Publications Search by Program
Search Result
The search results on this publication page are automated on a monthly schedule based on acknowledgement of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.
NIH Director's Pioneer Award Program (2782)
| Publication Title | Authors | Journal | Publication Date | Page No | PubMedID |
|---|---|---|---|---|---|
| Effects of 3D culturing conditions on the transcriptomic profile of stem-cell-derived neurons. | Tekin, Halil; Simmons, Sean; Cummings, Beryl; Gao, Linyi; Adiconis, Xian; Hession, Cynthia C; Ghoshal, Ayan; Dionne, Danielle; Choudhury, Sourav R; Yesilyurt, Volkan; Sanjana, Neville E; Shi, Xi; Lu, Congyi; Heidenreich, Matthias; Pan, Jen Q; Levin, Joshu | Nature biomedical engineering. | 2018 Jul; | 30271673 | |
| Cytoplasmic Amplification of Transcriptional Noise Generates Substantial Cell-to-Cell Variability. | Hansen, Maike M K; Desai, Ravi V; Simpson, Michael L; Weinberger, Leor S | Cell systems. | 2018 Sep 11; | 30243562 | |
| RNAs as Proximity-Labeling Media for Identifying Nuclear Speckle Positions Relative to the Genome. | Chen, Weizhong; Yan, Zhangming; Li, Simin; Huang, Norman; Huang, Xuerui; Zhang, Jin; Zhong, Sheng | iScience. | 2018 Jun 29; | 30240742 | |
| Shared understanding of narratives is correlated with shared neural responses. | Nguyen, Mai; Vanderwal, Tamara; Hasson, Uri | NeuroImage. | 2018 Sep 12; | 30217543 | |
| Differential IL-2 expression defines developmental fates of follicular versus nonfollicular helper T cells. | DiToro, Daniel; Winstead, Colleen J; Pham, Duy; Witte, Steven; Andargachew, Rakieb; Singer, Jeffrey R; Wilson, C Garrett; Zindl, Carlene L; Luther, Rita J; Silberger, Daniel J; Weaver, Benjamin T; Kolawole, E Motunrayo; Martinez, Ryan J; Turner, Henrietta | Science (New York, N.Y.). | ; | 30213884 | |
| RNA, Action through Interactions. | Nguyen, Tri C; Zaleta-Rivera, Kathia; Huang, Xuerui; Dai, Xiaofeng; Zhong, Sheng | Trends in genetics : TIG. | 2018 Aug 31; | 30177410 | |
| Reducing Astrocyte Calcium Signaling In Vivo Alters Striatal Microcircuits and Causes Repetitive Behavior. | Yu, Xinzhu; Taylor, Anna M W; Nagai, Jun; Golshani, Peyman; Evans, Christopher J; Coppola, Giovanni; Khakh, Baljit S | Neuron. | 2018 Sep 19; | 30174118 | |
| Three-dimensional genome structures of single diploid human cells. | Tan, Longzhi; Xing, Dong; Chang, Chi-Han; Li, Heng; Xie, X Sunney | Science (New York, N.Y.). | 2018 08 31; | 30166492 | |
| Tropomyosin dynamics during cardiac muscle contraction as governed by a multi-well energy landscape. | Aboelkassem, Yasser; Trayanova, Natalia | Progress in biophysics and molecular biology. | 2018 Aug 22; | 30145015 | |
| Neural Sensing of Organ Volume. | Umans, Benjamin D; Liberles, Stephen D | Trends in neurosciences. | 2018 Aug 21; | 30143276 | |
| Links between environment, diet, and the hunter-gatherer microbiome. | Fragiadakis, Gabriela K; Smits, Samuel A; Sonnenburg, Erica D; Van Treuren, William; Reid, Gregor; Knight, Rob; Manjurano, Alphaxard; Changalucha, John; Dominguez-Bello, Maria Gloria; Leach, Jeff; Sonnenburg, Justin L | Gut microbes. | 2018 Aug 17; | 30118385 | |
| Microbiome: Focus on Causation and Mechanism. | Fischbach, Michael A | Cell. | 2018 Aug 09; | 30096310 | |
| Directed evolution of excited state lifetime and brightness in FusionRed using a microfluidic sorter. | Manna, Premashis; Hung, Sheng-Ting; Mukherjee, Srijit; Friis, Pia; Simpson, David M; Lo, Maria N; Palmer, Amy E; Jimenez, Ralph | Integrative biology : quantitative biosciences from nano to macro. | 2018 Aug 10; | 30094420 | |
| Syringe-injectable Mesh Electronics for Stable Chronic Rodent Electrophysiology. | Schuhmann Jr, Thomas G; Zhou, Tao; Hong, Guosong; Lee, Jung Min; Fu, Tian-Ming; Park, Hong-Gyu; Lieber, Charles M | Journal of visualized experiments : JoVE. | 2018 07 21; | 30080192 | |
| A multicolor riboswitch-based platform for imaging of RNA in live mammalian cells. | Braselmann, Esther; Wierzba, Aleksandra J; Polaski, Jacob T; Chromi?ski, Miko?aj; Holmes, Zachariah E; Hung, Sheng-Ting; Batan, Dilara; Wheeler, Joshua R; Parker, Roy; Jimenez, Ralph; Gryko, Dorota; Batey, Robert T; Palmer, Amy E | Nature chemical biology. | 2018 Oct; | 30061719 | |
| Small RNAs Gained during Epididymal Transit of Sperm Are Essential for Embryonic Development in Mice. | Conine, Colin C; Sun, Fengyun; Song, Lina; Rivera-Pérez, Jaime A; Rando, Oliver J | Developmental cell. | 2018 08 20; | 30057276 | |
| Small RNAs Are Trafficked from the Epididymis to Developing Mammalian Sperm. | Sharma, Upasna; Sun, Fengyun; Conine, Colin C; Reichholf, Brian; Kukreja, Shweta; Herzog, Veronika A; Ameres, Stefan L; Rando, Oliver J | Developmental cell. | 2018 08 20; | 30057273 | |
| Escherichia coli translation strategies differ across carbon, nitrogen and phosphorus limitation conditions. | Li, Sophia Hsin-Jung; Li, Zhiyuan; Park, Junyoung O; King, Christopher G; Rabinowitz, Joshua D; Wingreen, Ned S; Gitai, Zemer | Nature microbiology. | 2018 Aug; | 30038306 | |
| Mapping the Genetic Landscape of Human Cells. | Horlbeck, Max A; Xu, Albert; Wang, Min; Bennett, Neal K; Park, Chong Y; Bogdanoff, Derek; Adamson, Britt; Chow, Eric D; Kampmann, Martin; Peterson, Tim R; Nakamura, Ken; Fischbach, Michael A; Weissman, Jonathan S; Gilbert, Luke A | Cell. | 2018 Aug 09; | 30033366 | |
| Enzymatic one-step ring contraction for quinolone biosynthesis. | Kishimoto, Shinji; Hara, Kodai; Hashimoto, Hiroshi; Hirayama, Yuichiro; Champagne, Pier Alexandre; Houk, Kendall N; Tang, Yi; Watanabe, Kenji | Nature communications. | 2018 Jul 19; | 30026518 | |
| GIVE: portable genome browsers for personal websites. | Cao, Xiaoyi; Yan, Zhangming; Wu, Qiuyang; Zheng, Alvin; Zhong, Sheng | Genome biology. | 2018 07 18; | 30016975 | |
| Spreading depolarizations trigger caveolin-1-dependent endothelial transcytosis. | Sadeghian, Homa; Lacoste, Baptiste; Qin, Tao; Toussay, Xavier; Rosa, Roberto; Oka, Fumiaki; Chung, David Y; Takizawa, Tsubasa; Gu, Chenghua; Ayata, Cenk | Annals of neurology. | 2018 Sep; | 30014540 | |
| PKC? integrates spatiotemporally distinct Ca2+ and autocrine BDNF signaling to facilitate synaptic plasticity. | Colgan, Lesley A; Hu, Mo; Misler, Jaime A; Parra-Bueno, Paula; Moran, Corey M; Leitges, Michael; Yasuda, Ryohei | Nature neuroscience. | 2018 Aug; | 30013171 | |
| Resistance-gene-directed discovery of a natural-product herbicide with a new mode of action. | Yan, Yan; Liu, Qikun; Zang, Xin; Yuan, Shuguang; Bat-Erdene, Undramaa; Nguyen, Calvin; Gan, Jianhua; Zhou, Jiahai; Jacobsen, Steven E; Tang, Yi | Nature. | 2018 Jul; | 29995859 | |
| A Temperature Gradient Assay to Determine Thermal Preferences of Drosophila Larvae. | Liu, Jiangqu; Sokabe, Takaaki; Montell, Craig | Journal of visualized experiments : JoVE. | ; | 29985331 | |
| FlashFry: a fast and flexible tool for large-scale CRISPR target design. | McKenna, Aaron; Shendure, Jay | BMC biology. | 2018 Jul 05; | 29976198 | |
| Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment. | Azizi, Elham; Carr, Ambrose J; Plitas, George; Cornish, Andrew E; Konopacki, Catherine; Prabhakaran, Sandhya; Nainys, Juozas; Wu, Kenmin; Kiseliovas, Vaidotas; Setty, Manu; Choi, Kristy; Fromme, Rachel M; Dao, Phuong; McKenney, Peter T; Wasti, Ruby C; Kad | Cell. | 2018 Aug 23; | 29961579 | |
| Four Key Steps Control Glycolytic Flux in Mammalian Cells. | Tanner, Lukas Bahati; Goglia, Alexander G; Wei, Monica H; Sehgal, Talen; Parsons, Lance R; Park, Junyoung O; White, Eileen; Toettcher, Jared E; Rabinowitz, Joshua D | Cell systems. | 2018 Jul 25; | 29960885 | |
| A method for single-neuron chronic recording from the retina in awake mice. | Hong, Guosong; Fu, Tian-Ming; Qiao, Mu; Viveros, Robert D; Yang, Xiao; Zhou, Tao; Lee, Jung Min; Park, Hong-Gyu; Sanes, Joshua R; Lieber, Charles M | Science (New York, N.Y.). | 2018 Jun 29; | 29954976 | |
| Reassessment of c-Kit in Cardiac Cells: A Complex Interplay Between Expression, Fate, and Function. | Zhou, Bin; Wu, Sean M | Circulation research. | 2018 Jun 22; | 29929968 | |
| MIN1PIPE: A Miniscope 1-Photon-Based Calcium Imaging Signal Extraction Pipeline. | Lu, Jinghao; Li, Chunyuan; Singh-Alvarado, Jonnathan; Zhou, Zhe Charles; Fröhlich, Flavio; Mooney, Richard; Wang, Fan | Cell reports. | 2018 Jun 19; | 29925007 | |
| Limited Macrophage Positional Dynamics in Progressing or Regressing Murine Atherosclerotic Plaques. | Williams, Jesse W; Martel, Catherine; Potteaux, Stephane; Esaulova, Ekaterina; Ingersoll, Molly A; Elvington, Andrew; Saunders, Brian T; Huang, Li-Hao; Habenicht, Andreas J; Zinselmeyer, Bernd H; Randolph, Gwendalyn J | Arteriosclerosis, thrombosis, and vascular biology. | ; | 29903736 | |
| Elucidating relations between fMRI, ECoG, and EEG through a common natural stimulus. | Haufe, Stefan; DeGuzman, Paul; Henin, Simon; Arcaro, Michael; Honey, Christopher J; Hasson, Uri; Parra, Lucas C | NeuroImage. | 2018 Oct 01; | 29902585 | |
| Bright quantum dots emitting at ?1,600 nm in the NIR-IIb window for deep tissue fluorescence imaging. | Zhang, Mingxi; Yue, Jingying; Cui, Ran; Ma, Zhuoran; Wan, Hao; Wang, Feifei; Zhu, Shoujun; Zhou, Ying; Kuang, Yun; Zhong, Yeteng; Pang, Dai-Wen; Dai, Hongjie | Proceedings of the National Academy of Sciences of the United States of America. | 2018 06 26; | 29891702 | |
| Role of 3-Dimensional Architecture of Scar and Surviving Tissue in Ventricular Tachycardia: Insights From High-Resolution Ex Vivo Porcine Models. | Pashakhanloo, Farhad; Herzka, Daniel A; Halperin, Henry; McVeigh, Elliot R; Trayanova, Natalia A | Circulation. Arrhythmia and electrophysiology. | ; | 29880529 | |
| A disconnect between precursor frequency, expansion potential, and site-specific CD4+ T cell responses in aged mice. | Deshpande, Neha R; Uhrlaub, Jennifer L; Way, Sing Sing; Nikolich-?ugich, Janko; Kuhns, Michael S | PloS one. | 2018; | 29864157 | |
| Light sheet theta microscopy for rapid high-resolution imaging of large biological samples. | Migliori, Bianca; Datta, Malika S; Dupre, Christophe; Apak, Mehmet C; Asano, Shoh; Gao, Ruixuan; Boyden, Edward S; Hermanson, Ola; Yuste, Rafael; Tomer, Raju | BMC biology. | 2018 May 29; | 29843722 | |
| Quantifying the uncertainty in model parameters using Gaussian process-based Markov chain Monte Carlo in cardiac electrophysiology. | Dhamala, Jwala; Arevalo, Hermenegild J; Sapp, John; Horácek, B Milan; Wu, Katherine C; Trayanova, Natalia A; Wang, Linwei | Medical image analysis. | ; | 29843078 | |
| Single cell genomics to study DNA and chromosome changes in human gametes and embryos. | Blanshard, Robert C; Chen, Chongyi; Xie, Xiaoliang Sunney; Hoffmann, Eva R | Methods in cell biology. | 2018; | 29804682 | |
| A Near-Complete Spatial Map of Olfactory Receptors in the Mouse Main Olfactory Epithelium. | Tan, Longzhi; Xie, Xiaoliang Sunney | Chemical senses. | 2018 Jul 05; | 29796642 | |
| Multiplex assessment of protein variant abundance by massively parallel sequencing. | Matreyek, Kenneth A; Starita, Lea M; Stephany, Jason J; Martin, Beth; Chiasson, Melissa A; Gray, Vanessa E; Kircher, Martin; Khechaduri, Arineh; Dines, Jennifer N; Hause, Ronald J; Bhatia, Smita; Evans, William E; Relling, Mary V; Yang, Wenjian; Shendure, | Nature genetics. | 2018 Jun; | 29785012 | |
| Mycobacterium tuberculosis-specific CD4+ and CD8+ T cells differ in their capacity to recognize infected macrophages. | Yang, Jason D; Mott, Daniel; Sutiwisesak, Rujapak; Lu, Yu-Jung; Raso, Fiona; Stowell, Britni; Babunovic, Greg Hunter; Lee, Jinhee; Carpenter, Steve M; Way, Sing Sing; Fortune, Sarah M; Behar, Samuel M | PLoS pathogens. | 2018 02; | 29782535 | |
| Single-step Precision Genome Editing in Yeast Using CRISPR-Cas9. | Akhmetov, Azat; Laurent, Jon M; Gollihar, Jimmy; Gardner, Elizabeth C; Garge, Riddhiman K; Ellington, Andrew D; Kachroo, Aashiq H; Marcotte, Edward M | Bio-protocol. | ; | 29770349 | |
| Role of inhibitory control in modulating focal seizure spread. | Liou, Jyun-You; Ma, Hongtao; Wenzel, Michael; Zhao, Mingrui; Baird-Daniel, Eliza; Smith, Elliot H; Daniel, Andy; Emerson, Ronald; Yuste, Rafael; Schwartz, Theodore H; Schevon, Catherine A | Brain : a journal of neurology. | 2018 Jul 01; | 29757347 | |
| A Post-Transcriptional Feedback Mechanism for Noise Suppression and Fate Stabilization. | Hansen, Maike M K; Wen, Winnie Y; Ingerman, Elena; Razooky, Brandon S; Thompson, Cassandra E; Dar, Roy D; Chin, Charles W; Simpson, Michael L; Weinberger, Leor S | Cell. | 2018 Jun 14; | 29754821 | |
| Fueling thought: Management of glycolysis and oxidative phosphorylation in neuronal metabolism. | Yellen, Gary | The Journal of cell biology. | 2018 Jul 02; | 29752396 | |
| Cardiac Optogenetics: 2018. | Boyle, Patrick M; Karathanos, Thomas V; Trayanova, Natalia A | JACC. Clinical electrophysiology. | 2018 Feb; | 29749932 | |
| A Brain-wide Circuit Model of Heat-Evoked Swimming Behavior in Larval Zebrafish. | Haesemeyer, Martin; Robson, Drew N; Li, Jennifer M; Schier, Alexander F; Engert, Florian | Neuron. | 2018 May 16; | 29731253 | |
| Metabolomics and Isotope Tracing. | Jang, Cholsoon; Chen, Li; Rabinowitz, Joshua D | Cell. | 2018 May 03; | 29727671 | |
| Microbial Genetic Composition Tunes Host Longevity. | Han, Bing; Sivaramakrishnan, Priya; Lin, Chih-Chun J; Neve, Isaiah A A; He, Jingquan; Tay, Li Wei Rachel; Sowa, Jessica N; Sizovs, Antons; Du, Guangwei; Wang, Jin; Herman, Christophe; Wang, Meng C | Cell. | 2018 May 03; | 29727664 | |
| Widespread intronic polyadenylation diversifies immune cell transcriptomes. | Singh, Irtisha; Lee, Shih-Han; Sperling, Adam S; Samur, Mehmet K; Tai, Yu-Tzu; Fulciniti, Mariateresa; Munshi, Nikhil C; Mayr, Christine; Leslie, Christina S | Nature communications. | 2018 Apr 30; | 29712909 | |
| Stage-specific Effects of Bioactive Lipids on Human iPSC Cardiac Differentiation and Cardiomyocyte Proliferation. | Scientific reports. | 2018 Apr 26; | 29700394 | ||
| Field-deployable viral diagnostics using CRISPR-Cas13. | Myhrvold, Cameron; Freije, Catherine A; Gootenberg, Jonathan S; Abudayyeh, Omar O; Metsky, Hayden C; Durbin, Ann F; Kellner, Max J; Tan, Amanda L; Paul, Lauren M; Parham, Leda A; Garcia, Kimberly F; Barnes, Kayla G; Chak, Bridget; Mondini, Adriano; Noguei | Science (New York, N.Y.). | 2018 04 27; | 29700266 | |
| Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis. | Science (New York, N.Y.). | 2018 06 01; | 29700225 | ||
| Cryo-EM structure of the gasdermin A3 membrane pore. | Nature. | 2018 May; | 29695864 | ||
| Bridging barriers: a comparative look at the blood-brain barrier across organisms. | O'Brown, Natasha M; Pfau, Sarah J; Gu, Chenghua | Genes & development. | 2018 04 01; | 29692355 | |
| Quantitative Analysis of NAD Synthesis-Breakdown Fluxes. | Liu, Ling; Su, Xiaoyang; Quinn 3rd, William J; Hui, Sheng; Krukenberg, Kristin; Frederick, David W; Redpath, Philip; Zhan, Le; Chellappa, Karthikeyani; White, Eileen; Migaud, Marie; Mitchison, Timothy J; Baur, Joseph A; Rabinowitz, Joshua D | Cell metabolism. | 2018 May 01; | 29685734 | |
| The Structure of the Necrosome RIPK1-RIPK3 Core, a Human Hetero-Amyloid Signaling Complex. | Mompeán, Miguel; Li, Wenbo; Li, Jixi; Laage, Ségolène; Siemer, Ansgar B; Bozkurt, Gunes; Wu, Hao; McDermott, Ann E | Cell. | 2018 May 17; | 29681455 | |
| Developmental and oncogenic programs in H3K27M gliomas dissected by single-cell RNA-seq. | Filbin, Mariella G; Tirosh, Itay; Hovestadt, Volker; Shaw, McKenzie L; Escalante, Leah E; Mathewson, Nathan D; Neftel, Cyril; Frank, Nelli; Pelton, Kristine; Hebert, Christine M; Haberler, Christine; Yizhak, Keren; Gojo, Johannes; Egervari, Kristof; Mount | Science (New York, N.Y.). | 2018 04 20; | 29674595 | |
| Amelioration of Neurosensory Structure and Function in Animal and Cellular Models of a Congenital Blindness. | Song, Ji Yun; Aravand, Puya; Nikonov, Sergei; Leo, Lanfranco; Lyubarsky, Arkady; Bennicelli, Jeannette L; Pan, Jieyan; Wei, Zhangyong; Shpylchak, Ivan; Herrera, Pamela; Bennett, Daniel J; Commins, Nicoletta; Maguire, Albert M; Pham, Jennifer; den Hollande | Molecular therapy : the journal of the American Society of Gene Therapy. | 2018 Mar 21; | 29673930 | |
| Comparative transcriptomics across 14 Drosophila species reveals signatures of longevity. | Ma, Siming; Avanesov, Andrei S; Porter, Emily; Lee, Byung Cheon; Mariotti, Marco; Zemskaya, Nadezhda; Guigo, Roderic; Moskalev, Alexey A; Gladyshev, Vadim N | Aging cell. | 2018 Apr 19; | 29671950 | |
| Holographic imaging and photostimulation of neural activity. | Yang, Weijian; Yuste, Rafael | Current opinion in neurobiology. | 2018 Jun; | 29660600 | |
| Design of a sustainable prepolarizing magnetic resonance imaging system for infant hydrocephalus. | Obungoloch, Johnes; Harper, Joshua R; Consevage, Steven; Savukov, Igor M; Neuberger, Thomas; Tadigadapa, Srinivas; Schiff, Steven J | Magma (New York, N.Y.). | 2018 Apr 11; | 29644479 | |
| Recent progress in photoacoustic molecular imaging. | Yao, Junjie; Wang, Lihong V | Current opinion in chemical biology. | 2018 Apr 06; | 29631120 | |
| Mechanisms of cancer resistance in long-lived mammals. | Seluanov, Andrei; Gladyshev, Vadim N; Vijg, Jan; Gorbunova, Vera | Nature reviews. Cancer. | 2018 Apr 05; | 29622806 | |
| An Optical Neuron-Astrocyte Proximity Assay at Synaptic Distance Scales. | Octeau, J Christopher; Chai, Hua; Jiang, Ruotian; Bonanno, Shivan L; Martin, Kelsey C; Khakh, Baljit S | Neuron. | 2018 Apr 04; | 29621490 | |
| Complete biosynthesis of noscapine and halogenated alkaloids in yeast. | Li, Yanran; Li, Sijin; Thodey, Kate; Trenchard, Isis; Cravens, Aaron; Smolke, Christina D | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Apr 24; | 29610307 | |
| Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain. | Raj, Bushra; Wagner, Daniel E; McKenna, Aaron; Pandey, Shristi; Klein, Allon M; Shendure, Jay; Gagnon, James A; Schier, Alexander F | Nature biotechnology. | 2018 Jun; | 29608178 | |
| Interbrain cortical synchronization encodes multiple aspects of social interactions in monkey pairs. | Tseng, Po-He; Rajangam, Sankaranarayani; Lehew, Gary; Lebedev, Mikhail A; Nicolelis, Miguel A L | Scientific reports. | 2018 Mar 29; | 29599529 | |
| Fates Aligned: Origins and Mechanisms of Ventricular Conduction System and Ventricular Wall Development. | Goodyer, William R; Wu, Sean M | Pediatric cardiology. | 2018 Mar 28; | 29594502 | |
| Anti-CTLA-4 therapy requires an Fc domain for efficacy. | Ingram, Jessica R; Blomberg, Olga S; Rashidian, Mohammad; Ali, Lestat; Garforth, Scott; Fedorov, Elena; Fedorov, Alexander A; Bonanno, Jeffrey B; Le Gall, Camille; Crowley, Stephanie; Espinosa, Camilo; Biary, Tamara; Keliher, Edmund J; Weissleder, Ralph; | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Apr 10; | 29581255 | |
| Reactivation of the Nkx2.5 cardiac enhancer after myocardial infarction does not presage myogenesis. | Deutsch, Marcus-André; Doppler, Stefanie A; Li, Xinghai; Lahm, Harald; Santamaria, Gianluca; Cuda, Giovanni; Eichhorn, Stefan; Ratschiller, Thomas; Dzilic, Elda; Dreßen, Martina; Eckart, Annekathrin; Stark, Konstantin; Massberg, Steffen; Bartels, Anna; Ri | Cardiovascular research. | 2018 Mar 20; | 29579159 | |
| Sirtuin activators and inhibitors: Promises, achievements, and challenges. | Dai, Han; Sinclair, David A; Ellis, James L; Steegborn, Clemens | Pharmacology & therapeutics. | 2018 Mar 22; | 29577959 | |
| Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq. | Pandey, Shristi; Shekhar, Karthik; Regev, Aviv; Schier, Alexander F | Current biology : CB. | 2018 Apr 02; | 29576475 | |
| Global remodeling of the mouse DNA methylome during aging and in response to calorie restriction. | Sziráki, András; Tyshkovskiy, Alexander; Gladyshev, Vadim N | Aging cell. | 2018 Mar 25; | 29575528 | |
| The African turquoise killifish: A research organism to study vertebrate aging and diapause. | Hu, Chi-Kuo; Brunet, Anne | Aging cell. | 2018 Jun; | 29573324 | |
| Impairment of an Endothelial NAD+-H2S Signaling Network Is a Reversible Cause of Vascular Aging. | Das, Abhirup; Huang, George X; Bonkowski, Michael S; Longchamp, Alban; Li, Catherine; Schultz, Michael B; Kim, Lynn-Jee; Osborne, Brenna; Joshi, Sanket; Lu, Yuancheng; Treviño-Villarreal, Jose Humberto; Kang, Myung-Jin; Hung, Tzong-Tyng; Lee, Brendan; Wil | Cell. | 2018 Mar 22; | 29570999 | |
| Amino Acid Restriction Triggers Angiogenesis via GCN2/ATF4 Regulation of VEGF and H2S Production. | Longchamp, Alban; Mirabella, Teodelinda; Arduini, Alessandro; MacArthur, Michael R; Das, Abhirup; Treviño-Villarreal, J Humberto; Hine, Christopher; Ben-Sahra, Issam; Knudsen, Nelson H; Brace, Lear E; Reynolds, Justin; Mejia, Pedro; Tao, Ming; Sharma, Gau | Cell. | 2018 Mar 22; | 29570992 | |
| Economic burden of neonatal sepsis in sub-Saharan Africa. | Ranjeva, Sylvia L; Warf, Benjamin C; Schiff, Steven J | BMJ global health. | 2018; | 29564153 | |
| A bright organic NIR-II nanofluorophore for three-dimensional imaging into biological tissues. | Wan, Hao; Yue, Jingying; Zhu, Shoujun; Uno, Takaaki; Zhang, Xiaodong; Yang, Qinglai; Yu, Kuai; Hong, Guosong; Wang, Junying; Li, Lulin; Ma, Zhuoran; Gao, Hongpeng; Zhong, Yeteng; Su, Jessica; Antaris, Alexander L; Xia, Yan; Luo, Jian; Liang, Yongye; Dai, Hongjie | Nature communications. | 2018 Mar 21; | 29563581 | |
| A deep neural network to assess spontaneous pain from mouse facial expressions. | Tuttle, Alexander H; Molinaro, Mark J; Jethwa, Jasmine F; Sotocinal, Susana G; Prieto, Juan C; Styner, Martin A; Mogil, Jeffrey S; Zylka, Mark J | Molecular pain. | 2018 Jan-Dec; | 29546805 | |
| Personalized Imaging and Modeling Strategies for Arrhythmia Prevention and Therapy. | Trayanova, Natalia A; Boyle, Patrick M; Nikolov, Plamen P | Current opinion in biomedical engineering. | 2018 Mar; | 29546250 | |
| The cis-regulatory dynamics of embryonic development at single-cell resolution. | Cusanovich, Darren A; Reddington, James P; Garfield, David A; Daza, Riza M; Aghamirzaie, Delasa; Marco-Ferreres, Raquel; Pliner, Hannah A; Christiansen, Lena; Qiu, Xiaojie; Steemers, Frank J; Trapnell, Cole; Shendure, Jay; Furlong, Eileen E M | Nature. | 2018 Mar 22; | 29539636 | |
| The Biosynthesis of Lipooligosaccharide from Bacteroides thetaiotaomicron. | Jacobson, Amy N; Choudhury, Biswa P; Fischbach, Michael A | mBio. | 2018 Mar 13; | 29535205 | |
| Immunology of Uterine and Vaginal Mucosae: (Trends in Immunology 39, 302-314, 2018). | Zhou, Jordan Z; Way, Sing Sing; Chen, Kang | Trends in immunology. | 2018 Apr; | 29530651 | |
| Tissue-like Neural Probes for Understanding and Modulating the Brain. | Hong, Guosong; Viveros, Robert D; Zwang, Theodore J; Yang, Xiao; Lieber, Charles M | Biochemistry. | 2018 Mar 19; | 29529359 | |
| Zinc transporters belonging to the Cation Diffusion Facilitator (CDF) family have complementary roles in transporting zinc out of the cytosol. | Choi, Sangyong; Hu, Ya-Mei; Corkins, Mark E; Palmer, Amy E; Bird, Amanda J | PLoS genetics. | 2018 03; | 29529046 | |
| How to Build a Bacterial Cell: MreB as the Foreman of E. coli Construction. | Shi, Handuo; Bratton, Benjamin P; Gitai, Zemer; Huang, Kerwyn Casey | Cell. | 2018 Mar 08; | 29522748 | |
| Nicotinamide Improves Aspects of Healthspan, but Not Lifespan, in Mice. | Mitchell, Sarah J; Bernier, Michel; Aon, Miguel A; Cortassa, Sonia; Kim, Eun Young; Fang, Evandro F; Palacios, Hector H; Ali, Ahmed; Navas-Enamorado, Ignacio; Di Francesco, Andrea; Kaiser, Tamzin A; Waltz, Tyler B; Zhang, Ning; Ellis, James L; Elliott, Pe | Cell metabolism. | 2018 Mar 06; | 29514072 | |
| Therapeutic Potential of NAD-Boosting Molecules: The In Vivo Evidence. | Rajman, Luis; Chwalek, Karolina; Sinclair, David A | Cell metabolism. | 2018 Mar 06; | 29514064 | |
| Toward a universal decoder of linguistic meaning from brain activation. | Pereira, Francisco; Lou, Bin; Pritchett, Brianna; Ritter, Samuel; Gershman, Samuel J; Kanwisher, Nancy; Botvinick, Matthew; Fedorenko, Evelina | Nature communications. | 2018 03 06; | 29511192 | |
| Neuronal regulation of longevity by staying cool. | Lin, Chih-Chun J; Neve, Isaiah A A; Wang, Meng C | Genes & development. | ; | 29491133 | |
| A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters. | Piatkevich, Kiryl D; Jung, Erica E; Straub, Christoph; Linghu, Changyang; Park, Demian; Suk, Ho-Jun; Hochbaum, Daniel R; Goodwin, Daniel; Pnevmatikakis, Eftychios; Pak, Nikita; Kawashima, Takashi; Yang, Chao-Tsung; Rhoades, Jeffrey L; Shemesh, Or; Asano, Shoh; Yoon, Young-Gyu; Freifeld, Limor; Saulnier, Jessica L; Riegler, Clemens; Engert, Florian; Hughes, Thom; Drobizhev, Mikhail; Szabo, Balint; Ahrens, Misha B; Flavell, Steven W; Sabatini, Bernardo L; Boyden, Edward S | Nature chemical biology. | 2018 Apr; | 29483642 | |
| Relationship Between Fibrosis Detected on Late Gadolinium-Enhanced Cardiac Magnetic Resonance and Re-Entrant Activity Assessed With Electrocardiographic Imaging in Human Persistent Atrial Fibrillation. | Cochet, Hubert; Dubois, Rémi; Yamashita, Seigo; Al Jefairi, Nora; Berte, Benjamin; Sellal, Jean-Marc; Hooks, Darren; Frontera, Antonio; Amraoui, Sana; Zemoura, Adlane; Denis, Arnaud; Derval, Nicolas; Sacher, Frederic; Corneloup, Olivier; Latrabe, Valérie; Clément-Guinaudeau, Stéphanie; Relan, Jatin; Zahid, Sohail; Boyle, Patrick M; Trayanova, Natalia A; Bernus, Olivier; Montaudon, Michel; Laurent, François; Hocini, Mélèze; Haïssaguerre, Michel; Jaïs, Pierre | JACC. Clinical electrophysiology. | 2018 Jan; | 29479568 | |
| Changes in Ugandan Climate Rainfall at the Village and Forest Level. | Ssentongo, Paddy; Muwanguzi, Abraham J B; Eden, Uri; Sauer, Timothy; Bwanga, George; Kateregga, Geoffrey; Aribo, Lawrence; Ojara, Moses; Mugerwa, Wilberforce Kisamba; Schiff, Steven J | Scientific reports. | 2018 Feb 23; | 29476058 | |
| Unique Molecular Regulation of Higher-Order Prefrontal Cortical Circuits: Insights into the Neurobiology of Schizophrenia. | Datta, Dibyadeep; Arnsten, Amy F T | ACS chemical neuroscience. | 2018 Mar 01; | 29470055 | |
| Modifications and functional genomics of human transfer RNA. | Pan, Tao | Cell research. | 2018 Apr; | 29463900 | |
| OligoMiner provides a rapid, flexible environment for the design of genome-scale oligonucleotide in situ hybridization probes. | Beliveau, Brian J; Kishi, Jocelyn Y; Nir, Guy; Sasaki, Hiroshi M; Saka, Sinem K; Nguyen, Son C; Wu, Chao-Ting; Yin, Peng | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Mar 06; | 29463736 | |
| QFMatch: multidimensional flow and mass cytometry samples alignment. | Orlova, Darya Y; Meehan, Stephen; Parks, David; Moore, Wayne A; Meehan, Connor; Zhao, Qian; Ghosn, Eliver E B; Herzenberg, Leonore A; Walther, Guenther | Scientific reports. | 2018 Feb 19; | 29459702 | |
| On the design of CRISPR-based single-cell molecular screens. | Hill, Andrew J; McFaline-Figueroa, José L; Starita, Lea M; Gasperini, Molly J; Matreyek, Kenneth A; Packer, Jonathan; Jackson, Dana; Shendure, Jay; Trapnell, Cole | Nature methods. | 2018 Apr; | 29457792 | |
| Multiplexed and portable nucleic acid detection platform with Cas13, Cas12a, and Csm6. | Gootenberg, Jonathan S; Abudayyeh, Omar O; Kellner, Max J; Joung, Julia; Collins, James J; Zhang, Feng | Science (New York, N.Y.). | ; | 29449508 | |
| 3D NIR-II Molecular Imaging Distinguishes Targeted Organs with High-Performance NIR-II Bioconjugates. | Zhu, Shoujun; Herraiz, Sonia; Yue, Jingying; Zhang, Mingxi; Wan, Hao; Yang, Qinglai; Ma, Zhuoran; Wang, Yan; He, Jiahuan; Antaris, Alexander L; Zhong, Yeteng; Diao, Shuo; Feng, Yi; Zhou, Ying; Yu, Kuai; Hong, Guosong; Liang, Yongye; Hsueh, Aaron J; Dai, Hongjie | Advanced materials (Deerfield Beach, Fla.). | 2018 Mar; | 29446156 | |
| A spatial gradient of bacterial diversity in the human oral cavity shaped by salivary flow. | Proctor, Diana M; Fukuyama, Julia A; Loomer, Peter M; Armitage, Gary C; Lee, Stacey A; Davis, Nicole M; Ryder, Mark I; Holmes, Susan P; Relman, David A | Nature communications. | ; | 29445174 | |
| Label-free cell nuclear imaging by Grüneisen relaxation photoacoustic microscopy. | Liu, Xiaowei; Wong, Terence T W; Shi, Junhui; Ma, Jun; Yang, Qing; Wang, Lihong V | Optics letters. | 2018 Feb 15; | 29444034 | |
| Efficient derivation of stable primed pluripotent embryonic stem cells from bovine blastocysts. | Bogliotti, Yanina Soledad; Wu, Jun; Vilarino, Marcela; Okamura, Daiji; Soto, Delia Alba; Zhong, Cuiqing; Sakurai, Masahiro; Sampaio, Rafael Vilar; Suzuki, Keiichiro; Izpisua Belmonte, Juan Carlos; Ross, Pablo Juan | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Feb 27; | 29440377 | |
| Naked mole rats can undergo developmental, oncogene-induced and DNA damage-induced cellular senescence. | Zhao, Yang; Tyshkovskiy, Alexander; Muñoz-Espín, Daniel; Tian, Xiao; Serrano, Manuel; de Magalhaes, Joao Pedro; Nevo, Eviatar; Gladyshev, Vadim N; Seluanov, Andrei; Gorbunova, Vera | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Feb 20; | 29432174 | |
| Mechanism of ubiquitin transfer promoted by TRAF6. | Fu, Tian-Min; Shen, Chen; Li, Qiubai; Zhang, Pengfei; Wu, Hao | Proceedings of the National Academy of Sciences of the United States of America. | 2018 02 20; | 29432170 | |
| Survival analysis with functions of mismeasured covariate histories: the case of chronic air pollution exposure in relation to mortality in the nurses' health study. | Liao, Xiaomei; Zhou, Xin; Wang, Molin; Hart, Jaime E; Laden, Francine; Spiegelman, Donna | Journal of the Royal Statistical Society. Series C, Applied statistics. | 2018 Feb; | 29430064 | |
| Perinatal high fat diet and early life methyl donor supplementation alter one carbon metabolism and DNA methylation in the brain. | McKee, Sarah E; Zhang, Sisi; Chen, Li; Rabinowitz, Joshua D; Reyes, Teresa M | Journal of neurochemistry. | ; | 29423909 | |
| The Small Intestine Converts Dietary Fructose into Glucose and Organic Acids. | Jang, Cholsoon; Hui, Sheng; Lu, Wenyun; Cowan, Alexis J; Morscher, Raphael J; Lee, Gina; Liu, Wei; Tesz, Gregory J; Birnbaum, Morris J; Rabinowitz, Joshua D | Cell metabolism. | 2018 Feb 06; | 29414685 | |
| Emotion fingerprints or emotion populations? A meta-analytic investigation of autonomic features of emotion categories. | Siegel, Erika H; Sands, Molly K; Van den Noortgate, Wim; Condon, Paul; Chang, Yale; Dy, Jennifer; Quigley, Karen S; Barrett, Lisa Feldman | Psychological bulletin. | 2018 Apr; | 29389177 | |
| Assembly mechanism of the CARMA1-BCL10-MALT1-TRAF6 signalosome. | David, Liron; Li, Yang; Ma, Jun; Garner, Ethan; Zhang, Xinzheng; Wu, Hao | Proceedings of the National Academy of Sciences of the United States of America. | 2018 02 13; | 29382759 | |
| Contextual control of skin immunity and inflammation by Corynebacterium. | Ridaura, Vanessa K; Bouladoux, Nicolas; Claesen, Jan; Chen, Y Erin; Byrd, Allyson L; Constantinides, Michael G; Merrill, Eric D; Tamoutounour, Samira; Fischbach, Michael A; Belkaid, Yasmine | The Journal of experimental medicine. | 2018 Mar 05; | 29382696 | |
| Mesh Nanoelectronics: Seamless Integration of Electronics with Tissues. | Dai, Xiaochuan; Hong, Guosong; Gao, Teng; Lieber, Charles M | Accounts of chemical research. | 2018 Feb 20; | 29381054 | |
| A statistical model for improved membrane protein expression using sequence-derived features. | Saladi, Shyam M; Javed, Nauman; Müller, Axel; Clemons Jr., William M | The Journal of biological chemistry. | 2018 Mar 30; | 29378850 | |
| Genome Mining and Assembly-Line Biosynthesis of the UCS1025A Pyrrolizidinone Family of Fungal Alkaloids. | Li, Li; Tang, Man-Cheng; Tang, Shoubin; Gao, Shushan; Soliman, Sameh; Hang, Leibniz; Xu, Wei; Ye, Tao; Watanabe, Kenji; Tang, Yi | Journal of the American Chemical Society. | 2018 Feb 14; | 29373009 | |
| Mitochondrial translation requires folate-dependent tRNA methylation. | Morscher, Raphael J; Ducker, Gregory S; Li, Sophia Hsin-Jung; Mayer, Johannes A; Gitai, Zemer; Sperl, Wolfgang; Rabinowitz, Joshua D | Nature. | 2018 Feb 01; | 29364879 | |
| Skin microbiota-host interactions. | Chen, Y Erin; Fischbach, Michael A; Belkaid, Yasmine | Nature. | 2018 01 24; | 29364286 | |
| Core Differences in Synaptic Signaling Between Primary Visual and Dorsolateral Prefrontal Cortex. | Yang, Sheng-Tao; Wang, Min; Paspalas, Constantinos D; Crimins, Johanna L; Altman, Marcus T; Mazer, James A; Arnsten, Amy F T | Cerebral cortex (New York, N.Y. : 1991). | 2018 Apr 01; | 29351585 | |
| Brain activity patterns in high-throughput electrophysiology screen predict both drug efficacies and side effects. | Eimon, Peter M; Ghannad-Rezaie, Mostafa; De Rienzo, Gianluca; Allalou, Amin; Wu, Yuelong; Gao, Mu; Roy, Ambrish; Skolnick, Jeffrey; Yanik, Mehmet Fatih | Nature communications. | ; | 29335539 | |
| The effect of risk factor misclassification on the partial population attributable risk. | Wong, Benedict H W; Peskoe, Sarah B; Spiegelman, Donna | Statistics in medicine. | 2018 Apr 15; | 29333614 | |
| Single-impulse Panoramic Photoacoustic Computed Tomography of Small-animal Whole-body Dynamics at High Spatiotemporal Resolution. | Li, Lei; Zhu, Liren; Ma, Cheng; Lin, Li; Yao, Junjie; Wang, Lidai; Maslov, Konstantin; Zhang, Ruiying; Chen, Wanyi; Shi, Junhui; Wang, Lihong V | Nature biomedical engineering. | 2017; | 29333331 | |
| Using Genome Sequence to Enable the Design of Medicines and Chemical Probes. | Angelbello, Alicia J; Chen, Jonathan L; Childs-Disney, Jessica L; Zhang, Peiyuan; Wang, Zi-Fu; Disney, Matthew D | Chemical reviews. | 2018 Feb 28; | 29322778 | |
| Time-reversed ultrasonically encoded optical focusing through highly scattering ex vivo human cataractous lenses. | Liu, Yan; Shen, Yuecheng; Ruan, Haowen; Brodie, Frank L; Wong, Terence T W; Yang, Changhuei; Wang, Lihong V | Journal of biomedical optics. | 2018 Jan; | 29322749 | |
| Challenges and Opportunities for Small-Molecule Fluorescent Probes in Redox Biology Applications. | Jiang, Xiqian; Wang, Lingfei; Carroll, Shaina L; Chen, Jianwei; Wang, Meng C; Wang, Jin | Antioxidants & redox signaling. | 2018 Aug 20; | 29320869 | |
| Integration of Plasticity Mechanisms within a Single Sensory Neuron of C. elegans Actuates a Memory. | Hawk, Josh D; Calvo, Ana C; Liu, Ping; Almoril-Porras, Agustin; Aljobeh, Ahmad; Torruella-Suárez, María Luisa; Ren, Ivy; Cook, Nathan; Greenwood, Joel; Luo, Linjiao; Wang, Zhao-Wen; Samuel, Aravinthan D T; Colón-Ramos, Daniel A | Neuron. | 2018 Jan 17; | 29307713 | |
| Incomplete prophage tolerance by type III-A CRISPR-Cas systems reduces the fitness of lysogenic hosts. | Goldberg, Gregory W; McMillan, Elizabeth A; Varble, Andrew; Modell, Joshua W; Samai, Poulami; Jiang, Wenyan; Marraffini, Luciano A | Nature communications. | 2018 01 04; | 29302058 | |
| Rlim-Dependent and -Independent Pathways for X Chromosome Inactivation in Female ESCs. | Wang, Feng; McCannell, Kurtis N; Bo?kovi?, Ana; Zhu, Xiaochun; Shin, JongDae; Yu, Jun; Gallant, Judith; Byron, Meg; Lawrence, Jeanne B; Zhu, Lihua J; Jones, Stephen N; Rando, Oliver J; Fazzio, Thomas G; Bach, Ingolf | Cell reports. | 2017 Dec 26; | 29281819 | |
| Evidence for Long-Timescale Patterns of Synaptic Inputs in CA1 of Awake Behaving Mice. | Kolb, Ilya; Talei Franzesi, Giovanni; Wang, Michael; Kodandaramaiah, Suhasa B; Forest, Craig R; Boyden, Edward S; Singer, Annabelle C | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2018 Feb 14; | 29279309 | |
| The Emergence and Collapse of Knowledge Boundaries. | Broniatowski, David A; Magee, Christopher L | IEEE transactions on engineering management. | 2017 Aug; | 29255326 | |
| Orthologous CRISPR-Cas9 enzymes for combinatorial genetic screens. | Najm, Fadi J; Strand, Christine; Donovan, Katherine F; Hegde, Mudra; Sanson, Kendall R; Vaimberg, Emma W; Sullender, Meagan E; Hartenian, Ella; Kalani, Zohra; Fusi, Nicolo; Listgarten, Jennifer; Younger, Scott T; Bernstein, Bradley E; Root, David E; Doench, John G | Nature biotechnology. | 2017 Dec 18; | 29251726 | |
| High-speed single-shot optical focusing through dynamic scattering media with full-phase wavefront shaping. | Hemphill, Ashton S; Shen, Yuecheng; Liu, Yan; Wang, Lihong V | Applied physics letters. | 2017 Nov 27; | 29249832 | |
| Regulation of regeneration by Heparan Sulfate Proteoglycans in the Extracellular Matrix. | Gardiner, David M | Regenerative engineering and translational medicine. | 2017 Sep; | 29242821 | |
| The aged rhesus macaque manifests Braak stage III/IV Alzheimer's-like pathology. | Paspalas, Constantinos D; Carlyle, Becky C; Leslie, Shannon; Preuss, Todd M; Crimins, Johanna L; Huttner, Anita J; van Dyck, Christopher H; Rosene, Douglas L; Nairn, Angus C; Arnsten, Amy F T | Alzheimer's & dementia : the journal of the Alzheimer's Association. | 2017 Dec 11; | 29241829 | |
| Akt regulation of glycolysis mediates bioenergetic stability in epithelial cells. | Hung, Yin P; Teragawa, Carolyn; Kosaisawe, Nont; Gillies, Taryn E; Pargett, Michael; Minguet, Marta; Distor, Kevin; Rocha-Gregg, Briana L; Coloff, Jonathan L; Keibler, Mark A; Stephanopoulos, Gregory; Yellen, Gary; Brugge, Joan S; Albeck, John G | eLife. | 2017 Dec 14; | 29239720 | |
| Prevalence estimation when disease status is verified only among test positives: Applications in HIV screening programs. | G Thomas, Emma; B Peskoe, Sarah; Spiegelman, Donna | Statistics in medicine. | 2018 Mar 30; | 29230839 | |
| The Axolotl Limb Regeneration Model as a Discovery Tool for Engineering the Stem Cell Niche. | Seyedhassantehrani, Negar; Otsuka, Takayoshi; Singh, Shambhavi; Gardiner, David M | Current stem cell reports. | 2017 Sep; | 29230380 | |
| Quantitative Missense Variant Effect Prediction Using Large-Scale Mutagenesis Data. | Gray, Vanessa E; Hause, Ronald J; Luebeck, Jens; Shendure, Jay; Fowler, Douglas M | Cell systems. | 2018 Jan 24; | 29226803 | |
| A Bioreactor Method to Generate High-titer, Genetically Stable, Clinical-isolate Human Cytomegalovirus. | Saykally, Victoria R; Rast, Luke I; Sasaki, Jeff; Jung, Seung-Yong; Bolovan-Fritts, Cynthia; Weinberger, Leor S | Bio-protocol. | 2017 Nov 05; | 29226181 | |
| Facilitators and barriers to healthy eating in a worksite cafeteria: a qualitative study from Nepal. | Shrestha, Archana; Pyakurel, Prajjwal; Shrestha, Abha; Gautam, Rabin; Manandhar, Nisha; Rhodes, Elizabeth; Tamrakar, Dipesh; Karmacharya, Biraj Man; Malik, Vasanti; Mattei, Josiemer; Spiegelman, Donna | Heart Asia. | ; | 29225703 | |
| Nodal patterning without Lefty inhibitory feedback is functional but fragile. | Rogers, Katherine W; Lord, Nathan D; Gagnon, James A; Pauli, Andrea; Zimmerman, Steven; Aksel, Deniz C; Reyon, Deepak; Tsai, Shengdar Q; Joung, J Keith; Schier, Alexander F | eLife. | 2017 Dec 07; | 29215332 | |
| Focusing light through scattering media by polarization modulation based generalized digital optical phase conjugation. | Yang, Jiamiao; Shen, Yuecheng; Liu, Yan; Hemphill, Ashton S; Wang, Lihong V | Applied physics letters. | 2017 Nov 13; | 29203931 | |
| Mesh electronics: a new paradigm for tissue-like brain probes. | Hong, Guosong; Yang, Xiao; Zhou, Tao; Lieber, Charles M | Current opinion in neurobiology. | 2017 Dec 01; | 29202327 | |
| Single-Cell Transcriptomic Analysis of Primary and Metastatic Tumor Ecosystems in Head and Neck Cancer. | Puram, Sidharth V; Tirosh, Itay; Parikh, Anuraag S; Patel, Anoop P; Yizhak, Keren; Gillespie, Shawn; Rodman, Christopher; Luo, Christina L; Mroz, Edmund A; Emerick, Kevin S; Deschler, Daniel G; Varvares, Mark A; Mylvaganam, Ravi; Rozenblatt-Rosen, Orit; Rocco, James W; Faquin, William C; Lin, Derrick T; Regev, Aviv; Bernstein, Bradley E | Cell. | 2017 Dec 14; | 29198524 | |
| The Pore-Forming Protein Gasdermin D Regulates Interleukin-1 Secretion from Living Macrophages. | Evavold, Charles L; Ruan, Jianbin; Tan, Yunhao; Xia, Shiyu; Wu, Hao; Kagan, Jonathan C | Immunity. | 2018 Jan 16; | 29195811 | |
| Dietary interventions to prevent and manage diabetes in worksite settings: a meta-analysis. | Shrestha, Archana; Karmacharya, Biraj Man; Khudyakov, Polyna; Weber, Mary Beth; Spiegelman, Donna | Journal of occupational health. | 2018 Jan 25; | 29187673 | |
| A craniofacial-specific monosynaptic circuit enables heightened affective pain. | Rodriguez, Erica; Sakurai, Katsuyasu; Xu, Jennie; Chen, Yong; Toda, Koji; Zhao, Shengli; Han, Bao-Xia; Ryu, David; Yin, Henry; Liedtke, Wolfgang; Wang, Fan | Nature neuroscience. | 2017 Dec; | 29184209 | |
| Temporally precise single-cell-resolution optogenetics. | Shemesh, Or A; Tanese, Dimitrii; Zampini, Valeria; Linghu, Changyang; Piatkevich, Kiryl; Ronzitti, Emiliano; Papagiakoumou, Eirini; Boyden, Edward S; Emiliani, Valentina | Nature neuroscience. | 2017 Dec; | 29184208 | |
| Label-free photoacoustic tomography of whole mouse brain structures ex vivo. | Li, Lei; Xia, Jun; Li, Guo; Garcia-Uribe, Alejandro; Sheng, Qiwei; Anastasio, Mark A; Wang, Lihong V | Neurophotonics. | 2016 Jul; | 29181425 | |
| cGAS drives noncanonical-inflammasome activation in age-related macular degeneration. | Kerur, Nagaraj; Fukuda, Shinichi; Banerjee, Daipayan; Kim, Younghee; Fu, Dongxu; Apicella, Ivana; Varshney, Akhil; Yasuma, Reo; Fowler, Benjamin J; Baghdasaryan, Elmira; Marion, Kenneth M; Huang, Xiwen; Yasuma, Tetsuhiro; Hirano, Yoshio; Serbulea, Vlad; Ambati, Meenakshi; Ambati, Vidya L; Kajiwara, Yuji; Ambati, Kameshwari; Hirahara, Shuichiro; Bastos-Carvalho, Ana; Ogura, Yuichiro; Terasaki, Hiroko; Oshika, Tetsuro; Kim, Kyung Bo; Hinton, David R; Leitinger, Norbert; Cambier, John C; Buxbaum, Joseph D; Kenney, M Cristina; Jazwinski, S Michal; Nagai, Hiroshi; Hara, Isao; West, A Phillip; Fitzgerald, Katherine A; Sadda, SriniVas R; Gelfand, Bradley D; Ambati, Jayakrishna | Nature medicine. | 2018 Jan; | 29176737 | |
| Commensal Fungi Recapitulate the Protective Benefits of Intestinal Bacteria. | Jiang, Tony T; Shao, Tzu-Yu; Ang, W X Gladys; Kinder, Jeremy M; Turner, Lucien H; Pham, Giang; Whitt, Jordan; Alenghat, Theresa; Way, Sing Sing | Cell host & microbe. | 2017 Dec 13; | 29174402 | |
| BAD knockout provides metabolic seizure resistance in a genetic model of epilepsy with sudden unexplained death in epilepsy. | Foley, Jeannine; Burnham, Veronica; Tedoldi, Meghan; Danial, Nika N; Yellen, Gary | Epilepsia. | 2018 Jan; | 29171006 | |
| In vitro AMPylation Assays Using Purified, Recombinant Proteins. | Truttmann, Matthias C; Ploegh, Hidde L | Bio-protocol. | 2017 Jul 20; | 29170749 | |
| A gut bacterial pathway metabolizes aromatic amino acids into nine circulating metabolites. | Dodd, Dylan; Spitzer, Matthew H; Van Treuren, William; Merrill, Bryan D; Hryckowian, Andrew J; Higginbottom, Steven K; Le, Anthony; Cowan, Tina M; Nolan, Garry P; Fischbach, Michael A; Sonnenburg, Justin L | Nature. | 2017 11 30; | 29168502 | |
| Evaluating Public Health Interventions: 7. Let the Subject Matter Choose the Effect Measure: Ratio, Difference, or Something Else Entirely. | Spiegelman, Donna; Khudyakov, Polyna; Wang, Molin; Vanderweele, Tyler J | American journal of public health. | 2018 Jan; | 29161073 | |
| Improving Metabolic Health Through Precision Dietetics in Mice. | Barrington, William T; Wulfridge, Phillip; Wells, Ann E; Rojas, Carolina Mantilla; Howe, Selene Y F; Perry, Amie; Hua, Kunjie; Pellizzon, Michael A; Hansen, Kasper D; Voy, Brynn H; Bennett, Brian J; Pomp, Daniel; Feinberg, Andrew P; Threadgill, David W | Genetics. | 2018 Jan; | 29158425 | |
| Service readiness of health facilities in Bangladesh, Haiti, Kenya, Malawi, Namibia, Nepal, Rwanda, Senegal, Uganda and the United Republic of Tanzania. | Leslie, Hannah H; Spiegelman, Donna; Zhou, Xin; Kruk, Margaret E | Bulletin of the World Health Organization. | ; | 29147054 | |
| Skeletal muscle overexpression of nicotinamide phosphoribosyl transferase in mice coupled with voluntary exercise augments exercise endurance. | Costford, Sheila R; Brouwers, Bram; Hopf, Meghan E; Sparks, Lauren M; Dispagna, Mauro; Gomes, Ana P; Cornnell, Heather H; Petucci, Chris; Phelan, Peter; Xie, Hui; Yi, Fanchao; Walter, Glenn A; Osborne, Timothy F; Sinclair, David A; Mynatt, Randall L; Ayala, Julio E; Gardell, Stephen J; Smith, Steven R | Molecular metabolism. | 2018 Jan; | 29146412 | |
| Preconceptual Zika virus asymptomatic infection protects against secondary prenatal infection. | Turner, Lucien H; Kinder, Jeremy M; Wilburn, Adrienne; D'Mello, Rahul J; Braunlin, Makayla R; Jiang, Tony T; Pham, Giang; Way, Sing Sing | PLoS pathogens. | ; | 29145516 | |
| Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans. | Daugherty, Aaron C; Yeo, Robin W; Buenrostro, Jason D; Greenleaf, William J; Kundaje, Anshul; Brunet, Anne | Genome research. | 2017 Dec; | 29141961 | |
| Nematocytes: Discovery and characterization of a novel anculeate hemocyte in Drosophila falleni and Drosophila phalerata. | Bozler, Julianna; Kacsoh, Balint Z; Bosco, Giovanni | PloS one. | 2017; | 29141015 | |
| Label-free automated three-dimensional imaging of whole organs by microtomy-assisted photoacoustic microscopy. | Wong, Terence T W; Zhang, Ruiying; Zhang, Chi; Hsu, Hsun-Chia; Maslov, Konstantin I; Wang, Lidai; Shi, Junhui; Chen, Ruimin; Shung, K Kirk; Zhou, Qifa; Wang, Lihong V | Nature communications. | 2017 Nov 09; | 29123109 | |
| Nicotinamide mononucleotide (NMN) supplementation ameliorates the impact of maternal obesity in mice: comparison with exercise. | Uddin, Golam Mezbah; Youngson, Neil A; Doyle, Bronte M; Sinclair, David A; Morris, Margaret J | Scientific reports. | 2017 Nov 08; | 29118320 | |
| Feasibility of 3D Reconstruction of Neural Morphology Using Expansion Microscopy and Barcode-Guided Agglomeration. | Yoon, Young-Gyu; Dai, Peilun; Wohlwend, Jeremy; Chang, Jae-Byum; Marblestone, Adam H; Boyden, Edward S | Frontiers in computational neuroscience. | 2017; | 29114215 | |
| Naked Mole Rat Induced Pluripotent Stem Cells and Their Contribution to Interspecific Chimera. | Lee, Sang-Goo; Mikhalchenko, Aleksei E; Yim, Sun Hee; Lobanov, Alexei V; Park, Jin-Kyu; Choi, Kwang-Hwan; Bronson, Roderick T; Lee, Chang-Kyu; Park, Thomas J; Gladyshev, Vadim N | Stem cell reports. | 2017 Nov 14; | 29107591 | |
| Entrainment of Arteriole Vasomotor Fluctuations by Neural Activity Is a Basis of Blood-Oxygenation-Level-Dependent ''Resting-State'' Connectivity. | Mateo, Celine; Knutsen, Per M; Tsai, Philbert S; Shih, Andy Y; Kleinfeld, David | Neuron. | 2017 Nov 15; | 29107517 | |
| Parvalbumin-Positive Interneurons Regulate Neuronal Ensembles in Visual Cortex. | Agetsuma, Masakazu; Hamm, Jordan P; Tao, Kentaro; Fujisawa, Shigeyoshi; Yuste, Rafael | Cerebral cortex (New York, N.Y. : 1991). | 2018 May 01; | 29106504 | |
| Ultrasensitive optical imaging with lanthanide lumiphores. | Cho, Ukrae; Riordan, Daniel P; Ciepla, Paulina; Kocherlakota, Kiranmai S; Chen, James K; Harbury, Pehr B | Nature chemical biology. | 2018 Jan; | 29106397 | |
| Facephenes and rainbows: Causal evidence for functional and anatomical specificity of face and color processing in the human brain. | Schalk, Gerwin; Kapeller, Christoph; Guger, Christoph; Ogawa, Hiroshi; Hiroshima, Satoru; Lafer-Sousa, Rosa; Saygin, Zeynep M; Kamada, Kyousuke; Kanwisher, Nancy | Proceedings of the National Academy of Sciences of the United States of America. | 2017 Nov 14; | 29087337 | |
| Building multidisciplinary research. | Wang, Meng C | Molecular biology of the cell. | ; | 29084905 | |
| A systems level approach to temporal expression dynamics in Drosophila reveals clusters of long term memory genes. | Bozler, Julianna; Kacsoh, Balint Z; Chen, Hao; Theurkauf, William E; Weng, Zhiping; Bosco, Giovanni | PLoS genetics. | 2017 Oct; | 29084214 | |
| Small molecule alteration of RNA sequence in cells and animals. | Guan, Lirui; Luo, Yiling; Ja, William W; Disney, Matthew D | Bioorganic & medicinal chemistry letters. | 2017 Oct 18; | 29079470 | |
| Regulation of reproduction and longevity by nutrient-sensing pathways. | Templeman, Nicole M; Murphy, Coleen T | The Journal of cell biology. | 2018 Jan 02; | 29074705 | |
| Flaxseed Consumption Inhibits Chemically Induced Lung Tumorigenesis and Modulates Expression of Phase II Enzymes and Inflammatory Cytokines in A/J Mice. | Chikara, Shireen; Mamidi, Sujan; Sreedasyam, Avinash; Chittem, Kishore; Pietrofesa, Ralph; Zuppa, Athena; Moorthy, Ganesh; Dyer, Neil; Christofidou-Solomidou, Melpo; Reindl, Katie M | Cancer prevention research (Philadelphia, Pa.). | 2018 Jan; | 29074535 | |
| Perceiving social interactions in the posterior superior temporal sulcus. | Isik, Leyla; Koldewyn, Kami; Beeler, David; Kanwisher, Nancy | Proceedings of the National Academy of Sciences of the United States of America. | 2017 10 24; | 29073111 | |
| RNA editing with CRISPR-Cas13. | Cox, David B T; Gootenberg, Jonathan S; Abudayyeh, Omar O; Franklin, Brian; Kellner, Max J; Joung, Julia; Zhang, Feng | Science (New York, N.Y.). | 2017 11 24; | 29070703 | |
| On the Analysis of Case-Control Studies in Cluster-correlated Data Settings. | Haneuse, Sebastien; Rivera-Rodriguez, Claudia | Epidemiology (Cambridge, Mass.). | 2018 Jan; | 29068840 | |
| Q&A: Cellular near death experiences-what is anastasis? | Sun, Gongping; Montell, Denise J | BMC biology. | 2017 Oct 24; | 29065871 | |
| Expansion Mini-Microscopy: An Enabling Alternative in Point-of-Care Diagnostics. | Zhang, Yu Shrike; Santiago, Grissel Trujillo-de; Alvarez, Mario Moisés; Schiff, Steven J; Boyden, Edward S; Khademhosseini, Ali | Current opinion in biomedical engineering. | 2017 Mar; | 29062977 | |
| Virus-Mediated Genome Editing via Homology-Directed Repair in Mitotic and Postmitotic Cells in Mammalian Brain. | Nishiyama, Jun; Mikuni, Takayasu; Yasuda, Ryohei | Neuron. | 2017 Nov 15; | 29056297 | |
| Pattern-based Search of Epigenomic Data Using GeNemo. | Zheng, Alvin; Cao, Xiaoyi; Zhong, Sheng | Journal of visualized experiments : JoVE. | 2017 10 08; | 29053670 | |
| Whispering-gallery-mode emission from biological luminescent protein microcavity assemblies. | Humar, Matja?; Yun, Seok Hyun | Optica. | 2017; | 29046889 | |
| A B Cell Regulome Links Notch to Downstream Oncogenic Pathways in Small B Cell Lymphomas. | Ryan, Russell J H; Petrovic, Jelena; Rausch, Dylan M; Zhou, Yeqiao; Lareau, Caleb A; Kluk, Michael J; Christie, Amanda L; Lee, Winston Y; Tarjan, Daniel R; Guo, Bingqian; Donohue, Laura K H; Gillespie, Shawn M; Nardi, Valentina; Hochberg, Ephraim P; Blacklow, Stephen C; Weinstock, David M; Faryabi, Robert B; Bernstein, Bradley E; Aster, Jon C; Pear, Warren S | Cell reports. | 2017 Oct 17; | 29045844 | |
| Glucose feeds the TCA cycle via circulating lactate. | Hui, Sheng; Ghergurovich, Jonathan M; Morscher, Raphael J; Jang, Cholsoon; Teng, Xin; Lu, Wenyun; Esparza, Lourdes A; Reya, Tannishtha; Le Zhan; Yanxiang Guo, Jessie; White, Eileen; Rabinowitz, Joshua D | Nature. | 2017 11 02; | 29045397 | |
| Live cell imaging of cytosolic NADH/NAD+ ratio in hepatocytes and liver slices. | Masia, Ricard; McCarty, William J; Lahmann, Carolina; Luther, Jay; Chung, Raymond T; Yarmush, Martin L; Yellen, Gary | American journal of physiology. Gastrointestinal and liver physiology. | 2018 01 01; | 29025729 | |
| High-throughput screens using photo-highlighting discover BMP signaling in mitochondrial lipid oxidation. | Yu, Yong; Mutlu, Ayse Sena; Liu, Harrison; Wang, Meng C | Nature communications. | 2017 10 11; | 29021566 | |
| Overproduction of Neurons Is Correlated with Enhanced Cortical Ensembles and Increased Perceptual Discrimination. | Fang, Wei-Qun; Yuste, Rafael | Cell reports. | 2017 Oct 10; | 29020625 | |
| In vivo programming of endogenous antibodies via oral administration of adaptor ligands. | Nagano, Masanobu; Carrillo, Nancy; Otsubo, Nobumasa; Hakamata, Wataru; Ban, Hitoshi; Fuller, Roberta P; Bashiruddin, Nasir K; Barbas 3rd, Carlos F | Bioorganic & medicinal chemistry. | 2017 11 01; | 28988625 | |
| Solution-phase and solid-phase sequential, selective modification of side chains in KDYWEC and KDYWE as models for usage in single-molecule protein sequencing. | Hernandez, Erik T; Swaminathan, Jagannath; Marcotte, Edward M; Anslyn, Eric V | New journal of chemistry = Nouveau journal de chimie. | 2017 Jan 21; | 28983186 | |
| Do Gametes Woo? Evidence for Their Nonrandom Union at Fertilization. | Nadeau, Joseph H | Genetics. | 2017 Oct; | 28978771 | |
| Slowing Down Aging. | Meyer, Katharina; Yankner, Bruce A | Cell metabolism. | 2017 Oct 03; | 28978424 | |
| RNA targeting with CRISPR-Cas13. | Abudayyeh, Omar O; Gootenberg, Jonathan S; Essletzbichler, Patrick; Han, Shuo; Joung, Julia; Belanto, Joseph J; Verdine, Vanessa; Cox, David B T; Kellner, Max J; Regev, Aviv; Lander, Eric S; Voytas, Daniel F; Ting, Alice Y; Zhang, Feng | Nature. | 2017 Oct 12; | 28976959 | |
| Nkx2.5+?Cardiomyoblasts Contribute to Cardiomyogenesis in the Neonatal Heart. | Serpooshan, Vahid; Liu, Yuan-Hung; Buikema, Jan W; Galdos, Francisco X; Chirikian, Orlando; Paige, Sharon; Venkatraman, Sneha; Kumar, Anusha; Rawnsley, David R; Huang, Xiaojing; Pijnappels, Daniël A; Wu, Sean M | Scientific reports. | 2017 Oct 03; | 28974782 | |
| Motionless volumetric photoacoustic microscopy with spatially invariant resolution. | Yang, Jiamiao; Gong, Lei; Xu, Xiao; Hai, Pengfei; Shen, Yuecheng; Suzuki, Yuta; Wang, Lihong V | Nature communications. | 2017 10 03; | 28974681 | |
| Targeted antigen delivery by an anti-class II MHC VHH elicits focused ?MUC1(Tn) immunity. | Fang, Tao; Van Elssen, Catharina H M J; Duarte, Joao N; Guzman, Jonathan S; Chahal, Jasdave S; Ling, Jingjing; Ploegh, Hidde L | Chemical science. | 2017 Aug 01; | 28970938 | |
| Sensitivity of reentrant driver localization to electrophysiological parameter variability in image-based computational models of persistent atrial fibrillation sustained by a fibrotic substrate. | Deng, Dongdong; Murphy, Michael J; Hakim, Joe B; Franceschi, William H; Zahid, Sohail; Pashakhanloo, Farhad; Trayanova, Natalia A; Boyle, Patrick M | Chaos (Woodbury, N.Y.). | 2017 Sep; | 28964164 | |
| Musings on mechanism: quest for a quark theory of proteins? | Phillips, Rob | FASEB journal : official publication of the Federation of American Societies for Experimental Biology. | 2017 10; | 28963318 | |
| Closed-Loop Real-Time Imaging Enables Fully Automated Cell-Targeted Patch-Clamp Neural Recording In Vivo. | Suk, Ho-Jun; van Welie, Ingrid; Kodandaramaiah, Suhasa B; Allen, Brian; Forest, Craig R; Boyden, Edward S | Neuron. | 2017 Sep 27; | 28957673 | |
| From structure to function, how bioinformatics help to reveal functions of our genomes. | Zheng, Xiaoqi; Zhong, Sheng | Genome biology. | 2017 Sep 26; | 28950915 | |
| Evaluating Efficiencies of Dual AAV Approaches for Retinal Targeting. | Carvalho, Livia S; Turunen, Heikki T; Wassmer, Sarah J; Luna-Velez, María V; Xiao, Ru; Bennett, Jean; Vandenberghe, Luk H | Frontiers in neuroscience. | 2017; | 28943836 | |
| A Single-Chain Photoswitchable CRISPR-Cas9 Architecture for Light-Inducible Gene Editing and Transcription. | Zhou, Xin X; Zou, Xinzhi; Chung, Hokyung K; Gao, Yuchen; Liu, Yanxia; Qi, Lei S; Lin, Michael Z | ACS chemical biology. | 2018 Feb 16; | 28938067 | |
| Toward a conceptual framework for early brain and behavior development in autism. | Piven, J; Elison, J T; Zylka, M J | Molecular psychiatry. | 2017 Oct; | 28937691 | |
| PD-L1 is an activation-independent marker of brown adipocytes. | Ingram, Jessica R; Dougan, Michael; Rashidian, Mohammad; Knoll, Marko; Keliher, Edmund J; Garrett, Sarah; Garforth, Scott; Blomberg, Olga S; Espinosa, Camilo; Bhan, Atul; Almo, Steven C; Weissleder, Ralph; Lodish, Harvey; Dougan, Stephanie K; Ploegh, Hidde L | Nature communications. | 2017 09 21; | 28935898 | |
| Enhanced Nociception in Angelman Syndrome Model Mice. | McCoy, Eric S; Taylor-Blake, Bonnie; Aita, Megumi; Simon, Jeremy M; Philpot, Benjamin D; Zylka, Mark J | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2017 Oct 18; | 28931574 | |
| Estimation and Inference for the Mediation Proportion. | Nevo, Daniel; Liao, Xiaomei; Spiegelman, Donna | The international journal of biostatistics. | 2017 09 20; | 28930628 | |
| In Situ Super-Resolution Imaging of Genomic DNA with OligoSTORM and OligoDNA-PAINT. | Beliveau, Brian J; Boettiger, Alistair N; Nir, Guy; Bintu, Bogdan; Yin, Peng; Zhuang, Xiaowei; Wu, C-Ting | Methods in molecular biology (Clifton, N.J.). | ; | 28924672 | |
| Metabolic crosstalk regulates Porphyromonas gingivalis colonization and virulence during oral polymicrobial infection. | Kuboniwa, Masae; Houser, John R; Hendrickson, Erik L; Wang, Qian; Alghamdi, Samar A; Sakanaka, Akito; Miller, Daniel P; Hutcherson, Justin A; Wang, Tiansong; Beck, David A C; Whiteley, Marvin; Amano, Atsuo; Wang, Huizhi; Marcotte, Edward M; Hackett, Murray; Lamont, Richard J | Nature microbiology. | 2017 Nov; | 28924191 | |
| Tissue Engineering of 3D Organotypic Microtissues by Acoustic Assembly. | Zhu, Yuqing; Serpooshan, Vahid; Wu, Sean; Demirci, Utkan; Chen, Pu; Güven, Sinan | Methods in molecular biology (Clifton, N.J.). | ; | 28921421 | |
| mTOR Inhibition Restores Amino Acid Balance in Cells Dependent on Catabolism of Extracellular Protein. | Nofal, Michel; Zhang, Kevin; Han, Seunghun; Rabinowitz, Joshua D | Molecular cell. | 2017 Sep 21; | 28918901 | |
| Improving membrane protein expression by optimizing integration efficiency. | Niesen, Michiel J M; Marshall, Stephen S; Miller 3rd, Thomas F; Clemons Jr, William M | The Journal of biological chemistry. | 2017 Nov 24; | 28918393 | |
| Selenocysteine tRNA[Ser]Sec, the Central Component of Selenoprotein Biosynthesis: Isolation, Identification, Modification, and Sequencing. | Carlson, Bradley A; Lee, Byeong Jae; Tsuji, Petra A; Copeland, Paul R; Schweizer, Ulrich; Gladyshev, Vadim N; Hatfield, Dolph L | Methods in molecular biology (Clifton, N.J.). | 2018; | 28917036 | |
| Chemical Basis for Deuterium Labeling of Fat and NADPH. | Zhang, Zhaoyue; Chen, Li; Liu, Ling; Su, Xiaoyang; Rabinowitz, Joshua D | Journal of the American Chemical Society. | 2017 Oct 18; | 28911221 | |
| Distinct roles for motor neuron autophagy early and late in the SOD1G93A mouse model of ALS. | Rudnick, Noam D; Griffey, Christopher J; Guarnieri, Paolo; Gerbino, Valeria; Wang, Xueyong; Piersaint, Jason A; Tapia, Juan Carlos; Rich, Mark M; Maniatis, Tom | Proceedings of the National Academy of Sciences of the United States of America. | 2017 Sep 26; | 28904095 | |
| SAM-dependent enzyme-catalysed pericyclic reactions in natural product biosynthesis. | Ohashi, Masao; Liu, Fang; Hai, Yang; Chen, Mengbin; Tang, Man-Cheng; Yang, Zhongyue; Sato, Michio; Watanabe, Kenji; Houk, K N; Tang, Yi | Nature. | 2017 Sep 28; | 28902839 | |
| Machine Learning Analysis Identifies Drosophila Grunge/Atrophin as an Important Learning and Memory Gene Required for Memory Retention and Social Learning. | Kacsoh, Balint Z; Greene, Casey S; Bosco, Giovanni | G3 (Bethesda, Md.). | 2017 Nov 06; | 28889104 | |
| Variant Interpretation: Functional Assays to the Rescue. | Starita, Lea M; Ahituv, Nadav; Dunham, Maitreya J; Kitzman, Jacob O; Roth, Frederick P; Seelig, Georg; Shendure, Jay; Fowler, Douglas M | American journal of human genetics. | 2017 Sep 07; | 28886340 | |
| CRISPR-Cas9 mediated one-step disabling of pancreatogenesis in pigs. | Wu, Jun; Vilarino, Marcela; Suzuki, Keiichiro; Okamura, Daiji; Bogliotti, Yanina Soledad; Park, Insung; Rowe, Joan; McNabb, Bret; Ross, Pablo Juan; Belmonte, Juan Carlos Izpisua | Scientific reports. | 2017 Sep 05; | 28874671 | |
| Localized CD47 blockade enhances immunotherapy for murine melanoma. | Ingram, Jessica R; Blomberg, Olga S; Sockolosky, Jonathan T; Ali, Lestat; Schmidt, Florian I; Pishesha, Novalia; Espinosa, Camilo; Dougan, Stephanie K; Garcia, K Christopher; Ploegh, Hidde L; Dougan, Michael | Proceedings of the National Academy of Sciences of the United States of America. | 2017 Sep 19; | 28874561 | |
| PhenoGraph and viSNE facilitate the identification of abnormal T-cell populations in routine clinical flow cytometric data. | DiGiuseppe, Joseph A; Cardinali, Jolene L; Rezuke, William N; Pe'er, Dana | Cytometry. Part B, Clinical cytometry. | 2017 Sep 02; | 28865188 | |
| Closed-Loop Real-Time Imaging Enables Fully Automated Cell-Targeted Patch-Clamp Neural Recording In Vivo. | Suk, Ho-Jun; van Welie, Ingrid; Kodandaramaiah, Suhasa B; Allen, Brian; Forest, Craig R; Boyden, Edward S | Neuron. | 2017 Aug 30; | 28858614 | |
| GUIDES: sgRNA design for loss-of-function screens. | Meier, Joshua A; Zhang, Feng; Sanjana, Neville E | Nature methods. | 2017 Aug 31; | 28858339 | |
| Regulation by 3'-Untranslated Regions. | Mayr, Christine | Annual review of genetics. | ; | 28853924 | |
| Massively parallel single-nucleus RNA-seq with DroNc-seq. | Habib, Naomi; Avraham-Davidi, Inbal; Basu, Anindita; Burks, Tyler; Shekhar, Karthik; Hofree, Matan; Choudhury, Sourav R; Aguet, François; Gelfand, Ellen; Ardlie, Kristin; Weitz, David A; Rozenblatt-Rosen, Orit; Zhang, Feng; Regev, Aviv | Nature methods. | 2017 Oct; | 28846088 | |
| What is changing when: Decoding visual information in movies from human intracranial recordings. | Isik, Leyla; Singer, Jedediah; Madsen, Joseph R; Kanwisher, Nancy; Kreiman, Gabriel | NeuroImage. | 2017 Aug 18; | 28823828 | |
| Comprehensive single-cell transcriptional profiling of a multicellular organism. | Cao, Junyue; Packer, Jonathan S; Ramani, Vijay; Cusanovich, Darren A; Huynh, Chau; Daza, Riza; Qiu, Xiaojie; Lee, Choli; Furlan, Scott N; Steemers, Frank J; Adey, Andrew; Waterston, Robert H; Trapnell, Cole; Shendure, Jay | Science (New York, N.Y.). | 2017 08 18; | 28818938 | |
| Tissue-Resident Macrophages in Pancreatic Ductal Adenocarcinoma Originate from Embryonic Hematopoiesis and Promote Tumor Progression. | Zhu, Yu; Herndon, John M; Sojka, Dorothy K; Kim, Ki-Wook; Knolhoff, Brett L; Zuo, Chong; Cullinan, Darren R; Luo, Jingqin; Bearden, Audrey R; Lavine, Kory J; Yokoyama, Wayne M; Hawkins, William G; Fields, Ryan C; Randolph, Gwendalyn J; DeNardo, David G | Immunity. | 2017 08 15; | 28813661 | |
| Reversible Reaction-Based Fluorescent Probe for Real-Time Imaging of Glutathione Dynamics in Mitochondria. | Chen, Jianwei; Jiang, Xiqian; Zhang, Chengwei; MacKenzie, Kevin R; Stossi, Fabio; Palzkill, Timothy; Wang, Meng C; Wang, Jin | ACS sensors. | 2017 Sep 22; | 28809477 | |
| AAV-mediated direct in vivo CRISPR screen identifies functional suppressors in glioblastoma. | Chow, Ryan D; Guzman, Christopher D; Wang, Guangchuan; Schmidt, Florian; Youngblood, Mark W; Ye, Lupeng; Errami, Youssef; Dong, Matthew B; Martinez, Michael A; Zhang, Sensen; Renauer, Paul; Bilguvar, Kaya; Gunel, Murat; Sharp, Phillip A; Zhang, Feng; Platt, Randall J; Chen, Sidi | Nature neuroscience. | 2017 Oct; | 28805815 | |
| Sonofragmentation of Ultrathin 1D Nanomaterials. | Gao, Ruixuan; Gupta, Ishan; Boyden, Edward S | Particle & particle systems characterization : measurement and description of particle properties and behavior in powders and other disperse systems. | 2017 Jan; | 28804214 | |
| Distinct Cellular Mechanisms Underlie Anti-CTLA-4 and Anti-PD-1 Checkpoint Blockade. | Wei, Spencer C; Levine, Jacob H; Cogdill, Alexandria P; Zhao, Yang; Anang, Nana-Ama A S; Andrews, Miles C; Sharma, Padmanee; Wang, Jing; Wargo, Jennifer A; Pe'er, Dana; Allison, James P | Cell. | 2017 Sep 07; | 28803728 | |
| Molecular signatures of longevity: Insights from cross-species comparative studies. | Ma, Siming; Gladyshev, Vadim N | Seminars in cell & developmental biology. | 2017 Oct; | 28800931 | |
| Fate-Regulating Circuits in Viruses: From Discovery to New Therapy Targets. | Pai, Anand; Weinberger, Leor S | Annual review of virology. | 2017 Sep 29; | 28800289 | |
| Genome-scale activation screen identifies a lncRNA locus regulating a gene neighbourhood. | Joung, Julia; Engreitz, Jesse M; Konermann, Silvana; Abudayyeh, Omar O; Verdine, Vanessa K; Aguet, Francois; Gootenberg, Jonathan S; Sanjana, Neville E; Wright, Jason B; Fulco, Charles P; Tseng, Yuen-Yi; Yoon, Charles H; Boehm, Jesse S; Lander, Eric S; Zhang, Feng | Nature. | 2017 08 17; | 28792927 | |
| Space- and intensity-constrained reconstruction for compressed ultrafast photography. | Zhu, Liren; Chen, Yujia; Liang, Jinyang; Xu, Qiaofeng; Gao, Liang; Ma, Cheng; Wang, Lihong V | Optica. | 2016 Jul; | 28775997 | |
| A molecular signature for anastasis, recovery from the brink of apoptotic cell death. | Sun, Gongping; Guzman, Elmer; Balasanyan, Varuzhan; Conner, Christopher M; Wong, Kirsten; Zhou, Hongjun Robin; Kosik, Kenneth S; Montell, Denise J | The Journal of cell biology. | 2017 Oct 02; | 28768686 | |
| Neuronal Stimulation Triggers Neuronal Glycolysis and Not Lactate Uptake. | Díaz-García, Carlos Manlio; Mongeon, Rebecca; Lahmann, Carolina; Koveal, Dorothy; Zucker, Hannah; Yellen, Gary | Cell metabolism. | 2017 Aug 01; | 28768175 | |
| Ribosome Rescue Inhibitors Kill Actively Growing and Nonreplicating Persister Mycobacterium tuberculosis Cells. | Alumasa, John N; Manzanillo, Paolo S; Peterson, Nicholas D; Lundrigan, Tricia; Baughn, Anthony D; Cox, Jeffery S; Keiler, Kenneth C | ACS infectious diseases. | 2017 Sep 08; | 28762275 | |
| Implications of human genetic variation in CRISPR-based therapeutic genome editing. | Scott, David A; Zhang, Feng | Nature medicine. | 2017 Sep; | 28759051 | |
| Critical Comparison of FRET-Sensor Functionality in the Cytosol and Endoplasmic Reticulum and Implications for Quantification of Ions. | Carter, Kyle P; Carpenter, Margaret C; Fiedler, Brett; Jimenez, Ralph; Palmer, Amy E | Analytical chemistry. | 2017 Sep 05; | 28758723 | |
| AID Recognizes Structured DNA for Class Switch Recombination. | Qiao, Qi; Wang, Li; Meng, Fei-Long; Hwang, Joyce K; Alt, Frederick W; Wu, Hao | Molecular cell. | 2017 Aug 03; | 28757211 | |
| Expression and Purification of Active Recombinant Human Alpha-1 Antitrypsin (AAT) from Escherichia coli. | Krishnan, Beena; Hedstrom, Lizbeth; Hebert, Daniel N; Gierasch, Lila M; Gershenson, Anne | Methods in molecular biology (Clifton, N.J.). | 2017; | 28752459 | |
| Targeted DNA methylation in human cells using engineered dCas9-methyltransferases. | Xiong, Tina; Meister, Glenna E; Workman, Rachael E; Kato, Nathaniel C; Spellberg, Michael J; Turker, Fulya; Timp, Winston; Ostermeier, Marc; Novina, Carl D | Scientific reports. | 2017 Jul 27; | 28751638 | |
| ChromEMT: Visualizing 3D chromatin structure and compaction in interphase and mitotic cells. | Ou, Horng D; Phan, Sébastien; Deerinck, Thomas J; Thor, Andrea; Ellisman, Mark H; O'Shea, Clodagh C | Science (New York, N.Y.). | 2017 07 28; | 28751582 | |
| Multiview Hilbert transformation in full-ring transducer array-based photoacoustic computed tomography. | Li, Lei; Zhu, Liren; Shen, Yuecheng; Wang, Lihong V | Journal of biomedical optics. | 2017 07 01; | 28745385 | |
| Dynamic structure of locomotor behavior in walking fruit flies. | Katsov, Alexander Y; Freifeld, Limor; Horowitz, Mark; Kuehn, Seppe; Clandinin, Thomas R | eLife. | 2017 07 25; | 28742018 | |
| In Vivo Rescue of the Hematopoietic Niche By Pluripotent Stem Cell Complementation of Defective Osteoblast Compartments. | Chubb, Rhiannon; Oh, James; Riley, Alyssa K; Kimura, Takaharu; Wu, Sean M; Wu, Joy Y | Stem cells (Dayton, Ohio). | 2017 Oct; | 28741855 | |
| Identification of a hybrid myocardial zone in the mammalian heart after birth. | Tian, Xueying; Li, Yan; He, Lingjuan; Zhang, Hui; Huang, Xiuzhen; Liu, Qiaozhen; Pu, Wenjuan; Zhang, Libo; Li, Yi; Zhao, Huan; Wang, Zhifu; Zhu, Jianhong; Nie, Yu; Hu, Shengshou; Sedmera, David; Zhong, Tao P; Yu, Ying; Zhang, Li; Yan, Yan; Qiao, Zengyong; | Nature communications. | ; | 28729659 | |
| Epigenetic plasticity and the hallmarks of cancer. | Flavahan, William A; Gaskell, Elizabeth; Bernstein, Bradley E | Science (New York, N.Y.). | ; | 28729483 | |
| Gene expression signatures of human cell and tissue longevity. | Seim, Inge; Ma, Siming; Gladyshev, Vadim N | NPJ aging and mechanisms of disease. | 2016; | 28721269 | |
| Nanoscale imaging of clinical specimens using pathology-optimized expansion microscopy. | Zhao, Yongxin; Bucur, Octavian; Irshad, Humayun; Chen, Fei; Weins, Astrid; Stancu, Andreea L; Oh, Eun-Young; DiStasio, Marcello; Torous, Vanda; Glass, Benjamin; Stillman, Isaac E; Schnitt, Stuart J; Beck, Andrew H; Boyden, Edward S | Nature biotechnology. | 2017 Aug; | 28714966 | |
| Neural Circuit-Specialized Astrocytes: Transcriptomic, Proteomic, Morphological, and Functional Evidence. | Chai, Hua; Diaz-Castro, Blanca; Shigetomi, Eiji; Monte, Emma; Octeau, J Christopher; Yu, Xinzhu; Cohn, Whitaker; Rajendran, Pradeep S; Vondriska, Thomas M; Whitelegge, Julian P; Coppola, Giovanni; Khakh, Baljit S | Neuron. | 2017 Jul 11; | 28712653 | |
| Efficacy and safety of voretigene neparvovec (AAV2-hRPE65v2) in patients with RPE65-mediated inherited retinal dystrophy: a randomised, controlled, open-label, phase 3 trial. | Russell, Stephen; Bennett, Jean; Wellman, Jennifer A; Chung, Daniel C; Yu, Zi-Fan; Tillman, Amy; Wittes, Janet; Pappas, Julie; Elci, Okan; McCague, Sarah; Cross, Dominique; Marshall, Kathleen A; Walshire, Jean; Kehoe, Taylor L; Reichert, Hannah; Davis, Maria; Raffini, Leslie; George, Lindsey A; Hudson, F Parker; Dingfield, Laura; Zhu, Xiaosong; Haller, Julia A; Sohn, Elliott H; Mahajan, Vinit B; Pfeifer, Wanda; Weckmann, Michelle; Johnson, Chris; Gewaily, Dina; Drack, Arlene; Stone, Edwin; Wachtel, Katie; Simonelli, Francesca; Leroy, Bart P; Wright, J Fraser; High, Katherine A; Maguire, Albert M | Lancet (London, England). | 2017 Aug 26; | 28712537 | |
| CRISPR/Cas9-Mediated Scanning for Regulatory Elements Required for HPRT1 Expression via Thousands of Large, Programmed Genomic Deletions. | Gasperini, Molly; Findlay, Gregory M; McKenna, Aaron; Milbank, Jennifer H; Lee, Choli; Zhang, Melissa D; Cusanovich, Darren A; Shendure, Jay | American journal of human genetics. | 2017 Aug 03; | 28712454 | |
| Translation fidelity coevolves with longevity. | Ke, Zhonghe; Mallik, Pramit; Johnson, Adam B; Luna, Facundo; Nevo, Eviatar; Zhang, Zhengdong D; Gladyshev, Vadim N; Seluanov, Andrei; Gorbunova, Vera | Aging cell. | 2017 Oct; | 28707419 | |
| Quantitative real-time imaging of glutathione. | Jiang, Xiqian; Chen, Jianwei; Baji?, Aleksandar; Zhang, Chengwei; Song, Xianzhou; Carroll, Shaina L; Cai, Zhao-Lin; Tang, Meiling; Xue, Mingshan; Cheng, Ninghui; Schaaf, Christian P; Li, Feng; MacKenzie, Kevin R; Ferreon, Allan Chris M; Xia, Fan; Wang, Me | Nature communications. | 2017 Jul 13; | 28703127 | |
| A novel mechanism for mechanosensory-based rheotaxis in larval zebrafish. | Oteiza, Pablo; Odstrcil, Iris; Lauder, George; Portugues, Ruben; Engert, Florian | Nature. | 2017 07 27; | 28700578 | |
| Novel mobility test to assess functional vision in patients with inherited retinal dystrophies. | Chung, Daniel C; McCague, Sarah; Yu, Zi-Fan; Thill, Satha; DiStefano-Pappas, Julie; Bennett, Jean; Cross, Dominique; Marshall, Kathleen; Wellman, Jennifer; High, Katherine A | Clinical & experimental ophthalmology. | 2017 Jul 11; | 28697537 | |
| Thermoneutrality but not UCP1 Deficiency Suppresses Monocyte Mobilization into Blood. | Williams, Jesse W; Elvington, Andrew F; Ivanov, Stoyan; Kessler, Skyler; Luehmann, Hannah; Baba, Osamu; Saunders, Brian T; Kim, Ki-Wook; Johnson, Michael W; Craft, Clarissa S; Choi, Jae-Hoon; Sorci-Thomas, Mary G; Zinselmeyer, Bernd H; Brestoff, Jonathan | Circulation research. | 2017 Jul 10; | 28696252 | |
| Imaging-Based Simulations for Predicting Sudden Death and Guiding Ventricular Tachycardia Ablation. | Trayanova, Natalia A; Pashakhanloo, Farhad; Wu, Katherine C; Halperin, Henry R | Circulation. Arrhythmia and electrophysiology. | 2017 Jul; | 28696219 | |
| Self-consistent theory of transcriptional control in complex regulatory architectures. | Landman, Jasper; Brewster, Robert C; Weinert, Franz M; Phillips, Rob; Kegel, Willem K | PloS one. | 2017; | 28686609 | |
| Spectral reading of optical resonance-encoded cells in microfluidics. | Humar, Matja?; Upadhya, Avinash; Yun, Seok Hyun | Lab on a chip. | 2017 Aug 08; | 28686280 | |
| Metabolic labeling in middle-down proteomics allows for investigation of the dynamics of the histone code. | Sidoli, Simone; Lu, Congcong; Coradin, Mariel; Wang, Xiaoshi; Karch, Kelly R; Ruminowicz, Chrystian; Garcia, Benjamin A | Epigenetics & chromatin. | 2017 Jul 06; | 28683815 | |
| Reversible Product Release and Recapture by a Fungal Polyketide Synthase Using a Carnitine Acyltransferase Domain. | Hang, Leibniz; Tang, Man-Cheng; Harvey, Colin J B; Page, Claire G; Li, Jian; Hung, Yiu-Sun; Liu, Nicholas; Hillenmeyer, Maureen E; Tang, Yi | Angewandte Chemie (International ed. in English). | 2017 Aug 01; | 28679030 | |
| Sub-Nyquist sampling boosts targeted light transport through opaque scattering media. | Shen, Yuecheng; Liu, Yan; Ma, Cheng; Wang, Lihong V | Optica. | 2017 Jan 20; | 28670607 | |
| Predicting the response to CTLA-4 blockade by longitudinal noninvasive monitoring of CD8 T cells. | Rashidian, Mohammad; Ingram, Jessica R; Dougan, Michael; Dongre, Anushka; Whang, Katherine A; LeGall, Camille; Cragnolini, Juan J; Bierie, Brian; Gostissa, Monica; Gorman, James; Grotenbreg, Gijsbert M; Bhan, Atul; Weinberg, Robert A; Ploegh, Hidde L | The Journal of experimental medicine. | 2017 Aug 07; | 28666979 | |
| Systematic bacterialization of yeast genes identifies a near-universally swappable pathway. | Kachroo, Aashiq H; Laurent, Jon M; Akhmetov, Azat; Szilagyi-Jones, Madelyn; McWhite, Claire D; Zhao, Alice; Marcotte, Edward M | eLife. | 2017 Jun 29; | 28661399 | |
| Reliable and Elastic Propagation of Cortical Seizures In Vivo. | Wenzel, Michael; Hamm, Jordan P; Peterka, Darcy S; Yuste, Rafael | Cell reports. | 2017 Jun 27; | 28658617 | |
| A Prospective Study of Age-dependent Changes in Propofol-induced Electroencephalogram Oscillations in Children. | Lee, Johanna M; Akeju, Oluwaseun; Terzakis, Kristina; Pavone, Kara J; Deng, Hao; Houle, Timothy T; Firth, Paul G; Shank, Erik S; Brown, Emery N; Purdon, Patrick L | Anesthesiology. | 2017 08; | 28657957 | |
| Metabolite Measurement: Pitfalls to Avoid and Practices to Follow. | Lu, Wenyun; Su, Xiaoyang; Klein, Matthias S; Lewis, Ian A; Fiehn, Oliver; Rabinowitz, Joshua D | Annual review of biochemistry. | 2017 Jun 20; | 28654323 | |
| CIDE domains form functionally important higher-order assemblies for DNA fragmentation. | Choi, Jae Young; Qiao, Qi; Hong, Se-Hoon; Kim, Chang Min; Jeong, Jae-Hee; Kim, Yeon-Gil; Jung, Yong-Keun; Wu, Hao; Park, Hyun Ho | Proceedings of the National Academy of Sciences of the United States of America. | 2017 Jul 11; | 28652364 | |
| Model-based spike sorting with a mixture of drifting t-distributions. | Shan, Kevin Q; Lubenov, Evgueniy V; Siapas, Athanassios G | Journal of neuroscience methods. | 2017 Aug 15; | 28652008 | |
| The relationship between cardiac endothelium and fibroblasts: it's complicated. | Karra, Ravi; Walter, Agoston O; Wu, Sean M | The Journal of clinical investigation. | 2017 Aug 01; | 28650344 | |
| Inverse Opal Scaffolds and Their Biomedical Applications. | Zhang, Yu Shrike; Zhu, Chunlei; Xia, Younan | Advanced materials (Deerfield Beach, Fla.). | 2017 Sep; | 28649794 | |
| Light in diagnosis, therapy and surgery. | Yun, Seok Hyun; Kwok, Sheldon J J | Nature biomedical engineering. | 2017; | 28649464 | |
| An efficient methodology to introduce o-(aminomethyl)phenyl-boronic acids into peptides: alkylation of secondary amines. | Hernandez, Erik T; Kolesnichenko, Igor V; Reuther, James F; Anslyn, Eric V | New journal of chemistry = Nouveau journal de chimie. | 2017 Jan 07; | 28649175 | |
| Myofilament protein dynamics modulate EAD formation in human hypertrophic cardiomyopathy. | Zile, Melanie A; Trayanova, Natalia A | Progress in biophysics and molecular biology. | 2017 Nov; | 28648627 | |
| High-resolution deep functional imaging of the whole mouse brain by photoacoustic computed tomography in?vivo. | Zhang, Pengfei; Li, Lei; Lin, Li; Hu, Peng; Shi, Junhui; He, Yun; Zhu, Liren; Zhou, Yong; Wang, Lihong V | Journal of biophotonics. | 2017 Jun 21; | 28635056 | |
| Microbial Genetic Composition Tunes Host Longevity. | Han, Bing; Sivaramakrishnan, Priya; Lin, Chih-Chun J; Neve, Isaiah A A; He, Jingquan; Tay, Li Wei Rachel; Sowa, Jessica N; Sizovs, Antons; Du, Guangwei; Wang, Jin; Herman, Christophe; Wang, Meng C | Cell. | 2017 Jun 15; | 28622510 | |
| Structure and Dynamics of RNA Repeat Expansions That Cause Huntington's Disease and Myotonic Dystrophy Type 1. | Chen, Jonathan L; VanEtten, Damian M; Fountain, Matthew A; Yildirim, Ilyas; Disney, Matthew D | Biochemistry. | 2017 07 11; | 28617590 | |
| Identification and Heterologous Production of a Benzoyl-Primed Tricarboxylic Acid Polyketide Intermediate from the Zaragozic Acid A Biosynthetic Pathway. | Liu, Nicholas; Hung, Yiu-Sun; Gao, Shu-Shan; Hang, Leibniz; Zou, Yi; Chooi, Yit-Heng; Tang, Yi | Organic letters. | 2017 Jul 07; | 28605916 | |
| Unconventional Roles of Opsins. | Leung, Nicole Y; Montell, Craig | Annual review of cell and developmental biology. | 2017 10 06; | 28598695 | |
| Biodegradable Polyphosphazene-Based Blends for Regenerative Engineering. | Ogueri, Kenneth S; Escobar Ivirico, Jorge L; Nair, Lakshmi S; Allcock, Harry R; Laurencin, Cato T | Regenerative engineering and translational medicine. | 2017 Mar; | 28596987 | |
| Integration of over 9,000 mass spectrometry experiments builds a global map of human protein complexes. | Drew, Kevin; Lee, Chanjae; Huizar, Ryan L; Tu, Fan; Borgeson, Blake; McWhite, Claire D; Ma, Yun; Wallingford, John B; Marcotte, Edward M | Molecular systems biology. | 2017 Jun 08; | 28596423 | |
| Evaluating Public Health Interventions: 6. Modeling Ratios or Differences? Let the Data Tell Us. | Spiegelman, Donna; VanderWeele, Tyler J | American journal of public health. | 2017 Jul; | 28590865 | |
| Engineered Cpf1 variants with altered PAM specificities. | Gao, Linyi; Cox, David B T; Yan, Winston X; Manteiga, John C; Schneider, Martin W; Yamano, Takashi; Nishimasu, Hiroshi; Nureki, Osamu; Crosetto, Nicola; Zhang, Feng | Nature biotechnology. | 2017 Jun 05; | 28581492 | |
| YY1 Expression Is Sufficient for the Maintenance of Cardiac Progenitor Cell State. | Gregoire, Serge; Li, Guang; Sturzu, Anthony C; Schwartz, Robert J; Wu, Sean M | Stem cells (Dayton, Ohio). | 2017 08; | 28580685 | |
| Unravelling and Exploiting Astrocyte Dysfunction in Huntington's Disease. | Khakh, Baljit S; Beaumont, Vahri; Cachope, Roger; Munoz-Sanjuan, Ignacio; Goldman, Steven A; Grantyn, Rosemarie | Trends in neurosciences. | 2017 Jul; | 28578789 | |
| Noninvasive Deep Brain Stimulation via Temporally Interfering Electric Fields. | Grossman, Nir; Bono, David; Dedic, Nina; Kodandaramaiah, Suhasa B; Rudenko, Andrii; Suk, Ho-Jun; Cassara, Antonino M; Neufeld, Esra; Kuster, Niels; Tsai, Li-Huei; Pascual-Leone, Alvaro; Boyden, Edward S | Cell. | 2017 Jun 01; | 28575667 | |
| Mesoscale-duration activated states gate spiking in response to fast rises in membrane voltage in the awake brain. | Singer, Annabelle C; Talei Franzesi, Giovanni; Kodandaramaiah, Suhasa B; Flores, Francisco J; Cohen, Jeremy D; Lee, Albert K; Börgers, Christoph; Forest, Craig R; Kopell, Nancy J; Boyden, Edward S | Journal of neurophysiology. | 2017 May 31; | 28566460 | |
| Fast label-free multilayered histology-like imaging of human breast cancer by photoacoustic microscopy. | Wong, Terence T W; Zhang, Ruiying; Hai, Pengfei; Zhang, Chi; Pleitez, Miguel A; Aft, Rebecca L; Novack, Deborah V; Wang, Lihong V | Science advances. | 2017 May; | 28560329 | |
| The autism-linked UBE3A T485A mutant E3 ubiquitin ligase activates the Wnt/?-catenin pathway by inhibiting the proteasome. | Yi, Jason J; Paranjape, Smita R; Walker, Matthew P; Choudhury, Rajarshi; Wolter, Justin M; Fragola, Giulia; Emanuele, Michael J; Major, Michael B; Zylka, Mark J | The Journal of biological chemistry. | 2017 May 30; | 28559284 | |
| A Polecat's View of Patrolling Monocytes. | Williams, Jesse W; Randolph, Gwendalyn J; Zinselmeyer, Bernd H | Circulation research. | 2017 May 26; | 28546349 | |
| Inference and Evolutionary Analysis of Genome-Scale Regulatory Networks in Large Phylogenies. | Koch, Christopher; Konieczka, Jay; Delorey, Toni; Lyons, Ana; Socha, Amanda; Davis, Kathleen; Knaack, Sara A; Thompson, Dawn; O'Shea, Erin K; Regev, Aviv; Roy, Sushmita | Cell systems. | 2017 May 24; | 28544882 | |
| Systems-wide Studies Uncover Commander, a Multiprotein Complex Essential to Human Development. | Mallam, Anna L; Marcotte, Edward M | Cell systems. | 2017 May 24; | 28544880 | |
| An American Crisis: the Lack of Black Men in Medicine. | Laurencin, Cato T; Murray, Marsha | Journal of racial and ethnic health disparities. | 2017 Jun; | 28534304 | |
| Coordinated and Iterative Enzyme Catalysis in Fungal Polyketide Biosynthesis. | Hang, Leibniz; Liu, Nicholas; Tang, Yi | ACS catalysis. | 2016 Sep 02; | 28529817 | |
| CaMKII Autophosphorylation Is Necessary for Optimal Integration of Ca(2+) Signals during LTP Induction, but Not Maintenance. | Chang, Jui-Yun; Parra-Bueno, Paula; Laviv, Tal; Szatmari, Erzsebet M; Lee, Seok-Jin R; Yasuda, Ryohei | Neuron. | 2017 May 17; | 28521133 | |
| Mechanism of the P450-Catalyzed Oxidative Cyclization in the Biosynthesis of Griseofulvin. | Grandner, Jessica M; Cacho, Ralph A; Tang, Yi; Houk, K N | ACS catalysis. | 2016 Jul 01; | 28503354 | |
| Extraction and quantitation of NAD(P)(H). | Lu, Wenyun; Wang, Lin; Chen, Li; Hui, Sheng; Rabinowitz, Joshua D | Antioxidants & redox signaling. | 2017 May 12; | 28497978 | |
| BLISS is a versatile and quantitative method for genome-wide profiling of DNA double-strand breaks. | Yan, Winston X; Mirzazadeh, Reza; Garnerone, Silvano; Scott, David; Schneider, Martin W; Kallas, Tomasz; Custodio, Joaquin; Wernersson, Erik; Li, Yinqing; Gao, Linyi; Federova, Yana; Zetsche, Bernd; Zhang, Feng; Bienko, Magda; Crosetto, Nicola | Nature communications. | 2017 May 12; | 28497783 | |
| Whole-brain serial-section electron microscopy in larval zebrafish. | Hildebrand, David Grant Colburn; Cicconet, Marcelo; Torres, Russel Miguel; Choi, Woohyuk; Quan, Tran Minh; Moon, Jungmin; Wetzel, Arthur Willis; Scott Champion, Andrew; Graham, Brett Jesse; Randlett, Owen; Plummer, George Scott; Portugues, Ruben; Bianco, Isaac Henry; Saalfeld, Stephan; Baden, Alexander David; Lillaney, Kunal; Burns, Randal; Vogelstein, Joshua Tzvi; Schier, Alexander Franz; Lee, Wei-Chung Allen; Jeong, Won-Ki; Lichtman, Jeff William; Engert, Florian | Nature. | 2017 05 18; | 28489821 | |
| Immunological implications of pregnancy-induced microchimerism. | Kinder, Jeremy M; Stelzer, Ina A; Arck, Petra C; Way, Sing Sing | Nature reviews. Immunology. | 2017 Aug; | 28480895 | |
| Cholesterol Accumulation in Dendritic Cells Links the Inflammasome to Acquired Immunity. | Westerterp, Marit; Gautier, Emmanuel L; Ganda, Anjali; Molusky, Matthew M; Wang, Wei; Fotakis, Panagiotis; Wang, Nan; Randolph, Gwendalyn J; D'Agati, Vivette D; Yvan-Charvet, Laurent; Tall, Alan R | Cell metabolism. | 2017 Jun 06; | 28479366 | |
| Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses. | Lavin, Yonit; Kobayashi, Soma; Leader, Andrew; Amir, El-Ad David; Elefant, Naama; Bigenwald, Camille; Remark, Romain; Sweeney, Robert; Becker, Christian D; Levine, Jacob H; Meinhof, Klaus; Chow, Andrew; Kim-Shulze, Seunghee; Wolf, Andrea; Medaglia, Chiara | Cell. | 2017 May 04; | 28475900 | |
| An Immune Atlas of Clear Cell Renal Cell Carcinoma. | Chevrier, Stéphane; Levine, Jacob Harrison; Zanotelli, Vito Riccardo Tomaso; Silina, Karina; Schulz, Daniel; Bacac, Marina; Ries, Carola Hermine; Ailles, Laurie; Jewett, Michael Alexander Spencer; Moch, Holger; van den Broek, Maries; Beisel, Christian; St | Cell. | 2017 May 04; | 28475899 | |
| Nucleotide-time alignment for molecular recorders. | Cybulski, Thaddeus R; Boyden, Edward S; Church, George M; Tyo, Keith E J; Kording, Konrad P | PLoS computational biology. | 2017 May; | 28459860 | |
| Spatially Adaptive Multi-Scale Optimization for Local Parameter Estimation in Cardiac Electrophysiology. | Dhamala, Jwala; Arevalo, Hermenegild J; Sapp, John; Horacek, Milan; Wu, Katherine C; Trayanova, Natalia A; Wang, Linwei | IEEE transactions on medical imaging. | 2017 09; | 28459685 | |
| CIRCLE-seq: a highly sensitive in vitro screen for genome-wide CRISPR-Cas9 nuclease off-targets. | Tsai, Shengdar Q; Nguyen, Nhu T; Malagon-Lopez, Jose; Topkar, Ved V; Aryee, Martin J; Joung, J Keith | Nature methods. | 2017 Jun; | 28459458 | |
| Single-cell topological RNA-seq analysis reveals insights into cellular differentiation and development. | Rizvi, Abbas H; Camara, Pablo G; Kandror, Elena K; Roberts, Thomas J; Schieren, Ira; Maniatis, Tom; Rabadan, Raul | Nature biotechnology. | 2017 Jun; | 28459448 | |
| Pcdh?c2 is required for axonal tiling and assembly of serotonergic circuitries in mice. | Chen, Weisheng V; Nwakeze, Chiamaka L; Denny, Christine A; O'Keeffe, Sean; Rieger, Michael A; Mountoufaris, George; Kirner, Amy; Dougherty, Joseph D; Hen, René; Wu, Qiang; Maniatis, Tom | Science (New York, N.Y.). | 2017 04 28; | 28450636 | |
| Strategies for the acquisition of transcriptional and epigenetic information in single cells. | Li, Guang; Dzilic, Elda; Flores, Nick; Shieh, Alice; Wu, Sean M | Journal of thoracic disease. | 2017 Mar; | 28446964 | |
| Cell diversity and network dynamics in photosensitive human brain organoids. | Quadrato, Giorgia; Nguyen, Tuan; Macosko, Evan Z; Sherwood, John L; Min Yang, Sung; Berger, Daniel R; Maria, Natalie; Scholvin, Jorg; Goldman, Melissa; Kinney, Justin P; Boyden, Edward S; Lichtman, Jeff W; Williams, Ziv M; McCarroll, Steven A; Arlotta, Paola | Nature. | 2017 May 04; | 28445462 | |
| Microbial metabolites regulate host lipid metabolism through NR5A-Hedgehog signalling. | Lin, Chih-Chun Janet; Wang, Meng C | Nature cell biology. | 2017 May; | 28436966 | |
| rAMPing Up Stress Signaling: Protein AMPylation in Metazoans. | Truttmann, Matthias C; Ploegh, Hidde L | Trends in cell biology. | 2017 Apr 19; | 28433487 | |
| Engineering genetic circuit interactions within and between synthetic minimal cells. | Adamala, Katarzyna P; Martin-Alarcon, Daniel A; Guthrie-Honea, Katriona R; Boyden, Edward S | Nature chemistry. | 2017 May; | 28430194 | |
| Epithelial-to-Mesenchymal Transition Contributes to Immunosuppression in Breast Carcinomas. | Dongre, Anushka; Rashidian, Mohammad; Reinhardt, Ferenc; Bagnato, Aaron; Keckesova, Zuzana; Ploegh, Hidde L; Weinberg, Robert A | Cancer research. | 2017 Aug 01; | 28428275 | |
| Super-multiplex vibrational imaging. | Wei, Lu; Chen, Zhixing; Shi, Lixue; Long, Rong; Anzalone, Andrew V; Zhang, Luyuan; Hu, Fanghao; Yuste, Rafael; Cornish, Virginia W; Min, Wei | Nature. | 2017 Apr 27; | 28424513 | |
| Human umbilical cord plasma proteins revitalize hippocampal function in aged mice. | Castellano, Joseph M; Mosher, Kira I; Abbey, Rachelle J; McBride, Alisha A; James, Michelle L; Berdnik, Daniela; Shen, Jadon C; Zou, Bende; Xie, Xinmin S; Tingle, Martha; Hinkson, Izumi V; Angst, Martin S; Wyss-Coray, Tony | Nature. | 2017 04 27; | 28424512 | |
| Iterative expansion microscopy. | Chang, Jae-Byum; Chen, Fei; Yoon, Young-Gyu; Jung, Erica E; Babcock, Hazen; Kang, Jeong Seuk; Asano, Shoh; Suk, Ho-Jun; Pak, Nikita; Tillberg, Paul W; Wassie, Asmamaw T; Cai, Dawen; Boyden, Edward S | Nature methods. | 2017 Jun; | 28417997 | |
| Blood-Brain Barrier Permeability Is Regulated by Lipid Transport-Dependent Suppression of Caveolae-Mediated Transcytosis. | Andreone, Benjamin J; Chow, Brian Wai; Tata, Aleksandra; Lacoste, Baptiste; Ben-Zvi, Ayal; Bullock, Kevin; Deik, Amy A; Ginty, David D; Clish, Clary B; Gu, Chenghua | Neuron. | 2017 Apr 11; | 28416077 | |
| Camptothecin resistance is determined by the regulation of topoisomerase I degradation mediated by ubiquitin proteasome pathway. | Ando, Koji; Shah, Ankur K; Sachdev, Vibhu; Kleinstiver, Benjamin P; Taylor-Parker, Julian; Welch, Moira M; Hu, Yiheng; Salgia, Ravi; White, Forest M; Parvin, Jeffrey D; Ozonoff, Al; Rameh, Lucia E; Joung, J Keith; Bharti, Ajit K | Oncotarget. | 2017 Jul 04; | 28415827 | |
| Nucleic acid detection with CRISPR-Cas13a/C2c2. | Gootenberg, Jonathan S; Abudayyeh, Omar O; Lee, Jeong Wook; Essletzbichler, Patrick; Dy, Aaron J; Joung, Julia; Verdine, Vanessa; Donghia, Nina; Daringer, Nichole M; Freije, Catherine A; Myhrvold, Cameron; Bhattacharyya, Roby P; Livny, Jonathan; Regev, Aviv; Koonin, Eugene V; Hung, Deborah T; Sabeti, Pardis C; Collins, James J; Zhang, Feng | Science (New York, N.Y.). | 2017 Apr 28; | 28408723 | |
| Single-cell whole-genome analyses by Linear Amplification via Transposon Insertion (LIANTI). | Chen, Chongyi; Xing, Dong; Tan, Longzhi; Li, Heng; Zhou, Guangyu; Huang, Lei; Xie, X Sunney | Science (New York, N.Y.). | 2017 Apr 14; | 28408603 | |
| The Landscape Ecology and Microbiota of the Human Nose, Mouth, and Throat. | Proctor, Diana M; Relman, David A | Cell host & microbe. | 2017 Apr 12; | 28407480 | |
| Automated deep-phenotyping of the vertebrate brain. | Allalou, Amin; Wu, Yuelong; Ghannad-Rezaie, Mostafa; Eimon, Peter M; Yanik, Mehmet Fatih | eLife. | 2017 Apr 13; | 28406399 | |
| Chd8 Mutation Leads to Autistic-like Behaviors and Impaired Striatal Circuits. | Platt, Randall J; Zhou, Yang; Slaymaker, Ian M; Shetty, Ashwin S; Weisbach, Niels R; Kim, Jin-Ah; Sharma, Jitendra; Desai, Mitul; Sood, Sabina; Kempton, Hannah R; Crabtree, Gerald R; Feng, Guoping; Zhang, Feng | Cell reports. | 2017 Apr 11; | 28402856 | |
| The impact of common dopamine D2 receptor gene polymorphisms on D2/3 receptor availability: C957T as a key determinant in putamen and ventral striatum. | Smith, C T; Dang, L C; Buckholtz, J W; Tetreault, A M; Cowan, R L; Kessler, R M; Zald, D H | Translational psychiatry. | 2017 Apr 11; | 28398340 | |
| Vesicular stomatitis virus N protein-specific single-domain antibody fragments inhibit replication. | Hanke, Leo; Schmidt, Florian I; Knockenhauer, Kevin E; Morin, Benjamin; Whelan, Sean Pj; Schwartz, Thomas U; Ploegh, Hidde L | EMBO reports. | 2017 Jun; | 28396572 | |
| Taking Stock of Retinal Gene Therapy: Looking Back and Moving Forward. | Bennett, Jean | Molecular therapy : the journal of the American Society of Gene Therapy. | 2017 May 03; | 28391961 | |
| Contractile force generation by 3D hiPSC-derived cardiac tissues is enhanced by rapid establishment of cellular interconnection in matrix with muscle-mimicking stiffness. | Lee, Soah; Serpooshan, Vahid; Tong, Xinming; Venkatraman, Sneha; Lee, Meelim; Lee, Jaecheol; Chirikian, Orlando; Wu, Joseph C; Wu, Sean M; Yang, Fan | Biomaterials. | 2017 Jul; | 28384492 | |
| Altered Cortical Ensembles in Mouse Models of Schizophrenia. | Hamm, Jordan P; Peterka, Darcy S; Gogos, Joseph A; Yuste, Rafael | Neuron. | 2017 Apr 05; | 28384469 | |
| Using DNA Methylation Profiling to Evaluate Biological Age and Longevity Interventions. | Petkovich, Daniel A; Podolskiy, Dmitriy I; Lobanov, Alexei V; Lee, Sang-Goo; Miller, Richard A; Gladyshev, Vadim N | Cell metabolism. | ; | 28380383 | |
| Understanding CARD Tricks in Apoptosomes. | Wang, Li; Qiao, Qi; Wu, Hao | Structure (London, England : 1993). | 2017 Apr 04; | 28380338 | |
| Mono-unsaturated fatty acids link H3K4me3 modifiers to C. elegans lifespan. | Han, Shuo; Schroeder, Elizabeth A; Silva-García, Carlos G; Hebestreit, Katja; Mair, William B; Brunet, Anne | Nature. | 2017 Apr 13; | 28379943 | |
| Bioacoustic-enabled patterning of human iPSC-derived cardiomyocytes into 3D cardiac tissue. | Serpooshan, Vahid; Chen, Pu; Wu, Haodi; Lee, Soah; Sharma, Arun; Hu, Daniel A; Venkatraman, Sneha; Ganesan, Adarsh Venkataraman; Usta, Osman Berk; Yarmush, Martin; Yang, Fan; Wu, Joseph C; Demirci, Utkan; Wu, Sean M | Biomaterials. | ; | 28376365 | |
| Selective Enzymatic Demethylation of N2 ,N2 -Dimethylguanosine in RNA and Its Application in High-Throughput tRNA Sequencing. | Dai, Qing; Zheng, Guanqun; Schwartz, Michael H; Clark, Wesley C; Pan, Tao | Angewandte Chemie (International ed. in English). | 2017 Apr 24; | 28371071 | |
| Glial Calcium Waves are Triggered by Seizure Activity and Not Essential for Initiating Ictal Onset or Neurovascular Coupling. | Baird-Daniel, Eliza; Daniel, Andy G S; Wenzel, Michael; Li, Dan; Liou, Jyun-You; Laffont, Philippe; Zhao, Mingrui; Yuste, Rafael; Ma, Hongtao; Schwartz, Theodore H | Cerebral cortex (New York, N.Y. : 1991). | 2017 06 01; | 28369176 | |
| Non-overlapping Neural Networks in Hydra vulgaris. | Dupre, Christophe; Yuste, Rafael | Current biology : CB. | 2017 Apr 24; | 28366745 | |
| Collaborative Biosynthesis of Maleimide- and Succinimide-Containing Natural Products by Fungal Polyketide Megasynthases. | Sato, Michio; Dander, Jacob E; Sato, Chizuru; Hung, Yiu-Sun; Gao, Shu-Shan; Tang, Man-Cheng; Hang, Leibniz; Winter, Jaclyn M; Garg, Neil K; Watanabe, Kenji; Tang, Yi | Journal of the American Chemical Society. | 2017 Apr 19; | 28365998 | |
| In vivo imaging of neural activity. | Yang, Weijian; Yuste, Rafael | Nature methods. | 2017 Apr; | 28362436 | |
| Exosome-associated AAV2 vector mediates robust gene delivery into the murine retina upon intravitreal injection. | Wassmer, Sarah J; Carvalho, Livia S; György, Bence; Vandenberghe, Luk H; Maguire, Casey A | Scientific reports. | 2017 Mar 31; | 28361998 | |
| Poly(GP) proteins are a useful pharmacodynamic marker for C9ORF72-associated amyotrophic lateral sclerosis. | Gendron, Tania F; Chew, Jeannie; Stankowski, Jeannette N; Hayes, Lindsey R; Zhang, Yong-Jie; Prudencio, Mercedes; Carlomagno, Yari; Daughrity, Lillian M; Jansen-West, Karen; Perkerson, Emilie A; O'Raw, Aliesha; Cook, Casey; Pregent, Luc; Belzil, Veronique; van Blitterswijk, Marka; Tabassian, Lilia J; Lee, Chris W; Yue, Mei; Tong, Jimei; Song, Yuping; Castanedes-Casey, Monica; Rousseau, Linda; Phillips, Virginia; Dickson, Dennis W; Rademakers, Rosa; Fryer, John D; Rush, Beth K; Pedraza, Otto; Caputo, Ana M; Desaro, Pamela; Palmucci, Carla; Robertson, Amelia; Heckman, Michael G; Diehl, Nancy N; Wiggs, Edythe; Tierney, Michael; Braun, Laura; Farren, Jennifer; Lacomis, David; Ladha, Shafeeq; Fournier, Christina N; McCluskey, Leo F; Elman, Lauren B; Toledo, Jon B; McBride, Jennifer D; Tiloca, Cinzia; Morelli, Claudia; Poletti, Barbara; Solca, Federica; Prelle, Alessandro; Wuu, Joanne; Jockel-Balsarotti, Jennifer; Rigo, Frank; Ambrose, Christine; Datta, Abhishek; Yang, Weixing; Raitcheva, Denitza; Antognetti, Giovanna; McCampbell, Alexander; Van Swieten, John C; Miller, Bruce L; Boxer, Adam L; Brown, Robert H; Bowser, Robert; Miller, Timothy M; Trojanowski, John Q; Grossman, Murray; Berry, James D; Hu, William T; Ratti, Antonia; Traynor, Bryan J; Disney, Matthew D; Benatar, Michael; Silani, Vincenzo; Glass, Jonathan D; Floeter, Mary Kay; Rothstein, Jeffrey D; Boylan, Kevin B; Petrucelli, Leonard | Science translational medicine. | 2017 Mar 29; | 28356511 | |
| SMARCAD1 Contributes to the Regulation of Naive Pluripotency by Interacting with Histone Citrullination. | Xiao, Shu; Lu, Jia; Sridhar, Bharat; Cao, Xiaoyi; Yu, Pengfei; Zhao, Tianyi; Chen, Chieh-Chun; McDee, Darina; Sloofman, Laura; Wang, Yang; Rivas-Astroza, Marcelo; Telugu, Bhanu Prakash V L; Levasseur, Dana; Zhang, Kang; Liang, Han; Zhao, Jing Crystal; Tanaka, Tetsuya S; Stormo, Gary; Zhong, Sheng | Cell reports. | 2017 Mar 28; | 28355564 | |
| High-numerical-aperture cryogenic light microscopy for increased precision of superresolution reconstructions. | Nahmani, Marc; Lanahan, Conor; DeRosier, David; Turrigiano, Gina G | Proceedings of the National Academy of Sciences of the United States of America. | 2017 Apr 11; | 28348224 | |
| Potential energy landscapes identify the information-theoretic nature of the epigenome. | Jenkinson, Garrett; Pujadas, Elisabet; Goutsias, John; Feinberg, Andrew P | Nature genetics. | 2017 May; | 28346445 | |
| Internal valence modulates the speed of object recognition. | Panichello, Matthew F; Kveraga, Kestutis; Chaumon, Maximilien; Bar, Moshe; Barrett, Lisa Feldman | Scientific reports. | 2017 Mar 23; | 28336933 | |
| Gradual Suppression of Transcytosis Governs Functional Blood-Retinal Barrier Formation. | Chow, Brian Wai; Gu, Chenghua | Neuron. | 2017 Mar 22; | 28334606 | |
| Genome-scale CRISPR-Cas9 knockout and transcriptional activation screening. | Joung, Julia; Konermann, Silvana; Gootenberg, Jonathan S; Abudayyeh, Omar O; Platt, Randall J; Brigham, Mark D; Sanjana, Neville E; Zhang, Feng | Nature protocols. | 2017 Apr; | 28333914 | |
| Resveratrol Improves Vascular Function and Mitochondrial Number but Not Glucose Metabolism in Older Adults. | Pollack, Rena M; Barzilai, Nir; Anghel, Valentin; Kulkarni, Ameya S; Golden, Aaron; O'Broin, Pilib; Sinclair, David A; Bonkowski, Michael S; Coleville, Alexander J; Powell, Danielle; Kim, Sharon; Moaddel, Ruin; Stein, Daniel; Zhang, Kehao; Hawkins, Meredi | The journals of gerontology. Series A, Biological sciences and medical sciences. | 2017 Nov 09; | 28329397 | |
| Partial Reprogramming of Pluripotent Stem Cell-Derived Cardiomyocytes into Neurons. | Chuang, Wenpo; Sharma, Arun; Shukla, Praveen; Li, Guang; Mall, Moritz; Rajarajan, Kuppusamy; Abilez, Oscar J; Hamaguchi, Ryoko; Wu, Joseph C; Wernig, Marius; Wu, Sean M | Scientific reports. | 2017 Mar 22; | 28327614 | |
| Kinetics of Endogenous CaMKII Required for Synaptic Plasticity Revealed by Optogenetic Kinase Inhibitor. | Murakoshi, Hideji; Shin, Myung Eun; Parra-Bueno, Paula; Szatmari, Erzsebet M; Shibata, Akihiro C E; Yasuda, Ryohei | Neuron. | 2017 Apr 05; | 28318784 | |
| Untangling the Biology of Genetic Cardiomyopathies with Pluripotent Stem Cell Disease Models. | Buikema, Jan W; Wu, Sean M | Current cardiology reports. | 2017 04; | 28315121 | |
| Cardiac Regeneration: Lessons From Development. | Galdos, Francisco X; Guo, Yuxuan; Paige, Sharon L; VanDusen, Nathan J; Wu, Sean M; Pu, William T | Circulation research. | 2017 Mar 17; | 28302741 | |
| Imaging and Optically Manipulating Neuronal Ensembles. | Carrillo-Reid, Luis; Yang, Weijian; Kang Miller, Jae-Eun; Peterka, Darcy S; Yuste, Rafael | Annual review of biophysics. | 2017 May 22; | 28301770 | |
| Discovering sparse transcription factor codes for cell states and state transitions during development. | Furchtgott, Leon A; Melton, Samuel; Menon, Vilas; Ramanathan, Sharad | eLife. | 2017 Mar 15; | 28296636 | |
| Dynamics of embryonic stem cell differentiation inferred from single-cell transcriptomics show a series of transitions through discrete cell states. | Jang, Sumin; Choubey, Sandeep; Furchtgott, Leon; Zou, Ling-Nan; Doyle, Adele; Menon, Vilas; Loew, Ethan B; Krostag, Anne-Rachel; Martinez, Refugio A; Madisen, Linda; Levi, Boaz P; Ramanathan, Sharad | eLife. | 2017 Mar 15; | 28296635 | |
| Mating and male pheromone kill Caenorhabditis males through distinct mechanisms. | Shi, Cheng; Runnels, Alexi M; Murphy, Coleen T | eLife. | 2017 Mar 14; | 28290982 | |
| Imaging ERK and PKA Activation in Single Dendritic Spines during Structural Plasticity. | Tang, Shen; Yasuda, Ryohei | Neuron. | 2017 Mar 22; | 28285819 | |
| Single-Cell Profiling of an In Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation. | Close, Jennie L; Yao, Zizhen; Levi, Boaz P; Miller, Jeremy A; Bakken, Trygve E; Menon, Vilas; Ting, Jonathan T; Wall, Abigail; Krostag, Anne-Rachel; Thomsen, Elliot R; Nelson, Angel M; Mich, John K; Hodge, Rebecca D; Shehata, Soraya I; Glass, Ian A; Bort, Susan; Shapovalova, Nadiya V; Ngo, N Kiet; Grimley, Joshua S; Phillips, John W; Thompson, Carol L; Ramanathan, Sharad; Lein, Ed | Neuron. | 2017 Mar 08; | 28279351 | |
| Non-enzymatic molecular damage as a prototypic driver of aging. | Golubev, Alexey; Hanson, Andrew D; Gladyshev, Vadim N | The Journal of biological chemistry. | 2017 Apr 14; | 28264930 | |
| Determinants of Adiposity Rebound Timing in Children. | Ip, Edward H; Marshall, Sarah A; Saldana, Santiago; Skelton, Joseph A; Suerken, Cynthia K; Arcury, Thomas A; Quandt, Sara A | The Journal of pediatrics. | 2017 May; | 28242030 | |
| Dry coupling for whole-body small-animal photoacoustic computed tomography. | Yeh, Chenghung; Li, Lei; Zhu, Liren; Xia, Jun; Li, Chiye; Chen, Wanyi; Garcia-Uribe, Alejandro; Maslov, Konstantin I; Wang, Lihong V | Journal of biomedical optics. | 2017 04 01; | 28241305 | |
| Enzyme-Catalyzed Intramolecular Enantioselective Hydroalkoxylation. | Gao, Shu-Shan; Garcia-Borràs, Marc; Barber, Joyann S; Hai, Yang; Duan, Abing; Garg, Neil K; Houk, K N; Tang, Yi | Journal of the American Chemical Society. | 2017 Mar 15; | 28240554 | |
| Measuring speaker-listener neural coupling with functional near infrared spectroscopy. | Liu, Yichuan; Piazza, Elise A; Simony, Erez; Shewokis, Patricia A; Onaral, Banu; Hasson, Uri; Ayaz, Hasan | Scientific reports. | 2017 Feb 27; | 28240295 | |
| Age-associated molecular changes are deleterious and may modulate life span through diet. | Lee, Sang-Goo; Kaya, Alaattin; Avanesov, Andrei S; Podolskiy, Dmitriy I; Song, Eun Ju; Go, Du-Min; Jin, Gwi-Deuk; Hwang, Jae Yeon; Kim, Eun Bae; Kim, Dae-Yong; Gladyshev, Vadim N | Science advances. | 2017 Feb; | 28232953 | |
| Optical control of cell signaling by single-chain photoswitchable kinases. | Zhou, Xin X; Fan, Linlin Z; Li, Pengpeng; Shen, Kang; Lin, Michael Z | Science (New York, N.Y.). | 2017 02 24; | 28232577 | |
| Myeloid cells pave the way for lymphatic system development and maintenance. | Ivanov, Stoyan; Randolph, Gwendalyn J | Pflugers Archiv : European journal of physiology. | 2017 Apr; | 28220247 | |
| Noninvasive Imaging of Human Immune Responses in a Human Xenograft Model of Graft-Versus-Host Disease. | Van Elssen, Catharina H M J; Rashidian, Mohammad; Vrbanac, Vladimir; Wucherpfennig, Kai W; Habre, Zeina El; Sticht, Jana; Freund, Christian; Jacobsen, Johanne T; Cragnolini, Juanjo; Ingram, Jessica; Plaisier, Loes; Spierings, Eric; Tager, Andrew M; Ploegh, Hidde L | Journal of nuclear medicine : official publication, Society of Nuclear Medicine. | 2017 Jun; | 28209904 | |
| Mammalian Heart Regeneration: The Race to the Finish Line. | Doppler, Stefanie A; Deutsch, Marcus-Andre; Serpooshan, Vahid; Li, Guang; Dzilic, Elda; Lange, Rüdiger; Krane, Markus; Wu, Sean M | Circulation research. | 2017 Feb 17; | 28209796 | |
| High-throughput screening of tyrosine kinase inhibitor cardiotoxicity with human induced pluripotent stem cells. | Sharma, Arun; Burridge, Paul W; McKeithan, Wesley L; Serrano, Ricardo; Shukla, Praveen; Sayed, Nazish; Churko, Jared M; Kitani, Tomoya; Wu, Haodi; Holmström, Alexandra; Matsa, Elena; Zhang, Yuan; Kumar, Anusha; Fan, Alice C; Del Álamo, Juan C; Wu, Sean M; Moslehi, Javid J; Mercola, Mark; Wu, Joseph C | Science translational medicine. | 2017 Feb 15; | 28202772 | |
| Qualitative analysis of repaired filtering blebs with anterior segment-optical coherence tomography. | Cerdà-Ibáñez, M; Pérez-Torregrosa, V T; Olate-Pérez, A; Almor Palacios, I; Gargallo-Benedicto, A; Osorio-Alayo, V; Barreiro Rego, A; Duch-Samper, A | Archivos de la Sociedad Espanola de Oftalmologia. | 2017 Feb 07; | 28188019 | |
| Gene therapy restores auditory and vestibular function in a mouse model of Usher syndrome type 1c. | Pan, Bifeng; Askew, Charles; Galvin, Alice; Heman-Ackah, Selena; Asai, Yukako; Indzhykulian, Artur A; Jodelka, Francine M; Hastings, Michelle L; Lentz, Jennifer J; Vandenberghe, Luk H; Holt, Jeffrey R; Géléoc, Gwenaëlle S | Nature biotechnology. | 2017 Mar; | 28165476 | |
| A synthetic AAV vector enables safe and efficient gene transfer to the mammalian inner ear. | Landegger, Lukas D; Pan, Bifeng; Askew, Charles; Wassmer, Sarah J; Gluck, Sarah D; Galvin, Alice; Taylor, Ruth; Forge, Andrew; Stankovic, Konstantina M; Holt, Jeffrey R; Vandenberghe, Luk H | Nature biotechnology. | 2017 Mar; | 28165475 | |
| Noninvasive Determination of Melanoma Depth using a Handheld Photoacoustic Probe. | Zhou, Yong; Tripathi, Shivani V; Rosman, Ilana; Ma, Jun; Hai, Pengfei; Linette, Gerald P; Council, M Laurin; Fields, Ryan C; Wang, Lihong V; Cornelius, Lynn A | The Journal of investigative dermatology. | ; | 28163070 | |
| The Quest for the FFA and Where It Led. | Kanwisher, Nancy | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2017 Feb 01; | 28148806 | |
| Massively multiplex single-cell Hi-C. | Ramani, Vijay; Deng, Xinxian; Qiu, Ruolan; Gunderson, Kevin L; Steemers, Frank J; Disteche, Christine M; Noble, William S; Duan, Zhijun; Shendure, Jay | Nature methods. | 2017 Mar; | 28135255 | |
| Monod-Wyman-Changeux Analysis of Ligand-Gated Ion Channel Mutants. | Einav, Tal; Phillips, Rob | The journal of physical chemistry. B. | 2017 Apr 20; | 28134524 | |
| Systematic Mapping of RNA-Chromatin Interactions In Vivo. | Sridhar, Bharat; Rivas-Astroza, Marcelo; Nguyen, Tri C; Chen, Weizhong; Yan, Zhangming; Cao, Xiaoyi; Hebert, Lucie; Zhong, Sheng | Current biology : CB. | 2017 Jan 25; | 28132817 | |
| Submillimeter diffusion tensor imaging and late gadolinium enhancement cardiovascular magnetic resonance of chronic myocardial infarction. | Pashakhanloo, Farhad; Herzka, Daniel A; Mori, Susumu; Zviman, Muz; Halperin, Henry; Gai, Neville; Bluemke, David A; Trayanova, Natalia A; McVeigh, Elliot R | Journal of cardiovascular magnetic resonance : official journal of the Society for Cardiovascular Magnetic Resonance. | 2017 Jan 11; | 28122618 | |
| Single-shot real-time video recording of a photonic Mach cone induced by a scattered light pulse. | Liang, Jinyang; Ma, Cheng; Zhu, Liren; Chen, Yujia; Gao, Liang; Wang, Lihong V | Science advances. | 2017 Jan; | 28116357 | |
| Automated Remote Focusing, Drift Correction, and Photostimulation to Evaluate Structural Plasticity in Dendritic Spines. | Smirnov, Michael S; Evans, Paul R; Garrett, Tavita R; Yan, Long; Yasuda, Ryohei | PloS one. | 2017; | 28114380 | |
| Enzyme-catalyzed cationic epoxide rearrangements in quinolone alkaloid biosynthesis. | Zou, Yi; Garcia-Borràs, Marc; Tang, Mancheng C; Hirayama, Yuichiro; Li, Dehai H; Li, Li; Watanabe, Kenji; Houk, K N; Tang, Yi | Nature chemical biology. | 2017 Jan 23; | 28114276 | |
| Diversity and evolution of class 2 CRISPR-Cas systems. | Shmakov, Sergey; Smargon, Aaron; Scott, David; Cox, David; Pyzocha, Neena; Yan, Winston; Abudayyeh, Omar O; Gootenberg, Jonathan S; Makarova, Kira S; Wolf, Yuri I; Severinov, Konstantin; Zhang, Feng; Koonin, Eugene V | Nature reviews. Microbiology. | ; | 28111461 | |
| Single-Cell Transcriptomic Analysis Defines Heterogeneity and Transcriptional Dynamics in the Adult Neural Stem Cell Lineage. | Dulken, Ben W; Leeman, Dena S; Boutet, Stéphane C; Hebestreit, Katja; Brunet, Anne | Cell reports. | 2017 Jan 17; | 28099854 | |
| A Single-Cell Roadmap of Lineage Bifurcation in Human ESC Models of Embryonic Brain Development. | Yao, Zizhen; Mich, John K; Ku, Sherman; Menon, Vilas; Krostag, Anne-Rachel; Martinez, Refugio A; Furchtgott, Leon; Mulholland, Heather; Bort, Susan; Fuqua, Margaret A; Gregor, Ben W; Hodge, Rebecca D; Jayabalu, Anu; May, Ryan C; Melton, Samuel; Nelson, Angelique M; Ngo, N Kiet; Shapovalova, Nadiya V; Shehata, Soraya I; Smith, Michael W; Tait, Leah J; Thompson, Carol L; Thomsen, Elliot R; Ye, Chaoyang; Glass, Ian A; Kaykas, Ajamete; Yao, Shuyuan; Phillips, John W; Grimley, Joshua S; Levi, Boaz P; Wang, Yanling; Ramanathan, Sharad | Cell stem cell. | 2017 Jan 05; | 28094016 | |
| ''Cross-sectional'' stepped wedge designs always reduce the required sample size when there is no time effect. | Zhou, Xin; Liao, Xiaomei; Spiegelman, Donna | Journal of clinical epidemiology. | 2017 Jan 16; | 28093263 | |
| Nuclear Localization of Mitochondrial TCA Cycle Enzymes as a Critical Step in Mammalian Zygotic Genome Activation. | Nagaraj, Raghavendra; Sharpley, Mark S; Chi, Fangtao; Braas, Daniel; Zhou, Yonggang; Kim, Rachel; Clark, Amander T; Banerjee, Utpal | Cell. | 2017 Jan 12; | 28086092 | |
| A Periplasmic Polymer Curves Vibrio cholerae and Promotes Pathogenesis. | Bartlett, Thomas M; Bratton, Benjamin P; Duvshani, Amit; Miguel, Amanda; Sheng, Ying; Martin, Nicholas R; Nguyen, Jeffrey P; Persat, Alexandre; Desmarais, Samantha M; VanNieuwenhze, Michael S; Huang, Kerwyn Casey; Zhu, Jun; Shaevitz, Joshua W; Gitai, Zemer | Cell. | 2017 Jan 12; | 28086090 | |
| Enhanced Cell Capture on Functionalized Graphene Oxide Nanosheets through Oxygen Clustering. | Bardhan, Neelkanth M; Kumar, Priyank V; Li, Zeyang; Ploegh, Hidde L; Grossman, Jeffrey C; Belcher, Angela M; Chen, Guan-Yu | ACS nano. | 2017 Feb 28; | 28085249 | |
| A bacterial global regulator forms a prion. | Yuan, Andy H; Hochschild, Ann | Science (New York, N.Y.). | 2017 01 13; | 28082594 | |
| Function and origin of mistranslation in distinct cellular contexts. | Schwartz, Michael H; Pan, Tao | Critical reviews in biochemistry and molecular biology. | 2017 Apr; | 28075177 | |
| Organization of high-level visual cortex in human infants. | Deen, Ben; Richardson, Hilary; Dilks, Daniel D; Takahashi, Atsushi; Keil, Boris; Wald, Lawrence L; Kanwisher, Nancy; Saxe, Rebecca | Nature communications. | 2017 Jan 10; | 28072399 | |
| tRNA Misacylation with Methionine in the Mouse Gut Microbiome in Situ. | Schwartz, Michael H; Pan, Tao | Microbial ecology. | 2017 Jan 09; | 28070678 | |
| CD36 deficiency impairs the small intestinal barrier and induces subclinical inflammation in mice. | Cifarelli, Vincenza; Ivanov, Stoyan; Xie, Yan; Son, Ni-Huiping; Saunders, Brian T; Pietka, Terri A; Shew, Trevor M; Yoshino, Jun; Sundaresan, Sinju; Davidson, Nicholas O; Goldberg, Ira J; Gelman, Andrew E; Zinselmeyer, Bernd H; Randolph, Gwendalyn J; Abumrad, Nada A | Cellular and molecular gastroenterology and hepatology. | 2017 Jan; | 28066800 | |
| Cas13b Is a Type VI-B CRISPR-Associated RNA-Guided RNase Differentially Regulated by Accessory Proteins Csx27 and Csx28. | Smargon, Aaron A; Cox, David B T; Pyzocha, Neena K; Zheng, Kaijie; Slaymaker, Ian M; Gootenberg, Jonathan S; Abudayyeh, Omar A; Essletzbichler, Patrick; Shmakov, Sergey; Makarova, Kira S; Koonin, Eugene V; Zhang, Feng | Molecular cell. | 2017 Feb 16; | 28065598 | |
| Brain State Dependence of Hippocampal Subthreshold Activity in Awake Mice. | Hulse, Brad K; Lubenov, Evgueniy V; Siapas, Athanassios G | Cell reports. | 2017 Jan 03; | 28052244 | |
| Back to the Basics: Cnidarians Start to Fire. | Bosch, Thomas C G; Klimovich, Alexander; Domazet-Lo?o, Tomislav; Gründer, Stefan; Holstein, Thomas W; Jékely, Gáspár; Miller, David J; Murillo-Rincon, Andrea P; Rentzsch, Fabian; Richards, Gemma S; Schröder, Katja; Technau, Ulrich; Yuste, Rafael | Trends in neurosciences. | 2017 Feb; | 28041633 | |
| Ultrastructural evidence for impaired mitochondrial fission in the aged rhesus monkey dorsolateral prefrontal cortex. | Morozov, Yury M; Datta, Dibyadeep; Paspalas, Constantinos D; Arnsten, Amy F T | Neurobiology of aging. | 2017 Mar; | 28027494 | |
| Developmental broadening of inhibitory sensory maps. | Quast, Kathleen B; Ung, Kevin; Froudarakis, Emmanouil; Huang, Longwen; Herman, Isabella; Addison, Angela P; Ortiz-Guzman, Joshua; Cordiner, Keith; Saggau, Peter; Tolias, Andreas S; Arenkiel, Benjamin R | Nature neuroscience. | 2017 Feb; | 28024159 | |
| Direct evidence for cancer-cell-autonomous extracellular protein catabolism in pancreatic tumors. | Davidson, Shawn M; Jonas, Oliver; Keibler, Mark A; Hou, Han Wei; Luengo, Alba; Mayers, Jared R; Wyckoff, Jeffrey; Del Rosario, Amanda M; Whitman, Matthew; Chin, Christopher R; Condon, Kendall J; Lammers, Alex; Kellersberger, Katherine A; Stall, Brian K; Stephanopoulos, Gregory; Bar-Sagi, Dafna; Han, Jongyoon; Rabinowitz, Joshua D; Cima, Michael J; Langer, Robert; Vander Heiden, Matthew G | Nature medicine. | 2017 Feb; | 28024083 | |
| Modelling methodology of atrial fibrosis affects rotor dynamics and electrograms. | Roney, Caroline H; Bayer, Jason D; Zahid, Sohail; Meo, Marianna; Boyle, Patrick M J; Trayanova, Natalia A; Haïssaguerre, Michel; Dubois, Rémi; Cochet, Hubert; Vigmond, Edward J | Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology. | 2016 Dec; | 28011842 | |
| Towards personalized computational modelling of the fibrotic substrate for atrial arrhythmia. | Boyle, Patrick M; Zahid, Sohail; Trayanova, Natalia A | Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology. | 2016 Dec; | 28011841 | |
| A feasibility study of arrhythmia risk prediction in patients with myocardial infarction and preserved ejection fraction. | Deng, Dongdong; Arevalo, Hermenegild J; Prakosa, Adityo; Callans, David J; Trayanova, Natalia A | Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology. | 2016 Dec; | 28011832 | |
| Integrative Analysis of PRKAG2 Cardiomyopathy iPS and Microtissue Models Identifies AMPK as a Regulator of Metabolism, Survival, and Fibrosis. | Hinson, J Travis; Chopra, Anant; Lowe, Andre; Sheng, Calvin C; Gupta, Rajat M; Kuppusamy, Rajarajan; O'Sullivan, John; Rowe, Glenn; Wakimoto, Hiroko; Gorham, Joshua; Zhang, Kehan; Musunuru, Kiran; Gerszten, Robert E; Wu, Sean M; Chen, Christopher S; Seidman, Jonathan G; Seidman, Christine E | Cell reports. | 2016 Dec 20; | 28009297 | |
| Piezo2 senses airway stretch and mediates lung inflation-induced apnoea. | Nonomura, Keiko; Woo, Seung-Hyun; Chang, Rui B; Gillich, Astrid; Qiu, Zhaozhu; Francisco, Allain G; Ranade, Sanjeev S; Liberles, Stephen D; Patapoutian, Ardem | Nature. | 2017 01 12; | 28002412 | |
| In vivo label-free photoacoustic flow cytography and on-the-spot laser killing of single circulating melanoma cells. | He, Yun; Wang, Lidai; Shi, Junhui; Yao, Junjie; Li, Lei; Zhang, Ruiying; Huang, Chih-Hsien; Zou, Jun; Wang, Lihong V | Scientific reports. | 2016 Dec 21; | 28000788 | |
| Prevalence and correlates of MRSA and MSSA nasal carriage at a Ugandan regional referral hospital. | Bebell, Lisa M; Ayebare, Arnold; Boum 2nd, Yap; Siedner, Mark J; Bazira, Joel; Schiff, Steven J; Metlay, Joshua P; Bangsberg, David R; Ttendo, Stephen; Firth, Paul G | The Journal of antimicrobial chemotherapy. | 2017 03 01; | 27999030 | |
| Rational Design of Small Molecules Targeting Oncogenic Noncoding RNAs from Sequence. | Disney, Matthew D; Angelbello, Alicia J | Accounts of chemical research. | 2016 Dec 20; | 27993012 | |
| Patterned photostimulation via visible-wavelength photonic probes for deep brain optogenetics. | Segev, Eran; Reimer, Jacob; Moreaux, Laurent C; Fowler, Trevor M; Chi, Derrick; Sacher, Wesley D; Lo, Maisie; Deisseroth, Karl; Tolias, Andreas S; Faraon, Andrei; Roukes, Michael L | Neurophotonics. | 2017 Jan; | 27990451 | |
| Adaptive Chromatin Remodeling Drives Glioblastoma Stem Cell Plasticity and Drug Tolerance. | Liau, Brian B; Sievers, Cem; Donohue, Laura K; Gillespie, Shawn M; Flavahan, William A; Miller, Tyler E; Venteicher, Andrew S; Hebert, Christine H; Carey, Christopher D; Rodig, Scott J; Shareef, Sarah J; Najm, Fadi J; van Galen, Peter; Wakimoto, Hiroaki; Cahill, Daniel P; Rich, Jeremy N; Aster, Jon C; Suvà, Mario L; Patel, Anoop P; Bernstein, Bradley E | Cell stem cell. | 2017 Feb 02; | 27989769 | |
| A Facile and Versatile Method to Endow Biomaterial Devices with Zwitterionic Surface Coatings. | Yesilyurt, Volkan; Veiseh, Omid; Doloff, Joshua C; Li, Jie; Bose, Suman; Xie, Xi; Bader, Andrew R; Chen, Michael; Webber, Matthew J; Vegas, Arturo J; Langer, Robert; Anderson, Daniel G | Advanced healthcare materials. | 2017 Feb; | 27976536 | |
| Capturing and Manipulating Activated Neuronal Ensembles with CANE Delineates a Hypothalamic Social-Fear Circuit. | Sakurai, Katsuyasu; Zhao, Shengli; Takatoh, Jun; Rodriguez, Erica; Lu, Jinghao; Leavitt, Andrew D; Fu, Min; Han, Bao-Xia; Wang, Fan | Neuron. | 2016 Nov 23; | 27974160 | |
| The Antiviral Mechanism of an Influenza A Virus Nucleoprotein-Specific Single-Domain Antibody Fragment. | Hanke, Leo; Knockenhauer, Kevin E; Brewer, R Camille; van Diest, Eline; Schmidt, Florian I; Schwartz, Thomas U; Ploegh, Hidde L | mBio. | 2016 12 13; | 27965447 | |
| Biochemical Characterization of a Eukaryotic Decalin-Forming Diels-Alderase. | Li, Li; Yu, Peiyuan; Tang, Man-Cheng; Zou, Yi; Gao, Shu-Shan; Hung, Yiu-Sun; Zhao, Muxun; Watanabe, Kenji; Houk, K N; Tang, Yi | Journal of the American Chemical Society. | 2016 Dec 14; | 27960349 | |
| Droplet Microfluidic Flow Cytometer For Sorting On Transient Cellular Responses Of Genetically-Encoded Sensors. | Fiedler, Brett L; Van Buskirk, Steven; Carter, Kyle P; Qin, Yan; Carpenter, Margaret C; Palmer, Amy E; Jimenez, Ralph | Analytical chemistry. | 2017 Jan 03; | 27959493 | |
| Influence of donor age on induced pluripotent stem cells. | Lo Sardo, Valentina; Ferguson, William; Erikson, Galina A; Topol, Eric J; Baldwin, Kristin K; Torkamani, Ali | Nature biotechnology. | 2017 Jan; | 27941802 | |
| Precise small-molecule recognition of a toxic CUG RNA repeat expansion. | Rzuczek, Suzanne G; Colgan, Lesley A; Nakai, Yoshio; Cameron, Michael D; Furling, Denis; Yasuda, Ryohei; Disney, Matthew D | Nature chemical biology. | 2017 Feb; | 27941760 | |
| New Transgenic Mouse Lines for Selectively Targeting Astrocytes and Studying Calcium Signals in Astrocyte Processes In Situ and In Vivo. | Srinivasan, Rahul; Lu, Tsai-Yi; Chai, Hua; Xu, Ji; Huang, Ben S; Golshani, Peyman; Coppola, Giovanni; Khakh, Baljit S | Neuron. | 2016 Dec 21; | 27939582 | |
| Gamma frequency entrainment attenuates amyloid load and modifies microglia. | Iaccarino, Hannah F; Singer, Annabelle C; Martorell, Anthony J; Rudenko, Andrii; Gao, Fan; Gillingham, Tyler Z; Mathys, Hansruedi; Seo, Jinsoo; Kritskiy, Oleg; Abdurrob, Fatema; Adaikkan, Chinnakkaruppan; Canter, Rebecca G; Rueda, Richard; Brown, Emery N; Boyden, Edward S; Tsai, Li-Huei | Nature. | 2016 12 07; | 27929004 | |
| Neurodegenerative disorders: Neural synchronization in Alzheimer's disease. | Aron, Liviu; Yankner, Bruce A | Nature. | 2016 12 07; | 27929001 | |
| Novel response patterns during repeated presentation of affective and neutral stimuli. | Satpute, Ajay B; Hanington, Lydia; Barrett, Lisa F | Social cognitive and affective neuroscience. | 2016 Dec; | 27928070 | |
| Multiplex gene editing by CRISPR-Cpf1 using a single crRNA array. | Zetsche, Bernd; Heidenreich, Matthias; Mohanraju, Prarthana; Fedorova, Iana; Kneppers, Jeroen; DeGennaro, Ellen M; Winblad, Nerges; Choudhury, Sourav R; Abudayyeh, Omar O; Gootenberg, Jonathan S; Wu, Wen Y; Scott, David A; Severinov, Konstantin; van der Oost, John; Zhang, Feng | Nature biotechnology. | 2017 Jan; | 27918548 | |
| Cortical Control of Spatial Resolution by VIP+ Interneurons. | Ayzenshtat, Inbal; Karnani, Mahesh Miikael; Jackson, Jesse; Yuste, Rafael | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Nov 09; | 27911754 | |
| Dry Age-Related Macular Degeneration Pharmacology. | Wright, Charles B; Ambati, Jayakrishna | Handbook of experimental pharmacology. | 2016 Nov 30; | 27900609 | |
| Combating Ebola with Repurposed Therapeutics Using the CANDO Platform. | Chopra, Gaurav; Kaushik, Sashank; Elkin, Peter L; Samudrala, Ram | Molecules (Basel, Switzerland). | 2016 Nov 25; | 27898018 | |
| Coupling immunity and programmed cell suicide in prokaryotes: Life-or-death choices. | Koonin, Eugene V; Zhang, Feng | BioEssays : news and reviews in molecular, cellular and developmental biology. | 2017 Jan; | 27896818 | |
| An Unexpected Regulatory Cascade Governs a Core Function of the Drosophila PRC1 Chromatin Protein Su(z)2. | Nguyen, Son C; Yu, Stephanie; Oberlick, Elaine; Wu, Chao-Ting | Genetics. | 2017 Feb; | 27881472 | |
| The past, present and future of ligament regenerative engineering. | Mengsteab, Paulos Y; Nair, Lakshmi S; Laurencin, Cato T | Regenerative medicine. | 2016 12; | 27879170 | |
| Discovery and biological characterization of potent myeloid cell leukemia-1 inhibitors. | Lee, Taekyu; Bian, Zhiguo; Zhao, Bin; Hogdal, Leah J; Sensintaffar, John L; Goodwin, Craig M; Belmar, Johannes; Shaw, Subrata; Tarr, James C; Veerasamy, Nagarathanam; Matulis, Shannon M; Koss, Brian; Fischer, Melissa A; Arnold, Allison L; Camper, DeMarco V; Browning, Carrie F; Rossanese, Olivia W; Budhraja, Amit; Opferman, Joseph; Boise, Lawrence H; Savona, Michael R; Letai, Anthony; Olejniczak, Edward T; Fesik, Stephen W | FEBS letters. | 2017 Jan; | 27878989 | |
| Cell culture-based profiling across mammals reveals DNA repair and metabolism as determinants of species longevity. | Ma, Siming; Upneja, Akhil; Galecki, Andrzej; Tsai, Yi-Miau; Burant, Charles F; Raskind, Sasha; Zhang, Quanwei; Zhang, Zhengdong D; Seluanov, Andrei; Gorbunova, Vera; Clish, Clary B; Miller, Richard A; Gladyshev, Vadim N | eLife. | 2016 Nov 22; | 27874830 | |
| A Critical and Comparative Review of Fluorescent Tools for Live-Cell Imaging. | Specht, Elizabeth A; Braselmann, Esther; Palmer, Amy E | Annual review of physiology. | 2017 02 10; | 27860833 | |
| The Lymphatic System: Integral Roles in Immunity. | Randolph, Gwendalyn J; Ivanov, Stoyan; Zinselmeyer, Bernd H; Scallan, Joshua P | Annual review of immunology. | 2017 Apr 26; | 27860528 | |
| Laser Particle Stimulated Emission Microscopy. | Cho, Sangyeon; Humar, Matja?; Martino, Nicola; Yun, Seok Hyun | Physical review letters. | 2016 Nov 04; | 27858427 | |
| Gifts and influence: Conflict of interest policies and prescribing of psychotropic medications in the United States. | King, Marissa; Bearman, Peter S | Social science & medicine (1982). | 2017 01; | 27856120 | |
| Evaluating Public Health Interventions: 5. Causal Inference in Public Health Research-Do Sex, Race, and Biological Factors Cause Health Outcomes? | Glymour, M Maria; Spiegelman, Donna | American journal of public health. | 2017 Jan; | 27854526 | |
| Light-based Approaches to Cardiac Arrhythmia Research: From Basic Science to Translational Applications. | Karathanos, Thomas V; Boyle, Patrick M; Trayanova, Natalia A | Clinical Medicine Insights. Cardiology. | 2016; | 27840581 | |
| Transcriptomic Profiling Maps Anatomically Patterned Subpopulations among Single Embryonic Cardiac Cells. | Li, Guang; Xu, Adele; Sim, Sopheak; Priest, James R; Tian, Xueying; Khan, Tooba; Quertermous, Thomas; Zhou, Bin; Tsao, Philip S; Quake, Stephen R; Wu, Sean M | Developmental cell. | ; | 27840109 | |
| Design and Construction of Generalizable RNA-Protein Hybrid Controllers by Level-Matched Genetic Signal Amplification. | Wang, Yen-Hsiang; McKeague, Maureen; Hsu, Tammy M; Smolke, Christina D | Cell systems. | ; | 27840078 | |
| Development of pharmacophore models for small molecules targeting RNA: Application to the RNA repeat expansion in myotonic dystrophy type 1. | Angelbello, Alicia J; González, Àlex L; Rzuczek, Suzanne G; Disney, Matthew D | Bioorganic & medicinal chemistry letters. | 2016 Dec 01; | 27839685 | |
| Pupil fluctuations track rapid changes in adrenergic and cholinergic activity in cortex. | Reimer, Jacob; McGinley, Matthew J; Liu, Yang; Rodenkirch, Charles; Wang, Qi; McCormick, David A; Tolias, Andreas S | Nature communications. | 2016 Nov 08; | 27824036 | |
| Generation of Immunity against Pathogens via Single-Domain Antibody-Antigen Constructs. | Duarte, Joao N; Cragnolini, Juan J; Swee, Lee Kim; Bilate, Angelina M; Bader, Justin; Ingram, Jessica R; Rashidfarrokhi, Ali; Fang, Tao; Schiepers, Ariën; Hanke, Leo; Ploegh, Hidde L | Journal of immunology (Baltimore, Md. : 1950). | 2016 12 15; | 27821668 | |
| Multidimensional chemical control of CRISPR-Cas9. | Maji, Basudeb; Moore, Christopher L; Zetsche, Bernd; Volz, Sara E; Zhang, Feng; Shoulders, Matthew D; Choudhary, Amit | Nature chemical biology. | 2017 Jan; | 27820801 | |
| Rapid capture and labeling of cells on single domain antibodies-functionalized flow cell. | Chen, Guan-Yu; Li, Zeyang; Duarte, Joao N; Esteban, Alexandre; Cheloha, Ross W; Theile, Christopher S; Fink, Gerald R; Ploegh, Hidde L | Biosensors & bioelectronics. | 2017 Mar 15; | 27816596 | |
| The Growing and Glowing Toolbox of Fluorescent and Photoactive Proteins. | Rodriguez, Erik A; Campbell, Robert E; Lin, John Y; Lin, Michael Z; Miyawaki, Atsushi; Palmer, Amy E; Shu, Xiaokun; Zhang, Jin; Tsien, Roger Y | Trends in biochemical sciences. | 2017 02; | 27814948 | |
| From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response. | Naumann, Eva A; Fitzgerald, James E; Dunn, Timothy W; Rihel, Jason; Sompolinsky, Haim; Engert, Florian | Cell. | 2016 Nov 3; | 27814522 | |
| Mechanisms of arrhythmogenesis related to calcium-driven alternans in a model of human atrial fibrillation. | Chang, Kelly C; Trayanova, Natalia A | Scientific reports. | 2016 Nov 04; | 27812021 | |
| Engineering and optimising deaminase fusions for genome editing. | Yang, Luhan; Briggs, Adrian W; Chew, Wei Leong; Mali, Prashant; Guell, Marc; Aach, John; Goodman, Daniel Bryan; Cox, David; Kan, Yinan; Lesha, Emal; Soundararajan, Venkataramanan; Zhang, Feng; Church, George | Nature communications. | 2016 Nov 02; | 27804970 | |
| Fluorescent indicators for simultaneous reporting of all four cell cycle phases. | Bajar, Bryce T; Lam, Amy J; Badiee, Ryan K; Oh, Young-Hee; Chu, Jun; Zhou, Xin X; Kim, Namdoo; Kim, Benjamin B; Chung, Mingyu; Yablonovitch, Arielle L; Cruz, Barney F; Kulalert, Kanokwan; Tao, Jacqueline J; Meyer, Tobias; Su, Xiao-Dong; Lin, Michael Z | Nature methods. | 2016 Dec; | 27798610 | |
| Simultaneous dual-color fluorescence lifetime imaging with novel red-shifted fluorescent proteins. | Laviv, Tal; Kim, Benjamin B; Chu, Jun; Lam, Amy J; Lin, Michael Z; Yasuda, Ryohei | Nature methods. | 2016 Dec; | 27798609 | |
| A Disease or Not a Disease? Aging As a Pathology. | Gladyshev, Timothy V; Gladyshev, Vadim N | Trends in molecular medicine. | 2016 Dec; | 27793599 | |
| The capillary bed offers the largest hemodynamic resistance to the cortical blood supply. | Gould, Ian Gopal; Tsai, Philbert; Kleinfeld, David; Linninger, Andreas | Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism. | 2017 Jan; | 27780904 | |
| Use of a single xenon flash lamp for photoacoustic computed tomography of multiple-centimeter-thick biological tissue ex vivo and a whole mouse body in vivo. | Wong, Terence T W; Zhou, Yong; Garcia-Uribe, Alejandro; Li, Lei; Maslov, Konstantin; Lin, Li; Wang, Lihong V | Journal of biomedical optics. | 2017 Apr 01; | 27775747 | |
| Handheld optical-resolution photoacoustic microscopy. | Lin, Li; Zhang, Pengfei; Xu, Song; Shi, Junhui; Li, Lei; Yao, Junjie; Wang, Lidai; Zou, Jun; Wang, Lihong V | Journal of biomedical optics. | 2017 Apr 01; | 27775746 | |
| Nanofabricated Neural Probes for Dense 3-D Recordings of Brain Activity. | Rios, Gustavo; Lubenov, Evgueniy V; Chi, Derrick; Roukes, Michael L; Siapas, Athanassios G | Nano letters. | 2016 Oct 21; | 27766885 | |
| Intra-Cluster Correlation Estimates for HIV-related Outcomes from Care and Treatment Clinics in Dar es Salaam, Tanzania. | Barnhart, Dale; Hertzmark, Ellen; Liu, Enju; Mungure, Ester; Muya, Aisa N; Sando, David; Chalamilla, Guerino; Ulenga, Nzovu; Bärnighausen, Till; Fawzi, Wafaie; Spiegelman, Donna | Contemporary clinical trials communications. | 2016 Dec 15; | 27766318 | |
| Evaluation of Dose and Safety of AAV7m8 and AAV8BP2 in the Non-Human Primate Retina. | Ramachandran, Pavitra S; Lee, Vivian; Wei, Zhangyong; Song, Ji Yun; Casal, Giulia; Cronin, Therese; Willett, Keirnan; Huckfeldt, Rachel; Morgan, Jessica I W; Aleman, Tomas S; Maguire, Albert M; Bennett, Jean | Human gene therapy. | 2017 Feb; | 27750461 | |
| Structural basis of nonribosomal peptide macrocyclization in fungi. | Zhang, Jinru; Liu, Nicholas; Cacho, Ralph A; Gong, Zhou; Liu, Zhu; Qin, Wenming; Tang, Chun; Tang, Yi; Zhou, Jiahai | Nature chemical biology. | 2016 Oct 17; | 27748753 | |
| Lymphoid Aggregates Remodel Lymphatic Collecting Vessels that Serve Mesenteric Lymph Nodes in Crohn Disease. | Randolph, Gwendalyn J; Bala, Shashi; Rahier, Jean-François; Johnson, Michael W; Wang, Peter L; Nalbantoglu, ILKe; Dubuquoy, Laurent; Chau, Amélie; Pariente, Benjamin; Kartheuser, Alex; Zinselmeyer, Bernd H; Colombel, Jean-Frederic | The American journal of pathology. | 2016 Dec; | 27746181 | |
| Cryo-EM Structure of Caspase-8 Tandem DED Filament Reveals Assembly and Regulation Mechanisms of the Death-Inducing Signaling Complex. | Fu, Tian-Min; Li, Yang; Lu, Alvin; Li, Zongli; Vajjhala, Parimala R; Cruz, Anthony C; Srivastava, Devendra B; DiMaio, Frank; Penczek, Pawel A; Siegel, Richard M; Stacey, Katryn J; Egelman, Edward H; Wu, Hao | Molecular cell. | 2016 Oct 20; | 27746017 | |
| Nanoparticle-based drug delivery systems: a commercial and regulatory outlook as the field matures. | Ragelle, Héloïse; Danhier, Fabienne; Préat, Véronique; Langer, Robert; Anderson, Daniel G | Expert opinion on drug delivery. | 2016 Oct 14; | 27730820 | |
| Drug sensitivity of single cancer cells is predicted by changes in mass accumulation rate. | Stevens, Mark M; Maire, Cecile L; Chou, Nigel; Murakami, Mark A; Knoff, David S; Kikuchi, Yuki; Kimmerling, Robert J; Liu, Huiyun; Haidar, Samer; Calistri, Nicholas L; Cermak, Nathan; Olcum, Selim; Cordero, Nicolas A; Idbaih, Ahmed; Wen, Patrick Y; Weinstock, David M; Ligon, Keith L; Manalis, Scott R | Nature biotechnology. | 2016 Nov; | 27723727 | |
| High-resolution interrogation of functional elements in the noncoding genome. | Sanjana, Neville E; Wright, Jason; Zheng, Kaijie; Shalem, Ophir; Fontanillas, Pierre; Joung, Julia; Cheng, Christine; Regev, Aviv; Zhang, Feng | Science (New York, N.Y.). | 2016 Sep 30; | 27708104 | |
| Orientation Tuning Depends on Spatial Frequency in Mouse Visual Cortex. | Ayzenshtat, Inbal; Jackson, Jesse; Yuste, Rafael | eNeuro. | 2016 Sep-Oct; | 27699210 | |
| Biosynthesis of Strained Piperazine Alkaloids - Uncovering the Concise Pathway of Herquline A. | Yu, Xia; Liu, Fang; Zou, Yi; Tang, Man-Cheng; Hang, Leibniz; Houk, Kendall N; Tang, Yi | Journal of the American Chemical Society. | 2016 Oct 3; | 27690412 | |
| Mapping 3D genome architecture through in situ DNase Hi-C. | Ramani, Vijay; Cusanovich, Darren A; Hause, Ronald J; Ma, Wenxiu; Qiu, Ruolan; Deng, Xinxian; Blau, C Anthony; Disteche, Christine M; Noble, William S; Shendure, Jay; Duan, Zhijun | Nature protocols. | 2016 Nov; | 27685100 | |
| Early somatic mosaicism is a rare cause of long-QT syndrome. | Priest, James Rush; Gawad, Charles; Kahlig, Kristopher M; Yu, Joseph K; O'Hara, Thomas; Boyle, Patrick M; Rajamani, Sridharan; Clark, Michael J; Garcia, Sarah T K; Ceresnak, Scott; Harris, Jason; Boyle, Sean; Dewey, Frederick E; Malloy-Walton, Lindsey; Dunn, Kyla; Grove, Megan; Perez, Marco V; Neff, Norma F; Chen, Richard; Maeda, Katsuhide; Dubin, Anne; Belardinelli, Luiz; West, John; Antolik, Christian; Macaya, Daniela; Quertermous, Thomas; Trayanova, Natalia A; Quake, Stephen R; Ashley, Euan A | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Oct 11; | 27681629 | |
| Autocrine BDNF-TrkB signalling within a single dendritic spine. | Harward, Stephen C; Hedrick, Nathan G; Hall, Charles E; Parra-Bueno, Paula; Milner, Teresa A; Pan, Enhui; Laviv, Tal; Hempstead, Barbara L; Yasuda, Ryohei; McNamara, James O | Nature. | 2016 Oct 06; | 27680698 | |
| Rho GTPase complementation underlies BDNF-dependent homo- and heterosynaptic plasticity. | Hedrick, Nathan G; Harward, Stephen C; Hall, Charles E; Murakoshi, Hideji; McNamara, James O; Yasuda, Ryohei | Nature. | 2016 Oct 06; | 27680697 | |
| Global tRNA misacylation induced by anaerobiosis and antibiotic exposure broadly increases stress resistance in Escherichia coli. | Schwartz, Michael H; Waldbauer, Jacob R; Zhang, Lichun; Pan, Tao | Nucleic acids research. | 2016 Dec 01; | 27672035 | |
| An inducible long noncoding RNA amplifies DNA damage signaling. | Schmitt, Adam M; Garcia, Julia T; Hung, Tiffany; Flynn, Ryan A; Shen, Ying; Qu, Kun; Payumo, Alexander Y; Peres-da-Silva, Ashwin; Broz, Daniela Kenzelmann; Baum, Rachel; Guo, Shuling; Chen, James K; Attardi, Laura D; Chang, Howard Y | Nature genetics. | 2016 Nov; | 27668660 | |
| Human Serum Albumin Domain I Fusion Protein for Antibody Conjugation. | Patterson, James T; Wilson, Henry D; Asano, Shigehiro; Nilchan, Napon; Fuller, Roberta P; Roush, William R; Rader, Christoph; Barbas 3rd, Carlos F | Bioconjugate chemistry. | 2016 10 19; | 27666414 | |
| Gene Therapy and Stem Cell Transplantation in Retinal Disease: The New Frontier. | MacLaren, Robert E; Bennett, Jean; Schwartz, Steven D | Ophthalmology. | 2016 Oct; | 27664291 | |
| Basal Forebrain Cholinergic Circuits and Signaling in Cognition and Cognitive Decline. | Ballinger, Elizabeth C; Ananth, Mala; Talmage, David A; Role, Lorna W | Neuron. | 2016 Sep 21; | 27657448 | |
| Distinct combinations of variant ionotropic glutamate receptors mediate thermosensation and hygrosensation in Drosophila. | Knecht, Zachary A; Silbering, Ana F; Ni, Lina; Klein, Mason; Budelli, Gonzalo; Bell, Rati; Abuin, Liliane; Ferrer, Anggie J; Samuel, Aravinthan Dt; Benton, Richard; Garrity, Paul A | eLife. | 2016 09 22; | 27656904 | |
| Rooted in risk: genetic predisposition for low-density lipoprotein cholesterol level associates with diminished low-density lipoprotein cholesterol response to statin treatment. | Smit, Roelof Aj; Postmus, Iris; Trompet, Stella; Barnes, Michael R; Warren, Helen; Arsenault, Benoit J; Chasman, Daniel I; Cupples, L Adrienne; Hitman, Graham A; Krauss, Ronald M; Li, Xiaohui; Psaty, Bruce M; Stein, Charles M; Rotter, Jerome I; Jukema, J Wouter | Pharmacogenomics. | 2016 Oct; | 27648687 | |
| iPSC-derived cardiomyocytes reveal abnormal TGF-? signalling in left ventricular non-compaction cardiomyopathy. | Kodo, Kazuki; Ong, Sang-Ging; Jahanbani, Fereshteh; Termglinchan, Vittavat; Hirono, Keiichi; InanlooRahatloo, Kolsoum; Ebert, Antje D; Shukla, Praveen; Abilez, Oscar J; Churko, Jared M; Karakikes, Ioannis; Jung, Gwanghyun; Ichida, Fukiko; Wu, Sean M; Snyder, Michael P; Bernstein, Daniel; Wu, Joseph C | Nature cell biology. | 2016 Oct; | 27642787 | |
| Regulation of X-linked gene expression during early mouse development by Rlim. | Wang, Feng; Shin, JongDae; Shea, Jeremy M; Yu, Jun; Bo?kovi?, Ana; Byron, Meg; Zhu, Xiaochun; Shalek, Alex K; Regev, Aviv; Lawrence, Jeanne B; Torres, Eduardo M; Zhu, Lihua J; Rando, Oliver J; Bach, Ingolf | eLife. | 2016 Sep 19; | 27642011 | |
| Determining the fidelity of tRNA aminoacylation via microarrays. | Schwartz, Michael H; Pan, Tao | Methods (San Diego, Calif.). | 2016 Sep 14; | 27639882 | |
| Hybridized wavefront shaping for high-speed, high-efficiency focusing through dynamic diffusive media. | Hemphill, Ashton S; Tay, Jian Wei; Wang, Lihong V | Journal of biomedical optics. | 2016 Dec 01; | 27626770 | |
| Evolutionary Gain of Alanine Mischarging to Noncognate tRNAs with a G4:U69 Base Pair. | Sun, Litao; Gomes, Ana Cristina; He, Weiwei; Zhou, Huihao; Wang, Xiaoyun; Pan, David W; Schimmel, Paul; Pan, Tao; Yang, Xiang-Lei | Journal of the American Chemical Society. | 2016 Oct 05; | 27622773 | |
| Optogenetic defibrillation terminates ventricular arrhythmia in mouse hearts and human simulations. | Bruegmann, Tobias; Boyle, Patrick M; Vogt, Christoph C; Karathanos, Thomas V; Arevalo, Hermenegild J; Fleischmann, Bernd K; Trayanova, Natalia A; Sasse, Philipp | The Journal of clinical investigation. | 2016 Oct 03; | 27617859 | |
| tRNA base methylation identification and quantification via high-throughput sequencing. | Clark, Wesley C; Evans, Molly E; Dominissini, Dan; Zheng, Guanqun; Pan, Tao | RNA (New York, N.Y.). | 2016 Nov; | 27613580 | |
| Codon optimality controls differential mRNA translation during amino acid starvation. | Saikia, Mridusmita; Wang, Xiaoyun; Mao, Yuanhui; Wan, Ji; Pan, Tao; Qian, Shu-Bing | RNA (New York, N.Y.). | 2016 Nov; | 27613579 | |
| High-throughput measurement of single-cell growth rates using serial microfluidic mass sensor arrays. | Cermak, Nathan; Olcum, Selim; Delgado, Francisco Feijó; Wasserman, Steven C; Payer, Kristofor R; A Murakami, Mark; Knudsen, Scott M; Kimmerling, Robert J; Stevens, Mark M; Kikuchi, Yuki; Sandikci, Arzu; Ogawa, Masaaki; Agache, Vincent; Baléras, François; Weinstock, David M; Manalis, Scott R | Nature biotechnology. | 2016 Oct; | 27598230 | |
| Properties of the Visible Light Phototaxis and UV Avoidance Behaviors in the Larval Zebrafish. | Guggiana-Nilo, Drago A; Engert, Florian | Frontiers in behavioral neuroscience. | 2016; | 27594828 | |
| Institutional Conflict of Interest. | Bennett, Jean | JAMA ophthalmology. | 2016 Nov 01; | 27583791 | |
| Comparison of Modular PEG Incorporation Strategies for Stabilization of Peptide-siRNA Nanocomplexes. | Lo, Justin H; Kwon, Ester J; Zhang, Angela Q; Singhal, Preeti; Bhatia, Sangeeta N | Bioconjugate chemistry. | 2016 10 19; | 27583545 | |
| Parent-of-origin effects of A1CF and AGO2 on testicular germ-cell tumors, testicular abnormalities, and fertilization bias. | Carouge, Delphine; Blanc, Valerie; Knoblaugh, Sue E; Hunter, Robert J; Davidson, Nicholas O; Nadeau, Joseph H | Proceedings of the National Academy of Sciences of the United States of America. | 2016 09 13; | 27582469 | |
| Techniques for measuring cellular zinc. | Carpenter, Margaret C; Lo, Maria N; Palmer, Amy E | Archives of biochemistry and biophysics. | 2016 Aug 28; | 27580940 | |
| The roadmap for estimation of cell-type-specific neuronal activity from non-invasive measurements. | Uhlirova, Hana; K?l?ç, K?v?lc?m; Tian, Peifang; Sakad?i?, Sava; Gagnon, Louis; Thunemann, Martin; Desjardins, Michèle; Saisan, Payam A; Nizar, Krystal; Yaseen, Mohammad A; Hagler Jr, Donald J; Vandenberghe, Matthieu; Djurovic, Srdjan; Andreassen, Ole A; Silva, Gabriel A; Masliah, Eliezer; Kleinfeld, David; Vinogradov, Sergei; Buxton, Richard B; Einevoll, Gaute T; Boas, David A; Dale, Anders M; Devor, Anna | Philosophical transactions of the Royal Society of London. Series B, Biological sciences. | 2016 Oct 05; | 27574309 | |
| Precision mapping of the vibrissa representation within murine primary somatosensory cortex. | Knutsen, Per M; Mateo, Celine; Kleinfeld, David | Philosophical transactions of the Royal Society of London. Series B, Biological sciences. | 2016 Oct 05; | 27574305 | |
| Phenotypic lentivirus screens to identify functional single domain antibodies. | Schmidt, Florian I; Hanke, Leo; Morin, Benjamin; Brewer, Rebeccah; Brusic, Vesna; Whelan, Sean P J; Ploegh, Hidde L | Nature microbiology. | 2016; | 27573105 | |
| Microdomain-Specific Modulation of L-Type Calcium Channels Leads to Triggered Ventricular Arrhythmia in Heart Failure. | Sanchez-Alonso, Jose L; Bhargava, Anamika; O'Hara, Thomas; Glukhov, Alexey V; Schobesberger, Sophie; Bhogal, Navneet; Sikkel, Markus B; Mansfield, Catherine; Korchev, Yuri E; Lyon, Alexander R; Punjabi, Prakash P; Nikolaev, Viacheslav O; Trayanova, Natalia A; Gorelik, Julia | Circulation research. | 2016 Sep 30; | 27572487 | |
| Genetically encoded indicators of neuronal activity. | Lin, Michael Z; Schnitzer, Mark J | Nature neuroscience. | 2016 Aug 26; | 27571193 | |
| Opportunities and challenges in modeling human brain disorders in transgenic primates. | Jennings, Charles G; Landman, Rogier; Zhou, Yang; Sharma, Jitendra; Hyman, Julia; Movshon, J Anthony; Qiu, Zilong; Roberts, Angela C; Roe, Anna Wang; Wang, Xiaoqin; Zhou, Huihui; Wang, Liping; Zhang, Feng; Desimone, Robert; Feng, Guoping | Nature neuroscience. | 2016 Aug 26; | 27571191 | |
| Posttranscriptional Regulation of Glycoprotein Quality Control in the Endoplasmic Reticulum Is Controlled by the E2 Ub-Conjugating Enzyme UBC6e. | Hagiwara, Masatoshi; Ling, Jingjing; Koenig, Paul-Albert; Ploegh, Hidde L | Molecular cell. | 2016 Sep 1; | 27570074 | |
| Development of Light-Activated CRISPR Using Guide RNAs with Photocleavable Protectors. | Jain, Piyush K; Ramanan, Vyas; Schepers, Arnout G; Dalvie, Nisha S; Panda, Apekshya; Fleming, Heather E; Bhatia, Sangeeta N | Angewandte Chemie (International ed. in English). | 2016 Sep 26; | 27554600 | |
| MHC II+ resident peritoneal and pleural macrophages rely on IRF4 for development from circulating monocytes. | Kim, Ki-Wook; Williams, Jesse W; Wang, Ya-Ting; Ivanov, Stoyan; Gilfillan, Susan; Colonna, Marco; Virgin, Herbert W; Gautier, Emmanuel L; Randolph, Gwendalyn J | The Journal of experimental medicine. | 2016 Sep 19; | 27551152 | |
| Association of left atrial epicardial adipose tissue with electrogram bipolar voltage and fractionation: Electrophysiologic substrates for atrial fibrillation. | Zghaib, Tarek; Ipek, Esra Gucuk; Zahid, Sohail; Balouch, Muhammad Adnan; Misra, Satish; Ashikaga, Hiroshi; Berger, Ronald D; Marine, Joseph E; Spragg, David D; Zimmerman, Stefan L; Zipunnikov, Vadim; Trayanova, Natalia; Calkins, Hugh; Nazarian, Saman | Heart rhythm. | 2016 Dec; | 27546816 | |
| Intrinsic Versus Extrinsic Cancer Risk Factors and Aging. | Podolskiy, Dmitriy I; Gladyshev, Vadim N | Trends in molecular medicine. | 2016 Aug 17; | 27544777 | |
| Investigating the Interplay between Sister Chromatid Cohesion and Homolog Pairing in Drosophila Nuclei. | Senaratne, T Niroshini; Joyce, Eric F; Nguyen, Son C; Wu, C-Ting | PLoS genetics. | 2016 Aug; | 27541002 | |
| Focusing light through biological tissue and tissue-mimicking phantoms up to 9.6 cm in thickness with digital optical phase conjugation. | Shen, Yuecheng; Liu, Yan; Ma, Cheng; Wang, Lihong V | Journal of biomedical optics. | 2016 Aug 1; | 27533439 | |
| A Link between Integral Membrane Protein Expression and Simulated Integration Efficiency. | Marshall, Stephen S; Niesen, Michiel J M; Müller, Axel; Tiemann, Katrin; Saladi, Shyam M; Galimidi, Rachel P; Zhang, Bin; Clemons Jr, William M; Miller 3rd, Thomas F | Cell reports. | 2016 Aug 23; | 27524616 | |
| Early-life seizures alter synaptic calcium-permeable AMPA receptor function and plasticity. | Lippman-Bell, Jocelyn J; Zhou, Chengwen; Sun, Hongyu; Feske, Joel S; Jensen, Frances E | Molecular and cellular neurosciences. | 2016 Oct; | 27521497 | |
| Engineering a microbial platform for de novo biosynthesis of diverse methylxanthines. | McKeague, Maureen; Wang, Yen-Hsiang; Cravens, Aaron; Win, Maung Nyan; Smolke, Christina D | Metabolic engineering. | 2016 Aug 9; | 27519552 | |
| Imprinting and recalling cortical ensembles. | Carrillo-Reid, Luis; Yang, Weijian; Bando, Yuki; Peterka, Darcy S; Yuste, Rafael | Science (New York, N.Y.). | 2016 Aug 12; | 27516599 | |
| Analysis of cancer genomes reveals basic features of human aging and its role in cancer development. | Podolskiy, Dmitriy I; Lobanov, Alexei V; Kryukov, Gregory V; Gladyshev, Vadim N | Nature communications. | 2016 Aug 12; | 27515585 | |
| Evaluating Public Health Interventions: 4. The Nurses' Health Study and Methods for Eliminating Bias Attributable to Measurement Error and Misclassification. | Spiegelman, Donna | American journal of public health. | 2016 Sep; | 27509282 | |
| Neuromodulation of Courtship Drive through Tyramine-Responsive Neurons in the Drosophila Brain. | Huang, Jia; Liu, Weiwei; Qi, Yi-Xiang; Luo, Junjie; Montell, Craig | Current biology : CB. | 2016 Aug 3; | 27498566 | |
| Lock-in camera based heterodyne holography for ultrasound-modulated optical tomography inside dynamic scattering media. | Liu, Yan; Shen, Yuecheng; Ma, Cheng; Shi, Junhui; Wang, Lihong V | Applied physics letters. | 2016 Jun 6; | 27493275 | |
| Structures of TorsinA and its disease-mutant complexed with an activator reveal the molecular basis for primary dystonia. | Demircioglu, F Esra; Sosa, Brian A; Ingram, Jessica; Ploegh, Hidde L; Schwartz, Thomas U | eLife. | 2016 08 04; | 27490483 | |
| Spatial tuning and brain state account for dorsal hippocampal CA1 activity in a non-spatial learning task. | Shan, Kevin Q; Lubenov, Evgueniy V; Papadopoulou, Maria; Siapas, Athanassios G | eLife. | 2016 08 03; | 27487561 | |
| Spatial Control of Gene Expression by Nanocarriers Using Heparin Masking and Ultrasound-Targeted Microbubble Destruction. | Chertok, Beata; Langer, Robert; Anderson, Daniel G | ACS nano. | 2016 Aug 23; | 27472268 | |
| Div-Seq: Single-nucleus RNA-Seq reveals dynamics of rare adult newborn neurons. | Habib, Naomi; Li, Yinqing; Heidenreich, Matthias; Swiech, Lukasz; Avraham-Davidi, Inbal; Trombetta, John J; Hession, Cynthia; Zhang, Feng; Regev, Aviv | Science (New York, N.Y.). | 2016 08 26; | 27471252 | |
| Structure-guided wavelength tuning in far-red fluorescent proteins. | Ng, Ho-Leung; Lin, Michael Z | Current opinion in structural biology. | 2016 Aug; | 27468111 | |
| A practical guide to photoacoustic tomography in the life sciences. | Wang, Lihong V; Yao, Junjie | Nature methods. | 2016 Jul 28; | 27467726 | |
| Spatial organization of chromatin domains and compartments in single chromosomes. | Wang, Siyuan; Su, Jun-Han; Beliveau, Brian J; Bintu, Bogdan; Moffitt, Jeffrey R; Wu, Chao-ting; Zhuang, Xiaowei | Science (New York, N.Y.). | 2016 Aug 05; | 27445307 | |
| Synchronized cycles of bacterial lysis for in vivo delivery. | Din, M Omar; Danino, Tal; Prindle, Arthur; Skalak, Matt; Selimkhanov, Jangir; Allen, Kaitlin; Julio, Ellixis; Atolia, Eta; Tsimring, Lev S; Bhatia, Sangeeta N; Hasty, Jeff | Nature. | 2016 08 04; | 27437587 | |
| Napoleon Is in Equilibrium. | Phillips, Rob | Annual review of condensed matter physics. | 2015 Mar; | 27429713 | |
| A Revised Hemodynamic Theory of Age-Related Macular Degeneration. | Gelfand, Bradley D; Ambati, Jayakrishna | Trends in molecular medicine. | 2016 Jul 13; | 27423265 | |
| The Troubled Touch of Autism. | Tuttle, Alexander H; Bartsch, Victoria B; Zylka, Mark J | Cell. | 2016 Jul 14; | 27419865 | |
| Somatostatin Interneurons Control a Key Component of Mismatch Negativity in Mouse Visual Cortex. | Hamm, Jordan P; Yuste, Rafael | Cell reports. | 2016 Jul 19; | 27396334 | |
| Differential Multiphoton Laser Scanning Microscopy. | Field, Jeffrey J; Sheetz, Kraig E; Chandler, Eric V; Hoover, Erich E; Young, Michael D; Ding, Shi-You; Sylvester, Anne W; Kleinfeld, David; Squier, Jeff A | IEEE journal of selected topics in quantum electronics : a publication of the IEEE Lasers and Electro-optics Society. | 2012 Jan-Feb; | 27390511 | |
| Inflammasome-activated gasdermin D causes pyroptosis by forming membrane pores. | Liu, Xing; Zhang, Zhibin; Ruan, Jianbin; Pan, Youdong; Magupalli, Venkat Giri; Wu, Hao; Lieberman, Judy | Nature. | 2016 07 07; | 27383986 | |
| Separating Putative Pathogens from Background Contamination with Principal Orthogonal Decomposition: Evidence for Leptospira in the Ugandan Neonatal Septisome. | Schiff, Steven J; Kiwanuka, Julius; Riggio, Gina; Nguyen, Lan; Mu, Kevin; Sproul, Emily; Bazira, Joel; Mwanga-Amumpaire, Juliet; Tumusiime, Dickson; Nyesigire, Eunice; Lwanga, Nkangi; Bogale, Kaleb T; Kapur, Vivek; Broach, James R; Morton, Sarah U; Warf, Benjamin C; Poss, Mary | Frontiers in medicine. | 2016; | 27379237 | |
| Engineering biosynthesis of the anticancer alkaloid noscapine in yeast. | Li, Yanran; Smolke, Christina D | Nature communications. | 2016 Jul 05; | 27378283 | |
| Nanoscale imaging of RNA with expansion microscopy. | Chen, Fei; Wassie, Asmamaw T; Cote, Allison J; Sinha, Anubhav; Alon, Shahar; Asano, Shoh; Daugharthy, Evan R; Chang, Jae-Byum; Marblestone, Adam; Church, George M; Raj, Arjun; Boyden, Edward S | Nature methods. | 2016 Aug; | 27376770 | |
| Tbx16 regulates hox gene activation in mesodermal progenitor cells. | Payumo, Alexander Y; McQuade, Lindsey E; Walker, Whitney J; Yamazoe, Sayumi; Chen, James K | Nature chemical biology. | 2016 09; | 27376691 | |
| Protein-retention expansion microscopy of cells and tissues labeled using standard fluorescent proteins and antibodies. | Tillberg, Paul W; Chen, Fei; Piatkevich, Kiryl D; Zhao, Yongxin; Yu, Chih-Chieh Jay; English, Brian P; Gao, Linyi; Martorell, Anthony; Suk, Ho-Jun; Yoshida, Fumiaki; DeGennaro, Ellen M; Roossien, Douglas H; Gong, Guanyu; Seneviratne, Uthpala; Tannenbaum, | Nature biotechnology. | 2016 Jul 4; | 27376584 | |
| Safety and durability of effect of contralateral-eye administration of AAV2 gene therapy in patients with childhood-onset blindness caused by RPE65 mutations: a follow-on phase 1 trial. | Bennett, Jean; Wellman, Jennifer; Marshall, Kathleen A; McCague, Sarah; Ashtari, Manzar; DiStefano-Pappas, Julie; Elci, Okan U; Chung, Daniel C; Sun, Junwei; Wright, J Fraser; Cross, Dominique R; Aravand, Puya; Cyckowski, Laura L; Bennicelli, Jeannette L; Mingozzi, Federico; Auricchio, Alberto; Pierce, Eric A; Ruggiero, Jason; Leroy, Bart P; Simonelli, Francesca; High, Katherine A; Maguire, Albert M | Lancet (London, England). | 2016 Aug 13; | 27375040 | |
| Sorting Out Presenilins in Alzheimer's Disease. | Wolfe, Michael S; Yankner, Bruce A | Cell. | 2016 Jun 30; | 27368096 | |
| Putting gold nanocages to work for optical imaging, controlled release and cancer theranostics. | Pang, Bo; Yang, Xuan; Xia, Younan | Nanomedicine (London, England). | 2016 07; | 27348546 | |
| Three-dimensional mapping and regulation of action potential propagation in nanoelectronics-innervated tissues. | Dai, Xiaochuan; Zhou, Wei; Gao, Teng; Liu, Jia; Lieber, Charles M | Nature nanotechnology. | 2016 Sep; | 27347837 | |
| Genome-wide specificities of CRISPR-Cas Cpf1 nucleases in human cells. | Kleinstiver, Benjamin P; Tsai, Shengdar Q; Prew, Michelle S; Nguyen, Nhu T; Welch, Moira M; Lopez, Jose M; McCaw, Zachary R; Aryee, Martin J; Joung, J Keith | Nature biotechnology. | 2016 08; | 27347757 | |
| Mapping RNA-RNA interactome and RNA structure in vivo by MARIO. | Nguyen, Tri C; Cao, Xiaoyi; Yu, Pengfei; Xiao, Shu; Lu, Jia; Biase, Fernando H; Sridhar, Bharat; Huang, Norman; Zhang, Kang; Zhong, Sheng | Nature communications. | 2016 Jun 24; | 27338251 | |
| Computational rabbit models to investigate the initiation, perpetuation, and termination of ventricular arrhythmia. | Arevalo, Hermenegild J; Boyle, Patrick M; Trayanova, Natalia A | Progress in biophysics and molecular biology. | 2016 Jul; | 27334789 | |
| Integrated genetic and pharmacologic interrogation of rare cancers. | Hong, Andrew L; Tseng, Yuen-Yi; Cowley, Glenn S; Jonas, Oliver; Cheah, Jaime H; Kynnap, Bryan D; Doshi, Mihir B; Oh, Coyin; Meyer, Stephanie C; Church, Alanna J; Gill, Shubhroz; Bielski, Craig M; Keskula, Paula; Imamovic, Alma; Howell, Sara; Kryukov, Gregory V; Clemons, Paul A; Tsherniak, Aviad; Vazquez, Francisca; Crompton, Brian D; Shamji, Alykhan F; Rodriguez-Galindo, Carlos; Janeway, Katherine A; Roberts, Charles W M; Stegmaier, Kimberly; van Hummelen, Paul; Cima, Michael J; Langer, Robert S; Garraway, Levi A; Schreiber, Stuart L; Root, David E; Hahn, William C; Boehm, Jesse S | Nature communications. | 2016 Jun 22; | 27329820 | |
| First In Vivo Testing of Compounds Targeting Group 3 Medulloblastomas Using an Implantable Microdevice as a New Paradigm for Drug Development. | Jonas, Oliver; Calligaris, David; Methuku, Kashi Reddy; Poe, Michael M; Francois, Jessica Pierre; Tranghese, Frank; Changelian, Armen; Sieghart, Werner; Ernst, Margot; Krummel, Daniel A Pomeranz; Cook, James M; Pomeroy, Scott L; Cima, Michael; Agar, Nathalie Y R; Langer, Robert; Sengupta, Soma | Journal of biomedical nanotechnology. | 2016 Jun; | 27319222 | |
| Interaction of tRNA with MEK2 in pancreatic cancer cells. | Wang, Xiaoyun; Chow, Christina R; Ebine, Kazumi; Lee, Jiyoung; Rosner, Marsha R; Pan, Tao; Munshi, Hidayatullah G | Scientific reports. | 2016 Jun 15; | 27301426 | |
| Establishing the situated features associated with perceived stress. | Lebois, Lauren A M; Hertzog, Christopher; Slavich, George M; Barrett, Lisa Feldman; Barsalou, Lawrence W | Acta psychologica. | 2016 Sep; | 27288834 | |
| Evaluating Public Health Interventions: 3. The Two-Stage Design for Confounding Bias Reduction-Having Your Cake and Eating It Two. | Spiegelman, Donna; Rivera-Rodriguez, Claudia L; Haneuse, Sebastien | American journal of public health. | 2016 Jul; | 27285260 | |
| Distilling complexity to advance cardiac tissue engineering. | Ogle, Brenda M; Bursac, Nenad; Domian, Ibrahim; Huang, Ngan F; Menasché, Philippe; Murry, Charles E; Pruitt, Beth; Radisic, Milica; Wu, Joseph C; Wu, Sean M; Zhang, Jianyi; Zimmermann, Wolfram-Hubertus; Vunjak-Novakovic, Gordana | Science translational medicine. | 2016 Jun 8; | 27280684 | |
| Small Molecule Recognition and Tools to Study Modulation of r(CGG)(exp) in Fragile X-Associated Tremor Ataxia Syndrome. | Yang, Wang-Yong; He, Fang; Strack, Rita L; Oh, Seok Yoon; Frazer, Michelle; Jaffrey, Samie R; Todd, Peter K; Disney, Matthew D | ACS chemical biology. | 2016 Sep 16; | 27276216 | |
| Grueneisen relaxation photoacoustic microscopy in vivo. | Ma, Jun; Shi, Junhui; Hai, Pengfei; Zhou, Yong; Wang, Lihong V | Journal of biomedical optics. | 2016 Jun 1; | 27272096 | |
| Glutathione peroxidase 4 and vitamin E cooperatively prevent hepatocellular degeneration. | Carlson, Bradley A; Tobe, Ryuta; Yefremova, Elena; Tsuji, Petra A; Hoffmann, Victoria J; Schweizer, Ulrich; Gladyshev, Vadim N; Hatfield, Dolph L; Conrad, Marcus | Redox biology. | 2016 Oct; | 27262435 | |
| Towards Consensus Gene Ages. | Liebeskind, Benjamin J; McWhite, Claire D; Marcotte, Edward M | Genome biology and evolution. | 2016; | 27259914 | |
| The Aging Epigenome. | Booth, Lauren N; Brunet, Anne | Molecular cell. | 2016 Jun 2; | 27259204 | |
| C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector. | Abudayyeh, Omar O; Gootenberg, Jonathan S; Konermann, Silvana; Joung, Julia; Slaymaker, Ian M; Cox, David B T; Shmakov, Sergey; Makarova, Kira S; Semenova, Ekaterina; Minakhin, Leonid; Severinov, Konstantin; Regev, Aviv; Lander, Eric S; Koonin, Eugene V; Zhang, Feng | Science (New York, N.Y.). | 2016 Aug 5; | 27256883 | |
| Design of a bioactive small molecule that targets r(AUUCU) repeats in spinocerebellar ataxia 10. | Yang, Wang-Yong; Gao, Rui; Southern, Mark; Sarkar, Partha S; Disney, Matthew D | Nature communications. | 2016 Jun 01; | 27248057 | |
| The Clustered, Regularly Interspaced, Short Palindromic Repeats-associated Endonuclease 9 (CRISPR/Cas9)-created MDM2 T309G Mutation Enhances Vitreous-induced Expression of MDM2 and Proliferation and Survival of Cells. | Duan, Yajian; Ma, Gaoen; Huang, Xionggao; D'Amore, Patricia A; Zhang, Feng; Lei, Hetian | The Journal of biological chemistry. | 2016 07 29; | 27246850 | |
| Nanofiber technology: its transformative role in nanomedicine. | James, Roshan; Laurencin, Cato T | Nanomedicine (London, England). | 2016 06; | 27246812 | |
| Cell type specificity of neurovascular coupling in cerebral cortex. | Uhlirova, Hana; K?l?ç, K?v?lc?m; Tian, Peifang; Thunemann, Martin; Desjardins, Michèle; Saisan, Payam A; Sakad?i?, Sava; Ness, Torbjørn V; Mateo, Celine; Cheng, Qun; Weldy, Kimberly L; Razoux, Florence; Vandenberghe, Matthieu; Cremonesi, Jonathan A; Ferri, Christopher Gl; Nizar, Krystal; Sridhar, Vishnu B; Steed, Tyler C; Abashin, Maxim; Fainman, Yeshaiahu; Masliah, Eliezer; Djurovic, Srdjan; Andreassen, Ole A; Silva, Gabriel A; Boas, David A; Kleinfeld, David; Buxton, Richard B; Einevoll, Gaute T; Dale, Anders M; Devor, Anna | eLife. | 2016 05 31; | 27244241 | |
| Topoisomerase 1 Regulates Gene Expression in Neurons through Cleavage Complex-Dependent and -Independent Mechanisms. | Mabb, Angela M; Simon, Jeremy M; King, Ian F; Lee, Hyeong-Min; An, Lin-Kun; Philpot, Benjamin D; Zylka, Mark J | PloS one. | 2016; | 27231886 | |
| Isocitrate Dehydrogenase Mutations Confer Dasatinib Hypersensitivity and SRC Dependence in Intrahepatic Cholangiocarcinoma. | Saha, Supriya K; Gordan, John D; Kleinstiver, Benjamin P; Vu, Phuong; Najem, Mortada S; Yeo, Jia-Chi; Shi, Lei; Kato, Yasutaka; Levin, Rebecca S; Webber, James T; Damon, Leah J; Egan, Regina K; Greninger, Patricia; McDermott, Ultan; Garnett, Mathew J; Jenkins, Roger L; Rieger-Christ, Kimberly M; Sullivan, Travis B; Hezel, Aram F; Liss, Andrew S; Mizukami, Yusuke; Goyal, Lipika; Ferrone, Cristina R; Zhu, Andrew X; Joung, J Keith; Shokat, Kevan M; Benes, Cyril H; Bardeesy, Nabeel | Cancer discovery. | 2016 07; | 27231123 | |
| An RNA-aptamer-based two-color CRISPR labeling system. | Wang, Siyuan; Su, Jun-Han; Zhang, Feng; Zhuang, Xiaowei | Scientific reports. | 2016 May 27; | 27229896 | |
| Whole-organism lineage tracing by combinatorial and cumulative genome editing. | McKenna, Aaron; Findlay, Gregory M; Gagnon, James A; Horwitz, Marshall S; Schier, Alexander F; Shendure, Jay | Science (New York, N.Y.). | 2016 Jul 29; | 27229144 | |
| Mechanisms linking electrical alternans and clinical ventricular arrhythmia in human heart failure. | Bayer, J D; Lalani, G G; Vigmond, E J; Narayan, S M; Trayanova, N A | Heart rhythm : the official journal of the Heart Rhythm Society. | 2016 May 20; | 27215536 | |
| Construction of Cell-based Neurotransmitter Fluorescent Engineered Reporters (CNiFERs) for Optical Detection of Neurotransmitters In Vivo. | Lacin, Emre; Muller, Arnaud; Fernando, Marian; Kleinfeld, David; Slesinger, Paul A | Journal of visualized experiments : JoVE. | 2016; | 27214050 | |
| In vivo photoacoustic microscopy of human cuticle microvasculature with single-cell resolution. | Hsu, Hsun-Chia; Wang, Lidai; Wang, Lihong V | Journal of biomedical optics. | 2016 May 01; | 27207113 | |
| The Structure and Dynamics of Higher-Order Assemblies: Amyloids, Signalosomes, and Granules. | Wu, Hao; Fuxreiter, Monika | Cell. | 2016 May 19; | 27203110 | |
| Identification of the long, edited dsRNAome of LPS-stimulated immune cells. | Blango, Matthew G; Bass, Brenda L | Genome research. | 2016 Jun; | 27197207 | |
| Multiplexed neural recording along a single optical fiber via optical reflectometry. | Rodriques, Samuel G; Marblestone, Adam H; Scholvin, Jorg; Dapello, Joel; Sarkar, Deblina; Mankin, Max; Gao, Ruixuan; Wood, Lowell; Boyden, Edward S | Journal of biomedical optics. | 2016 May 1; | 27194640 | |
| Bit-efficient, sub-millisecond wavefront measurement using a lock-in camera for time-reversal based optical focusing inside scattering media. | Liu, Yan; Ma, Cheng; Shen, Yuecheng; Wang, Lihong V | Optics letters. | 2016 Apr 1; | 27192226 | |
| High-Throughput, High-Resolution Mapping of Protein Localization in Mammalian Brain by In Vivo Genome Editing. | Mikuni, Takayasu; Nishiyama, Jun; Sun, Ye; Kamasawa, Naomi; Yasuda, Ryohei | Cell. | 2016 Jun 16; | 27180908 | |
| GABAA circuit mechanisms are associated with ether anesthesia-induced unconsciousness. | Akeju, Oluwaseun; Hamilos, Allison E; Song, Andrew H; Pavone, Kara J; Purdon, Patrick L; Brown, Emery N | Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. | 2016 Jun; | 27178867 | |
| Electroencephalogram signatures of ketamine anesthesia-induced unconsciousness. | Akeju, Oluwaseun; Song, Andrew H; Hamilos, Allison E; Pavone, Kara J; Flores, Francisco J; Brown, Emery N; Purdon, Patrick L | Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. | 2016 Jun; | 27178861 | |
| The leak channel NALCN controls tonic firing and glycolytic sensitivity of substantia nigra pars reticulata neurons. | Lutas, Andrew; Lahmann, Carolina; Soumillon, Magali; Yellen, Gary | eLife. | 2016 May 13; | 27177420 | |
| The wiring diagram of a glomerular olfactory system. | Berck, Matthew E; Khandelwal, Avinash; Claus, Lindsey; Hernandez-Nunez, Luis; Si, Guangwei; Tabone, Christopher J; Li, Feng; Truman, James W; Fetter, Rick D; Louis, Matthieu; Samuel, Aravinthan Dt; Cardona, Albert | eLife. | 2016 May 13; | 27177418 | |
| Variability in paralimbic dopamine signaling correlates with subjective responses to d-amphetamine. | Smith, Christopher T; Dang, Linh C; Cowan, Ronald L; Kessler, Robert M; Zald, David H | Neuropharmacology. | 2016 Sep; | 27174408 | |
| Arrhythmia risk stratification of patients after myocardial infarction using personalized heart models. | Arevalo, Hermenegild J; Vadakkumpadan, Fijoy; Guallar, Eliseo; Jebb, Alexander; Malamas, Peter; Wu, Katherine C; Trayanova, Natalia A | Nature communications. | 2016 May 10; | 27164184 | |
| Cholinergic Signaling Controls Conditioned Fear Behaviors and Enhances Plasticity of Cortical-Amygdala Circuits. | Jiang, Li; Kundu, Srikanya; Lederman, James D; López-Hernández, Gretchen Y; Ballinger, Elizabeth C; Wang, Shaohua; Talmage, David A; Role, Lorna W | Neuron. | 2016 Jun 1; | 27161525 | |
| The ciliopathy-associated CPLANE proteins direct basal body recruitment of intraflagellar transport machinery. | Toriyama, Michinori; Lee, Chanjae; Taylor, S Paige; Duran, Ivan; Cohn, Daniel H; Bruel, Ange-Line; Tabler, Jacqueline M; Drew, Kevin; Kelly, Marcus R; Kim, Sukyoung; Park, Tae Joo; Braun, Daniela A; Pierquin, Ghislaine; Biver, Armand; Wagner, Kerstin; Mal | Nature genetics. | 2016 Jun; | 27158779 | |
| Spiegelman Responds. | Spiegelman, Donna | American journal of public health. | 2016 Jun; | 27153027 | |
| Conflicting Selection Pressures Will Constrain Viral Escape from Interfering Particles: Principles for Designing Resistance-Proof Antivirals. | Rast, Luke I; Rouzine, Igor M; Rozhnova, Ganna; Bishop, Lisa; Weinberger, Ariel D; Weinberger, Leor S | PLoS computational biology. | 2016 May; | 27152856 | |
| Benchmarking Spike Rate Inference in Population Calcium Imaging. | Theis, Lucas; Berens, Philipp; Froudarakis, Emmanouil; Reimer, Jacob; Román Rosón, Miroslav; Baden, Tom; Euler, Thomas; Tolias, Andreas S; Bethge, Matthias | Neuron. | 2016 May 4; | 27151639 | |
| Exploiting Genetic Interference for Antiviral Therapy. | Tanner, Elizabeth J; Kirkegaard, Karla A; Weinberger, Leor S | PLoS genetics. | 2016 May; | 27149616 | |
| Mycobacterium Cytidylate Kinase Appears to Be an Undruggable Target. | Craig, Justin K; Risler, Jenni K; Loesch, Kimberly A; Dong, Wen; Baker, Dwight; Barrett, Lynn K; Subramanian, Sandhya; Samudrala, Ram; Van Voorhis, Wesley C | Journal of biomolecular screening. | 2016 Aug; | 27146385 | |
| Design Principles of Length Control of Cytoskeletal Structures. | Mohapatra, Lishibanya; Goode, Bruce L; Jelenkovic, Predrag; Phillips, Rob; Kondev, Jane | Annual review of biophysics. | 2016 Jul 05; | 27145876 | |
| A scaffold protein connects type IV pili with the Chp chemosensory system to mediate activation of virulence signaling in Pseudomonas aeruginosa. | Inclan, Yuki F; Persat, Alexandre; Greninger, Alexander; Von Dollen, John; Johnson, Jeffery; Krogan, Nevan; Gitai, Zemer; Engel, Joanne N | Molecular microbiology. | 2016 May 3; | 27145134 | |
| Functional connectivity dynamics during film viewing reveal common networks for different emotional experiences. | Raz, Gal; Touroutoglou, Alexandra; Wilson-Mendenhall, Christine; Gilam, Gadi; Lin, Tamar; Gonen, Tal; Jacob, Yael; Atzil, Shir; Admon, Roee; Bleich-Cohen, Maya; Maron-Katz, Adi; Hendler, Talma; Barrett, Lisa Feldman | Cognitive, affective & behavioral neuroscience. | 2016 08; | 27142636 | |
| An extrasynaptic GABAergic signal modulates a pattern of forward movement in Caenorhabditis elegans. | Shen, Yu; Wen, Quan; Liu, He; Zhong, Connie; Qin, Yuqi; Harris, Gareth; Kawano, Taizo; Wu, Min; Xu, Tianqi; Samuel, Aravinthan Dt; Zhang, Yun | eLife. | 2016 05 03; | 27138642 | |
| Wishbone identifies bifurcating developmental trajectories from single-cell data. | Setty, Manu; Tadmor, Michelle D; Reich-Zeliger, Shlomit; Angel, Omer; Salame, Tomer Meir; Kathail, Pooja; Choi, Kristy; Bendall, Sean; Friedman, Nir; Pe'er, Dana | Nature biotechnology. | 2016 Jun; | 27136076 | |
| A review of snapshot multidimensional optical imaging: measuring photon tags in parallel. | Gao, Liang; Wang, Lihong V | Physics reports. | 2016 Feb 29; | 27134340 | |
| Viral genome imaging of hepatitis C virus to probe heterogeneous viral infection and responses to antiviral therapies. | Ramanan, Vyas; Trehan, Kartik; Ong, Mei-Lyn; Luna, Joseph M; Hoffmann, Hans-Heinrich; Espiritu, Christine; Sheahan, Timothy P; Chandrasekar, Hamsika; Schwartz, Robert E; Christine, Kathleen S; Rice, Charles M; van Oudenaarden, Alexander; Bhatia, Sangeeta N | Virology. | 2016 07; | 27128351 | |
| The Ionotropic Receptors IR21a and IR25a mediate cool sensing in Drosophila. | Ni, Lina; Klein, Mason; Svec, Kathryn V; Budelli, Gonzalo; Chang, Elaine C; Ferrer, Anggie J; Benton, Richard; Samuel, Aravinthan Dt; Garrity, Paul A | eLife. | 2016 04 29; | 27126188 | |
| Poly (lactic acid)-based biomaterials for orthopaedic regenerative engineering. | Narayanan, Ganesh; Vernekar, Varadraj N; Kuyinu, Emmanuel L; Laurencin, Cato T | Advanced drug delivery reviews. | 2016 Apr 25; | 27125191 | |
| Programmable RNA-binding protein composed of repeats of a single modular unit. | Adamala, Katarzyna P; Martin-Alarcon, Daniel A; Boyden, Edward S | Proceedings of the National Academy of Sciences of the United States of America. | 2016 May 10; | 27118836 | |
| Layer-by-layer assembled fluorescent probes in the second near-infrared window for systemic delivery and detection of ovarian cancer. | Dang, Xiangnan; Gu, Li; Qi, Jifa; Correa, Santiago; Zhang, Geran; Belcher, Angela M; Hammond, Paula T | Proceedings of the National Academy of Sciences of the United States of America. | 2016 May 10; | 27114520 | |
| Crystal Structure of Cpf1 in Complex with Guide RNA and Target DNA. | Yamano, Takashi; Nishimasu, Hiroshi; Zetsche, Bernd; Hirano, Hisato; Slaymaker, Ian M; Li, Yinqing; Fedorova, Iana; Nakane, Takanori; Makarova, Kira S; Koonin, Eugene V; Ishitani, Ryuichiro; Zhang, Feng; Nureki, Osamu | Cell. | 2016 May 5; | 27114038 | |
| Feasibility of using patient-specific models and the ''minimum cut'' algorithm to predict optimal ablation targets for left atrial flutter. | Zahid, Sohail; Whyte, Kaitlyn N; Schwarz, Erica L; Blake 3rd, Robert C; Boyle, Patrick M; Chrispin, Jonathan; Prakosa, Adityo; Ipek, Esra G; Pashakhanloo, Farhad; Halperin, Henry R; Calkins, Hugh; Berger, Ronald D; Nazarian, Saman; Trayanova, Natalia A | Heart rhythm. | 2016 08; | 27108938 | |
| In vitro and in vivo rescue of aberrant splicing in CEP290-associated LCA by antisense oligonucleotide delivery. | Garanto, Alejandro; Chung, Daniel C; Duijkers, Lonneke; Corral-Serrano, Julio C; Messchaert, Muriël; Xiao, Ru; Bennett, Jean; Vandenberghe, Luk H; Collin, Rob W J | Human molecular genetics. | 2016 06 15; | 27106101 | |
| GeNemo: a search engine for web-based functional genomic data. | Zhang, Yongqing; Cao, Xiaoyi; Zhong, Sheng | Nucleic acids research. | 2016 07 08; | 27098038 | |
| Durable antitumor responses to CD47 blockade require adaptive immune stimulation. | Sockolosky, Jonathan T; Dougan, Michael; Ingram, Jessica R; Ho, Chia Chi M; Kauke, Monique J; Almo, Steven C; Ploegh, Hidde L; Garcia, K Christopher | Proceedings of the National Academy of Sciences of the United States of America. | 2016 May 10; | 27091975 | |
| Tracking Resilience to Infections by Mapping Disease Space. | Torres, Brenda Y; Oliveira, Jose Henrique M; Thomas Tate, Ann; Rath, Poonam; Cumnock, Katherine; Schneider, David S | PLoS biology. | 2016 Apr; | 27088359 | |
| How Many Parameters Does It Take to Describe Disease Tolerance? | Louie, Alexander; Song, Kyung Han; Hotson, Alejandra; Thomas Tate, Ann; Schneider, David S | PLoS biology. | 2016 Apr; | 27088212 | |
| Tutorial on photoacoustic tomography. | Zhou, Yong; Yao, Junjie; Wang, Lihong V | Journal of biomedical optics. | 2016 Jun; | 27086868 | |
| Ketamine's Antidepressant Actions: Potential Mechanisms in the Primate Medial Prefrontal Circuits That Represent Aversive Experience. | Arnsten, Amy F T; Murray, John D; Seo, Hyojung; Lee, Daeyeol | Biological psychiatry. | 2016 May 01; | 27079495 | |
| The Small Molecule Nobiletin Targets the Molecular Oscillator to Enhance Circadian Rhythms and Protect against Metabolic Syndrome. | He, Baokun; Nohara, Kazunari; Park, Noheon; Park, Yong-Sung; Guillory, Bobby; Zhao, Zhaoyang; Garcia, Jose M; Koike, Nobuya; Lee, Cheng Chi; Takahashi, Joseph S; Yoo, Seung-Hee; Chen, Zheng | Cell metabolism. | 2016 Apr 12; | 27076076 | |
| Oxidative trans to cis Isomerization of Olefins in Polyketide Biosynthesis. | Yamamoto, Tsuyoshi; Tsunematsu, Yuta; Hara, Kodai; Suzuki, Tomohiro; Kishimoto, Shinji; Kawagishi, Hirokazu; Noguchi, Hiroshi; Hashimoto, Hiroshi; Tang, Yi; Hotta, Kinya; Watanabe, Kenji | Angewandte Chemie (International ed. in English). | 2016 May 17; | 27072782 | |
| Statistical Mechanics of Allosteric Enzymes. | Einav, Tal; Mazutis, Linas; Phillips, Rob | The journal of physical chemistry. B. | 2016 Jul 07; | 27070509 | |
| A single domain antibody fragment that recognizes the adaptor ASC defines the role of ASC domains in inflammasome assembly. | Schmidt, Florian I; Lu, Alvin; Chen, Jeff W; Ruan, Jianbin; Tang, Catherine; Wu, Hao; Ploegh, Hidde L | The Journal of experimental medicine. | 2016 May 2; | 27069117 | |
| Pairing and anti-pairing: a balancing act in the diploid genome. | Joyce, Eric F; Erceg, Jelena; Wu, C-Ting | Current opinion in genetics & development. | 2016 Apr; | 27065367 | |
| Aging: progressive decline in fitness due to the rising deleteriome adjusted by genetic, environmental, and stochastic processes. | Gladyshev, Vadim N | Aging cell. | 2016 Aug; | 27060562 | |
| Guided Homing of Cells in Multi-Photon Microfabricated Bioscaffolds. | Skylar-Scott, Mark A; Liu, Man-Chi; Wu, Yuelong; Dixit, Atray; Yanik, Mehmet Fatih | Advanced healthcare materials. | 2016 May; | 27059425 | |
| The Quest toward limb regeneration: a regenerative engineering approach. | Laurencin, Cato T; Nair, Lakshmi S | Regenerative biomaterials. | 2016 Jun; | 27047679 | |
| Inflammatory signaling in human tuberculosis granulomas is spatially organized. | Marakalala, Mohlopheni J; Raju, Ravikiran M; Sharma, Kirti; Zhang, Yanjia J; Eugenin, Eliseo A; Prideaux, Brendan; Daudelin, Isaac B; Chen, Pei-Yu; Booty, Matthew G; Kim, Jin Hee; Eum, Seok Yong; Via, Laura E; Behar, Samuel M; Barry 3rd, Clifton E; Mann, | Nature medicine. | 2016 05; | 27043495 | |
| Molecular basis of caspase-1 polymerization and its inhibition by a new capping mechanism. | Lu, Alvin; Li, Yang; Schmidt, Florian I; Yin, Qian; Chen, Shuobing; Fu, Tian-Min; Tong, Alexander B; Ploegh, Hidde L; Mao, Youdong; Wu, Hao | Nature structural & molecular biology. | 2016 May; | 27043298 | |
| Sperm is epigenetically programmed to regulate gene transcription in embryos. | Teperek, Marta; Simeone, Angela; Gaggioli, Vincent; Miyamoto, Kei; Allen, George E; Erkek, Serap; Kwon, Taejoon; Marcotte, Edward M; Zegerman, Philip; Bradshaw, Charles R; Peters, Antoine H F M; Gurdon, John B; Jullien, Jerome | Genome research. | 2016 Mar 31; | 27034506 | |
| Defining Molecular Basis for Longevity Traits in Natural Yeast Isolates. | Kaya, Alaattin; Ma, Siming; Wasko, Brian; Lee, Mitchell; Kaeberlein, Matt; Gladyshev, Vadim N | npj aging and mechanisms of disease. | 2015; | 27030810 | |
| Identification of chemicals that mimic transcriptional changes associated with autism, brain aging and neurodegeneration. | Pearson, Brandon L; Simon, Jeremy M; McCoy, Eric S; Salazar, Gabriela; Fragola, Giulia; Zylka, Mark J | Nature communications. | 2016; | 27029645 | |
| Astrocyte scar formation aids central nervous system axon regeneration. | Anderson, Mark A; Burda, Joshua E; Ren, Yilong; Ao, Yan; O'Shea, Timothy M; Kawaguchi, Riki; Coppola, Giovanni; Khakh, Baljit S; Deming, Timothy J; Sofroniew, Michael V | Nature. | 2016 Apr 14; | 27027288 | |
| Cooperative Subnetworks of Molecularly Similar Interneurons in Mouse Neocortex. | Karnani, Mahesh M; Jackson, Jesse; Ayzenshtat, Inbal; Tucciarone, Jason; Manoocheri, Kasra; Snider, William G; Yuste, Rafael | Neuron. | 2016 Apr 6; | 27021171 | |
| Opening Holes in the Blanket of Inhibition: Localized Lateral Disinhibition by VIP Interneurons. | Karnani, Mahesh M; Jackson, Jesse; Ayzenshtat, Inbal; Hamzehei Sichani, Azadeh; Manoocheri, Kasra; Kim, Samuel; Yuste, Rafael | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Mar 23; | 27013676 | |
| Dysfunctional Calcium and Glutamate Signaling in Striatal Astrocytes from Huntington's Disease Model Mice. | Jiang, Ruotian; Diaz-Castro, Blanca; Looger, Loren L; Khakh, Baljit S | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Mar 23; | 27013675 | |
| Exploring Polypharmacology in Drug Discovery and Repurposing Using the CANDO Platform. | Chopra, Gaurav; Samudrala, Ram | Current pharmaceutical design. | 2016; | 27013226 | |
| Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion. | Dunn, Timothy W; Mu, Yu; Narayan, Sujatha; Randlett, Owen; Naumann, Eva A; Yang, Chao-Tsung; Schier, Alexander F; Freeman, Jeremy; Engert, Florian; Ahrens, Misha B | eLife. | 2016 Mar 22; | 27003593 | |
| CCR7 and IRF4-dependent dendritic cells regulate lymphatic collecting vessel permeability. | Ivanov, Stoyan; Scallan, Joshua P; Kim, Ki-Wook; Werth, Kathrin; Johnson, Michael W; Saunders, Brian T; Wang, Peter L; Kuan, Emma L; Straub, Adam C; Ouhachi, Melissa; Weinstein, Erica G; Williams, Jesse W; Briseño, Carlos; Colonna, Marco; Isakson, Brant E | The Journal of clinical investigation. | 2016 Apr 1; | 26999610 | |
| A role for the bacterial GATC methylome in antibiotic stress survival. | Cohen, Nadia R; Ross, Christian A; Jain, Saloni; Shapiro, Rebecca S; Gutierrez, Arnaud; Belenky, Peter; Li, Hu; Collins, James J | Nature genetics. | 2016 05; | 26998690 | |
| Regenerative Engineering of Cartilage Using Adipose-Derived Stem Cells. | Kasir, Rafid; Vernekar, Varadraj N; Laurencin, Cato T | Regenerative engineering and translational medicine. | 2015 Dec 1; | 26998511 | |
| Physostigmine and Methylphenidate Induce Distinct Arousal States During Isoflurane General Anesthesia in Rats. | Kenny, Jonathan D; Chemali, Jessica J; Cotten, Joseph F; Van Dort, Christa J; Kim, Seong-Eun; Ba, Demba; Taylor, Norman E; Brown, Emery N; Solt, Ken | Anesthesia and analgesia. | 2016 Mar 17; | 26991753 | |
| REGENERATIVE ENGINEERING: APPROACHES TO LIMB REGENERATION AND OTHER GRAND CHALLENGES. | Laurencin, Cato T; Nair, Lakshmi S | Regenerative engineering and translational medicine. | 2015 Apr 1; | 26985451 | |
| Phenalenone Polyketide Cyclization Catalyzed by Fungal Polyketide Synthase and Flavin-Dependent Monooxygenase. | Gao, Shu-Shan; Duan, Abing; Xu, Wei; Yu, Peiyuan; Hang, Leibniz; Houk, K N; Tang, Yi | Journal of the American Chemical Society. | 2016 Mar 22; | 26978228 | |
| Focusing light through scattering media by full-polarization digital optical phase conjugation. | Shen, Yuecheng; Liu, Yan; Ma, Cheng; Wang, Lihong V | Optics letters. | 2016 Mar 15; | 26977651 | |
| Hybrid Microscopy: Enabling Inexpensive High-Performance Imaging through Combined Physical and Optical Magnifications. | Zhang, Yu Shrike; Chang, Jae-Byum; Alvarez, Mario Moisés; Trujillo-de Santiago, Grissel; Aleman, Julio; Batzaya, Byambaa; Krishnadoss, Vaishali; Ramanujam, Aishwarya Aravamudhan; Kazemzadeh-Narbat, Mehdi; Chen, Fei; Tillberg, Paul W; Dokmeci, Mehmet Remzi | Scientific reports. | 2016; | 26975883 | |
| Spike sorting for large, dense electrode arrays. | Rossant, Cyrille; Kadir, Shabnam N; Goodman, Dan F M; Schulman, John; Hunter, Maximilian L D; Saleem, Aman B; Grosmark, Andres; Belluscio, Mariano; Denfield, George H; Ecker, Alexander S; Tolias, Andreas S; Solomon, Samuel; Buzsaki, Gyorgy; Carandini, Matteo; Harris, Kenneth D | Nature neuroscience. | 2016 Apr; | 26974951 | |
| Calcium imaging of neural circuits with extended depth-of-field light-sheet microscopy. | Quirin, Sean; Vladimirov, Nikita; Yang, Chao-Tsung; Peterka, Darcy S; Yuste, Rafael; B Ahrens, Misha | Optics letters. | 2016 Mar 1; | 26974063 | |
| Opportunities in the design and application of RNA for gene expression control. | McKeague, Maureen; Wong, Remus S; Smolke, Christina D | Nucleic acids research. | 2016 Apr 20; | 26969733 | |
| P450-Mediated Coupling of Indole Fragments To Forge Communesin and Unnatural Isomers. | Lin, Hsiao-Ching; McMahon, Travis C; Patel, Ashay; Corsello, Michael; Simon, Adam; Xu, Wei; Zhao, Muxun; Houk, K N; Garg, Neil K; Tang, Yi | Journal of the American Chemical Society. | 2016 Mar 18; | 26963294 | |
| VIP+ interneurons control neocortical activity across brain states. | Jackson, Jesse; Ayzenshtat, Inbal; Karnani, Mahesh M; Yuste, Rafael | Journal of neurophysiology. | 2016 Jun 1; | 26961109 | |
| Combinatorial Generation of Chemical Diversity by Redox Enzymes in Chaetoviridin Biosynthesis. | Sato, Michio; Winter, Jaclyn M; Kishimoto, Shinji; Noguchi, Hiroshi; Tang, Yi; Watanabe, Kenji | Organic letters. | 2016 Mar 18; | 26959241 | |
| Biosynthesis of the ?-nitro-containing cyclic tripeptide psychrophilin. | Zhao, Muxun; Lin, Hsiao-Ching; Tang, Yi | The Journal of antibiotics. | 2016 Jul; | 26956794 | |
| The use of (18)F-2-fluorodeoxyglucose (FDG) to label antibody fragments for immuno-PET of pancreatic cancer. | Rashidian, Mohammad; Keliher, Edmund; Dougan, Michael; Juras, Patrick K; Cavallari, Marco; Wojtkiewicz, Gregory R; Jacobsen, Johanne; Edens, Jerre G; Tas, Jeroen M G; Victora, Gabriel; Weissleder, Ralph; Ploegh, Hidde | ACS central science. | 2015 Jun 24; | 26955657 | |
| Using synthetic biology to make cells tomorrow's test tubes. | Garcia, Hernan G; Brewster, Robert C; Phillips, Rob | Integrative biology : quantitative biosciences from nano to macro. | 2016 Apr 18; | 26952708 | |
| Crystal structure of a substrate-engaged SecY protein-translocation channel. | Li, Long; Park, Eunyong; Ling, JingJing; Ingram, Jessica; Ploegh, Hidde; Rapoport, Tom A | Nature. | 2016 Mar 17; | 26950603 | |
| Novel Dopamine Therapeutics for Cognitive Deficits in Schizophrenia. | Arnsten, Amy F T; Girgis, Ragy R; Gray, David L; Mailman, Richard B | Biological psychiatry. | 2016 Jan 18; | 26946382 | |
| Neurovascular and Immuno-Imaging: From Mechanisms to Therapies. Proceedings of the Inaugural Symposium. | Akassoglou, Katerina; Agalliu, Dritan; Chang, Christopher J; Davalos, Dimitrios; Grutzendler, Jaime; Hillman, Elizabeth M C; Khakh, Baljit S; Kleinfeld, David; McGavern, Dorian B; Nelson, Sarah J; Zlokovic, Berislav V | Frontiers in neuroscience. | 2016; | 26941593 | |
| Opsin spectral sensitivity determines the effectiveness of optogenetic termination of ventricular fibrillation in the human heart: A simulation study. | Karathanos, Thomas V; Bayer, Jason D; Wang, Dafang; Boyle, Patrick M; Trayanova, Natalia A | The Journal of physiology. | 2016 Mar 4; | 26941055 | |
| Wireless Cortical Brain-Machine Interface for Whole-Body Navigation in Primates. | Rajangam, Sankaranarayani; Tseng, Po-He; Yin, Allen; Lehew, Gary; Schwarz, David; Lebedev, Mikhail A; Nicolelis, Miguel A L | Scientific reports. | 2016; | 26938468 | |
| Assembly and operation of the autopatcher for automated intracellular neural recording in vivo. | Kodandaramaiah, Suhasa B; Holst, Gregory L; Wickersham, Ian R; Singer, Annabelle C; Franzesi, Giovanni Talei; McKinnon, Michael L; Forest, Craig R; Boyden, Edward S | Nature protocols. | 2016 Apr; | 26938115 | |
| UVnovo: A de Novo Sequencing Algorithm Using Single Series of Fragment Ions via Chromophore Tagging and 351 nm Ultraviolet Photodissociation Mass Spectrometry. | Robotham, Scott A; Horton, Andrew P; Cannon, Joe R; Cotham, Victoria C; Marcotte, Edward M; Brodbelt, Jennifer S | Analytical chemistry. | 2016 Apr 5; | 26938041 | |
| Reactivation of Latent HIV-1 Expression by Engineered TALE Transcription Factors. | Perdigão, Pedro; Gaj, Thomas; Santa-Marta, Mariana; Barbas 3rd, Carlos F; Goncalves, Joao | PloS one. | 2016; | 26933881 | |
| An automatic experimental apparatus to study arm reaching in New World monkeys. | Yin, Allen; An, Jehi; Lehew, Gary; Lebedev, Mikhail A; Nicolelis, Miguel A L | Journal of neuroscience methods. | 2016 May 1; | 26928257 | |
| Frequency fluctuations in silicon nanoresonators. | Sansa, Marc; Sage, Eric; Bullard, Elizabeth C; Gély, Marc; Alava, Thomas; Colinet, Eric; Naik, Akshay K; Villanueva, Luis Guillermo; Duraffourg, Laurent; Roukes, Michael L; Jourdan, Guillaume; Hentz, Sébastien | Nature nanotechnology. | 2016 Jun; | 26925826 | |
| Intravenous immune globulin suppresses angiogenesis in mice and humans. | Yasuma, Reo; Cicatiello, Valeria; Mizutani, Takeshi; Tudisco, Laura; Kim, Younghee; Tarallo, Valeria; Bogdanovich, Sasha; Hirano, Yoshio; Kerur, Nagaraj; Li, Shengjian; Yasuma, Tetsuhiro; Fowler, Benjamin J; Wright, Charles B; Apicella, Ivana; Greco, Adelaide; Brunetti, Arturo; Ambati, Balamurali K; Helmers, Sevim Barbasso; Lundberg, Ingrid E; Viklicky, Ondrej; Leusen, Jeanette Hw; Verbeek, J Sjef; Gelfand, Bradley D; Bastos-Carvalho, Ana; De Falco, Sandro; Ambati, Jayakrishna | Signal transduction and targeted therapy. | 2016; | 26925256 | |
| Alzheimer's Disease Risk Polymorphisms Regulate Gene Expression in the ZCWPW1 and the CELF1 Loci. | Karch, Celeste M; Ezerskiy, Lubov A; Bertelsen, Sarah; Alzheimer?s Disease Genetics Consortium (ADGC); Goate, Alison M | PloS one. | 2016; | 26919393 | |
| Human IgG1 antibodies suppress angiogenesis in a target-independent manner. | Bogdanovich, Sasha; Kim, Younghee; Mizutani, Takeshi; Yasuma, Reo; Tudisco, Laura; Cicatiello, Valeria; Bastos-Carvalho, Ana; Kerur, Nagaraj; Hirano, Yoshio; Baffi, Judit Z; Tarallo, Valeria; Li, Shengjian; Yasuma, Tetsuhiro; Arpitha, Parthasarathy; Fowler, Benjamin J; Wright, Charles B; Apicella, Ivana; Greco, Adelaide; Brunetti, Arturo; Ruvo, Menotti; Sandomenico, Annamaria; Nozaki, Miho; Ijima, Ryo; Kaneko, Hiroki; Ogura, Yuichiro; Terasaki, Hiroko; Ambati, Balamurali K; Leusen, Jeanette Hw; Langdon, Wallace Y; Clark, Michael R; Armour, Kathryn L; Bruhns, Pierre; Verbeek, J Sjef; Gelfand, Bradley D; De Falco, Sandro; Ambati, Jayakrishna | Signal transduction and targeted therapy. | 2016; | 26918197 | |
| Association of Left Atrial Local Conduction Velocity With Late Gadolinium Enhancement on Cardiac Magnetic Resonance in Patients With Atrial Fibrillation. | Fukumoto, Kotaro; Habibi, Mohammadali; Ipek, Esra Gucuk; Zahid, Sohail; Khurram, Irfan M; Zimmerman, Stefan L; Zipunnikov, Vadim; Spragg, David; Ashikaga, Hiroshi; Trayanova, Natalia; Tomaselli, Gordon F; Rickard, John; Marine, Joseph E; Berger, Ronald D; | Circulation. Arrhythmia and electrophysiology. | 2016 Mar; | 26917814 | |
| Hypoxia as a therapy for mitochondrial disease. | Jain, Isha H; Zazzeron, Luca; Goli, Rahul; Alexa, Kristen; Schatzman-Bone, Stephanie; Dhillon, Harveen; Goldberger, Olga; Peng, Jun; Shalem, Ophir; Sanjana, Neville E; Zhang, Feng; Goessling, Wolfram; Zapol, Warren M; Mootha, Vamsi K | Science (New York, N.Y.). | 2016 Apr 1; | 26917594 | |
| Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes. | Solomon, Kevin V; Haitjema, Charles H; Henske, John K; Gilmore, Sean P; Borges-Rivera, Diego; Lipzen, Anna; Brewer, Heather M; Purvine, Samuel O; Wright, Aaron T; Theodorou, Michael K; Grigoriev, Igor V; Regev, Aviv; Thompson, Dawn A; O'Malley, Michelle A | Science (New York, N.Y.). | 2016 Mar 11; | 26912365 | |
| Embedding a Panoramic Representation of Infrared Light in the Adult Rat Somatosensory Cortex through a Sensory Neuroprosthesis. | Hartmann, Konstantin; Thomson, Eric E; Zea, Ivan; Yun, Richy; Mullen, Peter; Canarick, Jay; Huh, Albert; Nicolelis, Miguel A L | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Feb 24; | 26911689 | |
| Temporal modulation of collective cell behavior controls vascular network topology. | Kur, Esther; Kim, Jiha; Tata, Aleksandra; Comin, Cesar H; Harrington, Kyle I; Costa, Luciano da F; Bentley, Katie; Gu, Chenghua | eLife. | 2016 Feb 24; | 26910011 | |
| moco: Fast Motion Correction for Calcium Imaging. | Dubbs, Alexander; Guevara, James; Yuste, Rafael | Frontiers in neuroinformatics. | 2016; | 26909035 | |
| Quantitative Multiscale Cell Imaging in Controlled 3D Microenvironments. | Welf, Erik S; Driscoll, Meghan K; Dean, Kevin M; Schäfer, Claudia; Chu, Jun; Davidson, Michael W; Lin, Michael Z; Danuser, Gaudenz; Fiolka, Reto | Developmental cell. | 2016 Feb 22; | 462-75 | 26906741 |
| Contrasting responses within a single neuron class enable sex-specific attraction in Caenorhabditis elegans. | Narayan, Anusha; Venkatachalam, Vivek; Durak, Omer; Reilly, Douglas K; Bose, Neelanjan; Schroeder, Frank C; Samuel, Aravinthan D T; Srinivasan, Jagan; Sternberg, Paul W | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Mar 08; | 26903633 | |
| Shooting for the Moon: Nanoscale Approaches to Cancer. | Hammond, Paula T | ACS nano. | 2016 Feb 23; | 26902596 | |
| Probing the Complexities of Astrocyte Calcium Signaling. | Shigetomi, Eiji; Patel, Sandip; Khakh, Baljit S | Trends in cell biology. | 2016 Feb 16; | 26896246 | |
| Intermittent drivers anchoring to structural heterogeneities as a major pathophysiological mechanism of human persistent atrial fibrillation. | Haissaguerre, Michel; Shah, Ashok J; Cochet, Hubert; Hocini, Meleze; Dubois, Remi; Efimov, Igor; Vigmond, Edward; Bernus, Olivier; Trayanova, Natalia | The Journal of physiology. | 2016 May 1; | 26890861 | |
| Membrane Potential Dynamics of CA1 Pyramidal Neurons during Hippocampal Ripples in Awake Mice. | Hulse, Brad K; Moreaux, Laurent C; Lubenov, Evgueniy V; Siapas, Athanassios G | Neuron. | 2016 Feb 17; | 800-13 | 26889811 |
| Evaluating Public Health Interventions: 2. Stepping Up to Routine Public Health Evaluation With the Stepped Wedge Design. | Spiegelman, Donna | American journal of public health. | 2016 Mar; | 26885961 | |
| Photoacoustic microscopy of arteriovenous shunts and blood diffusion in early-stage tumors. | Yeh, Chenghung; Liang, Jinyang; Zhou, Yong; Hu, Song; Sohn, Rebecca E; Arbeit, Jeffrey M; Wang, Lihong V | Journal of biomedical optics. | 2016 Feb; | 26882446 | |
| Discovery of 2-Indole-acylsulfonamide Myeloid Cell Leukemia 1 (Mcl-1) Inhibitors Using Fragment-Based Methods. | Pelz, Nicholas F; Bian, Zhiguo; Zhao, Bin; Shaw, Subrata; Tarr, James C; Belmar, Johannes; Gregg, Claire; Camper, DeMarco V; Goodwin, Craig M; Arnold, Allison L; Sensintaffar, John L; Friberg, Anders; Rossanese, Olivia W; Lee, Taekyu; Olejniczak, Edward T; Fesik, Stephen W | Journal of medicinal chemistry. | 2016 Mar 10; | 26878343 | |
| Structure and Engineering of Francisella novicida Cas9. | Hirano, Hisato; Gootenberg, Jonathan S; Horii, Takuro; Abudayyeh, Omar O; Kimura, Mika; Hsu, Patrick D; Nakane, Takanori; Ishitani, Ryuichiro; Hatada, Izuho; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu | Cell. | 2016 Feb 25; | 26875867 | |
| Regenerative Medicine: Potential Mechanisms of Cardiac Recovery in Takotsubo Cardiomyopathy. | Chang, Andrew Y; Kittle, Jessie T; Wu, Sean M | Current treatment options in cardiovascular medicine. | 2016 Mar; | 26874708 | |
| Photoacoustic elastography. | Hai, Pengfei; Yao, Junjie; Li, Guo; Li, Chiye; Wang, Lihong V | Optics letters. | 2016 Feb 15; | 26872173 | |
| Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes. | Phanse, Sadhna; Wan, Cuihong; Borgeson, Blake; Tu, Fan; Drew, Kevin; Clark, Greg; Xiong, Xuejian; Kagan, Olga; Kwan, Julian; Bezginov, Alexandr; Chessman, Kyle; Pal, Swati; Cromar, Graham; Papoulas, Ophelia; Ni, Zuyao; Boutz, Daniel R; Stoilova, Snejana; | Data in brief. | 2016 Mar; | 26870755 | |
| Multimodal stimulus coding by a gustatory sensory neuron in Drosophila larvae. | van Giesen, Lena; Hernandez-Nunez, Luis; Delasoie-Baranek, Sophie; Colombo, Martino; Renaud, Philippe; Bruggmann, Rémy; Benton, Richard; Samuel, Aravinthan D T; Sprecher, Simon G | Nature communications. | 2016 Feb 11; | 26864722 | |
| Design of a mobile, homogeneous, and efficient electromagnet with a large field of view for neonatal low-field MRI. | Lother, Steffen; Schiff, Steven J; Neuberger, Thomas; Jakob, Peter M; Fidler, Florian | Magma (New York, N.Y.). | 2016 Aug; | 26861046 | |
| Cytosolic NADH-NAD+ redox visualized in brain slices by two-photon fluorescence lifetime biosensor imaging. | Mongeon, Rebecca; Venkatachalam, Veena; Yellen, Gary | Antioxidants & redox signaling. | 2016 Feb 9; | 26857245 | |
| Saccharomyces cerevisiae as a tool for mining, studying and engineering fungal polyketide synthases. | Bond, Carly; Tang, Yi; Li, Li | Fungal genetics and biology : FG & B. | 2016 Feb 2; | 26850128 | |
| Clostridium difficile associated risk of death score (CARDS): a novel severity score to predict mortality among hospitalised patients with C. difficile infection. | Kassam, Z; Cribb Fabersunne, C; Smith, M B; Alm, E J; Kaplan, G G; Nguyen, G C; Ananthakrishnan, A N | Alimentary pharmacology & therapeutics. | 2016 Mar; | 26849527 | |
| Computational models of heart disease. | Smith, Nic; Trayanova, Natalia | Drug discovery today. Disease models. | 2014; | 2-Jan | 26843884 |
| On the Structure of Neuronal Population Activity under Fluctuations in Attentional State. | Ecker, Alexander S; Denfield, George H; Bethge, Matthias; Tolias, Andreas S | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Feb 3; | 26843656 | |
| Structurally Defined ?MHC-II Nanobody-Drug Conjugates: A Therapeutic and Imaging System for B-Cell Lymphoma. | Fang, Tao; Duarte, Joao N; Ling, Jingjing; Li, Zeyang; Guzman, Jonathan S; Ploegh, Hidde L | Angewandte Chemie (International ed. in English). | 2016 Feb 12; | 26840214 | |
| Animal models of osteoarthritis: classification, update, and measurement of outcomes. | Kuyinu, Emmanuel L; Narayanan, Ganesh; Nair, Lakshmi S; Laurencin, Cato T | Journal of orthopaedic surgery and research. | 2016; | 26837951 | |
| Precisely parameterized experimental and computational models of tissue organization. | Molitoris, Jared M; Paliwal, Saurabh; Sekar, Rajesh B; Blake, Robert; Park, JinSeok; Trayanova, Natalia A; Tung, Leslie; Levchenko, Andre | Integrative biology : quantitative biosciences from nano to macro. | 2016 Feb; | 26822672 | |
| Engineering nanolayered particles for modular drug delivery. | Correa, Santiago; Dreaden, Erik C; Gu, Li; Hammond, Paula T | Journal of controlled release : official journal of the Controlled Release Society. | 2016 Oct 28; | 26809005 | |
| Tudor-SN Interacts with Piwi Antagonistically in Regulating Spermatogenesis but Synergistically in Silencing Transposons in Drosophila. | Ku, Hsueh-Yen; Gangaraju, Vamsi K; Qi, Hongying; Liu, Na; Lin, Haifan | PLoS genetics. | 2016 Jan; | 26808625 | |
| Genes with monoallelic expression contribute disproportionately to genetic diversity in humans. | Savova, Virginia; Chun, Sung; Sohail, Mashaal; McCole, Ruth B; Witwicki, Robert; Gai, Lisa; Lenz, Tobias L; Wu, C-ting; Sunyaev, Shamil R; Gimelbrant, Alexander A | Nature genetics. | 2016 Mar; | 26808112 | |
| Neural Circuits Underlying Visually Evoked Escapes in Larval Zebrafish. | Dunn, Timothy W; Gebhardt, Christoph; Naumann, Eva A; Riegler, Clemens; Ahrens, Misha B; Engert, Florian; Del Bene, Filippo | Neuron. | 2016 Feb 3; | 613-28 | 26804997 |
| Production of New Cladosporin Analogues by Reconstitution of the Polyketide Synthases Responsible for the Biosynthesis of this Antimalarial Agent. | Cochrane, Rachel V K; Sanichar, Randy; Lambkin, Gareth R; Reiz, Béla; Xu, Wei; Tang, Yi; Vederas, John C | Angewandte Chemie (International ed. in English). | 2016 Jan 11; | 26783060 | |
| Piwi maintains germline stem cells and oogenesis in Drosophila through negative regulation of Polycomb group proteins. | Peng, Jamy C; Valouev, Anton; Liu, Na; Lin, Haifan | Nature genetics. | 2016 Mar; | 26780607 | |
| Whole-brain activity mapping onto a zebrafish brain atlas. | Randlett, Owen; Wee, Caroline L; Naumann, Eva A; Nnaemeka, Onyeka; Schoppik, David; Fitzgerald, James E; Portugues, Ruben; Lacoste, Alix M B; Riegler, Clemens; Engert, Florian; Schier, Alexander F | Nature methods. | 2015 Nov; | 1039-46 | 26778924 |
| Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data. | Pnevmatikakis, Eftychios A; Soudry, Daniel; Gao, Yuanjun; Machado, Timothy A; Merel, Josh; Pfau, David; Reardon, Thomas; Mu, Yu; Lacefield, Clay; Yang, Weijian; Ahrens, Misha; Bruno, Randy; Jessell, Thomas M; Peterka, Darcy S; Yuste, Rafael; Paninski, Liam | Neuron. | 2016 Jan 20; | 26774160 | |
| Simultaneous Multi-plane Imaging of Neural Circuits. | Yang, Weijian; Miller, Jae-Eun Kang; Carrillo-Reid, Luis; Pnevmatikakis, Eftychios; Paninski, Liam; Yuste, Rafael; Peterka, Darcy S | Neuron. | 2016 Jan 20; | 269-84 | 26774159 |
| Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin. | Snyder, Matthew W; Kircher, Martin; Hill, Andrew J; Daza, Riza M; Shendure, Jay | Cell. | 2016 Jan 14; | 57-68 | 26771485 |
| Super-resolution imaging reveals distinct chromatin folding for different epigenetic states. | Boettiger, Alistair N; Bintu, Bogdan; Moffitt, Jeffrey R; Wang, Siyuan; Beliveau, Brian J; Fudenberg, Geoffrey; Imakaev, Maxim; Mirny, Leonid A; Wu, Chao-ting; Zhuang, Xiaowei | Nature. | 2016 Jan 21; | 26760202 | |
| Computational discovery of pathway-level genetic vulnerabilities in non-small-cell lung cancer. | Young, Jonathan H; Peyton, Michael; Seok Kim, Hyun; McMillan, Elizabeth; Minna, John D; White, Michael A; Marcotte, Edward M | Bioinformatics (Oxford, England). | 2016 May 1; | 26755624 | |
| Identification and Optimization of Anthranilic Acid Based Inhibitors of Replication Protein?A. | Patrone, James D; Pelz, Nicholas F; Bates, Brittney S; Souza-Fagundes, Elaine M; Vangamudi, Bhavatarini; Camper, Demarco V; Kuznetsov, Alexey G; Browning, Carrie F; Feldkamp, Michael D; Frank, Andreas O; Gilston, Benjamin A; Olejniczak, Edward T; Rossanese, Olivia W; Waterson, Alex G; Chazin, Walter J; Fesik, Stephen W | ChemMedChem. | 2016 Jan 8; | 26748787 | |
| Targeting Prefrontal Cortical Systems for Drug Development: Potential Therapies for Cognitive Disorders. | Arnsten, Amy F T; Wang, Min | Annual review of pharmacology and toxicology. | 2016; | 26738476 | |
| High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects. | Kleinstiver, Benjamin P; Pattanayak, Vikram; Prew, Michelle S; Tsai, Shengdar Q; Nguyen, Nhu T; Zheng, Zongli; Joung, J Keith | Nature. | 2016 Jan 28; | 26735016 | |
| Myocardial Infarct Segmentation From Magnetic Resonance Images for Personalized Modeling of Cardiac Electrophysiology. | Ukwatta, Eranga; Arevalo, Hermenegild; Li, Kristina; Yuan, Jing; Qiu, Wu; Malamas, Peter; Wu, Katherine C; Trayanova, Natalia A; Vadakkumpadan, Fijoy | IEEE transactions on medical imaging. | 2016 Jun; | 26731693 | |
| A dual fluorescent reporter for the investigation of methionine mistranslation in live cells. | Gomes, Ana Cristina; Kordala, Anna J; Strack, Rita; Wang, Xiaoyun; Geslain, Renaud; Delaney, Kamila; Clark, Wesley C; Keenan, Robert; Pan, Tao | RNA (New York, N.Y.). | 2016 Mar; | 26729921 | |
| Poly(glycoamidoamine) Brushes Formulated Nanomaterials for Systemic siRNA and mRNA Delivery in Vivo. | Dong, Yizhou; Dorkin, J Robert; Wang, Weiheng; Chang, Philip H; Webber, Matthew J; Tang, Benjamin C; Yang, Junghoon; Abutbul-Ionita, Inbal; Danino, Dganit; DeRosa, Frank; Heartlein, Michael; Langer, Robert; Anderson, Daniel G | Nano letters. | 2016 Feb 10; | 26727632 | |
| Rate-dependent force, intracellular calcium, and action potential voltage alternans are modulated by sarcomere length and heart failure induced-remodeling of thin filament regulation in human heart failure: A myocyte modeling study. | Zile, Melanie A; Trayanova, Natalia A | Progress in biophysics and molecular biology. | 2015 Dec 25; | 26724571 | |
| In vivo gene editing in dystrophic mouse muscle and muscle stem cells. | Tabebordbar, Mohammadsharif; Zhu, Kexian; Cheng, Jason K W; Chew, Wei Leong; Widrick, Jeffrey J; Yan, Winston X; Maesner, Claire; Wu, Elizabeth Y; Xiao, Ru; Ran, F Ann; Cong, Le; Zhang, Feng; Vandenberghe, Luk H; Church, George M; Wagers, Amy J | Science (New York, N.Y.). | 2016 Jan 22; | 407-11 | 26721686 |
| Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals. | Sharma, Upasna; Conine, Colin C; Shea, Jeremy M; Boskovic, Ana; Derr, Alan G; Bing, Xin Y; Belleannee, Clemence; Kucukural, Alper; Serra, Ryan W; Sun, Fengyun; Song, Lina; Carone, Benjamin R; Ricci, Emiliano P; Li, Xin Z; Fauquier, Lucas; Moore, Melissa J | Science (New York, N.Y.). | 2016 Jan 22; | 26721685 | |
| In vivo genome editing improves muscle function in a mouse model of Duchenne muscular dystrophy. | Nelson, Christopher E; Hakim, Chady H; Ousterout, David G; Thakore, Pratiksha I; Moreb, Eirik A; Castellanos Rivera, Ruth M; Madhavan, Sarina; Pan, Xiufang; Ran, F Ann; Yan, Winston X; Asokan, Aravind; Zhang, Feng; Duan, Dongsheng; Gersbach, Charles A | Science (New York, N.Y.). | 2016 Jan 22; | 403-7 | 26721684 |
| Photoacoustic tomography of vascular compliance in humans. | Hai, Pengfei; Zhou, Yong; Liang, Jinyang; Li, Chiye; Wang, Lihong V | Journal of biomedical optics. | 2015; | 26720875 | |
| In vivo photoacoustic tomography of myoglobin oxygen saturation. | Lin, Li; Yao, Junjie; Li, Lei; Wang, Lihong V | Journal of biomedical optics. | 2016 Jun; | 26719943 | |
| Materials for non-viral intracellular delivery of messenger RNA therapeutics. | Kauffman, Kevin J; Webber, Matthew J; Anderson, Daniel G | Journal of controlled release : official journal of the Controlled Release Society. | 2016 Oct 28; | 26718856 | |
| High Throughput Layer-by-Layer Films for Extracting Film Forming Parameters and Modulating Film Interactions with Cells. | Jaklenec, Ana; Anselmo, Aaron C; Hong, Jinkee; Vegas, Arturo J; Kozminsky, Molly; Langer, Robert; Hammond, Paula T; Anderson, Daniel G | ACS applied materials & interfaces. | 2016 Jan 27; | 26713554 | |
| Methionine Mistranslation Bypasses the Restraint of the Genetic Code to Generate Mutant Proteins with Distinct Activities. | Wang, Xiaoyun; Pan, Tao | PLoS genetics. | 2015 Dec; | 26709516 | |
| Periodic-shRNA molecules are capable of gene silencing, cytotoxicity and innate immune activation in cancer cells. | Shopsowitz, Kevin E; Wu, Connie; Liu, Gina; Dreaden, Erik C; Hammond, Paula T | Nucleic acids research. | 2016 Jan 29; | 26704983 | |
| Genetic and Epigenetic Variation, but Not Diet, Shape the Sperm Methylome. | Shea, Jeremy M; Serra, Ryan W; Carone, Benjamin R; Shulha, Hennady P; Kucukural, Alper; Ziller, Michael J; Vallaster, Markus P; Gu, Hongcang; Tapper, Andrew R; Gardner, Paul D; Meissner, Alexander; Garber, Manuel; Rando, Oliver J | Developmental cell. | 2015 Dec 21; | 26702833 | |
| Insulator dysfunction and oncogene activation in IDH mutant gliomas. | Flavahan, William A; Drier, Yotam; Liau, Brian B; Gillespie, Shawn M; Venteicher, Andrew S; Stemmer-Rachamimov, Anat O; Suvà, Mario L; Bernstein, Bradley E | Nature. | 2016 Jan 07; | 26700815 | |
| Close-Packed Silicon Microelectrodes for Scalable Spatially Oversampled Neural Recording. | Scholvin, Jorg; Kinney, Justin P; Bernstein, Jacob G; Moore-Kochlacs, Caroline; Kopell, Nancy; Fonstad, Clifton G; Boyden, Edward S | IEEE transactions on bio-medical engineering. | 2016 Jan; | 120-30 | 26699649 |
| Nano-Bioelectronics. | Zhang, Anqi; Lieber, Charles M | Chemical reviews. | 2016 Jan 13; | 26691648 | |
| Electrophysiological, transcriptomic and morphologic profiling of single neurons using Patch-seq. | Cadwell, Cathryn R; Palasantza, Athanasia; Jiang, Xiaolong; Berens, Philipp; Deng, Qiaolin; Yilmaz, Marlene; Reimer, Jacob; Shen, Shan; Bethge, Matthias; Tolias, Kimberley F; Sandberg, Rickard; Tolias, Andreas S | Nature biotechnology. | 2016 Feb; | 26689543 | |
| Mice with Shank3 Mutations Associated with ASD and Schizophrenia Display Both Shared and Distinct Defects. | Zhou, Yang; Kaiser, Tobias; Monteiro, Patrícia; Zhang, Xiangyu; Van der Goes, Marie S; Wang, Dongqing; Barak, Boaz; Zeng, Menglong; Li, Chenchen; Lu, Congyi; Wells, Michael; Amaya, Aldo; Nguyen, Shannon; Lewis, Michael; Sanjana, Neville; Zhou, Yongdi; Zha | Neuron. | 2016 Jan 6; | 26687841 | |
| Cell-Specific Transcriptional Profiling of Ciliated Sensory Neurons Reveals Regulators of Behavior and Extracellular Vesicle Biogenesis. | Wang, Juan; Kaletsky, Rachel; Silva, Malan; Williams, April; Haas, Leonard A; Androwski, Rebecca J; Landis, Jessica N; Patrick, Cory; Rashid, Alina; Santiago-Martinez, Dianaliz; Gravato-Nobre, Maria; Hodgkin, Jonathan; Hall, David H; Murphy, Coleen T; Barr, Maureen M | Current biology : CB. | 2015 Dec 21; | 26687621 | |
| The C. elegans adult neuronal IIS/FOXO transcriptome reveals adult phenotype regulators. | Kaletsky, Rachel; Lakhina, Vanisha; Arey, Rachel; Williams, April; Landis, Jessica; Ashraf, Jasmine; Murphy, Coleen T | Nature. | 2016 Jan 7; | 26675724 | |
| Predicting the impact of promoter variability on regulatory outputs. | Kreamer, Naomi N; Phillips, Rob; Newman, Dianne K; Boedicker, James Q | Scientific reports. | 2015; | 26675057 | |
| Temperature dependent mistranslation in a hyperthermophile adapts proteins to lower temperatures. | Schwartz, Michael H; Pan, Tao | Nucleic acids research. | 2016 Jan 08; | 26657639 | |
| Applications of CRISPR-Cas systems in neuroscience. | Heidenreich, Matthias; Zhang, Feng | Nature reviews. Neuroscience. | 2016 Jan; | 26656253 | |
| Long-term neural and physiological phenotyping of a single human. | Poldrack, Russell A; Laumann, Timothy O; Koyejo, Oluwasanmi; Gregory, Brenda; Hover, Ashleigh; Chen, Mei-Yen; Gorgolewski, Krzysztof J; Luci, Jeffrey; Joo, Sung Jun; Boyd, Ryan L; Hunicke-Smith, Scott; Simpson, Zack Booth; Caven, Thomas; Sochat, Vanessa; | Nature communications. | 2015; | 26648521 | |
| Olfactory sensory neurons transiently express multiple olfactory receptors during development. | Tan, Longzhi; Li, Qian; Xie, X Sunney | Molecular systems biology. | 2015 Dec; | 26646940 | |
| The structure and timescales of heat perception in larval zebrafish. | Haesemeyer, Martin; Robson, Drew N; Li, Jennifer M; Schier, Alexander F; Engert, Florian | Cell systems. | 2015 Nov 25; | 338-348 | 26640823 |
| Systematic comparison of variant calling pipelines using gold standard personal exome variants. | Hwang, Sohyun; Kim, Eiru; Lee, Insuk; Marcotte, Edward M | Scientific reports. | 2015; | 26639839 | |
| The African Turquoise Killifish Genome Provides Insights into Evolution and Genetic Architecture of Lifespan. | Valenzano, Dario Riccardo; Benayoun, Bérénice A; Singh, Param Priya; Zhang, Elisa; Etter, Paul D; Hu, Chi-Kuo; Clément-Ziza, Mathieu; Willemsen, David; Cui, Rongfeng; Harel, Itamar; Machado, Ben E; Yee, Muh-Ching; Sharp, Sabrina C; Bustamante, Carlos D; Beyer, Andreas; Johnson, Eric A; Brunet, Anne | Cell. | 2015 Dec 3; | 1539-54 | 26638078 |
| Image-based Reconstruction of 3D Myocardial Infarct Geometry for Patient Specific Applications. | Ukwatta, Eranga; Rajchl, Martin; White, James; Pashakhanloo, Farhad; Herzka, Daniel A; McVeigh, Elliot; Lardo, Albert C; Trayanova, Natalia; Vadakkumpadan, Fijoy | Proceedings of SPIE--the International Society for Optical Engineering. | 2015 Feb 21; | 26633913 | |
| Enzyme-Mediated Modification of Single-Domain Antibodies for Imaging Modalities with Different Characteristics. | Rashidian, Mohammad; Wang, Lu; Edens, Jerre G; Jacobsen, Johanne T; Hossain, Intekhab; Wang, Qifan; Victora, Gabriel D; Vasdev, Neil; Ploegh, Hidde; Liang, Steven H | Angewandte Chemie (International ed. in English). | 2016 Jan 11; | 26630549 | |
| Understanding Programming of Fungal Iterative Polyketide Synthases: The Biochemical Basis for Regioselectivity by the Methyltransferase Domain in the Lovastatin Megasynthase. | Cacho, Ralph A; Thuss, Justin; Xu, Wei; Sanichar, Randy; Gao, Zhizeng; Nguyen, Allison; Vederas, John C; Tang, Yi | Journal of the American Chemical Society. | 2015 Dec 23; | 26630357 | |
| Rationally engineered Cas9 nucleases with improved specificity. | Slaymaker, Ian M; Gao, Linyi; Zetsche, Bernd; Scott, David A; Yan, Winston X; Zhang, Feng | Science (New York, N.Y.). | 2016 Jan 1; | 84-8 | 26628643 |
| How computer simulations of the human heart can improve anti-arrhythmia therapy. | Trayanova, Natalia A; Chang, Kelly C | The Journal of physiology. | 2016 May 1; | 26621489 | |
| Principles of connectivity among morphologically defined cell types in adult neocortex. | Jiang, Xiaolong; Shen, Shan; Cadwell, Cathryn R; Berens, Philipp; Sinz, Fabian; Ecker, Alexander S; Patel, Saumil; Tolias, Andreas S | Science (New York, N.Y.). | 2015 Nov 27; | aac9462 | 26612957 |
| Controlling AAV Tropism in the Nervous System with Natural and Engineered Capsids. | Castle, Michael J; Turunen, Heikki T; Vandenberghe, Luk H; Wolfe, John H | Methods in molecular biology (Clifton, N.J.). | 2016; | 133-49 | 26611584 |
| A minimal fate-selection switch. | Weinberger, Leor S | Current opinion in cell biology. | 2015 Dec; | 26611210 | |
| An Autogenously Regulated Expression System for Gene Therapeutic Ocular Applications. | Sochor, Matthew A; Vasireddy, Vidyullatha; Drivas, Theodore G; Wojno, Adam; Doung, Thu; Shpylchak, Ivan; Bennicelli, Jeannette; Chung, Daniel; Bennett, Jean; Lewis, Mitchell | Scientific reports. | 2015 Nov 24; | 26597678 | |
| Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems. | Shmakov, Sergey; Abudayyeh, Omar O; Makarova, Kira S; Wolf, Yuri I; Gootenberg, Jonathan S; Semenova, Ekaterina; Minakhin, Leonid; Joung, Julia; Konermann, Silvana; Severinov, Konstantin; Zhang, Feng; Koonin, Eugene V | Molecular cell. | 2015 Nov 5; | 385-97 | 26593719 |
| High-speed recording of neural spikes in awake mice and flies with a fluorescent voltage sensor. | Gong, Yiyang; Huang, Cheng; Li, Jin Zhong; Grewe, Benjamin F; Zhang, Yanping; Eismann, Stephan; Schnitzer, Mark J | Science (New York, N.Y.). | 2015 Dec 11; | 26586188 | |
| Theory in Biology: Figure 1 or Figure 7? | Phillips, Rob | Trends in cell biology. | 2015 Dec; | 723-9 | 26584768 |
| Scalable amplification of strand subsets from chip-synthesized oligonucleotide libraries. | Schmidt, Thorsten L; Beliveau, Brian J; Uca, Yavuz O; Theilmann, Mark; Da Cruz, Felipe; Wu, Chao-Ting; Shih, William M | Nature communications. | 2015; | 8634 | 26567534 |
| Bactericidal Antibiotics Induce Toxic Metabolic Perturbations that Lead to Cellular Damage. | Belenky, Peter; Ye, Jonathan D; Porter, Caroline B M; Cohen, Nadia R; Lobritz, Michael A; Ferrante, Thomas; Jain, Saloni; Korry, Benjamin J; Schwarz, Eric G; Walker, Graham C; Collins, James J | Cell reports. | 2015 Nov 3; | 968-80 | 26565910 |
| Defining Resistance and Tolerance to Cancer. | Dillman, Adler R; Schneider, David S | Cell reports. | 2015 Nov 3; | 884-7 | 26565901 |
| Variation in Taxonomic Composition of the Fecal Microbiota in an Inbred Mouse Strain across Individuals and Time. | Hoy, Yana Emmy; Bik, Elisabeth M; Lawley, Trevor D; Holmes, Susan P; Monack, Denise M; Theriot, Julie A; Relman, David A | PloS one. | 2015; | e0142825 | 26565698 |
| Evaluating Public Health Interventions: 1. Examples, Definitions, and a Personal Note. | Spiegelman, Donna | American journal of public health. | 2016 Jan; | 26562122 | |
| Composite Sequence-Structure Stability Models as Screening Tools for Identifying Vulnerable Targets for HIV Drug and Vaccine Development. | Manocheewa, Siriphan; Mittler, John E; Samudrala, Ram; Mullins, James I | Viruses. | 2015 Nov 04; | 26556362 | |
| Multiscale photoacoustic tomography using reversibly switchable bacterial phytochrome as a near-infrared photochromic probe. | Yao, Junjie; Kaberniuk, Andrii A; Li, Lei; Shcherbakova, Daria M; Zhang, Ruiying; Wang, Lidai; Li, Guo; Verkhusha, Vladislav V; Wang, Lihong V | Nature methods. | 2016 Jan; | 67-73 | 26550774 |
| Convergence and Stability of a Class of Iteratively Re-weighted Least Squares Algorithms for Sparse Signal Recovery in the Presence of Noise. | Babadi, Behtash; Ba, Demba; Purdon, Patrick L; Brown, Emery N | IEEE transactions on signal processing : a publication of the IEEE Signal Processing Society. | 2013 Oct 30; | 183-195 | 26549965 |
| Convergent evolution of marine mammals is associated with distinct substitutions in common genes. | Zhou, Xuming; Seim, Inge; Gladyshev, Vadim N | Scientific reports. | 2015; | 16550 | 26549748 |
| Organization of the Mammalian Ionome According to Organ Origin, Lineage Specialization, and Longevity. | Ma, Siming; Lee, Sang-Goo; Kim, Eun Bae; Park, Thomas J; Seluanov, Andrei; Gorbunova, Vera; Buffenstein, Rochelle; Seravalli, Javier; Gladyshev, Vadim N | Cell reports. | 2015 Nov 17; | 1319-26 | 26549444 |
| Lift NIH restrictions on chimera research. | Sharma, Arun; Sebastiano, Vittorio; Scott, Christopher T; Magnus, David; Koyano-Nakagawa, Naoko; Garry, Daniel J; Witte, Owen N; Nakauchi, Hiromitsu; Wu, Joseph C; Weissman, Irving L; Wu, Sean M | Science (New York, N.Y.). | 2015 Nov 6; | 26542560 | |
| MouseNet v2: a database of gene networks for studying the laboratory mouse and eight other model vertebrates. | Kim, Eiru; Hwang, Sohyun; Kim, Hyojin; Shim, Hongseok; Kang, Byunghee; Yang, Sunmo; Shim, Jae Ho; Shin, Seung Yeon; Marcotte, Edward M; Lee, Insuk | Nucleic acids research. | 2016 Jan 4; | 26527726 | |
| Bessel-beam Grueneisen relaxation photoacoustic microscopy with extended depth of field. | Shi, Junhui; Wang, Lidai; Noordam, Cedric; Wang, Lihong V | Journal of biomedical optics. | 2015 Nov; | 116002 | 26524679 |
| Broadening the targeting range of Staphylococcus aureus CRISPR-Cas9 by modifying PAM recognition. | Kleinstiver, Benjamin P; Prew, Michelle S; Tsai, Shengdar Q; Nguyen, Nhu T; Topkar, Ved V; Zheng, Zongli; Joung, J Keith | Nature biotechnology. | 2015 Dec; | 1293-1298 | 26524662 |
| Fixed single-cell transcriptomic characterization of human radial glial diversity. | Thomsen, Elliot R; Mich, John K; Yao, Zizhen; Hodge, Rebecca D; Doyle, Adele M; Jang, Sumin; Shehata, Soraya I; Nelson, Angelique M; Shapovalova, Nadiya V; Levi, Boaz P; Ramanathan, Sharad | Nature methods. | 2016 Jan; | 87-93 | 26524239 |
| Cuffing-based photoacoustic flowmetry in humans in the optical diffusive regime. | Zhou, Yong; Liang, Jinyang; Wang, Lihong V | Journal of biophotonics. | 2016 Mar; | 208-12 | 26515158 |
| Dual-Modality Photoacoustic and Ultrasound Imaging System for Noninvasive Sentinel Lymph Node Detection in Patients with Breast Cancer. | Garcia-Uribe, Alejandro; Erpelding, Todd N; Krumholz, Arie; Ke, Haixin; Maslov, Konstantin; Appleton, Catherine; Margenthaler, Julie A; Wang, Lihong V | Scientific reports. | 2015; | 15748 | 26510774 |
| Intrinsic Antimicrobial Resistance Determinants in the Superbug Pseudomonas aeruginosa. | Murray, Justine L; Kwon, Taejoon; Marcotte, Edward M; Whiteley, Marvin | mBio. | 2015; | 26507235 | |
| Encrypted Three-dimensional Dynamic Imaging using Snapshot Time-of-flight Compressed Ultrafast Photography. | Liang, Jinyang; Gao, Liang; Hai, Pengfei; Li, Chiye; Wang, Lihong V | Scientific reports. | 2015; | 15504 | 26503834 |
| Can Sibling Sex Ratios Be Used as a Valid Test for the Prenatal Androgen Hypothesis of Autism Spectrum Disorders? | Cheslack-Postava, Keely; Susser, Ezra; Liu, Kayuet; Bearman, Peter S | PloS one. | 2015; | e0141338 | 26495967 |
| Comparison of 10,11-Dehydrocurvularin Polyketide Synthases from Alternaria cinerariae and Aspergillus terreus Highlights Key Structural Motifs. | Cochrane, Rachel V K; Gao, Zhizeng; Lambkin, Gareth R; Xu, Wei; Winter, Jaclyn M; Marcus, Sandra L; Tang, Yi; Vederas, John C | Chembiochem : a European journal of chemical biology. | 2015 Nov; | 26493380 | |
| Efficient delivery of nuclease proteins for genome editing in human stem cells and primary cells. | Liu, Jia; Gaj, Thomas; Yang, Yifeng; Wang, Nan; Shui, Sailan; Kim, Sojung; Kanchiswamy, Chidananda Nagamangala; Kim, Jin-Soo; Barbas 3rd, Carlos F | Nature protocols. | 2015 Nov; | 1842-59 | 26492140 |
| On testing neural network models. | Yuste, Rafael | Nature reviews. Neuroscience. | 2015 Dec; | 26486185 | |
| Poreless eggshells. | Lin, Haifan; Matzuk, Martin M | The Journal of clinical investigation. | 2015 Nov 2; | 4005-7 | 26485282 |
| A National Network of Neurotechnology Centers for the BRAIN Initiative. | Alivisatos, A Paul; Chun, Miyoung; Church, George M; Greenspan, Ralph J; Roukes, Michael L; Yuste, Rafael | Neuron. | 2015 Nov 4; | 26481036 | |
| Graphene Oxide Nanosheets Modified with Single-Domain Antibodies for Rapid and Efficient Capture of Cells. | Chen, Guan-Yu; Li, Zeyang; Theile, Christopher S; Bardhan, Neelkanth M; Kumar, Priyank V; Duarte, Joao N; Maruyama, Takeshi; Rashidfarrokh, Ali; Belcher, Angela M; Ploegh, Hidde L | Chemistry (Weinheim an der Bergstrasse, Germany). | 2015 Nov 23; | 26472062 | |
| Seeing Through the Surface: Non-invasive Characterization of Biomaterial-Tissue Interactions Using Photoacoustic Microscopy. | Zhang, Yu Shrike; Wang, Lihong V; Xia, Younan | Annals of biomedical engineering. | 2015 Oct 15; | 26471785 | |
| Discovery of Unclustered Fungal Indole Diterpene Biosynthetic Pathways through Combinatorial Pathway Reassembly in Engineered Yeast. | Tang, Man-Cheng; Lin, Hsiao-Ching; Li, Dehai; Zou, Yi; Li, Jian; Xu, Wei; Cacho, Ralph A; Hillenmeyer, Maureen E; Garg, Neil K; Tang, Yi | Journal of the American Chemical Society. | 2015 Nov 4; | 13724-7 | 26469304 |
| On the problem of boundaries and scaling for urban street networks. | Masucci, A Paolo; Arcaute, Elsa; Hatna, Erez; Stanilov, Kiril; Batty, Michael | Journal of the Royal Society, Interface / the Royal Society. | 2015 Oct 6; | 20150763 | 26468071 |
| Common variants in DRD2 are associated with sleep duration: the CARe consortium. | Cade, Brian E; Gottlieb, Daniel J; Lauderdale, Diane S; Bennett, David A; Buchman, Aron S; Buxbaum, Sarah G; De Jager, Philip L; Evans, Daniel S; Fülöp, Tibor; Gharib, Sina A; Johnson, W Craig; Kim, Hyun; Larkin, Emma K; Lee, Seung Ku; Lim, Andrew S; Punjabi, Naresh M; Shin, Chol; Stone, Katie L; Tranah, Gregory J; Weng, Jia; Yaffe, Kristine; Zee, Phyllis C; Patel, Sanjay R; Zhu, Xiaofeng; Redline, Susan; Saxena, Richa | Human molecular genetics. | 2016 Jan 1; | 167-79 | 26464489 |
| Efforts to make and apply humanized yeast. | Laurent, Jon M; Young, Jonathan H; Kachroo, Aashiq H; Marcotte, Edward M | Briefings in functional genomics. | 2016 Mar; | 26462863 | |
| Working memory capacity is associated with optimal adaptation of response bias to perceptual sensitivity in emotion perception. | Lynn, Spencer K; Ibagon, Camila; Bui, Eric; Palitz, Sophie A; Simon, Naomi M; Barrett, Lisa Feldman | Emotion (Washington, D.C.). | 2016 Mar; | 26461251 | |
| Microbiota-Dependent Sequelae of Acute Infection Compromise Tissue-Specific Immunity. | Fonseca, Denise Morais da; Hand, Timothy W; Han, Seong-Ji; Gerner, Michael Y; Glatman Zaretsky, Arielle; Byrd, Allyson L; Harrison, Oliver J; Ortiz, Alexandra M; Quinones, Mariam; Trinchieri, Giorgio; Brenchley, Jason M; Brodsky, Igor E; Germain, Ronald N | Cell. | 2015 Oct 8; | 26451485 | |
| Maternal Ube3a Loss Disrupts Sleep Homeostasis But Leaves Circadian Rhythmicity Largely Intact. | Ehlen, J Christopher; Jones, Kelly A; Pinckney, Lennisha; Gray, Cloe L; Burette, Susan; Weinberg, Richard J; Evans, Jennifer A; Brager, Allison J; Zylka, Mark J; Paul, Ketema N; Philpot, Benjamin D; DeBruyne, Jason P | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2015 Oct 07; | 26446213 | |
| The molecular constituents of the blood-brain barrier. | Chow, Brian Wai; Gu, Chenghua | Trends in neurosciences. | 2015 Oct; | 598-608 | 26442694 |
| A New MRI-Based Model of Heart Function with Coupled Hemodynamics and Application to Normal and Diseased Canine Left Ventricles. | Choi, Young Joon; Constantino, Jason; Vedula, Vijay; Trayanova, Natalia; Mittal, Rajat | Frontiers in bioengineering and biotechnology. | 2015; | 26442254 | |
| Lipid Profiles and Signals for Long Life. | Schroeder, Elizabeth A; Brunet, Anne | Trends in endocrinology and metabolism: TEM. | 2015 Nov; | 589-92 | 26439976 |
| Drosophila melanogaster Natural Variation Affects Growth Dynamics of Infecting Listeria monocytogenes. | Hotson, Alejandra Guzmán; Schneider, David S | G3 (Bethesda, Md.). | 2015 Dec; | 26438294 | |
| Orthogonal gene knockout and activation with a catalytically active Cas9 nuclease. | Dahlman, James E; Abudayyeh, Omar O; Joung, Julia; Gootenberg, Jonathan S; Zhang, Feng; Konermann, Silvana | Nature biotechnology. | 2015 Nov; | 1159-61 | 26436575 |
| Models of hypoxia and ischemia-induced seizures. | Sun, Hongyu; Juul, Halvor M; Jensen, Frances E | Journal of neuroscience methods. | 2016 Feb 15; | 26434705 | |
| Genome Editing in Human Cells Using CRISPR/Cas Nucleases. | Wyvekens, Nicolas; Tsai, Shengdar Q; Joung, J Keith | Current protocols in molecular biology. | 2015 Oct 01; | 26423589 | |
| Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system. | Zetsche, Bernd; Gootenberg, Jonathan S; Abudayyeh, Omar O; Slaymaker, Ian M; Makarova, Kira S; Essletzbichler, Patrick; Volz, Sara E; Joung, Julia; van der Oost, John; Regev, Aviv; Koonin, Eugene V; Zhang, Feng | Cell. | 2015 Oct 22; | 759-71 | 26422227 |
| Cardioprotective Actions of TGF?RI Inhibition Through Stimulating Autocrine/Paracrine of Survivin and Inhibiting Wnt in Cardiac Progenitors. | Ho, Yu-Sian; Tsai, Wan-Hsuan; Lin, Fen-Chiung; Huang, Wei-Pang; Lin, Lung-Chun; Wu, Sean M; Liu, Yu-Ru; Chen, Wen-Pin | Stem cells (Dayton, Ohio). | 2015 Sep 29; | 26418219 | |
| Continuous Antigenic Stimulation of DO11.10 TCR Transgenic Mice in the Presence or Absence of IL-1?: Possible Implications for Mechanisms of T Cell Depletion in HIV Disease. | Ladell, Kristin; Hazenberg, Mette D; Fitch, Mark; Emson, Claire; McEvoy-Hein Asgarian, Bridget K; Mold, Jeff E; Miller, Corey; Busch, Robert; Price, David A; Hellerstein, Marc K; McCune, Joseph M | Journal of immunology (Baltimore, Md. : 1950). | 2015 Nov 1; | 4096-105 | 26416271 |
| Studying a Drug-like, RNA-Focused Small Molecule Library Identifies Compounds That Inhibit RNA Toxicity in Myotonic Dystrophy. | Rzuczek, Suzanne G; Southern, Mark R; Disney, Matthew D | ACS chemical biology. | 2015 Dec 18; | 26414664 | |
| In Vivo Evaluation of Adipose-Derived Stromal Cells Delivered with a Nanofiber Scaffold for Tendon-to-Bone Repair. | Lipner, Justin; Shen, Hua; Cavinatto, Leonardo; Liu, Wenying; Havlioglu, Necat; Xia, Younan; Galatz, Leesa M; Thomopoulos, Stavros | Tissue engineering. Part A. | 2015 Nov; | 2766-74 | 26414599 |
| Redesigning Recombinase Specificity for Safe Harbor Sites in the Human Genome. | Wallen, Mark C; Gaj, Thomas; Barbas 3rd, Carlos F | PloS one. | 2015; | e0139123 | 26414179 |
| AFFECT AND THE FRAMING EFFECT WITHIN INDIVIDUALS OVER TIME: RISK TAKING IN A DYNAMIC INVESTMENT SIMULATION. | Seo, Myeong-Gu; Goldfarb, Brent; Barrett, Lisa Feldman | Academy of Management journal. Academy of Management. | 2010 Apr; | 26412860 | |
| AgRP Neurons Regulate Bone Mass. | Kim, Jae Geun; Sun, Ben-Hua; Dietrich, Marcelo O; Koch, Marco; Yao, Gang-Qing; Diano, Sabrina; Insogna, Karl; Horvath, Tamas L | Cell reports. | 2015 Oct 6; | 14-Aug | 26411686 |
| The DNA damage response induces inflammation and senescence by inhibiting autophagy of GATA4. | Kang, Chanhee; Xu, Qikai; Martin, Timothy D; Li, Mamie Z; Demaria, Marco; Aron, Liviu; Lu, Tao; Yankner, Bruce A; Campisi, Judith; Elledge, Stephen J | Science (New York, N.Y.). | 2015 Sep 25; | aaa5612 | 26404840 |
| Stress weakens prefrontal networks: molecular insults to higher cognition. | Arnsten, Amy F T | Nature neuroscience. | 2015 Oct; | 1376-85 | 26404712 |
| Waking State: Rapid Variations Modulate Neural and Behavioral Responses. | McGinley, Matthew J; Vinck, Martin; Reimer, Jacob; Batista-Brito, Renata; Zagha, Edward; Cadwell, Cathryn R; Tolias, Andreas S; Cardin, Jessica A; McCormick, David A | Neuron. | 2015 Sep 23; | 1143-61 | 26402600 |
| CAUSEL: an epigenome- and genome-editing pipeline for establishing function of noncoding GWAS variants. | Spisák, Sándor; Lawrenson, Kate; Fu, Yanfang; Csabai, István; Cottman, Rebecca T; Seo, Ji-Heui; Haiman, Christopher; Han, Ying; Lenci, Romina; Li, Qiyuan; Tisza, Viktória; Szállási, Zoltán; Herbert, Zachery T; Chabot, Matthew; Pomerantz, Mark; Solymosi, Norbert; GAME-ON/ELLIPSE Consortium; Gayther, Simon A; Joung, J Keith; Freedman, Matthew L | Nature medicine. | 2015 Nov; | 1357-63 | 26398868 |
| Heightened sensitivity to emotional expressions in generalised anxiety disorder, compared to social anxiety disorder, and controls. | Bui, Eric; Anderson, Eric; Goetter, Elizabeth M; Campbell, Allison A; Fischer, Laura E; Barrett, Lisa Feldman; Simon, Naomi M | Cognition & emotion. | 2017 Jan; | 26395075 | |
| A note on ''Design and analysis of stepped wedge cluster randomized trials''. | Liao, Xiaomei; Zhou, Xin; Spiegelman, Donna | Contemporary clinical trials. | 2015 Nov; | 26394003 | |
| A direct-to-drive neural data acquisition system. | Kinney, Justin P; Bernstein, Jacob G; Meyer, Andrew J; Barber, Jessica B; Bolivar, Marti; Newbold, Bryan; Scholvin, Jorg; Moore-Kochlacs, Caroline; Wentz, Christian T; Kopell, Nancy J; Boyden, Edward S | Frontiers in neural circuits. | 2015; | 26388740 | |
| Optimization of yeast-based production of medicinal protoberberine alkaloids. | Galanie, Stephanie; Smolke, Christina D | Microbial cell factories. | 2015; | 144 | 26376732 |
| BCL11A enhancer dissection by Cas9-mediated in situ saturating mutagenesis. | Canver, Matthew C; Smith, Elenoe C; Sher, Falak; Pinello, Luca; Sanjana, Neville E; Shalem, Ophir; Chen, Diane D; Schupp, Patrick G; Vinjamur, Divya S; Garcia, Sara P; Luc, Sidinh; Kurita, Ryo; Nakamura, Yukio; Fujiwara, Yuko; Maeda, Takahiro; Yuan, Guo-Cheng; Zhang, Feng; Orkin, Stuart H; Bauer, Daniel E | Nature. | 2015 Nov 12; | 192-7 | 26375006 |
| Epigenetic regulation of ageing: linking environmental inputs to genomic stability. | Benayoun, Bérénice A; Pollina, Elizabeth A; Brunet, Anne | Nature reviews. Molecular cell biology. | 2015 Oct; | 593-610 | 26373265 |
| Involvement of Lipocalin-like CghA in Decalin-Forming Stereoselective Intramolecular [4+2] Cycloaddition. | Sato, Michio; Yagishita, Fumitoshi; Mino, Takashi; Uchiyama, Nahoko; Patel, Ashay; Chooi, Yit-Heng; Goda, Yukihiro; Xu, Wei; Noguchi, Hiroshi; Yamamoto, Tsuyoshi; Hotta, Kinya; Houk, Kendall N; Tang, Yi; Watanabe, Kenji | Chembiochem : a European journal of chemical biology. | 2015 Nov; | 2294-8 | 26360642 |
| In Vitro Screening and in Silico Modeling of RNA-Based Gene Expression Control. | McKeague, Maureen; Wang, Yen-Hsiang; Smolke, Christina D | ACS chemical biology. | 2015 Nov 20; | 26359915 | |
| Mobile AMPARs are required for synaptic plasticity. | Hoerndli, Frédéric J; Kallarackal, Angy J; Maricq, Andres V | Channels (Austin, Tex.). | 2015; | 230-2 | 26359683 |
| Lack of correlation between reaction speed and analytical sensitivity in isothermal amplification reveals the value of digital methods for optimization: validation using digital real-time RT-LAMP. | Khorosheva, Eugenia M; Karymov, Mikhail A; Selck, David A; Ismagilov, Rustem F | Nucleic acids research. | 2016 Jan 29; | 26358811 | |
| Panorama of ancient metazoan macromolecular complexes. | Wan, Cuihong; Borgeson, Blake; Phanse, Sadhna; Tu, Fan; Drew, Kevin; Clark, Greg; Xiong, Xuejian; Kagan, Olga; Kwan, Julian; Bezginov, Alexandr; Chessman, Kyle; Pal, Swati; Cromar, Graham; Papoulas, Ophelia; Ni, Zuyao; Boutz, Daniel R; Stoilova, Snejana; | Nature. | 2015 Sep 17; | 26344197 | |
| N(6)-Methyladenosine Modification in a Long Noncoding RNA Hairpin Predisposes Its Conformation to Protein Binding. | Zhou, Katherine I; Parisien, Marc; Dai, Qing; Liu, Nian; Diatchenko, Luda; Sachleben, Joseph R; Pan, Tao | Journal of molecular biology. | 2015 Sep 4; | 26343757 | |
| Efficient Biosynthesis of Fungal Polyketides Containing the Dioxabicyclo-octane Ring System. | Mao, Xu-Ming; Zhan, Zha-Jun; Grayson, Matthew N; Tang, Man-Cheng; Xu, Wei; Li, Yong-Quan; Yin, Wen-Bing; Lin, Hsiao-Ching; Chooi, Yit-Heng; Houk, K N; Tang, Yi | Journal of the American Chemical Society. | 2015 Sep 23; | 11904-7 | 26340065 |
| Applications of comparative evolution to human disease genetics. | McWhite, Claire D; Liebeskind, Benjamin J; Marcotte, Edward M | Current opinion in genetics & development. | 2015 Dec; | 26338499 | |
| Enhanced Human Epidermal Growth Factor Receptor 2 Degradation in Breast Cancer Cells by Lysosome-Targeting Gold Nanoconstructs. | Lee, Hyojin; Dam, Duncan Hieu M; Ha, Ji Won; Yue, Jun; Odom, Teri W | ACS nano. | 2015 Oct 27; | 26335372 | |
| Members Only: Hypoxia-Induced Cell-Cycle Activation in Cardiomyocytes. | Sharma, Arun; Wu, Sean M | Cell metabolism. | 2015 Sep 1; | 365-6 | 26331604 |
| Harnessing the Induction of Cardiomyocyte Proliferation for Cardiac Regenerative Medicine. | Sharma, Arun; Zhang, Yuan; Wu, Sean M | Current treatment options in cardiovascular medicine. | 2015 Oct; | 404 | 26324824 |
| Integrin Based Isolation Enables Purification of Murine Lineage Committed Cardiomyocytes. | Tarnawski, Laura; Xian, Xiaojie; Monnerat, Gustavo; Macaulay, Iain C; Malan, Daniela; Borgman, Andrew; Wu, Sean M; Fleischmann, Bernd K; Jovinge, Stefan | PloS one. | 2015; | e0135880 | 26323090 |
| Crystal Structure of Staphylococcus aureus Cas9. | Nishimasu, Hiroshi; Cong, Le; Yan, Winston X; Ran, F Ann; Zetsche, Bernd; Li, Yinqing; Kurabayashi, Arisa; Ishitani, Ryuichiro; Zhang, Feng; Nureki, Osamu | Cell. | 2015 Aug 27; | 1113-26 | 26317473 |
| Allosteric activation of apicomplexan calcium-dependent protein kinases. | Ingram, Jessica R; Knockenhauer, Kevin E; Markus, Benedikt M; Mandelbaum, Joseph; Ramek, Alexander; Shan, Yibing; Shaw, David E; Schwartz, Thomas U; Ploegh, Hidde L; Lourido, Sebastian | Proceedings of the National Academy of Sciences of the United States of America. | 2015 Sep 8; | E4975-84 | 26305940 |
| Trajectories of cell-cycle progression from fixed cell populations. | Gut, Gabriele; Tadmor, Michelle D; Pe'er, Dana; Pelkmans, Lucas; Liberali, Prisca | Nature methods. | 2015 Oct; | 26301842 | |
| Gold Nanomaterials at Work in Biomedicine. | Yang, Xuan; Yang, Miaoxin; Pang, Bo; Vara, Madeline; Xia, Younan | Chemical reviews. | 2015 Oct 14; | 10410-88 | 26293344 |
| Structured Variability in Purkinje Cell Activity during Locomotion. | Sauerbrei, Britton A; Lubenov, Evgueniy V; Siapas, Athanassios G | Neuron. | 2015 Aug 19; | 840-52 | 26291165 |
| In reply. | Purdon, Patrick L; Zhou, David W; Akeju, Oluwaseun; Brown, Emery N | Anesthesiology. | 2015 Sep; | 725-8 | 26284863 |
| Controlled Measurement and Comparative Analysis of Cellular Components in E. coli Reveals Broad Regulatory Changes in Response to Glucose Starvation. | Houser, John R; Barnhart, Craig; Boutz, Daniel R; Carroll, Sean M; Dasgupta, Aurko; Michener, Joshua K; Needham, Brittany D; Papoulas, Ophelia; Sridhara, Viswanadham; Sydykova, Dariya K; Marx, Christopher J; Trent, M Stephen; Barrick, Jeffrey E; Marcotte, | PLoS computational biology. | 2015 Aug; | 26275208 | |
| Clinical Electroencephalography for Anesthesiologists: Part I: Background and Basic Signatures. | Purdon, Patrick L; Sampson, Aaron; Pavone, Kara J; Brown, Emery N | Anesthesiology. | 2015 Aug 14; | 26275092 | |
| Complete biosynthesis of opioids in yeast. | Galanie, Stephanie; Thodey, Kate; Trenchard, Isis J; Filsinger Interrante, Maria; Smolke, Christina D | Science (New York, N.Y.). | 2015 Sep 4; | 1095-100 | 26272907 |
| A wireless transmission neural interface system for unconstrained non-human primates. | Fernandez-Leon, Jose A; Parajuli, Arun; Franklin, Robert; Sorenson, Michael; Felleman, Daniel J; Hansen, Bryan J; Hu, Ming; Dragoi, Valentin | Journal of neural engineering. | 2015 Oct; | 26269496 | |
| Exposure to SIV in utero results in reduced viral loads and altered responsiveness to postnatal challenge. | Baker, Chris A R; Swainson, Louise; Lin, Din L; Wong, Samson; Hartigan-O'Connor, Dennis J; Lifson, Jeffrey D; Tarantal, Alice F; McCune, Joseph M | Science translational medicine. | 2015 Aug 12; | 300ra125 | 26268312 |
| A PK-PD model of ketamine-induced high-frequency oscillations. | Flores, Francisco J; Ching, ShiNung; Hartnack, Katharine; Fath, Amanda B; Purdon, Patrick L; Wilson, Matthew A; Brown, Emery N | Journal of neural engineering. | 2015 Oct; | 56006 | 26268223 |
| In vivo photoacoustic flowmetry at depths of the diffusive regime based on saline injection. | Zhou, Yong; Poudel, Joemini; Li, Guo; Wang, Lihong V | Journal of biomedical optics. | 2015 Aug; | 87001 | 26267364 |
| Methodological recommendations for a heartbeat detection-based measure of interoceptive sensitivity. | Kleckner, Ian R; Wormwood, Jolie Baumann; Simmons, W Kyle; Barrett, Lisa Feldman; Quigley, Karen S | Psychophysiology. | 2015 Nov; | 26265009 | |
| High-throughput cellular RNA device engineering. | Townshend, Brent; Kennedy, Andrew B; Xiang, Joy S; Smolke, Christina D | Nature methods. | 2015 Oct; | 989-94 | 26258292 |
| An Autism-Linked Mutation Disables Phosphorylation Control of UBE3A. | Yi, Jason J; Berrios, Janet; Newbern, Jason M; Snider, William D; Philpot, Benjamin D; Hahn, Klaus M; Zylka, Mark J | Cell. | 2015 Aug 13; | 795-807 | 26255772 |
| Fluorophore-Conjugated Holliday Junctions for Generating Super-Bright Antibodies and Antibody Fragments. | Li, Zeyang; Theile, Christopher S; Chen, Guan-Yu; Bilate, Angelina M; Duarte, Joao N; Avalos, Ana M; Fang, Tao; Barberena, Roberto; Sato, Shuji; Ploegh, Hidde L | Angewandte Chemie (International ed. in English). | 2015 Sep 28; | 26252716 | |
| Organization of the Mammalian Metabolome according to Organ Function, Lineage Specialization, and Longevity. | Ma, Siming; Yim, Sun Hee; Lee, Sang-Goo; Kim, Eun Bae; Lee, Sang-Rae; Chang, Kyu-Tae; Buffenstein, Rochelle; Lewis, Kaitlyn N; Park, Thomas J; Miller, Richard A; Clish, Clary B; Gladyshev, Vadim N | Cell metabolism. | 2015 Aug 4; | 332-43 | 26244935 |
| Dysregulation of FMRP/mTOR Signaling Cascade in Hypoxic-Ischemic Injury of Premature Human Brain. | Lechpammer, Mirna; Wintermark, Pia; Merry, Katherine M; Jackson, Michele C; Jantzie, Lauren L; Jensen, Frances E | Journal of child neurology. | 2015 Aug 3; | 26239490 | |
| High-throughput determination of RNA structure by proximity ligation. | Ramani, Vijay; Qiu, Ruolan; Shendure, Jay | Nature biotechnology. | 2015 Sep; | 980-4 | 26237516 |
| In Silico Reconstruction of the Viral Evolutionary Lineage Yields a Potent Gene Therapy Vector. | Zinn, Eric; Pacouret, Simon; Khaychuk, Vadim; Turunen, Heikki T; Carvalho, Livia S; Andres-Mateos, Eva; Shah, Samiksha; Shelke, Rajani; Maurer, Anna C; Plovie, Eva; Xiao, Ru; Vandenberghe, Luk H | Cell reports. | 2015 Aug 11; | 1056-68 | 26235624 |
| Image-based reconstruction of three-dimensional myocardial infarct geometry for patient-specific modeling of cardiac electrophysiology. | Ukwatta, Eranga; Arevalo, Hermenegild; Rajchl, Martin; White, James; Pashakhanloo, Farhad; Prakosa, Adityo; Herzka, Daniel A; McVeigh, Elliot; Lardo, Albert C; Trayanova, Natalia A; Vadakkumpadan, Fijoy | Medical physics. | 2015 Aug; | 26233186 | |
| PIKfyve mediates the motility of late endosomes and lysosomes in neuronal dendrites. | Tsuruta, Fuminori; Dolmetsch, Ricardo E | Neuroscience letters. | 2015 Jul 29; | 18-23 | 26232680 |
| Decision making from economic and signal detection perspectives: development of an integrated framework. | Lynn, Spencer K; Wormwood, Jolie B; Barrett, Lisa F; Quigley, Karen S | Frontiers in psychology. | 2015; | 26217275 | |
| Efficient and quantitative high-throughput tRNA sequencing. | Zheng, Guanqun; Qin, Yidan; Clark, Wesley C; Dai, Qing; Yi, Chengqi; He, Chuan; Lambowitz, Alan M; Pan, Tao | Nature methods. | 2015 Sep; | 835-7 | 26214130 |
| Chemoenzymatic syntheses of water-soluble lipid I fluorescent probes. | Mitachi, Katsuhiko; Siricilla, Shajila; Klaic, Lada; Clemons Jr, William M; Kurosu, Michio | Tetrahedron letters. | 2015 Jun 3; | 3441-3446 | 26190869 |
| A Genome-wide CRISPR Screen in Primary Immune Cells to Dissect Regulatory Networks. | Parnas, Oren; Jovanovic, Marko; Eisenhaure, Thomas M; Herbst, Rebecca H; Dixit, Atray; Ye, Chun Jimmie; Przybylski, Dariusz; Platt, Randall J; Tirosh, Itay; Sanjana, Neville E; Shalem, Ophir; Satija, Rahul; Raychowdhury, Raktima; Mertins, Philipp; Carr, Steven A; Zhang, Feng; Hacohen, Nir; Regev, Aviv | Cell. | 2015 Jul 30; | 675-86 | 26189680 |
| Cortical and thalamic contributions to response dynamics across layers of the primary somatosensory cortex during tactile discrimination. | Pais-Vieira, Miguel; Kunicki, Carolina; Tseng, Po-He; Martin, Joel; Lebedev, Mikhail; Nicolelis, Miguel A L | Journal of neurophysiology. | 2015 Sep; | 1652-76 | 26180115 |
| Plasticity of the human visual system after retinal gene therapy in patients with Leber's congenital amaurosis. | Ashtari, Manzar; Zhang, Hui; Cook, Philip A; Cyckowski, Laura L; Shindler, Kenneth S; Marshall, Kathleen A; Aravand, Puya; Vossough, Arastoo; Gee, James C; Maguire, Albert M; Baker, Chris I; Bennett, Jean | Science translational medicine. | 2015 Jul 15; | 296ra110 | 26180100 |
| The neural representation of typical and atypical experiences of negative images: comparing fear, disgust and morbid fascination. | Oosterwijk, Suzanne; Lindquist, Kristen A; Adebayo, Morenikeji; Barrett, Lisa Feldman | Social cognitive and affective neuroscience. | 2016 Jan; | 26180088 | |
| CRISPR-Cas9: Prospects and Challenges. | Zhang, Feng | Human gene therapy. | 2015 Jul; | 26176430 | |
| Age-dependency of sevoflurane-induced electroencephalogram dynamics in children. | Akeju, O; Pavone, K J; Thum, J A; Firth, P G; Westover, M B; Puglia, M; Shank, E S; Brown, E N; Purdon, P L | British journal of anaesthesia. | 2015 Jul; | i66-i76 | 26174303 |
| Ageing delays emergence from general anaesthesia in rats by increasing anaesthetic sensitivity in the brain. | Chemali, J J; Kenny, J D; Olutola, O; Taylor, N E; Kimchi, E Y; Purdon, P L; Brown, E N; Solt, K | British journal of anaesthesia. | 2015 Jul; | i58-i65 | 26174302 |
| Biochemical and Structural Basis for Controlling Chemical Modularity in Fungal Polyketide Biosynthesis. | Winter, Jaclyn M; Cascio, Duilio; Dietrich, David; Sato, Michio; Watanabe, Kenji; Sawaya, Michael R; Vederas, John C; Tang, Yi | Journal of the American Chemical Society. | 2015 Aug 12; | 9885-93 | 26172141 |
| Focal Points, Endogenous Processes, and Exogenous Shocks in the Autism Epidemic. | Liu, Kayuet; Bearman, Peter S | Sociological methods & research. | 2015 May 1; | 272-305 | 26166907 |
| De novo production of the key branch point benzylisoquinoline alkaloid reticuline in yeast. | Trenchard, Isis J; Siddiqui, Michael S; Thodey, Kate; Smolke, Christina D | Metabolic engineering. | 2015 Jul 10; | 74-83 | 26166409 |
| Building an organic computing device with multiple interconnected brains. | Pais-Vieira, Miguel; Chiuffa, Gabriela; Lebedev, Mikhail; Yadav, Amol; Nicolelis, Miguel A L | Scientific reports. | 2015; | 11869 | 26158615 |
| Computing Arm Movements with a Monkey Brainet. | Ramakrishnan, Arjun; Ifft, Peter J; Pais-Vieira, Miguel; Byun, Yoon Woo; Zhuang, Katie Z; Lebedev, Mikhail A; Nicolelis, Miguel A L | Scientific reports. | 2015; | 10767 | 26158523 |
| Its preferential interactions with biopolymers account for diverse observed effects of trehalose. | Hong, Jiang; Gierasch, Lila M; Liu, Zhicheng | Biophysical journal. | 2015 Jul 7; | 144-53 | 26153711 |
| From the neuron doctrine to neural networks. | Yuste, Rafael | Nature reviews. Neuroscience. | 2015 Aug; | 26152865 | |
| Reference-free removal of EEG-fMRI ballistocardiogram artifacts with harmonic regression. | Krishnaswamy, Pavitra; Bonmassar, Giorgio; Poulsen, Catherine; Pierce, Eric T; Purdon, Patrick L; Brown, Emery N | NeuroImage. | 2015 Jul 5; | 26151100 | |
| The evolving capabilities of rhodopsin-based genetically encoded voltage indicators. | Gong, Yiyang | Current opinion in chemical biology. | 2015 Aug; | 84-9 | 26143170 |
| Piwi Is a Key Regulator of Both Somatic and Germline Stem Cells in the Drosophila Testis. | Gonzalez, Jacob; Qi, Hongying; Liu, Na; Lin, Haifan | Cell reports. | 2015 Jul 7; | 150-61 | 26119740 |
| Nitrous oxide-induced slow and delta oscillations. | Pavone, Kara J; Akeju, Oluwaseun; Sampson, Aaron L; Ling, Kelly; Purdon, Patrick L; Brown, Emery N | Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. | 2015 Jun 10; | 26118489 | |
| Control of cerebrovascular patterning by neural activity during postnatal development. | Lacoste, Baptiste; Gu, Chenghua | Mechanisms of development. | 2015 Nov; | 43-9 | 26116138 |
| Multiview Hilbert transformation for full-view photoacoustic computed tomography using a linear array. | Li, Guo; Li, Lei; Zhu, Liren; Xia, Jun; Wang, Lihong V | Journal of biomedical optics. | 2015 Jun; | 26112369 | |
| A shift in perspective: Decentering through mindful attention to imagined stressful events. | Lebois, Lauren A M; Papies, Esther K; Gopinath, Kaundinya; Cabanban, Romeo; Quigley, Karen S; Krishnamurthy, Venkatagiri; Barrett, Lisa Feldman; Barsalou, Lawrence W | Neuropsychologia. | 2015 Aug; | 26111487 | |
| A high-throughput assay for quantifying appetite and digestive dynamics. | Jordi, Josua; Guggiana-Nilo, Drago; Soucy, Edward; Song, Erin Yue; Lei Wee, Caroline; Engert, Florian | American journal of physiology. Regulatory, integrative and comparative physiology. | 2015 Aug 15; | 26108871 | |
| Diversity of astrocyte functions and phenotypes in neural circuits. | Khakh, Baljit S; Sofroniew, Michael V | Nature neuroscience. | 2015 Jul; | 26108722 | |
| Dopamine's Actions in Primate Prefrontal Cortex: Challenges for Treating Cognitive Disorders. | Arnsten, Amy F T; Wang, Min; Paspalas, Constantinos D | Pharmacological reviews. | 2015 Jul; | 681-96 | 26106146 |
| Brain network connectivity-behavioral relationships exhibit trait-like properties: Evidence from hippocampal connectivity and memory. | Touroutoglou, Alexandra; Andreano, Joseph M; Barrett, Lisa Feldman; Dickerson, Bradford C | Hippocampus. | 2015 Dec; | 26105075 | |
| Antibiotic efficacy is linked to bacterial cellular respiration. | Lobritz, Michael A; Belenky, Peter; Porter, Caroline B M; Gutierrez, Arnaud; Yang, Jason H; Schwarz, Eric G; Dwyer, Daniel J; Khalil, Ahmad S; Collins, James J | Proceedings of the National Academy of Sciences of the United States of America. | 2015 Jul 7; | 8173-80 | 26100898 |
| A cationic cysteine-hydrazide as an enrichment tool for the mass spectrometric characterization of bacterial free oligosaccharides. | Jang, Kyoung-Soon; Nani, Roger R; Kalli, Anastasia; Levin, Sergiy; Müller, Axel; Hess, Sonja; Reisman, Sarah E; Clemons Jr, William M | Analytical and bioanalytical chemistry. | 2015 Aug; | 6181-90 | 26100547 |
| Engineered CRISPR-Cas9 nucleases with altered PAM specificities. | Kleinstiver, Benjamin P; Prew, Michelle S; Tsai, Shengdar Q; Topkar, Ved V; Nguyen, Nhu T; Zheng, Zongli; Gonzales, Andrew P W; Li, Zhuyun; Peterson, Randall T; Yeh, Jing-Ruey Joanna; Aryee, Martin J; Joung, J Keith | Nature. | 2015 Jul 23; | 481-5 | 26098369 |
| Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis. | Levine, Jacob H; Simonds, Erin F; Bendall, Sean C; Davis, Kara L; Amir, El-ad D; Tadmor, Michelle D; Litvin, Oren; Fienberg, Harris G; Jager, Astraea; Zunder, Eli R; Finck, Rachel; Gedman, Amanda L; Radtke, Ina; Downing, James R; Pe'er, Dana; Nolan, Garry | Cell. | 2015 Jul 2; | 184-97 | 26095251 |
| Quantitative two-photon imaging of fluorescent biosensors. | Yellen, Gary; Mongeon, Rebecca | Current opinion in chemical biology. | 2015 Jun 12; | 24-30 | 26079046 |
| Single-Cell Whole-Genome Amplification and Sequencing: Methodology and Applications. | Huang, Lei; Ma, Fei; Chapman, Alec; Lu, Sijia; Xie, Xiaoliang Sunney | Annual review of genomics and human genetics. | 2015; | 79-102 | 26077818 |
| Iron Toxicity in the Retina Requires Alu RNA and the NLRP3 Inflammasome. | Gelfand, Bradley D; Wright, Charles B; Kim, Younghee; Yasuma, Tetsuhiro; Yasuma, Reo; Li, Shengjian; Fowler, Benjamin J; Bastos-Carvalho, Ana; Kerur, Nagaraj; Uittenbogaard, Annette; Han, Youn Seon; Lou, Dingyuan; Kleinman, Mark E; McDonald, W Hayes; Núñez, Gabriel; Georgel, Philippe; Dunaief, Joshua L; Ambati, Jayakrishna | Cell reports. | 2015 Jun 23; | 1686-93 | 26074074 |
| Ultra-large field-of-view two-photon microscopy. | Tsai, Philbert S; Mateo, Celine; Field, Jeffrey J; Schaffer, Chris B; Anderson, Matthew E; Kleinfeld, David | Optics express. | 2015 Jun 1; | 13833-47 | 26072755 |
| Endogenous sequential cortical activity evoked by visual stimuli. | Carrillo-Reid, Luis; Miller, Jae-Eun Kang; Hamm, Jordan P; Jackson, Jesse; Yuste, Rafael | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2015 Jun 10; | 26063915 | |
| Sequence determinants of improved CRISPR sgRNA design. | Xu, Han; Xiao, Tengfei; Chen, Chen-Hao; Li, Wei; Meyer, Clifford A; Wu, Qiu; Wu, Di; Cong, Le; Zhang, Feng; Liu, Jun S; Brown, Myles; Liu, X Shirley | Genome research. | 2015 Aug; | 26063738 | |
| Basal exon skipping and genetic pleiotropy: A predictive model of disease pathogenesis. | Drivas, Theodore G; Wojno, Adam P; Tucker, Budd A; Stone, Edwin M; Bennett, Jean | Science translational medicine. | 2015 Jun 10; | 291ra97 | 26062849 |
| Combined in vitro transcription and reverse transcription to amplify and label complex synthetic oligonucleotide probe libraries. | Murgha, Yusuf; Beliveau, Brian; Semrau, Kassandra; Schwartz, Donald; Wu, Chao-Ting; Gulari, Erdogan; Rouillard, Jean-Marie | BioTechniques. | 2015 Jun; | 26054766 | |
| Syringe-injectable electronics. | Liu, Jia; Fu, Tian-Ming; Cheng, Zengguang; Hong, Guosong; Zhou, Tao; Jin, Lihua; Duvvuri, Madhavi; Jiang, Zhe; Kruskal, Peter; Xie, Chong; Suo, Zhigang; Fang, Ying; Lieber, Charles M | Nature nanotechnology. | 2015 Jul; | 629-36 | 26053995 |
| Photoacoustic tomography imaging and estimation of oxygen saturation of hemoglobin in ocular tissue of rabbits. | Hennen, Stella N; Xing, Wenxin; Shui, Ying-Bo; Zhou, Yong; Kalishman, Jennifer; Andrews-Kaminsky, Lisa B; Kass, Michael A; Beebe, David C; Maslov, Konstantin I; Wang, Lihong V | Experimental eye research. | 2015 Sep; | 26048477 | |
| Scalable microfluidics for single-cell RNA printing and sequencing. | Bose, Sayantan; Wan, Zhenmao; Carr, Ambrose; Rizvi, Abbas H; Vieira, Gregory; Pe'er, Dana; Sims, Peter A | Genome biology. | 2015; | 120 | 26047807 |
| Nonlinear photoacoustic spectroscopy of hemoglobin. | Danielli, Amos; Maslov, Konstantin; Favazza, Christopher P; Xia, Jun; Wang, Lihong V | Applied physics letters. | 2015 May 18; | 26045627 | |
| CRISPR/Cas9 cleavage of viral DNA efficiently suppresses hepatitis B virus. | Ramanan, Vyas; Shlomai, Amir; Cox, David B T; Schwartz, Robert E; Michailidis, Eleftherios; Bhatta, Ankit; Scott, David A; Zhang, Feng; Rice, Charles M; Bhatia, Sangeeta N | Scientific reports. | 2015; | 10833 | 26035283 |
| Robust control of burst suppression for medical coma. | Westover, M Brandon; Kim, Seong-Eun; Ching, ShiNung; Purdon, Patrick L; Brown, Emery N | Journal of neural engineering. | 2015 Aug; | 46004 | 26020243 |
| Epigenetic genome mining of an endophytic fungus leads to the pleiotropic biosynthesis of natural products. | Mao, Xu-Ming; Xu, Wei; Li, Dehai; Yin, Wen-Bing; Chooi, Yit-Heng; Li, Yong-Quan; Tang, Yi; Hu, Youcai | Angewandte Chemie (International ed. in English). | 2015 Jun 22; | 7592-6 | 26013262 |
| Dexterous robotic manipulation of alert adult Drosophila for high-content experimentation. | Savall, Joan; Ho, Eric Tatt Wei; Huang, Cheng; Maxey, Jessica R; Schnitzer, Mark J | Nature methods. | 2015 Jul; | 657-60 | 26005812 |
| Probabilistic Common Spatial Patterns for Multichannel EEG Analysis. | Wu, Wei; Chen, Zhe; Gao, Xiaorong; Li, Yuanqing; Brown, Emery N; Gao, Shangkai | IEEE transactions on pattern analysis and machine intelligence. | 2015 Mar 1; | 639-653 | 26005228 |
| Computational modeling of cardiac optogenetics: Methodology overview & review of findings from simulations. | Boyle, Patrick M; Karathanos, Thomas V; Entcheva, Emilia; Trayanova, Natalia A | Computers in biology and medicine. | 2015 Oct 1; | 200-8 | 26002074 |
| Evolution. Systematic humanization of yeast genes reveals conserved functions and genetic modularity. | Kachroo, Aashiq H; Laurent, Jon M; Yellman, Christopher M; Meyer, Austin G; Wilke, Claus O; Marcotte, Edward M | Science (New York, N.Y.). | 2015 May 22; | 921-5 | 25999509 |
| Does Autism Diagnosis Age or Symptom Severity Differ Among Children According to Whether Assisted Reproductive Technology was Used to Achieve Pregnancy? | Schieve, Laura A; Fountain, Christine; Boulet, Sheree L; Yeargin-Allsopp, Marshalyn; Kissin, Dmitry M; Jamieson, Denise J; Rice, Catherine; Bearman, Peter | Journal of autism and developmental disorders. | 2015 Sep; | 2991-3003 | 25997596 |
| Measuring the signal-to-noise ratio of a neuron. | Czanner, Gabriela; Sarma, Sridevi V; Ba, Demba; Eden, Uri T; Wu, Wei; Eskandar, Emad; Lim, Hubert H; Temereanca, Simona; Suzuki, Wendy A; Brown, Emery N | Proceedings of the National Academy of Sciences of the United States of America. | 2015 Jun 9; | 7141-6 | 25995363 |
| Fetal Mammalian Heart Generates a Robust Compensatory Response to Cell Loss. | Sturzu, Anthony C; Rajarajan, Kuppusamy; Passer, Derek; Plonowska, Karolina; Riley, Alyssa; Tan, Timothy C; Sharma, Arun; Xu, Adele F; Engels, Marc C; Feistritzer, Rebecca; Li, Guang; Selig, Martin K; Geissler, Richard; Robertson, Keston D; Scherrer-Crosb | Circulation. | 2015 Jul 14; | 109-21 | 25995316 |
| Ultrasonic-heating-encoded photoacoustic tomography with virtually augmented detection view. | Wang, Lidai; Li, Guo; Xia, Jun; Wang, Lihong V | Optica. | 2015; | 307-312 | 25984555 |
| Regenerative Engineering and Bionic Limbs. | James, Roshan; Laurencin, Cato T | Rare metals. | 2015 Mar 1; | 143-155 | 25983525 |
| Does language do more than communicate emotion? | Lindquist, Kristen A; Satpute, Ajay B; Gendron, Maria | Current directions in psychological science. | 2015 Apr 1; | 99-108 | 25983400 |
| Engineering strategies for the fermentative production of plant alkaloids in yeast. | Trenchard, Isis J; Smolke, Christina D | Metabolic engineering. | 2015 Jul; | 96-104 | 25981946 |
| Photoacoustic microscopy: superdepth, superresolution, and superb contrast. | Yao, Junjie; Song, Liang; Wang, Lihing V | IEEE pulse. | 2015 May-Jun; | 34-7 | 25974913 |
| Detection of minimal residual disease in B lymphoblastic leukemia using viSNE. | DiGiuseppe, Joseph A; Tadmor, Michelle D; Pe'er, Dana | Cytometry. Part B, Clinical cytometry. | 2015 Sep-Oct; | 294-304 | 25974871 |
| Single molecules meet genomics: pinpointing precision medicine. | Xie, Xiaoliang Sunney | JAMA. | 2015 May 26; | 2021-2 | 25974149 |
| Social communication of predator-induced changes in Drosophila behavior and germ line physiology. | Kacsoh, Balint Z; Bozler, Julianna; Ramaswami, Mani; Bosco, Giovanni | eLife. | 2015 May 13; | 25970035 | |
| Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes. | Beliveau, Brian J; Boettiger, Alistair N; Avendaño, Maier S; Jungmann, Ralf; McCole, Ruth B; Joyce, Eric F; Kim-Kiselak, Caroline; Bantignies, Frédéric; Fonseka, Chamith Y; Erceg, Jelena; Hannan, Mohammed A; Hoang, Hien G; Colognori, David; Lee, Jeannie T; Shih, William M; Yin, Peng; Zhuang, Xiaowei; Wu, Chao-ting | Nature communications. | 2015; | 7147 | 25962338 |
| A convergent and essential interneuron pathway for Mauthner-cell-mediated escapes. | Lacoste, Alix M B; Schoppik, David; Robson, Drew N; Haesemeyer, Martin; Portugues, Ruben; Li, Jennifer M; Randlett, Owen; Wee, Caroline L; Engert, Florian; Schier, Alexander F | Current biology : CB. | 2015 Jun 01; | 25959971 | |
| Cells change their sensitivity to an EGF morphogen gradient to control EGF-induced gene expression. | van Zon, Jeroen Sebastiaan; Kienle, Simone; Huelsz-Prince, Guizela; Barkoulas, Michalis; van Oudenaarden, Alexander | Nature communications. | 2015; | 7053 | 25958991 |
| Modeling the aging heart: from local respiratory defects to global rhythm disturbances. | Khrapko, Konstantin; Trayanova, Natalia; Nattel, Stanley | Cell metabolism. | 2015 May 5; | 25955202 | |
| Multiplex single cell profiling of chromatin accessibility by combinatorial cellular indexing. | Cusanovich, Darren A; Daza, Riza; Adey, Andrew; Pliner, Hannah A; Christiansen, Lena; Gunderson, Kevin L; Steemers, Frank J; Trapnell, Cole; Shendure, Jay | Science (New York, N.Y.). | 2015 May 22; | 25953818 | |
| Brains, genes, and primates. | Izpisua Belmonte, Juan Carlos; Callaway, Edward M; Caddick, Sarah J; Churchland, Patricia; Feng, Guoping; Homanics, Gregg E; Lee, Kuo-Fen; Leopold, David A; Miller, Cory T; Mitchell, Jude F; Mitalipov, Shoukhrat; Moutri, Alysson R; Movshon, J Anthony; Okano, Hideyuki; Reynolds, John H; Ringach, Dario; Sejnowski, Terrence J; Silva, Afonso C; Strick, Peter L; Wu, Jun; Zhang, Feng | Neuron. | 2015 May 6; | 617-31 | 25950631 |
| Direct in vivo assessment of human stem cell graft-host neural circuits. | Byers, Blake; Lee, Hyun Joo; Liu, Jia; Weitz, Andrew J; Lin, Peter; Zhang, Pengbo; Shcheglovitov, Aleksandr; Dolmetsch, Ricardo; Pera, Renee Reijo; Lee, Jin Hyung | NeuroImage. | 2015 Jul 1; | 328-37 | 25936696 |
| Quantifying Pituitary-Adrenal Dynamics and Deconvolution of Concurrent Cortisol and Adrenocorticotropic Hormone Data by Compressed Sensing. | Faghih, Rose; Dahleh, Munther; Adler, Gail; Klerman, Elizabeth; Brown, Emery | IEEE transactions on bio-medical engineering. | 2015 Apr 29; | 25935025 | |
| Multiscale Functional and Molecular Photoacoustic Tomography. | Yao, Junjie; Xia, Jun; Wang, Lihong V | Ultrasonic imaging. | 2015 May 1; | 25933617 | |
| Photoacoustically guided wavefront shaping for enhanced optical focusing in scattering media. | Lai, Puxiang; Wang, Lidai; Tay, Jian Wei; Wang, Lihong V | Nature photonics. | 2015 Feb; | 126-132 | 25914725 |
| Gene length matters in neurons. | Zylka, Mark J; Simon, Jeremy M; Philpot, Benjamin D | Neuron. | 2015 Apr 22; | 353-5 | 25905808 |
| Temporal dynamics in fMRI resting-state activity. | Yuste, Rafael; Fairhall, Adrienne L | Proceedings of the National Academy of Sciences of the United States of America. | 2015 Apr 28; | 25902550 | |
| Noninvasive imaging of immune responses. | Rashidian, Mohammad; Keliher, Edmund J; Bilate, Angelina M; Duarte, Joao N; Wojtkiewicz, Gregory R; Jacobsen, Johanne Tracey; Cragnolini, Juanjo; Swee, Lee Kim; Victora, Gabriel D; Weissleder, Ralph; Ploegh, Hidde L | Proceedings of the National Academy of Sciences of the United States of America. | 2015 May 12; | 6146-51 | 25902531 |
| Ca(2+) signaling in astrocytes from Ip3r2(-/-) mice in brain slices and during startle responses in vivo. | Srinivasan, Rahul; Huang, Ben S; Venugopal, Sharmila; Johnston, April D; Chai, Hua; Zeng, Hongkui; Golshani, Peyman; Khakh, Baljit S | Nature neuroscience. | 2015 May; | 708-17 | 25894291 |
| Drosophila dicer-2 cleavage is mediated by helicase- and dsRNA termini-dependent states that are modulated by Loquacious-PD. | Sinha, Niladri K; Trettin, Kyle D; Aruscavage, P Joseph; Bass, Brenda L | Molecular cell. | 2015 May 7; | 406-17 | 25891075 |
| What Is Next for Retinal Gene Therapy? | Vandenberghe, Luk H | Cold Spring Harbor perspectives in medicine. | 2015 Apr 15; | 25877395 | |
| Three-dimensional photoacoustic endoscopic imaging of the rabbit esophagus. | Yang, Joon Mo; Favazza, Christopher; Yao, Junjie; Chen, Ruimin; Zhou, Qifa; Shung, K Kirk; Wang, Lihong V | PloS one. | 2015; | e0120269 | 25874640 |
| Powerful anti-tumor and anti-angiogenic activity of a new anti-vascular endothelial growth factor receptor 1 peptide in colorectal cancer models. | Cicatiello, Valeria; Apicella, Ivana; Tudisco, Laura; Tarallo, Valeria; Formisano, Luigi; Sandomenico, Annamaria; Kim, Younghee; Bastos-Carvalho, Ana; Orlandi, Augusto; Ambati, Jayakrishna; Ruvo, Menotti; Bianco, Roberto; De Falco, Sandro | Oncotarget. | 2015 Apr 30; | 10563-76 | 25868854 |
| Derivation of highly purified cardiomyocytes from human induced pluripotent stem cells using small molecule-modulated differentiation and subsequent glucose starvation. | Sharma, Arun; Li, Guang; Rajarajan, Kuppusamy; Hamaguchi, Ryoko; Burridge, Paul W; Wu, Sean M | Journal of visualized experiments : JoVE. | 2015 Mar 18; | 25867738 | |
| Direct protein delivery to mammalian cells using cell-permeable Cys2-His2 zinc-finger domains. | Gaj, Thomas; Liu, Jia | Journal of visualized experiments : JoVE. | 2015; | 25866937 | |
| Tandem prenyltransferases catalyze isoprenoid elongation and complexity generation in biosynthesis of quinolone alkaloids. | Zou, Yi; Zhan, Zhajun; Li, Dehai; Tang, Mancheng; Cacho, Ralph A; Watanabe, Kenji; Tang, Yi | Journal of the American Chemical Society. | 2015 Apr 22; | 4980-3 | 25859931 |
| Optical control of biological processes by light-switchable proteins. | Fan, Linlin Z; Lin, Michael Z | Wiley interdisciplinary reviews. Developmental biology. | 2015 Sep-Oct; | 545-54 | 25858669 |
| Closed-loop, ultraprecise, automated craniotomies. | Pak, Nikita; Siegle, Joshua H; Kinney, Justin P; Denman, Daniel J; Blanche, Timothy J; Boyden, Edward S | Journal of neurophysiology. | 2015 Jun 1; | 3943-53 | 25855700 |
| High-throughput functional genomics using CRISPR-Cas9. | Shalem, Ophir; Sanjana, Neville E; Zhang, Feng | Nature reviews. Genetics. | 2015 May; | 299-311 | 25854182 |
| A Bayesian model of category-specific emotional brain responses. | Wager, Tor D; Kang, Jian; Johnson, Timothy D; Nichols, Thomas E; Satpute, Ajay B; Barrett, Lisa Feldman | PLoS computational biology. | 2015 Apr; | e1004066 | 25853490 |
| Potential role for snoRNAs in PKR activation during metabolic stress. | Youssef, Osama A; Safran, Sarah A; Nakamura, Takahisa; Nix, David A; Hotamisligil, Gokhan S; Bass, Brenda L | Proceedings of the National Academy of Sciences of the United States of America. | 2015 Apr 21; | 5023-8 | 25848059 |
| Discovery of tricyclic indoles that potently inhibit Mcl-1 using fragment-based methods and structure-based design. | Burke, Jason P; Bian, Zhiguo; Shaw, Subrata; Zhao, Bin; Goodwin, Craig M; Belmar, Johannes; Browning, Carrie F; Vigil, Dominico; Friberg, Anders; Camper, DeMarco V; Rossanese, Olivia W; Lee, Taekyu; Olejniczak, Edward T; Fesik, Stephen W | Journal of medicinal chemistry. | 2015 May 14; | 3794-805 | 25844895 |
| Neuronal Activity and CaMKII Regulate Kinesin-Mediated Transport of Synaptic AMPARs. | Hoerndli, Frédéric J; Wang, Rui; Mellem, Jerry E; Kallarackal, Angy; Brockie, Penelope J; Thacker, Colin; Madsen, David M; Maricq, Andres V | Neuron. | 2015 Apr 22; | 457-74 | 25843407 |
| In vivo genome editing using Staphylococcus aureus Cas9. | Ran, F Ann; Cong, Le; Yan, Winston X; Scott, David A; Gootenberg, Jonathan S; Kriz, Andrea J; Zetsche, Bernd; Shalem, Ophir; Wu, Xuebing; Makarova, Kira S; Koonin, Eugene V; Sharp, Phillip A; Zhang, Feng | Nature. | 2015 Apr 9; | 186-91 | 25830891 |
| Copy-number variation and false positive prenatal aneuploidy screening results. | Snyder, Matthew W; Simmons, LaVone E; Kitzman, Jacob O; Coe, Bradley P; Henson, Jessica M; Daza, Riza M; Eichler, Evan E; Shendure, Jay; Gammill, Hilary S | The New England journal of medicine. | 2015 Apr 23; | 1639-45 | 25830323 |
| Improved estimation and interpretation of correlations in neural circuits. | Yatsenko, Dimitri; Josi?, Kre?imir; Ecker, Alexander S; Froudarakis, Emmanouil; Cotton, R James; Tolias, Andreas S | PLoS computational biology. | 2015 Mar; | e1004083 | 25826696 |
| Massively Parallel Functional Analysis of BRCA1 RING Domain Variants. | Starita, Lea M; Young, David L; Islam, Muhtadi; Kitzman, Jacob O; Gullingsrud, Justin; Hause, Ronald J; Fowler, Douglas M; Parvin, Jeffrey D; Shendure, Jay; Fields, Stanley | Genetics. | 2015 Jun; | 413-22 | 25823446 |
| Inertial imaging with nanomechanical systems. | Hanay, M Selim; Kelber, Scott I; O'Connell, Cathal D; Mulvaney, Paul; Sader, John E; Roukes, Michael L | Nature nanotechnology. | 2015 Apr; | 25822931 | |
| High-speed label-free functional photoacoustic microscopy of mouse brain in action. | Yao, Junjie; Wang, Lidai; Yang, Joon-Mo; Maslov, Konstantin I; Wong, Terence T W; Li, Lei; Huang, Chih-Hsien; Zou, Jun; Wang, Lihong V | Nature methods. | 2015 May; | 407-10 | 25822799 |
| Single cell transcriptome amplification with MALBAC. | Chapman, Alec R; He, Zi; Lu, Sijia; Yong, Jun; Tan, Longzhi; Tang, Fuchou; Xie, X Sunney | PloS one. | 2015; | e0120889 | 25822772 |
| Targeted disruption of DNMT1, DNMT3A and DNMT3B in human embryonic stem cells. | Liao, Jing; Karnik, Rahul; Gu, Hongcang; Ziller, Michael J; Clement, Kendell; Tsankov, Alexander M; Akopian, Veronika; Gifford, Casey A; Donaghey, Julie; Galonska, Christina; Pop, Ramona; Reyon, Deepak; Tsai, Shengdar Q; Mallard, William; Joung, J Keith; Rinn, John L; Gnirke, Andreas; Meissner, Alexander | Nature genetics. | 2015 May; | 469-78 | 25822089 |
| Interaction with WDR5 promotes target gene recognition and tumorigenesis by MYC. | Thomas, Lance R; Wang, Qingguo; Grieb, Brian C; Phan, Jason; Foshage, Audra M; Sun, Qi; Olejniczak, Edward T; Clark, Travis; Dey, Soumyadeep; Lorey, Shelly; Alicie, Bethany; Howard, Gregory C; Cawthon, Bryan; Ess, Kevin C; Eischen, Christine M; Zhao, Zhongming; Fesik, Stephen W; Tansey, William P | Molecular cell. | 2015 May 7; | 440-52 | 25818646 |
| Multiple facets for extracellular matrix mimicking in regenerative medicine. | Zhang, Yu Shrike; Xia, Younan | Nanomedicine (London, England). | 2015; | 689-92 | 25816873 |
| I'm eating for two: parental dietary effects on offspring metabolism. | Rando, Oliver J; Simmons, Rebecca A | Cell. | 2015 Mar 26; | 93-105 | 25815988 |
| Genome-wide profiling of the C. elegans dsRNAome. | Whipple, Joseph M; Youssef, Osama A; Aruscavage, P Joseph; Nix, David A; Hong, Changjin; Johnson, W Evan; Bass, Brenda L | RNA (New York, N.Y.). | 2015 May; | 786-800 | 25805852 |
| Reassessment of Piwi binding to the genome and Piwi impact on RNA polymerase II distribution. | Lin, Haifan; Chen, Mengjie; Kundaje, Anshul; Valouev, Anton; Yin, Hang; Liu, Na; Neuenkirchen, Nils; Zhong, Mei; Snyder, Michael | Developmental cell. | 2015 Mar 23; | 772-4 | 25805139 |
| Exploiting metabolic and antioxidant pathways to maintain vision in blinding disease. | Ramachandran, Pavitra S; Song, Ji Yun; Bennett, Jean | The Journal of clinical investigation. | 2015 Apr; | 25798615 | |
| Optical-resolution photoacoustic endomicroscopy in vivo. | Yang, Joon-Mo; Li, Chiye; Chen, Ruimin; Rao, Bin; Yao, Junjie; Yeh, Cheng-Hung; Danielli, Amos; Maslov, Konstantin; Zhou, Qifa; Shung, K Kirk; Wang, Lihong V | Biomedical optics express. | 2015 Mar 1; | 918-32 | 25798315 |
| Modes of interaction between individuals dominate the topologies of real world networks. | Lee, Insuk; Kim, Eiru; Marcotte, Edward M | PloS one. | 2015; | 25793969 | |
| Whole-field visual motion drives swimming in larval zebrafish via a stochastic process. | Portugues, Ruben; Haesemeyer, Martin; Blum, Mirella L; Engert, Florian | The Journal of experimental biology. | 2015 May; | 25792753 | |
| N-Sulfonyl-?-lactam hapten as an effective labeling reagent for aldolase mAb. | Inokuma, Tsubasa; Fuller, Roberta P; Barbas 3rd, Carlos F | Bioorganic & medicinal chemistry letters. | 2015 Apr 15; | 1684-7 | 25791455 |
| Association between assisted reproductive technology conception and autism in California, 1997-2007. | Fountain, Christine; Zhang, Yujia; Kissin, Dmitry M; Schieve, Laura A; Jamieson, Denise J; Rice, Catherine; Bearman, Peter | American journal of public health. | 2015 May; | 963-71 | 25790396 |
| Principles of designing interpretable optogenetic behavior experiments. | Allen, Brian D; Singer, Annabelle C; Boyden, Edward S | Learning & memory (Cold Spring Harbor, N.Y.). | 2015 Apr; | 232-8 | 25787711 |
| Neuronal and vascular interactions. | Andreone, Benjamin J; Lacoste, Baptiste; Gu, Chenghua | Annual review of neuroscience. | 2015 Jul 08; | 25782970 | |
| Optochemical dissection of T-box gene-dependent medial floor plate development. | Payumo, Alexander Y; Walker, Whitney J; McQuade, Lindsey E; Yamazoe, Sayumi; Chen, James K | ACS chemical biology. | 2015 Jun 19; | 1466-75 | 25781211 |
| My adventure in tRNA biology, so far. | Pan, Tao | RNA (New York, N.Y.). | 2015 Apr; | 25780201 | |
| Antibody engineering for increased potency, breadth and half-life. | Sievers, Stuart A; Scharf, Louise; West Jr, Anthony P; Bjorkman, Pamela J | Current opinion in HIV and AIDS. | 2015 May; | 151-9 | 25760931 |
| Noninvasive photoacoustic microscopy of methemoglobin in vivo. | Tang, Min; Zhou, Yong; Zhang, Ruiying; Wang, Lihong V | Journal of biomedical optics. | 2015 Mar; | 36007 | 25760655 |
| Prolonged Period of Cortical Plasticity upon Redox Dysregulation in Fast-Spiking Interneurons. | Morishita, Hirofumi; Cabungcal, Jan-Harry; Chen, Ying; Do, Kim Q; Hensch, Takao K | Biological psychiatry. | 2015 Sep 15; | 396-402 | 25758057 |
| Improved cell-penetrating zinc-finger nuclease proteins for precision genome engineering. | Liu, Jia; Gaj, Thomas; Wallen, Mark C; Barbas 3rd, Carlos F | Molecular therapy. Nucleic acids. | 2015 Mar 10; | 25756962 | |
| Visuomotor transformations underlying hunting behavior in zebrafish. | Bianco, Isaac H; Engert, Florian | Current biology : CB. | 2015 Mar 30; | 25754638 | |
| Analog time-reversed ultrasonically encoded light focusing inside scattering media with a 33,000× optical power gain. | Ma, Cheng; Xu, Xiao; Wang, Lihong V | Scientific reports. | 2015 Mar 10; | 25753905 | |
| Genome-wide CRISPR screen in a mouse model of tumor growth and metastasis. | Chen, Sidi; Sanjana, Neville E; Zheng, Kaijie; Shalem, Ophir; Lee, Kyungheon; Shi, Xi; Scott, David A; Song, Jun; Pan, Jen Q; Weissleder, Ralph; Lee, Hakho; Zhang, Feng; Sharp, Phillip A | Cell. | 2015 Mar 12; | 1246-60 | 25748654 |
| Hypothalamic Agrp neurons drive stereotypic behaviors beyond feeding. | Dietrich, Marcelo O; Zimmer, Marcelo R; Bober, Jeremy; Horvath, Tamas L | Cell. | 2015 Mar 12; | 1222-32 | 25748653 |
| Structural biology. Structural basis for chemokine recognition and activation of a viral G protein-coupled receptor. | Burg, John S; Ingram, Jessica R; Venkatakrishnan, A J; Jude, Kevin M; Dukkipati, Abhiram; Feinberg, Evan N; Angelini, Alessandro; Waghray, Deepa; Dror, Ron O; Ploegh, Hidde L; Garcia, K Christopher | Science (New York, N.Y.). | 2015 Mar 6; | 1113-7 | 25745166 |
| High relaxivity Gd(III)-DNA gold nanostars: investigation of shape effects on proton relaxation. | Rotz, Matthew W; Culver, Kayla S B; Parigi, Giacomo; MacRenaris, Keith W; Luchinat, Claudio; Odom, Teri W; Meade, Thomas J | ACS nano. | 2015 Mar 24; | 3385-96 | 25723190 |
| An evolutionary role for HIV latency in enhancing viral transmission. | Rouzine, Igor M; Weinberger, Ariel D; Weinberger, Leor S | Cell. | 2015 Feb 26; | 1002-12 | 25723173 |
| A theoretical justification for single molecule peptide sequencing. | Swaminathan, Jagannath; Boulgakov, Alexander A; Marcotte, Edward M | PLoS computational biology. | 2015 Feb; | e1004080 | 25714988 |
| The DEAH-box helicase Dhr1 dissociates U3 from the pre-rRNA to promote formation of the central pseudoknot. | Sardana, Richa; Liu, Xin; Granneman, Sander; Zhu, Jieyi; Gill, Michael; Papoulas, Ophelia; Marcotte, Edward M; Tollervey, David; Correll, Carl C; Johnson, Arlen W | PLoS biology. | 2015 Feb; | e1002083 | 25710520 |
| Hypothalamic POMC neurons promote cannabinoid-induced feeding. | Koch, Marco; Varela, Luis; Kim, Jae Geun; Kim, Jung Dae; Hernández-Nuño, Francisco; Simonds, Stephanie E; Castorena, Carlos M; Vianna, Claudia R; Elmquist, Joel K; Morozov, Yury M; Rakic, Pasko; Bechmann, Ingo; Cowley, Michael A; Szigeti-Buck, Klara; Dietrich, Marcelo O; Gao, Xiao-Bing; Diano, Sabrina; Horvath, Tamas L | Nature. | 2015 Mar 5; | 45-50 | 25707796 |
| Threat perception after the Boston Marathon bombings: The effects of personal relevance and conceptual framing. | Wormwood, Jolie Baumann; Lynn, Spencer K; Feldman Barrett, Lisa; Quigley, Karen S | Cognition & emotion. | 2016 Apr; | 539-49 | 25707419 |
| Robust and fragile aspects of cortical blood flow in relation to the underlying angioarchitecture. | Shih, Andy Y; Rühlmann, Charlotta; Blinder, Pablo; Devor, Anna; Drew, Patrick J; Friedman, Beth; Knutsen, Per M; Lyden, Patrick D; Matéo, Céline; Mellander, Lisa; Nishimura, Nozomi; Schaffer, Chris B; Tsai, Philbert S; Kleinfeld, David | Microcirculation (New York, N.Y. : 1994). | 2015 Apr; | 204-18 | 25705966 |
| Corrigendum to ''effects of fibrosis morphology on reentrant ventricular tachycardia inducibility and simulation fidelity in patient-derived models''. | Ringenberg, Jordan; Deo, Makarand; Filgueiras-Rama, David; Pizarro, Gonzalo; Ibañez, Borja; Peinado, Rafael; Trayanova, Natalia; Miller, Michael; Merino, José L; Berenfeld, Omer; Devabhaktuni, Vijay | Clinical Medicine Insights. Cardiology. | 2014; | 51 | 25698881 |
| Tripling the detection view of high-frequency linear-array-based photoacoustic computed tomography by using two planar acoustic reflectors. | Li, Guo; Xia, Jun; Wang, Kun; Maslov, Konstantin; Anastasio, Mark A; Wang, Lihong V | Quantitative imaging in medicine and surgery. | 2015 Feb; | 57-62 | 25694954 |
| Multiscale modelling of relationships between protein classes and drug behavior across all diseases using the CANDO platform. | Sethi, Geetika; Chopra, Gaurav; Samudrala, Ram | Mini reviews in medicinal chemistry. | 2015; | 705-17 | 25694071 |
| Virtual electrophysiological study of atrial fibrillation in fibrotic remodeling. | McDowell, Kathleen S; Zahid, Sohail; Vadakkumpadan, Fijoy; Blauer, Joshua; MacLeod, Rob S; Trayanova, Natalia A | PloS one. | 2015; | e0117110 | 25692857 |
| A platform for rapid exploration of aging and diseases in a naturally short-lived vertebrate. | Harel, Itamar; Benayoun, Bérénice A; Machado, Ben; Singh, Param Priya; Hu, Chi-Kuo; Pech, Matthew F; Valenzano, Dario Riccardo; Zhang, Elisa; Sharp, Sabrina C; Artandi, Steven E; Brunet, Anne | Cell. | 2015 Feb 26; | 1013-26 | 25684364 |
| Intrinsic connectivity in the human brain does not reveal networks for 'basic' emotions. | Touroutoglou, Alexandra; Lindquist, Kristen A; Dickerson, Bradford C; Barrett, Lisa Feldman | Social cognitive and affective neuroscience. | 2015 Feb 12; | 25680990 | |
| Nonlytic spread of naked viruses. | Bird, Sara W; Kirkegaard, Karla | Autophagy. | 2015; | 430-1 | 25680079 |
| HypE-specific nanobodies as tools to modulate HypE-mediated target AMPylation. | Truttmann, Matthias C; Wu, Qin; Stiegeler, Sarah; Duarte, Joao N; Ingram, Jessica; Ploegh, Hidde L | The Journal of biological chemistry. | 2015 Apr 3; | 9087-100 | 25678711 |
| Gene expression defines natural changes in mammalian lifespan. | Fushan, Alexey A; Turanov, Anton A; Lee, Sang-Goo; Kim, Eun Bae; Lobanov, Alexei V; Yim, Sun Hee; Buffenstein, Rochelle; Lee, Sang-Rae; Chang, Kyu-Tae; Rhee, Hwanseok; Kim, Jong-So; Yang, Kap-Seok; Gladyshev, Vadim N | Aging cell. | 2015 Jun; | 352-65 | 25677554 |
| Handheld photoacoustic probe to detect both melanoma depth and volume at high speed in vivo. | Zhou, Yong; Li, Guo; Zhu, Liren; Li, Chiye; Cornelius, Lynn A; Wang, Lihong V | Journal of biophotonics. | 2015 Feb 9; | 25676898 | |
| Chromatin regulation at the frontier of synthetic biology. | Keung, Albert J; Joung, J Keith; Khalil, Ahmad S; Collins, James J | Nature reviews. Genetics. | 2015 Mar; | 25668787 | |
| General strategy for biodetection in high ionic strength solutions using transistor-based nanoelectronic sensors. | Gao, Ning; Zhou, Wei; Jiang, Xiaocheng; Hong, Guosong; Fu, Tian-Ming; Lieber, Charles M | Nano letters. | 2015 Mar 11; | 2143-8 | 25664395 |
| Unseen Affective Faces Influence Person Perception Judgments in Schizophrenia. | Kring, Ann M; Siegel, Erika H; Barrett, Lisa Feldman | Clinical psychological science : a journal of the Association for Psychological Science. | 2014 Jul; | 25664225 | |
| 16p11.2 Deletion Syndrome Mice Display Sensory and Ultrasonic Vocalization Deficits During Social Interactions. | Yang, Mu; Mahrt, Elena J; Lewis, Freeman; Foley, Gillian; Portmann, Thomas; Dolmetsch, Ricardo E; Portfors, Christine V; Crawley, Jacqueline N | Autism research : official journal of the International Society for Autism Research. | 2015 Feb 7; | 25663600 | |
| Therapeutic genome editing: prospects and challenges. | Cox, David Benjamin Turitz; Platt, Randall Jeffrey; Zhang, Feng | Nature medicine. | 2015 Feb; | 25654603 | |
| Perspectives on best practices for gene therapy programs. | Cheever, Thomas R; Berkley, Dale; Braun, Serge; Brown, Robert H; Byrne, Barry J; Chamberlain, Jeffrey S; Cwik, Valerie; Duan, Dongsheng; Federoff, Howard J; High, Katherine A; Kaspar, Brian K; Klinger, Katherine W; Larkindale, Jane; Lincecum, John; Mavilio, Fulvio; McDonald, Cheryl L; McLaughlin, James; Weiss McLeod, Bonnie; Mendell, Jerry R; Nuckolls, Glen; Stedman, Hansell H; Tagle, Danilo A; Vandenberghe, Luk H; Wang, Hao; Wernett, Pamela J; Wilson, James M; Porter, John D; Gubitz, Amelie K | Human gene therapy. | 2015 Mar; | 127-33 | 25654329 |
| Spatial information in large-scale neural recordings. | Cybulski, Thaddeus R; Glaser, Joshua I; Marblestone, Adam H; Zamft, Bradley M; Boyden, Edward S; Church, George M; Kording, Konrad P | Frontiers in computational neuroscience. | 2014; | 172 | 25653613 |
| The human burst suppression electroencephalogram of deep hypothermia. | Brandon Westover, M; Ching, ShiNung; Kumaraswamy, Vishakhadatta M; Akeju, Oluwaseun; Pierce, Eric; Cash, Sydney S; Kilbride, Ronan; Brown, Emery N; Purdon, Patrick L | Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. | 2015 Oct; | 1901-14 | 25649968 |
| The evolution of drug resistance in clinical isolates of Candida albicans. | Ford, Christopher B; Funt, Jason M; Abbey, Darren; Issi, Luca; Guiducci, Candace; Martinez, Diego A; Delorey, Toni; Li, Bi Yu; White, Theodore C; Cuomo, Christina; Rao, Reeta P; Berman, Judith; Thompson, Dawn A; Regev, Aviv | eLife. | 2015; | e00662 | 25646566 |
| Comparative analysis of genome maintenance genes in naked mole rat, mouse, and human. | MacRae, Sheila L; Zhang, Quanwei; Lemetre, Christophe; Seim, Inge; Calder, Robert B; Hoeijmakers, Jan; Suh, Yousin; Gladyshev, Vadim N; Seluanov, Andrei; Gorbunova, Vera; Vijg, Jan; Zhang, Zhengdong D | Aging cell. | 2015 Apr; | 288-91 | 25645816 |
| Mechanism of automaticity in cardiomyocytes derived from human induced pluripotent stem cells. | Kim, Jong J; Yang, Lei; Lin, Bo; Zhu, Xiaodong; Sun, Bin; Kaplan, Aaron D; Bett, Glenna C L; Rasmusson, Randall L; London, Barry; Salama, Guy | Journal of molecular and cellular cardiology. | 2015 Apr; | 81-93 | 25644533 |
| Computational analysis of the effect of valvular regurgitation on ventricular mechanics using a 3D electromechanics model. | Lim, Ki Moo; Hong, Seung-Bae; Lee, Byong Kwon; Shim, Eun Bo; Trayanova, Natalia | The journal of physiological sciences : JPS. | 2015 Mar; | 25644379 | |
| A split-Cas9 architecture for inducible genome editing and transcription modulation. | Zetsche, Bernd; Volz, Sara E; Zhang, Feng | Nature biotechnology. | 2015 Feb; | 139-42 | 25643054 |
| Next-generation sequencing approach for connecting secondary metabolites to biosynthetic gene clusters in fungi. | Cacho, Ralph A; Tang, Yi; Chooi, Yit-Heng | Frontiers in microbiology. | 2014; | 774 | 25642215 |
| Photoacoustic tomography: principles and advances. | Xia, Jun; Yao, Junjie; Wang, Lihong V | Electromagnetic waves (Cambridge, Mass.). | 2014; | 22-Jan | 25642127 |
| Sparse feature selection identifies H2A.Z as a novel, pattern-specific biomarker for asymmetrically self-renewing distributed stem cells. | Huh, Yang Hoon; Noh, Minsoo; Burden, Frank R; Chen, Jennifer C; Winkler, David A; Sherley, James L | Stem cell research. | 2015 Mar; | 144-54 | 25636161 |
| Large-scale imaging in small brains. | Ahrens, Misha B; Engert, Florian | Current opinion in neurobiology. | 2015 Jun; | 25636154 | |
| Intra-spike crosslinking overcomes antibody evasion by HIV-1. | Galimidi, Rachel P; Klein, Joshua S; Politzer, Maria S; Bai, Shiyu; Seaman, Michael S; Nussenzweig, Michel C; West Jr, Anthony P; Bjorkman, Pamela J | Cell. | 2015 Jan 29; | 433-46 | 25635457 |
| Small RNAs make big impact in cardiac repair. | Krane, Markus; Deutsch, Marcus-André; Doppler, Stefanie; Lange, Rüdiger; Wu, Sean M | Circulation research. | 2015 Jan 30; | 393-5 | 25634967 |
| Identification of cardiovascular lineage descendants at single-cell resolution. | Li, Guang; Plonowska, Karolina; Kuppusamy, Rajarajan; Sturzu, Anthony; Wu, Sean M | Development (Cambridge, England). | 2015 Mar 1; | 846-57 | 25633351 |
| A novel paradigm for nonassociative long-term memory in Drosophila: predator-induced changes in oviposition behavior. | Kacsoh, Balint Z; Bozler, Julianna; Hodge, Sassan; Ramaswami, Mani; Bosco, Giovanni | Genetics. | 2015 Apr; | 25633088 | |
| The Brain Basis of Positive and Negative Affect: Evidence from a Meta-Analysis of the Human Neuroimaging Literature. | Lindquist, Kristen A; Satpute, Ajay B; Wager, Tor D; Weber, Jochen; Barrett, Lisa Feldman | Cerebral cortex (New York, N.Y. : 1991). | 2015 Jan 28; | 25631056 | |
| Data access for the 1,000 Plants (1KP) project. | Matasci, Naim; Hung, Ling-Hong; Yan, Zhixiang; Carpenter, Eric J; Wickett, Norman J; Mirarab, Siavash; Nguyen, Nam; Warnow, Tandy; Ayyampalayam, Saravanaraj; Barker, Michael; Burleigh, J Gordon; Gitzendanner, Matthew A; Wafula, Eric; Der, Joshua P; dePamphilis, Claude W; Roure, Beatrice; Philippe, Herve; Ruhfel, Brad R; Miles, Nicholas W; Graham, Sean W; Mathews, Sarah; Surek, Barbara; Melkonian, Michael; Soltis, Douglas E; Soltis, Pamela S; Rothfels, Carl; Pokorny, Lisa; Shaw, Jonathan A; DeGironimo, Lisa; Stevenson, Dennis W; Villarreal, Juan Carlos; Chen, Tao; Kutchan, Toni M; Rolf, Megan; Baucom, Regina S; Deyholos, Michael K; Samudrala, Ram; Tian, Zhijian; Wu, Xiaolei; Sun, Xiao; Zhang, Yong; Wang, Jun; Leebens-Mack, Jim; Wong, Gane Ka-Shu | GigaScience. | 2014; | 17 | 25625010 |
| Ameliorating treatment-refractory depression with intranasal ketamine: potential NMDA receptor actions in the pain circuitry representing mental anguish. | Opler, Lewis A; Opler, Mark G A; Arnsten, Amy F T | CNS spectrums. | 2016 Feb; | 22-Dec | 25619798 |
| In vivo deep brain imaging of rats using oral-cavity illuminated photoacoustic computed tomography. | Lin, Li; Xia, Jun; Wong, Terence T W; Li, Lei; Wang, Lihong V | Journal of biomedical optics. | 2015 Jan; | 16019 | 25611865 |
| Cultural variation in emotion perception is real: a response to Sauter, Eisner, Ekman, and Scott (2015). | Gendron, Maria; Roberson, Debi; Barrett, Lisa Feldman | Psychological science. | 2015 Mar; | 357-9 | 25608863 |
| Astrocyte calcium signaling: from observations to functions and the challenges therein. | Khakh, Baljit S; McCarthy, Ken D | Cold Spring Harbor perspectives in biology. | 2015 Apr; | a020404 | 25605709 |
| Molecular regulation of cardiomyocyte differentiation. | Paige, Sharon L; Plonowska, Karolina; Xu, Adele; Wu, Sean M | Circulation research. | 2015 Jan 16; | 341-53 | 25593278 |
| Optical imaging. Expansion microscopy. | Chen, Fei; Tillberg, Paul W; Boyden, Edward S | Science (New York, N.Y.). | 2015 Jan 30; | 543-8 | 25592419 |
| The evolution of bacterial mechanosensitive channels. | Booth, Ian R; Miller, Samantha; Muller, Axel; Lehtovirta-Morley, Laura | Cell calcium. | 2015 Mar; | 140-50 | 25591932 |
| Optical drug monitoring: photoacoustic imaging of nanosensors to monitor therapeutic lithium in vivo. | Cash, Kevin J; Li, Chiye; Xia, Jun; Wang, Lihong V; Clark, Heather A | ACS nano. | 2015 Feb 24; | 1692-8 | 25588028 |
| Chloride cotransporter NKCC1 inhibitor bumetanide protects against white matter injury in a rodent model of periventricular leukomalacia. | Jantzie, Lauren L; Hu, Melody Y; Park, Hyun-Kyung; Jackson, Michele C; Yu, Jenny; Maxwell, Jessie R; Jensen, Frances E | Pediatric research. | 2015 Apr; | 554-62 | 25585037 |
| Elucidation of the concise biosynthetic pathway of the communesin indole alkaloids. | Lin, Hsiao-Ching; Chiou, Grace; Chooi, Yit-Heng; McMahon, Travis C; Xu, Wei; Garg, Neil K; Tang, Yi | Angewandte Chemie (International ed. in English). | 2015 Mar 2; | 3004-7 | 25571861 |
| Mouse-human experimental epigenetic analysis unmasks dietary targets and genetic liability for diabetic phenotypes. | Multhaup, Michael L; Seldin, Marcus M; Jaffe, Andrew E; Lei, Xia; Kirchner, Henriette; Mondal, Prosenjit; Li, Yuanyuan; Rodriguez, Varenka; Drong, Alexander; Hussain, Mehboob; Lindgren, Cecilia; McCarthy, Mark; Naslund, Erik; Zierath, Juleen R; Wong, G William; Feinberg, Andrew P | Cell metabolism. | 2015 Jan 6; | 138-49 | 25565211 |
| Tunable loading of oligonucleotides with secondary structure on gold nanoparticles through a pH-driven method. | Dam, Duncan Hieu M; Lee, Hyojin; Lee, Raymond C; Kim, Ki Hun; Kelleher, Neil L; Odom, Teri W | Bioconjugate chemistry. | 2015 Feb 18; | 279-85 | 25564799 |
| Spatial tuning of acoustofluidic pressure nodes by altering net sonic velocity enables high-throughput, efficient cell sorting. | Jung, Seung-Yong; Notton, Timothy; Fong, Erika; Shusteff, Maxim; Weinberger, Leor S | Lab on a chip. | 2015 Feb 21; | 1000-3 | 25563937 |
| Massively parallel single-amino-acid mutagenesis. | Kitzman, Jacob O; Starita, Lea M; Lo, Russell S; Fields, Stanley; Shendure, Jay | Nature methods. | 2015 Mar; | 203-6, 4 p following 206 | 25559584 |
| Multi-view optical resolution photoacoustic microscopy. | Zhu, Liren; Li, Lei; Gao, Liang; Wang, Lihong V | Optica. | 2014; | 217-222 | 25558469 |
| Optical focusing deep inside dynamic scattering media with near-infrared time-reversed ultrasonically encoded (TRUE) light. | Liu, Yan; Lai, Puxiang; Ma, Cheng; Xu, Xiao; Grabar, Alexander A; Wang, Lihong V | Nature communications. | 2015; | 5904 | 25556918 |
| Scaling of gene expression with transcription-factor fugacity. | Weinert, Franz M; Brewster, Robert C; Rydenfelt, Mattias; Phillips, Rob; Kegel, Willem K | Physical review letters. | 2014 Dec 19; | 258101 | 25554908 |
| ýýýý*ýýý-targeted copper nanoparticles incorporating an Sn 2 lipase-labile fumagillin prodrug for photoacoustic neovascular imaging and treatment. | Zhang, Ruiying; Pan, Dipanjan; Cai, Xin; Yang, Xiaoxia; Senpan, Angana; Allen, John S; Lanza, Gregory M; Wang, Lihong V | Theranostics. | 2015; | 124-33 | 25553103 |
| Condensins exert force on chromatin-nuclear envelope tethers to mediate nucleoplasmic reticulum formation in Drosophila melanogaster. | Bozler, Julianna; Nguyen, Huy Q; Rogers, Gregory C; Bosco, Giovanni | G3 (Bethesda, Md.). | 2014 Dec 30; | 25552604 | |
| Sensory determinants of behavioral dynamics in Drosophila thermotaxis. | Klein, Mason; Afonso, Bruno; Vonner, Ashley J; Hernandez-Nunez, Luis; Berck, Matthew; Tabone, Christopher J; Kane, Elizabeth A; Pieribone, Vincent A; Nitabach, Michael N; Cardona, Albert; Zlatic, Marta; Sprecher, Simon G; Gershow, Marc; Garrity, Paul A; Samuel, Aravinthan D T | Proceedings of the National Academy of Sciences of the United States of America. | 2015 Jan 13; | 25550513 | |
| INK4 locus of the tumor-resistant rodent, the naked mole rat, expresses a functional p15/p16 hybrid isoform. | Tian, Xiao; Azpurua, Jorge; Ke, Zhonghe; Augereau, Adeline; Zhang, Zhengdong D; Vijg, Jan; Gladyshev, Vadim N; Gorbunova, Vera; Seluanov, Andrei | Proceedings of the National Academy of Sciences of the United States of America. | 2015 Jan 27; | 1053-8 | 25550505 |
| The influence of promoter architectures and regulatory motifs on gene expression in Escherichia coli. | Rydenfelt, Mattias; Garcia, Hernan G; Cox 3rd, Robert Sidney; Phillips, Rob | PloS one. | 2014; | e114347 | 25549361 |
| Optogenetic activation of cholinergic neurons in the PPT or LDT induces REM sleep. | Van Dort, Christa J; Zachs, Daniel P; Kenny, Jonathan D; Zheng, Shu; Goldblum, Rebecca R; Gelwan, Noah A; Ramos, Daniel M; Nolan, Michael A; Wang, Karen; Weng, Feng-Ju; Lin, Yingxi; Wilson, Matthew A; Brown, Emery N | Proceedings of the National Academy of Sciences of the United States of America. | 2015 Jan 13; | 584-9 | 25548191 |
| Intracellular expression of camelid single-domain antibodies specific for influenza virus nucleoprotein uncovers distinct features of its nuclear localization. | Ashour, Joseph; Schmidt, Florian I; Hanke, Leo; Cragnolini, Juanjo; Cavallari, Marco; Altenburg, Arwen; Brewer, Rebeccah; Ingram, Jessica; Shoemaker, Charles; Ploegh, Hidde L | Journal of virology. | 2015 Mar; | 2792-800 | 25540369 |
| Time-reversed adapted-perturbation (TRAP) optical focusing onto dynamic objects inside scattering media. | Ma, Cheng; Xu, Xiao; Liu, Yan; Wang, Lihong V | Nature photonics. | 2014 Dec; | 931-936 | 25530797 |
| Deficiency of the 15-kDa selenoprotein led to cytoskeleton remodeling and non-apoptotic membrane blebbing through a RhoA/ROCK pathway. | Bang, Jeyoung; Jang, Mihyun; Huh, Jang Hoe; Na, Ji-Woon; Shim, Myoungsup; Carlson, Bradley A; Tobe, Ryuta; Tsuji, Petra A; Gladyshev, Vadim N; Hatfield, Dolph L; Lee, Byeong Jae | Biochemical and biophysical research communications. | 2015 Jan 24; | 884-90 | 25529450 |
| Promoter architecture dictates cell-to-cell variability in gene expression. | Jones, Daniel L; Brewster, Robert C; Phillips, Rob | Science (New York, N.Y.). | 2014 Dec 19; | 1533-6 | 25525251 |
| Association of assisted reproductive technology (ART) treatment and parental infertility diagnosis with autism in ART-conceived children. | Kissin, D M; Zhang, Y; Boulet, S L; Fountain, C; Bearman, P; Schieve, L; Yeargin-Allsopp, M; Jamieson, D J | Human reproduction (Oxford, England). | 2015 Feb; | 454-65 | 25518976 |
| GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases. | Tsai, Shengdar Q; Zheng, Zongli; Nguyen, Nhu T; Liebers, Matthew; Topkar, Ved V; Thapar, Vishal; Wyvekens, Nicolas; Khayter, Cyd; Iafrate, A John; Le, Long P; Aryee, Martin J; Joung, J Keith | Nature biotechnology. | 2015 Feb; | 187-97 | 25513782 |
| A zebrafish model of myelodysplastic syndrome produced through tet2 genomic editing. | Gjini, Evisa; Mansour, Marc R; Sander, Jeffry D; Moritz, Nadine; Nguyen, Ashley T; Kesarsing, Michiel; Gans, Emma; He, Shuning; Chen, Si; Ko, Myunggon; Kuang, You-Yi; Yang, Song; Zhou, Yi; Rodig, Scott; Zon, Leonard I; Joung, J Keith; Rao, Anjana; Look, A Thomas | Molecular and cellular biology. | 2015 Mar; | 25512612 | |
| A self-assembling lanthanide molecular nanoparticle for optical imaging. | Brown, Katherine A; Yang, Xiaoping; Schipper, Desmond; Hall, Justin W; DePue, Lauren J; Gnanam, Annie J; Arambula, Jonathan F; Jones, Jessica N; Swaminathan, Jagannath; Dieye, Yakhya; Vadivelu, Jamuna; Chandler, Don J; Marcotte, Edward M; Sessler, Jonathan L; Ehrlich, Lauren I R; Jones, Richard A | Dalton transactions (Cambridge, England : 2003). | 2015 Feb 14; | 2667-75 | 25512085 |
| Disrupted calcium release as a mechanism for atrial alternans associated with human atrial fibrillation. | Chang, Kelly C; Bayer, Jason D; Trayanova, Natalia A | PLoS computational biology. | 2014 Dec; | e1004011 | 25501557 |
| High-resolution sequencing and modeling identifies distinct dynamic RNA regulatory strategies. | Rabani, Michal; Raychowdhury, Raktima; Jovanovic, Marko; Rooney, Michael; Stumpo, Deborah J; Pauli, Andrea; Hacohen, Nir; Schier, Alexander F; Blackshear, Perry J; Friedman, Nir; Amit, Ido; Regev, Aviv | Cell. | 2014 Dec 18; | 1698-710 | 25497548 |
| Methylation-dependent acyl transfer between polyketide synthase and nonribosomal peptide synthetase modules in fungal natural product biosynthesis. | Zou, Yi; Xu, Wei; Tsunematsu, Yuta; Tang, Mancheng; Watanabe, Kenji; Tang, Yi | Organic letters. | 2014 Dec 19; | 6390-3 | 25494235 |
| Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex. | Konermann, Silvana; Brigham, Mark D; Trevino, Alexandro E; Joung, Julia; Abudayyeh, Omar O; Barcena, Clea; Hsu, Patrick D; Habib, Naomi; Gootenberg, Jonathan S; Nishimasu, Hiroshi; Nureki, Osamu; Zhang, Feng | Nature. | 2015 Jan 29; | 583-8 | 25494202 |
| Imaging intracellular Ca²? signals in striatal astrocytes from adult mice using genetically-encoded calcium indicators. | Jiang, Ruotian; Haustein, Martin D; Sofroniew, Michael V; Khakh, Baljit S | Journal of visualized experiments : JoVE. | 2014; | e51972 | 25490346 |
| Myocardial infarct segmentation and reconstruction from 2D late-gadolinium enhanced magnetic resonance images. | Ukwatta, Eranga; Yuan, Jing; Qiu, Wu; Wu, Katherine C; Trayanova, Natalia; Vadakkumpadan, Fijoy | Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention. | 2014; | 554-61 | 25485423 |
| Patching up broken hearts: cardiac cell therapy gets a bioengineered boost. | Serpooshan, Vahid; Wu, Sean M | Cell stem cell. | 2014 Dec 04; | 25479741 | |
| Stimuli-Responsive Materials for Controlled Release of Theranostic Agents. | Wang, Yucai; Shim, Min Suk; Levinson, Nathanael S; Sung, Hsing-Wen; Xia, Younan | Advanced functional materials. | 2014 Jul 16; | 4206-4220 | 25477774 |
| Decreased H3K27 and H3K4 trimethylation on mortal chromosomes in distributed stem cells. | Huh, Y H; Sherley, J L | Cell death & disease. | 2014; | e1554 | 25476902 |
| IL-18 is not therapeutic for neovascular age-related macular degeneration. | Hirano, Yoshio; Yasuma, Tetsuhiro; Mizutani, Takeshi; Fowler, Benjamin J; Tarallo, Valeria; Yasuma, Reo; Kim, Younghee; Bastos-Carvalho, Ana; Kerur, Nagaraj; Gelfand, Bradley D; Bogdanovich, Sasha; He, Shikun; Zhang, Xiaohui; Nozaki, Miho; Ijima, Ryo; Kaneko, Hiroki; Ogura, Yuichiro; Terasaki, Hiroko; Nagai, Hiroshi; Haro, Isao; Núñez, Gabriel; Ambati, Balamurali K; Hinton, David R; Ambati, Jayakrishna | Nature medicine. | 2014 Dec; | 1372-5 | 25473914 |
| Single-shot compressed ultrafast photography at one hundred billion frames per second. | Gao, Liang; Liang, Jinyang; Li, Chiye; Wang, Lihong V | Nature. | 2014 Dec 4; | 74-7 | 25471883 |
| Deconstructing transcriptional heterogeneity in pluripotent stem cells. | Kumar, Roshan M; Cahan, Patrick; Shalek, Alex K; Satija, Rahul; DaleyKeyser, A Jay; Li, Hu; Zhang, Jin; Pardee, Keith; Gennert, David; Trombetta, John J; Ferrante, Thomas C; Regev, Aviv; Daley, George Q; Collins, James J | Nature. | 2014 Dec 4; | 56-61 | 25471879 |
| Biodistribution and in vivo toxicity of aptamer-loaded gold nanostars. | Dam, Duncan Hieu M; Culver, Kayla S B; Kandela, Irawati; Lee, Raymond C; Chandra, Kavita; Lee, Hyojin; Mantis, Christine; Ugolkov, Andrey; Mazar, Andrew P; Odom, Teri W | Nanomedicine : nanotechnology, biology, and medicine. | 2015 Apr; | 671-9 | 25461281 |
| ''Beauty is a light in the heart'': the transformative potential of optogenetics for clinical applications in cardiovascular medicine. | Boyle, Patrick M; Karathanos, Thomas V; Trayanova, Natalia A | Trends in cardiovascular medicine. | 2015 Feb; | 73-81 | 25453984 |
| The Effects of Stress Exposure on Prefrontal Cortex: Translating Basic Research into Successful Treatments for Post-Traumatic Stress Disorder. | Arnsten, Amy F T; Raskind, Murray A; Taylor, Fletcher B; Connor, Daniel F | Neurobiology of stress. | 2015 Jan 1; | 89-99 | 25436222 |
| Facile characterization of aptamer kinetic and equilibrium binding properties using surface plasmon resonance. | Chang, Andrew L; McKeague, Maureen; Smolke, Christina D | Methods in enzymology. | 2014; | 451-66 | 25432760 |
| Disruption of thalamic functional connectivity is a neural correlate of dexmedetomidine-induced unconsciousness. | Akeju, Oluwaseun; Loggia, Marco L; Catana, Ciprian; Pavone, Kara J; Vazquez, Rafael; Rhee, James; Contreras Ramirez, Violeta; Chonde, Daniel B; Izquierdo-Garcia, David; Arabasz, Grae; Hsu, Shirley; Habeeb, Kathleen; Hooker, Jacob M; Napadow, Vitaly; Brown, Emery N; Purdon, Patrick L | eLife. | 2014; | e04499 | 25432022 |
| Exploring susceptibility to atrial and ventricular arrhythmias resulting from remodeling of the passive electrical properties in the heart: a simulation approach. | Trayanova, Natalia A; Boyle, Patrick M; Arevalo, Hermenegild J; Zahid, Sohail | Frontiers in physiology. | 2014; | 435 | 25429272 |
| Frequency-swept time-reversed ultrasonically encoded optical focusing. | Suzuki, Yuta; Wang, Lihong V | Applied physics letters. | 2014 Nov 10; | 191108 | 25425744 |
| Directed evolution of APEX2 for electron microscopy and proximity labeling. | Lam, Stephanie S; Martell, Jeffrey D; Kamer, Kimberli J; Deerinck, Thomas J; Ellisman, Mark H; Mootha, Vamsi K; Ting, Alice Y | Nature methods. | 2015 Jan; | 51-4 | 25419960 |
| Imaging changes in the cytosolic ATP-to-ADP ratio. | Tantama, Mathew; Yellen, Gary | Methods in enzymology. | 2014; | 355-71 | 25416365 |
| Nucleoside reverse transcriptase inhibitors possess intrinsic anti-inflammatory activity. | Fowler, Benjamin J; Gelfand, Bradley D; Kim, Younghee; Kerur, Nagaraj; Tarallo, Valeria; Hirano, Yoshio; Amarnath, Shoba; Fowler, Daniel H; Radwan, Marta; Young, Mark T; Pittman, Keir; Kubes, Paul; Agarwal, Hitesh K; Parang, Keykavous; Hinton, David R; Bastos-Carvalho, Ana; Li, Shengjian; Yasuma, Tetsuhiro; Mizutani, Takeshi; Yasuma, Reo; Wright, Charles; Ambati, Jayakrishna | Science (New York, N.Y.). | 2014 Nov 21; | 1000-3 | 25414314 |
| Constructing cities, deconstructing scaling laws. | Arcaute, Elsa; Hatna, Erez; Ferguson, Peter; Youn, Hyejin; Johansson, Anders; Batty, Michael | Journal of the Royal Society, Interface / the Royal Society. | 2015 Jan 6; | 20140745 | 25411405 |
| The transcriptome of the bowhead whale Balaena mysticetus reveals adaptations of the longest-lived mammal. | Seim, Inge; Ma, Siming; Zhou, Xuming; Gerashchenko, Maxim V; Lee, Sang-Goo; Suydam, Robert; George, John C; Bickham, John W; Gladyshev, Vadim N | Aging. | 2014 Oct; | 879-99 | 25411232 |
| Photoacoustic lymphatic imaging with high spatial-temporal resolution. | Martel, Catherine; Yao, Junjie; Huang, Chih-Hsien; Zou, Jun; Randolph, Gwendalyn J; Wang, Lihong V | Journal of biomedical optics. | 2014 Nov; | 116009 | 25408958 |
| Topoisomerase 1 inhibition reversibly impairs synaptic function. | Mabb, Angela M; Kullmann, Paul H M; Twomey, Margaret A; Miriyala, Jayalakshmi; Philpot, Benjamin D; Zylka, Mark J | Proceedings of the National Academy of Sciences of the United States of America. | 2014 Dec 2; | 17290-5 | 25404338 |
| Tunable protein degradation in bacteria. | Cameron, D Ewen; Collins, James J | Nature biotechnology. | 2014 Dec; | 1276-81 | 25402616 |
| Photoacoustic Brain Imaging: from Microscopic to Macroscopic Scales. | Yao, Junjie; Wang, Lihong V | Neurophotonics. | 2014 May 28; | 25401121 | |
| Genome engineering with custom recombinases. | Gaj, Thomas; Barbas 3rd, Carlos F | Methods in enzymology. | 2014; | 79-91 | 25398336 |
| A Drosophila toolkit for the visualization and quantification of viral replication launched from transgenic genomes. | Wernet, Mathias F; Klovstad, Martha; Clandinin, Thomas R | PloS one. | 2014; | e112092 | 25386852 |
| Breakthrough in Photonics 2013: Photoacoustic Tomography in Biomedicine. | Yao, Junjie; Wang, Lihong V | IEEE photonics journal. | 2014 Apr; | 25383143 | |
| Grueneisen relaxation photoacoustic microscopy. | Wang, Lidai; Zhang, Chi; Wang, Lihong V | Physical review letters. | 2014 Oct 24; | 174301 | 25379919 |
| Pupil fluctuations track fast switching of cortical states during quiet wakefulness. | Reimer, Jacob; Froudarakis, Emmanouil; Cadwell, Cathryn R; Yatsenko, Dimitri; Denfield, George H; Tolias, Andreas S | Neuron. | 2014 Oct 22; | 355-62 | 25374359 |
| Cell intrinsic modulation of Wnt signaling controls neuroblast migration in C. elegans. | Mentink, Remco A; Middelkoop, Teije C; Rella, Lorenzo; Ji, Ni; Tang, Chung Yin; Betist, Marco C; van Oudenaarden, Alexander; Korswagen, Hendrik C | Developmental cell. | 2014 Oct 27; | 188-201 | 25373777 |
| Dominant drug targets suppress the emergence of antiviral resistance. | Tanner, Elizabeth J; Liu, Hong-mei; Oberste, M Steven; Pallansch, Mark; Collett, Marc S; Kirkegaard, Karla | eLife. | 2014; | 25365453 | |
| Optogenetics-enabled dynamic modulation of action potential duration in atrial tissue: feasibility of a novel therapeutic approach. | Karathanos, Thomas V; Boyle, Patrick M; Trayanova, Natalia A | Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology. | 2014 Nov; | iv69-iv76 | 25362173 |
| One-step enzymatic modification of the cell surface redirects cellular cytotoxicity and parasite tropism. | Swee, Lee Kim; Lourido, Sebastian; Bell, George W; Ingram, Jessica R; Ploegh, Hidde L | ACS chemical biology. | 2015 Feb 20; | 460-5 | 25360987 |
| Amplitude-masked photoacoustic wavefront shaping and application in flowmetry. | Tay, Jian Wei; Liang, Jinyang; Wang, Lihong V | Optics letters. | 2014 Oct 1; | 5499-502 | 25360912 |
| DICER1/Alu RNA dysmetabolism induces Caspase-8-mediated cell death in age-related macular degeneration. | Kim, Younghee; Tarallo, Valeria; Kerur, Nagaraj; Yasuma, Tetsuhiro; Gelfand, Bradley D; Bastos-Carvalho, Ana; Hirano, Yoshio; Yasuma, Reo; Mizutani, Takeshi; Fowler, Benjamin J; Li, Shengjian; Kaneko, Hiroki; Bogdanovich, Sasha; Ambati, Balamurali K; Hinton, David R; Hauswirth, William W; Hakem, Razqallah; Wright, Charles; Ambati, Jayakrishna | Proceedings of the National Academy of Sciences of the United States of America. | 2014 Nov 11; | 16082-7 | 25349431 |
| The rate of osmotic downshock determines the survival probability of bacterial mechanosensitive channel mutants. | Bialecka-Fornal, Maja; Lee, Heun Jin; Phillips, Rob | Journal of bacteriology. | 2015 Jan 1; | 231-7 | 25349158 |
| Cell-based reporters reveal in vivo dynamics of dopamine and norepinephrine release in murine cortex. | Muller, Arnaud; Joseph, Victory; Slesinger, Paul A; Kleinfeld, David | Nature methods. | 2014 Dec; | 1245-52 | 25344639 |
| Germs are germs, and why not take a risk? Patients' expectations for prescribing antibiotics in an inner-city emergency department. | Broniatowski, David A; Klein, Eili Y; Reyna, Valerie F | Medical decision making : an international journal of the Society for Medical Decision Making. | 2015 Jan; | 60-7 | 25331913 |
| In vivo interrogation of gene function in the mammalian brain using CRISPR-Cas9. | Swiech, Lukasz; Heidenreich, Matthias; Banerjee, Abhishek; Habib, Naomi; Li, Yinqing; Trombetta, John; Sur, Mriganka; Zhang, Feng | Nature biotechnology. | 2015 Jan; | 102-6 | 25326897 |
| Drugging the undruggable RAS: Mission possible? | Cox, Adrienne D; Fesik, Stephen W; Kimmelman, Alec C; Luo, Ji; Der, Channing J | Nature reviews. Drug discovery. | 2014 Nov; | 828-51 | 25323927 |
| Fragment-based screening of the bromodomain of ATAD2. | Harner, Mary J; Chauder, Brian A; Phan, Jason; Fesik, Stephen W | Journal of medicinal chemistry. | 2014 Nov 26; | 25314628 | |
| Computational design of a red fluorophore ligase for site-specific protein labeling in living cells. | Liu, Daniel S; Nivon, Lucas G; Richter, Florian; Goldman, Peter J; Deerinck, Thomas J; Yao, Jennifer Z; Richardson, Douglas; Phipps, William S; Ye, Anne Z; Ellisman, Mark H; Drennan, Catherine L; Baker, David; Ting, Alice Y | Proceedings of the National Academy of Sciences of the United States of America. | 2014 Oct 28; | E4551-9 | 25313043 |
| Simultaneous mapping of membrane voltage and calcium in zebrafish heart in vivo reveals chamber-specific developmental transitions in ionic currents. | Hou, Jennifer H; Kralj, Joel M; Douglass, Adam D; Engert, Florian; Cohen, Adam E | Frontiers in physiology. | 2014; | 344 | 25309445 |
| Directional interactions and cooperativity between mechanosensitive membrane proteins. | Haselwandter, Christoph A; Phillips, Rob | Europhysics letters. | 2013 Mar; | 68002p1-68002p6 | 25309021 |
| Identification of Orai1 channel inhibitors by using minimal functional domains to screen small molecule microarrays. | Sadaghiani, Amir Masoud; Lee, Sang Min; Odegaard, Justin I; Leveson-Gower, Dennis B; McPherson, Olivia M; Novick, Paul; Kim, Mi Ri; Koehler, Angela N; Negrin, Robert; Dolmetsch, Ricardo E; Park, Chan Young | Chemistry & biology. | 2014 Oct 23; | 1278-92 | 25308275 |
| O-GlcNAc transferase enables AgRP neurons to suppress browning of white fat. | Ruan, Hai-Bin; Dietrich, Marcelo O; Liu, Zhong-Wu; Zimmer, Marcelo R; Li, Min-Dian; Singh, Jay Prakash; Zhang, Kaisi; Yin, Ruonan; Wu, Jing; Horvath, Tamas L; Yang, Xiaoyong | Cell. | 2014 Oct 9; | 306-17 | 25303527 |
| Sensitivity of photoacoustic microscopy. | Yao, Junjie; Wang, Lihong V | Photoacoustics. | 2014 Jun; | 87-101 | 25302158 |
| Design and characterization of structured protein linkers with differing flexibilities. | Klein, Joshua S; Jiang, Siduo; Galimidi, Rachel P; Keeffe, Jennifer R; Bjorkman, Pamela J | Protein engineering, design & selection : PEDS. | 2014 Oct; | 325-30 | 25301959 |
| Biophysical Modeling of Alpha Rhythms During Halothane-Induced Unconsciousness. | Vijayan, Sujith; Ching, ShiNung; Purdon, Patrick L; Brown, Emery N; Kopell, Nancy J | International IEEE/EMBS Conference on Neural Engineering : [proceedings]. International IEEE EMBS Conference on Neural Engineering. | 2013; | 1104-1107 | 25284633 |
| Lanthanide nano-drums: a new class of molecular nanoparticles for potential biomedical applications. | Jones, Richard A; Gnanam, Annie J; Arambula, Jonathan F; Jones, Jessica N; Swaminathan, Jagannath; Yang, Xiaoping; Schipper, Desmond; Hall, Justin W; DePue, Lauren J; Dieye, Yakhya; Vadivelu, Jamuna; Chandler, Don J; Marcotte, Edward M; Sessler, Jonathan L; Ehrlich, Lauren I R; Brown, Katherine A | Faraday discussions. | 2014; | 241-55 | 25284181 |
| Posttranscriptional regulation of gene expression by Piwi proteins and piRNAs. | Watanabe, Toshiaki; Lin, Haifan | Molecular cell. | 2014 Oct 2; | 18-27 | 25280102 |
| Protein-responsive ribozyme switches in eukaryotic cells. | Kennedy, Andrew B; Vowles, James V; d'Espaux, Leo; Smolke, Christina D | Nucleic acids research. | 2014 Oct 29; | 12306-21 | 25274734 |
| Modulation depth estimation and variable selection in state-space models for neural interfaces. | Malik, Wasim Q; Hochberg, Leigh R; Donoghue, John P; Brown, Emery N | IEEE transactions on bio-medical engineering. | 2015 Feb; | 570-81 | 25265627 |
| CRISPR-Cas9 knockin mice for genome editing and cancer modeling. | Platt, Randall J; Chen, Sidi; Zhou, Yang; Yim, Michael J; Swiech, Lukasz; Kempton, Hannah R; Dahlman, James E; Parnas, Oren; Eisenhaure, Thomas M; Jovanovic, Marko; Graham, Daniel B; Jhunjhunwala, Siddharth; Heidenreich, Matthias; Xavier, Ramnik J; Langer, Robert; Anderson, Daniel G; Hacohen, Nir; Regev, Aviv; Feng, Guoping; Sharp, Phillip A; Zhang, Feng | Cell. | 2014 Oct 9; | 440-55 | 25263330 |
| The ins and outs of viral infection: keystone meeting review. | Bird, Sara W; Kirkegaard, Karla; Agbandje-McKenna, Mavis; Freed, Eric O | Viruses. | 2014 Sep; | 3652-62 | 25256395 |
| Effects of sevoflurane and propofol on frontal electroencephalogram power and coherence. | Akeju, Oluwaseun; Westover, M Brandon; Pavone, Kara J; Sampson, Aaron L; Hartnack, Katharine E; Brown, Emery N; Purdon, Patrick L | Anesthesiology. | 2014 Nov; | 990-8 | 25233374 |
| The big data problem: turning maps into knowledge. | Engert, Florian | Neuron. | 2014 Sep 17; | 25233305 | |
| Designing tools for assumption-proof brain mapping. | Marblestone, Adam H; Boyden, Edward S | Neuron. | 2014 Sep 17; | 1239-41 | 25233303 |
| A system for multilocus chromosomal integration and transformation-free selection marker rescue. | Siddiqui, Michael S; Choksi, Atri; Smolke, Christina D | FEMS yeast research. | 2014 Dec; | 1171-85 | 25226817 |
| Microvascular quantification based on contour-scanning photoacoustic microscopy. | Yeh, Chenghung; Soetikno, Brian; Hu, Song; Maslov, Konstantin I; Wang, Lihong V | Journal of biomedical optics. | 2014 Sep; | 96011 | 25223708 |
| Joint cross-correlation analysis reveals complex, time-dependent functional relationship between cortical neurons and arm electromyograms. | Zhuang, Katie Z; Lebedev, Mikhail A; Nicolelis, Miguel A L | Journal of neurophysiology. | 2014 Dec 1; | 2865-87 | 25210153 |
| Ex vivo Expansion of Human Adult Pancreatic Cells with Properties of Distributed Stem Cells by Suppression of Asymmetric Cell Kinetics. | Pare, Jf; Sherley, Jl | Journal of stem cell research & therapy. | 2013 Sep; | 149 | 25197614 |
| The mechanics of PLGA nanofiber scaffolds with biomimetic gradients in mineral for tendon-to-bone repair. | Lipner, J; Liu, W; Liu, Y; Boyle, J; Genin, G M; Xia, Y; Thomopoulos, S | Journal of the mechanical behavior of biomedical materials. | 2014 Dec; | 59-68 | 25194525 |
| A comparison of propofol- and dexmedetomidine-induced electroencephalogram dynamics using spectral and coherence analysis. | Akeju, Oluwaseun; Pavone, Kara J; Westover, M Brandon; Vazquez, Rafael; Prerau, Michael J; Harrell, Priscilla G; Hartnack, Katharine E; Rhee, James; Sampson, Aaron L; Habeeb, Kathleen; Gao, Lei; Lei, Gao; Pierce, Eric T; Walsh, John L; Brown, Emery N; Purdon, Patrick L | Anesthesiology. | 2014 Nov; | 978-89 | 25187999 |
| Organ-targeted high-throughput in vivo biologics screen identifies materials for RNA delivery. | Chang, Tsung-Yao; Shi, Peng; Steinmeyer, Joseph D; Chatnuntawech, Itthi; Tillberg, Paul; Love, Kevin T; Eimon, Peter M; Anderson, Daniel G; Yanik, Mehmet Fatih | Integrative biology : quantitative biosciences from nano to macro. | 2014 Oct; | 926-34 | 25184623 |
| Biosynthesis of fungal indole alkaloids. | Xu, Wei; Gavia, Diego J; Tang, Yi | Natural product reports. | 2014 Oct; | 1474-87 | 25180619 |
| Levels of circulating myeloid subpopulations and of heme oxygenase-1 do not predict CD4(+) T cell recovery after the initiation of antiretroviral therapy for HIV disease. | Seu, Lillian; Ortiz, Gabriel M; Burt, Trevor D; Deeks, Steven G; Martin, Jeffrey N; McCune, Joseph M | AIDS research and therapy. | 2014; | 27 | 25180041 |
| Adaptations to a subterranean environment and longevity revealed by the analysis of mole rat genomes. | Fang, Xiaodong; Seim, Inge; Huang, Zhiyong; Gerashchenko, Maxim V; Xiong, Zhiqiang; Turanov, Anton A; Zhu, Yabing; Lobanov, Alexei V; Fan, Dingding; Yim, Sun Hee; Yao, Xiaoming; Ma, Siming; Yang, Lan; Lee, Sang-Goo; Kim, Eun Bae; Bronson, Roderick T; ?umbera, Radim; Buffenstein, Rochelle; Zhou, Xin; Krogh, Anders; Park, Thomas J; Zhang, Guojie; Wang, Jun; Gladyshev, Vadim N | Cell reports. | 2014 Sep 11; | 1354-64 | 25176646 |
| CD39 and CD161 modulate Th17 responses in Crohn's disease. | Bai, Aiping; Moss, Alan; Kokkotou, Efi; Usheva, Anny; Sun, Xiaofeng; Cheifetz, Adam; Zheng, Yi; Longhi, Maria Serena; Gao, Wenda; Wu, Yan; Robson, Simon C | Journal of immunology (Baltimore, Md. : 1950). | 2014 Oct 1; | 3366-77 | 25172498 |
| Near-infrared optical-resolution photoacoustic microscopy. | Hai, Pengfei; Yao, Junjie; Maslov, Konstantin I; Zhou, Yong; Wang, Lihong V | Optics letters | 2014 Sep 1 | 5192-5 | 25166107 |
| Nonlytic viral spread enhanced by autophagy components. | Bird, Sara Whitney; Maynard, Nathaniel D; Covert, Markus W; Kirkegaard, Karla | Proceedings of the National Academy of Sciences of the United States of America. | 2014 Sep 9; | 13081-6 | 25157142 |
| A microbial biomanufacturing platform for natural and semisynthetic opioids. | Thodey, Kate; Galanie, Stephanie; Smolke, Christina D | Nature chemical biology | 2014 Aug 24 | NULL | 25151135 |
| How lamina-associated polypeptide 1 (LAP1) activates Torsin. | Sosa, Brian A; Demircioglu, F Esra; Chen, James Z; Ingram, Jessica; Ploegh, Hidde L; Schwartz, Thomas U | eLife. | 2014; | e03239 | 25149450 |
| Methodology for image-based reconstruction of ventricular geometry for patient-specific modeling of cardiac electrophysiology. | Prakosa, A; Malamas, P; Zhang, S; Pashakhanloo, F; Arevalo, H; Herzka, D A; Lardo, A; Halperin, H; McVeigh, E; Trayanova, N; Vadakkumpadan, F | Progress in biophysics and molecular biology. | 2014 Aug; | 226-34 | 25148771 |
| Reversibly switchable fluorescence microscopy with enhanced resolution and image contrast. | Yao, Junjie; Shcherbakova, Daria M; Li, Chiye; Krumholz, Arie; Lorca, Ramon A; Reinl, Erin; England, Sarah K; Verkhusha, Vladislav V; Wang, Lihong V | Journal of biomedical optics. | 2014 Aug; | 86018 | 25144452 |
| Microcirculatory changes identified by photoacoustic microscopy in patients with complex regional pain syndrome type I after stellate ganglion blocks. | Zhou, Yong; Yi, Xiaobin; Xing, Wenxin; Hu, Song; Maslov, Konstantin I; Wang, Lihong V | Journal of biomedical optics. | 2014 Aug; | 86017 | 25144451 |
| Saturation editing of genomic regions by multiplex homology-directed repair. | Findlay, Gregory M; Boyle, Evan A; Hause, Ronald J; Klein, Jason C; Shendure, Jay | Nature. | 2014 Sep 4; | 120-3 | 25141179 |
| **T Cell Receptors Expressed by CD4(-)CD8**(-) Intraepithelial T Cells Drive Their Fate into a Unique Lineage with Unusual MHC Reactivities. | Mayans, Sofia; Stepniak, Dariusz; Palida, Sakina F; Larange, Alexandre; Dreux, Joanna; Arlian, Britni M; Shinnakasu, Ryo; Kronenberg, Mitchell; Cheroutre, Hilde; Lambolez, Florence | Immunity | 2014 Aug 21 | 207-18 | 25131531 |
| Adeno-associated virus: fit to serve. | Zinn, Eric; Vandenberghe, Luk H | Current opinion in virology. | 2014 Oct; | 90-7 | 25128609 |
| State-dependent architecture of thalamic reticular subnetworks. | Halassa, Michael M; Chen, Zhe; Wimmer, Ralf D; Brunetti, Philip M; Zhao, Shengli; Zikopoulos, Basilis; Wang, Fan; Brown, Emery N; Wilson, Matthew A | Cell. | 2014 Aug 14; | 808-21 | 25126786 |
| Prion propagation can occur in a prokaryote and requires the ClpB chaperone. | Yuan, Andy H; Garrity, Sean J; Nako, Entela; Hochschild, Ann | eLife. | 2014; | e02949 | 25122461 |
| Handheld photoacoustic microscopy to detect melanoma depth in vivo. | Zhou, Yong; Xing, Wenxin; Maslov, Konstantin I; Cornelius, Lynn A; Wang, Lihong V | Optics letters | 2014 Aug 15 | 4731-4 | 25121860 |
| CRISPR-mediated direct mutation of cancer genes in the mouse liver. | Xue, Wen; Chen, Sidi; Yin, Hao; Tammela, Tuomas; Papagiannakopoulos, Thales; Joshi, Nikhil S; Cai, Wenxin; Yang, Gillian; Bronson, Roderick; Crowley, Denise G; Zhang, Feng; Anderson, Daniel G; Sharp, Phillip A; Jacks, Tyler | Nature. | 2014 Oct 16; | 380-4 | 25119044 |
| Efficient CRISPR-Cas9-mediated genome editing in Plasmodium falciparum. | Wagner, Jeffrey C; Platt, Randall J; Goldfless, Stephen J; Zhang, Feng; Niles, Jacquin C | Nature methods. | 2014 Sep; | 915-8 | 25108687 |
| I?B kinase ? (IKBKB) mutations in lymphomas that constitutively activate canonical nuclear factor ?B (NF?B) signaling. | Kai, Xin; Chellappa, Vasant; Donado, Carlos; Reyon, Deepak; Sekigami, Yurie; Ataca, Dalya; Louissaint, Abner; Mattoo, Hamid; Joung, J Keith; Pillai, Shiv | The Journal of biological chemistry. | 2014 Sep 26; | 25107905 | |
| Label-free photoacoustic nanoscopy. | Danielli, Amos; Maslov, Konstantin; Garcia-Uribe, Alejandro; Winkler, Amy M; Li, Chiye; Wang, Lidai; Chen, Yun; Dorn 2nd, Gerald W; Wang, Lihong V | Journal of biomedical optics. | 2014 Aug; | 86006 | 25104412 |
| Zylka et al. reply. | Zylka, Mark J; Philpot, Ben D; King, Ian F | Nature. | 2014 Aug 7; | E2 | 25100485 |
| Improving the serum stability of site-specific antibody conjugates with sulfone linkers. | Patterson, James T; Asano, Shigehiro; Li, Xiuling; Rader, Christoph; Barbas 3rd, Carlos F | Bioconjugate chemistry. | 2014 Aug 20; | 1402-7 | 25099687 |
| ''Utilizing'' signal detection theory. | Lynn, Spencer K; Barrett, Lisa Feldman | Psychological science. | 2014 Sep; | 1663-73 | 25097061 |
| Promising and delivering gene therapies for vision loss. | Carvalho, Livia S; Vandenberghe, Luk H | Vision research | 2014 Aug 2 | NULL | 25094052 |
| Efficient transduction and optogenetic stimulation of retinal bipolar cells by a synthetic adeno-associated virus capsid and promoter. | Cronin, Therese; Vandenberghe, Luk H; Hantz, Peter; Juttner, Josephine; Reimann, Andreas; Kacso, Agota-Enikýý; Huckfeldt, Rachel M; Busskamp, Volker; Kohler, Hubertus; Lagali, Pamela S; Roska, Botond; Bennett, Jean | EMBO molecular medicine. | 2014 Sep; | 1175-90 | 25092770 |
| Sensory Integration in Mouse Insular Cortex Reflects GABA Circuit Maturation. | Gogolla, Nadine; Takesian, Anne E; Feng, Guoping; Fagiolini, Michela; Hensch, Takao K | Neuron | 2014 Aug 20 | 894-905 | 25088363 |
| A method for the second-site screening of K-Ras in the presence of a covalently attached first-site ligand. | Sun, Qi; Phan, Jason; Friberg, Anders R; Camper, DeMarco V; Olejniczak, Edward T; Fesik, Stephen W | Journal of biomolecular NMR. | 2014 Sep; | 4-Nov | 25087006 |
| H3K4me3 Breadth Is Linked to Cell Identity and Transcriptional Consistency. | Benayoun, Berenice A; Pollina, Elizabeth A; Ucar, Duygu; Mahmoudi, Salah; Karra, Kalpana; Wong, Edith D; Devarajan, Keerthana; Daugherty, Aaron C; Kundaje, Anshul B; Mancini, Elena; Hitz, Benjamin C; Gupta, Rakhi; Rando, Thomas A; Baker, Julie C; Snyder, | Cell | 2014 Jul 31 | 673-88 | 25083876 |
| DNA methylation dynamics of the human preimplantation embryo. | Smith, Zachary D; Chan, Michelle M; Humm, Kathryn C; Karnik, Rahul; Mekhoubad, Shila; Regev, Aviv; Eggan, Kevin; Meissner, Alexander | Nature | 2014 Jul 31 | 611-5 | 25079558 |
| Three-dimensional arbitrary trajectory scanning photoacoustic microscopy. | Yeh, Chenghung; Soetikno, Brian; Hu, Song; Maslov, Konstantin I; Wang, Lihong V | Journal of biophotonics | 2014 Jul 30 | NULL | 25077689 |
| Improved vectors and genome-wide libraries for CRISPR screening. | Sanjana, Neville E; Shalem, Ophir; Zhang, Feng | Nature methods. | 2014 Aug; | 783-4 | 25075903 |
| Neural control and modulation of swimming speed in the larval zebrafish. | Severi, Kristen E; Portugues, Ruben; Marques, Joao C; O'Malley, Donald M; Orger, Michael B; Engert, Florian | Neuron | 2014 Aug 6 | 692-707 | 25066084 |
| Differential targeting of feline photoreceptors by recombinant adeno-associated viral vectors: implications for preclinical gene therapy trials. | Minella, A L; Mowat, F M; Willett, K L; Sledge, D; Bartoe, J T; Bennett, J; Petersen-Jones, S M | Gene therapy. | 2014 Oct; | 913-20 | 25056608 |
| Processing properties of ON and OFF pathways for Drosophila motion detection. | Behnia, Rudy; Clark, Damon A; Carter, Adam G; Clandinin, Thomas R; Desplan, Claude | Nature | 2014 Aug 28 | 427-30 | 25043016 |
| Mechanism of transcriptional bursting in bacteria. | Chong, Shasha; Chen, Chongyi; Ge, Hao; Xie, X Sunney | Cell | 2014 Jul 17 | 314-26 | 25036631 |
| Structural characterization of anti-inflammatory immunoglobulin G Fc proteins. | Ahmed, Alysia A; Giddens, John; Pincetic, Andrew; Lomino, Joseph V; Ravetch, Jeffrey V; Wang, Lai-Xi; Bjorkman, Pamela J | Journal of molecular biology. | 2014 Sep 9; | 3166-79 | 25036289 |
| Arhgap36-dependent activation of Gli transcription factors. | Rack, Paul G; Ni, Jun; Payumo, Alexander Y; Nguyen, Vien; Crapster, J Aaron; Hovestadt, Volker; Kool, Marcel; Jones, David T W; Mich, John K; Firestone, Ari J; Pfister, Stefan M; Cho, Yoon-Jae; Chen, James K | Proceedings of the National Academy of Sciences of the United States of America. | 2014 Jul 29; | 25024229 | |
| Twitter: big data opportunities. | Broniatowski, David Andre; Paul, Michael J; Dredze, Mark | Science (New York, N.Y.). | 2014 Jul 11; | 25013052 | |
| Quantitative determinants of aerobic glycolysis identify flux through the enzyme GAPDH as a limiting step. | Shestov, Alexander A; Liu, Xiaojing; Ser, Zheng; Cluntun, Ahmad A; Hung, Yin P; Huang, Lei; Kim, Dongsung; Le, Anne; Yellen, Gary; Albeck, John G; Locasale, Jason W | eLife. | 2014; | 25009227 | |
| Generating human neurons in vitro and using them to understand neuropsychiatric disease. | Pa?ca, Sergiu P; Panagiotakos, Georgia; Dolmetsch, Ricardo E | Annual review of neuroscience. | 2014; | 479-501 | 25002278 |
| Proteomic mapping of the human mitochondrial intermembrane space in live cells via ratiometric APEX tagging. | Hung, Victoria; Zou, Peng; Rhee, Hyun-Woo; Udeshi, Namrata D; Cracan, Valentin; Svinkina, Tanya; Carr, Steven A; Mootha, Vamsi K; Ting, Alice Y | Molecular cell | 2014 Jul 17 | 332-41 | 25002142 |
| Stressing the limits of focal adhesion mechanosensitivity. | Oakes, Patrick W; Gardel, Margaret L | Current opinion in cell biology. | 2014 Oct; | 68-73 | 24998185 |
| A freely-moving monkey treadmill model. | D Foster, Justin; Nuyujukian, Paul; Freifeld, Oren; Gao, Hua; Walker, Ross; I Ryu, Stephen; H Meng, Teresa; Murmann, Boris; J Black, Michael; V Shenoy, Krishna | Journal of neural engineering | 2014 Aug | 46020 | 24995476 |
| Activation and measurement of free whisking in the lightly anesthetized rodent. | Moore, Jeffrey D; Deschenes, Martin; Kurnikova, Anastasia; Kleinfeld, David | Nature protocols | 2014 Aug | 1792-802 | 24992095 |
| Preparation of Single-Cell RNA-Seq Libraries for Next Generation Sequencing. | Trombetta, John J; Gennert, David; Lu, Diana; Satija, Rahul; Shalek, Alex K; Regev, Aviv | Current protocols in molecular biology. | 2014 Jul 01; | 24984854 | |
| Engineered red blood cells as carriers for systemic delivery of a wide array of functional probes. | Shi, Jiahai; Kundrat, Lenka; Pishesha, Novalia; Bilate, Angelina; Theile, Chris; Maruyama, Takeshi; Dougan, Stephanie K; Ploegh, Hidde L; Lodish, Harvey F | Proceedings of the National Academy of Sciences of the United States of America. | 2014 Jul 15; | 10131-6 | 24982154 |
| Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5' sites. | Schwartz, Schraga; Mumbach, Maxwell R; Jovanovic, Marko; Wang, Tim; Maciag, Karolina; Bushkin, G Guy; Mertins, Philipp; Ter-Ovanesyan, Dmitry; Habib, Naomi; Cacchiarelli, Davide; Sanjana, Neville E; Freinkman, Elizaveta; Pacold, Michael E; Satija, Rahul; | Cell reports | 2014 Jul 10 | 284-96 | 24981863 |
| Comparative genetics of longevity and cancer: insights from long-lived rodents. | Gorbunova, Vera; Seluanov, Andrei; Zhang, Zhengdong; Gladyshev, Vadim N; Vijg, Jan | Nature reviews. Genetics. | 2014 Aug; | 531-40 | 24981598 |
| CANDO and the infinite drug discovery frontier. | Minie, Mark; Chopra, Gaurav; Sethi, Geetika; Horst, Jeremy; White, George; Roy, Ambrish; Hatti, Kaushik; Samudrala, Ram | Drug discovery today | 2014 Jun 26 | NULL | 24980786 |
| In vivo optically encoded photoacoustic flowgraphy. | Zhang, Ruiying; Wang, Lidai; Yao, Junjie; Yeh, Cheng-Hung; Wang, Lihong V | Optics letters. | 2014 Jul 1; | 3814-7 | 24978744 |
| Continuous scanning of a time-reversed ultrasonically encoded optical focus by reflection-mode digital phase conjugation. | Suzuki, Yuta; Tay, Jian Wei; Yang, Qiang; Wang, Lihong V | Optics letters | 2014 Jun 15 | 3441-4 | 24978506 |
| The cultural evolution of emergent group-level traits. | Smaldino, Paul E | The Behavioral and brain sciences | 2014 Jun | 243-54 | 24970399 |
| Optical-Resolution Photoacoustic Microscopy for Volumetric and Spectral Analysis of Histological and Immunochemical Samples. | Zhang, Yu Shrike; Yao, Junjie; Zhang, Chi; Li, Lei; Wang, Lihong V; Xia, Younan | Angewandte Chemie (International ed. in English) | 2014 Jun 24 | NULL | 24961608 |
| Protein capsules with cross-linked, semipermeable, and enzyme-degradable surface barriers for controlled release. | Zhou, Jianhua; Hyun, Dong Choon; Liu, Hang; Wu, Hongkai; Xia, Younan | Macromolecular rapid communications. | 2014 Aug; | 1436-42 | 24957975 |
| Genomics: moving behavioural ecology beyond the phenotypic gambit. | Rittschof, Clare C; Robinson, Gene E | Animal behaviour | 2014 Jun 1 | 263-270 | 24954950 |
| High-sensitivity measurements of multiple kinase activities in live single cells. | Regot, Sergi; Hughey, Jacob J; Bajar, Bryce T; Carrasco, Silvia; Covert, Markus W | Cell | 2014 Jun 19 | 1724-34 | 24949979 |
| Genome-wide identification and functional analysis of Apobec-1 mediated C-to-U RNA editing in mouse small intestine and liver. | Blanc, Valerie; Park, Eddie; Schaefer, Sabine; Miller, Melanie; Lin, Yiing; Kennedy, Susan; Billing, Anja M; Ben Hamidane, Hisham; Graumann, Johannes; Mortazavi, Ali; Nadeau, Joseph H; Davidson, Nicholas O | Genome biology | 2014 Jun 19 | R79 | 24946870 |
| An HIV epidemic model based on viral load dynamics: value in assessing empirical trends in HIV virulence and community viral load. | Herbeck, Joshua T; Mittler, John E; Gottlieb, Geoffrey S; Mullins, James I | PLoS computational biology. | 2014 Jun; | 24945322 | |
| Elucidation of pseurotin biosynthetic pathway points to trans-acting C-methyltransferase: generation of chemical diversity. | Tsunematsu, Yuta; Fukutomi, Manami; Saruwatari, Takayoshi; Noguchi, Hiroshi; Hotta, Kinya; Tang, Yi; Watanabe, Kenji | Angewandte Chemie (International ed. in English). | 2014 Aug 4; | 8475-9 | 24939566 |
| Resident fibroblast lineages mediate pressure overload-induced cardiac fibrosis. | Moore-Morris, Thomas; Guimaraes-Camboa, Nuno; Banerjee, Indroneal; Zambon, Alexander C; Kisseleva, Tatiana; Velayoudon, Aurelie; Stallcup, William B; Gu, Yusu; Dalton, Nancy D; Cedenilla, Marta; Gomez-Amaro, Rafael; Zhou, Bin; Brenner, David A; Peterson, | The Journal of clinical investigation | 2014 Jul 1 | 2921-34 | 24937432 |
| Protein delivery using Cys2-His2 zinc-finger domains. | Gaj, Thomas; Liu, Jia; Anderson, Kimberly E; Sirk, Shannon J; Barbas 3rd, Carlos F | ACS chemical biology. | 2014 Aug 15; | 1662-7 | 24936957 |
| Vapor sensing characteristics of nanoelectromechanical chemical sensors functionalized using surface-initiated polymerization. | McCaig, Heather C; Myers, Ed; Lewis, Nathan S; Roukes, Michael L | Nano letters. | 2014 Jul 09; | 24922358 | |
| Single-cell RNA-seq reveals dynamic paracrine control of cellular variation. | Shalek, Alex K; Satija, Rahul; Shuga, Joe; Trombetta, John J; Gennert, Dave; Lu, Diana; Chen, Peilin; Gertner, Rona S; Gaublomme, Jellert T; Yosef, Nir; Schwartz, Schraga; Fowler, Brian; Weaver, Suzanne; Wang, Jing; Wang, Xiaohui; Ding, Ruihua; Raychowdhu | Nature | 2014 Jun 19 | 363-9 | 24919153 |
| Shh-proteoglycan interactions regulate maturation of olfactory glomerular circuitry. | Persson, Laura; Witt, Rochelle M; Galligan, Meghan; Greer, Paul L; Eisner, Adriana; Pazyra-Murphy, Maria F; Datta, Sandeep R; Segal, Rosalind A | Developmental neurobiology | 2014 Jun 10 | NULL | 24913191 |
| Differences in neural circuitry guiding behavioral responses to polarized light presented to either the dorsal or ventral retina in Drosophila. | Velez, Mariel M; Gohl, Daryl; Clandinin, Thomas R; Wernet, Mathias F | Journal of neurogenetics. | 2014 Sep-Dec; | 348-60 | 24912584 |
| Gender moderates the effect of oxytocin on social judgments. | Hoge, Elizabeth A; Anderson, Eric; Lawson, Elizabeth A; Bui, Eric; Fischer, Laura E; Khadge, Shradha D; Barrett, Lisa Feldman; Simon, Naomi M | Human psychopharmacology | 2014 May | 299-304 | 24911580 |
| Eosinophils and type 2 cytokine signaling in macrophages orchestrate development of functional beige fat. | Qiu, Yifu; Nguyen, Khoa D; Odegaard, Justin I; Cui, Xiaojin; Tian, Xiaoyu; Locksley, Richard M; Palmiter, Richard D; Chawla, Ajay | Cell | 2014 Jun 5 | 1292-308 | 24906148 |
| Development and applications of CRISPR-Cas9 for genome engineering. | Hsu, Patrick D; Lander, Eric S; Zhang, Feng | Cell. | 2014 Jun 5; | 1262-78 | 24906146 |
| Photoacoustic microscopy and computed tomography: from bench to bedside. | Wang, Lihong V; Gao, Liang | Annual review of biomedical engineering | 2014 Jul 11 | 155-85 | 24905877 |
| Measuring Fate and Rate of Single-Molecule Competition of Amplification and Restriction Digestion, and Its Use for Rapid Genotyping Tested with Hepatitis C Viral RNA. | Sun, Bing; Rodriguez-Manzano, Jesus; Selck, David A; Khorosheva, Eugenia; Karymov, Mikhail A; Ismagilov, Rustem F | Angewandte Chemie (International ed. in English) | 2014 Jun 2 | NULL | 24889060 |
| Catheter-based photoacoustic endoscope. | Yang, Joon-Mo; Li, Chiye; Chen, Ruimin; Zhou, Qifa; Shung, K Kirk; Wang, Lihong V | Journal of biomedical optics. | 2014 Jun; | 66001 | 24887743 |
| Leptin signaling in astrocytes regulates hypothalamic neuronal circuits and feeding. | Kim, Jae Geun; Suyama, Shigetomo; Koch, Marco; Jin, Sungho; Argente-Arizon, Pilar; Argente, Jesus; Liu, Zhong-Wu; Zimmer, Marcelo R; Jeong, Jin Kwon; Szigeti-Buck, Klara; Gao, Yuanqing; Garcia-Caceres, Cristina; Yi, Chun-Xia; Salmaso, Natalina; Vaccarino, | Nature neuroscience | 2014 Jul | 908-10 | 24880214 |
| Synthetic zinc finger proteins: the advent of targeted gene regulation and genome modification technologies. | Gersbach, Charles A; Gaj, Thomas; Barbas 3rd, Carlos F | Accounts of chemical research. | 2014 Aug 19; | 2309-18 | 24877793 |
| Amygdala task-evoked activity and task-free connectivity independently contribute to feelings of arousal. | Touroutoglou, Alexandra; Bickart, Kevin C; Barrett, Lisa Feldman; Dickerson, Bradford C | Human brain mapping. | 2014 Oct; | 5316-27 | 24862171 |
| Oncogenic transformation of diverse gastrointestinal tissues in primary organoid culture. | Li, Xingnan; Nadauld, Lincoln; Ootani, Akifumi; Corney, David C; Pai, Reetesh K; Gevaert, Olivier; Cantrell, Michael A; Rack, Paul G; Neal, James T; Chan, Carol W-M; Yeung, Trevor; Gong, Xue; Yuan, Jenny; Wilhelmy, Julie; Robine, Sylvie; Attardi, Laura D; | Nature medicine | 2014 Jul | 769-77 | 24859528 |
| Oncogenic transformation of diverse gastrointestinal tissues in primary organoid culture. | Li, Xingnan; Nadauld, Lincoln; Ootani, Akifumi; Corney, David C; Pai, Reetesh K; Gevaert, Olivier; Cantrell, Michael A; Rack, Paul G; Neal, James T; Chan, Carol W-M; Yeung, Trevor; Gong, Xue; Yuan, Jenny; Wilhelmy, Julie; Robine, Sylvie; Attardi, Laura D; | Nature medicine | 2014 May 25 | NULL | 24859528 |
| Two-photon neuronal and astrocytic stimulation with azobenzene-based photoswitches. | Izquierdo-Serra, Mercè; Gascón-Moya, Marta; Hirtz, Jan J; Pittolo, Silvia; Poskanzer, Kira E; Ferrer, Èric; Alibés, Ramon; Busqué, Félix; Yuste, Rafael; Hernando, Jordi; Gorostiza, Pau | Journal of the American Chemical Society. | 2014 Jun 18; | 8693-701 | 24857186 |
| Image-based left ventricular shape analysis for sudden cardiac death risk stratification. | Vadakkumpadan, Fijoy; Trayanova, Natalia; Wu, Katherine C | Heart rhythm : the official journal of the Heart Rhythm Society. | 2014 Oct; | 1693-700 | 24854217 |
| Fungal Polyketide Synthase Product Chain-Length Control by Partnering Thiohydrolase. | Zabala, Angelica O; Chooi, Yit-Heng; Choi, Moon Seok; Lin, Hsiao-Ching; Tang, Yi | ACS chemical biology | 2014 May 29 | NULL | 24845309 |
| Astrocytes and Huntington's disease. | Khakh, Baljit S; Sofroniew, Michael V | ACS chemical neuroscience. | 2014 Jul 16; | 494-6 | 24842291 |
| A carbonate-forming Baeyer-Villiger monooxygenase. | Hu, Youcai; Dietrich, David; Xu, Wei; Patel, Ashay; Thuss, Justin A J; Wang, Jingjing; Yin, Wen-Bing; Qiao, Kangjian; Houk, K N; Vederas, John C; Tang, Yi | Nature chemical biology | 2014 May 18 | NULL | 24838010 |
| Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy. | Prevedel, Robert; Yoon, Young-Gyu; Hoffmann, Maximilian; Pak, Nikita; Wetzstein, Gordon; Kato, Saul; Schrodel, Tina; Raskar, Ramesh; Zimmer, Manuel; Boyden, Edward S; Vaziri, Alipasha | Nature methods | 2014 May 18 | NULL | 24836920 |
| Gender differences in oxytocin-associated disruption of decision bias during emotion perception. | Lynn, Spencer K; Hoge, Elizabeth A; Fischer, Laura E; Barrett, Lisa Feldman; Simon, Naomi M | Psychiatry research | 2014 Apr 26 | NULL | 24814142 |
| Walking Drosophila align with the e-vector of linearly polarized light through directed modulation of angular acceleration. | Velez, Mariel M; Wernet, Mathias F; Clark, Damon A; Clandinin, Thomas R | Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology | 2014 Jun | 603-14 | 24810784 |
| Nerve guidance conduits based on double-layered scaffolds of electrospun nanofibers for repairing the peripheral nervous system. | Xie, Jingwei; MacEwan, Matthew R; Liu, Wenying; Jesuraj, Nithya; Li, Xiaoran; Hunter, Daniel; Xia, Younan | ACS applied materials & interfaces | 2014 Jun 25 | 9472-80 | 24806389 |
| Antibiotics induce redox-related physiological alterations as part of their lethality. | Dwyer, Daniel J; Belenky, Peter A; Yang, Jason H; MacDonald, I Cody; Martell, Jeffrey D; Takahashi, Noriko; Chan, Clement T Y; Lobritz, Michael A; Braff, Dana; Schwarz, Eric G; Ye, Jonathan D; Pati, Mekhala; Vercruysse, Maarten; Ralifo, Paul S; Allison, K | Proceedings of the National Academy of Sciences of the United States of America | 2014 May 20 | E2100-9 | 24803433 |
| New insights into defibrillation of the heart from realistic simulation studies. | Trayanova, Natalia A; Rantner, Lukas J | Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology. | 2014 May; | 705-13 | 24798960 |
| Loss of *-catenin triggers oxidative stress and impairs hematopoietic regeneration. | Lento, William; Ito, Takahiro; Zhao, Chen; Harris, Jeffrey R; Huang, Wei; Jiang, Chen; Owzar, Kouros; Piryani, Sadhna; Racioppi, Luigi; Chao, Nelson; Reya, Tannishtha | Genes & development | 2014 May 1 | 995-1004 | 24788518 |
| Global microRNA depletion suppresses tumor angiogenesis. | Chen, Sidi; Xue, Yuan; Wu, Xuebing; Le, Cong; Bhutkar, Arjun; Bell, Eric L; Zhang, Feng; Langer, Robert; Sharp, Phillip A | Genes & development. | 2014 May 15; | 1054-67 | 24788094 |
| Inter-individual variation in DNA repair capacity: A need for multi-pathway functional assays to promote translational DNA repair research. | Nagel, Zachary D; Chaim, Isaac A; Samson, Leona D | DNA repair | 2014 Apr 26 | NULL | 24780560 |
| Somatic mutation as a mechanism of Wnt/*-catenin pathway activation in CLL. | Wang, Lili; Shalek, Alex K; Lawrence, Mike; Ding, Ruihua; Gaublomme, Jellert T; Pochet, Nathalie; Stojanov, Petar; Sougnez, Carrie; Shukla, Sachet A; Stevenson, Kristen E; Zhang, Wandi; Wong, Jessica; Sievers, Quinlan L; MacDonald, Bryan T; Vartanov, Alexander R; Goldstein, Natalie R; Neuberg, Donna; He, Xi; Lander, Eric; Hacohen, Nir; Regev, Aviv; Getz, Gad; Brown, Jennifer R; Park, Hongkun; Wu, Catherine J | Blood. | 2014 Aug 14; | 1089-98 | 24778153 |
| Chronic, wireless recordings of large-scale brain activity in freely moving rhesus monkeys. | Schwarz, David A; Lebedev, Mikhail A; Hanson, Timothy L; Dimitrov, Dragan F; Lehew, Gary; Meloy, Jim; Rajangam, Sankaranarayani; Subramanian, Vivek; Ifft, Peter J; Li, Zheng; Ramakrishnan, Arjun; Tate, Andrew; Zhuang, Katie Z; Nicolelis, Miguel A L | Nature methods | 2014 Jun | 670-6 | 24776634 |
| Simultaneous imaging of neural activity in three dimensions. | Quirin, Sean; Jackson, Jesse; Peterka, Darcy S; Yuste, Rafael | Frontiers in neural circuits. | 2014; | 29 | 24772066 |
| Dimeric CRISPR RNA-guided FokI nucleases for highly specific genome editing. | Tsai, Shengdar Q; Wyvekens, Nicolas; Khayter, Cyd; Foden, Jennifer A; Thapar, Vishal; Reyon, Deepak; Goodwin, Mathew J; Aryee, Martin J; Joung, J Keith | Nature biotechnology | 2014 Jun | 569-76 | 24770325 |
| Constant growth rate can be supported by decreasing energy flux and increasing aerobic glycolysis. | Slavov, Nikolai; Budnik, Bogdan A; Schwab, David; Airoldi, Edoardo M; van Oudenaarden, Alexander | Cell reports | 2014 May 8 | 705-14 | 24767987 |
| A PKA activity sensor for quantitative analysis of endogenous GPCR signaling via 2-photon FRET-FLIM imaging. | Chen, Yao; Saulnier, Jessica L; Yellen, Gary; Sabatini, Bernardo L | Frontiers in pharmacology | 2014 | 56 | 24765076 |
| Mathematical approaches to understanding and imaging atrial fibrillation: significance for mechanisms and management. | Trayanova, Natalia A | Circulation research. | 2014 Apr 25; | 1516-31 | 24763468 |
| Vasoactive intestinal polypeptide mediates circadian rhythms in mammalian olfactory bulb and olfaction. | Miller, Jae-Eun Kang; Granados-Fuentes, Daniel; Wang, Thomas; Marpegan, Luciano; Holy, Timothy E; Herzog, Erik D | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2014 Apr 23 | 6040-6 | 24760863 |
| Imaging neural spiking in brain tissue using FRET-opsin protein voltage sensors. | Gong, Yiyang; Wagner, Mark J; Zhong Li, Jin; Schnitzer, Mark J | Nature communications | 2014 | 3674 | 24755708 |
| Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells. | Wu, Xuebing; Scott, David A; Kriz, Andrea J; Chiu, Anthony C; Hsu, Patrick D; Dadon, Daniel B; Cheng, Albert W; Trevino, Alexandro E; Konermann, Silvana; Chen, Sidi; Jaenisch, Rudolf; Zhang, Feng; Sharp, Phillip A | Nature biotechnology. | 2014 Jul; | 670-6 | 24752079 |
| Population code in mouse V1 facilitates readout of natural scenes through increased sparseness. | Froudarakis, Emmanouil; Berens, Philipp; Ecker, Alexander S; Cotton, R James; Sinz, Fabian H; Yatsenko, Dimitri; Saggau, Peter; Bethge, Matthias; Tolias, Andreas S | Nature neuroscience | 2014 Jun | 851-7 | 24747577 |
| Small-molecule RORýýt antagonists inhibit T helper 17 cell transcriptional network by divergent mechanisms. | Xiao, Sheng; Yosef, Nir; Yang, Jianfei; Wang, Yonghui; Zhou, Ling; Zhu, Chen; Wu, Chuan; Baloglu, Erkan; Schmidt, Darby; Ramesh, Radha; Lobera, Mercedes; Sundrud, Mark S; Tsai, Pei-Yun; Xiang, Zhijun; Wang, Jinsong; Xu, Yan; Lin, Xichen; Kretschmer, Karst | Immunity | 2014 Apr 17 | 477-89 | 24745332 |
| Synthetic RNA switches for yeast metabolic engineering: screening recombinant enzyme libraries. | Michener, Joshua K; Smolke, Christina D | Methods in molecular biology (Clifton, N.J.). | 2014; | 125-36 | 24744030 |
| Conditions and constraints for astrocyte calcium signaling in the hippocampal mossy fiber pathway. | Haustein, Martin D; Kracun, Sebastian; Lu, Xiao-Hong; Shih, Tiffany; Jackson-Weaver, Olan; Tong, Xiaoping; Xu, Ji; Yang, X William; O'Dell, Thomas J; Marvin, Jonathan S; Ellisman, Mark H; Bushong, Eric A; Looger, Loren L; Khakh, Baljit S | Neuron. | 2014 Apr 16; | 413-29 | 24742463 |
| Representing sex in the brain, one module at a time. | Yang, Cindy F; Shah, Nirao M | Neuron | 2014 Apr 16 | 261-78 | 24742456 |
| Protein-to-mRNA Ratios Are Conserved between Pseudomonas aeruginosa Strains. | Kwon, Taejoon; Huse, Holly K; Vogel, Christine; Whiteley, Marvin; Marcotte, Edward M | Journal of proteome research | 2014 Apr 17 | NULL | 24742327 |
| Navigational strategies underlying phototaxis in larval zebrafish. | Chen, Xiuye; Engert, Florian | Frontiers in systems neuroscience. | 2014; | 24723859 | |
| Calibration-free structured-illumination photoacoustic flowgraphy of transverse flow in scattering media. | Yao, Junjie; Gilson, Rebecca C; Maslov, Konstantin I; Wang, Lidai; Wang, Lihong V | Journal of biomedical optics | 2014 Apr | 46007 | 24718385 |
| Perceptions of emotion from facial expressions are not culturally universal: evidence from a remote culture. | Gendron, Maria; Roberson, Debi; van der Vyver, Jacoba Marietta; Barrett, Lisa Feldman | Emotion (Washington, D.C.) | 2014 Apr | 251-62 | 24708506 |
| cAMP-PKA phosphorylation of tau confers risk for degeneration in aging association cortex. | Carlyle, Becky C; Nairn, Angus C; Wang, Min; Yang, Yang; Jin, Lu E; Simen, Arthur A; Ramos, Brian P; Bordner, Kelly A; Craft, George E; Davies, Peter; Pletikos, Mihovil; ?estan, Nenad; Arnsten, Amy F T; Paspalas, Constantinos D | Proceedings of the National Academy of Sciences of the United States of America. | 2014 Apr 1; | 5036-41 | 24707050 |
| Pathways Disrupted in Human ALS Motor Neurons Identified through Genetic Correction of Mutant SOD1. | Kiskinis, Evangelos; Sandoe, Jackson; Williams, Luis A; Boulting, Gabriella L; Moccia, Rob; Wainger, Brian J; Han, Steve; Peng, Theodore; Thams, Sebastian; Mikkilineni, Shravani; Mellin, Cassidy; Merkle, Florian T; Davis-Dusenbery, Brandi N; Ziller, Micha | Cell stem cell | 2014 Jun 5 | 781-95 | 24704492 |
| Influenza A H1N1 pandemic strain evolution--divergence and the potential for antigenic drift variants. | Klein, Eili Y; Serohijos, Adrian W R; Choi, Jeong-Mo; Shakhnovich, Eugene I; Pekosz, Andrew | PloS one | 2014 | e93632 | 24699432 |
| State dependence of noise correlations in macaque primary visual cortex. | Ecker, Alexander S; Berens, Philipp; Cotton, R James; Subramaniyan, Manivannan; Denfield, George H; Cadwell, Cathryn R; Smirnakis, Stelios M; Bethge, Matthias; Tolias, Andreas S | Neuron | 2014 Apr 2 | 235-48 | 24698278 |
| Chaperones and cardiac misfolding protein diseases. | Christians, Elisabeth S; Mustafi, Soumyajit B; Benjamin, Ivor J | Current protein & peptide science | 2014 May | 189-204 | 24694370 |
| Urogenital photoacoustic endoscope. | Li, Chiye; Yang, Joon-Mo; Chen, Ruimin; Yeh, Cheng-Hung; Zhu, Liren; Maslov, Konstantin; Zhou, Qifa; Kirk Shung, K; Wang, Lihong V | Optics letters | 2014 Mar 15 | 1473-6 | 24690816 |
| Improved in vitro efficacy of gold nanoconstructs by increased loading of G-quadruplex aptamer. | Dam, Duncan Hieu M; Lee, Raymond C; Odom, Teri W | Nano letters | 2014 May 14 | 2843-8 | 24689438 |
| Astrocyte Kir4.1 ion channel deficits contribute to neuronal dysfunction in Huntington's disease model mice. | Tong, Xiaoping; Ao, Yan; Faas, Guido C; Nwaobi, Sinifunanya E; Xu, Ji; Haustein, Martin D; Anderson, Mark A; Mody, Istvan; Olsen, Michelle L; Sofroniew, Michael V; Khakh, Baljit S | Nature neuroscience. | 2014 May; | 694-703 | 24686787 |
| Fully motorized optical-resolution photoacoustic microscopy. | Li, Lei; Yeh, Chenghung; Hu, Song; Wang, Lidai; Soetikno, Brian T; Chen, Ruimin; Zhou, Qifa; Shung, K Kirk; Maslov, Konstantin I; Wang, Lihong V | Optics letters | 2014 Apr 1 | 2117-20 | 24686689 |
| Comparison of the theoretical and real-world evolutionary potential of a genetic circuit. | Razo-Mejia, M; Boedicker, J Q; Jones, D; Deluna, A; Kinney, J B; Phillips, R | Physical biology | 2014 Apr | 26005 | 24685590 |
| Proteomic identification of monoclonal antibodies from serum. | Boutz, Daniel R; Horton, Andrew P; Wine, Yariv; Lavinder, Jason J; Georgiou, George; Marcotte, Edward M | Analytical chemistry | 2014 May 20 | 4758-66 | 24684310 |
| Transcriptional profiling of cells sorted by RNA abundance. | Klemm, Sandy; Semrau, Stefan; Wiebrands, Kay; Mooijman, Dylan; Faddah, Dina A; Jaenisch, Rudolf; van Oudenaarden, Alexander | Nature methods | 2014 May | 549-51 | 24681693 |
| Signaling by IL-6 promotes alternative activation of macrophages to limit endotoxemia and obesity-associated resistance to insulin. | Mauer, Jan; Chaurasia, Bhagirath; Goldau, Julia; Vogt, Merly C; Ruud, Johan; Nguyen, Khoa D; Theurich, Sebastian; Hausen, A Christine; Schmitz, Joel; Bronneke, Hella S; Estevez, Emma; Allen, Tamara L; Mesaros, Andrea; Partridge, Linda; Febbraio, Mark A; C | Nature immunology | 2014 May | 423-30 | 24681566 |
| Minireview: Metabolism of female reproduction: regulatory mechanisms and clinical implications. | Seli, Emre; Babayev, Elnur; Collins, Stephen C; Nemeth, Gabor; Horvath, Tamas L | Molecular endocrinology (Baltimore, Md.) | 2014 Jun | 790-804 | 24678733 |
| Using SV119-Gold Nanocage Conjugates to Eradicate Cancer Stem Cells Through a Combination of Photothermal and Chemo Therapies. | Sun, Tianmeng; Wang, Yi; Wang, Yucai; Xu, Jinbin; Zhao, Xin; Vangveravong, Suwanna; Mach, Robert H; Xia, Younan | Advanced healthcare materials | 2014 Mar 26 | NULL | 24677807 |
| REST and stress resistance in ageing and Alzheimer's disease. | Lu, Tao; Aron, Liviu; Zullo, Joseph; Pan, Ying; Kim, Haeyoung; Chen, Yiwen; Yang, Tun-Hsiang; Kim, Hyun-Min; Drake, Derek; Liu, X Shirley; Bennett, David A; Colaiacovo, Monica P; Yankner, Bruce A | Nature | 2014 Mar 27 | 448-54 | 24670762 |
| An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge. | Brownstein, Catherine A; Beggs, Alan H; Homer, Nils; Merriman, Barry; Yu, Timothy W; Flannery, Katherine C; DeChene, Elizabeth T; Towne, Meghan C; Savage, Sarah K; Price, Emily N; Holm, Ingrid A; Luquette, Lovelace J; Lyon, Elaine; Majzoub, Joseph; Neupert, Peter; McCallie Jr, David; Szolovits, Peter; Willard, Huntington F; Mendelsohn, Nancy J; Temme, Renee; Finkel, Richard S; Yum, Sabrina W; Medne, Livija; Sunyaev, Shamil R; Adzhubey, Ivan; Cassa, Christopher A; de Bakker, Paul I W; Duzkale, Hatice; Dworzy?ski, Piotr; Fairbrother, William; Francioli, Laurent; Funke, Birgit H; Giovanni, Monica A; Handsaker, Robert E; Lage, Kasper; Lebo, Matthew S; Lek, Monkol; Leshchiner, Ignaty; MacArthur, Daniel G; McLaughlin, Heather M; Murray, Michael F; Pers, Tune H; Polak, Paz P; Raychaudhuri, Soumya; Rehm, Heidi L; Soemedi, Rachel; Stitziel, Nathan O; Vestecka, Sara; Supper, Jochen; Gugenmus, Claudia; Klocke, Bernward; Hahn, Alexander; Schubach, Max; Menzel, Mortiz; Biskup, Saskia; Freisinger, Peter; Deng, Mario; Braun, Martin; Perner, Sven; Smith, Richard J H; Andorf, Janeen L; Huang, Jian; Ryckman, Kelli; Sheffield, Val C; Stone, Edwin M; Bair, Thomas; Black-Ziegelbein, E Ann; Braun, Terry A; Darbro, Benjamin; DeLuca, Adam P; Kolbe, Diana L; Scheetz, Todd E; Shearer, Aiden E; Sompallae, Rama; Wang, Kai; Bassuk, Alexander G; Edens, Erik; Mathews, Katherine; Moore, Steven A; Shchelochkov, Oleg A; Trapane, Pamela; Bossler, Aaron; Campbell, Colleen A; Heusel, Jonathan W; Kwitek, Anne; Maga, Tara; Panzer, Karin; Wassink, Thomas; Van Daele, Douglas; Azaiez, Hela; Booth, Kevin; Meyer, Nic; Segal, Michael M; Williams, Marc S; Tromp, Gerard; White, Peter; Corsmeier, Donald; Fitzgerald-Butt, Sara; Herman, Gail; Lamb-Thrush, Devon; McBride, Kim L; Newsom, David; Pierson, Christopher R; Rakowsky, Alexander T; Maver, Ale?; Lovre?i?, Luca; Palanda?i?, Anja; Peterlin, Borut; Torkamani, Ali; Wedell, Anna; Huss, Mikael; Alexeyenko, Andrey; Lindvall, Jessica M; Magnusson, Måns; Nilsson, Daniel; Stranneheim, Henrik; Taylan, Fulya; Gilissen, Christian; Hoischen, Alexander; van Bon, Bregje; Yntema, Helger; Nelen, Marcel; Zhang, Weidong; Sager, Jason; Zhang, Lu; Blair, Kathryn; Kural, Deniz; Cariaso, Michael; Lennon, Greg G; Javed, Asif; Agrawal, Saloni; Ng, Pauline C; Sandhu, Komal S; Krishna, Shuba; Veeramachaneni, Vamsi; Isakov, Ofer; Halperin, Eran; Friedman, Eitan; Shomron, Noam; Glusman, Gustavo; Roach, Jared C; Caballero, Juan; Cox, Hannah C; Mauldin, Denise; Ament, Seth A; Rowen, Lee; Richards, Daniel R; San Lucas, F Anthony; Gonzalez-Garay, Manuel L; Caskey, C Thomas; Bai, Yu; Huang, Ying; Fang, Fang; Zhang, Yan; Wang, Zhengyuan; Barrera, Jorge; Garcia-Lobo, Juan M; González-Lamuño, Domingo; Llorca, Javier; Rodriguez, Maria C; Varela, Ignacio; Reese, Martin G; De La Vega, Francisco M; Kiruluta, Edward; Cargill, Michele; Hart, Reece K; Sorenson, Jon M; Lyon, Gholson J; Stevenson, David A; Bray, Bruce E; Moore, Barry M; Eilbeck, Karen; Yandell, Mark; Zhao, Hongyu; Hou, Lin; Chen, Xiaowei; Yan, Xiting; Chen, Mengjie; Li, Cong; Yang, Can; Gunel, Murat; Li, Peining; Kong, Yong; Alexander, Austin C; Albertyn, Zayed I; Boycott, Kym M; Bulman, Dennis E; Gordon, Paul M K; Innes, A Micheil; Knoppers, Bartha M; Majewski, Jacek; Marshall, Christian R; Parboosingh, Jillian S; Sawyer, Sarah L; Samuels, Mark E; Schwartzentruber, Jeremy; Kohane, Isaac S; Margulies, David M | Genome biology. | 2014 Mar 25; | 24667040 | |
| The new century of the brain. | Yuste, Rafael; Church, George M | Scientific American. | 2014 Mar; | 38-45 | 24660326 |
| The Determinants of Federal and State Enforcement of Workplace Safety Regulations: OSHA Inspections 1990-2010. | Jung, Juergen; Makowsky, Michael D | Journal of regulatory economics | 2014 Feb 1 | Jan-33 | 24659856 |
| Optimizing cardiac resynchronization therapy to minimize ATP consumption heterogeneity throughout the left ventricle: a simulation analysis using a canine heart failure model. | Hu, Yuxuan; Gurev, Viatcheslav; Constantino, Jason; Trayanova, Natalia | Heart rhythm : the official journal of the Heart Rhythm Society. | 2014 Jun; | 1063-9 | 24657430 |
| Whole-brain activity maps reveal stereotyped, distributed networks for visuomotor behavior. | Portugues, Ruben; Feierstein, Claudia E; Engert, Florian; Orger, Michael B | Neuron | 2014 Mar 19 | 1328-43 | 24656252 |
| Metabolic regulation of immune responses. | Ganeshan, Kirthana; Chawla, Ajay | Annual review of immunology | 2014 | 609-34 | 24655299 |
| Intention estimation in brain-machine interfaces. | Fan, Joline M; Nuyujukian, Paul; Kao, Jonathan C; Chestek, Cynthia A; Ryu, Stephen I; Shenoy, Krishna V | Journal of neural engineering | 2014 Feb | 16004 | 24654266 |
| Genetically encoded molecular probes to visualize and perturb signaling dynamics in living biological systems. | Sample, Vedangi; Mehta, Sohum; Zhang, Jin | Journal of cell science | 2014 Mar 15 | 1151-60 | 24634506 |
| Reconstitution of contractile actomyosin arrays. | Murrell, Michael; Thoresen, Todd; Gardel, Margaret | Methods in enzymology. | 2014; | 265-82 | 24630112 |
| Realizing the potential of synthetic biology. | Church, George M; Elowitz, Michael B; Smolke, Christina D; Voigt, Christopher A; Weiss, Ron | Nature reviews. Molecular cell biology. | 2014 Apr; | 289-94 | 24622617 |
| Plasmonics-enhanced and optically modulated delivery of gold nanostars into brain tumor. | Yuan, Hsiangkuo; Wilson, Christy M; Xia, Jun; Doyle, Sarah L; Li, Shuqin; Fales, Andrew M; Liu, Yang; Ozaki, Ema; Mulfaul, Kelly; Hanna, Gabi; Palmer, Gregory M; Wang, Lihong V; Grant, Gerald A; Vo-Dinh, Tuan | Nanoscale | 2014 Apr 21 | 4078-82 | 24619405 |
| Subunit composition of glutamate and gamma-aminobutyric acid receptors in status epilepticus. | Loddenkemper, Tobias; Talos, Delia M; Cleary, Ryan T; Joseph, Annelise; Sanchez Fernandez, Ivan; Alexopoulos, Andreas; Kotagal, Prakash; Najm, Imad; Jensen, Frances E | Epilepsy research | 2014 May | 605-15 | 24613745 |
| The transcription factor titration effect dictates level of gene expression. | Brewster, Robert C; Weinert, Franz M; Garcia, Hernan G; Song, Dan; Rydenfelt, Mattias; Phillips, Rob | Cell | 2014 Mar 13 | 1312-23 | 24612990 |
| CMV Infection, TLR-2 and -4 Expression, and Cytokine Profiles in Early-Onset Preeclampsia with HELLP Syndrome. | Xie, Fang; von Dadelszen, Peter; Nadeau, Joseph | American journal of reproductive immunology (New York, N.Y. : 1989) | 2014 Feb 24 | NULL | 24612145 |
| Enhancing the specificity of recombinase-mediated genome engineering through dimer interface redesign. | Gaj, Thomas; Sirk, Shannon J; Tingle, Ryan D; Mercer, Andrew C; Wallen, Mark C; Barbas 3rd, Carlos F | Journal of the American Chemical Society | 2014 Apr 2 | 5047-56 | 24611715 |
| Cross-linking in the silks of bees, ants and hornets. | Campbell, Peter M; Trueman, Holly E; Zhang, Qiang; Kojima, Katsura; Kameda, Tsunenori; Sutherland, Tara D | Insect biochemistry and molecular biology | 2014 May | 40-50 | 24607851 |
| Dependence of optical scattering from Intralipid in gelatin-gel based tissue-mimicking phantoms on mixing temperature and time. | Lai, Puxiang; Xu, Xiao; Wang, Lihong V | Journal of biomedical optics | 2014 Mar | 35002 | 24604534 |
| Common genetic variants modulate pathogen-sensing responses in human dendritic cells. | Lee, Mark N; Ye, Chun; Villani, Alexandra-Chloe; Raj, Towfique; Li, Weibo; Eisenhaure, Thomas M; Imboywa, Selina H; Chipendo, Portia I; Ran, F Ann; Slowikowski, Kamil; Ward, Lucas D; Raddassi, Khadir; McCabe, Cristin; Lee, Michelle H; Frohlich, Irene Y; H | Science (New York, N.Y.) | 2014 Mar 7 | 1246980 | 24604203 |
| Medicine. Combating evolution to fight disease. | Rosenberg, Susan M; Queitsch, Christine | Science (New York, N.Y.) | 2014 Mar 7 | 1088-9 | 24604189 |
| Maternal nutrition induces pervasive gene expression changes but no detectable DNA methylation differences in the liver of adult offspring. | Cannon, Matthew V; Buchner, David A; Hester, James; Miller, Hadley; Sehayek, Ephraim; Nadeau, Joseph H; Serre, David | PloS one | 2014 | e90335 | 24594983 |
| Recasting the theory of mosquito-borne pathogen transmission dynamics and control. | Smith, David L; Perkins, T Alex; Reiner Jr, Robert C; Barker, Christopher M; Niu, Tianchan; Chaves, Luis Fernando; Ellis, Alicia M; George, Dylan B; Le Menach, Arnaud; Pulliam, Juliet R C; Bisanzio, Donal; Buckee, Caroline; Chiyaka, Christinah; Cummings, | Transactions of the Royal Society of Tropical Medicine and Hygiene | 2014 Apr | 185-97 | 24591453 |
| Calibration-free absolute quantification of particle concentration by statistical analyses of photoacoustic signals in vivo. | Zhou, Yong; Yao, Junjie; Maslov, Konstantin I; Wang, Lihong V | Journal of biomedical optics | 2014 Mar | 37001 | 24589987 |
| Integrated photoacoustic, confocal, and two-photon microscope. | Rao, Bin; Soto, Florentina; Kerschensteiner, Daniel; Wang, Lihong V | Journal of biomedical optics | 2014 Mar | 36002 | 24589986 |
| Pharmacokinetics of natural and engineered secreted factors delivered by mesenchymal stromal cells. | Elman, Jessica S; Murray, Ryan C; Murray, Ryan M; Wang, Fangjing; Shen, Keyue; Gao, Shan; Conway, Kevin E; Yarmush, Martin L; Tannous, Bakhos A; Weissleder, Ralph; Parekkadan, Biju | PloS one. | 2014; | 24587097 | |
| CRISPR-Cas systems for editing, regulating and targeting genomes. | Sander, Jeffry D; Joung, J Keith | Nature biotechnology | 2014 Apr | 347-55 | 24584096 |
| Lestaurtinib (CEP-701) attenuates "second hit" kainic acid-induced seizures following early life hypoxic seizures. | Obeid, Makram; Rosenberg, Evan C; Klein, Peter M; Jensen, Frances E | Epilepsy research | 2014 May | 806-10 | 24582454 |
| Statistical mechanical model of coupled transcription from multiple promoters due to transcription factor titration. | Rydenfelt, Mattias; Cox, Robert Sidney; Garcia, Hernan; Phillips, Rob | Physical review. E, Statistical, nonlinear, and soft matter physics | 2014 Jan | 12702 | 24580252 |
| Generation of complexity in fungal terpene biosynthesis: discovery of a multifunctional cytochrome P450 in the fumagillin pathway. | Lin, Hsiao-Ching; Tsunematsu, Yuta; Dhingra, Sourabh; Xu, Wei; Fukutomi, Manami; Chooi, Yit-Heng; Cane, David E; Calvo, Ana M; Watanabe, Kenji; Tang, Yi | Journal of the American Chemical Society | 2014 Mar 19 | 4426-36 | 24568283 |
| The future of whole-cell modeling. | Macklin, Derek N; Ruggero, Nicholas A; Covert, Markus W | Current opinion in biotechnology | 2014 Feb 17 | 111-115 | 24556244 |
| Approach for targeting Ras with small molecules that activate SOS-mediated nucleotide exchange. | Burns, Michael C; Sun, Qi; Daniels, R Nathan; Camper, DeMarco; Kennedy, J Phillip; Phan, Jason; Olejniczak, Edward T; Lee, Taekyu; Waterson, Alex G; Rossanese, Olivia W; Fesik, Stephen W | Proceedings of the National Academy of Sciences of the United States of America | 2014 Mar 4 | 3401-6 | 24550516 |
| Kinetic and equilibrium binding characterization of aptamers to small molecules using a label-free, sensitive, and scalable platform. | Chang, Andrew L; McKeague, Maureen; Liang, Joe C; Smolke, Christina D | Analytical chemistry. | 2014 Apr 1; | 3273-8 | 24548121 |
| fast_protein_cluster: parallel and optimized clustering of large-scale protein modeling data. | Hung, Ling-Hong; Samudrala, Ram | Bioinformatics (Oxford, England) | 2014 Jun 15 | 1774-6 | 24532722 |
| Verapamil, and its metabolite norverapamil, inhibit macrophage-induced, bacterial efflux pump-mediated tolerance to multiple anti-tubercular drugs. | Adams, Kristin N; Szumowski, John D; Ramakrishnan, Lalita | The Journal of infectious diseases. | 2014 Aug 1; | 456-66 | 24532601 |
| Broad specificity profiling of TALENs results in engineered nucleases with improved DNA-cleavage specificity. | Guilinger, John P; Pattanayak, Vikram; Reyon, Deepak; Tsai, Shengdar Q; Sander, Jeffry D; Joung, J Keith; Liu, David R | Nature methods | 2014 Apr | 429-35 | 24531420 |
| Statistical modeling of behavioral dynamics during propofol-induced loss of consciousness. | Wong, Kin Foon Kevin; Smith, Anne C; Pierce, Eric T; Harrell, P Grace; Walsh, John L; Salazar-Gomez, Andres Felipe; Tavares, Casie L; Purdon, Patrick L; Brown, Emery N | Journal of neuroscience methods | 2014 Apr 30 | 65-74 | 24530701 |
| Crystal structure of Cas9 in complex with guide RNA and target DNA. | Nishimasu, Hiroshi; Ran, F Ann; Hsu, Patrick D; Konermann, Silvana; Shehata, Soraya I; Dohmae, Naoshi; Ishitani, Ryuichiro; Zhang, Feng; Nureki, Osamu | Cell | 2014 Feb 27 | 935-49 | 24529477 |
| Structural insights on the role of antibodies in HIV-1 vaccine and therapy. | West Jr, Anthony P; Scharf, Louise; Scheid, Johannes F; Klein, Florian; Bjorkman, Pamela J; Nussenzweig, Michel C | Cell | 2014 Feb 13 | 633-48 | 24529371 |
| Lipid Modulation of Calcium Flux through CaV2.3 Regulates Acrosome Exocytosis and Fertilization. | Cohen, Roy; Buttke, Danielle E; Asano, Atsushi; Mukai, Chinatsu; Nelson, Jacquelyn L; Ren, Dongjun; Miller, Richard J; Cohen-Kutner, Moshe; Atlas, Daphne; Travis, Alexander J | Developmental cell | 2014 Feb 10 | 310-21 | 24525187 |
| Dissecting genomic diversity, one cell at a time. | Blainey, Paul C; Quake, Stephen R | Nature methods | 2014 Jan | 19-21 | 24524132 |
| Photoacoustic thermography of tissue. | Ke, Haixin; Tai, Stephen; Wang, Lihong V | Journal of biomedical optics | 2014 | 26003 | 24522803 |
| Emotion perception, but not affect perception, is impaired with semantic memory loss. | Lindquist, Kristen A; Gendron, Maria; Barrett, Lisa Feldman; Dickerson, Bradford C | Emotion (Washington, D.C.) | 2014 Apr | 375-87 | 24512242 |
| Central role for RNase YbeY in Hfq-dependent and Hfq-independent small-RNA regulation in bacteria. | Pandey, Shree P; Winkler, Jonathan A; Li, Hu; Camacho, Diogo M; Collins, James J; Walker, Graham C | BMC genomics | 2014 | 121 | 24511998 |
| Metabolite Profiling of 5'-AMP-Induced Hypometabolism. | Zhao, Zhaoyang; Van Oort, Anita; Tao, Zhenyin; O'Brien 3rd, William G; Lee, Cheng Chi | Metabolomics : Official journal of the Metabolomic Society | 2014 Feb 1 | 63-76 | 24511307 |
| Visualizing Genomes with Oligopaint FISH Probes. | Beliveau, Brian J; Apostolopoulos, Nicholas; Wu, Chao-Ting | Current protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.] | 2014 | 14.23.1-14.23.20 | 24510436 |
| Neural circuits as computational dynamical systems. | Sussillo, David | Current opinion in neurobiology | 2014 Apr | 156-63 | 24509098 |
| Axonal transport of TDP-43 mRNA granules is impaired by ALS-causing mutations. | Alami, Nael H; Smith, Rebecca B; Carrasco, Monica A; Williams, Luis A; Winborn, Christina S; Han, Steve S W; Kiskinis, Evangelos; Winborn, Brett; Freibaum, Brian D; Kanagaraj, Anderson; Clare, Alison J; Badders, Nisha M; Bilican, Bilada; Chaum, Edward; Chandran, Siddharthan; Shaw, Christopher E; Eggan, Kevin C; Maniatis, Tom; Taylor, J Paul | Neuron. | 2014 Feb 05; | 24507191 | |
| Self-recalibrating classifiers for intracortical brain-computer interfaces. | Bishop, William; Chestek, Cynthia C; Gilja, Vikash; Nuyujukian, Paul; Foster, Justin D; Ryu, Stephen I; Shenoy, Krishna V; Yu, Byron M | Journal of neural engineering | 2014 Apr | 26001 | 24503597 |
| Cultural Relativity in Perceiving Emotion From Vocalizations. | Gendron, Maria; Roberson, Debi; van der Vyver, Jacoba Marieta; Barrett, Lisa Feldman | Psychological science | 2014 Feb 5 | NULL | 24501109 |
| Identification of cinnabarinic acid as a novel endogenous aryl hydrocarbon receptor ligand that drives IL-22 production. | Lowe, Margaret M; Mold, Jeff E; Kanwar, Bittoo; Huang, Yong; Louie, Alexander; Pollastri, Michael P; Wang, Cuihua; Patel, Gautam; Franks, Diana G; Schlezinger, Jennifer; Sherr, David H; Silverstone, Allen E; Hahn, Mark E; McCune, Joseph M | PloS one | 2014 | e87877 | 24498387 |
| Institutions and cooperation in an ecology of games. | Smaldino, Paul E; Lubell, Mark | Artificial life | 2014 | 207-21 | 24494613 |
| Identification of germline transcriptional regulatory elements in Aedes aegypti. | Akbari, Omar S; Papathanos, Philippos A; Sandler, Jeremy E; Kennedy, Katie; Hay, Bruce A | Scientific reports | 2014 | 3954 | 24492376 |
| Discovery of a potent stapled helix peptide that binds to the 70N domain of replication protein A. | Frank, Andreas O; Vangamudi, Bhavatarini; Feldkamp, Michael D; Souza-Fagundes, Elaine M; Luzwick, Jessica W; Cortez, David; Olejniczak, Edward T; Waterson, Alex G; Rossanese, Olivia W; Chazin, Walter J; Fesik, Stephen W | Journal of medicinal chemistry | 2014 Mar 27 | 2455-61 | 24491171 |
| Graphene-based contrast agents for photoacoustic and thermoacoustic tomography. | Lalwani, Gaurav; Cai, Xin; Nie, Liming; Wang, Lihong V; Sitharaman, Balaji | Photoacoustics | 2013 Dec 1 | 62-67 | 24490141 |
| Sodium current reduction unmasks a structure-dependent substrate for arrhythmogenesis in the normal ventricles. | Boyle, Patrick M; Park, Carolyn J; Arevalo, Hermenegild J; Vigmond, Edward J; Trayanova, Natalia A | PloS one. | 2014; | e86947 | 24489810 |
| Deconvolution of serum cortisol levels by using compressed sensing. | Faghih, Rose T; Dahleh, Munther A; Adler, Gail K; Klerman, Elizabeth B; Brown, Emery N | PloS one | 2014 | e85204 | 24489656 |
| A proteomic survey of widespread protein aggregation in yeast. | O'Connell, Jeremy D; Tsechansky, Mark; Royall, Ariel; Boutz, Daniel R; Ellington, Andrew D; Marcotte, Edward M | Molecular bioSystems. | 2014 Apr; | 851-61 | 24488121 |
| Spatially Fourier-encoded photoacoustic microscopy using a digital micromirror device. | Liang, Jinyang; Gao, Liang; Li, Chiye; Wang, Lihong V | Optics letters | 2014 Feb 1 | 430-3 | 24487832 |
| Bacteriophages use an expanded genetic code on evolutionary paths to higher fitness. | Hammerling, Michael J; Ellefson, Jared W; Boutz, Daniel R; Marcotte, Edward M; Ellington, Andrew D; Barrick, Jeffrey E | Nature chemical biology | 2014 Mar | 178-80 | 24487692 |
| Multicontrast photoacoustic in vivo imaging using near-infrared fluorescent proteins. | Krumholz, Arie; Shcherbakova, Daria M; Xia, Jun; Wang, Lihong V; Verkhusha, Vladislav V | Scientific reports | 2014 | 3939 | 24487319 |
| A general framework for estimating the relative pathogenicity of human genetic variants. | Kircher, Martin; Witten, Daniela M; Jain, Preti; O'Roak, Brian J; Cooper, Gregory M; Shendure, Jay | Nature genetics | 2014 Mar | 310-5 | 24487276 |
| Lis1 regulates asymmetric division in hematopoietic stem cells and in leukemia. | Zimdahl, Bryan; Ito, Takahiro; Blevins, Allen; Bajaj, Jeevisha; Konuma, Takaaki; Weeks, Joi; Koechlein, Claire S; Kwon, Hyog Young; Arami, Omead; Rizzieri, David; Broome, H Elizabeth; Chuah, Charles; Oehler, Vivian G; Sasik, Roman; Hardiman, Gary; Reya, T | Nature genetics | 2014 Mar | 245-52 | 24487275 |
| Cortical activity in the null space: permitting preparation without movement. | Kaufman, Matthew T; Churchland, Mark M; Ryu, Stephen I; Shenoy, Krishna V | Nature neuroscience | 2014 Mar | 440-8 | 24487233 |
| Photoimprint photoacoustic microscopy for three-dimensional label-free subdiffraction imaging. | Yao, Junjie; Wang, Lidai; Li, Chiye; Zhang, Chi; Wang, Lihong V | Physical review letters | 2014 Jan 10 | 14302 | 24483902 |
| Spin models inferred from patient-derived viral sequence data faithfully describe HIV fitness landscapes. | Shekhar, Karthik; Ruberman, Claire F; Ferguson, Andrew L; Barton, John P; Kardar, Mehran; Chakraborty, Arup K | Physical review. E, Statistical, nonlinear, and soft matter physics. | 2013 Dec; | 62705 | 24483484 |
| Long term stability of nanowire nanoelectronics in physiological environments. | Zhou, Wei; Dai, Xiaochuan; Fu, Tian-Ming; Xie, Chong; Liu, Jia; Lieber, Charles M | Nano letters | 2014 Mar 12 | 1614-9 | 24479700 |
| Nonlinear light-sheet fluorescence microscopy by photobleaching imprinting. | Gao, Liang; Zhu, Liren; Li, Chiye; Wang, Lihong V | Journal of the Royal Society, Interface / the Royal Society | 2014 Apr 6 | 20130851 | 24478278 |
| Photoacoustic measurement of the Gruneisen parameter of tissue. | Yao, Da-Kang; Zhang, Chi; Maslov, Konstantin; Wang, Lihong V | Journal of biomedical optics | 2014 Jan | 17007 | 24474512 |
| Ultrasonically encoded wavefront shaping for focusing into random media. | Tay, Jian Wei; Lai, Puxiang; Suzuki, Yuta; Wang, Lihong V | Scientific reports | 2014 | 3918 | 24472822 |
| Emerging applications of phase-change materials (PCMs): teaching an old dog new tricks. | Hyun, Dong Choon; Levinson, Nathanael S; Jeong, Unyong; Xia, Younan | Angewandte Chemie (International ed. in English) | 2014 Apr 7 | 3780-95 | 24470287 |
| Ferromagnetic nanoparticles with peroxidase-like activity enhance the cleavage of biological macromolecules for biofilm elimination. | Gao, Lizeng; Giglio, Krista M; Nelson, Jacquelyn L; Sondermann, Holger; Travis, Alexander J | Nanoscale | 2014 Mar 7 | 2588-93 | 24468900 |
| fMRI of retina-originated phosphenes experienced by patients with leber congenital amaurosis. | Ashtari, Manzar; Cyckowski, Laura; Yazdi, Alborz; Viands, Amanda; Marshall, Kathleen; Bokkon, Istvan; Maguire, Albert; Bennett, Jean | PloS one | 2014 | e86068 | 24465873 |
| Cell-penetrating peptide-mediated delivery of TALEN proteins via bioconjugation for genome engineering. | Liu, Jia; Gaj, Thomas; Patterson, James T; Sirk, Shannon J; Barbas 3rd, Carlos F | PloS one | 2014 | e85755 | 24465685 |
| Composition and function of T cell subpopulations are slow to change despite effective antiretroviral treatment of HIV disease. | Emu, Brinda; Moretto, Walter J; Hoh, Rebecca; Krone, Melissa; Martin, Jeffrey N; Nixon, Douglas F; Deeks, Steven G; McCune, Joseph M | PloS one | 2014 | e85613 | 24465619 |
| Focused fluorescence excitation with time-reversed ultrasonically encoded light and imaging in thick scattering media. | Lai, Puxiang; Suzuki, Yuta; Xu, Xiao; Wang, Lihong V | Laser physics letters | 2013 | 75604 | 24465244 |
| A Distributed Platform for Global-Scale Agent-Based Models of Disease Transmission. | Parker, Jon; Epstein, Joshua M | ACM transactions on modeling and computer simulation : a publication of the Association for Computing Machinery | 2011 Dec | 2 | 24465120 |
| Improving CRISPR-Cas nuclease specificity using truncated guide RNAs. | Fu, Yanfang; Sander, Jeffry D; Reyon, Deepak; Cascio, Vincent M; Joung, J Keith | Nature biotechnology | 2014 Jan 26 | NULL | 24463574 |
| Neonatal insulin action impairs hypothalamic neurocircuit formation in response to maternal high-fat feeding. | Vogt, Merly C; Paeger, Lars; Hess, Simon; Steculorum, Sophie M; Awazawa, Motoharu; Hampel, Brigitte; Neupert, Susanne; Nicholls, Hayley T; Mauer, Jan; Hausen, A Christine; Predel, Reinhard; Kloppenburg, Peter; Horvath, Tamas L; Bruning, Jens C | Cell | 2014 Jan 30 | 495-509 | 24462248 |
| Neural Dynamics of Reaching following Incorrect or Absent Motor Preparation. | Ames, K Cora; Ryu, Stephen I; Shenoy, Krishna V | Neuron | 2014 Jan 22 | 438-51 | 24462104 |
| Modeling the dynamical effects of anesthesia on brain circuits. | Ching, Shinung; Brown, Emery N | Current opinion in neurobiology | 2014 Apr | 116-22 | 24457211 |
| Expanding the zinc-finger recombinase repertoire: directed evolution and mutational analysis of serine recombinase specificity determinants. | Sirk, Shannon J; Gaj, Thomas; Jonsson, Andreas; Mercer, Andrew C; Barbas 3rd, Carlos F | Nucleic acids research | 2014 Apr 1 | 4755-66 | 24452803 |
| Chronic Spinal Cord Electrical Stimulation Protects Against 6-hydroxydopamine Lesions. | Yadav, Amol P; Fuentes, Romulo; Zhang, Hao; Vinholo, Thais; Wang, Chi-Han; Freire, Marco Aurelio M; Nicolelis, Miguel A L | Scientific reports | 2014 | 3839 | 24452435 |
| Analysis of maternal microchimerism in rhesus monkeys (Macaca mulatta) using real-time quantitative PCR amplification of MHC polymorphisms. | Bakkour, Sonia; Baker, Chris A R; Tarantal, Alice F; Wen, Li; Busch, Michael P; Lee, Tzong-Hae; McCune, Joseph M | Chimerism | 2014 Jan-Mar | 41805 | 24451553 |
| Diversity of human tRNA genes from the 1000-genomes project. | Parisien, Marc; Wang, Xiaoyun; Pan, Tao | RNA biology | 2013 Dec 1 | 1853-67 | 24448271 |
| Neurite outgrowth on electrospun nanofibers with uniaxial alignment: the effects of fiber density, surface coating, and supporting substrate. | Xie, Jingwei; Liu, Wenying; MacEwan, Matthew R; Bridgman, Paul C; Xia, Younan | ACS nano | 2014 Feb 25 | 1878-85 | 24444076 |
| Fabrication of Cell Patches Using Biodegradable Scaffolds with a Hexagonal Array of Interconnected Pores (SHAIPs). | Zhang, Yu Shrike; Yao, Junjie; Wang, Lihong V; Xia, Younan | Polymer | 2014 Jan 14 | 445-452 | 24443593 |
| A blanket of inhibition: functional inferences from dense inhibitory connectivity. | Karnani, Mahesh M; Agetsuma, Masakazu; Yuste, Rafael | Current opinion in neurobiology. | 2014 Jun; | 96-102 | 24440415 |
| Distinct structural features of TFAM drive mitochondrial DNA packaging versus transcriptional activation. | Ngo, Huu B; Lovely, Geoffrey A; Phillips, Rob; Chan, David C | Nature communications | 2014 | 3077 | 24435062 |
| Comparing protein folding in vitro and in vivo: foldability meets the fitness challenge. | Hingorani, Karan S; Gierasch, Lila M | Current opinion in structural biology | 2014 Jan 13 | 81-90 | 24434632 |
| A transition in brain state during propofol-induced unconsciousness. | Mukamel, Eran A; Pirondini, Elvira; Babadi, Behtash; Wong, Kin Foon Kevin; Pierce, Eric T; Harrell, P Grace; Walsh, John L; Salazar-Gomez, Andres F; Cash, Sydney S; Eskandar, Emad N; Weiner, Veronica S; Brown, Emery N; Purdon, Patrick L | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2014 Jan 15; | 839-45 | 24431442 |
| PIWI proteins and PIWI-interacting RNAs in the soma. | Ross, Robert J; Weiner, Molly M; Lin, Haifan | Nature | 2014 Jan 16 | 353-9 | 24429634 |
| Grafting aptamers onto gold nanostars increases in vitro efficacy in a wide range of cancer cell types. | Dam, Duncan Hieu M; Culver, Kayla S B; Odom, Teri W | Molecular pharmaceutics | 2014 Feb 3 | 580-7 | 24422969 |
| Transcriptome in vivo analysis (TIVA) of spatially defined single cells in live tissue. | Lovatt, Ditte; Ruble, Brittani K; Lee, Jaehee; Dueck, Hannah; Kim, Tae Kyung; Fisher, Stephen; Francis, Chantal; Spaethling, Jennifer M; Wolf, John A; Grady, M Sean; Ulyanova, Alexandra V; Yeldell, Sean B; Griepenburg, Julianne C; Buckley, Peter T; Kim, J | Nature methods | 2014 Feb | 190-6 | 24412976 |
| Noninvasive prenatal diagnosis in a fetus at risk for methylmalonic acidemia. | Gu, Wei; Koh, Winston; Blumenfeld, Yair J; El-Sayed, Yasser Y; Hudgins, Louanne; Hintz, Susan R; Quake, Stephen R | Genetics in medicine : official journal of the American College of Medical Genetics | 2014 Jan 9 | NULL | 24406457 |
| Electrical Stimulation of the Ventral Tegmental Area Induces Reanimation from General Anesthesia. | Solt, Ken; Van Dort, Christa J; Chemali, Jessica J; Taylor, Norman E; Kenny, Jonathan D; Brown, Emery N | Anesthesiology | 2014 Jan 6 | NULL | 24398816 |
| Label-free photoacoustic microscopy of peripheral nerves. | Matthews, Thomas Paul; Zhang, Chi; Yao, Da-Kang; Maslov, Konstantin; Wang, Lihong V | Journal of biomedical optics | 2014 Jan | 16004 | 24395587 |
| Retrospective respiration-gated whole-body photoacoustic computed tomography of mice. | Xia, Jun; Chen, Wanyi; Maslov, Konstantin; Anastasio, Mark A; Wang, Lihong V | Journal of biomedical optics | 2014 Jan | 16003 | 24395586 |
| Higher CD27+CD8+ T cells percentages during suppressive antiretroviral therapy predict greater subsequent CD4+ T cell recovery in treated HIV infection. | Seu, Lillian; Ortiz, Gabriel M; Epling, Lorrie; Sinclair, Elizabeth; Swainson, Louise A; Bajpai, Urmila D; Huang, Yong; Deeks, Steven G; Hunt, Peter W; Martin, Jeffrey N; McCune, Joseph M | PloS one | 2013 | e84091 | 24391889 |
| Using a kinase-inducible bimolecular switch to control enzyme activity in living cells. | Mehta, Sohum; Zhang, Jin | Current protocols in chemical biology | 2013 Oct 1 | 227-37 | 24391085 |
| Intranasal epidermal growth factor treatment rescues neonatal brain injury. | Scafidi, Joseph; Hammond, Timothy R; Scafidi, Susanna; Ritter, Jonathan; Jablonska, Beata; Roncal, Maria; Szigeti-Buck, Klara; Coman, Daniel; Huang, Yuegao; McCarter Jr, Robert J; Hyder, Fahmeed; Horvath, Tamas L; Gallo, Vittorio | Nature | 2014 Feb 13 | 230-4 | 24390343 |
| Flies and humans share a motion estimation strategy that exploits natural scene statistics. | Clark, Damon A; Fitzgerald, James E; Ales, Justin M; Gohl, Daryl M; Silies, Marion A; Norcia, Anthony M; Clandinin, Thomas R | Nature neuroscience | 2014 Feb | 296-303 | 24390225 |
| Is there consistency and specificity of autonomic changes during emotional episodes? Guidance from the Conceptual Act Theory and psychophysiology. | Quigley, Karen S; Barrett, Lisa Feldman | Biological psychology | 2014 Jan 2 | NULL | 24388802 |
| Germline progenitors escape the widespread phenomenon of homolog pairing during Drosophila development. | Joyce, Eric F; Apostolopoulos, Nicholas; Beliveau, Brian J; Wu, C-ting | PLoS genetics | 2013 | e1004013 | 24385920 |
| Comprehensive proteomic profiling of outer membrane vesicles from Campylobacter jejuni. | Jang, Kyoung-Soon; Sweredoski, Michael J; Graham, Robert L J; Hess, Sonja; Clemons Jr, William M | Journal of proteomics | 2014 Feb 26 | 90-8 | 24382552 |
| Advances in modeling ventricular arrhythmias: from mechanisms to the clinic. | Trayanova, Natalia A; Boyle, Patrick M | Wiley interdisciplinary reviews. Systems biology and medicine. | 2014 Mar-Apr; | 209-24 | 24375958 |
| Large-scale mapping of transposable element insertion sites using digital encoding of sample identity. | Gohl, Daryl M; Freifeld, Limor; Silies, Marion; Hwa, Jennifer J; Horowitz, Mark; Clandinin, Thomas R | Genetics | 2014 Mar | 615-23 | 24374352 |
| FuseFISH: robust detection of transcribed gene fusions in single cells. | Semrau, Stefan; Crosetto, Nicola; Bienko, Magda; Boni, Marina; Bernasconi, Paolo; Chiarle, Roberto; van Oudenaarden, Alexander | Cell reports | 2014 Jan 16 | 18-23 | 24373969 |
| High-resolution photoacoustic tomography of resting-state functional connectivity in the mouse brain. | Nasiriavanaki, Mohammadreza; Xia, Jun; Wan, Hanlin; Bauer, Adam Quentin; Culver, Joseph P; Wang, Lihong V | Proceedings of the National Academy of Sciences of the United States of America. | 2014 Jan 07; | 24367107 | |
| Incorporation of flexible objectives and time-linked simulation with flux balance analysis. | Birch, Elsa W; Udell, Madeleine; Covert, Markus W | Journal of theoretical biology | 2014 Mar 21 | 21-Dec | 24361328 |
| Kinesin-1 regulates synaptic strength by mediating the delivery, removal, and redistribution of AMPA receptors. | Hoerndli, Frédéric J; Maxfield, Dane A; Brockie, Penelope J; Mellem, Jerry E; Jensen, Erica; Wang, Rui; Madsen, David M; Maricq, Andres V | Neuron. | 2013 Dec 18; | 24360545 | |
| Interactome maps of mouse gene regulatory domains reveal basic principles of transcriptional regulation. | Kieffer-Kwon, Kyong-Rim; Tang, Zhonghui; Mathe, Ewy; Qian, Jason; Sung, Myong-Hee; Li, Guoliang; Resch, Wolfgang; Baek, Songjoon; Pruett, Nathanael; Grontved, Lars; Vian, Laura; Nelson, Steevenson; Zare, Hossein; Hakim, Ofir; Reyon, Deepak; Yamane, Arito; | Cell | 2013 Dec 19 | 1507-20 | 24360274 |
| Spiking Neural Network Decoder for Brain-Machine Interfaces. | Dethier, Julie; Gilja, Vikash; Nuyujukian, Paul; Elassaad, Shauki A; Shenoy, Krishna V; Boahen, Kwabena | International IEEE/EMBS Conference on Neural Engineering : [proceedings]. International IEEE EMBS Conference on Neural Engineering | 2011 | NULL | 24352611 |
| National and local influenza surveillance through Twitter: an analysis of the 2012-2013 influenza epidemic. | Broniatowski, David A; Paul, Michael J; Dredze, Mark | PloS one | 2013 | e83672 | 24349542 |
| Caveolin-3 regulates compartmentation of cardiomyocyte beta2-adrenergic receptor-mediated cAMP signaling. | Wright, Peter T; Nikolaev, Viacheslav O; O'Hara, Thomas; Diakonov, Ivan; Bhargava, Anamika; Tokar, Sergiy; Schobesberger, Sophie; Shevchuk, Andrew I; Sikkel, Markus B; Wilkinson, Ross; Trayanova, Natalia A; Lyon, Alexander R; Harding, Sian E; Gorelik, Julia | Journal of molecular and cellular cardiology. | 2014 Feb; | 38-48 | 24345421 |
| Virtual 3D heart models to aid pacemaker implantation in children. | Trayanova, Natalia A | Future cardiology. | 2014 Jan; | 8-May | 24344653 |
| Trends in antibiotic resistance in coagulase-negative staphylococci in the United States, 1999 to 2012. | May, Larissa; Klein, Eili Y; Rothman, Richard E; Laxminarayan, Ramanan | Antimicrobial agents and chemotherapy | 2014 Mar | 1404-9 | 24342646 |
| Genome-scale CRISPR-Cas9 knockout screening in human cells. | Shalem, Ophir; Sanjana, Neville E; Hartenian, Ella; Shi, Xi; Scott, David A; Mikkelsen, Tarjei S; Heckl, Dirk; Ebert, Benjamin L; Root, David E; Doench, John G; Zhang, Feng | Science (New York, N.Y.) | 2014 Jan 3 | 84-7 | 24336571 |
| Free-standing kinked nanowire transistor probes for targeted intracellular recording in three dimensions. | Qing, Quan; Jiang, Zhe; Xu, Lin; Gao, Ruixuan; Mai, Liqiang; Lieber, Charles M | Nature nanotechnology | 2013 Dec 15 | NULL | 24336402 |
| Mycobacteria manipulate macrophage recruitment through coordinated use of membrane lipids. | Cambier, C J; Takaki, Kevin K; Larson, Ryan P; Hernandez, Rafael E; Tobin, David M; Urdahl, Kevin B; Cosma, Christine L; Ramakrishnan, Lalita | Nature | 2014 Jan 9 | 218-22 | 24336213 |
| Using well-defined Ag nanocubes as substrates to quantify the spatial resolution and penetration depth of surface-enhanced Raman scattering imaging. | Moran, Christine H; Rycenga, Matthew; Xia, Xiaohu; Cobley, Claire M; Xia, Younan | Nanotechnology | 2014 Jan 10 | 14007 | 24334508 |
| Nasal Microenvironments and Interspecific Interactions Influence Nasal Microbiota Complexity and S.ýýaureus Carriage. | Yan, Miling; Pamp, Sunje J; Fukuyama, Julia; Hwang, Peter H; Cho, Do-Yeon; Holmes, Susan; Relman, David A | Cell host & microbe | 2013 Dec 11 | 631-40 | 24331461 |
| Wide-field two-dimensional multifocal optical-resolution photoacoustic-computed microscopy. | Xia, Jun; Li, Guo; Wang, Lidai; Nasiriavanaki, Mohammadreza; Maslov, Konstantin; Engelbach, John A; Garbow, Joel R; Wang, Lihong V | Optics letters | 2013 Dec 15 | 5236-9 | 24322226 |
| Absolute photoacoustic thermometry in deep tissue. | Yao, Junjie; Ke, Haixin; Tai, Stephen; Zhou, Yong; Wang, Lihong V | Optics letters | 2013 Dec 15 | 5228-31 | 24322224 |
| Photobleaching imprinting microscopy: seeing clearer and deeper. | Gao, Liang; Garcia-Uribe, Alejandro; Liu, Yan; Li, Chiye; Wang, Lihong V | Journal of cell science. | 2014 Jan 15; | 24317295 | |
| Structural basis for enhanced HIV-1 neutralization by a dimeric immunoglobulin G form of the glycan-recognizing antibody 2G12. | Wu, Yunji; West Jr, Anthony P; Kim, Helen J; Thornton, Matthew E; Ward, Andrew B; Bjorkman, Pamela J | Cell reports | 2013 Dec 12 | 1443-55 | 24316082 |
| Adipose Tissue Macrophages: Amicus adipem? | Odegaard, Justin I; Ganeshan, Kirthana; Chawla, Ajay | Cell metabolism | 2013 Dec 3 | 767-8 | 24315364 |
| Males shorten the life span of C. elegans hermaphrodites via secreted compounds. | Maures, Travis J; Booth, Lauren N; Benayoun, Berenice A; Izrayelit, Yevgeniy; Schroeder, Frank C; Brunet, Anne | Science (New York, N.Y.) | 2014 Jan 31 | 541-4 | 24292626 |
| Ultrasonically encoded photoacoustic flowgraphy in biological tissue. | Wang, Lidai; Xia, Jun; Yao, Junjie; Maslov, Konstantin I; Wang, Lihong V | Physical review letters | 2013 Nov 15 | 204301 | 24289689 |
| Improving limited-view photoacoustic tomography with an acoustic reflector. | Huang, Bin; Xia, Jun; Maslov, Konstantin; Wang, Lihong V | Journal of biomedical optics | 2013 | 110505 | 24285421 |
| Simulating the evolution of the human family: cooperative breeding increases in harsh environments. | Smaldino, Paul E; Newson, Lesley; Schank, Jeffrey C; Richerson, Peter J | PloS one | 2013 | e80753 | 24278318 |
| Cooperation in Harsh Environments and the Emergence of Spatial Patterns. | Smaldino, Paul E | Chaos, solitons, and fractals | 2013 Nov | NULL | 24277977 |
| Optical sectioning by wide-field photobleaching imprinting microscopy. | Li, Chiye; Gao, Liang; Liu, Yan; Wang, Lihong V | Applied physics letters. | 2013 Oct 28; | 183703 | 24273331 |
| High-resolution mapping reveals a conserved, widespread, dynamic mRNA methylation program in yeast meiosis. | Schwartz, Schraga; Agarwala, Sudeep D; Mumbach, Maxwell R; Jovanovic, Marko; Mertins, Philipp; Shishkin, Alexander; Tabach, Yuval; Mikkelsen, Tarjei S; Satija, Rahul; Ruvkun, Gary; Carr, Steven A; Lander, Eric S; Fink, Gerald R; Regev, Aviv | Cell | 2013 Dec 5 | 1409-21 | 24269006 |
| Temporal response of the human virome to immunosuppression and antiviral therapy. | De Vlaminck, Iwijn; Khush, Kiran K; Strehl, Calvin; Kohli, Bitika; Luikart, Helen; Neff, Norma F; Okamoto, Jennifer; Snyder, Thomas M; Cornfield, David N; Nicolls, Mark R; Weill, David; Bernstein, Daniel; Valantine, Hannah A; Quake, Stephen R | Cell | 2013 Nov 21 | 1178-87 | 24267896 |
| Statistical approach to protein quantification. | Gerster, Sarah; Kwon, Taejoon; Ludwig, Christina; Matondo, Mariette; Vogel, Christine; Marcotte, Edward M; Aebersold, Ruedi; Buhlmann, Peter | Molecular & cellular proteomics : MCP | 2014 Feb | 666-77 | 24255132 |
| Regulation of Endogenous Human Gene Expression by Ligand-Inducible TALE Transcription Factors. | Mercer, Andrew C; Gaj, Thomas; Sirk, Shannon J; Lamb, Brian M; Barbas 3rd, Carlos F | ACS synthetic biology | 2013 Nov 22 | NULL | 24251925 |
| CD4 CTL: Living up to the challenge. | Cheroutre, Hilde; Husain, Mohammad Mushtaq | Seminars in immunology | 2013 Nov 15 | 273-81 | 24246226 |
| Delicate Balance between Functionally Required Flexibility and Aggregation Risk in a *-Rich Protein. | Ferrolino, Mylene C; Zhuravleva, Anastasia; Budyak, Ivan L; Krishnan, Beena; Gierasch, Lila M | Biochemistry | 2013 Nov 25 | NULL | 24236614 |
| DNA sequence-dependent mechanics and protein-assisted bending in repressor-mediated loop formation. | Boedicker, James Q; Garcia, Hernan G; Johnson, Stephanie; Phillips, Rob | Physical biology | 2013 Dec | 66005 | 24231252 |
| PhosphoNetworks: a database for human phosphorylation networks. | Hu, Jianfei; Rho, Hee-Sool; Newman, Robert H; Zhang, Jin; Zhu, Heng; Qian, Jiang | Bioinformatics (Oxford, England) | 2014 Jan 1 | 141-2 | 24227675 |
| Themis sets the signal threshold for positive and negative selection in T-cell development. | Fu, Guo; Casas, Javier; Rigaud, Stephanie; Rybakin, Vasily; Lambolez, Florence; Brzostek, Joanna; Hoerter, John A H; Paster, Wolfgang; Acuto, Oreste; Cheroutre, Hilde; Sauer, Karsten; Gascoigne, Nicholas R J | Nature | 2013 Dec 19 | 441-5 | 24226767 |
| The histone demethylase LSD1/KDM1A promotes the DNA damage response. | Mosammaparast, Nima; Kim, Haeyoung; Laurent, Benoit; Zhao, Yu; Lim, Hui Jun; Majid, Mona C; Dango, Sebastian; Luo, Yuying; Hempel, Kristina; Sowa, Mathew E; Gygi, Steven P; Steen, Hanno; Harper, J Wade; Yankner, Bruce; Shi, Yang | The Journal of cell biology | 2013 Nov 11 | 457-70 | 24217620 |
| DataHigh: graphical user interface for visualizing and interacting with high-dimensional neural activity. | Cowley, Benjamin R; Kaufman, Matthew T; Butler, Zachary S; Churchland, Mark M; Ryu, Stephen I; Shenoy, Krishna V; Yu, Byron M | Journal of neural engineering | 2013 Dec | 66012 | 24216250 |
| Feedback control of gene expression variability in the Caenorhabditis elegans Wnt pathway. | Ji, Ni; Middelkoop, Teije C; Mentink, Remco A; Betist, Marco C; Tonegawa, Satto; Mooijman, Dylan; Korswagen, Hendrik C; van Oudenaarden, Alexander | Cell | 2013 Nov 7 | 869-80 | 24209624 |
| Likelihood methods for point processes with refractoriness. | Citi, Luca; Ba, Demba; Brown, Emery N; Barbieri, Riccardo | Neural computation | 2014 Feb | 237-63 | 24206384 |
| A brain-machine interface for control of medically-induced coma. | Shanechi, Maryam M; Chemali, Jessica J; Liberman, Max; Solt, Ken; Brown, Emery N | PLoS computational biology | 2013 Oct | e1003284 | 24204231 |
| Context-dependent computation by recurrent dynamics in prefrontal cortex. | Mante, Valerio; Sussillo, David; Shenoy, Krishna V; Newsome, William T | Nature | 2013 Nov 7 | 78-84 | 24201281 |
| Increased robustness of single-molecule counting with microfluidics, digital isothermal amplification, and a mobile phone versus real-time kinetic measurements. | Selck, David A; Karymov, Mikhail A; Sun, Bing; Ismagilov, Rustem F | Analytical chemistry | 2013 Nov 19 | 11129-36 | 24199852 |
| Imaging neuronal populations in behaving rodents: paradigms for studying neural circuits underlying behavior in the mammalian cortex. | Chen, Jerry L; Andermann, Mark L; Keck, Tara; Xu, Ning-Long; Ziv, Yaniv | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2013 Nov 6 | 17631-40 | 24198355 |
| A brain-machine interface enables bimanual arm movements in monkeys. | Ifft, Peter J; Shokur, Solaiman; Li, Zheng; Lebedev, Mikhail A; Nicolelis, Miguel A L | Science translational medicine | 2013 Nov 6 | 210ra154 | 24197735 |
| Ultrasound-heated photoacoustic flowmetry. | Wang, Lidai; Yao, Junjie; Maslov, Konstantin I; Xing, Wenxin; Wang, Lihong V | Journal of biomedical optics | 2013 | 117003 | 24194064 |
| Time-reversed ultrasonically encoded optical focusing using two ultrasonic transducers for improved ultrasonic axial resolution. | Yang, Qiang; Xu, Xiao; Lai, Puxiang; Xu, Daxiong; Wang, Lihong V | Journal of biomedical optics | 2013 | 110502 | 24194060 |
| Serotonergic neuron regulation informed by in vivo single-cell transcriptomics. | Spaethling, Jennifer M; Piel, David; Dueck, Hannah; Buckley, Peter T; Morris, Jacqueline F; Fisher, Stephen A; Lee, Jaehee; Sul, Jai-Yoon; Kim, Junhyong; Bartfai, Tamas; Beck, Sheryl G; Eberwine, James H | FASEB journal : official publication of the Federation of American Societies for Experimental Biology | 2014 Feb | 771-80 | 24192459 |
| Cytoplasmic intron retention, function, splicing, and the sentinel RNA hypothesis. | Buckley, Peter T; Khaladkar, Mugdha; Kim, Junhyong; Eberwine, James | Wiley interdisciplinary reviews. RNA. | 2014 Mar-Apr; | 223-30 | 24190870 |
| Silver nanocube on gold microplate as a well-defined and highly active substrate for SERS detection. | Xia, Xiaohu; Rycenga, Matthew; Qin, Dong; Xia, Younan | Journal of materials chemistry. C, Materials for optical and electronic devices | 2013 Oct 14 | NULL | 24187611 |
| Physical principles for scalable neural recording. | Marblestone, Adam H; Zamft, Bradley M; Maguire, Yael G; Shapiro, Mikhail G; Cybulski, Thaddeus R; Glaser, Joshua I; Amodei, Dario; Stranges, P Benjamin; Kalhor, Reza; Dalrymple, David A; Seo, Dongjin; Alon, Elad; Maharbiz, Michel M; Carmena, Jose M; Rabaey, Jan M; Boyden, Edward S; Church, George M; Kording, Konrad P | Frontiers in computational neuroscience. | 2013; | 24187539 | |
| Accelerated discovery via a whole-cell model. | Sanghvi, Jayodita C; Regot, Sergi; Carrasco, Silvia; Karr, Jonathan R; Gutschow, Miriam V; Bolival Jr, Benjamin; Covert, Markus W | Nature methods | 2013 Dec | 1192-5 | 24185838 |
| PIWI proteins are essential for early Drosophila embryogenesis. | Mani, Sneha Ramesh; Megosh, Heather; Lin, Haifan | Developmental biology | 2013 Oct 31 | NULL | 24184635 |
| PIWI proteins are essential for early Drosophila embryogenesis. | Mani, Sneha Ramesh; Megosh, Heather; Lin, Haifan | Developmental biology | 2014 Jan 15 | 340-9 | 24184635 |
| Engineering approaches to illuminating brain structure and dynamics. | Deisseroth, Karl; Schnitzer, Mark J | Neuron. | 2013 Oct 30; | 24183010 | |
| Aggregate-prone R120GCRYAB triggers multifaceted modifications of the thioredoxin system. | Banerjee Mustafi, Soumyajit; Grose, Julianne H; Zhang, Huali; Pratt, Gregory W; Sadoshima, Junichi; Christians, Elisabeth S; Benjamin, Ivor J | Antioxidants & redox signaling | 2014 Jun 20 | 2891-906 | 24180415 |
| General method for regulating protein stability with light. | Bonger, Kimberly M; Rakhit, Rishi; Payumo, Alexander Y; Chen, James K; Wandless, Thomas J | ACS chemical biology. | 2014 Jan 17; | 24180414 | |
| Chromatin immunoprecipitation assay of Piwi in Drosophila. | Yin, Hang; Lin, Haifan | Methods in molecular biology (Clifton, N.J.) | 2014 | 41650 | 24178552 |
| Highly expressed loci are vulnerable to misleading ChIP localization of multiple unrelated proteins. | Teytelman, Leonid; Thurtle, Deborah M; Rine, Jasper; van Oudenaarden, Alexander | Proceedings of the National Academy of Sciences of the United States of America | 2013 Nov 12 | 18602-7 | 24173036 |
| Microbiome assembly across multiple body sites in low-birthweight infants. | Costello, Elizabeth K; Carlisle, Erica M; Bik, Elisabeth M; Morowitz, Michael J; Relman, David A | mBio | 2013 | e00782-13 | 24169577 |
| A cytochrome P450 serves as an unexpected terpene cyclase during fungal meroterpenoid biosynthesis. | Chooi, Yit-Heng; Hong, Young J; Cacho, Ralph A; Tantillo, Dean J; Tang, Yi | Journal of the American Chemical Society | 2013 Nov 13 | 16805-8 | 24161266 |
| Semiconductor-based DNA sequencing of histone modification states. | Cheng, Christine S; Rai, Kunal; Garber, Manuel; Hollinger, Andrew; Robbins, Dana; Anderson, Scott; Macbeth, Alyssa; Tzou, Austin; Carneiro, Mauricio O; Raychowdhury, Raktima; Russ, Carsten; Hacohen, Nir; Gershenwald, Jeffrey E; Lennon, Niall; Nusbaum, Cha | Nature communications | 2013 | 2672 | 24157732 |
| Genome engineering using the CRISPR-Cas9 system. | Ran, F Ann; Hsu, Patrick D; Wright, Jason; Agarwala, Vineeta; Scott, David A; Zhang, Feng | Nature protocols | 2013 Nov | 2281-308 | 24157548 |
| Discovery of a potent inhibitor of replication protein a protein-protein interactions using a fragment-linking approach. | Frank, Andreas O; Feldkamp, Michael D; Kennedy, J Phillip; Waterson, Alex G; Pelz, Nicholas F; Patrone, James D; Vangamudi, Bhavatarini; Camper, DeMarco V; Rossanese, Olivia W; Chazin, Walter J; Fesik, Stephen W | Journal of medicinal chemistry | 2013 Nov 27 | 9242-50 | 24147804 |
| Poly(dA:dT)-rich DNAs are highly flexible in the context of DNA looping. | Johnson, Stephanie; Chen, Yi-Ju; Phillips, Rob | PloS one | 2013 | e75799 | 24146776 |
| Adhesion and fusion efficiencies of human immunodeficiency virus type 1 (HIV-1) surface proteins. | Dobrowsky, Terrence M; Rabi, S Alireza; Nedellec, Rebecca; Daniels, Brian R; Mullins, James I; Mosier, Donald E; Siliciano, Robert F; Wirtz, Denis | Scientific reports. | 2013 Oct 22; | 24145278 | |
| Antigen-specific B-cell receptor sensitizes B cells to infection by influenza virus. | Dougan, Stephanie K; Ashour, Joseph; Karssemeijer, Roos A; Popp, Maximilian W; Avalos, Ana M; Barisa, Marta; Altenburg, Arwen F; Ingram, Jessica R; Cragnolini, Juan Jose; Guo, Chunguang; Alt, Frederick W; Jaenisch, Rudolf; Ploegh, Hidde L | Nature | 2013 Nov 21 | 406-9 | 24141948 |
| The challenge of connecting the dots in the B.R.A.I.N. | Devor, Anna; Bandettini, Peter A; Boas, David A; Bower, James M; Buxton, Richard B; Cohen, Lawrence B; Dale, Anders M; Einevoll, Gaute T; Fox, Peter T; Franceschini, Maria Angela; Friston, Karl J; Fujimoto, James G; Geyer, Mark A; Greenberg, Joel H; Halgren, Eric; Hamalainen, Matti S; Helmchen, Fritjof; Hyman, Bradley T; Jasanoff, Alan; Jernigan, Terry L; Judd, Lewis L; Kim, Seong-Gi; Kleinfeld, David; Kopell, Nancy J; Kutas, Marta; Kwong, Kenneth K; Larkum, Matthew E; Lo, Eng H; Magistretti, Pierre J; Mandeville, Joseph B; Masliah, Eliezer; Mitra, Partha P; Mobley, William C; Moskowitz, Michael A; Nimmerjahn, Axel; Reynolds, John H; Rosen, Bruce R; Salzberg, Brian M; Schaffer, Chris B; Silva, Gabriel A; So, Peter T C; Spitzer, Nicholas C; Tootell, Roger B; Van Essen, David C; Vanduffel, Wim; Vinogradov, Sergei A; Wald, Lawrence L; Wang, Lihong V; Weber, Bruno; Yodh, Arjun G | Neuron. | 2013 Oct 16; | 270-4 | 24139032 |
| Correction: Distal Effect of Amino Acid Substitutions in CYP2C9 Polymorphic Variants Causes Differences in Interatomic Interactions against (S)-Warfarin. | Lertkiatmongkol, Panida; Assawamakin, Anunchai; White, George; Chopra, Gaurav; Rongnoparut, Pornpimol; Samudrala, Ram; Tongsima, Sissades | PloS one | 2013 | NULL | 24137505 |
| Three-dimensional mapping of microcircuit correlation structure. | Cotton, R James; Froudarakis, Emmanouil; Storer, Patrick; Saggau, Peter; Tolias, Andreas S | Frontiers in neural circuits | 2013 | 151 | 24133414 |
| Atrophy in distinct corticolimbic networks in frontotemporal dementia relates to social impairments measured using the Social Impairment Rating Scale. | Bickart, Kevin C; Brickhouse, Michael; Negreira, Alyson; Sapolsky, Daisy; Barrett, Lisa Feldman; Dickerson, Bradford C | Journal of neurology, neurosurgery, and psychiatry | 2014 Apr | 438-48 | 24133285 |
| SHANK3 and IGF1 restore synaptic deficits in neurons from 22q13 deletion syndrome patients. | Shcheglovitov, Aleksandr; Shcheglovitova, Olesya; Yazawa, Masayuki; Portmann, Thomas; Shu, Rui; Sebastiano, Vittorio; Krawisz, Anna; Froehlich, Wendy; Bernstein, Jonathan A; Hallmayer, Joachim F; Dolmetsch, Ricardo E | Nature | 2013 Nov 14 | 267-71 | 24132240 |
| Non-Invasive and In Situ Characterization of the Degradation of Biomaterial Scaffolds by Volumetric Photoacoustic Microscopy. | Zhang, Yu Shrike; Cai, Xin; Yao, Junjie; Xing, Wenxin; Wang, Lihong V; Xia, Younan | Angewandte Chemie (International ed. in English) | 2013 Oct 15 | NULL | 24130155 |
| Cross-reactive immune responses as primary drivers of malaria chronicity. | Klein, Eili Y; Graham, Andrea L; Llinas, Manuel; Levin, Simon | Infection and immunity | 2014 Jan | 140-51 | 24126530 |
| Rapid, stable, chemoselective labeling of thiols with Julia-Kocienski-like reagents: a serum-stable alternative to maleimide-based protein conjugation. | Toda, Narihiro; Asano, Shigehiro; Barbas 3rd, Carlos F | Angewandte Chemie (International ed. in English) | 2013 Nov 25 | 12592-6 | 24123851 |
| AMPA receptor antagonist NBQX attenuates later-life epileptic seizures and autistic-like social deficits following neonatal seizures. | Lippman-Bell, Jocelyn J; Rakhade, Sanjay N; Klein, Peter M; Obeid, Makram; Jackson, Michele C; Joseph, Annelise; Jensen, Frances E | Epilepsia | 2013 Nov | 1922-32 | 24117347 |
| The fumagillin gene cluster, an example of hundreds of genes under veA control in Aspergillus fumigatus. | Dhingra, Sourabh; Lind, Abigail L; Lin, Hsiao-Ching; Tang, Yi; Rokas, Antonis; Calvo, Ana M | PloS one | 2013 | e77147 | 24116213 |
| Real-time segmentation and tracking of brain metabolic state in ICU EEG recordings of burst suppression. | Westover, M Brandon; Ching, ShiNung; Shafi, Mouhsin M; Cash, Sydney S; Brown, Emery N | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2013 | 7108-11 | 24111383 |
| Reference-free harmonic regression technique to remove EEG-fMRI ballistocardiogram artifacts. | Krishnaswamy, Pavitra; Bonmassar, Giorgio; Purdon, Patrick L; Brown, Emery N | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference | 2013 | 5426-9 | 24110963 |
| Investigating the role of firing-rate normalization and dimensionality reduction in brain-machine interface robustness. | Kao, Jonathan C; Nuyujukian, Paul; Stavisky, Sergey; Ryu, Stephen I; Ganguli, Surya; Shenoy, Krishna V | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference | 2013 | 293-8 | 24109682 |
| Small-animal whole-body photoacoustic tomography: a review. | Xia, Jun; Wang, Lihong | IEEE transactions on bio-medical engineering | 2013 Sep 25 | NULL | 24108456 |
| Targeted DNA demethylation and activation of endogenous genes using programmable TALE-TET1 fusion proteins. | Maeder, Morgan L; Angstman, James F; Richardson, Marcy E; Linder, Samantha J; Cascio, Vincent M; Tsai, Shengdar Q; Ho, Quan H; Sander, Jeffry D; Reyon, Deepak; Bernstein, Bradley E; Costello, Joseph F; Wilkinson, Miles F; Joung, J Keith | Nature biotechnology | 2013 Dec | 1137-42 | 24108092 |
| Visualization of synaptic inhibition with an optogenetic sensor developed by cell-free protein engineering automation. | Grimley, Joshua S; Li, Li; Wang, Weina; Wen, Lei; Beese, Lorena S; Hellinga, Homme W; Augustine, George J | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2013 Oct 9 | 16297-309 | 24107961 |
| Inconvenient truths in the pursuit of scientific knowledge and public health. | Relman, David A | The Journal of infectious diseases | 2014 Jan 15 | 170-2 | 24106297 |
| Enhancement of photoacoustic tomography by ultrasonic computed tomography based on optical excitation of elements of a full-ring transducer array. | Xia, Jun; Huang, Chao; Maslov, Konstantin; Anastasio, Mark A; Wang, Lihong V | Optics letters | 2013 Aug 15 | 3140-3 | 24104670 |
| All-optical osteotomy to create windows for transcranial imaging in mice. | Jeong, Diana C; Tsai, Philbert S; Kleinfeld, David | Optics express. | 2013 Oct 7; | 23160-8 | 24104230 |
| Imaging energy status in live cells with a fluorescent biosensor of the intracellular ATP-to-ADP ratio. | Tantama, Mathew; Martinez-Francois, Juan Ramon; Mongeon, Rebecca; Yellen, Gary | Nature communications | 2013 | 2550 | 24096541 |
| Photoacoustic recovery after photothermal bleaching in living cells. | Li, Chiye; Zhang, Chi; Gao, Liang; Garcia-Uribe, Alejandro; Wang, Lihong V | Journal of biomedical optics | 2013 | 106004 | 24089253 |
| Gene Expression Profiling of a Hypoxic Seizure Model of Epilepsy Suggests a Role for mTOR and Wnt Signaling in Epileptogenesis. | Theilhaber, Joachim; Rakhade, Sanjay N; Sudhalter, Judy; Kothari, Nayantara; Klein, Peter; Pollard, Jack; Jensen, Frances E | PloS one | 2013 | e74428 | 24086344 |
| Higher 5-hydroxymethylcytosine identifies immortal DNA strand chromosomes in asymmetrically self-renewing distributed stem cells. | Huh, Yang Hoon; Cohen, Justin; Sherley, James L | Proceedings of the National Academy of Sciences of the United States of America | 2013 Oct 15 | 16862-7 | 24082118 |
| Identification of discrete functional subregions of the human periaqueductal gray. | Satpute, Ajay B; Wager, Tor D; Cohen-Adad, Julien; Bianciardi, Marta; Choi, Ji-Kyung; Buhle, Jason T; Wald, Lawrence L; Barrett, Lisa Feldman | Proceedings of the National Academy of Sciences of the United States of America | 2013 Oct 15 | 17101-6 | 24082116 |
| Calibration-free in vivo transverse blood flowmetry based on cross correlation of slow time profiles from photoacoustic microscopy. | Zhou, Yong; Liang, Jinyang; Maslov, Konstantin I; Wang, Lihong V | Optics letters | 2013 Oct 1 | 3882-5 | 24081077 |
| The impact of heterogeneous transmission on the establishment and spread of antimalarial drug resistance. | Klein, Eili Y | Journal of theoretical biology | 2014 Jan 7 | 177-85 | 24076451 |
| Dendritic Glutamate Receptor mRNAs Show Contingent Local Hotspot-Dependent Translational Dynamics. | Kim, Tae Kyung; Sul, Jai-Yoon; Helmfors, Henrik; Langel, Ulo; Kim, Junhyong; Eberwine, James | Cell reports | 2013 Oct 17 | 114-25 | 24075992 |
| Maternal and offspring pools of osteocalcin influence brain development and functions. | Oury, Franck; Khrimian, Lori; Denny, Christine A; Gardin, Antoine; Chamouni, Alexandre; Goeden, Nick; Huang, Yung-yu; Lee, Hojoon; Srinivas, Prashanth; Gao, Xiao-Bing; Suyama, Shigetomo; Langer, Thomas; Mann, John J; Horvath, Tamas L; Bonnin, Alexandre; Karsenty, Gerard | Cell. | 2013 Sep 26; | 228-41 | 24074871 |
| Mitochondrial dynamics controlled by mitofusins regulate Agrp neuronal activity and diet-induced obesity. | Dietrich, Marcelo O; Liu, Zhong-Wu; Horvath, Tamas L | Cell. | 2013 Sep 26; | 188-99 | 24074868 |
| Mitofusin 2 in POMC Neurons Connects ER Stress with Leptin Resistance and Energy Imbalance. | Schneeberger, Marc; Dietrich, Marcelo O; Sebastian, David; Imbernon, Monica; Castano, Carlos; Garcia, Ainhoa; Esteban, Yaiza; Gonzalez-Franquesa, Alba; Rodriguez, Ignacio Castrillon; Bortolozzi, Analia; Garcia-Roves, Pablo M; Gomis, Ramon; Nogueiras, Rube | Cell | 2013 Sep 26 | 172-87 | 24074867 |
| Nanoelectronics-biology frontier: From nanoscopic probes for action potential recording in live cells to three-dimensional cyborg tissues. | Duan, Xiaojie; Fu, Tian-Ming; Liu, Jia; Lieber, Charles M | Nano today | 2013 Aug 1 | 351-373 | 24073014 |
| AMP deaminase 3 deficiency enhanced 5'-AMP induction of hypometabolism. | Daniels, Isadora Susan; O Brien 3rd, William G; Nath, Vinay; Zhao, Zhaoyang; Lee, Cheng Chi | PloS one | 2013 | e75418 | 24066180 |
| Structured-illumination photoacoustic Doppler flowmetry of axial flow in homogeneous scattering media. | Zhang, Ruiying; Yao, Junjie; Maslov, Konstantin I; Wang, Lihong V | Applied physics letters. | 2013 Aug 26; | 94101 | 24065864 |
| Blood spotlight on leukocytes and obesity. | Carvalheira, Jose Barreto Campello; Qiu, Yifu; Chawla, Ajay | Blood | 2013 Nov 7 | 3263-7 | 24065242 |
| Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota. | Kashyap, Purna C; Marcobal, Angela; Ursell, Luke K; Smits, Samuel A; Sonnenburg, Erica D; Costello, Elizabeth K; Higginbottom, Steven K; Domino, Steven E; Holmes, Susan P; Relman, David A; Knight, Rob; Gordon, Jeffrey I; Sonnenburg, Justin L | Proceedings of the National Academy of Sciences of the United States of America | 2013 Oct 15 | 17059-64 | 24062455 |
| Chemical analog-to-digital signal conversion based on robust threshold chemistry and its evaluation in the context of microfluidics-based quantitative assays. | Huynh, Toan; Sun, Bing; Li, Liang; Nichols, Kevin P; Koyner, Jay L; Ismagilov, Rustem F | Journal of the American Chemical Society | 2013 Oct 2 | 14775-83 | 24060606 |
| Live-cell imaging of cytosolic NADH-NAD+ redox state using a genetically encoded fluorescent biosensor. | Hung, Yin Pun; Yellen, Gary | Methods in molecular biology (Clifton, N.J.). | 2014; | 83-95 | 24052382 |
| p53 regulates Period2 expression and the circadian clock. | Miki, Takao; Matsumoto, Tomoko; Zhao, Zhaoyang; Lee, Cheng Chi | Nature communications | 2013 | 2444 | 24051492 |
| Disruption of CEP290 microtubule/membrane-binding domains causes retinal degeneration. | Drivas, Theodore G; Holzbaur, Erika L F; Bennett, Jean | The Journal of clinical investigation. | 2013 Oct; | 4525-39 | 24051377 |
| Developmental Expression of N-Methyl-D-Aspartate (NMDA) Receptor Subunits in Human White and Gray Matter: Potential Mechanism of Increased Vulnerability in the Immature Brain. | Jantzie, Lauren L; Talos, Delia M; Jackson, Michele C; Park, Hyun-Kyung; Graham, Dionne A; Lechpammer, Mirna; Folkerth, Rebecca D; Volpe, Joseph J; Jensen, Frances E | Cerebral cortex (New York, N.Y. : 1991) | 2013 Sep 17 | NULL | 24046081 |
| Sensorimotor structure of Drosophila larva phototaxis. | Kane, Elizabeth A; Gershow, Marc; Afonso, Bruno; Larderet, Ivan; Klein, Mason; Carter, Ashley R; de Bivort, Benjamin L; Sprecher, Simon G; Samuel, Aravinthan D T | Proceedings of the National Academy of Sciences of the United States of America. | 2013 Oct 01; | 24043822 | |
| Type 2 innate lymphoid cells control eosinophil homeostasis. | Nussbaum, Jesse C; Van Dyken, Steven J; von Moltke, Jakob; Cheng, Laurence E; Mohapatra, Alexander; Molofsky, Ari B; Thornton, Emily E; Krummel, Matthew F; Chawla, Ajay; Liang, Hong-Erh; Locksley, Richard M | Nature | 2013 Oct 10 | 245-248 | 24037376 |
| Dampening of expression oscillations by synchronous regulation of a microRNA and its target. | Kim, Dong Hyun; Grun, Dominic; van Oudenaarden, Alexander | Nature genetics | 2013 Sep 15 | NULL | 24036951 |
| 25th anniversary article: galvanic replacement: a simple and versatile route to hollow nanostructures with tunable and well-controlled properties. | Xia, Xiaohu; Wang, Yi; Ruditskiy, Aleksey; Xia, Younan | Advanced materials (Deerfield Beach, Fla.) | 2013 Nov 26 | 6313-33 | 24027074 |
| Noise-equivalent sensitivity of photoacoustics. | Winkler, Amy M; Maslov, Konstantin; Wang, Lihong V | Journal of biomedical optics | 2013 Sep | 97003 | 24026425 |
| Ghrelin-immunopositive hypothalamic neurons tie the circadian clock and visual system to the lateral hypothalamic arousal center. | Horvath, Tamas L; Abizaid, Alfonso; Dietrich, Marcelo O; Li, Ying; Takahashi, Joseph S; Bass, Joseph | Molecular metabolism. | 2012; | 24024121 | |
| Distal effect of amino acid substitutions in CYP2C9 polymorphic variants causes differences in interatomic interactions against (S)-warfarin. | Lertkiatmongkol, Panida; Assawamakin, Anunchai; White, George; Chopra, Gaurav; Rongnoparut, Pornpimol; Samudrala, Ram; Tongsima, Sissades | PloS one. | 2013; | 24023924 | |
| Burst suppression probability algorithms: state-space methods for tracking EEG burst suppression. | Chemali, Jessica; Ching, ShiNung; Purdon, Patrick L; Solt, Ken; Brown, Emery N | Journal of neural engineering | 2013 Oct | 56017 | 24018288 |
| Locus-specific editing of histone modifications at endogenous enhancers. | Mendenhall, Eric M; Williamson, Kaylyn E; Reyon, Deepak; Zou, James Y; Ram, Oren; Joung, J Keith; Bernstein, Bradley E | Nature biotechnology | 2013 Dec | 1133-6 | 24013198 |
| Immunology of AAV-Mediated Gene Transfer in the Eye. | Willett, Keirnan; Bennett, Jean | Frontiers in immunology. | 2013; | 24009613 | |
| Cross-correlation-based transverse flow measurements using optical resolution photoacoustic microscopy with a digital micromirror device. | Liang, Jinyang; Zhou, Yong; Maslov, Konstantin I; Wang, Lihong V | Journal of biomedical optics | 2013 Sep | 96004 | 24002191 |
| Nanoparticle SERS substrates with 3D Raman-active volumes. | Stoerzinger, Kelsey A; Lin, Julia Y; Odom, Teri W | Chemical science (Royal Society of Chemistry : 2010) | 2011 Aug 1 | 1435-1439 | 23997929 |
| ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation. | Lin, John Y; Knutsen, Per Magne; Muller, Arnaud; Kleinfeld, David; Tsien, Roger Y | Nature neuroscience | 2013 Oct | 1499-508 | 23995068 |
| Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity. | Ran, F Ann; Hsu, Patrick D; Lin, Chie-Yu; Gootenberg, Jonathan S; Konermann, Silvana; Trevino, Alexandro E; Scott, David A; Inoue, Azusa; Matoba, Shogo; Zhang, Yi; Zhang, Feng | Cell | 2013 Sep 12 | 1380-9 | 23992846 |
| Synaptic state matching: a dynamical architecture for predictive internal representation and feature detection. | Tavazoie, Saeed | PloS one | 2013 | e72865 | 23991161 |
| Production of unnaturally linked chimeric proteins using a combination of sortase-catalyzed transpeptidation and click chemistry. | Witte, Martin D; Theile, Christopher S; Wu, Tongfei; Guimaraes, Carla P; Blom, Annet E M; Ploegh, Hidde L | Nature protocols. | 2013 Sep; | 1808-19 | 23989675 |
| Adaptive translation as a mechanism of stress response and adaptation. | Pan, Tao | Annual review of genetics | 2013 | 121-37 | 23988117 |
| Expanding the scope of site-specific recombinases for genetic and metabolic engineering. | Gaj, Thomas; Sirk, Shannon J; Barbas 3rd, Carlos F | Biotechnology and bioengineering | 2014 Jan | 41654 | 23982993 |
| Expanding the primate body schema in sensorimotor cortex by virtual touches of an avatar. | Shokur, Solaiman; O'Doherty, Joseph E; Winans, Jesse A; Bleuler, Hannes; Lebedev, Mikhail A; Nicolelis, Miguel A L | Proceedings of the National Academy of Sciences of the United States of America | 2013 Sep 10 | 15121-6 | 23980141 |
| Directed evolution of the TALE N-terminal domain for recognition of all 5' bases. | Lamb, Brian M; Mercer, Andrew C; Barbas 3rd, Carlos F | Nucleic acids research | 2013 Nov | 9779-85 | 23980031 |
| Targeted deletion and inversion of tandemly arrayed genes in Arabidopsis thaliana using zinc finger nucleases. | Qi, Yiping; Li, Xiaohong; Zhang, Yong; Starker, Colby G; Baltes, Nicholas J; Zhang, Feng; Sander, Jeffry D; Reyon, Deepak; Joung, J Keith; Voytas, Daniel F | G3 (Bethesda, Md.) | 2013 Oct | 1707-15 | 23979943 |
| Complexity generation in fungal polyketide biosynthesis: a spirocycle-forming P450 in the concise pathway to the antifungal drug griseofulvin. | Cacho, Ralph A; Chooi, Yit-Heng; Zhou, Hui; Tang, Yi | ACS chemical biology | 2013 Oct 18 | 2322-30 | 23978092 |
| Optical-resolution photoacoustic microscopy: auscultation of biological systems at the cellular level. | Hu, Song; Wang, Lihong V | Biophysical journal | 2013 Aug 20 | 841-7 | 23972836 |
| Circadian gene Bmal1 regulates diurnal oscillations of Ly6C(hi) inflammatory monocytes. | Nguyen, Khoa D; Fentress, Sarah J; Qiu, Yifu; Yun, Karen; Cox, Jeffery S; Chawla, Ajay | Science (New York, N.Y.) | 2013 Sep 27 | 1483-8 | 23970558 |
| Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein. | Feldkamp, Michael D; Frank, Andreas O; Kennedy, J Phillip; Patrone, James D; Vangamudi, Bhavatarini; Waterson, Alex G; Fesik, Stephen W; Chazin, Walter J | Biochemistry | 2013 Sep 17 | 6515-24 | 23962067 |
| Microscale polymer bottles corked with a phase-change material for temperature-controlled release. | Hyun, Dong Choon; Lu, Ping; Choi, Sang-Il; Jeong, Unyong; Xia, Younan | Angewandte Chemie (International ed. in English) | 2013 Sep 27 | 10468-71 | 23959631 |
| Neuroscience thinks big (and collaboratively). | Kandel, Eric R; Markram, Henry; Matthews, Paul M; Yuste, Rafael; Koch, Christof | Nature reviews. Neuroscience. | 2013 Sep; | 659-64 | 23958663 |
| Salmonella require the fatty acid regulator PPARýý for the establishment of a metabolic environment essential for long-term persistence. | Eisele, Nicholas A; Ruby, Thomas; Jacobson, Amanda; Manzanillo, Paolo S; Cox, Jeffery S; Lam, Lilian; Mukundan, Lata; Chawla, Ajay; Monack, Denise M | Cell host & microbe | 2013 Aug 14 | 171-82 | 23954156 |
| Nanoelectronics Meets Biology: From New Nanoscale Devices for Live-Cell Recording to 3D Innervated Tissues. | Duan, Xiaojie; Lieber, Charles M | Chemistry, an Asian journal | 2013 Oct | 2304-14 | 23946279 |
| In silico abstraction of zinc finger nuclease cleavage profiles reveals an expanded landscape of off-target sites. | Sander, Jeffry D; Ramirez, Cherie L; Linder, Samantha J; Pattanayak, Vikram; Shoresh, Noam; Ku, Manching; Foden, Jennifer A; Reyon, Deepak; Bernstein, Bradley E; Liu, David R; Joung, J Keith | Nucleic acids research | 2013 Oct | e181 | 23945932 |
| Phospholipase B is activated in response to sterol removal and stimulates acrosome exocytosis in murine sperm. | Asano, Atsushi; Nelson-Harrington, Jacquelyn L; Travis, Alexander J | The Journal of biological chemistry | 2013 Sep 27 | 28104-15 | 23943622 |
| Optical clearing-aided photoacoustic microscopy with enhanced resolution and imaging depth. | Zhou, Yong; Yao, Junjie; Wang, Lihong V | Optics letters | 2013 Jul 15 | 2592-5 | 23939121 |
| Stochastic cytokine expression induces mixed T helper cell States. | Fang, Miaoqing; Xie, Huangming; Dougan, Stephanie K; Ploegh, Hidde; van Oudenaarden, Alexander | PLoS biology | 2013 Jul | e1001618 | 23935453 |
| Allele-specific detection of single mRNA molecules in situ. | Hansen, Clinton H; van Oudenaarden, Alexander | Nature methods | 2013 Aug 11 | NULL | 23934076 |
| Efficient preloading of the ventricles by a properly timed atrial contraction underlies stroke work improvement in the acute response to cardiac resynchronization therapy. | Hu, Yuxuan; Gurev, Viatcheslav; Constantino, Jason; Trayanova, Natalia | Heart rhythm : the official journal of the Heart Rhythm Society. | 2013 Dec; | 1800-6 | 23928177 |
| RNA Replicon Delivery via Lipid-Complexed PRINT Protein Particles. | Xu, Jing; Luft, J Christopher; Yi, Xianwen; Tian, Shaomin; Owens, Gary; Wang, Jin; Johnson, Ashley; Berglund, Peter; Smith, Jonathan; Napier, Mary E; Desimone, Joseph M | Molecular pharmaceutics | 2013 Aug 21 | NULL | 23924216 |
| Conceptualizing and experiencing compassion. | Condon, Paul; Feldman Barrett, Lisa | Emotion (Washington, D.C.) | 2013 Oct | 817-21 | 23914766 |
| Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A. | Patrone, James D; Kennedy, J Phillip; Frank, Andreas O; Feldkamp, Michael D; Vangamudi, Bhavatarini; Pelz, Nicholas F; Rossanese, Olivia W; Waterson, Alex G; Chazin, Walter J; Fesik, Stephen W | ACS medicinal chemistry letters | 2013 Jul 11 | 601-605 | 23914285 |
| Spinal projection neurons control turning behaviors in zebrafish. | Huang, Kuo-Hua; Ahrens, Misha B; Dunn, Timothy W; Engert, Florian | Current biology : CB | 2013 Aug 19 | 1566-73 | 23910662 |
| Epilepsy biomarkers. | Engel Jr, Jerome; Pitkanen, Asla; Loeb, Jeffrey A; Dudek, F Edward; Bertram 3rd, Edward H; Cole, Andrew J; Moshe, Solomon L; Wiebe, Samuel; Jensen, Frances E; Mody, Istvan; Nehlig, Astrid; Vezzani, Annamaria | Epilepsia | 2013 Aug | 61-9 | 23909854 |
| Issues related to symptomatic and disease-modifying treatments affecting cognitive and neuropsychiatric comorbidities of epilepsy. | Brooks-Kayal, Amy R; Bath, Kevin G; Berg, Anne T; Galanopoulou, Aristea S; Holmes, Gregory L; Jensen, Frances E; Kanner, Andres M; O'Brien, Terence J; Whittemore, Vicky H; Winawer, Melodie R; Patel, Manisha; Scharfman, Helen E | Epilepsia | 2013 Aug | 44-60 | 23909853 |
| Issues related to development of antiepileptogenic therapies. | Pitkanen, Asla; Nehlig, Astrid; Brooks-Kayal, Amy R; Dudek, F Edward; Friedman, Daniel; Galanopoulou, Aristea S; Jensen, Frances E; Kaminski, Rafal M; Kapur, Jaideep; Klitgaard, Henrik; Loscher, Wolfgang; Mody, Istvan; Schmidt, Dieter | Epilepsia | 2013 Aug | 35-43 | 23909852 |
| Expression of Isl1 during mouse development. | Zhuang, Shaowei; Zhang, Qingquan; Zhuang, Tao; Evans, Sylvia M; Liang, Xingqun; Sun, Yunfu | Gene expression patterns : GEP | 2013 Jul 29 | 407-412 | 23906961 |
| Microbiota's 'little helpers': bacteriophages and antibiotic-associated responses in the gut microbiome. | Sun, Christine L; Relman, David A | Genome biology. | 2013; | 127 | 23906048 |
| Nanometre-scale thermometry in a living cell. | Kucsko, G; Maurer, P C; Yao, N Y; Kubo, M; Noh, H J; Lo, P K; Park, H; Lukin, M D | Nature | 2013 Aug 1 | 54-8 | 23903748 |
| Calibration-free quantification of absolute oxygen saturation based on the dynamics of photoacoustic signals. | Xia, Jun; Danielli, Amos; Liu, Yan; Wang, Lidai; Maslov, Konstantin; Wang, Lihong V | Optics letters | 2013 Aug 1 | 2800-3 | 23903146 |
| Random-access optical-resolution photoacoustic microscopy using a digital micromirror device. | Liang, Jinyang; Zhou, Yong; Winkler, Amy W; Wang, Lidai; Maslov, Konstantin I; Li, Chiye; Wang, Lihong V | Optics letters | 2013 Aug 1 | 2683-6 | 23903111 |
| Rapidly-dissolvable microneedle patches via a highly scalable and reproducible soft lithography approach. | Moga, Katherine A; Bickford, Lissett R; Geil, Robert D; Dunn, Stuart S; Pandya, Ashish A; Wang, Yapei; Fain, John H; Archuleta, Christine F; O'Neill, Adrian T; Desimone, Joseph M | Advanced materials (Deerfield Beach, Fla.) | 2013 Sep 25 | 5060-6 | 23893866 |
| CRISPR RNA-guided activation of endogenous human genes. | Maeder, Morgan L; Linder, Samantha J; Cascio, Vincent M; Fu, Yanfang; Ho, Quan H; Joung, J Keith | Nature methods | 2013 Oct | 977-9 | 23892898 |
| Real-time segmentation of burst suppression patterns in critical care EEG monitoring. | Brandon Westover, M; Shafi, Mouhsin M; Ching, Shinung; Chemali, Jessica J; Purdon, Patrick L; Cash, Sydney S; Brown, Emery N | Journal of neuroscience methods | 2013 Sep 30 | 131-41 | 23891828 |
| Local cortical dynamics of burst suppression in the anaesthetized brain. | Lewis, Laura D; Ching, Shinung; Weiner, Veronica S; Peterfreund, Robert A; Eskandar, Emad N; Cash, Sydney S; Brown, Emery N; Purdon, Patrick L | Brain : a journal of neurology | 2013 Sep | 2727-37 | 23887187 |
| Deep-tissue photoacoustic tomography of Forster resonance energy transfer. | Wang, Yu; Xia, Jun; Wang, Lihong V | Journal of biomedical optics | 2013 | 101316 | 23884608 |
| Optical control of mammalian endogenous transcription and epigenetic states. | Konermann, Silvana; Brigham, Mark D; Trevino, Alexandro E; Hsu, Patrick D; Heidenreich, Matthias; Cong, Le; Platt, Randall J; Scott, David A; Church, George M; Zhang, Feng | Nature | 2013 Aug 22 | 472-6 | 23877069 |
| Heritable and precise zebrafish genome editing using a CRISPR-Cas system. | Hwang, Woong Y; Fu, Yanfang; Reyon, Deepak; Maeder, Morgan L; Kaini, Prakriti; Sander, Jeffry D; Joung, J Keith; Peterson, Randall T; Yeh, Jing-Ruey Joanna | PloS one | 2013 | e68708 | 23874735 |
| An enzyme that inactivates the inflammatory mediator leukotriene b4 restricts mycobacterial infection. | Tobin, David M; Roca, Francisco J; Ray, John P; Ko, Dennis C; Ramakrishnan, Lalita | PloS one | 2013 | e67828 | 23874453 |
| DNA targeting specificity of RNA-guided Cas9 nucleases. | Hsu, Patrick D; Scott, David A; Weinstein, Joshua A; Ran, F Ann; Konermann, Silvana; Agarwala, Vineeta; Li, Yinqing; Fine, Eli J; Wu, Xuebing; Shalem, Ophir; Cradick, Thomas J; Marraffini, Luciano A; Bao, Gang; Zhang, Feng | Nature biotechnology | 2013 Sep | 827-32 | 23873081 |
| Coordination of heart and lung co-development by a multipotent cardiopulmonary progenitor. | Peng, Tien; Tian, Ying; Boogerd, Cornelis J; Lu, Min Min; Kadzik, Rachel S; Stewart, Kathleen M; Evans, Sylvia M; Morrisey, Edward E | Nature | 2013 Aug 29 | 589-92 | 23873040 |
| Structure prediction of partial-length protein sequences. | Laurenzi, Adrian; Hung, Ling-Hong; Samudrala, Ram | International journal of molecular sciences | 2013 | 14892-907 | 23867606 |
| Heparan sulfate proteoglycans containing a glypican 5 core and 2-O-sulfo-iduronic acid function as Sonic Hedgehog co-receptors to promote proliferation. | Witt, Rochelle M; Hecht, Marie-Lyn; Pazyra-Murphy, Maria F; Cohen, Samuel M; Noti, Christian; van Kuppevelt, Toin H; Fuller, Maria; Chan, Jennifer A; Hopwood, John J; Seeberger, Peter H; Segal, Rosalind A | The Journal of biological chemistry | 2013 Sep 6 | 26275-88 | 23867465 |
| A coaxial optrode as multifunction write-read probe for optogenetic studies in non-human primates. | Ozden, Ilker; Wang, Jing; Lu, Yao; May, Travis; Lee, Joonhee; Goo, Werapong; O'Shea, Daniel J; Kalanithi, Paul; Diester, Ilka; Diagne, Mohamed; Deisseroth, Karl; Shenoy, Krishna V; Nurmikko, Arto V | Journal of neuroscience methods | 2013 Sep 30 | 142-54 | 23867081 |
| RNA interference knockdown of DNA methyl-transferase 3 affects gene alternative splicing in the honey bee. | Li-Byarlay, Hongmei; Li, Yang; Stroud, Hume; Feng, Suhua; Newman, Thomas C; Kaneda, Megan; Hou, Kirk K; Worley, Kim C; Elsik, Christine G; Wickline, Samuel A; Jacobsen, Steven E; Ma, Jian; Robinson, Gene E | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jul 30 | 12750-5 | 23852726 |
| A neurodegeneration-specific gene-expression signature of acutely isolated microglia from an amyotrophic lateral sclerosis mouse model. | Chiu, Isaac M; Morimoto, Emiko T A; Goodarzi, Hani; Liao, Jennifer T; O'Keeffe, Sean; Phatnani, Hemali P; Muratet, Michael; Carroll, Michael C; Levy, Shawn; Tavazoie, Saeed; Myers, Richard M; Maniatis, Tom | Cell reports | 2013 Jul 25 | 385-401 | 23850290 |
| Modular use of peripheral input channels tunes motion-detecting circuitry. | Silies, Marion; Gohl, Daryl M; Fisher, Yvette E; Freifeld, Limor; Clark, Damon A; Clandinin, Thomas R | Neuron | 2013 Jul 10 | 111-27 | 23849199 |
| TB: the Yin and Yang of lipid mediators. | Tobin, David M; Ramakrishnan, Lalita | Current opinion in pharmacology | 2013 Aug | 641-5 | 23849093 |
| Dysbiosis of the gut microbiota is associated with hiv disease progression and tryptophan catabolism. | Vujkovic-Cvijin, Ivan; Dunham, Richard M; Iwai, Shoko; Maher, Michael C; Albright, Rebecca G; Broadhurst, Mara J; Hernandez, Ryan D; Lederman, Michael M; Huang, Yong; Somsouk, Ma; Deeks, Steven G; Hunt, Peter W; Lynch, Susan V; McCune, Joseph M | Science translational medicine | 2013 Jul 10 | 193ra91 | 23843452 |
| Instantaneous three-dimensional sensing using spatial light modulator illumination with extended depth of field imaging. | Quirin, Sean; Peterka, Darcy S; Yuste, Rafael | Optics express. | 2013 Jul 1; | 16007-21 | 23842387 |
| Correction: Evolutionary principles of modular gene regulation in yeasts. | Thompson, Dawn A; Roy, Sushmita; Chan, Michelle; Styczynski, Mark P; Pfiffner, Jenna; French, Courtney; Socha, Amanda; Thielke, Anne; Napolitano, Sara; Muller, Paul; Kellis, Manolis; Konieczka, Jay H; Wapinski, Ilan; Regev, Aviv | eLife. | 2013; | e01114 | 23840936 |
| Expanding the structural diversity of polyketides by exploring the cofactor tolerance of an inline methyltransferase domain. | Winter, Jaclyn M; Chiou, Grace; Bothwell, Ian R; Xu, Wei; Garg, Neil K; Luo, Minkui; Tang, Yi | Organic letters | 2013 Jul 19 | 3774-7 | 23837609 |
| SNP ascertainment bias in population genetic analyses: why it is important, and how to correct it. | Lachance, Joseph; Tishkoff, Sarah A | BioEssays : news and reviews in molecular, cellular and developmental biology | 2013 Sep | 780-6 | 23836388 |
| The developmental transcriptome of the mosquito Aedes aegypti, an invasive species and major arbovirus vector. | Akbari, Omar S; Antoshechkin, Igor; Amrhein, Henry; Williams, Brian; Diloreto, Race; Sandler, Jeremy; Hay, Bruce A | G3 (Bethesda, Md.) | 2013 Sep | 1493-509 | 23833213 |
| R-loops and nicks initiate DNA breakage and genome instability in non-growing Escherichia coli. | Wimberly, Hallie; Shee, Chandan; Thornton, P C; Sivaramakrishnan, Priya; Rosenberg, Susan M; Hastings, P J | Nature communications | 2013 Jul 5 | 2115 | 23828459 |
| Intracellular temperature mapping with fluorescence-assisted photoacoustic-thermometry. | Gao, Liang; Zhang, Chi; Li, Chiye; Wang, Lihong V | Applied physics letters. | 2013 May 13; | 193705 | 23825801 |
| Thalamocortical mechanisms for the anteriorization of alpha rhythms during propofol-induced unconsciousness. | Vijayan, Sujith; Ching, Shinung; Purdon, Patrick L; Brown, Emery N; Kopell, Nancy J | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2013 Jul 3 | 11070-5 | 23825412 |
| Great ape genetic diversity and population history. | Prado-Martinez, Javier; Sudmant, Peter H; Kidd, Jeffrey M; Li, Heng; Kelley, Joanna L; Lorente-Galdos, Belen; Veeramah, Krishna R; Woerner, August E; O'Connor, Timothy D; Santpere, Gabriel; Cagan, Alexander; Theunert, Christoph; Casals, Ferran; Laayouni, | Nature | 2013 Jul 3 | NULL | 23823723 |
| Engineering customized TALE nucleases (TALENs) and TALE transcription factors by fast ligation-based automatable solid-phase high-throughput (FLASH) assembly. | Reyon, Deepak; Maeder, Morgan L; Khayter, Cyd; Tsai, Shengdar Q; Foley, Jonathan E; Sander, Jeffry D; Joung, J Keith | Current protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.] | 2013 Jul | Unit 12.16 | 23821439 |
| The aging brain and anesthesia. | Brown, Emery N; Purdon, Patrick L | Current opinion in anaesthesiology | 2013 Aug | 414-9 | 23820102 |
| The NADPH metabolic network regulates human ýýB-crystallin cardiomyopathy and reductive stress in Drosophila melanogaster. | Xie, Heng B; Cammarato, Anthony; Rajasekaran, Namakkal S; Zhang, Huali; Suggs, Jennifer A; Lin, Ho-Chen; Bernstein, Sanford I; Benjamin, Ivor J; Golic, Kent G | PLoS genetics | 2013 Jun | e1003544 | 23818860 |
| The Role of Aromatic-Aromatic Interactions in Strand-Strand Stabilization of ýý-Sheets. | Budyak, Ivan L; Zhuravleva, Anastasia; Gierasch, Lila M | Journal of molecular biology | 2013 Sep 23 | 3522-35 | 23810905 |
| Homeostatic regulation of dendritic dynamics in a motor map in vivo. | Kishore, Sandeep; Fetcho, Joseph R | Nature communications | 2013 Jun 27 | 2086 | 23803587 |
| The microRNA regulation of stem cells. | Huang, Xiao Albert; Lin, Haifan | Wiley interdisciplinary reviews. Developmental biology | 2012 Jan-Feb | 83-95 | 23801669 |
| Modeling Spatial Correlation of DNA Deformation: DNA Allostery in Protein Binding. | Xu, Xinliang; Ge, Hao; Gu, Chan; Gao, Yi Qin; Wang, Siyuan S; Thio, Beng Joo Reginald; Hynes, James T; Xie, X Sunney; Cao, Jianshu | The journal of physical chemistry. B | 2013 Jul 8 | NULL | 23795567 |
| High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells. | Fu, Yanfang; Foden, Jennifer A; Khayter, Cyd; Maeder, Morgan L; Reyon, Deepak; Joung, J Keith; Sander, Jeffry D | Nature biotechnology | 2013 Jun 23 | NULL | 23792628 |
| GABAergic lateral interactions tune the early stages of visual processing in Drosophila. | Freifeld, Limor; Clark, Damon A; Schnitzer, Mark J; Horowitz, Mark A; Clandinin, Thomas R | Neuron | 2013 Jun 19 | 1075-89 | 23791198 |
| A bacterial export system for generating extracellular amyloid aggregates. | Sivanathan, Viknesh; Hochschild, Ann | Nature protocols | 2013 Jul | 1381-90 | 23787895 |
| Generating Better Medicines for Cancer. | Dunn, Stuart S; Byrne, James D; Perry, Jillian L; Chen, Kai; Desimone, Joseph M | ACS macro letters | 2013 Apr 24 | 393-397 | 23772351 |
| Visual predictions in the orbitofrontal cortex rely on associative content. | Chaumon, Maximilien; Kveraga, Kestutis; Barrett, Lisa Feldman; Bar, Moshe | Cerebral cortex (New York, N.Y. : 1991). | 2014 Nov; | 2899-907 | 23771980 |
| Real-time Closed-loop Control in a Rodent Model of Medically Induced Coma Using Burst Suppression. | Ching, Shinung; Liberman, Max Y; Chemali, Jessica J; Westover, M Brandon; Kenny, Jonathan; Solt, Ken; Purdon, Patrick L; Brown, Emery N | Anesthesiology | 2013 Jun 13 | NULL | 23770601 |
| Choroid-plexus-derived Otx2 homeoprotein constrains adult cortical plasticity. | Spatazza, Julien; Lee, Henry H C; Di Nardo, Ariel A; Tibaldi, Lorenzo; Joliot, Alain; Hensch, Takao K; Prochiantz, Alain | Cell reports | 2013 Jun 27 | 1815-23 | 23770240 |
| Specific kinematics and motor-related neurons for aversive chemotaxis in Drosophila. | Gao, Xiaojing J; Potter, Christopher J; Gohl, Daryl M; Silies, Marion; Katsov, Alexander Y; Clandinin, Thomas R; Luo, Liqun | Current biology : CB | 2013 Jul 8 | 1163-72 | 23770185 |
| Microbial persistence and the road to drug resistance. | Cohen, Nadia R; Lobritz, Michael A; Collins, James J | Cell host & microbe | 2013 Jun 12 | 632-42 | 23768488 |
| Photoacoustic Microscopy in Tissue Engineering. | Cai, Xin; Zhang, Yu Shrike; Xia, Younan; Wang, Lihong V | Materials today (Kidlington, England) | 2013 Mar 1 | 67-77 | 23766667 |
| Two-photon calcium imaging during fictive navigation in virtual environments. | Ahrens, Misha B; Huang, Kuo Hua; Narayan, Sujatha; Mensh, Brett D; Engert, Florian | Frontiers in neural circuits. | 2013; | 23761738 | |
| Discovery of Cryptic Polyketide Metabolites from Dermatophytes Using Heterologous Expression in Aspergillus nidulans. | Yin, Wen-Bing; Chooi, Yit Heng; Smith, Adam R; Cacho, Ralph A; Hu, Youcai; White, Theodore C; Tang, Yi | ACS synthetic biology | 2013 Jun 11 | 23758576 | |
| Computational analysis of anti-HIV-1 antibody neutralization panel data to identify potential functional epitope residues. | West Jr, Anthony P; Scharf, Louise; Horwitz, Joshua; Klein, Florian; Nussenzweig, Michel C; Bjorkman, Pamela J | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jun 10 | 23754383 | |
| The cortical angiome: an interconnected vascular network with noncolumnar patterns of blood flow. | Blinder, Pablo; Tsai, Philbert S; Kaufhold, John P; Knutsen, Per M; Suhl, Harry; Kleinfeld, David | Nature neuroscience | 2013 Jul | 889-97 | 23749145 |
| Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome. | Modi, Sheetal R; Lee, Henry H; Spina, Catherine S; Collins, James J | Nature | 2013 Jun 9 | NULL | 23748443 |
| A closed-loop anesthetic delivery system for real-time control of burst suppression. | Liberman, Max Y; Ching, Shinung; Chemali, Jessica; Brown, Emery N | Journal of neural engineering | 2013 Aug | 46004 | 23744607 |
| HCN4 dynamically marks the first heart field and conduction system precursors. | Liang, Xingqun; Wang, Gang; Lin, Lizhu; Lowe, Jennifer; Zhang, Qingquan; Bu, Lei; Chen, Yihan; Chen, Ju; Sun, Yunfu; Evans, Sylvia M | Circulation research | 2013 Aug 2 | 399-407 | 23743334 |
| Cortical control of arm movements: a dynamical systems perspective. | Shenoy, Krishna V; Sahani, Maneesh; Churchland, Mark M | Annual review of neuroscience | 2013 Jul 8 | 337-59 | 23725001 |
| piggyBac transposase tools for genome engineering. | Li, Xianghong; Burnight, Erin R; Cooney, Ashley L; Malani, Nirav; Brady, Troy; Sander, Jeffry D; Staber, Janice; Wheelan, Sarah J; Joung, J Keith; McCray Jr, Paul B; Bushman, Frederic D; Sinn, Patrick L; Craig, Nancy L | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jun 18 | E2279-87 | 23723351 |
| Mapping and cracking sensorimotor circuits in genetic model organisms. | Clark, Damon A; Freifeld, Limor; Clandinin, Thomas R | Neuron | 2013 May 22 | 583-95 | 23719159 |
| Eosinophils secrete IL-4 to facilitate liver regeneration. | Goh, Y P Sharon; Henderson, Neil C; Heredia, Jose E; Red Eagle, Alex; Odegaard, Justin I; Lehwald, Nadja; Nguyen, Khoa D; Sheppard, Dean; Mukundan, Lata; Locksley, Richard M; Chawla, Ajay | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jun 11 | 9914-9 | 23716700 |
| A Reactive Oxygen Species (ROS)-Responsive Polymer for Safe, Efficient, and Targeted Gene Delivery in Cancer Cells. | Shim, Min Suk; Xia, Younan | Angewandte Chemie (International ed. in English) | 2013 Jul 1 | 6926-9 | 23716349 |
| Untangling the web: the diverse functions of the PIWI/piRNA pathway. | Mani, Sneha Ramesh; Juliano, Celina E | Molecular reproduction and development | 2013 Aug | 632-64 | 23712694 |
| The roles of monkey M1 neuron classes in movement preparation and execution. | Kaufman, Matthew T; Churchland, Mark M; Shenoy, Krishna V | Journal of neurophysiology | 2013 Aug | 817-25 | 23699057 |
| Connection between Oligomeric State and Gating Characteristics of Mechanosensitive Ion Channels. | Haselwandter, Christoph A; Phillips, Rob | PLoS computational biology | 2013 May | e1003055 | 23696720 |
| Slow-sound photoacoustic microscopy. | Zhang, Chi; Zhou, Yong; Li, Chiye; Wang, Lihong V | Applied physics letters. | 2013 Apr 22; | 163702 | 23696693 |
| Perfusion Imaging of Focal Cortical Dysplasia Using Arterial Spin Labeling: Correlation With Histopathological Vascular Density. | Wintermark, Pia; Lechpammer, Mirna; Warfield, Simon K; Kosaras, Bela; Takeoka, Masanori; Poduri, Annapurna; Madsen, Joseph R; Bergin, Ann M; Whalen, Stephen; Jensen, Frances E | Journal of child neurology | 2013 Nov | 1474-1482 | 23696629 |
| Evolutionary dynamics and information hierarchies in biological systems. | Walker, Sara Imari; Callahan, Benjamin J; Arya, Gaurav; Barry, J David; Bhattacharya, Tanmoy; Grigoryev, Sergei; Pellegrini, Matteo; Rippe, Karsten; Rosenberg, Susan M | Annals of the New York Academy of Sciences | 2013 May 20 | 23691975 | |
| Functional diversity among sensory receptors in a Drosophila olfactory circuit. | Mathew, Dennis; Martelli, Carlotta; Kelley-Swift, Elizabeth; Brusalis, Christopher; Gershow, Marc; Samuel, Aravinthan D T; Emonet, Thierry; Carlson, John R | Proceedings of the National Academy of Sciences of the United States of America. | 2013 Jun 04; | 23690583 | |
| Fragment-based drug discovery using NMR spectroscopy. | Harner, Mary J; Frank, Andreas O; Fesik, Stephen W | Journal of biomolecular NMR | 2013 May 18 | 23686385 | |
| Comparative analysis of RNA sequencing methods for degraded or low-input samples. | Adiconis, Xian; Borges-Rivera, Diego; Satija, Rahul; Deluca, David S; Busby, Michele A; Berlin, Aaron M; Sivachenko, Andrey; Thompson, Dawn Anne; Wysoker, Alec; Fennell, Timothy; Gnirke, Andreas; Pochet, Nathalie; Regev, Aviv; Levin, Joshua Z | Nature methods | 2013 May 19 | 23685885 | |
| Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells. | Shalek, Alex K; Satija, Rahul; Adiconis, Xian; Gertner, Rona S; Gaublomme, Jellert T; Raychowdhury, Raktima; Schwartz, Schraga; Yosef, Nir; Malboeuf, Christine; Lu, Diana; Trombetta, John J; Gennert, Dave; Gnirke, Andreas; Goren, Alon; Hacohen, Nir; Levin | Nature | 2013 Jun 13 | 236-40 | 23685454 |
| An unsolved mystery: The target-recognizing RNA species of microRNA genes. | Chen, Chang-Zheng | Biochimie | 2013 May 14 | 23685275 | |
| Evaluation of the pathogenesis and treatment of Mycobacterium marinum infection in zebrafish. | Takaki, Kevin; Davis, J Muse; Winglee, Kathryn; Ramakrishnan, Lalita | Nature protocols. | 2013 Jun; | 1114-24 | 23680983 |
| Neural control of sexually dimorphic behaviors. | Manoli, Devanand S; Fan, Pu; Fraser, Eleanor J; Shah, Nirao M | Current opinion in neurobiology | 2013 Jun | 330-8 | 23680385 |
| Surpassing fundamental limits of oscillators using nonlinear resonators. | Villanueva, L G; Kenig, E; Karabalin, R B; Matheny, M H; Lifshitz, Ron; Cross, M C; Roukes, M L | Physical review letters | 2013 Apr 26 | 177208 | 23679770 |
| Activity-dependent gene expression in honey bee mushroom bodies in response to orientation flight. | Lutz, Claudia C; Robinson, Gene E | The Journal of experimental biology | 2013 Jun 1 | 2031-8 | 23678099 |
| Future of the particle replication in nonwetting templates (PRINT) technology. | Xu, Jing; Wong, Dominica H C; Byrne, James D; Chen, Kai; Bowerman, Charles; DeSimone, Joseph M | Angewandte Chemie (International ed. in English) | 2013 Jun 24 | 6580-9 | 23670869 |
| Progress in gene therapy for neurological disorders. | Simonato, Michele; Bennett, Jean; Boulis, Nicholas M; Castro, Maria G; Fink, David J; Goins, William F; Gray, Steven J; Lowenstein, Pedro R; Vandenberghe, Luk H; Wilson, Thomas J; Wolfe, John H; Glorioso, Joseph C | Nature reviews. Neurology | 2013 Jun | 298 | 23670108 |
| ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering. | Gaj, Thomas; Gersbach, Charles A; Barbas 3rd, Carlos F | Trends in biotechnology | 2013 Jul | 397-405 | 23664777 |
| ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering. | Gaj, Thomas; Gersbach, Charles A; Barbas 3rd, Carlos F | Trends in biotechnology | 2013 May 8 | 23664777 | |
| Sexually dimorphic neurons in the ventromedial hypothalamus govern mating in both sexes and aggression in males. | Yang, Cindy F; Chiang, Michael C; Gray, Daniel C; Prabhakaran, Mahalakshmi; Alvarado, Maricruz; Juntti, Scott A; Unger, Elizabeth K; Wells, James A; Shah, Nirao M | Cell | 2013 May 9 | 896-909 | 23663785 |
| Short pathways to complexity generation: fungal peptidyl alkaloid multicyclic scaffolds from anthranilate building blocks. | Walsh, Christopher T; Haynes, Stuart W; Ames, Brian D; Gao, Xue; Tang, Yi | ACS chemical biology. | 2013 Jul 19; | 1366-82 | 23659680 |
| IL-7 production in murine lymphatic endothelial cells and induction in the setting of peripheral lymphopenia. | Miller, Corey N; Hartigan-O'Connor, Dennis J; Lee, Myeong Sup; Laidlaw, Grace; Cornelissen, Ivo P; Matloubian, Mehrdad; Coughlin, Shaun R; McDonald, Donald M; McCune, Joseph M | International immunology | 2013 Aug | 471-83 | 23657000 |
| Novel synthetic medea selfish genetic elements drive population replacement in Drosophila; a theoretical exploration of medea-dependent population suppression. | Akbari, Omar S; Chen, Chun-Hong; Marshall, John M; Huang, Haixia; Antoshechkin, Igor; Hay, Bruce A | ACS synthetic biology. | 2014 Dec 19; | 915-28 | 23654248 |
| One-step generation of mice carrying mutations in multiple genes by CRISPR/Cas-mediated genome engineering. | Wang, Haoyi; Yang, Hui; Shivalila, Chikdu S; Dawlaty, Meelad M; Cheng, Albert W; Zhang, Feng; Jaenisch, Rudolf | Cell | 2013 May 9 | 910-8 | 23643243 |
| Arboretum: reconstruction and analysis of the evolutionary history of condition-specific transcriptional modules. | Roy, Sushmita; Wapinski, Ilan; Pfiffner, Jenna; French, Courtney; Socha, Amanda; Konieczka, Jay; Habib, Naomi; Kellis, Manolis; Thompson, Dawn; Regev, Aviv | Genome research. | 2013 Jun; | 1039-50 | 23640720 |
| Physiology: Inflammation links ageing to the brain. | Gabuzda, Dana; Yankner, Bruce A | Nature | 2013 May 9 | 197-8 | 23636321 |
| Biomimicry enhances sequential reactions of tethered glycolytic enzymes, TPI and GAPDHS. | Mukai, Chinatsu; Gao, Lizeng; Bergkvist, Magnus; Nelson, Jacquelyn L; Hinchman, Meleana M; Travis, Alexander J | PloS one | 2013 | e61434 | 23626684 |
| Macrophage biology in development, homeostasis and disease. | Wynn, Thomas A; Chawla, Ajay; Pollard, Jeffrey W | Nature | 2013 Apr 25 | 445-55 | 23619691 |
| Progress in gene therapy for neurological disorders. | Simonato, Michele; Bennett, Jean; Boulis, Nicholas M; Castro, Maria G; Fink, David J; Goins, William F; Gray, Steven J; Lowenstein, Pedro R; Vandenberghe, Luk H; Wilson, Thomas J; Wolfe, John H; Glorioso, Joseph C | Nature reviews. Neurology | 2013 May | 277-91 | 23609618 |
| Patterns of nucleotide and haplotype diversity at ICAM-1 across global human populations with varying levels of malaria exposure. | Gomez, Felicia; Tomas, Gil; Ko, Wen-Ya; Ranciaro, Alessia; Froment, Alain; Ibrahim, Muntaser; Lema, Godfrey; Nyambo, Thomas B; Omar, Sabah A; Wambebe, Charles; Hirbo, Jibril B; Rocha, Jorge; Tishkoff, Sarah A | Human genetics | 2013 Sep | 987-99 | 23609612 |
| Encoding through patterns: regression tree-based neuronal population models. | Haslinger, Robert; Pipa, Gordon; Lewis, Laura D; Nikolic, Danko; Williams, Ziv; Brown, Emery | Neural computation | 2013 Aug | 1953-93 | 23607564 |
| Neural evidence that human emotions share core affective properties. | Wilson-Mendenhall, Christine D; Barrett, Lisa Feldman; Barsalou, Lawrence W | Psychological science | 2013 Jun | 947-56 | 23603916 |
| Photoacoustic and optical coherence tomography of epilepsy with high temporal and spatial resolution and dual optical contrasts. | Tsytsarev, Vassiliy; Rao, Bin; Maslov, Konstantin I; Li, Li; Wang, Lihong V | Journal of neuroscience methods | 2013 Jun 15 | 142-5 | 23603664 |
| The immune system as a sensor of the metabolic state. | Odegaard, Justin I; Chawla, Ajay | Immunity | 2013 Apr 18 | 644-54 | 23601683 |
| Sex differences in the neural correlates of affective experience. | Moriguchi, Yoshiya; Touroutoglou, Alexandra; Dickerson, Bradford C; Barrett, Lisa Feldman | Social cognitive and affective neuroscience. | 2014 May; | 591-600 | 23596188 |
| Analysis of the murine immune response to pulmonary delivery of precisely fabricated nano- and microscale particles. | Roberts, Reid A; Shen, Tammy; Allen, Irving C; Hasan, Warefta; DeSimone, Joseph M; Ting, Jenny P Y | PloS one | 2013 | e62115 | 23593509 |
| A real-time brain-machine interface combining motor target and trajectory intent using an optimal feedback control design. | Shanechi, Maryam M; Williams, Ziv M; Wornell, Gregory W; Hu, Rollin C; Powers, Marissa; Brown, Emery N | PloS one | 2013 | e59049 | 23593130 |
| Higher frequency of genetic variants conferring increased risk for ADRs for commonly used drugs treating cancer, AIDS and tuberculosis in persons of African descent. | Aminkeng, F; Ross, C J D; Rassekh, S R; Brunham, L R; Sistonen, J; Dube, M-P; Ibrahim, M; Nyambo, T B; Omar, S A; Froment, A; Bodo, J-M; Tishkoff, S; Carleton, B C; Hayden, M R | The pharmacogenomics journal | 2013 Apr 16 | 23588107 | |
| Teaching the principles of statistical dynamics. | Ghosh, Kingshuk; Dill, Ken A; Inamdar, Mandar M; Seitaridou, Effrosyni; Phillips, Rob | American journal of physics | 2006 Feb 1 | 123-133 | 23585693 |
| The Glove-like Structure of the Conserved Membrane Protein TatC Provides Insight into Signal Sequence Recognition in Twin-Arginine Translocation. | Ramasamy, Sureshkumar; Abrol, Ravinder; Suloway, Christian J M; Clemons Jr, William M | Structure (London, England : 1993) | 2013 May 7 | 777-88 | 23583035 |
| TNF dually mediates resistance and susceptibility to mycobacteria via mitochondrial reactive oxygen species. | Roca, Francisco J; Ramakrishnan, Lalita | Cell | 2013 Apr 25 | 521-34 | 23582643 |
| Type 2 innate signals stimulate fibro/adipogenic progenitors to facilitate muscle regeneration. | Heredia, Jose E; Mukundan, Lata; Chen, Francis M; Mueller, Alisa A; Deo, Rahul C; Locksley, Richard M; Rando, Thomas A; Chawla, Ajay | Cell | 2013 Apr 11 | 376-88 | 23582327 |
| Monitoring of post-translational modification dynamics with genetically encoded fluorescent reporters. | Hertel, Fabian; Zhang, Jin | Biopolymers | 2013 Apr 10 | NULL | 23576192 |
| Design and validation of a real-time spiking-neural-network decoder for brain-machine interfaces. | Dethier, Julie; Nuyujukian, Paul; Ryu, Stephen I; Shenoy, Krishna V; Boahen, Kwabena | Journal of neural engineering | 2013 Jun | 036008 | 23574919 |
| Design and validation of a real-time spiking-neural-network decoder for brain-machine interfaces. | Dethier, Julie; Nuyujukian, Paul; Ryu, Stephen I; Shenoy, Krishna V; Boahen, Kwabena | Journal of neural engineering | 2013 Jun | 36008 | 23574919 |
| Multifunctional three-dimensional macroporous nanoelectronic networks for smart materials. | Liu, Jia; Xie, Chong; Dai, Xiaochuan; Jin, Lihua; Zhou, Wei; Lieber, Charles M | Proceedings of the National Academy of Sciences of the United States of America | 2013 Apr 23 | 6694-9 | 23569270 |
| Regulation of immune responses and tolerance: the microRNA perspective. | Chen, Chang-Zheng; Schaffert, Steven; Fragoso, Rita; Loh, Christina | Immunological reviews | 2013 May | 112-28 | 23550642 |
| Construction of human activity-based phosphorylation networks. | Newman, Robert H; Hu, Jianfei; Rho, Hee-Sool; Xie, Zhi; Woodard, Crystal; Neiswinger, John; Cooper, Christopher; Shirley, Matthew; Clark, Hillary M; Hu, Shaohui; Hwang, Woochang; Jeong, Jun Seop; Wu, George; Lin, Jimmy; Gao, Xinxin; Ni, Qiang; Goel, Renu; | Molecular systems biology | 2013 | 655 | 23549483 |
| Construction of human activity-based phosphorylation networks. | Newman, Robert H; Hu, Jianfei; Rho, Hee-Sool; Xie, Zhi; Woodard, Crystal; Neiswinger, John; Cooper, Christopher; Shirley, Matthew; Clark, Hillary M; Hu, Shaohui; Hwang, Woochang; Jeong, Jun Seop; Wu, George; Lin, Jimmy; Gao, Xinxin; Ni, Qiang; Goel, Renu; Xia, Shuli; Ji, Hongkai; Dalby, Kevin N; Birnbaum, Morris J; Cole, Philip A; Knapp, Stefan; Ryazanov, Alexey G; Zack, Donald J; Blackshaw, Seth; Pawson, Tony; Gingras, Anne-Claude; Desiderio, Stephen; Pandey, Akhilesh; Turk, Benjamin E; Zhang, Jin; Zhu, Heng; Qian, Jiang | Molecular systems biology | 2013 | 655 | 23549483 |
| TALEN-based Gene Correction for Epidermolysis Bullosa. | Osborn, Mark J; Starker, Colby G; McElroy, Amber N; Webber, Beau R; Riddle, Megan J; Xia, Lily; Defeo, Anthony P; Gabriel, Richard; Schmidt, Manfred; Von Kalle, Christof; Carlson, Daniel F; Maeder, Morgan L; Joung, J Keith; Wagner, John E; Voytas, Daniel | Molecular therapy : the journal of the American Society of Gene Therapy | 2013 Jun | 1151-9 | 23546300 |
| Bumetanide enhances phenobarbital efficacy in a rat model of hypoxic neonatal seizures. | Cleary, Ryan T; Sun, Hongyu; Huynh, Thanhthao; Manning, Simon M; Li, Yijun; Rotenberg, Alexander; Talos, Delia M; Kahle, Kristopher T; Jackson, Michele; Rakhade, Sanjay N; Berry, Gerard; Jensen, Frances E | PloS one | 2013 | e57148 | 23536761 |
| Facile and stabile linkages through tyrosine: bioconjugation strategies with the tyrosine-click reaction. | Ban, Hitoshi; Nagano, Masanobu; Gavrilyuk, Julia; Hakamata, Wataru; Inokuma, Tsubasa; Barbas 3rd, Carlos F | Bioconjugate chemistry | 2013 Apr 17 | 520-32 | 23534985 |
| How bacteria survive an acid trip. | Hingorani, Karan S; Gierasch, Lila M | Proceedings of the National Academy of Sciences of the United States of America | 2013 Apr 2 | 5279-80 | 23530238 |
| Hunger-promoting hypothalamic neurons modulate effector and regulatory T-cell responses. | Matarese, Giuseppe; Procaccini, Claudio; Menale, Ciro; Kim, Jae Geun; Kim, Jung Dae; Diano, Sabrina; Diano, Nadia; De Rosa, Veronica; Dietrich, Marcelo O; Horvath, Tamas L | Proceedings of the National Academy of Sciences of the United States of America | 2013 Apr 9 | 6193-8 | 23530205 |
| Molecular tools for chemical biotechnology. | Galanie, Stephanie; Siddiqui, Michael S; Smolke, Christina D | Current opinion in biotechnology | 2013 Mar 22 | 23528237 | |
| Macaque monkeys perceive the flash lag illusion. | Subramaniyan, Manivannan; Ecker, Alexander S; Berens, Philipp; Tolias, Andreas S | PloS one | 2013 | e58788 | 23527024 |
| Single-molecule imaging of transcription factor binding to DNA in live mammalian cells. | Gebhardt, J Christof M; Suter, David M; Roy, Rahul; Zhao, Ziqing W; Chapman, Alec R; Basu, Srinjan; Maniatis, Tom; Xie, X Sunney | Nature methods | 2013 May | 421-6 | 23524394 |
| Global analysis of phosphorylation networks in humans. | Hu, Jianfei; Rho, Hee-Sool; Newman, Robert H; Hwang, Woochang; Neiswinger, John; Zhu, Heng; Zhang, Jin; Qian, Jiang | Biochimica et biophysica acta | 2013 Mar 21 | 23524292 | |
| Global analysis of phosphorylation networks in humans. | Hu, Jianfei; Rho, Hee-Sool; Newman, Robert H; Hwang, Woochang; Neiswinger, John; Zhu, Heng; Zhang, Jin; Qian, Jiang | Biochimica et biophysica acta | 2013 Mar 21 | NULL | 23524292 |
| Nanotools for neuroscience and brain activity mapping. | Alivisatos, A Paul; Andrews, Anne M; Boyden, Edward S; Chun, Miyoung; Church, George M; Deisseroth, Karl; Donoghue, John P; Fraser, Scott E; Lippincott-Schwartz, Jennifer; Looger, Loren L; Masmanidis, Sotiris; McEuen, Paul L; Nurmikko, Arto V; Park, Hongk | ACS nano | 2013 Mar 26 | 1850-66 | 23514423 |
| Deciphering molecular circuits from genetic variation underlying transcriptional responsiveness to stimuli. | Gat-Viks, Irit; Chevrier, Nicolas; Wilentzik, Roni; Eisenhaure, Thomas; Raychowdhury, Raktima; Steuerman, Yael; Shalek, Alex K; Hacohen, Nir; Amit, Ido; Regev, Aviv | Nature biotechnology | 2013 Apr | 342-9 | 23503680 |
| High-sensitivity ultrasound-modulated optical tomography with a photorefractive polymer. | Suzuki, Yuta; Lai, Puxiang; Xu, Xiao; Wang, Lihong | Optics letters | 2013 Mar 15 | 899-901 | 23503253 |
| Statistical mechanics of Monod-Wyman-Changeux (MWC) models. | Marzen, Sarah; Garcia, Hernan G; Phillips, Rob | Journal of molecular biology | 2013 May 13 | 1433-60 | 23499654 |
| Altered social behavior and neuronal development in mice lacking the Uba6-Use1 ubiquitin transfer system. | Lee, Peter C W; Dodart, Jean-Cosme; Aron, Liviu; Finley, Lydia W; Bronson, Roderick T; Haigis, Marcia C; Yankner, Bruce A; Harper, J Wade | Molecular cell | 2013 Apr 25 | 172-84 | 23499007 |
| Homo-dimerization and ligand binding by the leucine-rich repeat domain at RHG1/RFS2 underlying resistance to two soybean pathogens. | Afzal, Ahmed J; Srour, Ali; Goil, Abhishek; Vasudaven, Sheeja; Liu, Tianyun; Samudrala, Ram; Dogra, Navneet; Kohli, Punit; Malakar, Ayan; Lightfoot, David A | BMC plant biology | 2013 | 43 | 23497186 |
| Nonlinear mode-coupling in nanomechanical systems. | Matheny, M H; Villanueva, L G; Karabalin, R B; Sader, J E; Roukes, M L | Nano letters | 2013 Apr 10 | 1622-6 | 23496001 |
| A plasmon-assisted optofluidic (PAOF) system for measuring the photothermal conversion efficiencies of gold nanostructures and controlling an electrical switch. | Zeng, Jie; Goldfeld, David; Xia, Younan | Angewandte Chemie (International ed. in English) | 2013 Apr 8 | 4169-73 | 23494970 |
| The fumagillin biosynthetic gene cluster in Aspergillus fumigatus encodes a cryptic terpene cyclase involved in the formation of ýý-trans-bergamotene. | Lin, Hsiao-Ching; Chooi, Yit-Heng; Dhingra, Sourabh; Xu, Wei; Calvo, Ana M; Tang, Yi | Journal of the American Chemical Society | 2013 Mar 27 | 4616-9 | 23488861 |
| Electroencephalogram signatures of loss and recovery of consciousness from propofol. | Purdon, Patrick L; Pierce, Eric T; Mukamel, Eran A; Prerau, Michael J; Walsh, John L; Wong, Kin Foon K; Salazar-Gomez, Andres F; Harrell, Priscilla G; Sampson, Aaron L; Cimenser, Aylin; Ching, ShiNung; Kopell, Nancy J; Tavares-Stoeckel, Casie; Habeeb, Kat | Proceedings of the National Academy of Sciences of the United States of America | 2013 Mar 19 | E1142-51 | 23487781 |
| Nanowire electrodes for high-density stimulation and measurement of neural circuits. | Robinson, Jacob T; Jorgolli, Marsela; Park, Hongkun | Frontiers in neural circuits | 2013 | 38 | 23486552 |
| Mammalian target of rapamycin complex 1 activation negatively regulates Polo-like kinase 2-mediated homeostatic compensation following neonatal seizures. | Sun, Hongyu; Kosaras, Bela; Klein, Peter M; Jensen, Frances E | Proceedings of the National Academy of Sciences of the United States of America | 2013 Mar 26 | 5199-204 | 23479645 |
| Neuroscience. The brain activity map. | Alivisatos, A Paul; Chun, Miyoung; Church, George M; Deisseroth, Karl; Donoghue, John P; Greenspan, Ralph J; McEuen, Paul L; Roukes, Michael L; Sejnowski, Terrence J; Weiss, Paul S; Yuste, Rafael | Science (New York, N.Y.) | 2013 Mar 15 | 1284-5 | 23470729 |
| Looking within the zebrafish to understand the tuberculous granuloma. | Ramakrishnan, Lalita | Advances in experimental medicine and biology | 2013 | 251-66 | 23468113 |
| Dynamic regulatory network controlling TH17 cell differentiation. | Yosef, Nir; Shalek, Alex K; Gaublomme, Jellert T; Jin, Hulin; Lee, Youjin; Awasthi, Amit; Wu, Chuan; Karwacz, Katarzyna; Xiao, Sheng; Jorgolli, Marsela; Gennert, David; Satija, Rahul; Shakya, Arvind; Lu, Diana Y; Trombetta, John J; Pillai, Meenu R; Ratcli | Nature | 2013 Apr 25 | 461-8 | 23467089 |
| Induction of pathogenic TH17 cells by inducible salt-sensing kinase SGK1. | Wu, Chuan; Yosef, Nir; Thalhamer, Theresa; Zhu, Chen; Xiao, Sheng; Kishi, Yasuhiro; Regev, Aviv; Kuchroo, Vijay K | Nature | 2013 Apr 25 | 513-7 | 23467085 |
| Beyond transposons: the epigenetic and somatic functions of the Piwi-piRNA mechanism. | Peng, Jamy C; Lin, Haifan | Current opinion in cell biology | 2013 Apr | 190-4 | 23465540 |
| Retinal gene therapy coming of age. | Cepko, Connie L; Vandenberghe, Luk H | Human gene therapy. | 2013 Mar; | 242-4 | 23458444 |
| Imaging trans-cellular neurexin-neuroligin interactions by enzymatic probe ligation. | Liu, Daniel S; Loh, Ken H; Lam, Stephanie S; White, Katharine A; Ting, Alice Y | PloS one | 2013 | e52823 | 23457442 |
| Functional inhibition of UQCRB suppresses angiogenesis in zebrafish. | Cho, Yoon Sun; Jung, Hye Jin; Seok, Seung Hyeok; Payumo, Alexander Y; Chen, James K; Kwon, Ho Jeong | Biochemical and biophysical research communications | 2013 Apr 19 | 396-400 | 23454382 |
| Early folding events protect aggregation-prone regions of a ýý-rich protein. | Budyak, Ivan L; Krishnan, Beena; Marcelino-Cruz, Anna M; Ferrolino, Mylene C; Zhuravleva, Anastasia; Gierasch, Lila M | Structure (London, England : 1993) | 2013 Mar 5 | 476-85 | 23454187 |
| EcdGHK are three tailoring iron oxygenases for amino acid building blocks of the echinocandin scaffold. | Jiang, Wei; Cacho, Ralph A; Chiou, Grace; Garg, Neil K; Tang, Yi; Walsh, Christopher T | Journal of the American Chemical Society | 2013 Mar 20 | 4457-66 | 23451921 |
| Synthetic nanoelectronic probes for biological cells and tissues. | Tian, Bozhi; Lieber, Charles M | Annual review of analytical chemistry (Palo Alto, Calif.) | 2013 Jun 12 | 31-51 | 23451719 |
| A brain-to-brain interface for real-time sharing of sensorimotor information. | Pais-Vieira, Miguel; Lebedev, Mikhail; Kunicki, Carolina; Wang, Jing; Nicolelis, Miguel A L | Scientific reports. | 2013; | 23448946 | |
| Simultaneous top-down modulation of the primary somatosensory cortex and thalamic nuclei during active tactile discrimination. | Pais-Vieira, Miguel; Lebedev, Mikhail A; Wiest, Michael C; Nicolelis, Miguel A L | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2013 Feb 27 | 4076-93 | 23447616 |
| Identification of nonvisual photomotor response cells in the vertebrate hindbrain. | Kokel, David; Dunn, Timothy W; Ahrens, Misha B; Alshut, Rudiger; Cheung, Chung Yan J; Saint-Amant, Louis; Bruni, Giancarlo; Mateus, Rita; van Ham, Tjakko J; Shiraki, Tomoya; Fukada, Yoshitaka; Kojima, Daisuke; Yeh, Jing-Ruey J; Mikut, Ralf; von Lintig, Jo | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2013 Feb 27 | 3834-43 | 23447595 |
| Reflection-mode multifocal optical-resolution photoacoustic microscopy. | Li, Guo; Maslov, Konstantin I; Wang, Lihong V | Journal of biomedical optics | 2013 Mar | 30501 | 23446704 |
| A major epigenetic programming mechanism guided by piRNAs. | Huang, Xiao A; Yin, Hang; Sweeney, Sarah; Raha, Debasish; Snyder, Michael; Lin, Haifan | Developmental cell | 2013 Mar 11 | 502-16 | 23434410 |
| Fungicidal drugs induce a common oxidative-damage cellular death pathway. | Belenky, Peter; Camacho, Diogo; Collins, James J | Cell reports | 2013 Feb 21 | 350-8 | 23416050 |
| The NeST long ncRNA controls microbial susceptibility and epigenetic activation of the interferon-ýý locus. | Gomez, J Antonio; Wapinski, Orly L; Yang, Yul W; Bureau, Jean-Francois; Gopinath, Smita; Monack, Denise M; Chang, Howard Y; Brahic, Michel; Kirkegaard, Karla | Cell | 2013 Feb 14 | 743-54 | 23415224 |
| Synthetic biology: advancing the design of diverse genetic systems. | Wang, Yen-Hsiang; Wei, Kathy Y; Smolke, Christina D | Annual review of chemical and biomolecular engineering | 2013 | 69-102 | 23413816 |
| Probing allostery through DNA. | Kim, Sangjin; Brostromer, Erik; Xing, Dong; Jin, Jianshi; Chong, Shasha; Ge, Hao; Wang, Siyuan; Gu, Chan; Yang, Lijiang; Gao, Yi Qin; Su, Xiao-dong; Sun, Yujie; Xie, X Sunney | Science (New York, N.Y.) | 2013 Feb 15 | 816-9 | 23413354 |
| Bridging the transgenerational gap with epigenetic memory. | Lim, Jana P; Brunet, Anne | Trends in genetics : TIG | 2013 Mar | 176-86 | 23410786 |
| Observation and characterization of the vestige of the jamming transition in a thermal three-dimensional system. | Caswell, Thomas A; Zhang, Zexin; Gardel, Margaret L; Nagel, Sidney R | Physical review. E, Statistical, nonlinear, and soft matter physics. | 2013 Jan; | 12303 | 23410327 |
| The proteomic response to mutants of the Escherichia coli RNA degradosome. | Zhou, Li; Zhang, Ang B; Wang, Rong; Marcotte, Edward M; Vogel, Christine | Molecular bioSystems | 2013 Apr 5 | 750-7 | 23403814 |
| Perceiving invisible light through a somatosensory cortical prosthesis. | Thomson, Eric E; Carra, Rafael; Nicolelis, Miguel A L | Nature communications | 2013 | 1482 | 23403583 |
| Astrocyte pathology and the absence of non-cell autonomy in an induced pluripotent stem cell model of TDP-43 proteinopathy. | Serio, Andrea; Bilican, Bilada; Barmada, Sami J; Ando, Dale Michael; Zhao, Chen; Siller, Rick; Burr, Karen; Haghi, Ghazal; Story, David; Nishimura, Agnes Lumi; Carrasco, Monica A; Phatnani, Hemali P; Shum, Carole; Wilmut, Ian; Maniatis, Tom; Shaw, Christopher E; Finkbeiner, Steven; Chandran, Siddharthan | Proceedings of the National Academy of Sciences of the United States of America. | 2013 Mar 19; | 23401527 | |
| Robust, synergistic regulation of human gene expression using TALE activators. | Maeder, Morgan L; Linder, Samantha J; Reyon, Deepak; Angstman, James F; Fu, Yanfang; Sander, Jeffry D; Joung, J Keith | Nature methods | 2013 Mar | 243-5 | 23396285 |
| Long-term dynamics of CA1 hippocampal place codes. | Ziv, Yaniv; Burns, Laurie D; Cocker, Eric D; Hamel, Elizabeth O; Ghosh, Kunal K; Kitch, Lacey J; El Gamal, Abbas; Schnitzer, Mark J | Nature neuroscience | 2013 Mar | 264-6 | 23396101 |
| In vitro human corticogenesis. | Wang, Yanling; Dolmetsch, Ricardo | Neuron | 2013 Feb 6 | 379-81 | 23395367 |
| A comprehensive approach to zinc-finger recombinase customization enables genomic targeting in human cells. | Gaj, Thomas; Mercer, Andrew C; Sirk, Shannon J; Smith, Heather L; Barbas 3rd, Carlos F | Nucleic acids research | 2013 Apr 1 | 3937-46 | 23393187 |
| Intricate interplay between astrocytes and motor neurons in ALS. | Phatnani, Hemali P; Guarnieri, Paolo; Friedman, Brad A; Carrasco, Monica A; Muratet, Michael; O'Keeffe, Sean; Nwakeze, Chiamaka; Pauli-Behn, Florencia; Newberry, Kimberly M; Meadows, Sarah K; Tapia, Juan Carlos; Myers, Richard M; Maniatis, Tom | Proceedings of the National Academy of Sciences of the United States of America. | 2013 Feb 19; | 23388633 | |
| Comparison study of gold nanohexapods, nanorods, and nanocages for photothermal cancer treatment. | Wang, Yucai; Black, Kvar C L; Luehmann, Hannah; Li, Weiyang; Zhang, Yu; Cai, Xin; Wan, Dehui; Liu, Si-Yun; Li, Max; Kim, Paul; Li, Zhi-Yuan; Wang, Lihong V; Liu, Yongjian; Xia, Younan | ACS nano | 2013 Mar 26 | 2068-77 | 23383982 |
| Theoretical and experimental dissection of DNA loop-mediated repression. | Boedicker, James Q; Garcia, Hernan G; Phillips, Rob | Physical review letters | 2013 Jan 4 | 018101 | 23383841 |
| AAV9 targets cone photoreceptors in the nonhuman primate retina. | Vandenberghe, Luk H; Bell, Peter; Maguire, Albert M; Xiao, Ru; Hopkins, Tim B; Grant, Rebecca; Bennett, Jean; Wilson, James M | PloS one | 2013 | e53463 | 23382846 |
| Medical school gift restriction policies and physician prescribing of newly marketed psychotropic medications: difference-in-differences analysis. | King, Marissa; Essick, Connor; Bearman, Peter; Ross, Joseph S | BMJ (Clinical research ed.) | 2013 | f264 | 23372175 |
| Systematic identification of signal-activated stochastic gene regulation. | Neuert, Gregor; Munsky, Brian; Tan, Rui Zhen; Teytelman, Leonid; Khammash, Mustafa; van Oudenaarden, Alexander | Science (New York, N.Y.) | 2013 Feb 1 | 584-7 | 23372015 |
| Physics. Measuring mass in seconds. | Debs, John E; Robins, Nicholas P; Close, John D | Science (New York, N.Y.) | 2013 Feb 1 | 532-3 | 23372004 |
| Proteomic mapping of mitochondria in living cells via spatially restricted enzymatic tagging. | Rhee, Hyun-Woo; Zou, Peng; Udeshi, Namrata D; Martell, Jeffrey D; Mootha, Vamsi K; Carr, Steven A; Ting, Alice Y | Science (New York, N.Y.) | 2013 Mar 15 | 1328-31 | 23371551 |
| Genome mining of a prenylated and immunosuppressive polyketide from pathogenic fungi. | Chooi, Yit-Heng; Fang, Jinxu; Liu, Hong; Filler, Scott G; Wang, Pin; Tang, Yi | Organic letters | 2013 Feb 15 | 780-3 | 23368997 |
| A spatially-regularized dynamic source localization algorithm for EEG. | Pirondini, E; Babadi, B; Lamus, C; Brown, E N; Purdon, P L | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2012 | 6752-5 | 23367479 |
| A fast iterative greedy algorithm for MEG source localization. | Obregon-Henao, G; Babadi, B; Lamus, C; Brown, E N; Purdon, P L | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2012 | 6748-51 | 23367478 |
| Beamforming approach to phase-amplitude modulation analysis of multi-channel EEG. | Sampson, A L; Babadi, B; Prerau, M J; Mukamel, E A; Brown, E N; Purdon, P L | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2012 | 6731-4 | 23367474 |
| A framework for relating neural activity to freely moving behavior. | Foster, Justin D; Nuyujukian, Paul; Freifeld, Oren; Ryu, Stephen I; Black, Michael J; Shenoy, Krishna V | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2012 | 2736-9 | 23366491 |
| A brain machine interface control algorithm designed from a feedback control perspective. | Gilja, Vikash; Nuyujukian, Paul; Chestek, Cindy A; Cunningham, John P; Yu, Byron M; Fan, Joline M; Ryu, Stephen I; Shenoy, Krishna V | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2012 | 1318-22 | 23366141 |
| Transductive neural decoding for unsorted neuronal spikes of rat hippocampus. | Chen, Zhe; Kloosterman, Fabian; Layton, Stuart; Wilson, Matthew A | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2012 | 1310-3 | 23366139 |
| A superposable silicon synapse with programmable reversal potential. | Benjamin, Ben V; Arthur, John V; Gao, Peiran; Merolla, Paul; Boahen, Kwabena | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2012 | 771-4 | 23366006 |
| Microbiology. Undernutrition--looking within for answers. | Relman, David A | Science (New York, N.Y.). | 2013 Feb 1; | 530-2 | 23363770 |
| RNA-guided editing of bacterial genomes using CRISPR-Cas systems. | Jiang, Wenyan; Bikard, David; Cox, David; Zhang, Feng; Marraffini, Luciano A | Nature biotechnology | 2013 Mar | 233-9 | 23360965 |
| Efficient genome editing in zebrafish using a CRISPR-Cas system. | Hwang, Woong Y; Fu, Yanfang; Reyon, Deepak; Maeder, Morgan L; Tsai, Shengdar Q; Sander, Jeffry D; Peterson, Randall T; Yeh, J-R Joanna; Joung, J Keith | Nature biotechnology | 2013 Mar | 227-9 | 23360964 |
| Radioluminescent gold nanocages with controlled radioactivity for real-time in vivo imaging. | Wang, Yucai; Liu, Yongjian; Luehmann, Hannah; Xia, Xiaohu; Wan, Dehui; Cutler, Cathy; Xia, Younan | Nano letters | 2013 Feb 13 | 581-5 | 23360442 |
| Investigation of fungal iterative polyketide synthase functions using partially assembled intermediates. | Gao, Zhizeng; Wang, Jingjing; Norquay, Amy K; Qiao, Kangjian; Tang, Yi; Vederas, John C | Journal of the American Chemical Society | 2013 Feb 6 | 1735-8 | 23356934 |
| Materials science: Synthetic polymers with biological rigidity. | Gardel, Margaret Lise | Nature. | 2013 Jan 31; | 618-9 | 23354043 |
| Large-scale brain networks in affective and social neuroscience: towards an integrative functional architecture of the brain. | Barrett, Lisa Feldman; Satpute, Ajay Bhaskar | Current opinion in neurobiology | 2013 Jun | 361-72 | 23352202 |
| Distinct distal gut microbiome diversity and composition in healthy children from Bangladesh and the United States. | Lin, Audrie; Bik, Elisabeth M; Costello, Elizabeth K; Dethlefsen, Les; Haque, Rashidul; Relman, David A; Singh, Upinder | PloS one | 2013 | e53838 | 23349750 |
| Transcriptional reprogramming of mature CD4ýýý helper T cells generates distinct MHC class II-restricted cytotoxic T lymphocytes. | Mucida, Daniel; Husain, Mohammad Mushtaq; Muroi, Sawako; van Wijk, Femke; Shinnakasu, Ryo; Naoe, Yoshinori; Reis, Bernardo Sgarbi; Huang, Yujun; Lambolez, Florence; Docherty, Michael; Attinger, Antoine; Shui, Jr-Wen; Kim, Gisen; Lena, Christopher J; Sakag | Nature immunology | 2013 Mar | 281-9 | 23334788 |
| Use of somatic mutations to quantify random contributions to mouse development. | Zhou, Wenyu; Tan, Yunbing; Anderson, Donovan J; Crist, Eva M; Ruohola-Baker, Hannele; Salipante, Stephen J; Horwitz, Marshall S | BMC genomics | 2013 | 39 | 23327737 |
| Engineering a BCR-ABL-activated caspase for the selective elimination of leukemic cells. | Kurokawa, Manabu; Ito, Takahiro; Yang, Chih-Sheng; Zhao, Chen; Macintyre, Andrew N; Rizzieri, David A; Rathmell, Jeffrey C; Deininger, Michael W; Reya, Tannishtha; Kornbluth, Sally | Proceedings of the National Academy of Sciences of the United States of America | 2013 Feb 5 | 2300-5 | 23324740 |
| Mechanistic evaluation of the pros and cons of digital RT-LAMP for HIV-1 viral load quantification on a microfluidic device and improved efficiency via a two-step digital protocol. | Sun, Bing; Shen, Feng; McCalla, Stephanie E; Kreutz, Jason E; Karymov, Mikhail A; Ismagilov, Rustem F | Analytical chemistry | 2013 Feb 5 | 1540-6 | 23324061 |
| Hypothalamic control of energy balance: insights into the role of synaptic plasticity. | Dietrich, Marcelo O; Horvath, Tamas L | Trends in neurosciences | 2013 Feb | 65-73 | 23318157 |
| Synthesis of Ag nanocubes 18-32 nm in edge length: the effects of polyol on reduction kinetics, size control, and reproducibility. | Wang, Yi; Zheng, Yiqun; Huang, Cheng Zhi; Xia, Younan | Journal of the American Chemical Society | 2013 Feb 6 | 1941-51 | 23317148 |
| Timothy syndrome is associated with activity-dependent dendritic retraction in rodent and human neurons. | Krey, Jocelyn F; Pasca, Sergiu P; Shcheglovitov, Aleksandr; Yazawa, Masayuki; Schwemberger, Rachel; Rasmusson, Randall; Dolmetsch, Ricardo E | Nature neuroscience | 2013 Feb | 201-9 | 23313911 |
| Pleiotropic actions of insulin resistance and inflammation in metabolic homeostasis. | Odegaard, Justin I; Chawla, Ajay | Science (New York, N.Y.) | 2013 Jan 11 | 172-7 | 23307735 |
| Accelerated high-yield generation of limb-innervating motor neurons from human stem cells. | Amoroso, Mackenzie W; Croft, Gist F; Williams, Damian J; O'Keeffe, Sean; Carrasco, Monica A; Davis, Anne R; Roybon, Laurent; Oakley, Derek H; Maniatis, Tom; Henderson, Christopher E; Wichterle, Hynek | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2013 Jan 9 | 574-86 | 23303937 |
| Restoration of the gut microbial habitat as a disease therapy. | Relman, David A | Nature biotechnology. | 2013 Jan; | 35-7 | 23302933 |
| Single-cell and population NF-ýýB dynamic responses depend on lipopolysaccharide preparation. | Gutschow, Miriam V; Hughey, Jacob J; Ruggero, Nicholas A; Bajar, Bryce T; Valle, Sean D; Covert, Markus W | PloS one | 2013 | e53222 | 23301045 |
| Modeling Timothy syndrome with iPS cells. | Yazawa, Masayuki; Dolmetsch, Ricardo E | Journal of cardiovascular translational research | 2013 Feb | 1-9 | 23299782 |
| Function of Piwi, a nuclear Piwi/Argonaute protein, is independent of its slicer activity. | Darricarrere, Nicole; Liu, Na; Watanabe, Toshiaki; Lin, Haifan | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jan 22 | 1297-302 | 23297219 |
| Endothelial barrier disruption and recovery is controlled by substrate stiffness. | Birukova, Anna A; Tian, Xinyong; Cokic, Ivan; Beckham, Yvonne; Gardel, Margaret L; Birukov, Konstantin G | Microvascular research | 2013 May | 50-7 | 23296034 |
| Deconvolving the roles of Wnt ligands and receptors in sensing and amplification. | Tan, Rui Zhen; Ji, Ni; Mentink, Remco A; Korswagen, Hendrik C; van Oudenaarden, Alexander | Molecular systems biology | 2013 Jan 8 | 631 | 23295860 |
| The hundred-year emotion war: are emotions natural kinds or psychological constructions? Comment on Lench, Flores, and Bench (2011). | Lindquist, Kristen A; Siegel, Erika H; Quigley, Karen S; Barrett, Lisa Feldman | Psychological bulletin | 2013 Jan | 255-63 | 23294094 |
| Potentiating antibacterial activity by predictably enhancing endogenous microbial ROS production. | Brynildsen, Mark P; Winkler, Jonathan A; Spina, Catherine S; MacDonald, I Cody; Collins, James J | Nature biotechnology | 2013 Feb | 160-5 | 23292609 |
| Multiplex genome engineering using CRISPR/Cas systems. | Cong, Le; Ran, F Ann; Cox, David; Lin, Shuailiang; Barretto, Robert; Habib, Naomi; Hsu, Patrick D; Wu, Xuebing; Jiang, Wenyan; Marraffini, Luciano A; Zhang, Feng | Science (New York, N.Y.) | 2013 Feb 15 | 819-23 | 23287718 |
| Design and synthesis of diverse functional kinked nanowire structures for nanoelectronic bioprobes. | Xu, Lin; Jiang, Zhe; Qing, Quan; Mai, Liqiang; Zhang, Qingjie; Lieber, Charles M | Nano letters | 2013 Feb 13 | 746-51 | 23273386 |
| Listeria monocytogenes infection causes metabolic shifts in Drosophila melanogaster. | Chambers, Moria C; Song, Kyung Han; Schneider, David S | PloS one | 2012 | e50679 | 23272066 |
| How the fly balances its ability to combat different pathogens. | Chambers, Moria C; Lightfield, Karla L; Schneider, David S | PLoS pathogens | 2012 | e1002970 | 23271964 |
| Tuning promoter strength through RNA polymerase binding site design in Escherichia coli. | Brewster, Robert C; Jones, Daniel L; Phillips, Rob | PLoS computational biology | 2012 | e1002811 | 23271961 |
| Spatial clusters of autism births and diagnoses point to contextual drivers ofýýincreased prevalence. | Mazumdar, Soumya; Winter, Alix; Liu, Ka-Yuet; Bearman, Peter | Social science & medicine (1982) | 2012 Dec 8 | 23267775 | |
| A versatile genome-scale PCR-based pipeline for high-definition DNA FISH. | Bienko, Magda; Crosetto, Nicola; Teytelman, Leonid; Klemm, Sandy; Itzkovitz, Shalev; van Oudenaarden, Alexander | Nature methods | 2013 Feb | 122-4 | 23263692 |
| NMDA receptor regulation prevents regression of visual cortical function in the absence of Mecp2. | Durand, Severine; Patrizi, Annarita; Quast, Kathleen B; Hachigian, Lea; Pavlyuk, Roman; Saxena, Alka; Carninci, Piero; Hensch, Takao K; Fagiolini, Michela | Neuron | 2012 Dec 20 | 1078-90 | 23259945 |
| Shining light on nuclear-targeted therapy using gold nanostar constructs. | Dam, Duncan Hieu M; Culver, Kayla S B; Sisco, Patrick N; Odom, Teri W | Therapeutic delivery | 2012 Nov | 1263-7 | 23259247 |
| Discovery of potent myeloid cell leukemia 1 (Mcl-1) inhibitors using fragment-based methods and structure-based design. | Friberg, Anders; Vigil, Dominico; Zhao, Bin; Daniels, R Nathan; Burke, Jason P; Garcia-Barrantes, Pedro M; Camper, DeMarco; Chauder, Brian A; Lee, Taekyu; Olejniczak, Edward T; Fesik, Stephen W | Journal of medicinal chemistry | 2013 Jan 10 | 15-30 | 23244564 |
| Probing enzymatic activity inside living cells using a nanowire-cell "sandwich" assay. | Na, Yu-Ran; Kim, So Yeon; Gaublomme, Jellert T; Shalek, Alex K; Jorgolli, Marsela; Park, Hongkun; Yang, Eun Gyeong | Nano letters | 2013 Jan 9 | 153-8 | 23244056 |
| Antimicrobial Efflux Pumps and Mycobacterium Tuberculosis Drug Tolerance: Evolutionary Considerations. | Szumowski, John D; Adams, Kristin N; Edelstein, Paul H; Ramakrishnan, Lalita | Current topics in microbiology and immunology | 2012 Dec 16 | NULL | 23242857 |
| The smallest stroke: occlusion of one penetrating vessel leads to infarction and a cognitive deficit. | Shih, Andy Y; Blinder, Pablo; Tsai, Philbert S; Friedman, Beth; Stanley, Geoffrey; Lyden, Patrick D; Kleinfeld, David | Nature neuroscience | 2013 Jan | 55-63 | 23242312 |
| Versatile design and synthesis platform for visualizing genomes with Oligopaint FISH probes. | Beliveau, Brian J; Joyce, Eric F; Apostolopoulos, Nicholas; Yilmaz, Feyza; Fonseka, Chamith Y; McCole, Ruth B; Chang, Yiming; Li, Jin Billy; Senaratne, Tharanga Niroshini; Williams, Benjamin R; Rouillard, Jean-Marie; Wu, Chao-ting | Proceedings of the National Academy of Sciences of the United States of America | 2012 Dec 26 | 21301-6 | 23236188 |
| Structural arrangement of the intracellular Ca2+ binding domains of the cardiac Na+/Ca2+ exchanger (NCX1.1): effects of Ca2+ binding. | Dixit, Mrinalini; Kim, Sunghoon; Matthews, Gage F; Erreger, Kevin; Galli, Aurelio; Cobb, Charles E; Hustedt, Eric J; Beth, Albert H | The Journal of biological chemistry. | 2013 Feb 08; | 23233681 | |
| The relation between valence and arousal in subjective experience. | Kuppens, Peter; Tuerlinckx, Francis; Russell, James A; Barrett, Lisa Feldman | Psychological bulletin | 2013 Jul | 917-40 | 23231533 |
| Quantitative analysis of the fate of gold nanocages in vitro and in vivo after uptake by U87-MG tumor cells. | Cho, Eun Chul; Zhang, Yu; Cai, Xin; Moran, Christine M; Wang, Lihong V; Xia, Younan | Angewandte Chemie (International ed. in English) | 2013 Jan 21 | 1152-5 | 23225223 |
| Identity and function of a large gene network underlying mutagenic repair of DNA breaks. | Al Mamun, Abu Amar M; Lombardo, Mary-Jane; Shee, Chandan; Lisewski, Andreas M; Gonzalez, Caleb; Lin, Dongxu; Nehring, Ralf B; Saint-Ruf, Claude; Gibson, Janet L; Frisch, Ryan L; Lichtarge, Olivier; Hastings, P J; Rosenberg, Susan M | Science (New York, N.Y.) | 2012 Dec 7 | 1344-8 | 23224554 |
| Glutamate receptor 1 phosphorylation at serine 831 and 845 modulates seizure susceptibility and hippocampal hyperexcitability after early life seizures. | Rakhade, Sanjay N; Fitzgerald, Erin F; Klein, Peter M; Zhou, Chengwen; Sun, Hongyu; Huganir, Richard L; Hunganir, Richard L; Jensen, Frances E | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2012 Dec 5 | 17800-12 | 23223299 |
| A marriage made to last in drug design. | Dietrich, Marcelo O; Horvath, Tamas L | Nature medicine | 2012 Dec | 1737-8 | 23223057 |
| Activation of D1 dopamine receptors induces emergence from isoflurane general anesthesia. | Taylor, Norman E; Chemali, Jessica J; Brown, Emery N; Solt, Ken | Anesthesiology | 2013 Jan | 30-9 | 23221866 |
| Optimal operating points of oscillators using nonlinear resonators. | Kenig, Eyal; Cross, M C; Villanueva, L G; Karabalin, R B; Matheny, M H; Lifshitz, Ron; Roukes, M L | Physical review. E, Statistical, nonlinear, and soft matter physics | 2012 Nov | 56207 | 23214857 |
| Localizer: fast, accurate, open-source, and modular software package for superresolution microscopy. | Dedecker, Peter; Duwe, Sam; Neely, Robert K; Zhang, Jin | Journal of biomedical optics | 2012 Dec | 126008 | 23208219 |
| Assessing the effects of pharmacological agents on respiratory dynamics using time-series modeling. | Wong, Kin Foon Kevin; Gong, Jen J; Cotten, Joseph F; Solt, Ken; Brown, Emery N | IEEE transactions on bio-medical engineering | 2013 Apr | 1118-25 | 23193230 |
| Nanowire-mediated delivery enables functional interrogation of primary immune cells: application to the analysis of chronic lymphocytic leukemia. | Shalek, Alex K; Gaublomme, Jellert T; Wang, Lili; Yosef, Nir; Chevrier, Nicolas; Andersen, Mette S; Robinson, Jacob T; Pochet, Nathalie; Neuberg, Donna; Gertner, Rona S; Amit, Ido; Brown, Jennifer R; Hacohen, Nir; Regev, Aviv; Wu, Catherine J; Park, Hongk | Nano letters | 2012 Dec 12 | 6498-504 | 23190424 |
| Understanding the TXA seizure connection. | Schwinn, Debra A; Mackensen, G Burkhard; Brown, Emery N | The Journal of clinical investigation | 2012 Dec 3 | 4339-41 | 23187134 |
| Disordered Protein Diffusion under Crowded Conditions. | Wang, Yaqiang; Benton, Laura A; Singh, Vishavpreet; Pielak, Gary J | The journal of physical chemistry letters | 2012 Sep 20 | 2703-2706 | 23185649 |
| Electrospun nanofibers for regenerative medicine. | Liu, Wenying; Thomopoulos, Stavros; Xia, Younan | Advanced healthcare materials | 2012 Jan 11 | 10-25 | 23184683 |
| Single-cell analysis of ribonucleotide reductase transcriptional and translational response to DNA damage. | Mazumder, Aprotim; Tummler, Katja; Bathe, Mark; Samson, Leona D | Molecular and cellular biology | 2013 Feb | 635-42 | 23184665 |
| Neovascularization in biodegradable inverse opal scaffolds with uniform and precisely controlled pore sizes. | Choi, Sung-Wook; Zhang, Yu; Macewan, Matthew R; Xia, Younan | Advanced healthcare materials | 2013 Jan | 145-54 | 23184495 |
| Phosphoribosomes for fingerprinting neurons. | Dietrich, Marcelo O; Horvath, Tamas L | Cell | 2012 Nov 21 | 934-6 | 23178116 |
| Proprioceptive coupling within motor neurons drives C. elegans forward locomotion. | Wen, Quan; Po, Michelle D; Hulme, Elizabeth; Chen, Sway; Liu, Xinyu; Kwok, Sen Wai; Gershow, Marc; Leifer, Andrew M; Butler, Victoria; Fang-Yen, Christopher; Kawano, Taizo; Schafer, William R; Whitesides, George; Wyart, Matthieu; Chklovskii, Dmitri B; Zhe | Neuron | 2012 Nov 21 | 750-61 | 23177960 |
| WholeCellKB: model organism databases for comprehensive whole-cell models. | Karr, Jonathan R; Sanghvi, Jayodita C; Macklin, Derek N; Arora, Abhishek; Covert, Markus W | Nucleic acids research | 2013 Jan | D787-92 | 23175606 |
| TALENs: a widely applicable technology for targeted genome editing. | Joung, J Keith; Sander, Jeffry D | Nature reviews. Molecular cell biology | 2013 Jan | 49-55 | 23169466 |
| Therapeutic helminth infection of macaques with idiopathic chronic diarrhea alters the inflammatory signature and mucosal microbiota of the colon. | Broadhurst, Mara Jana; Ardeshir, Amir; Kanwar, Bittoo; Mirpuri, Julie; Gundra, Uma Mahesh; Leung, Jacqueline M; Wiens, Kirsten E; Vujkovic-Cvijin, Ivan; Kim, Charlie C; Yarovinsky, Felix; Lerche, Nicholas W; McCune, Joseph M; Loke, P'ng | PLoS pathogens | 2012 | e1003000 | 23166490 |
| Generating extracellular amyloid aggregates using E. coli cells. | Sivanathan, Viknesh; Hochschild, Ann | Genes & development | 2012 Dec 1 | 2659-67 | 23166018 |
| The tower of Babel: survey on concepts and terminology in electrical status epilepticus in sleep and continuous spikes and waves during sleep in North America. | Fernandez, Ivan Sanchez; Chapman, Kevin E; Peters, Jurriaan M; Kothare, Sanjeev V; Nordli Jr, Douglas R; Jensen, Frances E; Berg, Anne T; Loddenkemper, Tobias | Epilepsia. | 2013 Apr; | 741-50 | 23163318 |
| A high-performance neural prosthesis enabled by control algorithm design. | Gilja, Vikash; Nuyujukian, Paul; Chestek, Cindy A; Cunningham, John P; Yu, Byron M; Fan, Joline M; Churchland, Mark M; Kaufman, Matthew T; Kao, Jonathan C; Ryu, Stephen I; Shenoy, Krishna V | Nature neuroscience | 2012 Dec | 1752-7 | 23160043 |
| Requirements for contractility in disordered cytoskeletal bundles. | Lenz, Martin; Gardel, Margaret L; Dinner, Aaron R | New journal of physics | 2012 Mar 1 | 23155355 | |
| Leptin and insulin pathways in POMC and AgRP neurons that modulate energy balance and glucose homeostasis. | Varela, Luis; Horvath, Tamas L | EMBO reports | 2012 Dec | 1079-86 | 23146889 |
| Neural population partitioning and a concurrent brain-machine interface for sequential motor function. | Shanechi, Maryam M; Hu, Rollin C; Powers, Marissa; Wornell, Gregory W; Brown, Emery N; Williams, Ziv M | Nature neuroscience | 2012 Dec | 1715-22 | 23143511 |
| Capturing the cloud: UAP56 in nuage assembly and function. | Lin, Haifan | Cell | 2012 Nov 9 | 699-701 | 23141532 |
| Antiepileptic effects of levetiracetam in a rodent neonatal seizure model. | Talos, Delia M; Chang, Meayoung; Kosaras, Bela; Fitzgerald, Erin; Murphy, Andrew; Folkerth, Rebecca Dunn; Jensen, Frances E | Pediatric research | 2013 Jan | 24-30 | 23138400 |
| Multiplexed visualization of dynamic signaling networks using genetically encoded fluorescent protein-based biosensors. | Depry, Charlene; Mehta, Sohum; Zhang, Jin | Pflugers Archiv : European journal of physiology | 2013 Mar | 373-81 | 23138230 |
| Identification and treatment of heme depletion attributed to overexpression of a lineage of evolved P450 monooxygenases. | Michener, Joshua K; Nielsen, Jens; Smolke, Christina D | Proceedings of the National Academy of Sciences of the United States of America | 2012 Nov 20 | 19504-9 | 23129650 |
| Elk-1 phosphorylated at threonine-417 is present in diverse cancers and correlates with differentiation grade of colonic adenocarcinoma. | Morris, Jacqueline F; Sul, Jai-Yoon; Kim, Min-Sun; Klein-Szanto, Andres J; Schochet, Terri; Rustgi, Anil; Eberwine, James H | Human pathology. | 2013 May; | 766-76 | 23114923 |
| Neuron-to-neuron transmission of ýý-synuclein fibrils through axonal transport. | Freundt, Eric C; Maynard, Nate; Clancy, Eileen K; Roy, Shyamali; Bousset, Luc; Sourigues, Yannick; Covert, Markus; Melki, Ronald; Kirkegaard, Karla; Brahic, Michel | Annals of neurology | 2012 Oct | 517-24 | 23109146 |
| Recent Developments in Shape-Controlled Synthesis of Silver Nanocrystals. | Xia, Xiaohu; Zeng, Jie; Zhang, Qiang; Moran, Christine H; Xia, Younan | The journal of physical chemistry. C, Nanomaterials and interfaces | 2012 | 21647-21656 | 23105955 |
| Determining host metabolic limitations on viral replication via integrated modeling and experimental perturbation. | Birch, Elsa W; Ruggero, Nicholas A; Covert, Markus W | PLoS computational biology | 2012 | e1002746 | 23093930 |
| Affective value and associative processing share a cortical substrate. | Shenhav, Amitai; Barrett, Lisa Feldman; Bar, Moshe | Cognitive, affective & behavioral neuroscience | 2013 Mar | 46-59 | 23090717 |
| A functional selection model explains evolutionary robustness despite plasticity in regulatory networks. | Habib, Naomi; Wapinski, Ilan; Margalit, Hanah; Regev, Aviv; Friedman, Nir | Molecular systems biology. | 2012; | 619 | 23089682 |
| Cell-based measures of viral persistence are associated with immune activation and programmed cell death protein 1 (PD-1)-expressing CD4+ T cells. | Hatano, Hiroyu; Jain, Vivek; Hunt, Peter W; Lee, Tzong-Hae; Sinclair, Elizabeth; Do, Tri D; Hoh, Rebecca; Martin, Jeffrey N; McCune, Joseph M; Hecht, Frederick; Busch, Michael P; Deeks, Steven G | The Journal of infectious diseases | 2013 Jul | 50-6 | 23089590 |
| Genome-wide identification and quantitative analysis of cleaved tRNA fragments induced by cellular stress. | Saikia, Mridusmita; Krokowski, Dawid; Guan, Bo-Jhih; Ivanov, Pavel; Parisien, Marc; Hu, Guo-fu; Anderson, Paul; Pan, Tao; Hatzoglou, Maria | The Journal of biological chemistry | 2012 Dec 14 | 42708-25 | 23086926 |
| Engineered ascorbate peroxidase as a genetically encoded reporter for electron microscopy. | Martell, Jeffrey D; Deerinck, Thomas J; Sancak, Yasemin; Poulos, Thomas L; Mootha, Vamsi K; Sosinsky, Gina E; Ellisman, Mark H; Ting, Alice Y | Nature biotechnology | 2012 Nov | 1143-8 | 23086203 |
| AgRP neurons: a switch between peripheral carbohydrate and lipid utilization. | Varela, Luis; Horvath, Tamas L | The EMBO journal | 2012 Nov 14 | 4252-4 | 23085989 |
| Insights into tuberculosis from the zebrafish model. | Berg, Russell D; Ramakrishnan, Lalita | Trends in molecular medicine | 2012 Dec | 689-90 | 23084762 |
| Transcriptional silencing by single-stranded RNAs targeting a noncoding RNA that overlaps a gene promoter. | Matsui, Masayuki; Prakash, Thazha P; Corey, David R | ACS chemical biology | 2013 Jan 18 | 122-6 | 23082936 |
| Oligodendrocyte regeneration after neonatal hypoxia requires FoxO1-mediated p27Kip1 expression. | Jablonska, Beata; Scafidi, Joseph; Aguirre, Adan; Vaccarino, Flora; Nguyen, Vien; Borok, Erzsebet; Horvath, Tamas L; Rowitch, David H; Gallo, Vittorio | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2012 Oct 17 | 14775-93 | 23077062 |
| Intrinsic amygdala-cortical functional connectivity predicts social network size in humans. | Bickart, Kevin C; Hollenbeck, Mark C; Barrett, Lisa Feldman; Dickerson, Bradford C | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2012 Oct 17 | 14729-41 | 23077058 |
| A bioreducible polymer for efficient delivery of Fas-silencing siRNA into stem cell spheroids and enhanced therapeutic angiogenesis. | Shim, Min Suk; Bhang, Suk Ho; Yoon, Kyunghwan; Choi, Kyunghee; Xia, Younan | Angewandte Chemie (International ed. in English) | 2012 Nov 19 | 11899-903 | 23074025 |
| The genetic prehistory of southern Africa. | Pickrell, Joseph K; Patterson, Nick; Barbieri, Chiara; Berthold, Falko; Gerlach, Linda; Guldemann, Tom; Kure, Blesswell; Mpoloka, Sununguko Wata; Nakagawa, Hirosi; Naumann, Christfried; Lipson, Mark; Loh, Po-Ru; Lachance, Joseph; Mountain, Joanna; Bustama | Nature communications | 2012 | 1143 | 23072811 |
| Identification and characterization of the chaetoviridin and chaetomugilin gene cluster in Chaetomium globosum reveal dual functions of an iterative highly-reducing polyketide synthase. | Winter, Jaclyn M; Sato, Michio; Sugimoto, Satoru; Chiou, Grace; Garg, Neil K; Tang, Yi; Watanabe, Kenji | Journal of the American Chemical Society | 2012 Oct 31 | 17900-3 | 23072467 |
| Controlling enzymatic action in living cells with a kinase-inducible bimolecular switch. | Sample, Vedangi; Ni, Qiang; Mehta, Sohum; Inoue, Takanari; Zhang, Jin | ACS chemical biology | 2013 Jan 18 | 116-21 | 23072367 |
| Leptin regulates glutamate and glucose transporters in hypothalamic astrocytes. | Fuente-Martin, Esther; Garcia-Caceres, Cristina; Granado, Miriam; de Ceballos, Maria L; Sanchez-Garrido, Miguel Angel; Sarman, Beatrix; Liu, Zhong-Wu; Dietrich, Marcelo O; Tena-Sempere, Manuel; Argente-Arizon, Pilar; Diaz, Francisca; Argente, Jesus; Horva | The Journal of clinical investigation | 2012 Nov 1 | 3900-13 | 23064363 |
| Finding a better drug for epilepsy: antiepileptogenesis targets. | Kobow, Katja; Auvin, Stephane; Jensen, Frances; Loscher, Wolfgang; Mody, Istvan; Potschka, Heidrun; Prince, David; Sierra, Alejandra; Simonato, Michele; Pitkanen, Asla; Nehlig, Astrid; Rho, Jong M | Epilepsia | 2012 Nov | 1868-76 | 23061663 |
| Stochastic facilitation of artificial tactile sensation in primates. | Medina, Leonel E; Lebedev, Mikhail A; O'Doherty, Joseph E; Nicolelis, Miguel A L | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2012 Oct 10 | 14271-5 | 23055496 |
| High-performance binary protein interaction screening in a microfluidic format. | Meier, Matthias; Sit, Rene; Pan, Wenying; Quake, Stephen R | Analytical chemistry | 2012 Nov 6 | 9572-8 | 23051662 |
| Regulation of a viral proteinase by a peptide and DNA in one-dimensional space: IV. viral proteinase slides along DNA to locate and process its substrates. | Blainey, Paul C; Graziano, Vito; Perez-Berna, Ana J; McGrath, William J; Flint, S Jane; San Martin, Carmen; Xie, X Sunney; Mangel, Walter F | The Journal of biological chemistry | 2013 Jan 18 | 2092-102 | 23043138 |
| Regulation of a viral proteinase by a peptide and DNA in one-dimensional space: II. adenovirus proteinase is activated in an unusual one-dimensional biochemical reaction. | Graziano, Vito; Luo, Guobin; Blainey, Paul C; Perez-Berna, Ana J; McGrath, William J; Flint, S Jane; San Martin, Carmen; Xie, X Sunney; Mangel, Walter F | The Journal of biological chemistry | 2013 Jan 18 | 2068-80 | 23043137 |
| Regulation of a viral proteinase by a peptide and DNA in one-dimensional space: I. binding to DNA AND to hexon of the precursor to protein VI, pVI, of human adenovirus. | Graziano, Vito; McGrath, William J; Suomalainen, Maarit; Greber, Urs F; Freimuth, Paul; Blainey, Paul C; Luo, Guobin; Xie, X Sunney; Mangel, Walter F | The Journal of biological chemistry | 2013 Jan 18 | 2059-67 | 23043136 |
| Iterative plug-and-play methodology for constructing and modifying synthetic gene networks. | Litcofsky, Kevin D; Afeyan, Raffi B; Krom, Russell J; Khalil, Ahmad S; Collins, James J | Nature methods | 2012 Nov | 1077-80 | 23042452 |
| Two mechanisms produce mutation hotspots at DNA breaks in Escherichia coli. | Shee, Chandan; Gibson, Janet L; Rosenberg, Susan M | Cell reports | 2012 Oct 25 | 714-21 | 23041320 |
| A functional architecture of the human brain: emerging insights from the science of emotion. | Lindquist, Kristen A; Barrett, Lisa Feldman | Trends in cognitive sciences | 2012 Nov | 533-40 | 23036719 |
| Engineering designer transcription activator-like effector nucleases (TALENs) by REAL or REAL-Fast assembly. | Reyon, Deepak; Khayter, Cyd; Regan, Maureen R; Joung, J Keith; Sander, Jeffry D | Current protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.] | 2012 Oct | Unit 12.15 | 23026907 |
| The miRNA Regulation of Stem Cells. | Huang, Xiao Albert; Lin, Haifan | Wiley interdisciplinary reviews. Membrane transport and signaling | 2012 Jan 1 | 83-95 | 23024929 |
| FUS-SMN protein interactions link the motor neuron diseases ALS and SMA. | Yamazaki, Tomohiro; Chen, Shi; Yu, Yong; Yan, Biao; Haertlein, Tyler C; Carrasco, Monica A; Tapia, Juan C; Zhai, Bo; Das, Rita; Lalancette-Hebert, Melanie; Sharma, Aarti; Chandran, Siddharthan; Sullivan, Gareth; Nishimura, Agnes Lumi; Shaw, Christopher E; | Cell reports | 2012 Oct 25 | 799-806 | 23022481 |
| Quantitative analysis of the human airway microbial ecology reveals a pervasive signature for cystic fibrosis. | Blainey, Paul C; Milla, Carlos E; Cornfield, David N; Quake, Stephen R | Science translational medicine | 2012 Sep 26 | 153ra130 | 23019655 |
| Chimeric TALE recombinases with programmable DNA sequence specificity. | Mercer, Andrew C; Gaj, Thomas; Fuller, Roberta P; Barbas 3rd, Carlos F | Nucleic acids research | 2012 Nov | 11163-72 | 23019222 |
| Estimation theoretic measure of resolution for stochastic localization microscopy. | Fitzgerald, James E; Lu, Ju; Schnitzer, Mark J | Physical review letters | 2012 Jul 27 | 048102 | 23006110 |
| Distributed control in a mean-field cortical network model: implications for seizure suppression. | Ching, ShiNung; Brown, Emery N; Kramer, Mark A | Physical review. E, Statistical, nonlinear, and soft matter physics | 2012 Aug | 021920 | 23005798 |
| Passive phase noise cancellation scheme. | Kenig, Eyal; Cross, M C; Lifshitz, Ron; Karabalin, R B; Villanueva, L G; Matheny, M H; Roukes, M L | Physical review letters | 2012 Jun 29 | 264102 | 23004985 |
| Contractile units in disordered actomyosin bundles arise from F-actin buckling. | Lenz, Martin; Thoresen, Todd; Gardel, Margaret L; Dinner, Aaron R | Physical review letters. | 2012 Jun 8; | 238107 | 23003998 |
| Stress-induced variations in the stiffness of micro- and nanocantilever beams. | Karabalin, R B; Villanueva, L G; Matheny, M H; Sader, J E; Roukes, M L | Physical review letters | 2012 Jun 8 | 236101 | 23003973 |
| Controlling interneuron activity in Caenorhabditis elegans to evoke chemotactic behaviour. | Kocabas, Askin; Shen, Ching-Han; Guo, Zengcai V; Ramanathan, Sharad | Nature. | 2012 Oct 11; | 273-7 | 23000898 |
| Identification and characterization of the echinocandin B biosynthetic gene cluster from Emericella rugulosa NRRL 11440. | Cacho, Ralph A; Jiang, Wei; Chooi, Yit-Heng; Walsh, Christopher T; Tang, Yi | Journal of the American Chemical Society | 2012 Oct 10 | 16781-90 | 22998630 |
| Understanding the relationship between brain gene expression and social behavior: lessons from the honey bee. | Zayed, Amro; Robinson, Gene E | Annual review of genetics | 2012 | 591-615 | 22994354 |
| Inferring evoked brain connectivity through adaptive perturbation. | Lepage, Kyle Q; Ching, ShiNung; Kramer, Mark A | Journal of computational neuroscience | 2013 Apr | 303-18 | 22990598 |
| Reversible switching between epigenetic states in honeybee behavioral subcastes. | Herb, Brian R; Wolschin, Florian; Hansen, Kasper D; Aryee, Martin J; Langmead, Ben; Irizarry, Rafael; Amdam, Gro V; Feinberg, Andrew P | Nature neuroscience | 2012 Oct | 1371-3 | 22983211 |
| Single-cell expression analyses during cellular reprogramming reveal an early stochastic and a late hierarchic phase. | Buganim, Yosef; Faddah, Dina A; Cheng, Albert W; Itskovich, Elena; Markoulaki, Styliani; Ganz, Kibibi; Klemm, Sandy L; van Oudenaarden, Alexander; Jaenisch, Rudolf | Cell | 2012 Sep 14 | 1209-22 | 22980981 |
| Neutrophils exert protection in the early tuberculous granuloma by oxidative killing of mycobacteria phagocytosed from infected macrophages. | Yang, Chao-Tsung; Cambier, C J; Davis, J Muse; Hall, Christopher J; Crosier, Philip S; Ramakrishnan, Lalita | Cell host & microbe | 2012 Sep 13 | 301-12 | 22980327 |
| Acoustic radiation force for vascular cell therapy: inýývitroýývalidation. | Kaya, Mehmet; Toma, Catalin; Wang, Jianjun; Grata, Michelle; Fu, Huili; Villanueva, Flordeliza S; Chen, Xucai | Ultrasound in medicine & biology | 2012 Nov | 1989-97 | 22975034 |
| Self-assembly of filamentous amelogenin requires calcium and phosphate: from dimers via nanoribbons to fibrils. | Martinez-Avila, Olga; Wu, Shenping; Kim, Seung Joong; Cheng, Yifan; Khan, Feroz; Samudrala, Ram; Sali, Andrej; Horst, Jeremy A; Habelitz, Stefan | Biomacromolecules | 2012 Nov 12 | 3494-502 | 22974364 |
| The enzymatic and metabolic capabilities of early life. | Goldman, Aaron David; Baross, John A; Samudrala, Ram | PloS one | 2012 | e39912 | 22970111 |
| Protein-protected Au clusters as a new class of nanoscale biosensor for label-free fluorescence detection of proteases. | Wang, Yucai; Wang, Yi; Zhou, Fengbo; Kim, Paul; Xia, Younan | Small (Weinheim an der Bergstrasse, Germany) | 2012 Dec 21 | 3769-73 | 22969016 |
| A chemically programmed antibody is a long-lasting and potent inhibitor of influenza neuraminidase. | Hayakawa, Masahiko; Toda, Narihiro; Carrillo, Nancy; Thornburg, Natalie J; Crowe Jr, James E; Barbas 3rd, Carlos F | Chembiochem : a European journal of chemical biology | 2012 Oct 15 | 2191-5 | 22965667 |
| Induction and molecular signature of pathogenic TH17 cells. | Lee, Youjin; Awasthi, Amit; Yosef, Nir; Quintana, Francisco J; Xiao, Sheng; Peters, Anneli; Wu, Chuan; Kleinewietfeld, Markus; Kunder, Sharon; Hafler, David A; Sobel, Raymond A; Regev, Aviv; Kuchroo, Vijay K | Nature immunology | 2012 Oct | 991-9 | 22961052 |
| Pretreatment of Asian elephant (Elephas maximus) spermatozoa with cholesterol-loaded cyclodextrins and glycerol addition at 4ýýC improves cryosurvival. | Kiso, Wendy K; Asano, Atsushi; Travis, Alexander J; Schmitt, Dennis L; Brown, Janine L; Pukazhenthi, Budhan S | Reproduction, fertility, and development | 2012 | 1134-42 | 22954260 |
| Gross chromosomal rearrangement mediated by DNA replication in stressed cells: evidence from Escherichia coli. | Moore, J M; Wimberly, Hallie; Thornton, P C; Rosenberg, Susan M; Hastings, P J | Annals of the New York Academy of Sciences | 2012 Sep | 103-9 | 22954223 |
| Misacylation of tRNA with methionine in Saccharomyces cerevisiae. | Wiltrout, Elizabeth; Goodenbour, Jeffrey M; Frechin, Mathieu; Pan, Tao | Nucleic acids research | 2012 Nov 1 | 10494-506 | 22941646 |
| A census of human soluble protein complexes. | Havugimana, Pierre C; Hart, G Traver; Nepusz, Tamas; Yang, Haixuan; Turinsky, Andrei L; Li, Zhihua; Wang, Peggy I; Boutz, Daniel R; Fong, Vincent; Phanse, Sadhna; Babu, Mohan; Craig, Stephanie A; Hu, Pingzhao; Wan, Cuihong; Vlasblom, James; Dar, Vaqaar-un | Cell | 2012 Aug 31 | 1068-81 | 22939629 |
| Reductive stress linked to small HSPs, G6PD, and Nrf2 pathways in heart disease. | Brewer, Alison C; Mustafi, Soumyajit Banerjee; Murray, Thomas V A; Rajasekaran, Namakkal Soorappan; Benjamin, Ivor J | Antioxidants & redox signaling | 2013 Mar 20 | 1114-27 | 22938199 |
| Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization. | Sharon, Itai; Morowitz, Michael J; Thomas, Brian C; Costello, Elizabeth K; Relman, David A; Banfield, Jillian F | Genome research | 2013 Jan | 111-20 | 22936250 |
| Upregulation of retinal dehydrogenase 2 in alternatively activated macrophages during retinoid-dependent type-2 immunity to helminth infection in mice. | Broadhurst, Mara J; Leung, Jacqueline M; Lim, K C; Girgis, Natasha M; Gundra, Uma Mahesh; Fallon, Padraic G; Premenko-Lanier, Mary; McKerrow, James H; McCune, Joseph M; Loke, P'ng | PLoS pathogens | 2012 | e1002883 | 22927819 |
| Preclinical evaluation of HIV eradication strategies in the simian immunodeficiency virus-infected rhesus macaque: a pilot study testing inhibition of indoleamine 2,3-dioxygenase. | Dunham, Richard M; Gordon, Shari N; Vaccari, Monica; Piatak, Michael; Huang, Yong; Deeks, Steven G; Lifson, Jeffrey; Franchini, Genoveffa; McCune, Joseph M | AIDS research and human retroviruses | 2013 Feb | 207-14 | 22924680 |
| Transgenerational epigenetic effects of the Apobec1 cytidine deaminase deficiency on testicular germ cell tumor susceptibility and embryonic viability. | Nelson, Vicki R; Heaney, Jason D; Tesar, Paul J; Davidson, Nicholas O; Nadeau, Joseph H | Proceedings of the National Academy of Sciences of the United States of America | 2012 Oct 9 | E2766-73 | 22923694 |
| Single-protein nanomechanical mass spectrometry in real time. | Hanay, M S; Kelber, S; Naik, A K; Chi, D; Hentz, S; Bullard, E C; Colinet, E; Duraffourg, L; Roukes, M L | Nature nanotechnology | 2012 Sep | 602-8 | 22922541 |
| Macroporous nanowire nanoelectronic scaffolds for synthetic tissues. | Tian, Bozhi; Liu, Jia; Dvir, Tal; Jin, Lihua; Tsui, Jonathan H; Qing, Quan; Suo, Zhigang; Langer, Robert; Kohane, Daniel S; Lieber, Charles M | Nature materials | 2012 Nov | 986-94 | 22922448 |
| Modulating the strength and threshold of NOTCH oncogenic signals by mir-181a-1/b-1. | Fragoso, Rita; Mao, Tin; Wang, Song; Schaffert, Steven; Gong, Xue; Yue, Sibiao; Luong, Richard; Min, Hyeyoung; Yashiro-Ohtani, Yumi; Davis, Mark; Pear, Warren; Chen, Chang-Zheng | PLoS genetics | 2012 | e1002855 | 22916024 |
| Bipolar cell-photoreceptor connectivity in the zebrafish (Danio rerio) retina. | Li, Yong N; Tsujimura, Taro; Kawamura, Shoji; Dowling, John E | The Journal of comparative neurology | 2012 Nov 1 | 3786-802 | 22907678 |
| Multicolored stain-free histopathology with coherent Raman imaging. | Freudiger, Christian W; Pfannl, Rolf; Orringer, Daniel A; Saar, Brian G; Ji, Minbiao; Zeng, Qing; Ottoboni, Linda; Wei, Ying; Ying, Wei; Waeber, Christian; Sims, John R; De Jager, Philip L; Sagher, Oren; Philbert, Martin A; Xu, Xiaoyin; Kesari, Santosh; X | Laboratory investigation; a journal of technical methods and pathology | 2012 Oct | 1492-502 | 22906986 |
| UCP2 induced by natural birth regulates neuronal differentiation of the hippocampus and related adult behavior. | Simon-Areces, Julia; Dietrich, Marcelo O; Hermes, Gretchen; Garcia-Segura, Luis Miguel; Arevalo, Maria-Angeles; Horvath, Tamas L | PloS one | 2012 | e42911 | 22905184 |
| Mouse ooplasm confers context-specific reprogramming capacity. | Chan, Michelle M; Smith, Zachary D; Egli, Dieter; Regev, Aviv; Meissner, Alexander | Nature genetics | 2012 Sep | 978-80 | 22902786 |
| Cyclization of fungal nonribosomal peptides by a terminal condensation-like domain. | Gao, Xue; Haynes, Stuart W; Ames, Brian D; Wang, Peng; Vien, Linda P; Walsh, Christopher T; Tang, Yi | Nature chemical biology | 2012 Oct | 823-30 | 22902615 |
| Strategic protein target analysis for developing drugs to stop dental caries. | Horst, J A; Pieper, U; Sali, A; Zhan, L; Chopra, G; Samudrala, R; Featherstone, J D B | Advances in dental research | 2012 Sep | 86-93 | 22899687 |
| A real-time automated point-process method for the detection and correction of erroneous and ectopic heartbeats. | Citi, Luca; Brown, Emery N; Barbieri, Riccardo | IEEE transactions on bio-medical engineering | 2012 Oct | 2828-37 | 22875239 |
| HSPB2 is dispensable for the cardiac hypertrophic response but reduces mitochondrial energetics following pressure overload in mice. | Ishiwata, Takahiro; Orosz, Andras; Wang, Xiaohui; Mustafi, Soumyajit Banerjee; Pratt, Gregory W; Christians, Elisabeth S; Boudina, Sihem; Abel, E Dale; Benjamin, Ivor J | PloS one | 2012 | e42118 | 22870288 |
| A synthetic biology framework for programming eukaryotic transcription functions. | Khalil, Ahmad S; Lu, Timothy K; Bashor, Caleb J; Ramirez, Cherie L; Pyenson, Nora C; Joung, J Keith; Collins, James J | Cell | 2012 Aug 3 | 647-58 | 22863014 |
| The human microbiome: ecosystem resilience and health. | Relman, David A | Nutrition reviews | 2012 Aug | S2-9 | 22861804 |
| The disappearing seasonality of autism conceptions in California. | Mazumdar, Soumya; Liu, Ka-Yuet; Susser, Ezra; Bearman, Peter | PloS one | 2012 | e41265 | 22859972 |
| Limitations in anti-obesity drug development: the critical role of hunger-promoting neurons. | Dietrich, Marcelo O; Horvath, Tamas L | Nature reviews. Drug discovery | 2012 Sep | 675-91 | 22858652 |
| Vectorization of optically sectioned brain microvasculature: learning aids completion of vascular graphs by connecting gaps and deleting open-ended segments. | Kaufhold, John P; Tsai, Philbert S; Blinder, Pablo; Kleinfeld, David | Medical image analysis | 2012 Aug | 1241-58 | 22854035 |
| Evolutionary history and adaptation from high-coverage whole-genome sequences of diverse African hunter-gatherers. | Lachance, Joseph; Vernot, Benjamin; Elbers, Clara C; Ferwerda, Bart; Froment, Alain; Bodo, Jean-Marie; Lema, Godfrey; Fu, Wenqing; Nyambo, Thomas B; Rebbeck, Timothy R; Zhang, Kun; Akey, Joshua M; Tishkoff, Sarah A | Cell | 2012 Aug 3 | 457-69 | 22840920 |
| An in vivo platform for rapid high-throughput antitubercular drug discovery. | Takaki, Kevin; Cosma, Christine L; Troll, Mark A; Ramakrishnan, Lalita | Cell reports | 2012 Jul 26 | 175-84 | 22840407 |
| Operator sequence alters gene expression independently of transcription factor occupancy in bacteria. | Garcia, Hernan G; Sanchez, Alvaro; Boedicker, James Q; Osborne, Melisa; Gelles, Jeff; Kondev, Jane; Phillips, Rob | Cell reports | 2012 Jul 26 | 150-61 | 22840405 |
| Investigation of neovascularization in three-dimensional porous scaffolds in vivo by a combination of multiscale photoacoustic microscopy and optical coherence tomography. | Cai, Xin; Zhang, Yu; Li, Li; Choi, Sung-Wook; MacEwan, Matthew R; Yao, Junjie; Kim, Chulhong; Xia, Younan; Wang, Lihong V | Tissue engineering. Part C, Methods | 2013 Mar | 196-204 | 22838500 |
| Comprehensive interrogation of natural TALE DNA-binding modules and transcriptional repressor domains. | Cong, Le; Zhou, Ruhong; Kuo, Yu-Chi; Cunniff, Margaret; Zhang, Feng | Nature communications | 2012 | 968 | 22828628 |
| What sperm can teach us about energy production. | Mukai, C; Travis, A J | Reproduction in domestic animals = Zuchthygiene | 2012 Aug | 164-9 | 22827366 |
| Reprogramming movements: extraction of motor intentions from cortical ensemble activity when movement goals change. | Ifft, Peter J; Lebedev, Mikhail A; Nicolelis, Miguel A L | Frontiers in neuroengineering | 2012 | 16 | 22826698 |
| A whole-cell computational model predicts phenotype from genotype. | Karr, Jonathan R; Sanghvi, Jayodita C; Macklin, Derek N; Gutschow, Miriam V; Jacobs, Jared M; Bolival Jr, Benjamin; Assad-Garcia, Nacyra; Glass, John I; Covert, Markus W | Cell | 2012 Jul 20 | 389-401 | 22817898 |
| The dawn of virtual cell biology. | Freddolino, Peter L; Tavazoie, Saeed | Cell | 2012 Jul 20 | 248-50 | 22817888 |
| Sirtuin 1 and sirtuin 3: physiological modulators of metabolism. | Nogueiras, Ruben; Habegger, Kirk M; Chaudhary, Nilika; Finan, Brian; Banks, Alexander S; Dietrich, Marcelo O; Horvath, Tamas L; Sinclair, David A; Pfluger, Paul T; Tschop, Matthias H | Physiological reviews | 2012 Jul | 1479-514 | 22811431 |
| Mechanisms of intracellular scaling. | Levy, Daniel L; Heald, Rebecca | Annual review of cell and developmental biology | 2012 | 113-35 | 22804576 |
| Context matters: the illusive simplicity of macaque V1 receptive fields. | Haslinger, Robert; Pipa, Gordon; Lima, Bruss; Singer, Wolf; Brown, Emery N; Neuenschwander, Sergio | PloS one | 2012 | e39699 | 22802940 |
| Wisdom of crowds for robust gene network inference. | Marbach, Daniel; Costello, James C; Kuffner, Robert; Vega, Nicole M; Prill, Robert J; Camacho, Diogo M; Allison, Kyle R; DREAM5 Consortium; Kellis, Manolis; Collins, James J; Stolovitzky, Gustavo | Nature methods | 2012 Aug | 796-804 | 22796662 |
| Authorsýýý response: what are emotions and how are they created in the brain? | Lindquist, Kristen A; Wager, Tor D; Bliss-Moreau, Eliza; Kober, Hedy; Barret, Lisa Feldman | The Behavioral and brain sciences. | 2012 Jun; | 172-202 | 22783560 |
| ýý-Arrestin2 mediates the initiation and progression of myeloid leukemia. | Fereshteh, Mark; Ito, Takahiro; Kovacs, Jeffrey J; Zhao, Chen; Kwon, Hyog Young; Tornini, Valerie; Konuma, Takaaki; Chen, Minyong; Lefkowitz, Robert J; Reya, Tannishtha | Proceedings of the National Academy of Sciences of the United States of America | 2012 Jul 31 | 12532-7 | 22773819 |
| Otx2 binding to perineuronal nets persistently regulates plasticity in the mature visual cortex. | Beurdeley, Marine; Spatazza, Julien; Lee, Henry H C; Sugiyama, Sayaka; Bernard, Clemence; Di Nardo, Ariel A; Hensch, Takao K; Prochiantz, Alain | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2012 Jul 4 | 9429-37 | 22764251 |
| Non-invasive prenatal measurement of the fetal genome. | Fan, H Christina; Gu, Wei; Wang, Jianbin; Blumenfeld, Yair J; El-Sayed, Yasser Y; Quake, Stephen R | Nature | 2012 Jul 19 | 320-4 | 22763444 |
| Modeling human cortical development in vitro using induced pluripotent stem cells. | Mariani, Jessica; Simonini, Maria Vittoria; Palejev, Dean; Tomasini, Livia; Coppola, Gianfilippo; Szekely, Anna M; Horvath, Tamas L; Vaccarino, Flora M | Proceedings of the National Academy of Sciences of the United States of America | 2012 Jul 31 | 12770-5 | 22761314 |
| General principles of single-construct chromosomal gene drive. | Marshall, John M; Hay, Bruce A | Evolution; international journal of organic evolution | 2012 Jul | 2150-66 | 22759292 |
| Targeted gene knockout by direct delivery of zinc-finger nuclease proteins. | Gaj, Thomas; Guo, Jing; Kato, Yoshio; Sirk, Shannon J; Barbas 3rd, Carlos F | Nature methods | 2012 Aug | 805-7 | 22751204 |
| Structural diversity and African origin of the 17q21.31 inversion polymorphism. | Steinberg, Karyn Meltz; Antonacci, Francesca; Sudmant, Peter H; Kidd, Jeffrey M; Campbell, Catarina D; Vives, Laura; Malig, Maika; Scheinfeldt, Laura; Beggs, William; Ibrahim, Muntaser; Lema, Godfrey; Nyambo, Thomas B; Omar, Sabah A; Bodo, Jean-Marie; Fro | Nature genetics | 2012 Aug | 872-80 | 22751100 |
| Structural basis for germ-line gene usage of a potent class of antibodies targeting the CD4-binding site of HIV-1 gp120. | West Jr, Anthony P; Diskin, Ron; Nussenzweig, Michel C; Bjorkman, Pamela J | Proceedings of the National Academy of Sciences of the United States of America | 2012 Jul 24 | E2083-90 | 22745174 |
| Cementomimetics-constructing a cementum-like biomineralized microlayer via amelogenin-derived peptides. | Gungormus, Mustafa; Oren, Ersin E; Horst, Jeremy A; Fong, Hanson; Hnilova, Marketa; Somerman, Martha J; Snead, Malcolm L; Samudrala, Ram; Tamerler, Candan; Sarikaya, Mehmet | International journal of oral science | 2012 Jun | 69-77 | 22743342 |
| Minimal requirements for inhibition of MraY by lysis protein E from bacteriophage ýýX174. | Tanaka, Shiho; Clemons Jr, William M | Molecular microbiology | 2012 Sep | 975-85 | 22742425 |
| Hydroxychloroquine is associated with impaired interferon-alpha and tumor necrosis factor-alpha production by plasmacytoid dendritic cells in systemic lupus erythematosus. | Sacre, Karim; Criswell, Lindsey A; McCune, Joseph M | Arthritis research & therapy | 2012 | R155 | 22734582 |
| Mapping of visual receptive fields by tomographic reconstruction. | Pipa, Gordon; Chen, Zhe; Neuenschwander, Sergio; Lima, Bruss; Brown, Emery N | Neural computation | 2012 Oct | 2543-78 | 22734491 |
| AgRP neurons regulate development of dopamine neuronal plasticity and nonfood-associated behaviors. | Dietrich, Marcelo O; Bober, Jeremy; Ferreira, Jozelia G; Tellez, Luis A; Mineur, Yann S; Souza, Diogo O; Gao, Xiao-Bing; Picciotto, Marina R; Araujo, Ivan; Liu, Zhong-Wu; Horvath, Tamas L | Nature neuroscience | 2012 Aug | 1108-10 | 22729177 |
| A single-molecule Hershey-Chase experiment. | Van Valen, David; Wu, David; Chen, Yi-Ju; Tuson, Hannah; Wiggins, Paul; Phillips, Rob | Current biology : CB | 2012 Jul 24 | 1339-43 | 22727695 |
| The brain activity map project and the challenge of functional connectomics. | Alivisatos, A Paul; Chun, Miyoung; Church, George M; Greenspan, Ralph J; Roukes, Michael L; Yuste, Rafael | Neuron | 2012 Jun 21 | 970-4 | 22726828 |
| Gut immune maturation depends on colonization with a host-specific microbiota. | Chung, Hachung; Pamp, Sunje J; Hill, Jonathan A; Surana, Neeraj K; Edelman, Sanna M; Troy, Erin B; Reading, Nicola C; Villablanca, Eduardo J; Wang, Sen; Mora, Jorge R; Umesaki, Yoshinori; Mathis, Diane; Benoist, Christophe; Relman, David A; Kasper, Dennis | Cell | 2012 Jun 22 | 1578-93 | 22726443 |
| Subcortical neuronal ensembles: an analysis of motor task association, tremor, oscillations, and synchrony in human patients. | Hanson, Timothy L; Fuller, Andrew M; Lebedev, Mikhail A; Turner, Dennis A; Nicolelis, Miguel A L | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2012 Jun 20 | 8620-32 | 22723703 |
| Neural population dynamics during reaching. | Churchland, Mark M; Cunningham, John P; Kaufman, Matthew T; Foster, Justin D; Nuyujukian, Paul; Ryu, Stephen I; Shenoy, Krishna V | Nature | 2012 Jul 5 | 51-6 | 22722855 |
| Sequence dependence of transcription factor-mediated DNA looping. | Johnson, Stephanie; Linden, Martin; Phillips, Rob | Nucleic acids research | 2012 Sep | 7728-38 | 22718983 |
| Accelerated protein structure comparison using TM-score-GPU. | Hung, Ling-Hong; Samudrala, Ram | Bioinformatics (Oxford, England) | 2012 Aug 15 | 2191-2 | 22718788 |
| Talbot effect beyond the paraxial limit at optical frequencies. | Hua, Yi; Suh, Jae Yong; Zhou, Wei; Huntington, Mark D; Odom, Teri W | Optics express | 2012 Jun 18 | 14284-91 | 22714490 |
| Widely accessible method for superresolution fluorescence imaging of living systems. | Dedecker, Peter; Mo, Gary C H; Dertinger, Thomas; Zhang, Jin | Proceedings of the National Academy of Sciences of the United States of America | 2012 Jul 3 | 10909-14 | 22711840 |
| Small heat shock proteins in redox metabolism: implications for cardiovascular diseases. | Christians, Elisabeth S; Ishiwata, Takahiro; Benjamin, Ivor J | The international journal of biochemistry & cell biology | 2012 Oct | 1632-45 | 22710345 |
| Semiconductor nanowires: A platform for nanoscience and nanotechnology. | Lieber, Charles M | MRS bulletin / Materials Research Society | 2011 Dec 1 | 1052-1063 | 22707850 |
| Design, synthesis, and characterization of novel nanowire structures for photovoltaics and intracellular probes. | Tian, Bozhi; Lieber, Charles M | Pure and applied chemistry. Chimie pure et appliquee | 2011 Jan 1 | 2153-2169 | 22707797 |
| The effect of particle size on the biodistribution of low-modulus hydrogel PRINT particles. | Merkel, Timothy J; Chen, Kai; Jones, Stephen W; Pandya, Ashish A; Tian, Shaomin; Napier, Mary E; Zamboni, William E; DeDimone, Joseph M | Journal of controlled release : official journal of the Controlled Release Society | 2012 Aug 20 | 37-44 | 22705460 |
| New meta-analysis tools reveal common transcriptional regulatory basis for multiple determinants of behavior. | Ament, Seth A; Blatti, Charles A; Alaux, Cedric; Wheeler, Marsha M; Toth, Amy L; Le Conte, Yves; Hunt, Greg J; Guzman-Novoa, Ernesto; Degrandi-Hoffman, Gloria; Uribe-Rubio, Jose Luis; Amdam, Gro V; Page Jr, Robert E; Rodriguez-Zas, Sandra L; Robinson, Gen | Proceedings of the National Academy of Sciences of the United States of America | 2012 Jun 26 | E1801-10 | 22691501 |
| Cyclic caged morpholinos: conformationally gated probes of embryonic gene function. | Yamazoe, Sayumi; Shestopalov, Ilya A; Provost, Elayne; Leach, Steven D; Chen, James K | Angewandte Chemie (International ed. in English) | 2012 Jul 9 | 6908-11 | 22689470 |
| Highly efficient generation of heritable zebrafish gene mutations using homo- and heterodimeric TALENs. | Cade, Lindsay; Reyon, Deepak; Hwang, Woong Y; Tsai, Shengdar Q; Patel, Samir; Khayter, Cyd; Joung, J Keith; Sander, Jeffry D; Peterson, Randall T; Yeh, Jing-Ruey Joanna | Nucleic acids research | 2012 Sep | 8001-10 | 22684503 |
| In vivo veritas, in vitro artificia. | Matarese, Giuseppe; La Cava, Antonio; Horvath, Tamas L | Trends in molecular medicine | 2012 Aug | 439-42 | 22682514 |
| FoxO1 target Gpr17 activates AgRP neurons to regulate food intake. | Ren, Hongxia; Orozco, Ian J; Su, Ya; Suyama, Shigetomo; Gutierrez-Juarez, Roger; Horvath, Tamas L; Wardlaw, Sharon L; Plum, Leona; Arancio, Ottavio; Accili, Domenico | Cell | 2012 Jun 8 | 1314-26 | 22682251 |
| States of mind: emotions, body feelings, and thoughts share distributed neural networks. | Oosterwijk, Suzanne; Lindquist, Kristen A; Anderson, Eric; Dautoff, Rebecca; Moriguchi, Yoshiya; Barrett, Lisa Feldman | NeuroImage | 2012 Sep | 2110-28 | 22677148 |
| Generation of induced pluripotent stem cells from the prairie vole. | Manoli, Devanand S; Subramanyam, Deepa; Carey, Catriona; Sudin, Erik; Van Westerhuyzen, Julie A; Bales, Karen L; Blelloch, Robert; Shah, Nirao M | PloS one | 2012 | e38119 | 22675440 |
| Microbiota-targeted therapies: an ecological perspective. | Lemon, Katherine P; Armitage, Gary C; Relman, David A; Fischbach, Michael A | Science translational medicine | 2012 Jun 6 | 137rv5 | 22674555 |
| The application of ecological theory toward an understanding of the human microbiome. | Costello, Elizabeth K; Stagaman, Keaton; Dethlefsen, Les; Bohannan, Brendan J M; Relman, David A | Science (New York, N.Y.) | 2012 Jun 8 | 1255-62 | 22674335 |
| Specific inactivation of two immunomodulatory SIGLEC genes during human evolution. | Wang, Xiaoxia; Mitra, Nivedita; Secundino, Ismael; Banda, Kalyan; Cruz, Pedro; Padler-Karavani, Vered; Verhagen, Andrea; Reid, Chris; Lari, Martina; Rizzi, Ermanno; Balsamo, Carlotta; Corti, Giorgio; De Bellis, Gianluca; Longo, Laura; NISC Comparative Seq | Proceedings of the National Academy of Sciences of the United States of America | 2012 Jun 19 | 9935-40 | 22665810 |
| Improved somatic mutagenesis in zebrafish using transcription activator-like effector nucleases (TALENs). | Moore, Finola E; Reyon, Deepak; Sander, Jeffry D; Martinez, Sarah A; Blackburn, Jessica S; Khayter, Cyd; Ramirez, Cherie L; Joung, J Keith; Langenau, David M | PloS one | 2012 | e37877 | 22655075 |
| SIV replication in the infected rhesus macaque is limited by the size of the preexisting TH17 cell compartment. | Hartigan-O'Connor, Dennis J; Abel, Kristina; Van Rompay, Koen K A; Kanwar, Bittoo; McCune, Joseph M | Science translational medicine | 2012 May 30 | 136ra69 | 22649090 |
| Emotions are real. | Barrett, Lisa Feldman | Emotion (Washington, D.C.) | 2012 Jun | 413-29 | 22642358 |
| Antibiotic-induced bacterial cell death exhibits physiological and biochemical hallmarks of apoptosis. | Dwyer, Daniel J; Camacho, Diogo M; Kohanski, Michael A; Callura, Jarred M; Collins, James J | Molecular cell | 2012 Jun 8 | 561-72 | 22633370 |
| Brain-wide neuronal dynamics during motor adaptation in zebrafish. | Ahrens, Misha B; Li, Jennifer M; Orger, Michael B; Robson, Drew N; Schier, Alexander F; Engert, Florian; Portugues, Ruben | Nature | 2012 May 24 | 471-7 | 22622571 |
| The brain basis of emotion: a meta-analytic review. | Lindquist, Kristen A; Wager, Tor D; Kober, Hedy; Bliss-Moreau, Eliza; Barrett, Lisa Feldman | The Behavioral and brain sciences | 2012 Jun | 121-43 | 22617651 |
| Effect of aspect ratio and deformability on nanoparticle extravasation through nanopores. | Kersey, Farrell R; Merkel, Timothy J; Perry, Jillian L; Napier, Mary E; DeSimone, Joseph M | Langmuir : the ACS journal of surfaces and colloids | 2012 Jun 12 | 8773-81 | 22612428 |
| Targeting endoglin, an auxiliary transforming growth factor ýý coreceptor, to prevent fibrosis and heart failure. | Benjamin, Ivor J | Circulation | 2012 Jun 5 | 2689-91 | 22592899 |
| Single cell profiling of circulating tumor cells: transcriptional heterogeneity and diversity from breast cancer cell lines. | Powell, Ashley A; Talasaz, Amirali H; Zhang, Haiyu; Coram, Marc A; Reddy, Anupama; Deng, Glenn; Telli, Melinda L; Advani, Ranjana H; Carlson, Robert W; Mollick, Joseph A; Sheth, Shruti; Kurian, Allison W; Ford, James M; Stockdale, Frank E; Quake, Stephen | PloS one | 2012 | e33788 | 22586443 |
| Outside looking in: nanotube transistor intracellular sensors. | Gao, Ruixuan; Strehle, Steffen; Tian, Bozhi; Cohen-Karni, Tzahi; Xie, Ping; Duan, Xiaojie; Qing, Quan; Lieber, Charles M | Nano letters | 2012 Jun 13 | 3329-33 | 22583370 |
| Trends in ambulatory self-report: the role of momentary experience in psychosomatic medicine. | Conner, Tamlin S; Barrett, Lisa Feldman | Psychosomatic medicine | 2012 May | 327-37 | 22582330 |
| How cells process information: quantification of spatiotemporal signaling dynamics. | Ganesan, Ambhighainath; Zhang, Jin | Protein science : a publication of the Protein Society | 2012 Jul | 918-28 | 22573643 |
| Rendering protein-based particles transiently insoluble for therapeutic applications. | Xu, Jing; Wang, Jin; Luft, J Christopher; Tian, Shaomin; Owens Jr, Gary; Pandya, Ashish A; Berglund, Peter; Pohlhaus, Patrick; Maynor, Benjamin W; Smith, Jonathan; Hubby, Bolyn; Napier, Mary E; DeSimone, Joseph M | Journal of the American Chemical Society | 2012 May 30 | 8774-7 | 22568387 |
| The interaction between early life epilepsy and autistic-like behavioral consequences: a role for the mammalian target of rapamycin (mTOR) pathway. | Talos, Delia M; Sun, Hongyu; Zhou, Xiangping; Fitzgerald, Erin C; Jackson, Michele C; Klein, Peter M; Lan, Victor J; Joseph, Annelise; Jensen, Frances E | PloS one | 2012 | e35885 | 22567115 |
| Discovery of small molecules that bind to K-Ras and inhibit Sos-mediated activation. | Sun, Qi; Burke, Jason P; Phan, Jason; Burns, Michael C; Olejniczak, Edward T; Waterson, Alex G; Lee, Taekyu; Rossanese, Olivia W; Fesik, Stephen W | Angewandte Chemie (International ed. in English) | 2012 Jun 18 | 6140-3 | 22566140 |
| High throughput automated chromatin immunoprecipitation as a platform for drug screening and antibody validation. | Wu, Angela R; Kawahara, Tiara L A; Rapicavoli, Nicole A; van Riggelen, Jan; Shroff, Emelyn H; Xu, Liwen; Felsher, Dean W; Chang, Howard Y; Quake, Stephen R | Lab on a chip | 2012 Jun 21 | 2190-8 | 22566096 |
| Beyond homeostasis: a predictive-dynamic framework for understanding cellular behavior. | Freddolino, Peter L; Tavazoie, Saeed | Annual review of cell and developmental biology | 2012 | 363-84 | 22559263 |
| Incorporation and controlled release of silyl ether prodrugs from PRINT nanoparticles. | Parrott, Matthew C; Finniss, Mathew; Luft, J Chris; Pandya, Ashish; Gullapalli, Anuradha; Napier, Mary E; DeSimone, Joseph M | Journal of the American Chemical Society | 2012 May 9 | 7978-82 | 22545784 |
| Regional differences in susceptibility to hypoxic-ischemic injury in the preterm brain: exploring the spectrum from white matter loss to selective grey matter injury in a rat model. | Selip, D B; Jantzie, L L; Chang, M; Jackson, M C; Fitzgerald, E C; Boll, G; Murphy, A; Jensen, F E | Neurology research international | 2012 | 725184 | 22530125 |
| Culture environment-induced pluripotency of SACK-expanded tissue stem cells. | Pare, Jean-Francois; Sherley, James L | Journal of biomedicine & biotechnology | 2011 | 312457 | 22523467 |
| Oxidation of the guanine nucleotide pool underlies cell death by bactericidal antibiotics. | Foti, James J; Devadoss, Babho; Winkler, Jonathan A; Collins, James J; Walker, Graham C | Science (New York, N.Y.) | 2012 Apr 20 | 315-9 | 22517853 |
| Revisiting the role of the granuloma in tuberculosis. | Ramakrishnan, Lalita | Nature reviews. Immunology | 2012 May | 352-66 | 22517424 |
| FoldEco: a model for proteostasis in E. coli. | Powers, Evan T; Powers, David L; Gierasch, Lila M | Cell reports | 2012 Mar 29 | 265-76 | 22509487 |
| Out of sight but not out of mind: unseen affective faces influence evaluations and social impressions. | Anderson, Eric; Siegel, Erika; White, Dominique; Barrett, Lisa Feldman | Emotion (Washington, D.C.) | 2012 Dec | 1210-21 | 22506501 |
| Using gene expression noise to understand gene regulation. | Munsky, Brian; Neuert, Gregor; van Oudenaarden, Alexander | Science (New York, N.Y.) | 2012 Apr 13 | 183-7 | 22499939 |
| Systematic discovery of structural elements governing stability of mammalian messenger RNAs. | Goodarzi, Hani; Najafabadi, Hamed S; Oikonomou, Panos; Greco, Todd M; Fish, Lisa; Salavati, Reza; Cristea, Ileana M; Tavazoie, Saeed | Nature | 2012 May 10 | 264-8 | 22495308 |
| FLASH assembly of TALENs for high-throughput genome editing. | Reyon, Deepak; Tsai, Shengdar Q; Khayter, Cyd; Foden, Jennifer A; Sander, Jeffry D; Joung, J Keith | Nature biotechnology | 2012 May | 460-5 | 22484455 |
| Reductively responsive siRNA-conjugated hydrogel nanoparticles for gene silencing. | Dunn, Stuart S; Tian, Shaomin; Blake, Steven; Wang, Jin; Galloway, Ashley L; Murphy, Andrew; Pohlhaus, Patrick D; Rolland, Jason P; Napier, Mary E; DeSimone, Joseph M | Journal of the American Chemical Society | 2012 May 2 | 7423-30 | 22475061 |
| Six developmental trajectories characterize children with autism. | Fountain, Christine; Winter, Alix S; Bearman, Peter S | Pediatrics | 2012 May | e1112-20 | 22473372 |
| Synthetically encoded ultrashort-channel nanowire transistors for fast, pointlike cellular signal detection. | Cohen-Karni, Tzahi; Casanova, Didier; Cahoon, James F; Qing, Quan; Bell, David C; Lieber, Charles M | Nano letters | 2012 May 9 | 2639-44 | 22468846 |
| Perspectives on cell reprogramming with RNA. | Sul, Jai-Yoon; Kim, Tae Kyung; Lee, Jae Hee; Eberwine, James | Trends in biotechnology | 2012 May | 243-9 | 22459515 |
| Eye movements modulate the spatiotemporal dynamics of word processing. | Temereanca, Simona; Hamalainen, Matti S; Kuperberg, Gina R; Stufflebeam, Steve M; Halgren, Eric; Brown, Emery N | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2012 Mar 28 | 4482-94 | 22457496 |
| A unique regulatory phase of DNA methylation in the early mammalian embryo. | Smith, Zachary D; Chan, Michelle M; Mikkelsen, Tarjei S; Gu, Hongcang; Gnirke, Andreas; Regev, Aviv; Meissner, Alexander | Nature | 2012 Apr 19 | 339-44 | 22456710 |
| A conserved cell growth cycle can account for the environmental stress responses of divergent eukaryotes. | Slavov, Nikolai; Airoldi, Edoardo M; van Oudenaarden, Alexander; Botstein, David | Molecular biology of the cell | 2012 May | 1986-97 | 22456505 |
| Genetic switchboard for synthetic biology applications. | Callura, Jarred M; Cantor, Charles R; Collins, James J | Proceedings of the National Academy of Sciences of the United States of America | 2012 Apr 10 | 5850-5 | 22454498 |
| Altered inhibition in tuberous sclerosis and type IIb cortical dysplasia. | Talos, Delia M; Sun, Hongyu; Kosaras, Bela; Joseph, Annelise; Folkerth, Rebecca D; Poduri, Annapurna; Madsen, Joseph R; Black, Peter M; Jensen, Frances E | Annals of neurology | 2012 Apr | 539-51 | 22447678 |
| Active emergence from propofol general anesthesia is induced by methylphenidate. | Chemali, Jessica J; Van Dort, Christa J; Brown, Emery N; Solt, Ken | Anesthesiology | 2012 May | 998-1005 | 22446983 |
| Entropic tension in crowded membranes. | Linden, Martin; Sens, Pierre; Phillips, Rob | PLoS computational biology | 2012 | e1002431 | 22438801 |
| Single-cell sequencing provides clues about the host interactions of segmented filamentous bacteria (SFB). | Pamp, Sunje J; Harrington, Eoghan D; Quake, Stephen R; Relman, David A; Blainey, Paul C | Genome research | 2012 Jun | 1107-19 | 22434425 |
| A polished and reinforced thinned-skull window for long-term imaging of the mouse brain. | Shih, Andy Y; Mateo, Celine; Drew, Patrick J; Tsai, Philbert S; Kleinfeld, David | Journal of visualized experiments : JoVE | 2012 | 22433225 | |
| Report of the National Heart, Lung, and Blood Institute Working Group on epigenetics and hypertension. | Cowley Jr, Allen W; Nadeau, Joseph H; Baccarelli, Andrea; Berecek, Kathleen; Fornage, Myriam; Gibbons, Gary H; Harrison, David G; Liang, Mingyu; Nathanielsz, Peter W; O'Connor, Daniel T; Ordovas, Jose; Peng, Weiqun; Soares, Marcelo Bento; Szyf, Moshe; Tol | Hypertension | 2012 May | 899-905 | 22431584 |
| Single-cell census of mechanosensitive channels in living bacteria. | Bialecka-Fornal, Maja; Lee, Heun Jin; DeBerg, Hannah A; Gandhi, Chris S; Phillips, Rob | PloS one | 2012 | e33077 | 22427953 |
| A recurrent neural network for closed-loop intracortical brain-machine interface decoders. | Sussillo, David; Nuyujukian, Paul; Fan, Joline M; Kao, Jonathan C; Stavisky, Sergey D; Ryu, Stephen; Shenoy, Krishna | Journal of neural engineering | 2012 Apr | 026027 | 22427488 |
| Signaling-mediated bacterial persister formation. | Vega, Nicole M; Allison, Kyle R; Khalil, Ahmad S; Collins, James J | Nature chemical biology | 2012 May | 431-3 | 22426114 |
| Regulated noise in the epigenetic landscape of development and disease. | Pujadas, Elisabet; Feinberg, Andrew P | Cell | 2012 Mar 16 | 1123-31 | 22424224 |
| Direct observation of nanoparticle-cancer cell nucleus interactions. | Dam, Duncan Hieu M; Lee, Jung Heon; Sisco, Patrick N; Co, Dick T; Zhang, Ming; Wasielewski, Michael R; Odom, Teri W | ACS nano | 2012 Apr 24 | 3318-26 | 22424173 |
| DNA methylation dynamics, metabolic fluxes, gene splicing, and alternative phenotypes in honey bees. | Foret, Sylvain; Kucharski, Robert; Pellegrini, Matteo; Feng, Suhua; Jacobsen, Steven E; Robinson, Gene E; Maleszka, Ryszard | Proceedings of the National Academy of Sciences of the United States of America | 2012 Mar 27 | 4968-73 | 22416128 |
| State-space analysis of time-varying higher-order spike correlation for multiple neural spike train data. | Shimazaki, Hideaki; Amari, Shun-Ichi; Brown, Emery N; Grun, Sonja | PLoS computational biology | 2012 | e1002385 | 22412358 |
| Insights into the regulation of protein abundance from proteomic and transcriptomic analyses. | Vogel, Christine; Marcotte, Edward M | Nature reviews. Genetics | 2012 Apr | 227-32 | 22411467 |
| Molecular determinants of scouting behavior in honey bees. | Liang, Zhengzheng S; Nguyen, Trang; Mattila, Heather R; Rodriguez-Zas, Sandra L; Seeley, Thomas D; Robinson, Gene E | Science (New York, N.Y.) | 2012 Mar 9 | 1225-8 | 22403390 |
| Following the fate of one insulin-reactive CD4 T cell: conversion into Teffs and Tregs in the periphery controls diabetes in NOD mice. | Fousteri, Georgia; Jasinski, Jean; Dave, Amy; Nakayama, Maki; Pagni, Philippe; Lambolez, Florence; Juntti, Therese; Sarikonda, Ghanashyam; Cheng, Yang; Croft, Michael; Cheroutre, Hilde; Eisenbarth, George; von Herrath, Matthias | Diabetes | 2012 May | 1169-79 | 22403296 |
| The BAH domain of ORC1 links H4K20me2 to DNA replication licensing and Meier-Gorlin syndrome. | Kuo, Alex J; Song, Jikui; Cheung, Peggie; Ishibe-Murakami, Satoko; Yamazoe, Sayumi; Chen, James K; Patel, Dinshaw J; Gozani, Or | Nature | 2012 Apr 5 | 115-9 | 22398447 |
| Connecting Type 1 and Type 2 Diabetes through Innate Immunity. | Odegaard, Justin I; Chawla, Ajay | Cold Spring Harbor perspectives in medicine | 2012 Mar | a007724 | 22393536 |
| A functional variant in FCRL3 is associated with higher Fc receptor-like 3 expression on T cell subsets and rheumatoid arthritis disease activity. | Bajpai, Urmila D; Swainson, Louise A; Mold, Jeff E; Graf, Jonathan D; Imboden, John B; McCune, Joseph M | Arthritis and rheumatism | 2012 Aug | 2451-9 | 22392608 |
| Interaction of ýý-synuclein and a cell penetrating fusion peptide with higher eukaryotic cell membranes assessed by ýýýýýF NMR. | Zigoneanu, Imola G; Pielak, Gary J | Molecular pharmaceutics | 2012 Apr 2 | 1024-9 | 22376087 |
| A unified point process probabilistic framework to assess heartbeat dynamics and autonomic cardiovascular control. | Chen, Zhe; Purdon, Patrick L; Brown, Emery N; Barbieri, Riccardo | Frontiers in physiology. | 2012; | 22375120 | |
| Genetic reporter system for positioning of proteins at the bacterial pole. | Fixen, Kathryn R; Janakiraman, Anuradha; Garrity, Sean; Slade, Daniel J; Gray, Andrew N; Karahan, Nilay; Hochschild, Ann; Goldberg, Marcia B | mBio. | 2012; | 22375072 | |
| Engineered zinc finger nickases induce homology-directed repair with reduced mutagenic effects. | Ramirez, Cherie L; Certo, Michael T; Mussolino, Claudio; Goodwin, Mathew J; Cradick, Thomas J; McCaffrey, Anton P; Cathomen, Toni; Scharenberg, Andrew M; Joung, J Keith | Nucleic acids research | 2012 Jul | 5560-8 | 22373919 |
| Blood T-cell receptor diversity decreases during the course of HIV infection, but the potential for a diverse repertoire persists. | Baum, Paul D; Young, Jennifer J; Schmidt, Diane; Zhang, Qianjun; Hoh, Rebecca; Busch, Michael; Martin, Jeffrey; Deeks, Steven; McCune, Joseph M | Blood | 2012 Apr 12 | 3469-77 | 22371879 |
| Regulation of nuclear PKA revealed by spatiotemporal manipulation of cyclic AMP. | Sample, Vedangi; DiPilato, Lisa M; Yang, Jason H; Ni, Qiang; Saucerman, Jeffrey J; Zhang, Jin | Nature chemical biology | 2012 Apr | 375-82 | 22366721 |
| Gene delivery to the retina: from mouse to man. | Bennett, Jean; Chung, Daniel C; Maguire, Albert | Methods in enzymology | 2012 | 255-74 | 22365778 |
| Disease tolerance as a defense strategy. | Medzhitov, Ruslan; Schneider, David S; Soares, Miguel P | Science (New York, N.Y.) | 2012 Feb 24 | 936-41 | 22363001 |
| Dissociable large-scale networks anchored in the right anterior insula subserve affective experience and attention. | Touroutoglou, Alexandra; Hollenbeck, Mark; Dickerson, Bradford C; Feldman Barrett, Lisa | NeuroImage | 2012 May 1 | 1947-58 | 22361166 |
| MicroRNAs regulate B-cell receptor signaling-induced apoptosis. | Kluiver, J L; Chen, C-Z | Genes and immunity | 2012 Apr | 239-44 | 22357493 |
| Avian intervertebral disc arises from rostral sclerotome and lacks a nucleus pulposus: implications for evolution of the vertebrate disc. | Bruggeman, Bradley J; Maier, Jennifer A; Mohiuddin, Yasmin S; Powers, Rae; Lo, Yinting; Guimaraes-Camboa, Nuno; Evans, Sylvia M; Harfe, Brian D | Developmental dynamics : an official publication of the American Association of Anatomists | 2012 Apr | 675-83 | 22354863 |
| Point process time-frequency analysis of dynamic respiratory patterns during meditation practice. | Kodituwakku, Sandun; Lazar, Sara W; Indic, Premananda; Chen, Zhe; Brown, Emery N; Barbieri, Riccardo | Medical & biological engineering & computing | 2012 Mar | 261-75 | 22350435 |
| The membrane environment can promote or suppress bistability in cell signaling networks. | Abel, Steven M; Roose, Jeroen P; Groves, Jay T; Weiss, Arthur; Chakraborty, Arup K | The journal of physical chemistry. B. | 2012 Mar 22; | 22332778 | |
| High-side digitally current controlled biphasic bipolar microstimulator. | Hanson, Timothy L; Omarsson, Bjorn; O'Doherty, Joseph E; Peikon, Ian D; Lebedev, Mikhail A; Nicolelis, Miguel A L | IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society | 2012 May | 331-40 | 22328184 |
| A neurophysiological-metabolic model for burst suppression. | Ching, Shinung; Purdon, Patrick L; Vijayan, Sujith; Kopell, Nancy J; Brown, Emery N | Proceedings of the National Academy of Sciences of the United States of America | 2012 Feb 21 | 3095-100 | 22323592 |
| A role for cytomegalovirus-specific CD4+CX3CR1+ T cells and cytomegalovirus-induced T-cell immunopathology in HIV-associated atherosclerosis. | Sacre, Karim; Hunt, Peter W; Hsue, Priscilla Y; Maidji, Ekaterina; Martin, Jeffrey N; Deeks, Steven G; Autran, Brigitte; McCune, Joseph M | AIDS (London, England) | 2012 Apr 24 | 805-14 | 22313962 |
| Emotion words shape emotion percepts. | Gendron, Maria; Lindquist, Kristen A; Barsalou, Lawrence; Barrett, Lisa Feldman | Emotion (Washington, D.C.) | 2012 Apr | 314-25 | 22309717 |
| Kinked p-n junction nanowire probes for high spatial resolution sensing and intracellular recording. | Jiang, Zhe; Qing, Quan; Xie, Ping; Gao, Ruixuan; Lieber, Charles M | Nano letters | 2012 Mar 14 | 1711-6 | 22309132 |
| Uncovering spatial topology represented by rat hippocampal population neuronal codes. | Chen, Zhe; Kloosterman, Fabian; Brown, Emery N; Wilson, Matthew A | Journal of computational neuroscience | 2012 Oct | 227-55 | 22307459 |
| Loom-sensitive neurons link computation to action in the Drosophila visual system. | de Vries, Saskia E J; Clandinin, Thomas R | Current biology : CB | 2012 Mar 6 | 353-62 | 22305754 |
| Functional biases in visual cortex neurons with identified projections to higher cortical targets. | Jarosiewicz, Beata; Schummers, James; Malik, Wasim Q; Brown, Emery N; Sur, Mriganka | Current biology : CB | 2012 Feb 21 | 269-77 | 22305753 |
| Hematopoietic-stem-cell-based gene therapy for HIV disease. | Kiem, Hans-Peter; Jerome, Keith R; Deeks, Steven G; McCune, Joseph M | Cell stem cell | 2012 Feb 3 | 137-47 | 22305563 |
| Optimality in the development of intestinal crypts. | Itzkovitz, Shalev; Blat, Irene C; Jacks, Tyler; Clevers, Hans; van Oudenaarden, Alexander | Cell | 2012 Feb 3 | 608-19 | 22304925 |
| Modular genetic control of sexually dimorphic behaviors. | Xu, Xiaohong; Coats, Jennifer K; Yang, Cindy F; Wang, Amy; Ahmed, Osama M; Alvarado, Maricruz; Izumi, Tetsuro; Shah, Nirao M | Cell | 2012 Feb 3 | 596-607 | 22304924 |
| Host genotype-specific therapies can optimize the inflammatory response to mycobacterial infections. | Tobin, David M; Roca, Francisco J; Oh, Sungwhan F; McFarland, Ross; Vickery, Thad W; Ray, John P; Ko, Dennis C; Zou, Yuxia; Bang, Nguyen D; Chau, Tran T H; Vary, Jay C; Hawn, Thomas R; Dunstan, Sarah J; Farrar, Jeremy J; Thwaites, Guy E; King, Mary-Claire | Cell | 2012 Feb 3 | 434-46 | 22304914 |
| Using a low denaturant model to explore the conformational features of translocation-active SecA. | Maki, Jenny L; Krishnan, Beena; Gierasch, Lila M | Biochemistry. | 2012 Feb 21; | 1369-79 | 22304380 |
| Organization of vomeronasal sensory coding revealed by fast volumetric calcium imaging. | Turaga, Diwakar; Holy, Timothy E | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2012 Feb 1 | 1612-21 | 22302803 |
| Competing pathways control host resistance to virus via tRNA modification and programmed ribosomal frameshifting. | Maynard, Nathaniel D; Macklin, Derek N; Kirkegaard, Karla; Covert, Markus W | Molecular systems biology | 2012 | 567 | 22294093 |
| Two-photon microscopy as a tool to study blood flow and neurovascular coupling in the rodent brain. | Shih, Andy Y; Driscoll, Jonathan D; Drew, Patrick J; Nishimura, Nozomi; Schaffer, Chris B; Kleinfeld, David | Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism | 2012 Jul | 1277-309 | 22293983 |
| MetaMerge: scaling up genome-scale metabolic reconstructions with application to Mycobacterium tuberculosis. | Chindelevitch, Leonid; Stanley, Sarah; Hung, Deborah; Regev, Aviv; Berger, Bonnie | Genome biology | 2012 | r6 | 22292986 |
| Spatiotemporal resolution of the Ntla transcriptome in axial mesoderm development. | Shestopalov, Ilya A; Pitt, Cameron L W; Chen, James K | Nature chemical biology | 2012 Mar | 270-6 | 22286130 |
| Loss of autophagy in pro-opiomelanocortin neurons perturbs axon growth and causes metabolic dysregulation. | Coupe, Berengere; Ishii, Yuko; Dietrich, Marcelo O; Komatsu, Masaaki; Horvath, Tamas L; Bouret, Sebastien G | Cell metabolism | 2012 Feb 8 | 247-55 | 22285542 |
| A founder mutation in LEPRE1 carried by 1.5% of West Africans and 0.4% of African Americans causes lethal recessive osteogenesis imperfecta. | Cabral, Wayne A; Barnes, Aileen M; Adeyemo, Adebowale; Cushing, Kelly; Chitayat, David; Porter, Forbes D; Panny, Susan R; Gulamali-Majid, Fizza; Tishkoff, Sarah A; Rebbeck, Timothy R; Gueye, Serigne M; Bailey-Wilson, Joan E; Brody, Lawrence C; Rotimi, Cha | Genetics in medicine : official journal of the American College of Medical Genetics | 2012 May | 543-51 | 22281939 |
| Large-scale integration of nanoelectromechanical systems for gas sensing applications. | Bargatin, I; Myers, E B; Aldridge, J S; Marcoux, C; Brianceau, P; Duraffourg, L; Colinet, E; Hentz, S; Andreucci, P; Roukes, M L | Nano letters | 2012 Mar 14 | 1269-74 | 22280452 |
| Cortical correlates of fitts' law. | Ifft, Peter J; Lebedev, Mikhail A; Nicolelis, Miguel A L | Frontiers in integrative neuroscience | 2011 | 85 | 22275888 |
| Chronic in vivo imaging in the mouse spinal cord using an implanted chamber. | Farrar, Matthew J; Bernstein, Ida M; Schlafer, Donald H; Cleland, Thomas A; Fetcho, Joseph R; Schaffer, Chris B | Nature methods | 2012 Mar | 297-302 | 22266542 |
| Engineering nanomedicines using stimuli-responsive biomaterials. | Wang, Yapei; Byrne, James D; Napier, Mary E; DeSimone, Joseph M | Advanced drug delivery reviews | 2012 Aug | 1021-30 | 22266128 |
| Single-cell analysis reveals that noncoding RNAs contribute to clonal heterogeneity by modulating transcription factor recruitment. | Bumgarner, Stacie L; Neuert, Gregor; Voight, Benjamin F; Symbor-Nagrabska, Anna; Grisafi, Paula; van Oudenaarden, Alexander; Fink, Gerald R | Molecular cell | 2012 Feb 24 | 470-82 | 22264825 |
| Instantaneous assessment of autonomic cardiovascular control during general anesthesia. | Chen, Zhe; Citi, Luca; Purdon, Patrick L; Brown, Emery N; Barbieri, Riccardo | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2011 | 8444-7 | 22256307 |
| Robust time-varying multivariate coherence estimation: application to electroencephalogram recordings during general anesthesia. | Wong, Kin Foon Kevin; Mukamel, Eran A; Salazar, Andres Felipe; Pierce, Eric T; Harrell, P Grace; Walsh, John L; Sampson, Aaron; Brown, Emery N; Purdon, Patrick L | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2011 | 4725-8 | 22255393 |
| Bayesian analysis of trinomial data in behavioral experiments and its application to human studies of general anesthesia. | Wong, Kin Foon Kevin; Smith, Anne C; Pierce, Eric T; Harrell, P Grace; Walsh, John L; Salazar, Andres Felipe; Tavares, Casie L; Cimenser, Aylin; Prerau, Michael J; Mukamel, Eran A; Sampson, Aaron; Purdon, Patrick L; Brown, Emery N | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2011 | 4705-8 | 22255388 |
| Assessing neuronal interactions of cell assemblies during general anesthesia. | Chen, Zhe; Vijayan, Sujith; Ching, ShiNung; Hale, Greg; Flores, Francisco J; Wilson, Matthew A; Brown, Emery N | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2011 | 4175-8 | 22255259 |
| Modeling two-photon calcium fluorescence of episodic V1 recordings using multifrequency analysis. | Zheng, Henry W; Malik, Wasim Q; Runyan, Caroline A; Sur, Mriganka; Brown, Emery N | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2011 | 3016-9 | 22254975 |
| Point-process analysis of neural spiking activity of muscle spindles recorded from thin-film longitudinal intrafascicular electrodes. | Citi, Luca; Djilas, Milan; Azevedo-Coste, Christine; Yoshida, Ken; Brown, Emery N; Barbieri, Riccardo | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2011 | 2311-4 | 22254803 |
| Phase-based measures of cross-frequency coupling in brain electrical dynamics under general anesthesia. | Mukamel, Eran A; Wong, Kin Foon; Prerau, Michael J; Brown, Emery N; Purdon, Patrick L | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2011 | 1981-4 | 22254722 |
| Correcting for serial dependence in studies of respiratory dynamics. | Gong, Jen J; Wong, Kin Foon Kevin; Cotten, Joseph F; Solt, Ken; Brown, Emery N | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2011 | 1721-4 | 22254658 |
| A state-space model of the burst suppression ratio. | Chemali, Jessica J; Wong, K F Kevin; Solt, Ken; Brown, Emery N | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2011 | 1431-4 | 22254587 |
| Monkey models for brain-machine interfaces: the need for maintaining diversity. | Nuyujukian, Paul; Fan, Joline M; Gilja, Vikash; Kalanithi, Paul S; Chestek, Cindy A; Shenoy, Krishna V | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2011 | 1301-5 | 22254555 |
| Cohort effects explain the increase in autism diagnosis among children born from 1992 to 2003 in California. | Keyes, Katherine M; Susser, Ezra; Cheslack-Postava, Keely; Fountain, Christine; Liu, Kayuet; Bearman, Peter S | International journal of epidemiology | 2012 Apr | 495-503 | 22253308 |
| Affective state influences perception by affecting decision parameters underlying bias and sensitivity. | Lynn, Spencer K; Zhang, Xuan; Barrett, Lisa Feldman | Emotion (Washington, D.C.) | 2012 Aug | 726-36 | 22251054 |
| What limits the efficiency of double-strand break-dependent stress-induced mutation in Escherichia coli? | Shee, Chandan; Ponder, Rebecca; Gibson, Janet L; Rosenberg, Susan M | Journal of molecular microbiology and biotechnology | 2011 | 8-19 | 22248539 |
| Controlling airborne cues to study small animal navigation. | Gershow, Marc; Berck, Matthew; Mathew, Dennis; Luo, Linjiao; Kane, Elizabeth A; Carlson, John R; Samuel, Aravinthan D T | Nature methods. | 2012 Mar; | 290-6 | 22245808 |
| A reliable protocol for the manual segmentation of the human amygdala and its subregions using ultra-high resolution MRI. | Entis, Jonathan J; Doerga, Priya; Barrett, Lisa Feldman; Dickerson, Bradford C | NeuroImage | 2012 Apr 2 | 1226-35 | 22245260 |
| The Caenorhabditis elegans synthetic multivulva genes prevent ras pathway activation by tightly repressing global ectopic expression of lin-3 EGF. | Saffer, Adam M; Kim, Dong Hyun; van Oudenaarden, Alexander; Horvitz, H Robert | PLoS genetics | 2011 Dec | e1002418 | 22242000 |
| Balancing repair and tolerance of DNA damage caused by alkylating agents. | Fu, Dragony; Calvo, Jennifer A; Samson, Leona D | Nature reviews. Cancer | 2012 Feb | 104-20 | 22237395 |
| Modifying the pores of an inverse opal scaffold with chitosan microstructures for truly three-dimensional cell culture. | Zhang, Yu; Choi, Sung-Wook; Xia, Younan | Macromolecular rapid communications | 2012 Feb 27 | 296-301 | 22231861 |
| Vertical nanowire electrode arrays as a scalable platform for intracellular interfacing to neuronal circuits. | Robinson, Jacob T; Jorgolli, Marsela; Shalek, Alex K; Yoon, Myung-Han; Gertner, Rona S; Park, Hongkun | Nature nanotechnology | 2012 Mar | 180-4 | 22231664 |
| Tolerance of infections. | Ayres, Janelle S; Schneider, David S | Annual review of immunology | 2012 | 271-94 | 22224770 |
| Virtual active touch using randomly patterned intracortical microstimulation. | O'Doherty, Joseph E; Lebedev, Mikhail A; Li, Zheng; Nicolelis, Miguel A L | IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society | 2012 Jan | 85-93 | 22207642 |
| Quantitative analysis of the role played by poly(vinylpyrrolidone) in seed-mediated growth of Ag nanocrystals. | Xia, Xiaohu; Zeng, Jie; Oetjen, L Kyle; Li, Qingge; Xia, Younan | Journal of the American Chemical Society | 2012 Jan 25 | 1793-801 | 22206387 |
| Glutathione-dependent reductive stress triggers mitochondrial oxidation and cytotoxicity. | Zhang, Huali; Limphong, Pattraranee; Pieper, Joel; Liu, Qiang; Rodesch, Christopher K; Christians, Elisabeth; Benjamin, Ivor J | FASEB journal : official publication of the Federation of American Societies for Experimental Biology | 2012 Apr | 1442-51 | 22202674 |
| Obesity is associated with hypothalamic injury in rodents and humans. | Thaler, Joshua P; Yi, Chun-Xia; Schur, Ellen A; Guyenet, Stephan J; Hwang, Bang H; Dietrich, Marcelo O; Zhao, Xiaolin; Sarruf, David A; Izgur, Vitaly; Maravilla, Kenneth R; Nguyen, Hong T; Fischer, Jonathan D; Matsen, Miles E; Wisse, Brent E; Morton, Greg | The Journal of clinical investigation | 2012 Jan 3 | 153-62 | 22201683 |
| A high-throughput fluorescence polarization anisotropy assay for the 70N domain of replication protein A. | Souza-Fagundes, Elaine M; Frank, Andreas O; Feldkamp, Michael D; Dorset, Daniel C; Chazin, Walter J; Rossanese, Olivia W; Olejniczak, Edward T; Fesik, Stephen W | Analytical biochemistry | 2012 Feb 15 | 742-9 | 22197419 |
| Combinatorial patterning of chromatin regulators uncovered by genome-wide location analysis in human cells. | Ram, Oren; Goren, Alon; Amit, Ido; Shoresh, Noam; Yosef, Nir; Ernst, Jason; Kellis, Manolis; Gymrek, Melissa; Issner, Robbyn; Coyne, Michael; Durham, Timothy; Zhang, Xiaolan; Donaghey, Julie; Epstein, Charles B; Regev, Aviv; Bernstein, Bradley E | Cell | 2011 Dec 23 | 1628-39 | 22196736 |
| A high-resolution whole-genome map of key chromatin modifications in the adult Drosophila melanogaster. | Yin, Hang; Sweeney, Sarah; Raha, Debasish; Snyder, Michael; Lin, Haifan | PLoS genetics | 2011 Dec | e1002380 | 22194694 |
| CPG15 regulates synapse stability in the developing and adult brain. | Fujino, Tadahiro; Leslie, Jennifer H; Eavri, Ronen; Chen, Jerry L; Lin, Walter C; Flanders, Genevieve H; Borok, Erzsebet; Horvath, Tamas L; Nedivi, Elly | Genes & development | 2011 Dec 15 | 2674-85 | 22190461 |
| Broad range of neural dynamics from a time-varying FitzHugh-Nagumo model and its spiking threshold estimation. | Faghih, Rose T; Savla, Ketan; Dahleh, Munther A; Brown, Emery N | IEEE transactions on bio-medical engineering | 2012 Mar | 816-23 | 22186931 |
| Accurate proteome-wide protein quantification from high-resolution 15N mass spectra. | Khan, Zia; Amini, Sasan; Bloom, Joshua S; Ruse, Cristian; Caudy, Amy A; Kruglyak, Leonid; Singh, Mona; Perlman, David H; Tavazoie, Saeed | Genome biology | 2011 | R122 | 22182234 |
| An Electrochemical Approach to and the Physical Consequences of Preparing Nanostructures from Gold Nanorods with Smooth Ends. | Banholzer, Matthew J; Li, Shuzhou; Ketter, Jacob B; Rozkiewicz, Dorota I; Schatz, George C; Mirkin, Chad A | The journal of physical chemistry. C, Nanomaterials and interfaces. | 2008 Oct 9; | 15729-15734 | 22180788 |
| Pyrene-Appended Fluorescent Tweezers Generated via the Weak-Link Approach and Their Halide Recognition Properties. | Jeon, You-Moon; Kim, Dongwoo; Mirkin, Chad A; Golen, James A; Rheingold, Arnold L | Tetrahedron | 2008 Sep 1 | 8428-8434 | 22180669 |
| Intracellular recordings of action potentials by an extracellular nanoscale field-effect transistor. | Duan, Xiaojie; Gao, Ruixuan; Xie, Ping; Cohen-Karni, Tzahi; Qing, Quan; Choe, Hwan Sung; Tian, Bozhi; Jiang, Xiaocheng; Lieber, Charles M | Nature nanotechnology | 2012 Mar | 174-9 | 22179566 |
| Genetic dissection reveals two separate retinal substrates for polarization vision in Drosophila. | Wernet, Mathias F; Velez, Mariel M; Clark, Damon A; Baumann-Klausener, Franziska; Brown, Julian R; Klovstad, Martha; Labhart, Thomas; Clandinin, Thomas R | Current biology : CB | 2012 Jan 10 | 12-20 | 22177904 |
| Comparisons of distance methods for combining covariates and abundances in microbiome studies. | Fukuyama, Julia; McMurdie, Paul J; Dethlefsen, Les; Relman, David A; Holmes, Susan | Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. | 2012; | 213-24 | 22174277 |
| Microbial environments confound antibiotic efficacy. | Lee, Henry H; Collins, James J | Nature chemical biology | 2012 Jan | 6-9 | 22173343 |
| Hypoxia-induced neonatal seizures diminish silent synapses and long-term potentiation in hippocampal CA1 neurons. | Zhou, Chengwen; Lippman, Jocelyn J Bell; Sun, Hongyu; Jensen, Frances E | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2011 Dec 14 | 18211-22 | 22171027 |
| Developmental regulation of group I metabotropic glutamate receptors in the premature brain and their protective role in a rodent model of periventricular leukomalacia. | Jantzie, Lauren L; Talos, Delia M; Selip, Debra B; An, Li; Jackson, Michele C; Folkerth, Rebecca D; Deng, Wenbin; Jensen, Frances E | Neuron glia biology | 2010 Nov | 277-88 | 22169210 |
| Delivery of multiple siRNAs using lipid-coated PLGA nanoparticles for treatment of prostate cancer. | Hasan, Warefta; Chu, Kevin; Gullapalli, Anuradha; Dunn, Stuart S; Enlow, Elizabeth M; Luft, J Christopher; Tian, Shaomin; Napier, Mary E; Pohlhaus, Patrick D; Rolland, Jason P; DeSimone, Joseph M | Nano letters | 2012 Jan 11 | 287-92 | 22165988 |
| Thymosin beta 4 is dispensable for murine cardiac development and function. | Banerjee, Indroneal; Zhang, Jianlin; Moore-Morris, Thomas; Lange, Stephan; Shen, Tao; Dalton, Nancy D; Gu, Yusu; Peterson, Kirk L; Evans, Sylvia M; Chen, Ju | Circulation research | 2012 Feb 3 | 456-64 | 22158707 |
| Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome. | Pride, David T; Salzman, Julia; Haynes, Matthew; Rohwer, Forest; Davis-Long, Clara; White 3rd, Richard A; Loomer, Peter; Armitage, Gary C; Relman, David A | The ISME journal | 2012 May | 915-26 | 22158393 |
| Genomic rearrangement in three dimensions. | Hastings, P J; Rosenberg, Susan M | Nature biotechnology | 2011 Dec | 1096-8 | 22158363 |
| Local electrical potential detection of DNA by nanowire-nanopore sensors. | Xie, Ping; Xiong, Qihua; Fang, Ying; Qing, Quan; Lieber, Charles M | Nature nanotechnology | 2012 Feb | 119-25 | 22157724 |
| Protein kinase C ýý is required for T cell activation and homeostatic proliferation. | Fu, Guo; Hu, Jianfang; Niederberger-Magnenat, Nathalie; Rybakin, Vasily; Casas, Javier; Yachi, Pia P; Feldstein, Stephanie; Ma, Bo; Hoerter, John A H; Ampudia, Jeanette; Rigaud, Stephanie; Lambolez, Florence; Gavin, Amanda L; Sauer, Karsten; Cheroutre, Hi | Science signaling | 2011 | ra84 | 22155788 |
| Interaction of *-synuclein with vesicles that mimic mitochondrial membranes. | Zigoneanu, Imola G; Yang, Yoo Jeong; Krois, Alexander S; Haque, Emdadul; Pielak, Gary J | Biochimica et biophysica acta | 2012 Mar | 512-9 | 22155643 |
| A spatiotemporal dynamic distributed solution to the MEG inverse problem. | Lamus, Camilo; Hamalainen, Matti S; Temereanca, Simona; Brown, Emery N; Purdon, Patrick L | NeuroImage | 2011 Nov 30 | 22155043 | |
| Katanin contributes to interspecies spindle length scaling in Xenopus. | Loughlin, Rose; Wilbur, Jeremy D; McNally, Francis J; Nedelec, Francois J; Heald, Rebecca | Cell | 2011 Dec 9 | 1397-407 | 22153081 |
| Extraordinary nonlinear absorption in 3D bowtie nanoantennas. | Suh, Jae Yong; Huntington, Mark D; Kim, Chul Hoon; Zhou, Wei; Wasielewski, Michael R; Odom, Teri W | Nano letters | 2012 Jan 11 | 269-74 | 22149352 |
| Quantifying the coverage density of poly(ethylene glycol) chains on the surface of gold nanostructures. | Xia, Xiaohu; Yang, Miaoxin; Wang, Yucai; Zheng, Yiqun; Li, Qingge; Chen, Jingyi; Xia, Younan | ACS nano | 2012 Jan 24 | 512-22 | 22148912 |
| Loop nucleotides control primary and mature miRNA function in target recognition and repression. | Yue, Si-Biao; Trujillo, Robin Deis; Tang, Yujie; O'Gorman, William E; Chen, Chang-Zheng | RNA biology | 2011 Nov-Dec | 1115-23 | 22142974 |
| Evolution of functionally diverse alleles associated with PTC bitter taste sensitivity in Africa. | Campbell, Michael C; Ranciaro, Alessia; Froment, Alain; Hirbo, Jibril; Omar, Sabah; Bodo, Jean-Marie; Nyambo, Thomas; Lema, Godfrey; Zinshteyn, Daniel; Drayna, Dennis; Breslin, Paul A S; Tishkoff, Sarah A | Molecular biology and evolution | 2012 Apr | 1141-53 | 22130969 |
| Haplotype variation and genotype imputation in African populations. | Huang, Lucy; Jakobsson, Mattias; Pemberton, Trevor J; Ibrahim, Muntaser; Nyambo, Thomas; Omar, Sabah; Pritchard, Jonathan K; Tishkoff, Sarah A; Rosenberg, Noah A | Genetic epidemiology | 2011 Dec | 766-80 | 22125220 |
| Transgenerational genetic effects. | Nelson, Vicki R; Nadeau, Joseph H | Epigenomics | 2010 Dec | 797-806 | 22122083 |
| Transgenerational genetic effects of the paternal Y chromosome on daughters' phenotypes. | Nelson, Vicki R; Spiezio, Sabrina H; Nadeau, Joseph H | Epigenomics. | 2010 Aug; | 513-21 | 22121971 |
| Decoding cell lineage from acquired mutations using arbitrary deep sequencing. | Carlson, Cheryl A; Kas, Arnold; Kirkwood, Robert; Hays, Laura E; Preston, Bradley D; Salipante, Stephen J; Horwitz, Marshall S | Nature methods | 2012 Jan | 78-80 | 22120468 |
| Using iPSC-derived neurons to uncover cellular phenotypes associated with Timothy syndrome. | Pasca, Sergiu P; Portmann, Thomas; Voineagu, Irina; Yazawa, Masayuki; Shcheglovitov, Aleksandr; Pasca, Anca M; Cord, Branden; Palmer, Theo D; Chikahisa, Sachiko; Nishino, Seiji; Bernstein, Jonathan A; Hallmayer, Joachim; Geschwind, Daniel H; Dolmetsch, Ricardo E | Nature medicine. | 2011 Dec; | 1657-62 | 22120178 |
| Single-molecule transcript counting of stem-cell markers in the mouse intestine. | Itzkovitz, Shalev; Lyubimova, Anna; Blat, Irene C; Maynard, Mindy; van Es, Johan; Lees, Jacqueline; Jacks, Tyler; Clevers, Hans; van Oudenaarden, Alexander | Nature cell biology | 2012 Jan | 106-14 | 22119784 |
| SV119-gold nanocage conjugates: a new platform for targeting cancer cells via sigma-2 receptors. | Wang, Yucai; Xu, Jinbin; Xia, Xiaohu; Yang, Miaoxin; Vangveravong, Suwanna; Chen, Jingyi; Mach, Robert H; Xia, Younan | Nanoscale | 2012 Jan 21 | 421-4 | 22113350 |
| Interaction of streptavidin-based peptide-MHC oligomers (tetramers) with cell-surface TCRs. | Stone, Jennifer D; Artyomov, Maxim N; Chervin, Adam S; Chakraborty, Arup K; Eisen, Herman N; Kranz, David M | Journal of immunology (Baltimore, Md. : 1950). | 2011 Dec 15; | 6281-90 | 22102724 |
| Synthesis of monolithic graphene-graphite integrated electronics. | Park, Jang-Ung; Nam, SungWoo; Lee, Mi-Sun; Lieber, Charles M | Nature materials | 2012 Feb | 120-5 | 22101813 |
| Alternatively activated macrophages produce catecholamines to sustain adaptive thermogenesis. | Nguyen, Khoa D; Qiu, Yifu; Cui, Xiaojin; Goh, Y P Sharon; Mwangi, Julia; David, Tovo; Mukundan, Lata; Brombacher, Frank; Locksley, Richard M; Chawla, Ajay | Nature | 2011 Dec 1 | 104-8 | 22101429 |
| Strategies to discover regulatory circuits of the mammalian immune system. | Amit, Ido; Regev, Aviv; Hacohen, Nir | Nature reviews. Immunology | 2011 Dec | 873-80 | 22094988 |
| Confinement of gene drive systems to local populations: a comparative analysis. | Marshall, John M; Hay, Bruce A | Journal of theoretical biology | 2012 Feb 7 | 153-71 | 22094363 |
| Prospect for feedback guided surgery with ultra-short pulsed laser light. | Jeong, Diana C; Tsai, Philbert S; Kleinfeld, David | Current opinion in neurobiology | 2012 Feb | 24-33 | 22088392 |
| STATE-SPACE SOLUTIONS TO THE DYNAMIC MAGNETOENCEPHALOGRAPHY INVERSE PROBLEM USING HIGH PERFORMANCE COMPUTING. | Long, Christopher J; Purdon, Patrick L; Temereanca, Simona; Desai, Neil U; Hamalainen, Matti S; Brown, Emery N | The annals of applied statistics | 2011 Jun 1 | 1207-1228 | 22081780 |
| Systematic discovery of TLR signaling components delineates viral-sensing circuits. | Chevrier, Nicolas; Mertins, Philipp; Artyomov, Maxim N; Shalek, Alex K; Iannacone, Matteo; Ciaccio, Mark F; Gat-Viks, Irit; Tonti, Elena; DeGrace, Marciela M; Clauser, Karl R; Garber, Manuel; Eisenhaure, Thomas M; Yosef, Nir; Robinson, Jacob; Sutton, Amy; | Cell | 2011 Nov 11 | 853-67 | 22078882 |
| Large-scale automated histology in the pursuit of connectomes. | Kleinfeld, David; Bharioke, Arjun; Blinder, Pablo; Bock, Davi D; Briggman, Kevin L; Chklovskii, Dmitri B; Denk, Winfried; Helmstaedter, Moritz; Kaufhold, John P; Lee, Wei-Chung Allen; Meyer, Hanno S; Micheva, Kristina D; Oberlaender, Marcel; Prohaska, Ste | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2011 Nov 9 | 16125-38 | 22072665 |
| Mitotic chromosome size scaling in Xenopus. | Kieserman, Esther K; Heald, Rebecca | Cell cycle (Georgetown, Tex.) | 2011 Nov 15 | 3863-70 | 22071695 |
| Zebrafish neurobiology: from development to circuit function and behaviour. | Engert, Florian; Wilson, Stephen W | Developmental neurobiology. | 2012 Mar; | 22058058 | |
| Sustained axon regeneration induced by co-deletion of PTEN and SOCS3. | Sun, Fang; Park, Kevin K; Belin, Stephane; Wang, Dongqing; Lu, Tao; Chen, Gang; Zhang, Kang; Yeung, Cecil; Feng, Guoping; Yankner, Bruce A; He, Zhigang | Nature | 2011 Dec 15 | 372-5 | 22056987 |
| In vivo quantitative evaluation of the transport kinetics of gold nanocages in a lymphatic system by noninvasive photoacoustic tomography. | Cai, Xin; Li, Weiyang; Kim, Chul-Hong; Yuan, Yuchen; Wang, Lihong V; Xia, Younan | ACS nano | 2011 Dec 27 | 9658-67 | 22054348 |
| Variations in the heme oxygenase-1 microsatellite polymorphism are associated with plasma CD14 and viral load in HIV-infected African-Americans. | Seu, L; Burt, T D; Witte, J S; Martin, J N; Deeks, S G; McCune, J M | Genes and immunity | 2012 Apr | 258-67 | 22048453 |
| Fitness landscape of antibiotic tolerance in Pseudomonas aeruginosa biofilms. | Amini, Sasan; Hottes, Alison K; Smith, Lincoln E; Tavazoie, Saeed | PLoS pathogens | 2011 Oct | e1002298 | 22028649 |
| Gold nanocages as contrast agents for photoacoustic imaging. | Li, Weiyang; Brown, Paige K; Wang, Lihong V; Xia, Younan | Contrast media & molecular imaging | 2011 Sep-Oct | 370-7 | 22025337 |
| Motor cortical networks for skilled movements have dynamic properties that are related to accurate reaching. | Putrino, David F; Chen, Zhe; Ghosh, Soumya; Brown, Emery N | Neural plasticity | 2011 | 413543 | 22007332 |
| Proteostasis and REDOX state in the heart. | Christians, Elisabeth S; Benjamin, Ivor J | American journal of physiology. Heart and circulatory physiology | 2012 Jan 1 | H24-37 | 22003057 |
| Multiplexed quantification of nucleic acids with large dynamic range using multivolume digital RT-PCR on a rotational SlipChip tested with HIV and hepatitis C viral load. | Shen, Feng; Sun, Bing; Kreutz, Jason E; Davydova, Elena K; Du, Wenbin; Reddy, Poluru L; Joseph, Loren J; Ismagilov, Rustem F | Journal of the American Chemical Society | 2011 Nov 9 | 17705-12 | 21995644 |
| Characterization of genetic variation and natural selection at the arylamine N-acetyltransferase genes in global human populations. | Mortensen, Holly M; Froment, Alain; Lema, Godfrey; Bodo, Jean-Marie; Ibrahim, Muntaser; Nyambo, Thomas B; Omar, Sabah A; Tishkoff, Sarah A | Pharmacogenomics | 2011 Nov | 1545-58 | 21995608 |
| Engineering designer nucleases with customized cleavage specificities. | Sander, Jeffry D; Maeder, Morgan L; Joung, J Keith | Current protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.] | 2011 Oct | Unit12.13 | 21987054 |
| Macrophage-mediated inflammation in metabolic disease. | Chawla, Ajay; Nguyen, Khoa D; Goh, Y P Sharon | Nature reviews. Immunology | 2011 Nov | 738-49 | 21984069 |
| Theoretical design and analysis of multivolume digital assays with wide dynamic range validated experimentally with microfluidic digital PCR. | Kreutz, Jason E; Munson, Todd; Huynh, Toan; Shen, Feng; Du, Wenbin; Ismagilov, Rustem F | Analytical chemistry | 2011 Nov 1 | 8158-68 | 21981344 |
| The effect of noise correlations in populations of diversely tuned neurons. | Ecker, Alexander S; Berens, Philipp; Tolias, Andreas S; Bethge, Matthias | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2011 Oct 05; | 21976512 | |
| Active tactile exploration using a brain-machine-brain interface. | O'Doherty, Joseph E; Lebedev, Mikhail A; Ifft, Peter J; Zhuang, Katie Z; Shokur, Solaiman; Bleuler, Hannes; Nicolelis, Miguel A L | Nature | 2011 Nov 10 | 228-31 | 21976021 |
| Early postmyocardial infarction survival in Murphy Roths Large mice is mediated by attenuated apoptosis and inflammation but depends on genetic background. | Hunt, Darlene L; Campbell, Patrick H; Zambon, Alexander C; Vranizan, Karen; Evans, |