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Funded Research 

The Funded Research presented on this page represents the components of NIH Big Data Knowledge that receive NIH Common Fund support. For a full listing of Big Data to Knowledge funded research and additional information please visit: http://bd2k.nih.gov/.

Development of Software and Analysis Methods for Biomedical Big Data in Targeted Areas of High Need (U01) RFA-HG-14-020
PI Name Institution Name Title
BILGIN, ALI UNIVERSITY OF ARIZONA Task-Specific Compression for Biomedical Big Data
DONG, HONG-WEI UNIVERSITY OF SOUTHERN CALIFORNIA From Terabytes of Pixels to Intuitive Brain Networks
HUANG, ERICH S. DUKE UNIVERSITY Flexible & Executable Provenance in Data-Intensive Biomedical Research: A Flexible Research Data Service
IVES, ZACHARY(contact)
KIM, JUNHYONG
UNIVERSITY OF PENNSYLVANIA Approximating and Reasoning about Data Provenance
KOYUTURK, MEHMET CASE WESTERN RESERVE UNIVERSITY Theoretical Foundations and Software Infrastructure for Biological Network Databases
MILENKOVIC, OLGICA (contact)
WEISSMAN, TSACHY
UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN Genomic Compression: From Information Theory to Parallel Algorithms
MINOR, WLADEK UNIVERSITY OF VIRGINIA Integrated resource for reproducibility in macromolecular crystallography
NOVEMBRE, JOHN THE UNIVERSITY OF CHICAGO Tools for Visualization of Geographic Structure in Population Genomic Data
PARK, PETER J PRESIDENT & FELLOWS OF HARVARD COLLEGE Visual Analysis of Genomic and Clinical Data from Large Patient Cohorts
PICONE, JOSEPH (contact)
HARABAGIU, SANDA MARIA
OBEID, IYAD
TEMPLE UNIV OF THE COMMONWEALTH Automatic discovery and processing of EEG cohorts from clinical records
ROSE, PETER W UNIVERSITY OF CALIFORNIA SAN DIEGO Compressive Structural BioInformatics: High Efficiency 3D Structure Compression
SAHOO, SATYA SANKET CASE WESTERN RESERVE UNIVERSITY A PROV standard-based data source agnostic provenance engine for Big Data analytics
WEBER, GRIFFIN M PRESIDENT & FELLOWS OF HARVARD COLLEGE Visualizing healthcare system dynamics in biomedical Big Data
WU, CHUNLEI THE SCRIPPS RESEARCH INSTITUTE Community Platform for Data Wrangling of Gene and Genetic Variant Annotations
ZHU, JUN ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI Developing methods for curating multi-omics data
 
 
Revisions to Add Biomedical Big Data Training to Active NLM Institutional Training Grants in Biomedical Informatics (T15) RFA-HG-14-006
PI Name Institution Name Title

HRIPCSAK, GEORGE M.

COLUMBIA UNIVERSITY Training in Biomedical Informatics at Columbia University
 
 
Predoctoral Training in Biomedical Big Data Science (T32) RFA-HG-14-004
PI Name Institution Name Title

KOSOROK, MICHAEL R (contact)
FOREST, MARK GREGORY

UNIV OF NORTH CAROLINA CHAPEL HILL Big Data to Knowledge Training Program
PELLEGRINI, MATTEO UNIVERSITY OF CALIFORNIA LOS ANGELES Biomedical Big Data Training Grant
 
 
Open Educational Resources for Biomedical Big Data (R25) RFA-HG-14-009
PI Name Institution Name Title
AMARO, ROMMIE E (contact)
ALTINTAS DE CALLAFON, ILKAY
UNIVERSITY OF CALIFORNIA SAN DIEGO AN OPEN RESOURCE FOR COLLABORATIVE BIOMEDICAL BIG DATA TRAINING
CAFFO, BRIAN SCOTT JOHNS HOPKINS UNIVERSITY Big Data education for the masses: MOOCs, modules, & intelligent tutoring systems
HERSH, WILLIAM R (contact)
HAENDEL, MELISSA A
MCWEENEY, SHANNON K.
OREGON HEALTH & SCIENCE UNIVERSITY Adding Big Data Open Educational Resources to the ONC Health IT Curriculum
IRIZARRY, RAFAEL ANGEL HARVARD SCHOOL OF PUBLIC HEALTH Biomedical Data Science Online Curriculum on HarvardX 
LEE, CHRISTOPHER   UNIVERSITY OF CALIFORNIA LOS ANGELES The BD2K Concept Network: open sharing of active-learning and tools online
PEVZNER, PAVEL A  UNIVERSITY OF CALIFORNIA SAN DIEGO Integrated Active Learning Framework for Biomedical BD2K
 
 
Courses for Skills Development in Biomedical Big Data Science (R25) RFA-HG-14-008
PI Name Institution Name Title
DORR, DAVID A. (contact)
HAENDEL, MELISSA A
MCWEENEY, SHANNON K. 
OREGON HEALTH & SCIENCE UNIVERSITY OHSU Informatics Analytics BD2K Skill Course
PATHAK, JYOTISHMAN (contact)
CHUTE, CHRISTOPHER G
NEUHAUSER, CLAUDIA M.
MAYO CLINIC ROCHESTER Big Data Coursework for Computational Medicine 
SHOJAIE, ALI (contact)
WITTEN, DANIELA
UNIVERSITY OF WASHINGTON Summer Institute for Statistics of Big Data
 
 
 
 
BD2K-LINCS-Perturbation Data Coordination and Integration Center (DCIC) (U54) RFA-HG-14-001
PI Name Institution Name Title
MA'AYAN, AVI (contact)
MEDVEDOVIC, MARIO
SCHURER, STEPHAN C
ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI Data Coordination and Integration Center for LINCS-BD2K
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