755 | |
| Multimodal stimulus coding by a gustatory sensory neuron in Drosophila larvae. | van Giesen, Lena; Hernandez-Nunez, Luis; Delasoie-Baranek, Sophie; Colombo, Martino; Renaud, Philippe; Bruggmann, Rémy; Benton, Richard; Samuel, Aravinthan D T; Sprecher, Simon G | Nature communications. | 2016 Feb 11; | 26864722 | |
| Design of a mobile, homogeneous, and efficient electromagnet with a large field of view for neonatal low-field MRI. | Lother, Steffen; Schiff, Steven J; Neuberger, Thomas; Jakob, Peter M; Fidler, Florian | Magma (New York, N.Y.). | 2016 Aug; | 26861046 | |
| Cytosolic NADH-NAD+ redox visualized in brain slices by two-photon fluorescence lifetime biosensor imaging. | Mongeon, Rebecca; Venkatachalam, Veena; Yellen, Gary | Antioxidants & redox signaling. | 2016 Feb 9; | 26857245 | |
| Saccharomyces cerevisiae as a tool for mining, studying and engineering fungal polyketide synthases. | Bond, Carly; Tang, Yi; Li, Li | Fungal genetics and biology : FG & B. | 2016 Feb 2; | 26850128 | |
| Clostridium difficile associated risk of death score (CARDS): a novel severity score to predict mortality among hospitalised patients with C. difficile infection. | Kassam, Z; Cribb Fabersunne, C; Smith, M B; Alm, E J; Kaplan, G G; Nguyen, G C; Ananthakrishnan, A N | Alimentary pharmacology & therapeutics. | 2016 Mar; | 26849527 | |
| Computational models of heart disease. | Smith, Nic; Trayanova, Natalia | Drug discovery today. Disease models. | 2014; | 2-Jan | 26843884 |
| On the Structure of Neuronal Population Activity under Fluctuations in Attentional State. | Ecker, Alexander S; Denfield, George H; Bethge, Matthias; Tolias, Andreas S | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Feb 3; | 26843656 | |
| Structurally Defined ?MHC-II Nanobody-Drug Conjugates: A Therapeutic and Imaging System for B-Cell Lymphoma. | Fang, Tao; Duarte, Joao N; Ling, Jingjing; Li, Zeyang; Guzman, Jonathan S; Ploegh, Hidde L | Angewandte Chemie (International ed. in English). | 2016 Feb 12; | 26840214 | |
| Animal models of osteoarthritis: classification, update, and measurement of outcomes. | Kuyinu, Emmanuel L; Narayanan, Ganesh; Nair, Lakshmi S; Laurencin, Cato T | Journal of orthopaedic surgery and research. | 2016; | 26837951 | |
| Particles for Local Delivery of Proteins Using Intra-Articular Route. | Khodabandehlou, Khosrow; Tian, Shaomin; Luft, James C; Khan, Saad A; DeSimone, Joseph M | Advanced healthcare materials. | 2016 Mar; | 26833828 | |
| Precisely parameterized experimental and computational models of tissue organization. | Molitoris, Jared M; Paliwal, Saurabh; Sekar, Rajesh B; Blake, Robert; Park, JinSeok; Trayanova, Natalia A; Tung, Leslie; Levchenko, Andre | Integrative biology : quantitative biosciences from nano to macro. | 2016 Feb; | 26822672 | |
| Engineering nanolayered particles for modular drug delivery. | Correa, Santiago; Dreaden, Erik C; Gu, Li; Hammond, Paula T | Journal of controlled release : official journal of the Controlled Release Society. | 2016 Oct 28; | 26809005 | |
| Tudor-SN Interacts with Piwi Antagonistically in Regulating Spermatogenesis but Synergistically in Silencing Transposons in Drosophila. | Ku, Hsueh-Yen; Gangaraju, Vamsi K; Qi, Hongying; Liu, Na; Lin, Haifan | PLoS genetics. | 2016 Jan; | 26808625 | |
| Genes with monoallelic expression contribute disproportionately to genetic diversity in humans. | Savova, Virginia; Chun, Sung; Sohail, Mashaal; McCole, Ruth B; Witwicki, Robert; Gai, Lisa; Lenz, Tobias L; Wu, C-ting; Sunyaev, Shamil R; Gimelbrant, Alexander A | Nature genetics. | 2016 Mar; | 26808112 | |
| Neural Circuits Underlying Visually Evoked Escapes in Larval Zebrafish. | Dunn, Timothy W; Gebhardt, Christoph; Naumann, Eva A; Riegler, Clemens; Ahrens, Misha B; Engert, Florian; Del Bene, Filippo | Neuron. | 2016 Feb 3; | 613-28 | 26804997 |
| Mode of action and resistance studies unveil new roles for tropodithietic acid as an anticancer agent and the ?-glutamyl cycle as a proton sink. | Wilson, Maxwell Z; Wang, Rurun; Gitai, Zemer; Seyedsayamdost, Mohammad R | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Feb 9; | 26802120 | |
| Production of New Cladosporin Analogues by Reconstitution of the Polyketide Synthases Responsible for the Biosynthesis of this Antimalarial Agent. | Cochrane, Rachel V K; Sanichar, Randy; Lambkin, Gareth R; Reiz, Béla; Xu, Wei; Tang, Yi; Vederas, John C | Angewandte Chemie (International ed. in English). | 2016 Jan 11; | 26783060 | |
| Piwi maintains germline stem cells and oogenesis in Drosophila through negative regulation of Polycomb group proteins. | Peng, Jamy C; Valouev, Anton; Liu, Na; Lin, Haifan | Nature genetics. | 2016 Mar; | 26780607 | |
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| Subtumoral analysis of PRINT nanoparticle distribution reveals targeting variation based on cellular and particle properties. | Roode, Luke E; Brighton, Hailey; Bo, Tao; Perry, Jillian L; Parrott, Matthew C; Kersey, Farrell; Luft, J Chris; Bear, James E; DeSimone, Joseph M; Davis, Ian J | Nanomedicine : nanotechnology, biology, and medicine. | 2016 May; | 26772430 | |
| Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin. | Snyder, Matthew W; Kircher, Martin; Hill, Andrew J; Daza, Riza M; Shendure, Jay | Cell. | 2016 Jan 14; | 57-68 | 26771485 |
| Super-resolution imaging reveals distinct chromatin folding for different epigenetic states. | Boettiger, Alistair N; Bintu, Bogdan; Moffitt, Jeffrey R; Wang, Siyuan; Beliveau, Brian J; Fudenberg, Geoffrey; Imakaev, Maxim; Mirny, Leonid A; Wu, Chao-ting; Zhuang, Xiaowei | Nature. | 2016 Jan 21; | 26760202 | |
| Computational discovery of pathway-level genetic vulnerabilities in non-small-cell lung cancer. | Young, Jonathan H; Peyton, Michael; Seok Kim, Hyun; McMillan, Elizabeth; Minna, John D; White, Michael A; Marcotte, Edward M | Bioinformatics (Oxford, England). | 2016 May 1; | 26755624 | |
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