Publications Search by Program
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The search results on this publication page are automated on a monthly schedule based on acknowledgement of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.
NIH Director's Pioneer Award Program (2277)
| Publication Title | Authors | Journal | Publication Date | Page No | PubMedID |
|---|---|---|---|---|---|
| Neuronal Stimulation Triggers Neuronal Glycolysis and Not Lactate Uptake. | Díaz-García, Carlos Manlio; Mongeon, Rebecca; Lahmann, Carolina; Koveal, Dorothy; Zucker, Hannah; Yellen, Gary | Cell metabolism. | 2017 Aug 01; | 28768175 | |
| Targeted DNA methylation in human cells using engineered dCas9-methyltransferases. | Xiong, Tina; Meister, Glenna E; Workman, Rachael E; Kato, Nathaniel C; Spellberg, Michael J; Turker, Fulya; Timp, Winston; Ostermeier, Marc; Novina, Carl D | Scientific reports. | 2017 Jul 27; | 28751638 | |
| Gene expression signatures of human cell and tissue longevity. | Seim, Inge; Ma, Siming; Gladyshev, Vadim N | NPJ aging and mechanisms of disease. | 2016; | 28721269 | |
| Nanoscale imaging of clinical specimens using pathology-optimized expansion microscopy. | Zhao, Yongxin; Bucur, Octavian; Irshad, Humayun; Chen, Fei; Weins, Astrid; Stancu, Andreea L; Oh, Eun-Young; DiStasio, Marcello; Torous, Vanda; Glass, Benjamin; Stillman, Isaac E; Schnitt, Stuart J; Beck, Andrew H; Boyden, Edward S | Nature biotechnology. | 2017 Aug; | 28714966 | |
| Neural Circuit-Specialized Astrocytes: Transcriptomic, Proteomic, Morphological, and Functional Evidence. | Chai, Hua; Diaz-Castro, Blanca; Shigetomi, Eiji; Monte, Emma; Octeau, J Christopher; Yu, Xinzhu; Cohn, Whitaker; Rajendran, Pradeep S; Vondriska, Thomas M; Whitelegge, Julian P; Coppola, Giovanni; Khakh, Baljit S | Neuron. | 2017 Jul 11; | 28712653 | |
| CRISPR/Cas9-Mediated Scanning for Regulatory Elements Required for HPRT1 Expression via Thousands of Large, Programmed Genomic Deletions. | Gasperini, Molly; Findlay, Gregory M; McKenna, Aaron; Milbank, Jennifer H; Lee, Choli; Zhang, Melissa D; Cusanovich, Darren A; Shendure, Jay | American journal of human genetics. | 2017 Aug 03; | 28712454 | |
| Quantitative real-time imaging of glutathione. | Jiang, Xiqian; Chen, Jianwei; Baji?, Aleksandar; Zhang, Chengwei; Song, Xianzhou; Carroll, Shaina L; Cai, Zhao-Lin; Tang, Meiling; Xue, Mingshan; Cheng, Ninghui; Schaaf, Christian P; Li, Feng; MacKenzie, Kevin R; Ferreon, Allan Chris M; Xia, Fan; Wang, Me | Nature communications. | 2017 Jul 13; | 28703127 | |
| Imaging-Based Simulations for Predicting Sudden Death and Guiding Ventricular Tachycardia Ablation. | Trayanova, Natalia A; Pashakhanloo, Farhad; Wu, Katherine C; Halperin, Henry R | Circulation. Arrhythmia and electrophysiology. | 2017 Jul; | 28696219 | |
| Reversible Product Release and Recapture by a Fungal Polyketide Synthase Using a Carnitine Acyltransferase Domain. | Hang, Leibniz; Tang, Man-Cheng; Harvey, Colin J B; Page, Claire G; Li, Jian; Hung, Yiu-Sun; Liu, Nicholas; Hillenmeyer, Maureen E; Tang, Yi | Angewandte Chemie (International ed. in English). | 2017 Aug 01; | 28679030 | |
| Systematic bacterialization of yeast genes identifies a near-universally swappable pathway. | Kachroo, Aashiq H; Laurent, Jon M; Akhmetov, Azat; Szilagyi-Jones, Madelyn; McWhite, Claire D; Zhao, Alice; Marcotte, Edward M | eLife. | 2017 Jun 29; | 28661399 | |
| Reliable and Elastic Propagation of Cortical Seizures In Vivo. | Wenzel, Michael; Hamm, Jordan P; Peterka, Darcy S; Yuste, Rafael | Cell reports. | 2017 Jun 27; | 28658617 | |
| Metabolite Measurement: Pitfalls to Avoid and Practices to Follow. | Lu, Wenyun; Su, Xiaoyang; Klein, Matthias S; Lewis, Ian A; Fiehn, Oliver; Rabinowitz, Joshua D | Annual review of biochemistry. | 2017 Jun 20; | 28654323 | |
| The relationship between cardiac endothelium and fibroblasts: it's complicated. | Karra, Ravi; Walter, Agoston O; Wu, Sean M | The Journal of clinical investigation. | 2017 Aug 01; | 28650344 | |
| Light in diagnosis, therapy and surgery. | Yun, Seok Hyun; Kwok, Sheldon J J | Nature biomedical engineering. | 2017; | 28649464 | |
| An efficient methodology to introduce o-(aminomethyl)phenyl-boronic acids into peptides: alkylation of secondary amines. | Hernandez, Erik T; Kolesnichenko, Igor V; Reuther, James F; Anslyn, Eric V | New journal of chemistry = Nouveau journal de chimie. | 2017 Jan 07; | 28649175 | |
| Microbial Genetic Composition Tunes Host Longevity. | Han, Bing; Sivaramakrishnan, Priya; Lin, Chih-Chun J; Neve, Isaiah A A; He, Jingquan; Tay, Li Wei Rachel; Sowa, Jessica N; Sizovs, Antons; Du, Guangwei; Wang, Jin; Herman, Christophe; Wang, Meng C | Cell. | 2017 Jun 15; | 28622510 | |
| Identification and Heterologous Production of a Benzoyl-Primed Tricarboxylic Acid Polyketide Intermediate from the Zaragozic Acid A Biosynthetic Pathway. | Liu, Nicholas; Hung, Yiu-Sun; Gao, Shu-Shan; Hang, Leibniz; Zou, Yi; Chooi, Yit-Heng; Tang, Yi | Organic letters. | 2017 Jul 07; | 28605916 | |
| Biodegradable Polyphosphazene-Based Blends for Regenerative Engineering. | Ogueri, Kenneth S; Escobar Ivirico, Jorge L; Nair, Lakshmi S; Allcock, Harry R; Laurencin, Cato T | Regenerative engineering and translational medicine. | 2017 Mar; | 28596987 | |
| Integration of over 9,000 mass spectrometry experiments builds a global map of human protein complexes. | Drew, Kevin; Lee, Chanjae; Huizar, Ryan L; Tu, Fan; Borgeson, Blake; McWhite, Claire D; Ma, Yun; Wallingford, John B; Marcotte, Edward M | Molecular systems biology. | 2017 Jun 08; | 28596423 | |
| Evaluating Public Health Interventions: 6. Modeling Ratios or Differences? Let the Data Tell Us. | Spiegelman, Donna; VanderWeele, Tyler J | American journal of public health. | 2017 Jul; | 28590865 | |
| Unravelling and Exploiting Astrocyte Dysfunction in Huntington's Disease. | Khakh, Baljit S; Beaumont, Vahri; Cachope, Roger; Munoz-Sanjuan, Ignacio; Goldman, Steven A; Grantyn, Rosemarie | Trends in neurosciences. | 2017 Jul; | 28578789 | |
| Noninvasive Deep Brain Stimulation via Temporally Interfering Electric Fields. | Grossman, Nir; Bono, David; Dedic, Nina; Kodandaramaiah, Suhasa B; Rudenko, Andrii; Suk, Ho-Jun; Cassara, Antonino M; Neufeld, Esra; Kuster, Niels; Tsai, Li-Huei; Pascual-Leone, Alvaro; Boyden, Edward S | Cell. | 2017 Jun 01; | 28575667 | |
| Mesoscale-duration activated states gate spiking in response to fast rises in membrane voltage in the awake brain. | Singer, Annabelle C; Talei Franzesi, Giovanni; Kodandaramaiah, Suhasa B; Flores, Francisco J; Cohen, Jeremy D; Lee, Albert K; Börgers, Christoph; Forest, Craig R; Kopell, Nancy J; Boyden, Edward S | Journal of neurophysiology. | 2017 May 31; | 28566460 | |
| The autism-linked UBE3A T485A mutant E3 ubiquitin ligase activates the Wnt/?-catenin pathway by inhibiting the proteasome. | Yi, Jason J; Paranjape, Smita R; Walker, Matthew P; Choudhury, Rajarshi; Wolter, Justin M; Fragola, Giulia; Emanuele, Michael J; Major, Michael B; Zylka, Mark J | The Journal of biological chemistry. | 2017 May 30; | 28559284 | |
| A Polecat's View of Patrolling Monocytes. | Williams, Jesse W; Randolph, Gwendalyn J; Zinselmeyer, Bernd H | Circulation research. | 2017 May 26; | 28546349 | |
| Systems-wide Studies Uncover Commander, a Multiprotein Complex Essential to Human Development. | Mallam, Anna L; Marcotte, Edward M | Cell systems. | 2017 May 24; | 28544880 | |
| Coordinated and Iterative Enzyme Catalysis in Fungal Polyketide Biosynthesis. | Hang, Leibniz; Liu, Nicholas; Tang, Yi | ACS catalysis. | 2016 Sep 02; | 28529817 | |
| CaMKII Autophosphorylation Is Necessary for Optimal Integration of Ca(2+) Signals during LTP Induction, but Not Maintenance. | Chang, Jui-Yun; Parra-Bueno, Paula; Laviv, Tal; Szatmari, Erzsebet M; Lee, Seok-Jin R; Yasuda, Ryohei | Neuron. | 2017 May 17; | 28521133 | |
| Mechanism of the P450-Catalyzed Oxidative Cyclization in the Biosynthesis of Griseofulvin. | Grandner, Jessica M; Cacho, Ralph A; Tang, Yi; Houk, K N | ACS catalysis. | 2016 Jul 01; | 28503354 | |
| Extraction and quantitation of NAD(P)(H). | Lu, Wenyun; Wang, Lin; Chen, Li; Hui, Sheng; Rabinowitz, Joshua D | Antioxidants & redox signaling. | 2017 May 12; | 28497978 | |
| Immunological implications of pregnancy-induced microchimerism. | Kinder, Jeremy M; Stelzer, Ina A; Arck, Petra C; Way, Sing Sing | Nature reviews. Immunology. | 2017 Aug; | 28480895 | |
| Nucleotide-time alignment for molecular recorders. | Cybulski, Thaddeus R; Boyden, Edward S; Church, George M; Tyo, Keith E J; Kording, Konrad P | PLoS computational biology. | 2017 May; | 28459860 | |
| Cell diversity and network dynamics in photosensitive human brain organoids. | Quadrato, Giorgia; Nguyen, Tuan; Macosko, Evan Z; Sherwood, John L; Min Yang, Sung; Berger, Daniel R; Maria, Natalie; Scholvin, Jorg; Goldman, Melissa; Kinney, Justin P; Boyden, Edward S; Lichtman, Jeff W; Williams, Ziv M; McCarroll, Steven A; Arlotta, Paola | Nature. | 2017 May 04; | 28445462 | |
| Microbial metabolites regulate host lipid metabolism through NR5A-Hedgehog signalling. | Lin, Chih-Chun Janet; Wang, Meng C | Nature cell biology. | 2017 May; | 28436966 | |
| rAMPing Up Stress Signaling: Protein AMPylation in Metazoans. | Truttmann, Matthias C; Ploegh, Hidde L | Trends in cell biology. | 2017 Apr 19; | 28433487 | |
| Engineering genetic circuit interactions within and between synthetic minimal cells. | Adamala, Katarzyna P; Martin-Alarcon, Daniel A; Guthrie-Honea, Katriona R; Boyden, Edward S | Nature chemistry. | 2017 May; | 28430194 | |
| Super-multiplex vibrational imaging. | Wei, Lu; Chen, Zhixing; Shi, Lixue; Long, Rong; Anzalone, Andrew V; Zhang, Luyuan; Hu, Fanghao; Yuste, Rafael; Cornish, Virginia W; Min, Wei | Nature. | 2017 Apr 27; | 28424513 | |
| Human umbilical cord plasma proteins revitalize hippocampal function in aged mice. | Castellano, Joseph M; Mosher, Kira I; Abbey, Rachelle J; McBride, Alisha A; James, Michelle L; Berdnik, Daniela; Shen, Jadon C; Zou, Bende; Xie, Xinmin S; Tingle, Martha; Hinkson, Izumi V; Angst, Martin S; Wyss-Coray, Tony | Nature. | 2017 04 27; | 28424512 | |
| Blood-Brain Barrier Permeability Is Regulated by Lipid Transport-Dependent Suppression of Caveolae-Mediated Transcytosis. | Andreone, Benjamin J; Chow, Brian Wai; Tata, Aleksandra; Lacoste, Baptiste; Ben-Zvi, Ayal; Bullock, Kevin; Deik, Amy A; Ginty, David D; Clish, Clary B; Gu, Chenghua | Neuron. | 2017 Apr 11; | 28416077 | |
| Nucleic acid detection with CRISPR-Cas13a/C2c2. | Gootenberg, Jonathan S; Abudayyeh, Omar O; Lee, Jeong Wook; Essletzbichler, Patrick; Dy, Aaron J; Joung, Julia; Verdine, Vanessa; Donghia, Nina; Daringer, Nichole M; Freije, Catherine A; Myhrvold, Cameron; Bhattacharyya, Roby P; Livny, Jonathan; Regev, Aviv; Koonin, Eugene V; Hung, Deborah T; Sabeti, Pardis C; Collins, James J; Zhang, Feng | Science (New York, N.Y.). | 2017 Apr 28; | 28408723 | |
| Single-cell whole-genome analyses by Linear Amplification via Transposon Insertion (LIANTI). | Chen, Chongyi; Xing, Dong; Tan, Longzhi; Li, Heng; Zhou, Guangyu; Huang, Lei; Xie, X Sunney | Science (New York, N.Y.). | 2017 Apr 14; | 28408603 | |
| Chd8 Mutation Leads to Autistic-like Behaviors and Impaired Striatal Circuits. | Platt, Randall J; Zhou, Yang; Slaymaker, Ian M; Shetty, Ashwin S; Weisbach, Niels R; Kim, Jin-Ah; Sharma, Jitendra; Desai, Mitul; Sood, Sabina; Kempton, Hannah R; Crabtree, Gerald R; Feng, Guoping; Zhang, Feng | Cell reports. | 2017 Apr 11; | 28402856 | |
| The impact of common dopamine D2 receptor gene polymorphisms on D2/3 receptor availability: C957T as a key determinant in putamen and ventral striatum. | Smith, C T; Dang, L C; Buckholtz, J W; Tetreault, A M; Cowan, R L; Kessler, R M; Zald, D H | Translational psychiatry. | 2017 Apr 11; | 28398340 | |
| Taking Stock of Retinal Gene Therapy: Looking Back and Moving Forward. | Bennett, Jean | Molecular therapy : the journal of the American Society of Gene Therapy. | 2017 May 03; | 28391961 | |
| Contractile force generation by 3D hiPSC-derived cardiac tissues is enhanced by rapid establishment of cellular interconnection in matrix with muscle-mimicking stiffness. | Lee, Soah; Serpooshan, Vahid; Tong, Xinming; Venkatraman, Sneha; Lee, Meelim; Lee, Jaecheol; Chirikian, Orlando; Wu, Joseph C; Wu, Sean M; Yang, Fan | Biomaterials. | 2017 Jul; | 28384492 | |
| Altered Cortical Ensembles in Mouse Models of Schizophrenia. | Hamm, Jordan P; Peterka, Darcy S; Gogos, Joseph A; Yuste, Rafael | Neuron. | 2017 Apr 05; | 28384469 | |
| Using DNA Methylation Profiling to Evaluate Biological Age and Longevity Interventions. | Petkovich, Daniel A; Podolskiy, Dmitriy I; Lobanov, Alexei V; Lee, Sang-Goo; Miller, Richard A; Gladyshev, Vadim N | Cell metabolism. | ; | 28380383 | |
| Understanding CARD Tricks in Apoptosomes. | Wang, Li; Qiao, Qi; Wu, Hao | Structure (London, England : 1993). | 2017 Apr 04; | 28380338 | |
| Mono-unsaturated fatty acids link H3K4me3 modifiers to C. elegans lifespan. | Han, Shuo; Schroeder, Elizabeth A; Silva-García, Carlos G; Hebestreit, Katja; Mair, William B; Brunet, Anne | Nature. | 2017 Apr 13; | 28379943 | |
| Bioacoustic-enabled patterning of human iPSC-derived cardiomyocytes into 3D cardiac tissue. | Serpooshan, Vahid; Chen, Pu; Wu, Haodi; Lee, Soah; Sharma, Arun; Hu, Daniel A; Venkatraman, Sneha; Ganesan, Adarsh Venkataraman; Usta, Osman Berk; Yarmush, Martin; Yang, Fan; Wu, Joseph C; Demirci, Utkan; Wu, Sean M | Biomaterials. | ; | 28376365 | |
| Non-overlapping Neural Networks in Hydra vulgaris. | Dupre, Christophe; Yuste, Rafael | Current biology : CB. | 2017 Apr 24; | 28366745 | |
| Collaborative Biosynthesis of Maleimide- and Succinimide-Containing Natural Products by Fungal Polyketide Megasynthases. | Sato, Michio; Dander, Jacob E; Sato, Chizuru; Hung, Yiu-Sun; Gao, Shu-Shan; Tang, Man-Cheng; Hang, Leibniz; Winter, Jaclyn M; Garg, Neil K; Watanabe, Kenji; Tang, Yi | Journal of the American Chemical Society. | 2017 Apr 19; | 28365998 | |
| In vivo imaging of neural activity. | Yang, Weijian; Yuste, Rafael | Nature methods. | 2017 Apr; | 28362436 | |
| Exosome-associated AAV2 vector mediates robust gene delivery into the murine retina upon intravitreal injection. | Wassmer, Sarah J; Carvalho, Livia S; György, Bence; Vandenberghe, Luk H; Maguire, Casey A | Scientific reports. | 2017 Mar 31; | 28361998 | |
| Poly(GP) proteins are a useful pharmacodynamic marker for C9ORF72-associated amyotrophic lateral sclerosis. | Gendron, Tania F; Chew, Jeannie; Stankowski, Jeannette N; Hayes, Lindsey R; Zhang, Yong-Jie; Prudencio, Mercedes; Carlomagno, Yari; Daughrity, Lillian M; Jansen-West, Karen; Perkerson, Emilie A; O'Raw, Aliesha; Cook, Casey; Pregent, Luc; Belzil, Veronique; van Blitterswijk, Marka; Tabassian, Lilia J; Lee, Chris W; Yue, Mei; Tong, Jimei; Song, Yuping; Castanedes-Casey, Monica; Rousseau, Linda; Phillips, Virginia; Dickson, Dennis W; Rademakers, Rosa; Fryer, John D; Rush, Beth K; Pedraza, Otto; Caputo, Ana M; Desaro, Pamela; Palmucci, Carla; Robertson, Amelia; Heckman, Michael G; Diehl, Nancy N; Wiggs, Edythe; Tierney, Michael; Braun, Laura; Farren, Jennifer; Lacomis, David; Ladha, Shafeeq; Fournier, Christina N; McCluskey, Leo F; Elman, Lauren B; Toledo, Jon B; McBride, Jennifer D; Tiloca, Cinzia; Morelli, Claudia; Poletti, Barbara; Solca, Federica; Prelle, Alessandro; Wuu, Joanne; Jockel-Balsarotti, Jennifer; Rigo, Frank; Ambrose, Christine; Datta, Abhishek; Yang, Weixing; Raitcheva, Denitza; Antognetti, Giovanna; McCampbell, Alexander; Van Swieten, John C; Miller, Bruce L; Boxer, Adam L; Brown, Robert H; Bowser, Robert; Miller, Timothy M; Trojanowski, John Q; Grossman, Murray; Berry, James D; Hu, William T; Ratti, Antonia; Traynor, Bryan J; Disney, Matthew D; Benatar, Michael; Silani, Vincenzo; Glass, Jonathan D; Floeter, Mary Kay; Rothstein, Jeffrey D; Boylan, Kevin B; Petrucelli, Leonard | Science translational medicine. | 2017 Mar 29; | 28356511 | |
| SMARCAD1 Contributes to the Regulation of Naive Pluripotency by Interacting with Histone Citrullination. | Xiao, Shu; Lu, Jia; Sridhar, Bharat; Cao, Xiaoyi; Yu, Pengfei; Zhao, Tianyi; Chen, Chieh-Chun; McDee, Darina; Sloofman, Laura; Wang, Yang; Rivas-Astroza, Marcelo; Telugu, Bhanu Prakash V L; Levasseur, Dana; Zhang, Kang; Liang, Han; Zhao, Jing Crystal; Tanaka, Tetsuya S; Stormo, Gary; Zhong, Sheng | Cell reports. | 2017 Mar 28; | 28355564 | |
| Gradual Suppression of Transcytosis Governs Functional Blood-Retinal Barrier Formation. | Chow, Brian Wai; Gu, Chenghua | Neuron. | 2017 Mar 22; | 28334606 | |
| Genome-scale CRISPR-Cas9 knockout and transcriptional activation screening. | Joung, Julia; Konermann, Silvana; Gootenberg, Jonathan S; Abudayyeh, Omar O; Platt, Randall J; Brigham, Mark D; Sanjana, Neville E; Zhang, Feng | Nature protocols. | 2017 Apr; | 28333914 | |
| Partial Reprogramming of Pluripotent Stem Cell-Derived Cardiomyocytes into Neurons. | Chuang, Wenpo; Sharma, Arun; Shukla, Praveen; Li, Guang; Mall, Moritz; Rajarajan, Kuppusamy; Abilez, Oscar J; Hamaguchi, Ryoko; Wu, Joseph C; Wernig, Marius; Wu, Sean M | Scientific reports. | 2017 Mar 22; | 28327614 | |
| Kinetics of Endogenous CaMKII Required for Synaptic Plasticity Revealed by Optogenetic Kinase Inhibitor. | Murakoshi, Hideji; Shin, Myung Eun; Parra-Bueno, Paula; Szatmari, Erzsebet M; Shibata, Akihiro C E; Yasuda, Ryohei | Neuron. | 2017 Apr 05; | 28318784 | |
| Cardiac Regeneration: Lessons From Development. | Galdos, Francisco X; Guo, Yuxuan; Paige, Sharon L; VanDusen, Nathan J; Wu, Sean M; Pu, William T | Circulation research. | 2017 Mar 17; | 28302741 | |
| Imaging and Optically Manipulating Neuronal Ensembles. | Carrillo-Reid, Luis; Yang, Weijian; Kang Miller, Jae-Eun; Peterka, Darcy S; Yuste, Rafael | Annual review of biophysics. | 2017 May 22; | 28301770 | |
| Dynamics of embryonic stem cell differentiation inferred from single-cell transcriptomics show a series of transitions through discrete cell states. | Jang, Sumin; Choubey, Sandeep; Furchtgott, Leon; Zou, Ling-Nan; Doyle, Adele; Menon, Vilas; Loew, Ethan B; Krostag, Anne-Rachel; Martinez, Refugio A; Madisen, Linda; Levi, Boaz P; Ramanathan, Sharad | eLife. | 2017 Mar 15; | 28296635 | |
| Mating and male pheromone kill Caenorhabditis males through distinct mechanisms. | Shi, Cheng; Runnels, Alexi M; Murphy, Coleen T | eLife. | 2017 Mar 14; | 28290982 | |
| Single-Cell Profiling of an In Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation. | Close, Jennie L; Yao, Zizhen; Levi, Boaz P; Miller, Jeremy A; Bakken, Trygve E; Menon, Vilas; Ting, Jonathan T; Wall, Abigail; Krostag, Anne-Rachel; Thomsen, Elliot R; Nelson, Angel M; Mich, John K; Hodge, Rebecca D; Shehata, Soraya I; Glass, Ian A; Bort, Susan; Shapovalova, Nadiya V; Ngo, N Kiet; Grimley, Joshua S; Phillips, John W; Thompson, Carol L; Ramanathan, Sharad; Lein, Ed | Neuron. | 2017 Mar 08; | 28279351 | |
| Non-enzymatic molecular damage as a prototypic driver of aging. | Golubev, Alexey; Hanson, Andrew D; Gladyshev, Vadim N | The Journal of biological chemistry. | 2017 Apr 14; | 28264930 | |
| Enzyme-Catalyzed Intramolecular Enantioselective Hydroalkoxylation. | Gao, Shu-Shan; Garcia-Borràs, Marc; Barber, Joyann S; Hai, Yang; Duan, Abing; Garg, Neil K; Houk, K N; Tang, Yi | Journal of the American Chemical Society. | 2017 Mar 15; | 28240554 | |
| Measuring speaker-listener neural coupling with functional near infrared spectroscopy. | Liu, Yichuan; Piazza, Elise A; Simony, Erez; Shewokis, Patricia A; Onaral, Banu; Hasson, Uri; Ayaz, Hasan | Scientific reports. | 2017 Feb 27; | 28240295 | |
| Age-associated molecular changes are deleterious and may modulate life span through diet. | Lee, Sang-Goo; Kaya, Alaattin; Avanesov, Andrei S; Podolskiy, Dmitriy I; Song, Eun Ju; Go, Du-Min; Jin, Gwi-Deuk; Hwang, Jae Yeon; Kim, Eun Bae; Kim, Dae-Yong; Gladyshev, Vadim N | Science advances. | 2017 Feb; | 28232953 | |
| Optical control of cell signaling by single-chain photoswitchable kinases. | Zhou, Xin X; Fan, Linlin Z; Li, Pengpeng; Shen, Kang; Lin, Michael Z | Science (New York, N.Y.). | 2017 02 24; | 28232577 | |
| Myeloid cells pave the way for lymphatic system development and maintenance. | Ivanov, Stoyan; Randolph, Gwendalyn J | Pflugers Archiv : European journal of physiology. | 2017 Apr; | 28220247 | |
| Mammalian Heart Regeneration: The Race to the Finish Line. | Doppler, Stefanie A; Deutsch, Marcus-Andre; Serpooshan, Vahid; Li, Guang; Dzilic, Elda; Lange, Rüdiger; Krane, Markus; Wu, Sean M | Circulation research. | 2017 Feb 17; | 28209796 | |
| High-throughput screening of tyrosine kinase inhibitor cardiotoxicity with human induced pluripotent stem cells. | Sharma, Arun; Burridge, Paul W; McKeithan, Wesley L; Serrano, Ricardo; Shukla, Praveen; Sayed, Nazish; Churko, Jared M; Kitani, Tomoya; Wu, Haodi; Holmström, Alexandra; Matsa, Elena; Zhang, Yuan; Kumar, Anusha; Fan, Alice C; Del Álamo, Juan C; Wu, Sean M; Moslehi, Javid J; Mercola, Mark; Wu, Joseph C | Science translational medicine. | 2017 Feb 15; | 28202772 | |
| A synthetic AAV vector enables safe and efficient gene transfer to the mammalian inner ear. | Landegger, Lukas D; Pan, Bifeng; Askew, Charles; Wassmer, Sarah J; Gluck, Sarah D; Galvin, Alice; Taylor, Ruth; Forge, Andrew; Stankovic, Konstantina M; Holt, Jeffrey R; Vandenberghe, Luk H | Nature biotechnology. | 2017 Mar; | 28165475 | |
| The Quest for the FFA and Where It Led. | Kanwisher, Nancy | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2017 Feb 01; | 28148806 | |
| Massively multiplex single-cell Hi-C. | Ramani, Vijay; Deng, Xinxian; Qiu, Ruolan; Gunderson, Kevin L; Steemers, Frank J; Disteche, Christine M; Noble, William S; Duan, Zhijun; Shendure, Jay | Nature methods. | 2017 Mar; | 28135255 | |
| Systematic Mapping of RNA-Chromatin Interactions In Vivo. | Sridhar, Bharat; Rivas-Astroza, Marcelo; Nguyen, Tri C; Chen, Weizhong; Yan, Zhangming; Cao, Xiaoyi; Hebert, Lucie; Zhong, Sheng | Current biology : CB. | 2017 Jan 25; | 28132817 | |
| Submillimeter diffusion tensor imaging and late gadolinium enhancement cardiovascular magnetic resonance of chronic myocardial infarction. | Pashakhanloo, Farhad; Herzka, Daniel A; Mori, Susumu; Zviman, Muz; Halperin, Henry; Gai, Neville; Bluemke, David A; Trayanova, Natalia A; McVeigh, Elliot R | Journal of cardiovascular magnetic resonance : official journal of the Society for Cardiovascular Magnetic Resonance. | 2017 Jan 11; | 28122618 | |
| Automated Remote Focusing, Drift Correction, and Photostimulation to Evaluate Structural Plasticity in Dendritic Spines. | Smirnov, Michael S; Evans, Paul R; Garrett, Tavita R; Yan, Long; Yasuda, Ryohei | PloS one. | 2017; | 28114380 | |
| Enzyme-catalyzed cationic epoxide rearrangements in quinolone alkaloid biosynthesis. | Zou, Yi; Garcia-Borràs, Marc; Tang, Mancheng C; Hirayama, Yuichiro; Li, Dehai H; Li, Li; Watanabe, Kenji; Houk, K N; Tang, Yi | Nature chemical biology. | 2017 Jan 23; | 28114276 | |
| Single-Cell Transcriptomic Analysis Defines Heterogeneity and Transcriptional Dynamics in the Adult Neural Stem Cell Lineage. | Dulken, Ben W; Leeman, Dena S; Boutet, Stéphane C; Hebestreit, Katja; Brunet, Anne | Cell reports. | 2017 Jan 17; | 28099854 | |
| A Single-Cell Roadmap of Lineage Bifurcation in Human ESC Models of Embryonic Brain Development. | Yao, Zizhen; Mich, John K; Ku, Sherman; Menon, Vilas; Krostag, Anne-Rachel; Martinez, Refugio A; Furchtgott, Leon; Mulholland, Heather; Bort, Susan; Fuqua, Margaret A; Gregor, Ben W; Hodge, Rebecca D; Jayabalu, Anu; May, Ryan C; Melton, Samuel; Nelson, Angelique M; Ngo, N Kiet; Shapovalova, Nadiya V; Shehata, Soraya I; Smith, Michael W; Tait, Leah J; Thompson, Carol L; Thomsen, Elliot R; Ye, Chaoyang; Glass, Ian A; Kaykas, Ajamete; Yao, Shuyuan; Phillips, John W; Grimley, Joshua S; Levi, Boaz P; Wang, Yanling; Ramanathan, Sharad | Cell stem cell. | 2017 Jan 05; | 28094016 | |
| ''Cross-sectional'' stepped wedge designs always reduce the required sample size when there is no time effect. | Zhou, Xin; Liao, Xiaomei; Spiegelman, Donna | Journal of clinical epidemiology. | 2017 Jan 16; | 28093263 | |
| Nuclear Localization of Mitochondrial TCA Cycle Enzymes as a Critical Step in Mammalian Zygotic Genome Activation. | Nagaraj, Raghavendra; Sharpley, Mark S; Chi, Fangtao; Braas, Daniel; Zhou, Yonggang; Kim, Rachel; Clark, Amander T; Banerjee, Utpal | Cell. | 2017 Jan 12; | 28086092 | |
| A Periplasmic Polymer Curves Vibrio cholerae and Promotes Pathogenesis. | Bartlett, Thomas M; Bratton, Benjamin P; Duvshani, Amit; Miguel, Amanda; Sheng, Ying; Martin, Nicholas R; Nguyen, Jeffrey P; Persat, Alexandre; Desmarais, Samantha M; VanNieuwenhze, Michael S; Huang, Kerwyn Casey; Zhu, Jun; Shaevitz, Joshua W; Gitai, Zemer | Cell. | 2017 Jan 12; | 28086090 | |
| tRNA Misacylation with Methionine in the Mouse Gut Microbiome in Situ. | Schwartz, Michael H; Pan, Tao | Microbial ecology. | 2017 Jan 09; | 28070678 | |
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| Integrative Analysis of PRKAG2 Cardiomyopathy iPS and Microtissue Models Identifies AMPK as a Regulator of Metabolism, Survival, and Fibrosis. | Hinson, J Travis; Chopra, Anant; Lowe, Andre; Sheng, Calvin C; Gupta, Rajat M; Kuppusamy, Rajarajan; O'Sullivan, John; Rowe, Glenn; Wakimoto, Hiroko; Gorham, Joshua; Zhang, Kehan; Musunuru, Kiran; Gerszten, Robert E; Wu, Sean M; Chen, Christopher S; Seidman, Jonathan G; Seidman, Christine E | Cell reports. | 2016 Dec 20; | 28009297 | |
| In vivo label-free photoacoustic flow cytography and on-the-spot laser killing of single circulating melanoma cells. | He, Yun; Wang, Lidai; Shi, Junhui; Yao, Junjie; Li, Lei; Zhang, Ruiying; Huang, Chih-Hsien; Zou, Jun; Wang, Lihong V | Scientific reports. | 2016 Dec 21; | 28000788 | |
| Rational Design of Small Molecules Targeting Oncogenic Noncoding RNAs from Sequence. | Disney, Matthew D; Angelbello, Alicia J | Accounts of chemical research. | 2016 Dec 20; | 27993012 | |
| Adaptive Chromatin Remodeling Drives Glioblastoma Stem Cell Plasticity and Drug Tolerance. | Liau, Brian B; Sievers, Cem; Donohue, Laura K; Gillespie, Shawn M; Flavahan, William A; Miller, Tyler E; Venteicher, Andrew S; Hebert, Christine H; Carey, Christopher D; Rodig, Scott J; Shareef, Sarah J; Najm, Fadi J; van Galen, Peter; Wakimoto, Hiroaki; Cahill, Daniel P; Rich, Jeremy N; Aster, Jon C; Suvà, Mario L; Patel, Anoop P; Bernstein, Bradley E | Cell stem cell. | 2017 Feb 02; | 27989769 | |
| Capturing and Manipulating Activated Neuronal Ensembles with CANE Delineates a Hypothalamic Social-Fear Circuit. | Sakurai, Katsuyasu; Zhao, Shengli; Takatoh, Jun; Rodriguez, Erica; Lu, Jinghao; Leavitt, Andrew D; Fu, Min; Han, Bao-Xia; Wang, Fan | Neuron. | 2016 Nov 23; | 27974160 | |
| Biochemical Characterization of a Eukaryotic Decalin-Forming Diels-Alderase. | Li, Li; Yu, Peiyuan; Tang, Man-Cheng; Zou, Yi; Gao, Shu-Shan; Hung, Yiu-Sun; Zhao, Muxun; Watanabe, Kenji; Houk, K N; Tang, Yi | Journal of the American Chemical Society. | 2016 Dec 14; | 27960349 | |
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| New Transgenic Mouse Lines for Selectively Targeting Astrocytes and Studying Calcium Signals in Astrocyte Processes In Situ and In Vivo. | Srinivasan, Rahul; Lu, Tsai-Yi; Chai, Hua; Xu, Ji; Huang, Ben S; Golshani, Peyman; Coppola, Giovanni; Khakh, Baljit S | Neuron. | 2016 Dec 21; | 27939582 | |
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| Cryo-EM Structure of Caspase-8 Tandem DED Filament Reveals Assembly and Regulation Mechanisms of the Death-Inducing Signaling Complex. | Fu, Tian-Min; Li, Yang; Lu, Alvin; Li, Zongli; Vajjhala, Parimala R; Cruz, Anthony C; Srivastava, Devendra B; DiMaio, Frank; Penczek, Pawel A; Siegel, Richard M; Stacey, Katryn J; Egelman, Edward H; Wu, Hao | Molecular cell. | 2016 Oct 20; | 27746017 | |
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| Autocrine BDNF-TrkB signalling within a single dendritic spine. | Harward, Stephen C; Hedrick, Nathan G; Hall, Charles E; Parra-Bueno, Paula; Milner, Teresa A; Pan, Enhui; Laviv, Tal; Hempstead, Barbara L; Yasuda, Ryohei; McNamara, James O | Nature. | 2016 Oct 06; | 27680698 | |
| Rho GTPase complementation underlies BDNF-dependent homo- and heterosynaptic plasticity. | Hedrick, Nathan G; Harward, Stephen C; Hall, Charles E; Murakoshi, Hideji; McNamara, James O; Yasuda, Ryohei | Nature. | 2016 Oct 06; | 27680697 | |
| Gene Therapy and Stem Cell Transplantation in Retinal Disease: The New Frontier. | MacLaren, Robert E; Bennett, Jean; Schwartz, Steven D | Ophthalmology. | 2016 Oct; | 27664291 | |
| iPSC-derived cardiomyocytes reveal abnormal TGF-? signalling in left ventricular non-compaction cardiomyopathy. | Kodo, Kazuki; Ong, Sang-Ging; Jahanbani, Fereshteh; Termglinchan, Vittavat; Hirono, Keiichi; InanlooRahatloo, Kolsoum; Ebert, Antje D; Shukla, Praveen; Abilez, Oscar J; Churko, Jared M; Karakikes, Ioannis; Jung, Gwanghyun; Ichida, Fukiko; Wu, Sean M; Snyder, Michael P; Bernstein, Daniel; Wu, Joseph C | Nature cell biology. | 2016 Oct; | 27642787 | |
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| Investigating the Interplay between Sister Chromatid Cohesion and Homolog Pairing in Drosophila Nuclei. | Senaratne, T Niroshini; Joyce, Eric F; Nguyen, Son C; Wu, C-Ting | PLoS genetics. | 2016 Aug; | 27541002 | |
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| Topoisomerase 1 Regulates Gene Expression in Neurons through Cleavage Complex-Dependent and -Independent Mechanisms. | Mabb, Angela M; Simon, Jeremy M; King, Ian F; Lee, Hyeong-Min; An, Lin-Kun; Philpot, Benjamin D; Zylka, Mark J | PloS one. | 2016; | 27231886 | |
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| Conflicting Selection Pressures Will Constrain Viral Escape from Interfering Particles: Principles for Designing Resistance-Proof Antivirals. | Rast, Luke I; Rouzine, Igor M; Rozhnova, Ganna; Bishop, Lisa; Weinberger, Ariel D; Weinberger, Leor S | PLoS computational biology. | 2016 May; | 27152856 | |
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| A scaffold protein connects type IV pili with the Chp chemosensory system to mediate activation of virulence signaling in Pseudomonas aeruginosa. | Inclan, Yuki F; Persat, Alexandre; Greninger, Alexander; Von Dollen, John; Johnson, Jeffery; Krogan, Nevan; Gitai, Zemer; Engel, Joanne N | Molecular microbiology. | 2016 May 3; | 27145134 | |
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| Durable antitumor responses to CD47 blockade require adaptive immune stimulation. | Sockolosky, Jonathan T; Dougan, Michael; Ingram, Jessica R; Ho, Chia Chi M; Kauke, Monique J; Almo, Steven C; Ploegh, Hidde L; Garcia, K Christopher | Proceedings of the National Academy of Sciences of the United States of America. | 2016 May 10; | 27091975 | |
| Tracking Resilience to Infections by Mapping Disease Space. | Torres, Brenda Y; Oliveira, Jose Henrique M; Thomas Tate, Ann; Rath, Poonam; Cumnock, Katherine; Schneider, David S | PLoS biology. | 2016 Apr; | 27088359 | |
| How Many Parameters Does It Take to Describe Disease Tolerance? | Louie, Alexander; Song, Kyung Han; Hotson, Alejandra; Thomas Tate, Ann; Schneider, David S | PLoS biology. | 2016 Apr; | 27088212 | |
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| Ketamine's Antidepressant Actions: Potential Mechanisms in the Primate Medial Prefrontal Circuits That Represent Aversive Experience. | Arnsten, Amy F T; Murray, John D; Seo, Hyojung; Lee, Daeyeol | Biological psychiatry. | 2016 May 01; | 27079495 | |
| Oxidative trans to cis Isomerization of Olefins in Polyketide Biosynthesis. | Yamamoto, Tsuyoshi; Tsunematsu, Yuta; Hara, Kodai; Suzuki, Tomohiro; Kishimoto, Shinji; Kawagishi, Hirokazu; Noguchi, Hiroshi; Hashimoto, Hiroshi; Tang, Yi; Hotta, Kinya; Watanabe, Kenji | Angewandte Chemie (International ed. in English). | 2016 May 17; | 27072782 | |
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| Defining Molecular Basis for Longevity Traits in Natural Yeast Isolates. | Kaya, Alaattin; Ma, Siming; Wasko, Brian; Lee, Mitchell; Kaeberlein, Matt; Gladyshev, Vadim N | npj aging and mechanisms of disease. | 2015; | 27030810 | |
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| Astrocyte scar formation aids central nervous system axon regeneration. | Anderson, Mark A; Burda, Joshua E; Ren, Yilong; Ao, Yan; O'Shea, Timothy M; Kawaguchi, Riki; Coppola, Giovanni; Khakh, Baljit S; Deming, Timothy J; Sofroniew, Michael V | Nature. | 2016 Apr 14; | 27027288 | |
| Cooperative Subnetworks of Molecularly Similar Interneurons in Mouse Neocortex. | Karnani, Mahesh M; Jackson, Jesse; Ayzenshtat, Inbal; Tucciarone, Jason; Manoocheri, Kasra; Snider, William G; Yuste, Rafael | Neuron. | 2016 Apr 6; | 27021171 | |
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| Dysfunctional Calcium and Glutamate Signaling in Striatal Astrocytes from Huntington's Disease Model Mice. | Jiang, Ruotian; Diaz-Castro, Blanca; Looger, Loren L; Khakh, Baljit S | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Mar 23; | 27013675 | |
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| CCR7 and IRF4-dependent dendritic cells regulate lymphatic collecting vessel permeability. | Ivanov, Stoyan; Scallan, Joshua P; Kim, Ki-Wook; Werth, Kathrin; Johnson, Michael W; Saunders, Brian T; Wang, Peter L; Kuan, Emma L; Straub, Adam C; Ouhachi, Melissa; Weinstein, Erica G; Williams, Jesse W; Briseño, Carlos; Colonna, Marco; Isakson, Brant E | The Journal of clinical investigation. | 2016 Apr 1; | 26999610 | |
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| Phenalenone Polyketide Cyclization Catalyzed by Fungal Polyketide Synthase and Flavin-Dependent Monooxygenase. | Gao, Shu-Shan; Duan, Abing; Xu, Wei; Yu, Peiyuan; Hang, Leibniz; Houk, K N; Tang, Yi | Journal of the American Chemical Society. | 2016 Mar 22; | 26978228 | |
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| Hybrid Microscopy: Enabling Inexpensive High-Performance Imaging through Combined Physical and Optical Magnifications. | Zhang, Yu Shrike; Chang, Jae-Byum; Alvarez, Mario Moisés; Trujillo-de Santiago, Grissel; Aleman, Julio; Batzaya, Byambaa; Krishnadoss, Vaishali; Ramanujam, Aishwarya Aravamudhan; Kazemzadeh-Narbat, Mehdi; Chen, Fei; Tillberg, Paul W; Dokmeci, Mehmet Remzi | Scientific reports. | 2016; | 26975883 | |
| Calcium imaging of neural circuits with extended depth-of-field light-sheet microscopy. | Quirin, Sean; Vladimirov, Nikita; Yang, Chao-Tsung; Peterka, Darcy S; Yuste, Rafael; B Ahrens, Misha | Optics letters. | 2016 Mar 1; | 26974063 | |
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| Novel Dopamine Therapeutics for Cognitive Deficits in Schizophrenia. | Arnsten, Amy F T; Girgis, Ragy R; Gray, David L; Mailman, Richard B | Biological psychiatry. | 2016 Jan 18; | 26946382 | |
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| Wireless Cortical Brain-Machine Interface for Whole-Body Navigation in Primates. | Rajangam, Sankaranarayani; Tseng, Po-He; Yin, Allen; Lehew, Gary; Schwarz, David; Lebedev, Mikhail A; Nicolelis, Miguel A L | Scientific reports. | 2016; | 26938468 | |
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| UVnovo: A de Novo Sequencing Algorithm Using Single Series of Fragment Ions via Chromophore Tagging and 351 nm Ultraviolet Photodissociation Mass Spectrometry. | Robotham, Scott A; Horton, Andrew P; Cannon, Joe R; Cotham, Victoria C; Marcotte, Edward M; Brodbelt, Jennifer S | Analytical chemistry. | 2016 Apr 5; | 26938041 | |
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| Association of Left Atrial Local Conduction Velocity With Late Gadolinium Enhancement on Cardiac Magnetic Resonance in Patients With Atrial Fibrillation. | Fukumoto, Kotaro; Habibi, Mohammadali; Ipek, Esra Gucuk; Zahid, Sohail; Khurram, Irfan M; Zimmerman, Stefan L; Zipunnikov, Vadim; Spragg, David; Ashikaga, Hiroshi; Trayanova, Natalia; Tomaselli, Gordon F; Rickard, John; Marine, Joseph E; Berger, Ronald D; | Circulation. Arrhythmia and electrophysiology. | 2016 Mar; | 26917814 | |
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| Embedding a Panoramic Representation of Infrared Light in the Adult Rat Somatosensory Cortex through a Sensory Neuroprosthesis. | Hartmann, Konstantin; Thomson, Eric E; Zea, Ivan; Yun, Richy; Mullen, Peter; Canarick, Jay; Huh, Albert; Nicolelis, Miguel A L | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Feb 24; | 26911689 | |
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| Intermittent drivers anchoring to structural heterogeneities as a major pathophysiological mechanism of human persistent atrial fibrillation. | Haissaguerre, Michel; Shah, Ashok J; Cochet, Hubert; Hocini, Meleze; Dubois, Remi; Efimov, Igor; Vigmond, Edward; Bernus, Olivier; Trayanova, Natalia | The Journal of physiology. | 2016 May 1; | 26890861 | |
| Membrane Potential Dynamics of CA1 Pyramidal Neurons during Hippocampal Ripples in Awake Mice. | Hulse, Brad K; Moreaux, Laurent C; Lubenov, Evgueniy V; Siapas, Athanassios G | Neuron. | 2016 Feb 17; | 800-13 | 26889811 |
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| Regenerative Medicine: Potential Mechanisms of Cardiac Recovery in Takotsubo Cardiomyopathy. | Chang, Andrew Y; Kittle, Jessie T; Wu, Sean M | Current treatment options in cardiovascular medicine. | 2016 Mar; | 26874708 | |
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| Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes. | Phanse, Sadhna; Wan, Cuihong; Borgeson, Blake; Tu, Fan; Drew, Kevin; Clark, Greg; Xiong, Xuejian; Kagan, Olga; Kwan, Julian; Bezginov, Alexandr; Chessman, Kyle; Pal, Swati; Cromar, Graham; Papoulas, Ophelia; Ni, Zuyao; Boutz, Daniel R; Stoilova, Snejana; | Data in brief. | 2016 Mar; | 26870755 | |
| Cytosolic NADH-NAD+ redox visualized in brain slices by two-photon fluorescence lifetime biosensor imaging. | Mongeon, Rebecca; Venkatachalam, Veena; Yellen, Gary | Antioxidants & redox signaling. | 2016 Feb 9; | 26857245 | |
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| On the Structure of Neuronal Population Activity under Fluctuations in Attentional State. | Ecker, Alexander S; Denfield, George H; Bethge, Matthias; Tolias, Andreas S | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Feb 3; | 26843656 | |
| Structurally Defined ?MHC-II Nanobody-Drug Conjugates: A Therapeutic and Imaging System for B-Cell Lymphoma. | Fang, Tao; Duarte, Joao N; Ling, Jingjing; Li, Zeyang; Guzman, Jonathan S; Ploegh, Hidde L | Angewandte Chemie (International ed. in English). | 2016 Feb 12; | 26840214 | |
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| Neural Circuits Underlying Visually Evoked Escapes in Larval Zebrafish. | Dunn, Timothy W; Gebhardt, Christoph; Naumann, Eva A; Riegler, Clemens; Ahrens, Misha B; Engert, Florian; Del Bene, Filippo | Neuron. | 2016 Feb 3; | 613-28 | 26804997 |
| Production of New Cladosporin Analogues by Reconstitution of the Polyketide Synthases Responsible for the Biosynthesis of this Antimalarial Agent. | Cochrane, Rachel V K; Sanichar, Randy; Lambkin, Gareth R; Reiz, Béla; Xu, Wei; Tang, Yi; Vederas, John C | Angewandte Chemie (International ed. in English). | 2016 Jan 11; | 26783060 | |
| Whole-brain activity mapping onto a zebrafish brain atlas. | Randlett, Owen; Wee, Caroline L; Naumann, Eva A; Nnaemeka, Onyeka; Schoppik, David; Fitzgerald, James E; Portugues, Ruben; Lacoste, Alix M B; Riegler, Clemens; Engert, Florian; Schier, Alexander F | Nature methods. | 2015 Nov; | 1039-46 | 26778924 |
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| Simultaneous Multi-plane Imaging of Neural Circuits. | Yang, Weijian; Miller, Jae-Eun Kang; Carrillo-Reid, Luis; Pnevmatikakis, Eftychios; Paninski, Liam; Yuste, Rafael; Peterka, Darcy S | Neuron. | 2016 Jan 20; | 269-84 | 26774159 |
| Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin. | Snyder, Matthew W; Kircher, Martin; Hill, Andrew J; Daza, Riza M; Shendure, Jay | Cell. | 2016 Jan 14; | 57-68 | 26771485 |
| Super-resolution imaging reveals distinct chromatin folding for different epigenetic states. | Boettiger, Alistair N; Bintu, Bogdan; Moffitt, Jeffrey R; Wang, Siyuan; Beliveau, Brian J; Fudenberg, Geoffrey; Imakaev, Maxim; Mirny, Leonid A; Wu, Chao-ting; Zhuang, Xiaowei | Nature. | 2016 Jan 21; | 26760202 | |
| Computational discovery of pathway-level genetic vulnerabilities in non-small-cell lung cancer. | Young, Jonathan H; Peyton, Michael; Seok Kim, Hyun; McMillan, Elizabeth; Minna, John D; White, Michael A; Marcotte, Edward M | Bioinformatics (Oxford, England). | 2016 May 1; | 26755624 | |
| Identification and Optimization of Anthranilic Acid Based Inhibitors of Replication Protein?A. | Patrone, James D; Pelz, Nicholas F; Bates, Brittney S; Souza-Fagundes, Elaine M; Vangamudi, Bhavatarini; Camper, Demarco V; Kuznetsov, Alexey G; Browning, Carrie F; Feldkamp, Michael D; Frank, Andreas O; Gilston, Benjamin A; Olejniczak, Edward T; Rossanese, Olivia W; Waterson, Alex G; Chazin, Walter J; Fesik, Stephen W | ChemMedChem. | 2016 Jan 8; | 26748787 | |
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| Myocardial Infarct Segmentation From Magnetic Resonance Images for Personalized Modeling of Cardiac Electrophysiology. | Ukwatta, Eranga; Arevalo, Hermenegild; Li, Kristina; Yuan, Jing; Qiu, Wu; Malamas, Peter; Wu, Katherine C; Trayanova, Natalia A; Vadakkumpadan, Fijoy | IEEE transactions on medical imaging. | 2016 Jun; | 26731693 | |
| A dual fluorescent reporter for the investigation of methionine mistranslation in live cells. | Gomes, Ana Cristina; Kordala, Anna J; Strack, Rita; Wang, Xiaoyun; Geslain, Renaud; Delaney, Kamila; Clark, Wesley C; Keenan, Robert; Pan, Tao | RNA (New York, N.Y.). | 2016 Mar; | 26729921 | |
| Rate-dependent force, intracellular calcium, and action potential voltage alternans are modulated by sarcomere length and heart failure induced-remodeling of thin filament regulation in human heart failure: A myocyte modeling study. | Zile, Melanie A; Trayanova, Natalia A | Progress in biophysics and molecular biology. | 2015 Dec 25; | 26724571 | |
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| Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals. | Sharma, Upasna; Conine, Colin C; Shea, Jeremy M; Boskovic, Ana; Derr, Alan G; Bing, Xin Y; Belleannee, Clemence; Kucukural, Alper; Serra, Ryan W; Sun, Fengyun; Song, Lina; Carone, Benjamin R; Ricci, Emiliano P; Li, Xin Z; Fauquier, Lucas; Moore, Melissa J | Science (New York, N.Y.). | 2016 Jan 22; | 26721685 | |
| In vivo genome editing improves muscle function in a mouse model of Duchenne muscular dystrophy. | Nelson, Christopher E; Hakim, Chady H; Ousterout, David G; Thakore, Pratiksha I; Moreb, Eirik A; Castellanos Rivera, Ruth M; Madhavan, Sarina; Pan, Xiufang; Ran, F Ann; Yan, Winston X; Asokan, Aravind; Zhang, Feng; Duan, Dongsheng; Gersbach, Charles A | Science (New York, N.Y.). | 2016 Jan 22; | 403-7 | 26721684 |
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| Genetic and Epigenetic Variation, but Not Diet, Shape the Sperm Methylome. | Shea, Jeremy M; Serra, Ryan W; Carone, Benjamin R; Shulha, Hennady P; Kucukural, Alper; Ziller, Michael J; Vallaster, Markus P; Gu, Hongcang; Tapper, Andrew R; Gardner, Paul D; Meissner, Alexander; Garber, Manuel; Rando, Oliver J | Developmental cell. | 2015 Dec 21; | 26702833 | |
| Close-Packed Silicon Microelectrodes for Scalable Spatially Oversampled Neural Recording. | Scholvin, Jorg; Kinney, Justin P; Bernstein, Jacob G; Moore-Kochlacs, Caroline; Kopell, Nancy; Fonstad, Clifton G; Boyden, Edward S | IEEE transactions on bio-medical engineering. | 2016 Jan; | 120-30 | 26699649 |
| Electrophysiological, transcriptomic and morphologic profiling of single neurons using Patch-seq. | Cadwell, Cathryn R; Palasantza, Athanasia; Jiang, Xiaolong; Berens, Philipp; Deng, Qiaolin; Yilmaz, Marlene; Reimer, Jacob; Shen, Shan; Bethge, Matthias; Tolias, Kimberley F; Sandberg, Rickard; Tolias, Andreas S | Nature biotechnology. | 2016 Feb; | 26689543 | |
| Mice with Shank3 Mutations Associated with ASD and Schizophrenia Display Both Shared and Distinct Defects. | Zhou, Yang; Kaiser, Tobias; Monteiro, Patrícia; Zhang, Xiangyu; Van der Goes, Marie S; Wang, Dongqing; Barak, Boaz; Zeng, Menglong; Li, Chenchen; Lu, Congyi; Wells, Michael; Amaya, Aldo; Nguyen, Shannon; Lewis, Michael; Sanjana, Neville; Zhou, Yongdi; Zha | Neuron. | 2016 Jan 6; | 26687841 | |
| Cell-Specific Transcriptional Profiling of Ciliated Sensory Neurons Reveals Regulators of Behavior and Extracellular Vesicle Biogenesis. | Wang, Juan; Kaletsky, Rachel; Silva, Malan; Williams, April; Haas, Leonard A; Androwski, Rebecca J; Landis, Jessica N; Patrick, Cory; Rashid, Alina; Santiago-Martinez, Dianaliz; Gravato-Nobre, Maria; Hodgkin, Jonathan; Hall, David H; Murphy, Coleen T; Barr, Maureen M | Current biology : CB. | 2015 Dec 21; | 26687621 | |
| The C. elegans adult neuronal IIS/FOXO transcriptome reveals adult phenotype regulators. | Kaletsky, Rachel; Lakhina, Vanisha; Arey, Rachel; Williams, April; Landis, Jessica; Ashraf, Jasmine; Murphy, Coleen T | Nature. | 2016 Jan 7; | 26675724 | |
| Applications of CRISPR-Cas systems in neuroscience. | Heidenreich, Matthias; Zhang, Feng | Nature reviews. Neuroscience. | 2016 Jan; | 26656253 | |
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| Olfactory sensory neurons transiently express multiple olfactory receptors during development. | Tan, Longzhi; Li, Qian; Xie, X Sunney | Molecular systems biology. | 2015 Dec; | 26646940 | |
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| The African Turquoise Killifish Genome Provides Insights into Evolution and Genetic Architecture of Lifespan. | Valenzano, Dario Riccardo; Benayoun, Bérénice A; Singh, Param Priya; Zhang, Elisa; Etter, Paul D; Hu, Chi-Kuo; Clément-Ziza, Mathieu; Willemsen, David; Cui, Rongfeng; Harel, Itamar; Machado, Ben E; Yee, Muh-Ching; Sharp, Sabrina C; Bustamante, Carlos D; Beyer, Andreas; Johnson, Eric A; Brunet, Anne | Cell. | 2015 Dec 3; | 1539-54 | 26638078 |
| Image-based Reconstruction of 3D Myocardial Infarct Geometry for Patient Specific Applications. | Ukwatta, Eranga; Rajchl, Martin; White, James; Pashakhanloo, Farhad; Herzka, Daniel A; McVeigh, Elliot; Lardo, Albert C; Trayanova, Natalia; Vadakkumpadan, Fijoy | Proceedings of SPIE--the International Society for Optical Engineering. | 2015 Feb 21; | 26633913 | |
| Enzyme-Mediated Modification of Single-Domain Antibodies for Imaging Modalities with Different Characteristics. | Rashidian, Mohammad; Wang, Lu; Edens, Jerre G; Jacobsen, Johanne T; Hossain, Intekhab; Wang, Qifan; Victora, Gabriel D; Vasdev, Neil; Ploegh, Hidde; Liang, Steven H | Angewandte Chemie (International ed. in English). | 2016 Jan 11; | 26630549 | |
| Understanding Programming of Fungal Iterative Polyketide Synthases: The Biochemical Basis for Regioselectivity by the Methyltransferase Domain in the Lovastatin Megasynthase. | Cacho, Ralph A; Thuss, Justin; Xu, Wei; Sanichar, Randy; Gao, Zhizeng; Nguyen, Allison; Vederas, John C; Tang, Yi | Journal of the American Chemical Society. | 2015 Dec 23; | 26630357 | |
| Rationally engineered Cas9 nucleases with improved specificity. | Slaymaker, Ian M; Gao, Linyi; Zetsche, Bernd; Scott, David A; Yan, Winston X; Zhang, Feng | Science (New York, N.Y.). | 2016 Jan 1; | 84-8 | 26628643 |
| How computer simulations of the human heart can improve anti-arrhythmia therapy. | Trayanova, Natalia A; Chang, Kelly C | The Journal of physiology. | 2016 May 1; | 26621489 | |
| Principles of connectivity among morphologically defined cell types in adult neocortex. | Jiang, Xiaolong; Shen, Shan; Cadwell, Cathryn R; Berens, Philipp; Sinz, Fabian; Ecker, Alexander S; Patel, Saumil; Tolias, Andreas S | Science (New York, N.Y.). | 2015 Nov 27; | aac9462 | 26612957 |
| Controlling AAV Tropism in the Nervous System with Natural and Engineered Capsids. | Castle, Michael J; Turunen, Heikki T; Vandenberghe, Luk H; Wolfe, John H | Methods in molecular biology (Clifton, N.J.). | 2016; | 133-49 | 26611584 |
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| An Autogenously Regulated Expression System for Gene Therapeutic Ocular Applications. | Sochor, Matthew A; Vasireddy, Vidyullatha; Drivas, Theodore G; Wojno, Adam; Doung, Thu; Shpylchak, Ivan; Bennicelli, Jeannette; Chung, Daniel; Bennett, Jean; Lewis, Mitchell | Scientific reports. | 2015 Nov 24; | 26597678 | |
| Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems. | Shmakov, Sergey; Abudayyeh, Omar O; Makarova, Kira S; Wolf, Yuri I; Gootenberg, Jonathan S; Semenova, Ekaterina; Minakhin, Leonid; Joung, Julia; Konermann, Silvana; Severinov, Konstantin; Zhang, Feng; Koonin, Eugene V | Molecular cell. | 2015 Nov 5; | 385-97 | 26593719 |
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| Bactericidal Antibiotics Induce Toxic Metabolic Perturbations that Lead to Cellular Damage. | Belenky, Peter; Ye, Jonathan D; Porter, Caroline B M; Cohen, Nadia R; Lobritz, Michael A; Ferrante, Thomas; Jain, Saloni; Korry, Benjamin J; Schwarz, Eric G; Walker, Graham C; Collins, James J | Cell reports. | 2015 Nov 3; | 968-80 | 26565910 |
| Defining Resistance and Tolerance to Cancer. | Dillman, Adler R; Schneider, David S | Cell reports. | 2015 Nov 3; | 884-7 | 26565901 |
| Variation in Taxonomic Composition of the Fecal Microbiota in an Inbred Mouse Strain across Individuals and Time. | Hoy, Yana Emmy; Bik, Elisabeth M; Lawley, Trevor D; Holmes, Susan P; Monack, Denise M; Theriot, Julie A; Relman, David A | PloS one. | 2015; | e0142825 | 26565698 |
| Evaluating Public Health Interventions: 1. Examples, Definitions, and a Personal Note. | Spiegelman, Donna | American journal of public health. | 2016 Jan; | 26562122 | |
| Multiscale photoacoustic tomography using reversibly switchable bacterial phytochrome as a near-infrared photochromic probe. | Yao, Junjie; Kaberniuk, Andrii A; Li, Lei; Shcherbakova, Daria M; Zhang, Ruiying; Wang, Lidai; Li, Guo; Verkhusha, Vladislav V; Wang, Lihong V | Nature methods. | 2016 Jan; | 67-73 | 26550774 |
| Convergence and Stability of a Class of Iteratively Re-weighted Least Squares Algorithms for Sparse Signal Recovery in the Presence of Noise. | Babadi, Behtash; Ba, Demba; Purdon, Patrick L; Brown, Emery N | IEEE transactions on signal processing : a publication of the IEEE Signal Processing Society. | 2013 Oct 30; | 183-195 | 26549965 |
| Convergent evolution of marine mammals is associated with distinct substitutions in common genes. | Zhou, Xuming; Seim, Inge; Gladyshev, Vadim N | Scientific reports. | 2015; | 16550 | 26549748 |
| Organization of the Mammalian Ionome According to Organ Origin, Lineage Specialization, and Longevity. | Ma, Siming; Lee, Sang-Goo; Kim, Eun Bae; Park, Thomas J; Seluanov, Andrei; Gorbunova, Vera; Buffenstein, Rochelle; Seravalli, Javier; Gladyshev, Vadim N | Cell reports. | 2015 Nov 17; | 1319-26 | 26549444 |
| Lift NIH restrictions on chimera research. | Sharma, Arun; Sebastiano, Vittorio; Scott, Christopher T; Magnus, David; Koyano-Nakagawa, Naoko; Garry, Daniel J; Witte, Owen N; Nakauchi, Hiromitsu; Wu, Joseph C; Weissman, Irving L; Wu, Sean M | Science (New York, N.Y.). | 2015 Nov 6; | 26542560 | |
| MouseNet v2: a database of gene networks for studying the laboratory mouse and eight other model vertebrates. | Kim, Eiru; Hwang, Sohyun; Kim, Hyojin; Shim, Hongseok; Kang, Byunghee; Yang, Sunmo; Shim, Jae Ho; Shin, Seung Yeon; Marcotte, Edward M; Lee, Insuk | Nucleic acids research. | 2016 Jan 4; | 26527726 | |
| Bessel-beam Grueneisen relaxation photoacoustic microscopy with extended depth of field. | Shi, Junhui; Wang, Lidai; Noordam, Cedric; Wang, Lihong V | Journal of biomedical optics. | 2015 Nov; | 116002 | 26524679 |
| Broadening the targeting range of Staphylococcus aureus CRISPR-Cas9 by modifying PAM recognition. | Kleinstiver, Benjamin P; Prew, Michelle S; Tsai, Shengdar Q; Nguyen, Nhu T; Topkar, Ved V; Zheng, Zongli; Joung, J Keith | Nature biotechnology. | 2015 Dec; | 1293-1298 | 26524662 |
| Fixed single-cell transcriptomic characterization of human radial glial diversity. | Thomsen, Elliot R; Mich, John K; Yao, Zizhen; Hodge, Rebecca D; Doyle, Adele M; Jang, Sumin; Shehata, Soraya I; Nelson, Angelique M; Shapovalova, Nadiya V; Levi, Boaz P; Ramanathan, Sharad | Nature methods. | 2016 Jan; | 87-93 | 26524239 |
| Cuffing-based photoacoustic flowmetry in humans in the optical diffusive regime. | Zhou, Yong; Liang, Jinyang; Wang, Lihong V | Journal of biophotonics. | 2016 Mar; | 208-12 | 26515158 |
| Dual-Modality Photoacoustic and Ultrasound Imaging System for Noninvasive Sentinel Lymph Node Detection in Patients with Breast Cancer. | Garcia-Uribe, Alejandro; Erpelding, Todd N; Krumholz, Arie; Ke, Haixin; Maslov, Konstantin; Appleton, Catherine; Margenthaler, Julie A; Wang, Lihong V | Scientific reports. | 2015; | 15748 | 26510774 |
| Intrinsic Antimicrobial Resistance Determinants in the Superbug Pseudomonas aeruginosa. | Murray, Justine L; Kwon, Taejoon; Marcotte, Edward M; Whiteley, Marvin | mBio. | 2015; | 26507235 | |
| Encrypted Three-dimensional Dynamic Imaging using Snapshot Time-of-flight Compressed Ultrafast Photography. | Liang, Jinyang; Gao, Liang; Hai, Pengfei; Li, Chiye; Wang, Lihong V | Scientific reports. | 2015; | 15504 | 26503834 |
| Can Sibling Sex Ratios Be Used as a Valid Test for the Prenatal Androgen Hypothesis of Autism Spectrum Disorders? | Cheslack-Postava, Keely; Susser, Ezra; Liu, Kayuet; Bearman, Peter S | PloS one. | 2015; | e0141338 | 26495967 |
| Comparison of 10,11-Dehydrocurvularin Polyketide Synthases from Alternaria cinerariae and Aspergillus terreus Highlights Key Structural Motifs. | Cochrane, Rachel V K; Gao, Zhizeng; Lambkin, Gareth R; Xu, Wei; Winter, Jaclyn M; Marcus, Sandra L; Tang, Yi; Vederas, John C | Chembiochem : a European journal of chemical biology. | 2015 Nov; | 26493380 | |
| Efficient delivery of nuclease proteins for genome editing in human stem cells and primary cells. | Liu, Jia; Gaj, Thomas; Yang, Yifeng; Wang, Nan; Shui, Sailan; Kim, Sojung; Kanchiswamy, Chidananda Nagamangala; Kim, Jin-Soo; Barbas 3rd, Carlos F | Nature protocols. | 2015 Nov; | 1842-59 | 26492140 |
| On testing neural network models. | Yuste, Rafael | Nature reviews. Neuroscience. | 2015 Dec; | 26486185 | |
| Poreless eggshells. | Lin, Haifan; Matzuk, Martin M | The Journal of clinical investigation. | 2015 Nov 2; | 4005-7 | 26485282 |
| A National Network of Neurotechnology Centers for the BRAIN Initiative. | Alivisatos, A Paul; Chun, Miyoung; Church, George M; Greenspan, Ralph J; Roukes, Michael L; Yuste, Rafael | Neuron. | 2015 Nov 4; | 26481036 | |
| Graphene Oxide Nanosheets Modified with Single-Domain Antibodies for Rapid and Efficient Capture of Cells. | Chen, Guan-Yu; Li, Zeyang; Theile, Christopher S; Bardhan, Neelkanth M; Kumar, Priyank V; Duarte, Joao N; Maruyama, Takeshi; Rashidfarrokh, Ali; Belcher, Angela M; Ploegh, Hidde L | Chemistry (Weinheim an der Bergstrasse, Germany). | 2015 Nov 23; | 26472062 | |
| Seeing Through the Surface: Non-invasive Characterization of Biomaterial-Tissue Interactions Using Photoacoustic Microscopy. | Zhang, Yu Shrike; Wang, Lihong V; Xia, Younan | Annals of biomedical engineering. | 2015 Oct 15; | 26471785 | |
| Discovery of Unclustered Fungal Indole Diterpene Biosynthetic Pathways through Combinatorial Pathway Reassembly in Engineered Yeast. | Tang, Man-Cheng; Lin, Hsiao-Ching; Li, Dehai; Zou, Yi; Li, Jian; Xu, Wei; Cacho, Ralph A; Hillenmeyer, Maureen E; Garg, Neil K; Tang, Yi | Journal of the American Chemical Society. | 2015 Nov 4; | 13724-7 | 26469304 |
| On the problem of boundaries and scaling for urban street networks. | Masucci, A Paolo; Arcaute, Elsa; Hatna, Erez; Stanilov, Kiril; Batty, Michael | Journal of the Royal Society, Interface / the Royal Society. | 2015 Oct 6; | 20150763 | 26468071 |
| Common variants in DRD2 are associated with sleep duration: the CARe consortium. | Cade, Brian E; Gottlieb, Daniel J; Lauderdale, Diane S; Bennett, David A; Buchman, Aron S; Buxbaum, Sarah G; De Jager, Philip L; Evans, Daniel S; Fülöp, Tibor; Gharib, Sina A; Johnson, W Craig; Kim, Hyun; Larkin, Emma K; Lee, Seung Ku; Lim, Andrew S; Punjabi, Naresh M; Shin, Chol; Stone, Katie L; Tranah, Gregory J; Weng, Jia; Yaffe, Kristine; Zee, Phyllis C; Patel, Sanjay R; Zhu, Xiaofeng; Redline, Susan; Saxena, Richa | Human molecular genetics. | 2016 Jan 1; | 167-79 | 26464489 |
| Efforts to make and apply humanized yeast. | Laurent, Jon M; Young, Jonathan H; Kachroo, Aashiq H; Marcotte, Edward M | Briefings in functional genomics. | 2016 Mar; | 26462863 | |
| Microbiota-Dependent Sequelae of Acute Infection Compromise Tissue-Specific Immunity. | Fonseca, Denise Morais da; Hand, Timothy W; Han, Seong-Ji; Gerner, Michael Y; Glatman Zaretsky, Arielle; Byrd, Allyson L; Harrison, Oliver J; Ortiz, Alexandra M; Quinones, Mariam; Trinchieri, Giorgio; Brenchley, Jason M; Brodsky, Igor E; Germain, Ronald N | Cell. | 2015 Oct 8; | 26451485 | |
| Maternal Ube3a Loss Disrupts Sleep Homeostasis But Leaves Circadian Rhythmicity Largely Intact. | Ehlen, J Christopher; Jones, Kelly A; Pinckney, Lennisha; Gray, Cloe L; Burette, Susan; Weinberg, Richard J; Evans, Jennifer A; Brager, Allison J; Zylka, Mark J; Paul, Ketema N; Philpot, Benjamin D; DeBruyne, Jason P | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2015 Oct 07; | 26446213 | |
| The molecular constituents of the blood-brain barrier. | Chow, Brian Wai; Gu, Chenghua | Trends in neurosciences. | 2015 Oct; | 598-608 | 26442694 |
| A New MRI-Based Model of Heart Function with Coupled Hemodynamics and Application to Normal and Diseased Canine Left Ventricles. | Choi, Young Joon; Constantino, Jason; Vedula, Vijay; Trayanova, Natalia; Mittal, Rajat | Frontiers in bioengineering and biotechnology. | 2015; | 26442254 | |
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| Fetal Mammalian Heart Generates a Robust Compensatory Response to Cell Loss. | Sturzu, Anthony C; Rajarajan, Kuppusamy; Passer, Derek; Plonowska, Karolina; Riley, Alyssa; Tan, Timothy C; Sharma, Arun; Xu, Adele F; Engels, Marc C; Feistritzer, Rebecca; Li, Guang; Selig, Martin K; Geissler, Richard; Robertson, Keston D; Scherrer-Crosb | Circulation. | 2015 Jul 14; | 109-21 | 25995316 |
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| Quantifying Pituitary-Adrenal Dynamics and Deconvolution of Concurrent Cortisol and Adrenocorticotropic Hormone Data by Compressed Sensing. | Faghih, Rose; Dahleh, Munther; Adler, Gail; Klerman, Elizabeth; Brown, Emery | IEEE transactions on bio-medical engineering. | 2015 Apr 29; | 25935025 | |
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| Ca(2+) signaling in astrocytes from Ip3r2(-/-) mice in brain slices and during startle responses in vivo. | Srinivasan, Rahul; Huang, Ben S; Venugopal, Sharmila; Johnston, April D; Chai, Hua; Zeng, Hongkui; Golshani, Peyman; Khakh, Baljit S | Nature neuroscience. | 2015 May; | 708-17 | 25894291 |
| Drosophila dicer-2 cleavage is mediated by helicase- and dsRNA termini-dependent states that are modulated by Loquacious-PD. | Sinha, Niladri K; Trettin, Kyle D; Aruscavage, P Joseph; Bass, Brenda L | Molecular cell. | 2015 May 7; | 406-17 | 25891075 |
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| Powerful anti-tumor and anti-angiogenic activity of a new anti-vascular endothelial growth factor receptor 1 peptide in colorectal cancer models. | Cicatiello, Valeria; Apicella, Ivana; Tudisco, Laura; Tarallo, Valeria; Formisano, Luigi; Sandomenico, Annamaria; Kim, Younghee; Bastos-Carvalho, Ana; Orlandi, Augusto; Ambati, Jayakrishna; Ruvo, Menotti; Bianco, Roberto; De Falco, Sandro | Oncotarget. | 2015 Apr 30; | 10563-76 | 25868854 |
| Derivation of highly purified cardiomyocytes from human induced pluripotent stem cells using small molecule-modulated differentiation and subsequent glucose starvation. | Sharma, Arun; Li, Guang; Rajarajan, Kuppusamy; Hamaguchi, Ryoko; Burridge, Paul W; Wu, Sean M | Journal of visualized experiments : JoVE. | 2015 Mar 18; | 25867738 | |
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| Tandem prenyltransferases catalyze isoprenoid elongation and complexity generation in biosynthesis of quinolone alkaloids. | Zou, Yi; Zhan, Zhajun; Li, Dehai; Tang, Mancheng; Cacho, Ralph A; Watanabe, Kenji; Tang, Yi | Journal of the American Chemical Society. | 2015 Apr 22; | 4980-3 | 25859931 |
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| Closed-loop, ultraprecise, automated craniotomies. | Pak, Nikita; Siegle, Joshua H; Kinney, Justin P; Denman, Daniel J; Blanche, Timothy J; Boyden, Edward S | Journal of neurophysiology. | 2015 Jun 1; | 3943-53 | 25855700 |
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| Discovery of tricyclic indoles that potently inhibit Mcl-1 using fragment-based methods and structure-based design. | Burke, Jason P; Bian, Zhiguo; Shaw, Subrata; Zhao, Bin; Goodwin, Craig M; Belmar, Johannes; Browning, Carrie F; Vigil, Dominico; Friberg, Anders; Camper, DeMarco V; Rossanese, Olivia W; Lee, Taekyu; Olejniczak, Edward T; Fesik, Stephen W | Journal of medicinal chemistry. | 2015 May 14; | 3794-805 | 25844895 |
| Neuronal Activity and CaMKII Regulate Kinesin-Mediated Transport of Synaptic AMPARs. | Hoerndli, Frédéric J; Wang, Rui; Mellem, Jerry E; Kallarackal, Angy; Brockie, Penelope J; Thacker, Colin; Madsen, David M; Maricq, Andres V | Neuron. | 2015 Apr 22; | 457-74 | 25843407 |
| In vivo genome editing using Staphylococcus aureus Cas9. | Ran, F Ann; Cong, Le; Yan, Winston X; Scott, David A; Gootenberg, Jonathan S; Kriz, Andrea J; Zetsche, Bernd; Shalem, Ophir; Wu, Xuebing; Makarova, Kira S; Koonin, Eugene V; Sharp, Phillip A; Zhang, Feng | Nature. | 2015 Apr 9; | 186-91 | 25830891 |
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| Massively Parallel Functional Analysis of BRCA1 RING Domain Variants. | Starita, Lea M; Young, David L; Islam, Muhtadi; Kitzman, Jacob O; Gullingsrud, Justin; Hause, Ronald J; Fowler, Douglas M; Parvin, Jeffrey D; Shendure, Jay; Fields, Stanley | Genetics. | 2015 Jun; | 413-22 | 25823446 |
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| Exploiting metabolic and antioxidant pathways to maintain vision in blinding disease. | Ramachandran, Pavitra S; Song, Ji Yun; Bennett, Jean | The Journal of clinical investigation. | 2015 Apr; | 25798615 | |
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| Modes of interaction between individuals dominate the topologies of real world networks. | Lee, Insuk; Kim, Eiru; Marcotte, Edward M | PloS one. | 2015; | 25793969 | |
| Whole-field visual motion drives swimming in larval zebrafish via a stochastic process. | Portugues, Ruben; Haesemeyer, Martin; Blum, Mirella L; Engert, Florian | The Journal of experimental biology. | 2015 May; | 25792753 | |
| N-Sulfonyl-?-lactam hapten as an effective labeling reagent for aldolase mAb. | Inokuma, Tsubasa; Fuller, Roberta P; Barbas 3rd, Carlos F | Bioorganic & medicinal chemistry letters. | 2015 Apr 15; | 1684-7 | 25791455 |
| Association between assisted reproductive technology conception and autism in California, 1997-2007. | Fountain, Christine; Zhang, Yujia; Kissin, Dmitry M; Schieve, Laura A; Jamieson, Denise J; Rice, Catherine; Bearman, Peter | American journal of public health. | 2015 May; | 963-71 | 25790396 |
| Principles of designing interpretable optogenetic behavior experiments. | Allen, Brian D; Singer, Annabelle C; Boyden, Edward S | Learning & memory (Cold Spring Harbor, N.Y.). | 2015 Apr; | 232-8 | 25787711 |
| Optochemical dissection of T-box gene-dependent medial floor plate development. | Payumo, Alexander Y; Walker, Whitney J; McQuade, Lindsey E; Yamazoe, Sayumi; Chen, James K | ACS chemical biology. | 2015 Jun 19; | 1466-75 | 25781211 |
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| Prolonged Period of Cortical Plasticity upon Redox Dysregulation in Fast-Spiking Interneurons. | Morishita, Hirofumi; Cabungcal, Jan-Harry; Chen, Ying; Do, Kim Q; Hensch, Takao K | Biological psychiatry. | 2015 Sep 15; | 396-402 | 25758057 |
| Visuomotor transformations underlying hunting behavior in zebrafish. | Bianco, Isaac H; Engert, Florian | Current biology : CB. | 2015 Mar 30; | 25754638 | |
| Genome-wide CRISPR screen in a mouse model of tumor growth and metastasis. | Chen, Sidi; Sanjana, Neville E; Zheng, Kaijie; Shalem, Ophir; Lee, Kyungheon; Shi, Xi; Scott, David A; Song, Jun; Pan, Jen Q; Weissleder, Ralph; Lee, Hakho; Zhang, Feng; Sharp, Phillip A | Cell. | 2015 Mar 12; | 1246-60 | 25748654 |
| Hypothalamic Agrp neurons drive stereotypic behaviors beyond feeding. | Dietrich, Marcelo O; Zimmer, Marcelo R; Bober, Jeremy; Horvath, Tamas L | Cell. | 2015 Mar 12; | 1222-32 | 25748653 |
| Structural biology. Structural basis for chemokine recognition and activation of a viral G protein-coupled receptor. | Burg, John S; Ingram, Jessica R; Venkatakrishnan, A J; Jude, Kevin M; Dukkipati, Abhiram; Feinberg, Evan N; Angelini, Alessandro; Waghray, Deepa; Dror, Ron O; Ploegh, Hidde L; Garcia, K Christopher | Science (New York, N.Y.). | 2015 Mar 6; | 1113-7 | 25745166 |
| High relaxivity Gd(III)-DNA gold nanostars: investigation of shape effects on proton relaxation. | Rotz, Matthew W; Culver, Kayla S B; Parigi, Giacomo; MacRenaris, Keith W; Luchinat, Claudio; Odom, Teri W; Meade, Thomas J | ACS nano. | 2015 Mar 24; | 3385-96 | 25723190 |
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| The DEAH-box helicase Dhr1 dissociates U3 from the pre-rRNA to promote formation of the central pseudoknot. | Sardana, Richa; Liu, Xin; Granneman, Sander; Zhu, Jieyi; Gill, Michael; Papoulas, Ophelia; Marcotte, Edward M; Tollervey, David; Correll, Carl C; Johnson, Arlen W | PLoS biology. | 2015 Feb; | e1002083 | 25710520 |
| Hypothalamic POMC neurons promote cannabinoid-induced feeding. | Koch, Marco; Varela, Luis; Kim, Jae Geun; Kim, Jung Dae; Hernández-Nuño, Francisco; Simonds, Stephanie E; Castorena, Carlos M; Vianna, Claudia R; Elmquist, Joel K; Morozov, Yury M; Rakic, Pasko; Bechmann, Ingo; Cowley, Michael A; Szigeti-Buck, Klara; Dietrich, Marcelo O; Gao, Xiao-Bing; Diano, Sabrina; Horvath, Tamas L | Nature. | 2015 Mar 5; | 45-50 | 25707796 |
| Threat perception after the Boston Marathon bombings: The effects of personal relevance and conceptual framing. | Wormwood, Jolie Baumann; Lynn, Spencer K; Feldman Barrett, Lisa; Quigley, Karen S | Cognition & emotion. | 2016 Apr; | 539-49 | 25707419 |
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| Multiscale modelling of relationships between protein classes and drug behavior across all diseases using the CANDO platform. | Sethi, Geetika; Chopra, Gaurav; Samudrala, Ram | Mini reviews in medicinal chemistry. | 2015; | 705-17 | 25694071 |
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| Intrinsic connectivity in the human brain does not reveal networks for 'basic' emotions. | Touroutoglou, Alexandra; Lindquist, Kristen A; Dickerson, Bradford C; Barrett, Lisa Feldman | Social cognitive and affective neuroscience. | 2015 Feb 12; | 25680990 | |
| Nonlytic spread of naked viruses. | Bird, Sara W; Kirkegaard, Karla | Autophagy. | 2015; | 430-1 | 25680079 |
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| Gene expression defines natural changes in mammalian lifespan. | Fushan, Alexey A; Turanov, Anton A; Lee, Sang-Goo; Kim, Eun Bae; Lobanov, Alexei V; Yim, Sun Hee; Buffenstein, Rochelle; Lee, Sang-Rae; Chang, Kyu-Tae; Rhee, Hwanseok; Kim, Jong-So; Yang, Kap-Seok; Gladyshev, Vadim N | Aging cell. | 2015 Jun; | 352-65 | 25677554 |
| Handheld photoacoustic probe to detect both melanoma depth and volume at high speed in vivo. | Zhou, Yong; Li, Guo; Zhu, Liren; Li, Chiye; Cornelius, Lynn A; Wang, Lihong V | Journal of biophotonics. | 2015 Feb 9; | 25676898 | |
| General strategy for biodetection in high ionic strength solutions using transistor-based nanoelectronic sensors. | Gao, Ning; Zhou, Wei; Jiang, Xiaocheng; Hong, Guosong; Fu, Tian-Ming; Lieber, Charles M | Nano letters. | 2015 Mar 11; | 2143-8 | 25664395 |
| 16p11.2 Deletion Syndrome Mice Display Sensory and Ultrasonic Vocalization Deficits During Social Interactions. | Yang, Mu; Mahrt, Elena J; Lewis, Freeman; Foley, Gillian; Portmann, Thomas; Dolmetsch, Ricardo E; Portfors, Christine V; Crawley, Jacqueline N | Autism research : official journal of the International Society for Autism Research. | 2015 Feb 7; | 25663600 | |
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| The evolution of drug resistance in clinical isolates of Candida albicans. | Ford, Christopher B; Funt, Jason M; Abbey, Darren; Issi, Luca; Guiducci, Candace; Martinez, Diego A; Delorey, Toni; Li, Bi Yu; White, Theodore C; Cuomo, Christina; Rao, Reeta P; Berman, Judith; Thompson, Dawn A; Regev, Aviv | eLife. | 2015; | e00662 | 25646566 |
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| Mathematical approaches to understanding and imaging atrial fibrillation: significance for mechanisms and management. | Trayanova, Natalia A | Circulation research. | 2014 Apr 25; | 1516-31 | 24763468 |
| Vasoactive intestinal polypeptide mediates circadian rhythms in mammalian olfactory bulb and olfaction. | Miller, Jae-Eun Kang; Granados-Fuentes, Daniel; Wang, Thomas; Marpegan, Luciano; Holy, Timothy E; Herzog, Erik D | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2014 Apr 23 | 6040-6 | 24760863 |
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| Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells. | Wu, Xuebing; Scott, David A; Kriz, Andrea J; Chiu, Anthony C; Hsu, Patrick D; Dadon, Daniel B; Cheng, Albert W; Trevino, Alexandro E; Konermann, Silvana; Chen, Sidi; Jaenisch, Rudolf; Zhang, Feng; Sharp, Phillip A | Nature biotechnology. | 2014 Jul; | 670-6 | 24752079 |
| Population code in mouse V1 facilitates readout of natural scenes through increased sparseness. | Froudarakis, Emmanouil; Berens, Philipp; Ecker, Alexander S; Cotton, R James; Sinz, Fabian H; Yatsenko, Dimitri; Saggau, Peter; Bethge, Matthias; Tolias, Andreas S | Nature neuroscience | 2014 Jun | 851-7 | 24747577 |
| Small-molecule RORýýt antagonists inhibit T helper 17 cell transcriptional network by divergent mechanisms. | Xiao, Sheng; Yosef, Nir; Yang, Jianfei; Wang, Yonghui; Zhou, Ling; Zhu, Chen; Wu, Chuan; Baloglu, Erkan; Schmidt, Darby; Ramesh, Radha; Lobera, Mercedes; Sundrud, Mark S; Tsai, Pei-Yun; Xiang, Zhijun; Wang, Jinsong; Xu, Yan; Lin, Xichen; Kretschmer, Karst | Immunity | 2014 Apr 17 | 477-89 | 24745332 |
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| Conditions and constraints for astrocyte calcium signaling in the hippocampal mossy fiber pathway. | Haustein, Martin D; Kracun, Sebastian; Lu, Xiao-Hong; Shih, Tiffany; Jackson-Weaver, Olan; Tong, Xiaoping; Xu, Ji; Yang, X William; O'Dell, Thomas J; Marvin, Jonathan S; Ellisman, Mark H; Bushong, Eric A; Looger, Loren L; Khakh, Baljit S | Neuron. | 2014 Apr 16; | 413-29 | 24742463 |
| Representing sex in the brain, one module at a time. | Yang, Cindy F; Shah, Nirao M | Neuron | 2014 Apr 16 | 261-78 | 24742456 |
| Protein-to-mRNA Ratios Are Conserved between Pseudomonas aeruginosa Strains. | Kwon, Taejoon; Huse, Holly K; Vogel, Christine; Whiteley, Marvin; Marcotte, Edward M | Journal of proteome research | 2014 Apr 17 | NULL | 24742327 |
| Calibration-free structured-illumination photoacoustic flowgraphy of transverse flow in scattering media. | Yao, Junjie; Gilson, Rebecca C; Maslov, Konstantin I; Wang, Lidai; Wang, Lihong V | Journal of biomedical optics | 2014 Apr | 46007 | 24718385 |
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| cAMP-PKA phosphorylation of tau confers risk for degeneration in aging association cortex. | Carlyle, Becky C; Nairn, Angus C; Wang, Min; Yang, Yang; Jin, Lu E; Simen, Arthur A; Ramos, Brian P; Bordner, Kelly A; Craft, George E; Davies, Peter; Pletikos, Mihovil; ?estan, Nenad; Arnsten, Amy F T; Paspalas, Constantinos D | Proceedings of the National Academy of Sciences of the United States of America. | 2014 Apr 1; | 5036-41 | 24707050 |
| Pathways Disrupted in Human ALS Motor Neurons Identified through Genetic Correction of Mutant SOD1. | Kiskinis, Evangelos; Sandoe, Jackson; Williams, Luis A; Boulting, Gabriella L; Moccia, Rob; Wainger, Brian J; Han, Steve; Peng, Theodore; Thams, Sebastian; Mikkilineni, Shravani; Mellin, Cassidy; Merkle, Florian T; Davis-Dusenbery, Brandi N; Ziller, Micha | Cell stem cell | 2014 Jun 5 | 781-95 | 24704492 |
| Influenza A H1N1 pandemic strain evolution--divergence and the potential for antigenic drift variants. | Klein, Eili Y; Serohijos, Adrian W R; Choi, Jeong-Mo; Shakhnovich, Eugene I; Pekosz, Andrew | PloS one | 2014 | e93632 | 24699432 |
| State dependence of noise correlations in macaque primary visual cortex. | Ecker, Alexander S; Berens, Philipp; Cotton, R James; Subramaniyan, Manivannan; Denfield, George H; Cadwell, Cathryn R; Smirnakis, Stelios M; Bethge, Matthias; Tolias, Andreas S | Neuron | 2014 Apr 2 | 235-48 | 24698278 |
| Chaperones and cardiac misfolding protein diseases. | Christians, Elisabeth S; Mustafi, Soumyajit B; Benjamin, Ivor J | Current protein & peptide science | 2014 May | 189-204 | 24694370 |
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| Improved in vitro efficacy of gold nanoconstructs by increased loading of G-quadruplex aptamer. | Dam, Duncan Hieu M; Lee, Raymond C; Odom, Teri W | Nano letters | 2014 May 14 | 2843-8 | 24689438 |
| Astrocyte Kir4.1 ion channel deficits contribute to neuronal dysfunction in Huntington's disease model mice. | Tong, Xiaoping; Ao, Yan; Faas, Guido C; Nwaobi, Sinifunanya E; Xu, Ji; Haustein, Martin D; Anderson, Mark A; Mody, Istvan; Olsen, Michelle L; Sofroniew, Michael V; Khakh, Baljit S | Nature neuroscience. | 2014 May; | 694-703 | 24686787 |
| Fully motorized optical-resolution photoacoustic microscopy. | Li, Lei; Yeh, Chenghung; Hu, Song; Wang, Lidai; Soetikno, Brian T; Chen, Ruimin; Zhou, Qifa; Shung, K Kirk; Maslov, Konstantin I; Wang, Lihong V | Optics letters | 2014 Apr 1 | 2117-20 | 24686689 |
| Comparison of the theoretical and real-world evolutionary potential of a genetic circuit. | Razo-Mejia, M; Boedicker, J Q; Jones, D; Deluna, A; Kinney, J B; Phillips, R | Physical biology | 2014 Apr | 26005 | 24685590 |
| Proteomic identification of monoclonal antibodies from serum. | Boutz, Daniel R; Horton, Andrew P; Wine, Yariv; Lavinder, Jason J; Georgiou, George; Marcotte, Edward M | Analytical chemistry | 2014 May 20 | 4758-66 | 24684310 |
| Transcriptional profiling of cells sorted by RNA abundance. | Klemm, Sandy; Semrau, Stefan; Wiebrands, Kay; Mooijman, Dylan; Faddah, Dina A; Jaenisch, Rudolf; van Oudenaarden, Alexander | Nature methods | 2014 May | 549-51 | 24681693 |
| Signaling by IL-6 promotes alternative activation of macrophages to limit endotoxemia and obesity-associated resistance to insulin. | Mauer, Jan; Chaurasia, Bhagirath; Goldau, Julia; Vogt, Merly C; Ruud, Johan; Nguyen, Khoa D; Theurich, Sebastian; Hausen, A Christine; Schmitz, Joel; Bronneke, Hella S; Estevez, Emma; Allen, Tamara L; Mesaros, Andrea; Partridge, Linda; Febbraio, Mark A; C | Nature immunology | 2014 May | 423-30 | 24681566 |
| Minireview: Metabolism of female reproduction: regulatory mechanisms and clinical implications. | Seli, Emre; Babayev, Elnur; Collins, Stephen C; Nemeth, Gabor; Horvath, Tamas L | Molecular endocrinology (Baltimore, Md.) | 2014 Jun | 790-804 | 24678733 |
| Using SV119-Gold Nanocage Conjugates to Eradicate Cancer Stem Cells Through a Combination of Photothermal and Chemo Therapies. | Sun, Tianmeng; Wang, Yi; Wang, Yucai; Xu, Jinbin; Zhao, Xin; Vangveravong, Suwanna; Mach, Robert H; Xia, Younan | Advanced healthcare materials | 2014 Mar 26 | NULL | 24677807 |
| REST and stress resistance in ageing and Alzheimer's disease. | Lu, Tao; Aron, Liviu; Zullo, Joseph; Pan, Ying; Kim, Haeyoung; Chen, Yiwen; Yang, Tun-Hsiang; Kim, Hyun-Min; Drake, Derek; Liu, X Shirley; Bennett, David A; Colaiacovo, Monica P; Yankner, Bruce A | Nature | 2014 Mar 27 | 448-54 | 24670762 |
| The new century of the brain. | Yuste, Rafael; Church, George M | Scientific American. | 2014 Mar; | 38-45 | 24660326 |
| The Determinants of Federal and State Enforcement of Workplace Safety Regulations: OSHA Inspections 1990-2010. | Jung, Juergen; Makowsky, Michael D | Journal of regulatory economics | 2014 Feb 1 | Jan-33 | 24659856 |
| Optimizing cardiac resynchronization therapy to minimize ATP consumption heterogeneity throughout the left ventricle: a simulation analysis using a canine heart failure model. | Hu, Yuxuan; Gurev, Viatcheslav; Constantino, Jason; Trayanova, Natalia | Heart rhythm : the official journal of the Heart Rhythm Society. | 2014 Jun; | 1063-9 | 24657430 |
| Whole-brain activity maps reveal stereotyped, distributed networks for visuomotor behavior. | Portugues, Ruben; Feierstein, Claudia E; Engert, Florian; Orger, Michael B | Neuron | 2014 Mar 19 | 1328-43 | 24656252 |
| Metabolic regulation of immune responses. | Ganeshan, Kirthana; Chawla, Ajay | Annual review of immunology | 2014 | 609-34 | 24655299 |
| Intention estimation in brain-machine interfaces. | Fan, Joline M; Nuyujukian, Paul; Kao, Jonathan C; Chestek, Cynthia A; Ryu, Stephen I; Shenoy, Krishna V | Journal of neural engineering | 2014 Feb | 16004 | 24654266 |
| Genetically encoded molecular probes to visualize and perturb signaling dynamics in living biological systems. | Sample, Vedangi; Mehta, Sohum; Zhang, Jin | Journal of cell science | 2014 Mar 15 | 1151-60 | 24634506 |
| Reconstitution of contractile actomyosin arrays. | Murrell, Michael; Thoresen, Todd; Gardel, Margaret | Methods in enzymology. | 2014; | 265-82 | 24630112 |
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| Plasmonics-enhanced and optically modulated delivery of gold nanostars into brain tumor. | Yuan, Hsiangkuo; Wilson, Christy M; Xia, Jun; Doyle, Sarah L; Li, Shuqin; Fales, Andrew M; Liu, Yang; Ozaki, Ema; Mulfaul, Kelly; Hanna, Gabi; Palmer, Gregory M; Wang, Lihong V; Grant, Gerald A; Vo-Dinh, Tuan | Nanoscale | 2014 Apr 21 | 4078-82 | 24619405 |
| Subunit composition of glutamate and gamma-aminobutyric acid receptors in status epilepticus. | Loddenkemper, Tobias; Talos, Delia M; Cleary, Ryan T; Joseph, Annelise; Sanchez Fernandez, Ivan; Alexopoulos, Andreas; Kotagal, Prakash; Najm, Imad; Jensen, Frances E | Epilepsy research | 2014 May | 605-15 | 24613745 |
| The transcription factor titration effect dictates level of gene expression. | Brewster, Robert C; Weinert, Franz M; Garcia, Hernan G; Song, Dan; Rydenfelt, Mattias; Phillips, Rob | Cell | 2014 Mar 13 | 1312-23 | 24612990 |
| CMV Infection, TLR-2 and -4 Expression, and Cytokine Profiles in Early-Onset Preeclampsia with HELLP Syndrome. | Xie, Fang; von Dadelszen, Peter; Nadeau, Joseph | American journal of reproductive immunology (New York, N.Y. : 1989) | 2014 Feb 24 | NULL | 24612145 |
| Enhancing the specificity of recombinase-mediated genome engineering through dimer interface redesign. | Gaj, Thomas; Sirk, Shannon J; Tingle, Ryan D; Mercer, Andrew C; Wallen, Mark C; Barbas 3rd, Carlos F | Journal of the American Chemical Society | 2014 Apr 2 | 5047-56 | 24611715 |
| Cross-linking in the silks of bees, ants and hornets. | Campbell, Peter M; Trueman, Holly E; Zhang, Qiang; Kojima, Katsura; Kameda, Tsunenori; Sutherland, Tara D | Insect biochemistry and molecular biology | 2014 May | 40-50 | 24607851 |
| Dependence of optical scattering from Intralipid in gelatin-gel based tissue-mimicking phantoms on mixing temperature and time. | Lai, Puxiang; Xu, Xiao; Wang, Lihong V | Journal of biomedical optics | 2014 Mar | 35002 | 24604534 |
| Common genetic variants modulate pathogen-sensing responses in human dendritic cells. | Lee, Mark N; Ye, Chun; Villani, Alexandra-Chloe; Raj, Towfique; Li, Weibo; Eisenhaure, Thomas M; Imboywa, Selina H; Chipendo, Portia I; Ran, F Ann; Slowikowski, Kamil; Ward, Lucas D; Raddassi, Khadir; McCabe, Cristin; Lee, Michelle H; Frohlich, Irene Y; H | Science (New York, N.Y.) | 2014 Mar 7 | 1246980 | 24604203 |
| Medicine. Combating evolution to fight disease. | Rosenberg, Susan M; Queitsch, Christine | Science (New York, N.Y.) | 2014 Mar 7 | 1088-9 | 24604189 |
| Maternal nutrition induces pervasive gene expression changes but no detectable DNA methylation differences in the liver of adult offspring. | Cannon, Matthew V; Buchner, David A; Hester, James; Miller, Hadley; Sehayek, Ephraim; Nadeau, Joseph H; Serre, David | PloS one | 2014 | e90335 | 24594983 |
| Recasting the theory of mosquito-borne pathogen transmission dynamics and control. | Smith, David L; Perkins, T Alex; Reiner Jr, Robert C; Barker, Christopher M; Niu, Tianchan; Chaves, Luis Fernando; Ellis, Alicia M; George, Dylan B; Le Menach, Arnaud; Pulliam, Juliet R C; Bisanzio, Donal; Buckee, Caroline; Chiyaka, Christinah; Cummings, | Transactions of the Royal Society of Tropical Medicine and Hygiene | 2014 Apr | 185-97 | 24591453 |
| Calibration-free absolute quantification of particle concentration by statistical analyses of photoacoustic signals in vivo. | Zhou, Yong; Yao, Junjie; Maslov, Konstantin I; Wang, Lihong V | Journal of biomedical optics | 2014 Mar | 37001 | 24589987 |
| Integrated photoacoustic, confocal, and two-photon microscope. | Rao, Bin; Soto, Florentina; Kerschensteiner, Daniel; Wang, Lihong V | Journal of biomedical optics | 2014 Mar | 36002 | 24589986 |
| CRISPR-Cas systems for editing, regulating and targeting genomes. | Sander, Jeffry D; Joung, J Keith | Nature biotechnology | 2014 Apr | 347-55 | 24584096 |
| Lestaurtinib (CEP-701) attenuates "second hit" kainic acid-induced seizures following early life hypoxic seizures. | Obeid, Makram; Rosenberg, Evan C; Klein, Peter M; Jensen, Frances E | Epilepsy research | 2014 May | 806-10 | 24582454 |
| Statistical mechanical model of coupled transcription from multiple promoters due to transcription factor titration. | Rydenfelt, Mattias; Cox, Robert Sidney; Garcia, Hernan; Phillips, Rob | Physical review. E, Statistical, nonlinear, and soft matter physics | 2014 Jan | 12702 | 24580252 |
| Generation of complexity in fungal terpene biosynthesis: discovery of a multifunctional cytochrome P450 in the fumagillin pathway. | Lin, Hsiao-Ching; Tsunematsu, Yuta; Dhingra, Sourabh; Xu, Wei; Fukutomi, Manami; Chooi, Yit-Heng; Cane, David E; Calvo, Ana M; Watanabe, Kenji; Tang, Yi | Journal of the American Chemical Society | 2014 Mar 19 | 4426-36 | 24568283 |
| The future of whole-cell modeling. | Macklin, Derek N; Ruggero, Nicholas A; Covert, Markus W | Current opinion in biotechnology | 2014 Feb 17 | 111-115 | 24556244 |
| Approach for targeting Ras with small molecules that activate SOS-mediated nucleotide exchange. | Burns, Michael C; Sun, Qi; Daniels, R Nathan; Camper, DeMarco; Kennedy, J Phillip; Phan, Jason; Olejniczak, Edward T; Lee, Taekyu; Waterson, Alex G; Rossanese, Olivia W; Fesik, Stephen W | Proceedings of the National Academy of Sciences of the United States of America | 2014 Mar 4 | 3401-6 | 24550516 |
| Kinetic and equilibrium binding characterization of aptamers to small molecules using a label-free, sensitive, and scalable platform. | Chang, Andrew L; McKeague, Maureen; Liang, Joe C; Smolke, Christina D | Analytical chemistry. | 2014 Apr 1; | 3273-8 | 24548121 |
| fast_protein_cluster: parallel and optimized clustering of large-scale protein modeling data. | Hung, Ling-Hong; Samudrala, Ram | Bioinformatics (Oxford, England) | 2014 Jun 15 | 1774-6 | 24532722 |
| Verapamil, and its metabolite norverapamil, inhibit macrophage-induced, bacterial efflux pump-mediated tolerance to multiple anti-tubercular drugs. | Adams, Kristin N; Szumowski, John D; Ramakrishnan, Lalita | The Journal of infectious diseases. | 2014 Aug 1; | 456-66 | 24532601 |
| Broad specificity profiling of TALENs results in engineered nucleases with improved DNA-cleavage specificity. | Guilinger, John P; Pattanayak, Vikram; Reyon, Deepak; Tsai, Shengdar Q; Sander, Jeffry D; Joung, J Keith; Liu, David R | Nature methods | 2014 Apr | 429-35 | 24531420 |
| Statistical modeling of behavioral dynamics during propofol-induced loss of consciousness. | Wong, Kin Foon Kevin; Smith, Anne C; Pierce, Eric T; Harrell, P Grace; Walsh, John L; Salazar-Gomez, Andres Felipe; Tavares, Casie L; Purdon, Patrick L; Brown, Emery N | Journal of neuroscience methods | 2014 Apr 30 | 65-74 | 24530701 |
| Crystal structure of Cas9 in complex with guide RNA and target DNA. | Nishimasu, Hiroshi; Ran, F Ann; Hsu, Patrick D; Konermann, Silvana; Shehata, Soraya I; Dohmae, Naoshi; Ishitani, Ryuichiro; Zhang, Feng; Nureki, Osamu | Cell | 2014 Feb 27 | 935-49 | 24529477 |
| Structural insights on the role of antibodies in HIV-1 vaccine and therapy. | West Jr, Anthony P; Scharf, Louise; Scheid, Johannes F; Klein, Florian; Bjorkman, Pamela J; Nussenzweig, Michel C | Cell | 2014 Feb 13 | 633-48 | 24529371 |
| Lipid Modulation of Calcium Flux through CaV2.3 Regulates Acrosome Exocytosis and Fertilization. | Cohen, Roy; Buttke, Danielle E; Asano, Atsushi; Mukai, Chinatsu; Nelson, Jacquelyn L; Ren, Dongjun; Miller, Richard J; Cohen-Kutner, Moshe; Atlas, Daphne; Travis, Alexander J | Developmental cell | 2014 Feb 10 | 310-21 | 24525187 |
| Dissecting genomic diversity, one cell at a time. | Blainey, Paul C; Quake, Stephen R | Nature methods | 2014 Jan | 19-21 | 24524132 |
| Photoacoustic thermography of tissue. | Ke, Haixin; Tai, Stephen; Wang, Lihong V | Journal of biomedical optics | 2014 | 26003 | 24522803 |
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| Central role for RNase YbeY in Hfq-dependent and Hfq-independent small-RNA regulation in bacteria. | Pandey, Shree P; Winkler, Jonathan A; Li, Hu; Camacho, Diogo M; Collins, James J; Walker, Graham C | BMC genomics | 2014 | 121 | 24511998 |
| Metabolite Profiling of 5'-AMP-Induced Hypometabolism. | Zhao, Zhaoyang; Van Oort, Anita; Tao, Zhenyin; O'Brien 3rd, William G; Lee, Cheng Chi | Metabolomics : Official journal of the Metabolomic Society | 2014 Feb 1 | 63-76 | 24511307 |
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| Neural circuits as computational dynamical systems. | Sussillo, David | Current opinion in neurobiology | 2014 Apr | 156-63 | 24509098 |
| Self-recalibrating classifiers for intracortical brain-computer interfaces. | Bishop, William; Chestek, Cynthia C; Gilja, Vikash; Nuyujukian, Paul; Foster, Justin D; Ryu, Stephen I; Shenoy, Krishna V; Yu, Byron M | Journal of neural engineering | 2014 Apr | 26001 | 24503597 |
| Cultural Relativity in Perceiving Emotion From Vocalizations. | Gendron, Maria; Roberson, Debi; van der Vyver, Jacoba Marieta; Barrett, Lisa Feldman | Psychological science | 2014 Feb 5 | NULL | 24501109 |
| Identification of cinnabarinic acid as a novel endogenous aryl hydrocarbon receptor ligand that drives IL-22 production. | Lowe, Margaret M; Mold, Jeff E; Kanwar, Bittoo; Huang, Yong; Louie, Alexander; Pollastri, Michael P; Wang, Cuihua; Patel, Gautam; Franks, Diana G; Schlezinger, Jennifer; Sherr, David H; Silverstone, Allen E; Hahn, Mark E; McCune, Joseph M | PloS one | 2014 | e87877 | 24498387 |
| Institutions and cooperation in an ecology of games. | Smaldino, Paul E; Lubell, Mark | Artificial life | 2014 | 207-21 | 24494613 |
| Identification of germline transcriptional regulatory elements in Aedes aegypti. | Akbari, Omar S; Papathanos, Philippos A; Sandler, Jeremy E; Kennedy, Katie; Hay, Bruce A | Scientific reports | 2014 | 3954 | 24492376 |
| Discovery of a potent stapled helix peptide that binds to the 70N domain of replication protein A. | Frank, Andreas O; Vangamudi, Bhavatarini; Feldkamp, Michael D; Souza-Fagundes, Elaine M; Luzwick, Jessica W; Cortez, David; Olejniczak, Edward T; Waterson, Alex G; Rossanese, Olivia W; Chazin, Walter J; Fesik, Stephen W | Journal of medicinal chemistry | 2014 Mar 27 | 2455-61 | 24491171 |
| Graphene-based contrast agents for photoacoustic and thermoacoustic tomography. | Lalwani, Gaurav; Cai, Xin; Nie, Liming; Wang, Lihong V; Sitharaman, Balaji | Photoacoustics | 2013 Dec 1 | 62-67 | 24490141 |
| Sodium current reduction unmasks a structure-dependent substrate for arrhythmogenesis in the normal ventricles. | Boyle, Patrick M; Park, Carolyn J; Arevalo, Hermenegild J; Vigmond, Edward J; Trayanova, Natalia A | PloS one. | 2014; | e86947 | 24489810 |
| Deconvolution of serum cortisol levels by using compressed sensing. | Faghih, Rose T; Dahleh, Munther A; Adler, Gail K; Klerman, Elizabeth B; Brown, Emery N | PloS one | 2014 | e85204 | 24489656 |
| A proteomic survey of widespread protein aggregation in yeast. | O'Connell, Jeremy D; Tsechansky, Mark; Royall, Ariel; Boutz, Daniel R; Ellington, Andrew D; Marcotte, Edward M | Molecular bioSystems. | 2014 Apr; | 851-61 | 24488121 |
| Spatially Fourier-encoded photoacoustic microscopy using a digital micromirror device. | Liang, Jinyang; Gao, Liang; Li, Chiye; Wang, Lihong V | Optics letters | 2014 Feb 1 | 430-3 | 24487832 |
| Bacteriophages use an expanded genetic code on evolutionary paths to higher fitness. | Hammerling, Michael J; Ellefson, Jared W; Boutz, Daniel R; Marcotte, Edward M; Ellington, Andrew D; Barrick, Jeffrey E | Nature chemical biology | 2014 Mar | 178-80 | 24487692 |
| Multicontrast photoacoustic in vivo imaging using near-infrared fluorescent proteins. | Krumholz, Arie; Shcherbakova, Daria M; Xia, Jun; Wang, Lihong V; Verkhusha, Vladislav V | Scientific reports | 2014 | 3939 | 24487319 |
| A general framework for estimating the relative pathogenicity of human genetic variants. | Kircher, Martin; Witten, Daniela M; Jain, Preti; O'Roak, Brian J; Cooper, Gregory M; Shendure, Jay | Nature genetics | 2014 Mar | 310-5 | 24487276 |
| Lis1 regulates asymmetric division in hematopoietic stem cells and in leukemia. | Zimdahl, Bryan; Ito, Takahiro; Blevins, Allen; Bajaj, Jeevisha; Konuma, Takaaki; Weeks, Joi; Koechlein, Claire S; Kwon, Hyog Young; Arami, Omead; Rizzieri, David; Broome, H Elizabeth; Chuah, Charles; Oehler, Vivian G; Sasik, Roman; Hardiman, Gary; Reya, T | Nature genetics | 2014 Mar | 245-52 | 24487275 |
| Cortical activity in the null space: permitting preparation without movement. | Kaufman, Matthew T; Churchland, Mark M; Ryu, Stephen I; Shenoy, Krishna V | Nature neuroscience | 2014 Mar | 440-8 | 24487233 |
| Photoimprint photoacoustic microscopy for three-dimensional label-free subdiffraction imaging. | Yao, Junjie; Wang, Lidai; Li, Chiye; Zhang, Chi; Wang, Lihong V | Physical review letters | 2014 Jan 10 | 14302 | 24483902 |
| Spin models inferred from patient-derived viral sequence data faithfully describe HIV fitness landscapes. | Shekhar, Karthik; Ruberman, Claire F; Ferguson, Andrew L; Barton, John P; Kardar, Mehran; Chakraborty, Arup K | Physical review. E, Statistical, nonlinear, and soft matter physics. | 2013 Dec; | 62705 | 24483484 |
| Long term stability of nanowire nanoelectronics in physiological environments. | Zhou, Wei; Dai, Xiaochuan; Fu, Tian-Ming; Xie, Chong; Liu, Jia; Lieber, Charles M | Nano letters | 2014 Mar 12 | 1614-9 | 24479700 |
| Nonlinear light-sheet fluorescence microscopy by photobleaching imprinting. | Gao, Liang; Zhu, Liren; Li, Chiye; Wang, Lihong V | Journal of the Royal Society, Interface / the Royal Society | 2014 Apr 6 | 20130851 | 24478278 |
| Photoacoustic measurement of the Gruneisen parameter of tissue. | Yao, Da-Kang; Zhang, Chi; Maslov, Konstantin; Wang, Lihong V | Journal of biomedical optics | 2014 Jan | 17007 | 24474512 |
| Ultrasonically encoded wavefront shaping for focusing into random media. | Tay, Jian Wei; Lai, Puxiang; Suzuki, Yuta; Wang, Lihong V | Scientific reports | 2014 | 3918 | 24472822 |
| Emerging applications of phase-change materials (PCMs): teaching an old dog new tricks. | Hyun, Dong Choon; Levinson, Nathanael S; Jeong, Unyong; Xia, Younan | Angewandte Chemie (International ed. in English) | 2014 Apr 7 | 3780-95 | 24470287 |
| Ferromagnetic nanoparticles with peroxidase-like activity enhance the cleavage of biological macromolecules for biofilm elimination. | Gao, Lizeng; Giglio, Krista M; Nelson, Jacquelyn L; Sondermann, Holger; Travis, Alexander J | Nanoscale | 2014 Mar 7 | 2588-93 | 24468900 |
| fMRI of retina-originated phosphenes experienced by patients with leber congenital amaurosis. | Ashtari, Manzar; Cyckowski, Laura; Yazdi, Alborz; Viands, Amanda; Marshall, Kathleen; Bokkon, Istvan; Maguire, Albert; Bennett, Jean | PloS one | 2014 | e86068 | 24465873 |
| Cell-penetrating peptide-mediated delivery of TALEN proteins via bioconjugation for genome engineering. | Liu, Jia; Gaj, Thomas; Patterson, James T; Sirk, Shannon J; Barbas 3rd, Carlos F | PloS one | 2014 | e85755 | 24465685 |
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| A cytochrome P450 serves as an unexpected terpene cyclase during fungal meroterpenoid biosynthesis. | Chooi, Yit-Heng; Hong, Young J; Cacho, Ralph A; Tantillo, Dean J; Tang, Yi | Journal of the American Chemical Society | 2013 Nov 13 | 16805-8 | 24161266 |
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| AMPA receptor antagonist NBQX attenuates later-life epileptic seizures and autistic-like social deficits following neonatal seizures. | Lippman-Bell, Jocelyn J; Rakhade, Sanjay N; Klein, Peter M; Obeid, Makram; Jackson, Michele C; Joseph, Annelise; Jensen, Frances E | Epilepsia | 2013 Nov | 1922-32 | 24117347 |
| The fumagillin gene cluster, an example of hundreds of genes under veA control in Aspergillus fumigatus. | Dhingra, Sourabh; Lind, Abigail L; Lin, Hsiao-Ching; Tang, Yi; Rokas, Antonis; Calvo, Ana M | PloS one | 2013 | e77147 | 24116213 |
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| Reference-free harmonic regression technique to remove EEG-fMRI ballistocardiogram artifacts. | Krishnaswamy, Pavitra; Bonmassar, Giorgio; Purdon, Patrick L; Brown, Emery N | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference | 2013 | 5426-9 | 24110963 |
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| Targeted DNA demethylation and activation of endogenous genes using programmable TALE-TET1 fusion proteins. | Maeder, Morgan L; Angstman, James F; Richardson, Marcy E; Linder, Samantha J; Cascio, Vincent M; Tsai, Shengdar Q; Ho, Quan H; Sander, Jeffry D; Reyon, Deepak; Bernstein, Bradley E; Costello, Joseph F; Wilkinson, Miles F; Joung, J Keith | Nature biotechnology | 2013 Dec | 1137-42 | 24108092 |
| Visualization of synaptic inhibition with an optogenetic sensor developed by cell-free protein engineering automation. | Grimley, Joshua S; Li, Li; Wang, Weina; Wen, Lei; Beese, Lorena S; Hellinga, Homme W; Augustine, George J | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2013 Oct 9 | 16297-309 | 24107961 |
| Inconvenient truths in the pursuit of scientific knowledge and public health. | Relman, David A | The Journal of infectious diseases | 2014 Jan 15 | 170-2 | 24106297 |
| Enhancement of photoacoustic tomography by ultrasonic computed tomography based on optical excitation of elements of a full-ring transducer array. | Xia, Jun; Huang, Chao; Maslov, Konstantin; Anastasio, Mark A; Wang, Lihong V | Optics letters | 2013 Aug 15 | 3140-3 | 24104670 |
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| Photoacoustic recovery after photothermal bleaching in living cells. | Li, Chiye; Zhang, Chi; Gao, Liang; Garcia-Uribe, Alejandro; Wang, Lihong V | Journal of biomedical optics | 2013 | 106004 | 24089253 |
| Gene Expression Profiling of a Hypoxic Seizure Model of Epilepsy Suggests a Role for mTOR and Wnt Signaling in Epileptogenesis. | Theilhaber, Joachim; Rakhade, Sanjay N; Sudhalter, Judy; Kothari, Nayantara; Klein, Peter; Pollard, Jack; Jensen, Frances E | PloS one | 2013 | e74428 | 24086344 |
| Higher 5-hydroxymethylcytosine identifies immortal DNA strand chromosomes in asymmetrically self-renewing distributed stem cells. | Huh, Yang Hoon; Cohen, Justin; Sherley, James L | Proceedings of the National Academy of Sciences of the United States of America | 2013 Oct 15 | 16862-7 | 24082118 |
| Identification of discrete functional subregions of the human periaqueductal gray. | Satpute, Ajay B; Wager, Tor D; Cohen-Adad, Julien; Bianciardi, Marta; Choi, Ji-Kyung; Buhle, Jason T; Wald, Lawrence L; Barrett, Lisa Feldman | Proceedings of the National Academy of Sciences of the United States of America | 2013 Oct 15 | 17101-6 | 24082116 |
| Calibration-free in vivo transverse blood flowmetry based on cross correlation of slow time profiles from photoacoustic microscopy. | Zhou, Yong; Liang, Jinyang; Maslov, Konstantin I; Wang, Lihong V | Optics letters | 2013 Oct 1 | 3882-5 | 24081077 |
| The impact of heterogeneous transmission on the establishment and spread of antimalarial drug resistance. | Klein, Eili Y | Journal of theoretical biology | 2014 Jan 7 | 177-85 | 24076451 |
| Dendritic Glutamate Receptor mRNAs Show Contingent Local Hotspot-Dependent Translational Dynamics. | Kim, Tae Kyung; Sul, Jai-Yoon; Helmfors, Henrik; Langel, Ulo; Kim, Junhyong; Eberwine, James | Cell reports | 2013 Oct 17 | 114-25 | 24075992 |
| Maternal and offspring pools of osteocalcin influence brain development and functions. | Oury, Franck; Khrimian, Lori; Denny, Christine A; Gardin, Antoine; Chamouni, Alexandre; Goeden, Nick; Huang, Yung-yu; Lee, Hojoon; Srinivas, Prashanth; Gao, Xiao-Bing; Suyama, Shigetomo; Langer, Thomas; Mann, John J; Horvath, Tamas L; Bonnin, Alexandre; Karsenty, Gerard | Cell. | 2013 Sep 26; | 228-41 | 24074871 |
| Mitochondrial dynamics controlled by mitofusins regulate Agrp neuronal activity and diet-induced obesity. | Dietrich, Marcelo O; Liu, Zhong-Wu; Horvath, Tamas L | Cell. | 2013 Sep 26; | 188-99 | 24074868 |
| Mitofusin 2 in POMC Neurons Connects ER Stress with Leptin Resistance and Energy Imbalance. | Schneeberger, Marc; Dietrich, Marcelo O; Sebastian, David; Imbernon, Monica; Castano, Carlos; Garcia, Ainhoa; Esteban, Yaiza; Gonzalez-Franquesa, Alba; Rodriguez, Ignacio Castrillon; Bortolozzi, Analia; Garcia-Roves, Pablo M; Gomis, Ramon; Nogueiras, Rube | Cell | 2013 Sep 26 | 172-87 | 24074867 |
| Nanoelectronics-biology frontier: From nanoscopic probes for action potential recording in live cells to three-dimensional cyborg tissues. | Duan, Xiaojie; Fu, Tian-Ming; Liu, Jia; Lieber, Charles M | Nano today | 2013 Aug 1 | 351-373 | 24073014 |
| AMP deaminase 3 deficiency enhanced 5'-AMP induction of hypometabolism. | Daniels, Isadora Susan; O Brien 3rd, William G; Nath, Vinay; Zhao, Zhaoyang; Lee, Cheng Chi | PloS one | 2013 | e75418 | 24066180 |
| Structured-illumination photoacoustic Doppler flowmetry of axial flow in homogeneous scattering media. | Zhang, Ruiying; Yao, Junjie; Maslov, Konstantin I; Wang, Lihong V | Applied physics letters. | 2013 Aug 26; | 94101 | 24065864 |
| Blood spotlight on leukocytes and obesity. | Carvalheira, Jose Barreto Campello; Qiu, Yifu; Chawla, Ajay | Blood | 2013 Nov 7 | 3263-7 | 24065242 |
| Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota. | Kashyap, Purna C; Marcobal, Angela; Ursell, Luke K; Smits, Samuel A; Sonnenburg, Erica D; Costello, Elizabeth K; Higginbottom, Steven K; Domino, Steven E; Holmes, Susan P; Relman, David A; Knight, Rob; Gordon, Jeffrey I; Sonnenburg, Justin L | Proceedings of the National Academy of Sciences of the United States of America | 2013 Oct 15 | 17059-64 | 24062455 |
| Chemical analog-to-digital signal conversion based on robust threshold chemistry and its evaluation in the context of microfluidics-based quantitative assays. | Huynh, Toan; Sun, Bing; Li, Liang; Nichols, Kevin P; Koyner, Jay L; Ismagilov, Rustem F | Journal of the American Chemical Society | 2013 Oct 2 | 14775-83 | 24060606 |
| Live-cell imaging of cytosolic NADH-NAD+ redox state using a genetically encoded fluorescent biosensor. | Hung, Yin Pun; Yellen, Gary | Methods in molecular biology (Clifton, N.J.). | 2014; | 83-95 | 24052382 |
| p53 regulates Period2 expression and the circadian clock. | Miki, Takao; Matsumoto, Tomoko; Zhao, Zhaoyang; Lee, Cheng Chi | Nature communications | 2013 | 2444 | 24051492 |
| Disruption of CEP290 microtubule/membrane-binding domains causes retinal degeneration. | Drivas, Theodore G; Holzbaur, Erika L F; Bennett, Jean | The Journal of clinical investigation. | 2013 Oct; | 4525-39 | 24051377 |
| Developmental Expression of N-Methyl-D-Aspartate (NMDA) Receptor Subunits in Human White and Gray Matter: Potential Mechanism of Increased Vulnerability in the Immature Brain. | Jantzie, Lauren L; Talos, Delia M; Jackson, Michele C; Park, Hyun-Kyung; Graham, Dionne A; Lechpammer, Mirna; Folkerth, Rebecca D; Volpe, Joseph J; Jensen, Frances E | Cerebral cortex (New York, N.Y. : 1991) | 2013 Sep 17 | NULL | 24046081 |
| Type 2 innate lymphoid cells control eosinophil homeostasis. | Nussbaum, Jesse C; Van Dyken, Steven J; von Moltke, Jakob; Cheng, Laurence E; Mohapatra, Alexander; Molofsky, Ari B; Thornton, Emily E; Krummel, Matthew F; Chawla, Ajay; Liang, Hong-Erh; Locksley, Richard M | Nature | 2013 Oct 10 | 245-248 | 24037376 |
| Dampening of expression oscillations by synchronous regulation of a microRNA and its target. | Kim, Dong Hyun; Grun, Dominic; van Oudenaarden, Alexander | Nature genetics | 2013 Sep 15 | NULL | 24036951 |
| 25th anniversary article: galvanic replacement: a simple and versatile route to hollow nanostructures with tunable and well-controlled properties. | Xia, Xiaohu; Wang, Yi; Ruditskiy, Aleksey; Xia, Younan | Advanced materials (Deerfield Beach, Fla.) | 2013 Nov 26 | 6313-33 | 24027074 |
| Noise-equivalent sensitivity of photoacoustics. | Winkler, Amy M; Maslov, Konstantin; Wang, Lihong V | Journal of biomedical optics | 2013 Sep | 97003 | 24026425 |
| Burst suppression probability algorithms: state-space methods for tracking EEG burst suppression. | Chemali, Jessica; Ching, ShiNung; Purdon, Patrick L; Solt, Ken; Brown, Emery N | Journal of neural engineering | 2013 Oct | 56017 | 24018288 |
| Locus-specific editing of histone modifications at endogenous enhancers. | Mendenhall, Eric M; Williamson, Kaylyn E; Reyon, Deepak; Zou, James Y; Ram, Oren; Joung, J Keith; Bernstein, Bradley E | Nature biotechnology | 2013 Dec | 1133-6 | 24013198 |
| Immunology of AAV-Mediated Gene Transfer in the Eye. | Willett, Keirnan; Bennett, Jean | Frontiers in immunology. | 2013; | 24009613 | |
| Cross-correlation-based transverse flow measurements using optical resolution photoacoustic microscopy with a digital micromirror device. | Liang, Jinyang; Zhou, Yong; Maslov, Konstantin I; Wang, Lihong V | Journal of biomedical optics | 2013 Sep | 96004 | 24002191 |
| Nanoparticle SERS substrates with 3D Raman-active volumes. | Stoerzinger, Kelsey A; Lin, Julia Y; Odom, Teri W | Chemical science (Royal Society of Chemistry : 2010) | 2011 Aug 1 | 1435-1439 | 23997929 |
| ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation. | Lin, John Y; Knutsen, Per Magne; Muller, Arnaud; Kleinfeld, David; Tsien, Roger Y | Nature neuroscience | 2013 Oct | 1499-508 | 23995068 |
| Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity. | Ran, F Ann; Hsu, Patrick D; Lin, Chie-Yu; Gootenberg, Jonathan S; Konermann, Silvana; Trevino, Alexandro E; Scott, David A; Inoue, Azusa; Matoba, Shogo; Zhang, Yi; Zhang, Feng | Cell | 2013 Sep 12 | 1380-9 | 23992846 |
| Synaptic state matching: a dynamical architecture for predictive internal representation and feature detection. | Tavazoie, Saeed | PloS one | 2013 | e72865 | 23991161 |
| Production of unnaturally linked chimeric proteins using a combination of sortase-catalyzed transpeptidation and click chemistry. | Witte, Martin D; Theile, Christopher S; Wu, Tongfei; Guimaraes, Carla P; Blom, Annet E M; Ploegh, Hidde L | Nature protocols. | 2013 Sep; | 1808-19 | 23989675 |
| Adaptive translation as a mechanism of stress response and adaptation. | Pan, Tao | Annual review of genetics | 2013 | 121-37 | 23988117 |
| Expanding the scope of site-specific recombinases for genetic and metabolic engineering. | Gaj, Thomas; Sirk, Shannon J; Barbas 3rd, Carlos F | Biotechnology and bioengineering | 2014 Jan | 41654 | 23982993 |
| Expanding the primate body schema in sensorimotor cortex by virtual touches of an avatar. | Shokur, Solaiman; O'Doherty, Joseph E; Winans, Jesse A; Bleuler, Hannes; Lebedev, Mikhail A; Nicolelis, Miguel A L | Proceedings of the National Academy of Sciences of the United States of America | 2013 Sep 10 | 15121-6 | 23980141 |
| Directed evolution of the TALE N-terminal domain for recognition of all 5' bases. | Lamb, Brian M; Mercer, Andrew C; Barbas 3rd, Carlos F | Nucleic acids research | 2013 Nov | 9779-85 | 23980031 |
| Targeted deletion and inversion of tandemly arrayed genes in Arabidopsis thaliana using zinc finger nucleases. | Qi, Yiping; Li, Xiaohong; Zhang, Yong; Starker, Colby G; Baltes, Nicholas J; Zhang, Feng; Sander, Jeffry D; Reyon, Deepak; Joung, J Keith; Voytas, Daniel F | G3 (Bethesda, Md.) | 2013 Oct | 1707-15 | 23979943 |
| Complexity generation in fungal polyketide biosynthesis: a spirocycle-forming P450 in the concise pathway to the antifungal drug griseofulvin. | Cacho, Ralph A; Chooi, Yit-Heng; Zhou, Hui; Tang, Yi | ACS chemical biology | 2013 Oct 18 | 2322-30 | 23978092 |
| Optical-resolution photoacoustic microscopy: auscultation of biological systems at the cellular level. | Hu, Song; Wang, Lihong V | Biophysical journal | 2013 Aug 20 | 841-7 | 23972836 |
| Circadian gene Bmal1 regulates diurnal oscillations of Ly6C(hi) inflammatory monocytes. | Nguyen, Khoa D; Fentress, Sarah J; Qiu, Yifu; Yun, Karen; Cox, Jeffery S; Chawla, Ajay | Science (New York, N.Y.) | 2013 Sep 27 | 1483-8 | 23970558 |
| Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein. | Feldkamp, Michael D; Frank, Andreas O; Kennedy, J Phillip; Patrone, James D; Vangamudi, Bhavatarini; Waterson, Alex G; Fesik, Stephen W; Chazin, Walter J | Biochemistry | 2013 Sep 17 | 6515-24 | 23962067 |
| Microscale polymer bottles corked with a phase-change material for temperature-controlled release. | Hyun, Dong Choon; Lu, Ping; Choi, Sang-Il; Jeong, Unyong; Xia, Younan | Angewandte Chemie (International ed. in English) | 2013 Sep 27 | 10468-71 | 23959631 |
| Neuroscience thinks big (and collaboratively). | Kandel, Eric R; Markram, Henry; Matthews, Paul M; Yuste, Rafael; Koch, Christof | Nature reviews. Neuroscience. | 2013 Sep; | 659-64 | 23958663 |
| Salmonella require the fatty acid regulator PPARýý for the establishment of a metabolic environment essential for long-term persistence. | Eisele, Nicholas A; Ruby, Thomas; Jacobson, Amanda; Manzanillo, Paolo S; Cox, Jeffery S; Lam, Lilian; Mukundan, Lata; Chawla, Ajay; Monack, Denise M | Cell host & microbe | 2013 Aug 14 | 171-82 | 23954156 |
| Nanoelectronics Meets Biology: From New Nanoscale Devices for Live-Cell Recording to 3D Innervated Tissues. | Duan, Xiaojie; Lieber, Charles M | Chemistry, an Asian journal | 2013 Oct | 2304-14 | 23946279 |
| In silico abstraction of zinc finger nuclease cleavage profiles reveals an expanded landscape of off-target sites. | Sander, Jeffry D; Ramirez, Cherie L; Linder, Samantha J; Pattanayak, Vikram; Shoresh, Noam; Ku, Manching; Foden, Jennifer A; Reyon, Deepak; Bernstein, Bradley E; Liu, David R; Joung, J Keith | Nucleic acids research | 2013 Oct | e181 | 23945932 |
| Phospholipase B is activated in response to sterol removal and stimulates acrosome exocytosis in murine sperm. | Asano, Atsushi; Nelson-Harrington, Jacquelyn L; Travis, Alexander J | The Journal of biological chemistry | 2013 Sep 27 | 28104-15 | 23943622 |
| Optical clearing-aided photoacoustic microscopy with enhanced resolution and imaging depth. | Zhou, Yong; Yao, Junjie; Wang, Lihong V | Optics letters | 2013 Jul 15 | 2592-5 | 23939121 |
| Stochastic cytokine expression induces mixed T helper cell States. | Fang, Miaoqing; Xie, Huangming; Dougan, Stephanie K; Ploegh, Hidde; van Oudenaarden, Alexander | PLoS biology | 2013 Jul | e1001618 | 23935453 |
| Allele-specific detection of single mRNA molecules in situ. | Hansen, Clinton H; van Oudenaarden, Alexander | Nature methods | 2013 Aug 11 | NULL | 23934076 |
| Efficient preloading of the ventricles by a properly timed atrial contraction underlies stroke work improvement in the acute response to cardiac resynchronization therapy. | Hu, Yuxuan; Gurev, Viatcheslav; Constantino, Jason; Trayanova, Natalia | Heart rhythm : the official journal of the Heart Rhythm Society. | 2013 Dec; | 1800-6 | 23928177 |
| RNA Replicon Delivery via Lipid-Complexed PRINT Protein Particles. | Xu, Jing; Luft, J Christopher; Yi, Xianwen; Tian, Shaomin; Owens, Gary; Wang, Jin; Johnson, Ashley; Berglund, Peter; Smith, Jonathan; Napier, Mary E; Desimone, Joseph M | Molecular pharmaceutics | 2013 Aug 21 | NULL | 23924216 |
| Conceptualizing and experiencing compassion. | Condon, Paul; Feldman Barrett, Lisa | Emotion (Washington, D.C.) | 2013 Oct | 817-21 | 23914766 |
| Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A. | Patrone, James D; Kennedy, J Phillip; Frank, Andreas O; Feldkamp, Michael D; Vangamudi, Bhavatarini; Pelz, Nicholas F; Rossanese, Olivia W; Waterson, Alex G; Chazin, Walter J; Fesik, Stephen W | ACS medicinal chemistry letters | 2013 Jul 11 | 601-605 | 23914285 |
| Spinal projection neurons control turning behaviors in zebrafish. | Huang, Kuo-Hua; Ahrens, Misha B; Dunn, Timothy W; Engert, Florian | Current biology : CB | 2013 Aug 19 | 1566-73 | 23910662 |
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| Expression of Isl1 during mouse development. | Zhuang, Shaowei; Zhang, Qingquan; Zhuang, Tao; Evans, Sylvia M; Liang, Xingqun; Sun, Yunfu | Gene expression patterns : GEP | 2013 Jul 29 | 407-412 | 23906961 |
| Microbiota's 'little helpers': bacteriophages and antibiotic-associated responses in the gut microbiome. | Sun, Christine L; Relman, David A | Genome biology. | 2013; | 127 | 23906048 |
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| Calibration-free quantification of absolute oxygen saturation based on the dynamics of photoacoustic signals. | Xia, Jun; Danielli, Amos; Liu, Yan; Wang, Lidai; Maslov, Konstantin; Wang, Lihong V | Optics letters | 2013 Aug 1 | 2800-3 | 23903146 |
| Random-access optical-resolution photoacoustic microscopy using a digital micromirror device. | Liang, Jinyang; Zhou, Yong; Winkler, Amy W; Wang, Lidai; Maslov, Konstantin I; Li, Chiye; Wang, Lihong V | Optics letters | 2013 Aug 1 | 2683-6 | 23903111 |
| Rapidly-dissolvable microneedle patches via a highly scalable and reproducible soft lithography approach. | Moga, Katherine A; Bickford, Lissett R; Geil, Robert D; Dunn, Stuart S; Pandya, Ashish A; Wang, Yapei; Fain, John H; Archuleta, Christine F; O'Neill, Adrian T; Desimone, Joseph M | Advanced materials (Deerfield Beach, Fla.) | 2013 Sep 25 | 5060-6 | 23893866 |
| CRISPR RNA-guided activation of endogenous human genes. | Maeder, Morgan L; Linder, Samantha J; Cascio, Vincent M; Fu, Yanfang; Ho, Quan H; Joung, J Keith | Nature methods | 2013 Oct | 977-9 | 23892898 |
| Real-time segmentation of burst suppression patterns in critical care EEG monitoring. | Brandon Westover, M; Shafi, Mouhsin M; Ching, Shinung; Chemali, Jessica J; Purdon, Patrick L; Cash, Sydney S; Brown, Emery N | Journal of neuroscience methods | 2013 Sep 30 | 131-41 | 23891828 |
| Local cortical dynamics of burst suppression in the anaesthetized brain. | Lewis, Laura D; Ching, Shinung; Weiner, Veronica S; Peterfreund, Robert A; Eskandar, Emad N; Cash, Sydney S; Brown, Emery N; Purdon, Patrick L | Brain : a journal of neurology | 2013 Sep | 2727-37 | 23887187 |
| Deep-tissue photoacoustic tomography of Forster resonance energy transfer. | Wang, Yu; Xia, Jun; Wang, Lihong V | Journal of biomedical optics | 2013 | 101316 | 23884608 |
| Optical control of mammalian endogenous transcription and epigenetic states. | Konermann, Silvana; Brigham, Mark D; Trevino, Alexandro E; Hsu, Patrick D; Heidenreich, Matthias; Cong, Le; Platt, Randall J; Scott, David A; Church, George M; Zhang, Feng | Nature | 2013 Aug 22 | 472-6 | 23877069 |
| Heritable and precise zebrafish genome editing using a CRISPR-Cas system. | Hwang, Woong Y; Fu, Yanfang; Reyon, Deepak; Maeder, Morgan L; Kaini, Prakriti; Sander, Jeffry D; Joung, J Keith; Peterson, Randall T; Yeh, Jing-Ruey Joanna | PloS one | 2013 | e68708 | 23874735 |
| An enzyme that inactivates the inflammatory mediator leukotriene b4 restricts mycobacterial infection. | Tobin, David M; Roca, Francisco J; Ray, John P; Ko, Dennis C; Ramakrishnan, Lalita | PloS one | 2013 | e67828 | 23874453 |
| DNA targeting specificity of RNA-guided Cas9 nucleases. | Hsu, Patrick D; Scott, David A; Weinstein, Joshua A; Ran, F Ann; Konermann, Silvana; Agarwala, Vineeta; Li, Yinqing; Fine, Eli J; Wu, Xuebing; Shalem, Ophir; Cradick, Thomas J; Marraffini, Luciano A; Bao, Gang; Zhang, Feng | Nature biotechnology | 2013 Sep | 827-32 | 23873081 |
| Coordination of heart and lung co-development by a multipotent cardiopulmonary progenitor. | Peng, Tien; Tian, Ying; Boogerd, Cornelis J; Lu, Min Min; Kadzik, Rachel S; Stewart, Kathleen M; Evans, Sylvia M; Morrisey, Edward E | Nature | 2013 Aug 29 | 589-92 | 23873040 |
| Structure prediction of partial-length protein sequences. | Laurenzi, Adrian; Hung, Ling-Hong; Samudrala, Ram | International journal of molecular sciences | 2013 | 14892-907 | 23867606 |
| Heparan sulfate proteoglycans containing a glypican 5 core and 2-O-sulfo-iduronic acid function as Sonic Hedgehog co-receptors to promote proliferation. | Witt, Rochelle M; Hecht, Marie-Lyn; Pazyra-Murphy, Maria F; Cohen, Samuel M; Noti, Christian; van Kuppevelt, Toin H; Fuller, Maria; Chan, Jennifer A; Hopwood, John J; Seeberger, Peter H; Segal, Rosalind A | The Journal of biological chemistry | 2013 Sep 6 | 26275-88 | 23867465 |
| A coaxial optrode as multifunction write-read probe for optogenetic studies in non-human primates. | Ozden, Ilker; Wang, Jing; Lu, Yao; May, Travis; Lee, Joonhee; Goo, Werapong; O'Shea, Daniel J; Kalanithi, Paul; Diester, Ilka; Diagne, Mohamed; Deisseroth, Karl; Shenoy, Krishna V; Nurmikko, Arto V | Journal of neuroscience methods | 2013 Sep 30 | 142-54 | 23867081 |
| RNA interference knockdown of DNA methyl-transferase 3 affects gene alternative splicing in the honey bee. | Li-Byarlay, Hongmei; Li, Yang; Stroud, Hume; Feng, Suhua; Newman, Thomas C; Kaneda, Megan; Hou, Kirk K; Worley, Kim C; Elsik, Christine G; Wickline, Samuel A; Jacobsen, Steven E; Ma, Jian; Robinson, Gene E | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jul 30 | 12750-5 | 23852726 |
| A neurodegeneration-specific gene-expression signature of acutely isolated microglia from an amyotrophic lateral sclerosis mouse model. | Chiu, Isaac M; Morimoto, Emiko T A; Goodarzi, Hani; Liao, Jennifer T; O'Keeffe, Sean; Phatnani, Hemali P; Muratet, Michael; Carroll, Michael C; Levy, Shawn; Tavazoie, Saeed; Myers, Richard M; Maniatis, Tom | Cell reports | 2013 Jul 25 | 385-401 | 23850290 |
| Modular use of peripheral input channels tunes motion-detecting circuitry. | Silies, Marion; Gohl, Daryl M; Fisher, Yvette E; Freifeld, Limor; Clark, Damon A; Clandinin, Thomas R | Neuron | 2013 Jul 10 | 111-27 | 23849199 |
| TB: the Yin and Yang of lipid mediators. | Tobin, David M; Ramakrishnan, Lalita | Current opinion in pharmacology | 2013 Aug | 641-5 | 23849093 |
| Dysbiosis of the gut microbiota is associated with hiv disease progression and tryptophan catabolism. | Vujkovic-Cvijin, Ivan; Dunham, Richard M; Iwai, Shoko; Maher, Michael C; Albright, Rebecca G; Broadhurst, Mara J; Hernandez, Ryan D; Lederman, Michael M; Huang, Yong; Somsouk, Ma; Deeks, Steven G; Hunt, Peter W; Lynch, Susan V; McCune, Joseph M | Science translational medicine | 2013 Jul 10 | 193ra91 | 23843452 |
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| High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells. | Fu, Yanfang; Foden, Jennifer A; Khayter, Cyd; Maeder, Morgan L; Reyon, Deepak; Joung, J Keith; Sander, Jeffry D | Nature biotechnology | 2013 Jun 23 | NULL | 23792628 |
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| Real-time Closed-loop Control in a Rodent Model of Medically Induced Coma Using Burst Suppression. | Ching, Shinung; Liberman, Max Y; Chemali, Jessica J; Westover, M Brandon; Kenny, Jonathan; Solt, Ken; Purdon, Patrick L; Brown, Emery N | Anesthesiology | 2013 Jun 13 | NULL | 23770601 |
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| Specific kinematics and motor-related neurons for aversive chemotaxis in Drosophila. | Gao, Xiaojing J; Potter, Christopher J; Gohl, Daryl M; Silies, Marion; Katsov, Alexander Y; Clandinin, Thomas R; Luo, Liqun | Current biology : CB | 2013 Jul 8 | 1163-72 | 23770185 |
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| Discovery of Cryptic Polyketide Metabolites from Dermatophytes Using Heterologous Expression in Aspergillus nidulans. | Yin, Wen-Bing; Chooi, Yit Heng; Smith, Adam R; Cacho, Ralph A; Hu, Youcai; White, Theodore C; Tang, Yi | ACS synthetic biology | 2013 Jun 11 | 23758576 | |
| Computational analysis of anti-HIV-1 antibody neutralization panel data to identify potential functional epitope residues. | West Jr, Anthony P; Scharf, Louise; Horwitz, Joshua; Klein, Florian; Nussenzweig, Michel C; Bjorkman, Pamela J | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jun 10 | 23754383 | |
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| Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome. | Modi, Sheetal R; Lee, Henry H; Spina, Catherine S; Collins, James J | Nature | 2013 Jun 9 | NULL | 23748443 |
| A closed-loop anesthetic delivery system for real-time control of burst suppression. | Liberman, Max Y; Ching, Shinung; Chemali, Jessica; Brown, Emery N | Journal of neural engineering | 2013 Aug | 46004 | 23744607 |
| HCN4 dynamically marks the first heart field and conduction system precursors. | Liang, Xingqun; Wang, Gang; Lin, Lizhu; Lowe, Jennifer; Zhang, Qingquan; Bu, Lei; Chen, Yihan; Chen, Ju; Sun, Yunfu; Evans, Sylvia M | Circulation research | 2013 Aug 2 | 399-407 | 23743334 |
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| Eosinophils secrete IL-4 to facilitate liver regeneration. | Goh, Y P Sharon; Henderson, Neil C; Heredia, Jose E; Red Eagle, Alex; Odegaard, Justin I; Lehwald, Nadja; Nguyen, Khoa D; Sheppard, Dean; Mukundan, Lata; Locksley, Richard M; Chawla, Ajay | Proceedings of the National Academy of Sciences of the United States of America | 2013 Jun 11 | 9914-9 | 23716700 |
| A Reactive Oxygen Species (ROS)-Responsive Polymer for Safe, Efficient, and Targeted Gene Delivery in Cancer Cells. | Shim, Min Suk; Xia, Younan | Angewandte Chemie (International ed. in English) | 2013 Jul 1 | 6926-9 | 23716349 |
| Untangling the web: the diverse functions of the PIWI/piRNA pathway. | Mani, Sneha Ramesh; Juliano, Celina E | Molecular reproduction and development | 2013 Aug | 632-64 | 23712694 |
| The roles of monkey M1 neuron classes in movement preparation and execution. | Kaufman, Matthew T; Churchland, Mark M; Shenoy, Krishna V | Journal of neurophysiology | 2013 Aug | 817-25 | 23699057 |
| Connection between Oligomeric State and Gating Characteristics of Mechanosensitive Ion Channels. | Haselwandter, Christoph A; Phillips, Rob | PLoS computational biology | 2013 May | e1003055 | 23696720 |
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| Perfusion Imaging of Focal Cortical Dysplasia Using Arterial Spin Labeling: Correlation With Histopathological Vascular Density. | Wintermark, Pia; Lechpammer, Mirna; Warfield, Simon K; Kosaras, Bela; Takeoka, Masanori; Poduri, Annapurna; Madsen, Joseph R; Bergin, Ann M; Whalen, Stephen; Jensen, Frances E | Journal of child neurology | 2013 Nov | 1474-1482 | 23696629 |
| Evolutionary dynamics and information hierarchies in biological systems. | Walker, Sara Imari; Callahan, Benjamin J; Arya, Gaurav; Barry, J David; Bhattacharya, Tanmoy; Grigoryev, Sergei; Pellegrini, Matteo; Rippe, Karsten; Rosenberg, Susan M | Annals of the New York Academy of Sciences | 2013 May 20 | 23691975 | |
| Fragment-based drug discovery using NMR spectroscopy. | Harner, Mary J; Frank, Andreas O; Fesik, Stephen W | Journal of biomolecular NMR | 2013 May 18 | 23686385 | |
| Comparative analysis of RNA sequencing methods for degraded or low-input samples. | Adiconis, Xian; Borges-Rivera, Diego; Satija, Rahul; Deluca, David S; Busby, Michele A; Berlin, Aaron M; Sivachenko, Andrey; Thompson, Dawn Anne; Wysoker, Alec; Fennell, Timothy; Gnirke, Andreas; Pochet, Nathalie; Regev, Aviv; Levin, Joshua Z | Nature methods | 2013 May 19 | 23685885 | |
| Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells. | Shalek, Alex K; Satija, Rahul; Adiconis, Xian; Gertner, Rona S; Gaublomme, Jellert T; Raychowdhury, Raktima; Schwartz, Schraga; Yosef, Nir; Malboeuf, Christine; Lu, Diana; Trombetta, John J; Gennert, Dave; Gnirke, Andreas; Goren, Alon; Hacohen, Nir; Levin | Nature | 2013 Jun 13 | 236-40 | 23685454 |
| An unsolved mystery: The target-recognizing RNA species of microRNA genes. | Chen, Chang-Zheng | Biochimie | 2013 May 14 | 23685275 | |
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| Activity-dependent gene expression in honey bee mushroom bodies in response to orientation flight. | Lutz, Claudia C; Robinson, Gene E | The Journal of experimental biology | 2013 Jun 1 | 2031-8 | 23678099 |
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| Sexually dimorphic neurons in the ventromedial hypothalamus govern mating in both sexes and aggression in males. | Yang, Cindy F; Chiang, Michael C; Gray, Daniel C; Prabhakaran, Mahalakshmi; Alvarado, Maricruz; Juntti, Scott A; Unger, Elizabeth K; Wells, James A; Shah, Nirao M | Cell | 2013 May 9 | 896-909 | 23663785 |
| Short pathways to complexity generation: fungal peptidyl alkaloid multicyclic scaffolds from anthranilate building blocks. | Walsh, Christopher T; Haynes, Stuart W; Ames, Brian D; Gao, Xue; Tang, Yi | ACS chemical biology. | 2013 Jul 19; | 1366-82 | 23659680 |
| IL-7 production in murine lymphatic endothelial cells and induction in the setting of peripheral lymphopenia. | Miller, Corey N; Hartigan-O'Connor, Dennis J; Lee, Myeong Sup; Laidlaw, Grace; Cornelissen, Ivo P; Matloubian, Mehrdad; Coughlin, Shaun R; McDonald, Donald M; McCune, Joseph M | International immunology | 2013 Aug | 471-83 | 23657000 |
| Novel synthetic medea selfish genetic elements drive population replacement in Drosophila; a theoretical exploration of medea-dependent population suppression. | Akbari, Omar S; Chen, Chun-Hong; Marshall, John M; Huang, Haixia; Antoshechkin, Igor; Hay, Bruce A | ACS synthetic biology. | 2014 Dec 19; | 915-28 | 23654248 |
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| Patterns of nucleotide and haplotype diversity at ICAM-1 across global human populations with varying levels of malaria exposure. | Gomez, Felicia; Tomas, Gil; Ko, Wen-Ya; Ranciaro, Alessia; Froment, Alain; Ibrahim, Muntaser; Lema, Godfrey; Nyambo, Thomas B; Omar, Sabah A; Wambebe, Charles; Hirbo, Jibril B; Rocha, Jorge; Tishkoff, Sarah A | Human genetics | 2013 Sep | 987-99 | 23609612 |
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| The Glove-like Structure of the Conserved Membrane Protein TatC Provides Insight into Signal Sequence Recognition in Twin-Arginine Translocation. | Ramasamy, Sureshkumar; Abrol, Ravinder; Suloway, Christian J M; Clemons Jr, William M | Structure (London, England : 1993) | 2013 May 7 | 777-88 | 23583035 |
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| Monitoring of post-translational modification dynamics with genetically encoded fluorescent reporters. | Hertel, Fabian; Zhang, Jin | Biopolymers | 2013 Apr 10 | NULL | 23576192 |
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| Design, construction, and validation of a modular library of sequence diversity standards for polymerase chain reaction. | Baum, Paul D; Young, Jennifer J; Zhang, Qianjun; Kasakow, Zeljka; McCune, Joseph M | Analytical biochemistry | 2011 Apr 1 | 106-15 | 21111699 |
| The Yb body, a major site for Piwi-associated RNA biogenesis and a gateway for Piwi expression and transport to the nucleus in somatic cells. | Qi, Hongying; Watanabe, Toshiaki; Ku, Hsueh-Yen; Liu, Na; Zhong, Mei; Lin, Haifan | The Journal of biological chemistry | 2011 Feb 4 | 3789-97 | 21106531 |
| Tunable bifunctional silyl ether cross-linkers for the design of acid-sensitive biomaterials. | Parrott, Matthew C; Luft, J Chris; Byrne, James D; Fain, John H; Napier, Mary E; Desimone, Joseph M | Journal of the American Chemical Society | 2010 Dec 22 | 17928-32 | 21105720 |
| Signaling diversity of PKA achieved via a Ca2+-cAMP-PKA oscillatory circuit. | Ni, Qiang; Ganesan, Ambhighainath; Aye-Han, Nwe-Nwe; Gao, Xinxin; Allen, Michael D; Levchenko, Andre; Zhang, Jin | Nature chemical biology | 2011 Jan | 34-40 | 21102470 |
| Low-dimensional neural features predict muscle EMG signals. | Rivera-Alvidrez, Zuley; Kalmar, Rachel S; Ryu, Stephen I; Shenoy, Krishna V | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2010 | 6027-33 | 21097116 |
| A differential autoregressive modeling approach within a point process framework for non-stationary heartbeat intervals analysis. | Chen, Zhe; Purdon, Patrick L; Brown, Emery N; Barbieri, Riccardo | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2010 | 3567-70 | 21096829 |
| Psychophysiological signals associated with affective states. | Mauri, Maurizio; Magagnin, Valentina; Cipresso, Pietro; Mainardi, Luca; Brown, Emery N; Cerutti, Sergio; Villamira, Marco; Barbieri, Riccardo | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2010 | 3563-6 | 21096828 |
| The Fitzhugh-Nagumo model: Firing modes with time-varying parameters & parameter estimation. | Faghih, Rose T; Savla, Ketan; Dahleh, Munther A; Brown, Emery N | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2010 | 4116-9 | 21096631 |
| Point process time-frequency analysis of respiratory sinus arrhythmia under altered respiration dynamics. | Kodituwakku, Sandun; Lazar, Sara W; Indic, Premananda; Brown, Emery N; Barbieri, Riccardo | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference | 2010 | 1622-5 | 21096135 |
| Three-dimensional scaffolds for tissue engineering: the importance of uniformity in pore size and structure. | Choi, Sung-Wook; Zhang, Yu; Xia, Younan | Langmuir : the ACS journal of surfaces and colloids | 2010 Dec 21 | 19001-6 | 21090781 |
| Semele: a killer-male, rescue-female system for suppression and replacement of insect disease vector populations. | Marshall, John M; Pittman, Geoffrey W; Buchman, Anna B; Hay, Bruce A | Genetics | 2011 Feb | 535-51 | 21078687 |
| Efficient decoding with steady-state Kalman filter in neural interface systems. | Malik, Wasim Q; Truccolo, Wilson; Brown, Emery N; Hochberg, Leigh R | IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society | 2011 Feb | 25-34 | 21078582 |
| Inorganic nanoparticle-based contrast agents for molecular imaging. | Cho, Eun Chul; Glaus, Charles; Chen, Jingyi; Welch, Michael J; Xia, Younan | Trends in molecular medicine | 2010 Dec | 561-73 | 21074494 |
| Lynx1, a cholinergic brake, limits plasticity in adult visual cortex. | Morishita, Hirofumi; Miwa, Julie M; Heintz, Nathaniel; Hensch, Takao K | Science (New York, N.Y.) | 2010 Nov 26 | 1238-40 | 21071629 |
| Medea selfish genetic elements as tools for altering traits of wild populations: a theoretical analysis. | Ward, Catherine M; Su, Jessica T; Huang, Yunxin; Lloyd, Alun L; Gould, Fred; Hay, Bruce A | Evolution; international journal of organic evolution | 2011 Apr | 1149-62 | 21062278 |
| Thermodynamic analysis of ligand-induced changes in protein thermal unfolding applied to high-throughput determination of ligand affinities with extrinsic fluorescent dyes. | Layton, Curtis J; Hellinga, Homme W | Biochemistry | 2010 Dec 28 | 10831-41 | 21050007 |
| Predicting success of oligomerized pool engineering (OPEN) for zinc finger target site sequences. | Sander, Jeffry D; Reyon, Deepak; Maeder, Morgan L; Foley, Jonathan E; Thibodeau-Beganny, Stacey; Li, Xiaohong; Regan, Maureen R; Dahlborg, Elizabeth J; Goodwin, Mathew J; Fu, Fengli; Voytas, Daniel F; Joung, J Keith; Dobbs, Drena | BMC bioinformatics | 2010 | 543 | 21044337 |
| Running hot and cold: behavioral strategies, neural circuits, and the molecular machinery for thermotaxis in C. elegans and Drosophila. | Garrity, Paul A; Goodman, Miriam B; Samuel, Aravinthan D; Sengupta, Piali | Genes & development | 2010 Nov 1 | 2365-82 | 21041406 |
| Cortical preparatory activity: representation of movement or first cog in a dynamical machine? | Churchland, Mark M; Cunningham, John P; Kaufman, Matthew T; Ryu, Stephen I; Shenoy, Krishna V | Neuron | 2010 Nov 4 | 387-400 | 21040842 |
| Alternative macrophage activation and metabolism. | Odegaard, Justin I; Chawla, Ajay | Annual review of pathology | 2011 | 275-97 | 21034223 |
| Living the high life: high-altitude adaptation. | Scheinfeldt, Laura B; Tishkoff, Sarah A | Genome biology | 2010 | 133 | 20979669 |
| A ''window of opportunity:'' the reduction of coronary heart disease and total mortality with menopausal therapies is age- and time-dependent. | Hodis, Howard N; Mack, Wendy J | Brain research. | 2011 Mar 16; | 244-52 | 20977895 |
| Age of diagnosis for autism: individual and community factors across 10 birth cohorts. | Fountain, Christine; King, Marissa D; Bearman, Peter S | Journal of epidemiology and community health | 2011 Jun | 503-10 | 20974836 |
| Movement, technology and discovery in the zebrafish. | McLean, David L; Fetcho, Joseph R | Current opinion in neurobiology | 2011 Feb | 110-5 | 20970321 |
| Control of masculinization of the brain and behavior. | Wu, Melody V; Shah, Nirao M | Current opinion in neurobiology | 2011 Feb | 116-23 | 20970320 |
| Chronic optical access through a polished and reinforced thinned skull. | Drew, Patrick J; Shih, Andy Y; Driscoll, Jonathan D; Knutsen, Per Magne; Blinder, Pablo; Davalos, Dimitrios; Akassoglou, Katerina; Tsai, Philbert S; Kleinfeld, David | Nature methods. | 2010 Dec; | 981-4 | 20966916 |
| SmashCell: a software framework for the analysis of single-cell amplified genome sequences. | Harrington, Eoghan D; Arumugam, Manimozhiyan; Raes, Jeroen; Bork, Peer; Relman, David A | Bioinformatics (Oxford, England) | 2010 Dec 1 | 2979-80 | 20966005 |
| The aging stress response. | Haigis, Marcia C; Yankner, Bruce A | Molecular cell | 2010 Oct 22 | 333-44 | 20965426 |
| Au@Ag core-shell nanocubes with finely tuned and well-controlled sizes, shell thicknesses, and optical properties. | Ma, Yanyun; Li, Weiyang; Cho, Eun Chul; Li, Zhiyuan; Yu, Taekyung; Zeng, Jie; Xie, Zhaoxiong; Xia, Younan | ACS nano | 2010 Nov 23 | 6725-34 | 20964400 |
| Passenger mutations as a marker of clonal cell lineages in emerging neoplasia. | Salk, Jesse J; Horwitz, Marshall S | Seminars in cancer biology | 2010 Oct | 294-303 | 20951806 |
| Nuclear size is regulated by importin ýý and Ntf2 in Xenopus. | Levy, Daniel L; Heald, Rebecca | Cell | 2010 Oct 15 | 288-98 | 20946986 |
| Reconstructing gene histories in Ascomycota fungi. | Wapinski, Ilan; Regev, Aviv | Methods in enzymology | 2010 | 447-85 | 20946821 |
| Dynamic assessment of baroreflex control of heart rate during induction of propofol anesthesia using a point process method. | Chen, Zhe; Purdon, Patrick L; Harrell, Grace; Pierce, Eric T; Walsh, John; Brown, Emery N; Barbieri, Riccardo | Annals of biomedical engineering | 2011 Jan | 260-76 | 20945159 |
| A closed-loop human simulator for investigating the role of feedback control in brain-machine interfaces. | Cunningham, John P; Nuyujukian, Paul; Gilja, Vikash; Chestek, Cindy A; Ryu, Stephen I; Shenoy, Krishna V | Journal of neurophysiology | 2011 Apr | 1932-49 | 20943945 |
| Statistical inference for assessing functional connectivity of neuronal ensembles with sparse spiking data. | Chen, Zhe; Putrino, David F; Ghosh, Soumya; Barbieri, Riccardo; Brown, Emery N | IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society | 2011 Apr | 121-35 | 20937583 |
| Biocompatibility and Reduced Drug Absorption of Sol-Gel-Treated Poly(dimethyl siloxane) for Microfluidic Cell Culture Applications. | Gomez-Sjoberg, Rafael; Leyrat, Anne A; Houseman, Benjamin T; Shokat, Kevan; Quake, Stephen R | Analytical chemistry | 2010 Oct 11 | 20936785 | |
| Imaging activity-dependent regulation of neurexin-neuroligin interactions using trans-synaptic enzymatic biotinylation. | Thyagarajan, Amar; Ting, Alice Y | Cell | 2010 Oct 29 | 456-69 | 20933261 |
| A general mechanism for network-dosage compensation in gene circuits. | Acar, Murat; Pando, Bernardo F; Arnold, Frances H; Elowitz, Michael B; van Oudenaarden, Alexander | Science (New York, N.Y.) | 2010 Sep 24 | 1656-60 | 20929850 |
| The CRAC channel activator STIM1 binds and inhibits L-type voltage-gated calcium channels. | Park, Chan Young; Shcheglovitov, Aleksandr; Dolmetsch, Ricardo | Science (New York, N.Y.) | 2010 Oct 1 | 101-5 | 20929812 |
| Naive human T cells are activated and proliferate in response to the heme oxygenase-1 inhibitor tin mesoporphyrin. | Burt, Trevor D; Seu, Lillian; Mold, Jeffrey E; Kappas, Attallah; McCune, Joseph M | Journal of immunology (Baltimore, Md. : 1950) | 2010 Nov 1 | 5279-88 | 20921523 |
| In obesity and weight loss, all roads lead to the mighty macrophage. | Red Eagle, Alex; Chawla, Ajay | The Journal of clinical investigation | 2010 Oct | 3437-40 | 20877005 |
| Selective degradation of aggregate-prone CryAB mutants by HSPB1 is mediated by ubiquitin-proteasome pathways. | Zhang, Huali; Rajasekaran, Namakkal S; Orosz, Andras; Xiao, Xianzhong; Rechsteiner, Martin; Benjamin, Ivor J | Journal of molecular and cellular cardiology | 2010 Dec | 918-30 | 20863832 |
| Cellular response of polyvalent oligonucleotide-gold nanoparticle conjugates. | Massich, Matthew D; Giljohann, David A; Schmucker, Abrin L; Patel, Pinal C; Mirkin, Chad A | ACS nano | 2010 Oct 26 | 5641-6 | 20860397 |
| Using light to control signaling cascades in live neurons. | Rana, Anshul; Dolmetsch, Ricardo E | Current opinion in neurobiology | 2010 Oct | 617-22 | 20850295 |
| Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation. | Dethlefsen, Les; Relman, David A | Proceedings of the National Academy of Sciences of the United States of America | 2011 Mar 15 | 4554-61 | 20847294 |
| Broadband plasmonic microlenses based on patches of nanoholes. | Gao, Hanwei; Hyun, Jerome K; Lee, Min Hyung; Yang, Jiun-Chan; Lauhon, Lincoln J; Odom, Teri W | Nano letters | 2010 Oct 13 | 4111-6 | 20839781 |
| A temperature-sensitive drug release system based on phase-change materials. | Choi, Sung-Wook; Zhang, Yu; Xia, Younan | Angewandte Chemie (International ed. in English) | 2010 Oct 18 | 7904-8 | 20839209 |
| A zyxin-mediated mechanism for actin stress fiber maintenance and repair. | Smith, Mark A; Blankman, Elizabeth; Gardel, Margaret L; Luettjohann, Laura; Waterman, Clare M; Beckerle, Mary C | Developmental cell | 2010 Sep 14 | 365-76 | 20833360 |
| Impact of delay in asthma diagnosis on health care service use. | Lynch, Brian A; Van Norman, Chelsey A; Jacobson, Robert M; Weaver, Amy L; Juhn, Young J | Allergy and asthma proceedings : the official journal of regional and state allergy societies. | 2010 Jul-Aug; | e48-e52 | 20819315 |
| Characterization of the proteomes associating with three distinct membrane raft sub-types in murine sperm. | Asano, Atsushi; Nelson, Jacquelyn L; Zhang, Sheng; Travis, Alexander J | Proteomics | 2010 Oct | 3494-505 | 20815087 |
| Bacterial charity work leads to population-wide resistance. | Lee, Henry H; Molla, Michael N; Cantor, Charles R; Collins, James J | Nature | 2010 Sep 2 | 82-5 | 20811456 |
| The potential functions of primary microRNAs in target recognition and repression. | Trujillo, Robin Deis; Yue, Si-Biao; Tang, Yujie; O'Gorman, William E; Chen, Chang-Zheng | The EMBO journal | 2010 Oct 6 | 3272-85 | 20808284 |
| Transcription by the numbers redux: experiments and calculations that surprise. | Garcia, Hernan G; Sanchez, Alvaro; Kuhlman, Thomas; Kondev, Jane; Phillips, Rob | Trends in cell biology | 2010 Dec | 723-33 | 20801657 |
| Strand-specific RNA sequencing reveals extensive regulated long antisense transcripts that are conserved across yeast species. | Yassour, Moran; Pfiffner, Jenna; Levin, Joshua Z; Adiconis, Xian; Gnirke, Andreas; Nusbaum, Chad; Thompson, Dawn-Anne; Friedman, Nir; Regev, Aviv | Genome biology | 2010 | R87 | 20796282 |
| Nanoelectromechanical resonator arrays for ultrafast, gas-phase chromatographic chemical analysis. | Li, Mo; Myers, E B; Tang, H X; Aldridge, S J; McCaig, H C; Whiting, J J; Simonson, R J; Lewis, N S; Roukes, M L | Nano letters | 2010 Oct 13 | 3899-903 | 20795729 |
| In vivo molecular photoacoustic tomography of melanomas targeted by bioconjugated gold nanocages. | Kim, Chulhong; Cho, Eun Chul; Chen, Jingyi; Song, Kwang Hyun; Au, Leslie; Favazza, Christopher; Zhang, Qiang; Cobley, Claire M; Gao, Feng; Xia, Younan; Wang, Lihong V | ACS nano | 2010 Aug 24 | 4559-64 | 20731439 |
| Probing the micelle-bound aggregation-prone state of ýý-synuclein with (19)F NMR spectroscopy. | Wang, Gui-Fang; Li, Conggang; Pielak, Gary J | Chembiochem : a European journal of chemical biology | 2010 Sep 24 | 1993-6 | 20730847 |
| Conserved F-actin dynamics and force transmission at cell adhesions. | Maruthamuthu, Venkat; Aratyn-Schaus, Yvonne; Gardel, Margaret L | Current opinion in cell biology | 2010 Oct | 583-8 | 20728328 |
| Chronic label-free volumetric photoacoustic microscopy of melanoma cells in three-dimensional porous scaffolds. | Zhang, Yu; Cai, Xin; Choi, Sung-Wook; Kim, Chulhong; Wang, Lihong V; Xia, Younan | Biomaterials | 2010 Nov | 8651-8 | 20727581 |
| Multifactorial determinants of protein expression in prokaryotic open reading frames. | Allert, Malin; Cox, J Colin; Hellinga, Homme W | Journal of molecular biology | 2010 Oct 8 | 905-18 | 20727358 |
| Just-so Stories: Vaccines, Autism, and the Single-bullet Disorder. | Bearman, Peter | Social psychology quarterly. | 2009 Jun; | 112-115 | 20721312 |
| Complex function by design using spatially pre-structured synthetic microbial communities: degradation of pentachlorophenol in the presence of Hg(ii). | Kim, Hyun Jung; Du, Wenbin; Ismagilov, Rustem F | Integrative biology : quantitative biosciences from nano to macro | 2011 Feb | 126-33 | 20717565 |
| Autonomous zinc-finger nuclease pairs for targeted chromosomal deletion. | Sollu, Cem; Pars, Kaweh; Cornu, Tatjana I; Thibodeau-Beganny, Stacey; Maeder, Morgan L; Joung, J Keith; Heilbronn, Regine; Cathomen, Toni | Nucleic acids research | 2010 Dec | 8269-76 | 20716517 |
| Tracking, tuning, and terminating microbial physiology using synthetic riboregulators. | Callura, Jarred M; Dwyer, Daniel J; Isaacs, Farren J; Cantor, Charles R; Collins, James J | Proceedings of the National Academy of Sciences of the United States of America | 2010 Sep 7 | 15898-903 | 20713708 |
| Ion-dependent dynamics of DNA ejections for bacteriophage lambda. | Wu, David; Van Valen, David; Hu, Qicong; Phillips, Rob | Biophysical journal | 2010 Aug 9 | 1101-9 | 20712993 |
| Comprehensive comparative analysis of strand-specific RNA sequencing methods. | Levin, Joshua Z; Yassour, Moran; Adiconis, Xian; Nusbaum, Chad; Thompson, Dawn Anne; Friedman, Nir; Gnirke, Andreas; Regev, Aviv | Nature methods | 2010 Sep | 709-15 | 20711195 |
| Towards A Fully Automated High-Throughput Phototransfection System. | Cappelleri, David J; Halasz, Adam; Sul, Jai-Yoon; Kim, Tae Kyung; Eberwine, James; Kumar, Vijay | JALA (Charlottesville, Va.) | 2010 Aug 1 | 329-341 | 20706617 |
| Three-dimensional, flexible nanoscale field-effect transistors as localized bioprobes. | Tian, Bozhi; Cohen-Karni, Tzahi; Qing, Quan; Duan, Xiaojie; Xie, Ping; Lieber, Charles M | Science (New York, N.Y.) | 2010 Aug 13 | 830-4 | 20705858 |
| Frequency domain detection of biomolecules using silicon nanowire biosensors. | Zheng, Gengfeng; Gao, Xuan P A; Lieber, Charles M | Nano letters | 2010 Aug 11 | 3179-83 | 20698634 |
| Enhanced optical transmission mediated by localized plasmons in anisotropic, three-dimensional nanohole arrays. | Yang, Jiun-Chan; Gao, Hanwei; Suh, Jae Yong; Zhou, Wei; Lee, Min Hyung; Odom, Teri W | Nano letters | 2010 Aug 11 | 3173-8 | 20698633 |
| A custody battle for the mind: evidence for extensive imprinting in the brain. | Tollkuhn, Jessica; Xu, Xiaohong; Shah, Nirao M | Neuron | 2010 Aug 12 | 359-62 | 20696374 |
| Radially aligned, electrospun nanofibers as dural substitutes for wound closure and tissue regeneration applications. | Xie, Jingwei; Macewan, Matthew R; Ray, Wilson Z; Liu, Wenying; Siewe, Daku Y; Xia, Younan | ACS nano | 2010 Sep 28 | 5027-36 | 20695478 |
| Engineering single Cys2His2 zinc finger domains using a bacterial cell-based two-hybrid selection system. | Thibodeau-Beganny, Stacey; Maeder, Morgan L; Joung, J Keith | Methods in molecular biology (Clifton, N.J.) | 2010 | 31-50 | 20680826 |
| Reading chimpanzee faces: evidence for the role of verbal labels in categorical perception of emotion. | Fugate, Jennifer M B; Gouzoules, Harold; Barrett, Lisa Feldman | Emotion (Washington, D.C.) | 2010 Aug | 544-54 | 20677871 |
| Synthetic receptors with antibody-like binding affinities. | Kodadek, Thomas | Current opinion in chemical biology | 2010 Dec | 713-20 | 20674471 |
| Development of antibody surrogates for the treatment of cancers and autoimmune disease. | Kodadek, Thomas | Current opinion in chemical biology | 2010 Dec | 721-7 | 20674470 |
| A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response. | Huarte, Maite; Guttman, Mitchell; Feldser, David; Garber, Manuel; Koziol, Magdalena J; Kenzelmann-Broz, Daniela; Khalil, Ahmad M; Zuk, Or; Amit, Ido; Rabani, Michal; Attardi, Laura D; Regev, Aviv; Lander, Eric S; Jacks, Tyler; Rinn, John L | Cell | 2010 Aug 6 | 409-19 | 20673990 |
| Volume exclusion and soft interaction effects on protein stability under crowded conditions. | Miklos, Andrew C; Li, Conggang; Sharaf, Naima G; Pielak, Gary J | Biochemistry | 2010 Aug 24 | 6984-91 | 20672856 |
| Quantifying E. coli proteome and transcriptome with single-molecule sensitivity in single cells. | Taniguchi, Yuichi; Choi, Paul J; Li, Gene-Wei; Chen, Huiyi; Babu, Mohan; Hearn, Jeremy; Emili, Andrew; Xie, X Sunney | Science (New York, N.Y.) | 2010 Jul 30 | 533-8 | 20671182 |
| The virus as metabolic engineer. | Maynard, Nathaniel D; Gutschow, Miriam V; Birch, Elsa W; Covert, Markus W | Biotechnology journal | 2010 Jul | 686-94 | 20665642 |
| Steroid receptor coactivator-3 expression in lung cancer and its role in the regulation of cancer cell survival and proliferation. | Cai, Di; Shames, David S; Raso, Maria Gabriela; Xie, Yang; Kim, Young H; Pollack, Jonathan R; Girard, Luc; Sullivan, James P; Gao, Boning; Peyton, Michael; Nanjundan, Meera; Byers, Lauren; Heymach, John; Mills, Gordon; Gazdar, Adi F; Wistuba, Ignacio; Kod | Cancer research | 2010 Aug 15 | 6477-85 | 20663904 |
| Macromolecular crowding remodels the energy landscape of a protein by favoring a more compact unfolded state. | Hong, Jiang; Gierasch, Lila M | Journal of the American Chemical Society | 2010 Aug 4 | 10445-52 | 20662522 |
| Genome-wide analysis reveals mechanisms modulating autophagy in normal brain aging and in Alzheimer's disease. | Lipinski, Marta M; Zheng, Bin; Lu, Tao; Yan, Zhenyu; Py, Benedicte F; Ng, Aylwin; Xavier, Ramnik J; Li, Cheng; Yankner, Bruce A; Scherzer, Clemens R; Yuan, Junying | Proceedings of the National Academy of Sciences of the United States of America | 2010 Aug 10 | 14164-9 | 20660724 |
| Autonomous head-mounted electrophysiology systems for freely behaving primates. | Gilja, Vikash; Chestek, Cindy A; Nuyujukian, Paul; Foster, Justin; Shenoy, Krishna V | Current opinion in neurobiology | 2010 Oct | 676-86 | 20655733 |
| Electrospun nanofibers for neural tissue engineering. | Xie, Jingwei; MacEwan, Matthew R; Schwartz, Andrea G; Xia, Younan | Nanoscale | 2010 Jan | 35-44 | 20648362 |
| Epigenetic memory in induced pluripotent stem cells. | Kim, K; Doi, A; Wen, B; Ng, K; Zhao, R; Cahan, P; Kim, J; Aryee, M J; Ji, H; Ehrlich, L I R; Yabuuchi, A; Takeuchi, A; Cunniff, K C; Hongguang, H; McKinney-Freeman, S; Naveiras, O; Yoon, T J; Irizarry, R A; Jung, N; Seita, J; Hanna, J; Murakami, P; Jaenis | Nature | 2010 Sep 16 | 285-90 | 20644535 |
| Regulation of myeloid leukaemia by the cell-fate determinant Musashi. | Ito, Takahiro; Kwon, Hyog Young; Zimdahl, Bryan; Congdon, Kendra L; Blum, Jordan; Lento, William E; Zhao, Chen; Lagoo, Anand; Gerrard, Gareth; Foroni, Letizia; Goldman, John; Goh, Harriet; Kim, Soo-Hyun; Kim, Dong-Wook; Chuah, Charles; Oehler, Vivian G; R | Nature | 2010 Aug 5 | 765-8 | 20639863 |
| Determinants of divergent adaptation and Dobzhansky-Muller interaction in experimental yeast populations. | Anderson, James B; Funt, Jason; Thompson, Dawn Anne; Prabhu, Snehit; Socha, Amanda; Sirjusingh, Caroline; Dettman, Jeremy R; Parreiras, Lucas; Guttman, David S; Regev, Aviv; Kohn, Linda M | Current biology : CB | 2010 Aug 10 | 1383-8 | 20637622 |
| A forward-genetic screen and dynamic analysis of lambda phage host-dependencies reveals an extensive interaction network and a new anti-viral strategy. | Maynard, Nathaniel D; Birch, Elsa W; Sanghvi, Jayodita C; Chen, Lu; Gutschow, Miriam V; Covert, Markus W | PLoS genetics | 2010 Jul | e1001017 | 20628568 |
| The role of nucleosome positioning in the evolution of gene regulation. | Tsankov, Alexander M; Thompson, Dawn Anne; Socha, Amanda; Regev, Aviv; Rando, Oliver J | PLoS biology | 2010 | e1000414 | 20625544 |
| Automatic identification of fluorescently labeled brain cells for rapid functional imaging. | Valmianski, Ilya; Shih, Andy Y; Driscoll, Jonathan D; Matthews, David W; Freund, Yoav; Kleinfeld, David | Journal of neurophysiology. | 2010 Sep; | 1803-11 | 20610792 |
| Synthetic strategies for studying embryonic development. | Ouyang, Xiaohu; Chen, James K | Chemistry & biology | 2010 Jun 25 | 590-606 | 20609409 |
| Discrete time rescaling theorem: determining goodness of fit for discrete time statistical models of neural spiking. | Haslinger, Robert; Pipa, Gordon; Brown, Emery | Neural computation | 2010 Oct | 2477-506 | 20608868 |
| Social demographic change and autism. | Liu, Kayuet; Zerubavel, Noam; Bearman, Peter | Demography | 2010 May | 327-43 | 20608100 |
| Discovery of a proneurogenic, neuroprotective chemical. | Pieper, Andrew A; Xie, Shanhai; Capota, Emanuela; Estill, Sandi Jo; Zhong, Jeannie; Long, Jeffrey M; Becker, Ginger L; Huntington, Paula; Goldman, Shauna E; Shen, Ching-Han; Capota, Maria; Britt, Jeremiah K; Kotti, Tiina; Ure, Kerstin; Brat, Daniel J; Wil | Cell | 2010 Jul 9 | 39-51 | 20603013 |
| Digital PCR on a SlipChip. | Shen, Feng; Du, Wenbin; Kreutz, Jason E; Fok, Alice; Ismagilov, Rustem F | Lab on a chip | 2010 Oct 21 | 2666-72 | 20596567 |
| Genetic technologies. Synthetic "life," ethics, national security, and public discourse. | Cho, Mildred K; Relman, David A | Science (New York, N.Y.) | 2010 Jul 2 | 38-9 | 20595601 |
| Facile synthesis of Ag nanocubes of 30 to 70 nm in edge length with CF(3)COOAg as a precursor. | Zhang, Qiang; Li, Weiyang; Wen, Long-Ping; Chen, Jingyi; Xia, Younan | Chemistry (Weinheim an der Bergstrasse, Germany) | 2010 Sep 3 | 10234-9 | 20593441 |
| Older and wiser? An affective science perspective on age-related challenges in financial decision making. | Weierich, Mariann R; Kensinger, Elizabeth A; Munnell, Alicia H; Sass, Steven A; Dickerson, Brad C; Wright, Christopher I; Barrett, Lisa Feldman | Social cognitive and affective neuroscience | 2011 Apr | 195-206 | 20587596 |
| Uniform beads with controllable pore sizes for biomedical applications. | Choi, Sung-Wook; Yeh, Yi-Chun; Zhang, Yu; Sung, Hsing-Wen; Xia, Younan | Small (Weinheim an der Bergstrasse, Germany) | 2010 Jul 19 | 1492-8 | 20578116 |
| Dead-end filling of SlipChip evaluated theoretically and experimentally as a function of the surface chemistry and the gap size between the plates for lubricated and dry SlipChips. | Li, Liang; Karymov, Mikhail A; Nichols, Kevin P; Ismagilov, Rustem F | Langmuir : the ACS journal of surfaces and colloids | 2010 Jul 20 | 12465-71 | 20575548 |
| Engineering the genomes of wild insect populations: challenges, and opportunities provided by synthetic Medea selfish genetic elements. | Hay, Bruce A; Chen, Chun-Hong; Ward, Catherine M; Huang, Haixia; Su, Jessica T; Guo, Ming | Journal of insect physiology | 2010 Oct | 1402-13 | 20570677 |
| Regulation of cell motile behavior by crosstalk between cadherin- and integrin-mediated adhesions. | Borghi, Nicolas; Lowndes, Molly; Maruthamuthu, Venkat; Gardel, Margaret L; Nelson, W James | Proceedings of the National Academy of Sciences of the United States of America | 2010 Jul 27 | 13324-9 | 20566866 |
| Effects of proteins on protein diffusion. | Wang, Yaqiang; Li, Conggang; Pielak, Gary J | Journal of the American Chemical Society | 2010 Jul 14 | 9392-7 | 20560582 |
| Affect as a Psychological Primitive. | Barrett, Lisa Feldman; Bliss-Moreau, Eliza | Advances in experimental social psychology. | 2009; | 167-218 | 20552040 |
| Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity. | Willner, Dana; Furlan, Mike; Schmieder, Robert; Grasis, Juris A; Pride, David T; Relman, David A; Angly, Florent E; McDole, Tracey; Mariella Jr, Ray P; Rohwer, Forest; Haynes, Matthew | Proceedings of the National Academy of Sciences of the United States of America | 2011 Mar 15 | 4547-53 | 20547834 |
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