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Database/Libraries

The Building Blocks, Biological Pathways and Networks program has transitioned from Common Fund support.  For more information, please visit https://commonfund.nih.gov/bbpn/index. Please note that since the Building Blocks, Biological Pathways and Networks program is no longer supported by the Common Fund, the program website is being maintained as an archive and will not be updated on a regular basis. 

 

Synthetic Lethality Analyzed by Microarray (SLAM) - Inquire via Jef(link sends email) Boeke(link sends email) or Pamela Meluh(link sends email)

DBAli(link is external)-Database of sequence and structure alignments generated by different alignment methods

Integral Membrane Database (no longer maintained)-Integral membrane database for 34 genomes

LigBase(link is external)-Database of structurally defined ligand binding sites in PDB

Membrane Protein counts (no longer maintained)-Counts of membrane protein families represented in 34 genomes

ModBase(link is external)-Comprehensive database of annotated comparative protein structure models

PiBase(link is external)-Comprehensive database of structurally defined interfaces in proteins

ALBASE-3-Database of multiple protein structure alignments used to derive MODELLER restraints

Structural decoys(link is external)-Series of structural decoys used in the Sali Lab. Includes the MOULDER, MODPIPE and MODEM sets.

Madison Metabolomics Consortium Database (no longer maintained)

Biological Magnetic Resonance Data Bank(link is external)

Human Metabolome Database V2.5(link is external)

International Chemical Identifiers(link is external)

This page last reviewed on December 21, 2024