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NIH Director's New Innovator Award Program (2083)
Publication TitleAuthorsJournalPublication DatePage NoPubMedID
Vasoactive effects of stable aqueous suspensions of single walled carbon nanotubes in hamsters and mice.Frame, Mary D; Dewar, Anthony M; Mullick Chowdhury, Sayan; Sitharaman, BalajiNanotoxicology2014 Dec867-7523992463
Global sensitivity analysis of a mathematical model of acute inflammation identifies nonlinear dependence of cumulative tissue damage on host interleukin-6 responses.Mathew, Shibin; Bartels, John; Banerjee, Ipsita; Vodovotz, YoramJournal of theoretical biology2014 Oct 7132-4824909493
Diversity of immunoglobulin lambda light chain gene usage over developmental stages in the horse.Tallmadge, Rebecca L; Tseng, Chia T; Felippe, M Julia BDevelopmental and comparative immunology2014 Oct171-924726757
Mobile elements and viral integrations prompt considerations for bacterial DNA integration as a novel carcinogen.Robinson, Kelly M; Dunning Hotopp, Julie CCancer letters2014 Oct 1137-4424956175
Predicting clinical outcome using brain activation associated with set-shifting and central coherence skills in Anorexia Nervosa.Garrett, Amy S; Lock, James; Datta, Nandini; Beenhaker, Judy; Kesler, Shelli R; Reiss, Allan LJournal of psychiatric research2014 Oct26-3325027478
A composite hydrogel platform for the dissection of tumor cell migration at tissue interfaces.Rape, Andrew D; Kumar, SanjayBiomaterials2014 Oct8846-5325047626
Vaccine focusing to cross-subtype HIV-1 gp120 variable loop epitopes.Cardozo, Timothy; Wang, Shixia; Jiang, Xunqing; Kong, Xiang-Peng; Hioe, Catarina; Krachmarov, ChavdarVaccine2014 Sep 34916-2425045827
Default mode network as a potential biomarker of chemotherapy-related brain injury.Kesler, Shelli RNeurobiology of aging2014 SepS11-924913897
An empirical analysis of White privilege, social position and health.Kwate, Naa Oyo A; Goodman, Melody SSocial science & medicine (1982)2014 Sep150-6025014267
Comprehensive analysis of loops at protein-protein interfaces for macrocycle design.Gavenonis, Jason; Sheneman, Bradley A; Siegert, Timothy R; Eshelman, Matthew R; Kritzer, Joshua ANature chemical biology2014 Sep716-2225038791
A comprehensive thalamocortical projection map at the mesoscopic level.Hunnicutt, Barbara J; Long, Brian R; Kusefoglu, Deniz; Gertz, Katrina J; Zhong, Haining; Mao, TianyiNature neuroscience2014 Sep1276-8525086607
Addressing population health and health inequalities: the role of fundamental causes.Cerda, Magdalena; Tracy, Melissa; Ahern, Jennifer; Galea, SandroAmerican journal of public health2014 SepS609-1925100428
Update on Janus Kinase Antagonists in Inflammatory Bowel Disease.Boland, Brigid S; Sandborn, William J; Chang, John TGastroenterology clinics of North America2014 Sep603-61725110261
Conditional tolerance of temperate phages via transcription-dependent CRISPR-Cas targeting.Goldberg, Gregory W; Jiang, Wenyan; Bikard, David; Marraffini, Luciano ANature2014 Aug 31NULL25174707
Human induced pluripotent stem cell-derived cardiomyocytes as an in vitro model for coxsackievirus b3-induced myocarditis and antiviral drug screening platform.Sharma, Arun; Marceau, Caleb; Hamaguchi, Ryoko; Burridge, Paul W; Rajarajan, Kuppusamy; Churko, Jared M; Wu, Haodi; Sallam, Karim I; Matsa, Elena; Sturzu, Anthony C; Che, Yonglu; Ebert, Antje; Diecke, Sebastian; Liang, Ping; Red-Horse, Kristy; Carette, JaCirculation research2014 Aug 29556-6625015077
Reinforcement generates reproductive isolation between neighbouring conspecific populations of spadefoot toads.Pfennig, Karin S; Rice, Amber MProceedings. Biological sciences / The Royal Society2014 Aug 222014094924990680
Exploring inflammatory disease drug effects on neutrophil function.Wu, Xiaojie; Kim, Donghyuk; Young, Ashlyn T; Haynes, Christy LThe Analyst2014 Aug 214056-6324946254
Dnmt3a regulates global gene expression in olfactory sensory neurons and enables odorant-induced transcription.Colquitt, Bradley M; Markenscoff-Papadimitriou, Eirene; Duffie, Rachel; Lomvardas, StavrosNeuron2014 Aug 20823-3825123312
Interventional Magnetic Resonance Imaging-Guided Cell Transplantation into the Brain with Radially Branched Deployment.Silvestrini, Matthew T; Yin, Dali; Martin, Alastair J; Coppes, Valerie G; Mann, Preeti; Larson, Paul S; Starr, Philip A; Zeng, Xianmin; Gupta, Nalin; Panter, S Scott; Desai, Tejal A; Lim, Daniel AMolecular therapy : the journal of the American Society of Gene Therapy2014 Aug 20NULL25138755
Response and Adaptation of Escherichia coli to Suppression of the Amber Stop Codon.Wang, Qian; Sun, Tingting; Xu, Jianfeng; Shen, Zhouxin; Briggs, Steven P; Zhou, Demin; Wang, LeiChembiochem : a European journal of chemical biology2014 Aug 181744-925044429
Single-Cell Phenotyping within Transparent Intact Tissue through Whole-Body Clearing.Yang, Bin; Treweek, Jennifer B; Kulkarni, Rajan P; Deverman, Benjamin E; Chen, Chun-Kan; Lubeck, Eric; Shah, Sheel; Cai, Long; Gradinaru, VivianaCell2014 Aug 14945-5825088144
Supergenomic Network Compression and the Discovery of EXP1 as a Glutathione Transferase Inhibited by Artesunate.Lisewski, Andreas Martin; Quiros, Joel P; Ng, Caroline L; Adikesavan, Anbu Karani; Miura, Kazutoyo; Putluri, Nagireddy; Eastman, Richard T; Scanfeld, Daniel; Regenbogen, Sam J; Altenhofen, Lindsey; Llinas, Manuel; Sreekumar, Arun; Long, Carole; Fidock, DaCell2014 Aug 14916-2825126794
A Type VI Secretion-Related Pathway in Bacteroidetes Mediates Interbacterial Antagonism.Russell, Alistair B; Wexler, Aaron G; Harding, Brittany N; Whitney, John C; Bohn, Alan J; Goo, Young Ah; Tran, Bao Q; Barry, Natasha A; Zheng, Hongjin; Peterson, S Brook; Chou, Seemay; Gonen, Tamir; Goodlett, David R; Goodman, Andrew L; Mougous, Joseph DCell host & microbe2014 Aug 13227-3625070807
Hira-mediated h3.3 incorporation is required for DNA replication and ribosomal RNA transcription in the mouse zygote.Lin, Chih-Jen; Koh, Fong Ming; Wong, Priscilla; Conti, Marco; Ramalho-Santos, MiguelDevelopmental cell2014 Aug 11268-7925087892
Exploiting oxidative microenvironments in the body as triggers for drug delivery systems.Joshi-Barr, Shivanjali; de Gracia Lux, Caroline; Mahmoud, Enas; Almutairi, AdahAntioxidants & redox signaling2014 Aug 10730-5424328819
Interplay of matrix stiffness and protein tethering in stem cell differentiation.Wen, Jessica H; Vincent, Ludovic G; Fuhrmann, Alexander; Choi, Yu Suk; Hribar, Kolin C; Taylor-Weiner, Hermes; Chen, Shaochen; Engler, Adam JNature materials2014 Aug 10NULL25108614
Investigation of acoustic streaming patterns around oscillating sharp edges.Nama, Nitesh; Huang, Po-Hsun; Huang, Tony Jun; Costanzo, FrancescoLab on a chip2014 Aug 72824-3624903475
Replaying evolutionary transitions from the dental fossil record.Harjunmaa, Enni; Seidel, Kerstin; Hakkinen, Teemu; Renvoise, Elodie; Corfe, Ian J; Kallonen, Aki; Zhang, Zhao-Qun; Evans, Alistair R; Mikkola, Marja L; Salazar-Ciudad, Isaac; Klein, Ophir D; Jernvall, JukkaNature2014 Aug 744-825079326
Spatiotemporal dynamics underlying object completion in human ventral visual cortex.Tang, Hanlin; Buia, Calin; Madhavan, Radhika; Crone, Nathan E; Madsen, Joseph R; Anderson, William S; Kreiman, GabrielNeuron2014 Aug 6736-4825043420
Pbp2x localizes separately from Pbp2b and other peptidoglycan synthesis proteins during later stages of cell division of Streptococcus pneumoniaeýýýD39.Tsui, Ho-Ching T; Boersma, Michael J; Vella, Stephen A; Kocaoglu, Ozden; Kuru, Erkin; Peceny, Julia K; Carlson, Erin E; VanNieuwenhze, Michael S; Brun, Yves V; Shaw, Sidney L; Winkler, Malcolm EMolecular microbiology2014 Aug 6NULL25099088
Noncoding RNA transcription targets AID to divergently transcribed loci in B cells.Pefanis, Evangelos; Wang, Jiguang; Rothschild, Gerson; Lim, Junghyun; Chao, Jaime; Rabadan, Raul; Economides, Aris N; Basu, UttiyaNature2014 Aug 6NULL25119026
Akt-dependent metabolic reprogramming regulates tumor cell histone acetylation.Lee, Joyce V; Carrer, Alessandro; Shah, Supriya; Snyder, Nathaniel W; Wei, Shuanzeng; Venneti, Sriram; Worth, Andrew J; Yuan, Zuo-Fei; Lim, Hee-Woong; Liu, Shichong; Jackson, Ellen; Aiello, Nicole M; Haas, Naomi B; Rebbeck, Timothy R; Judkins, Alexander; Cell metabolism2014 Aug 5306-1924998913
From genomes to societies: a holistic view of determinants of human health.Shi, Yuyan; Zhong, ShengCurrent opinion in biotechnology2014 Aug134-14224686286
Impairments in experience-dependent scaling and stability of hippocampal place fields limit spatial learning in a mouse model of Alzheimer's disease.Zhao, Rong; Fowler, Stephanie W; Chiang, Angie C A; Ji, Daoyun; Jankowsky, Joanna LHippocampus2014 Aug963-7824752989
Novel domains of expression for orphan receptor tyrosine kinase Ror2 in the human and mouse reproductive system.Arora, Ripla; Altman, Eran; Tran, Nam D; Laird, Diana JDevelopmental dynamics : an official publication of the American Association of Anatomists2014 Aug1037-4524753105
Computer-aided discovery of Trypanosoma brucei RNA-editing terminal uridylyl transferase 2 inhibitors.Demir, Ozlem; Labaied, Mehdi; Merritt, Chris; Stuart, Ken; Amaro, Rommie EChemical biology & drug design2014 Aug131-924903413
CD19-antigen specific nanoscale liposomal formulation of a SYK P-site inhibitor causes apoptotic destruction of human B-precursor leukemia cells.Myers, Dorothea E; Yiv, Seang; Qazi, Sanjive; Ma, Hong; Cely, Ingrid; Shahidzadeh, Anoush; Arellano, Martha; Finestone, Erin; Gaynon, Paul S; Termuhlen, Amanda; Cheng, Jianjun; Uckun, Fatih MIntegrative biology : quantitative biosciences from nano to macro2014 Aug766-8024910947
Activating human genes with zinc finger proteins, transcription activator-like effectors and CRISPR/Cas9 for gene therapy and regenerative medicine.Gersbach, Charles A; Perez-Pinera, PabloExpert opinion on therapeutic targets2014 Aug835-924917359
All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins.Hochbaum, Daniel R; Zhao, Yongxin; Farhi, Samouil L; Klapoetke, Nathan; Werley, Christopher A; Kapoor, Vikrant; Zou, Peng; Kralj, Joel M; Maclaurin, Dougal; Smedemark-Margulies, Niklas; Saulnier, Jessica L; Boulting, Gabriella L; Straub, Christoph; Cho, YNature methods2014 Aug825-3324952910
Predictors of abdominal pain in depressed pediatric inflammatory bowel disease patients.Srinath, Arvind I; Goyal, Alka; Zimmerman, Lori A; Newara, Melissa C; Kirshner, Margaret A; McCarthy, Francis Nicole; Keljo, David; Binion, David; Bousvaros, Athos; DeMaso, David R; Youk, Ada; Szigethy, Eva MInflammatory bowel diseases2014 Aug1329-4024983975
Induction of ectopic taste buds by SHH reveals the competency and plasticity of adult lingual epithelium.Castillo, David; Seidel, Kerstin; Salcedo, Ernesto; Ahn, Christina; de Sauvage, Frederic J; Klein, Ophir D; Barlow, Linda ADevelopment (Cambridge, England)2014 Aug2993-300224993944
Noninvasive optical inhibition with a red-shifted microbial rhodopsin.Chuong, Amy S; Miri, Mitra L; Busskamp, Volker; Matthews, Gillian A C; Acker, Leah C; Sorensen, Andreas T; Young, Andrew; Klapoetke, Nathan C; Henninger, Mike A; Kodandaramaiah, Suhasa B; Ogawa, Masaaki; Ramanlal, Shreshtha B; Bandler, Rachel C; Allen, BrNature neuroscience2014 Aug1123-924997763
Optical trapping of individual human immunodeficiency viruses in culture fluid reveals heterogeneity with single-molecule resolution.Pang, Yuanjie; Song, Hanna; Kim, Jin H; Hou, Ximiao; Cheng, WeiNature nanotechnology2014 Aug624-3025038779
Redox processes inform multivariate transdifferentiation trajectories associated with TGF*-induced epithelial-mesenchymal transition.Prasanphanich, Adam F; Andrew Arencibia, C; Kemp, Melissa LFree radical biology & medicine2014 Aug 1NULL25088330
Lethal synergy involving bicyclomycin: an approach for reviving old antibiotics.Malik, Muhammad; Li, Liping; Zhao, Xilin; Kerns, Robert J; Berger, James M; Drlica, KarlThe Journal of antimicrobial chemotherapy2014 Jul 31NULL25085655
Mobile phones democratize and cultivate next-generation imaging, diagnostics and measurement tools.Ozcan, AydoganLab on a chip2014 Jul 293187-9424647550
Biomedical imaging and sensing using flatbed scanners.Gorocs, Zoltan; Ozcan, AydoganLab on a chip2014 Jul 293248-5724965011
Reactive oxygen species and the bacterial response to lethal stress.Zhao, Xilin; Drlica, KarlCurrent opinion in microbiology2014 Jul 286-Jan25078317
Dynamics and evolution of *-catenin-dependent Wnt signaling revealed through massively parallel clonogenic screening.Shah, Pavak K; Walker, Matthew P; Sims, Christopher E; Major, Michael B; Allbritton, Nancy LIntegrative biology : quantitative biosciences from nano to macro2014 Jul 24673-8424871928
Tunable vapor-condensed nanolenses.McLeod, Euan; Nguyen, Chau; Huang, Patrick; Luo, Wei; Veli, Muhammed; Ozcan, AydoganACS nano2014 Jul 227340-924979060
Simultaneous and independent tuning of RhoA and Rac1 activity with orthogonally inducible promoters.MacKay, Joanna L; Kumar, SanjayIntegrative biology : quantitative biosciences from nano to macro2014 Jul 21NULL25044255
ABCB5 is a limbal stem cell gene required for corneal development and repair.Ksander, Bruce R; Kolovou, Paraskevi E; Wilson, Brian J; Saab, Karim R; Guo, Qin; Ma, Jie; McGuire, Sean P; Gregory, Meredith S; Vincent, William J B; Perez, Victor L; Cruz-Guilloty, Fernando; Kao, Winston W Y; Call, Mindy K; Tucker, Budd A; Zhan, Qian; MNature2014 Jul 17353-725030174
Insights into secondary metabolism from a global analysis of prokaryotic biosynthetic gene clusters.Cimermancic, Peter; Medema, Marnix H; Claesen, Jan; Kurita, Kenji; Wieland Brown, Laura C; Mavrommatis, Konstantinos; Pati, Amrita; Godfrey, Paul A; Koehrsen, Michael; Clardy, Jon; Birren, Bruce W; Takano, Eriko; Sali, Andrej; Linington, Roger G; FischbacCell2014 Jul 17412-2125036635
Systematic Identification of Barriers to Human iPSC Generation.Qin, Han; Diaz, Aaron; Blouin, Laure; Lebbink, Robert Jan; Patena, Weronika; Tanbun, Priscilia; LeProust, Emily M; McManus, Michael T; Song, Jun S; Ramalho-Santos, MiguelCell2014 Jul 17449-6125036638
Rbm20-deficient cardiogenesis reveals early disruption of RNA processing and sarcomere remodeling establishing a developmental etiology for dilated cardiomyopathy.Beraldi, Rosanna; Li, Xing; Martinez Fernandez, Almudena; Reyes, Santiago; Secreto, Frank; Terzic, Andre; Olson, Timothy M; Nelson, Timothy JHuman molecular genetics2014 Jul 153779-9124584570
TRF2, but not TBP, mediates the transcription of ribosomal protein genes.Wang, Yuan-Liang; Duttke, Sascha H C; Chen, Kai; Johnston, Jeff; Kassavetis, George A; Zeitlinger, Julia; Kadonaga, James TGenes & development2014 Jul 151550-524958592
Longitudinal, 3D in vivo Imaging of Sebaceous Glands by Coherent Anti-Stokes Raman Scattering Microscopy - Normal Function and Response to Cryotherapy.Jung, Yookyung; Tam, Joshua; Jalian, H Ray; Anderson, R Rox; Evans, Conor LThe Journal of investigative dermatology2014 Jul 15NULL25026458
Complex reconfiguration of DNA nanostructures.Wei, Bryan; Ong, Luvena L; Chen, Jeffrey; Jaffe, Alexander S; Yin, PengAngewandte Chemie (International ed. in English)2014 Jul 147475-924899518
Self-folding single cell grippers.Malachowski, Kate; Jamal, Mustapha; Jin, Qianru; Polat, Beril; Morris, Christopher J; Gracias, David HNano letters2014 Jul 94164-7024937214
Improved annotation of antibiotic resistance determinants reveals microbial resistomes cluster by ecology.Gibson, Molly K; Forsberg, Kevin J; Dantas, GautamThe ISME journal2014 Jul 8NULL25003965
Engineering synthetic TALE and CRISPR/Cas9 transcription factors for regulating gene expression.Kabadi, Ami M; Gersbach, Charles AMethods (San Diego, Calif.)2014 Jul 8NULL25010559
Discovery of the lomaiviticin biosynthetic gene cluster in Salinispora pacifica.Janso, Jeffrey E; Haltli, Brad A; Eustaquio, Alessandra S; Kulowski, Kerry; Waldman, Abraham J; Zha, Li; Nakamura, Hitomi; Bernan, Valerie S; He, Haiyin; Carter, Guy T; Koehn, Frank E; Balskus, Emily PTetrahedron2014 Jul 84156-416425045187
3-D intestinal scaffolds for evaluating the therapeutic potential of probiotics.Costello, Cait M; Sorna, Rachel M; Goh, Yih-Lin; Cengic, Ivana; Jain, Nina K; March, John CMolecular pharmaceutics2014 Jul 72030-924798584
Anti-diabetic activity of insulin-degrading enzyme inhibitors mediated by multiple hormones.Maianti, Juan Pablo; McFedries, Amanda; Foda, Zachariah H; Kleiner, Ralph E; Du, Xiu Quan; Leissring, Malcolm A; Tang, Wei-Jen; Charron, Maureen J; Seeliger, Markus A; Saghatelian, Alan; Liu, David RNature2014 Jul 394-824847884
Comparative metabolomics and structural characterizations illuminate colibactin pathway-dependent small molecules.Vizcaino, Maria I; Engel, Philipp; Trautman, Eric; Crawford, Jason MJournal of the American Chemical Society2014 Jul 29244-724932672
Targeting unique metabolic properties of breast tumor initiating cells.Feng, Weiguo; Gentles, Andrew; Nair, Ramesh V; Huang, Min; Lin, Yuan; Lee, Cleo Y; Cai, Shang; Scheeren, Ferenc A; Kuo, Angera H; Diehn, MaximilianStem cells (Dayton, Ohio)2014 Jul1734-4524497069
Modification of biomaterials with a self-protein inhibits the macrophage response.Kim, Yoon Kyung; Que, Richard; Wang, Szu-Wen; Liu, Wendy FAdvanced healthcare materials2014 Jul989-9424573988
Tissue-engineered cartilage with inducible and tunable immunomodulatory properties.Glass, Katherine A; Link, Jarrett M; Brunger, Jonathan M; Moutos, Franklin T; Gersbach, Charles A; Guilak, FarshidBiomaterials2014 Jul5921-3124767790
A melanoma cell state distinction influences sensitivity to MAPK pathway inhibitors.Konieczkowski, David J; Johannessen, Cory M; Abudayyeh, Omar; Kim, Jong Wook; Cooper, Zachary A; Piris, Adriano; Frederick, Dennie T; Barzily-Rokni, Michal; Straussman, Ravid; Haq, Rizwan; Fisher, David E; Mesirov, Jill P; Hahn, William C; Flaherty, KeithCancer discovery2014 Jul816-2724771846
Transcriptional atlas of cardiogenesis maps congenital heart disease interactome.Li, Xing; Martinez-Fernandez, Almudena; Hartjes, Katherine A; Kocher, Jean-Pierre A; Olson, Timothy M; Terzic, Andre; Nelson, Timothy JPhysiological genomics2014 Jul 1482-9524803680
CEP290 gene transfer rescues Leber congenital amaurosis cellular phenotype.Burnight, E R; Wiley, L A; Drack, A V; Braun, T A; Anfinson, K R; Kaalberg, E E; Halder, J A; Affatigato, L M; Mullins, R F; Stone, E M; Tucker, B AGene therapy2014 Jul662-7224807808
A neutral pH thermal hydrolysis method for quantification of structured RNAs.Wilson, Stephen C; Cohen, Daniel T; Wang, Xin C; Hammond, Ming CRNA (New York, N.Y.)2014 Jul1153-6024860014
Single-cell western blotting.Hughes, Alex J; Spelke, Dawn P; Xu, Zhuchen; Kang, Chi-Chih; Schaffer, David V; Herr, Amy ENature methods2014 Jul749-5524880876
Whole-genome sequencing to detect recent transmission of Mycobacterium tuberculosis in settings with a high burden of tuberculosis.Luo, Tao; Yang, Chongguang; Peng, Ying; Lu, Liping; Sun, Guomei; Wu, Jie; Jin, Xiaoping; Hong, Jianjun; Li, Fabin; Mei, Jian; DeRiemer, Kathryn; Gao, QianTuberculosis (Edinburgh, Scotland)2014 Jul434-4024888866
Evaluation of candidate spermatogonial markers ID4 and GPR125 in testes of adult human cadaveric organ donors.Sachs, C; Robinson, B D; Andres Martin, L; Webster, T; Gilbert, M; Lo, H-Y; Rafii, S; Ng, C K; Seandel, MAndrology2014 Jul607-1424902969
Ribosome profiling reveals sequence-independent post-initiation pausing as a signature of translation.Han, Yan; Gao, Xiangwei; Liu, Botao; Wan, Ji; Zhang, Xingqian; Qian, Shu-BingCell research2014 Jul842-5124903108
Tumour cell invasion: an emerging role for basal epithelial cell extrusion.Slattum, Gloria M; Rosenblatt, JodyNature reviews. Cancer2014 Jul495-50124943812
Fit for consumption: zebrafish as a model for tuberculosis.Cronan, Mark R; Tobin, David MDisease models & mechanisms2014 Jul777-8424973748
Emergent biosynthetic capacity in simple microbial communities.Chiu, Hsuan-Chao; Levy, Roie; Borenstein, ElhananPLoS computational biology2014 Jule100369524992662
zic-1 Expression in Planarian neoblasts after injury controls anterior pole regeneration.Vasquez-Doorman, Constanza; Petersen, Christian PPLoS genetics2014 Jule100445224992682
LipidWrapper: an algorithm for generating large-scale membrane models of arbitrary geometry.Durrant, Jacob D; Amaro, Rommie EPLoS computational biology2014 Jule100372025032790
Localization events-based sample drift correction for localization microscopy with redundant cross-correlation algorithm.Wang, Yina; Schnitzbauer, Joerg; Hu, Zhe; Li, Xueming; Cheng, Yifan; Huang, Zhen-Li; Huang, BoOptics express2014 Jun 3015982-9124977854
CD44-mediated Adhesion to Hyaluronic Acid Contributes to Mechanosensing and Invasive Motility.Kim, Yushan; Kumar, SanjayMolecular cancer research : MCR2014 Jun 24NULL24962319
Small-molecule axon-polarization studies enabled by a shear-free microfluidic gradient generator.Xu, Hui; Ferreira, Meghaan M; Heilshorn, Sarah CLab on a chip2014 Jun 212047-5624781157
Imaging the lymphatic system.Munn, Lance L; Padera, Timothy PMicrovascular research2014 Jun 21NULL24956510
Gyramides prevent bacterial growth by inhibiting DNA gyrase and altering chromosome topology.Rajendram, Manohary; Hurley, Katherine A; Foss, Marie H; Thornton, Kelsey M; Moore, Jared T; Shaw, Jared T; Weibel, Douglas BACS chemical biology2014 Jun 201312-924712739
Screening for noise in gene expression identifies drug synergies.Dar, Roy D; Hosmane, Nina N; Arkin, Michelle R; Siliciano, Robert F; Weinberger, Leor SScience (New York, N.Y.)2014 Jun 201392-624903562
Combined Magnetic Nanoparticle-based MicroRNA and Hyperthermia Therapy to Enhance Apoptosis in Brain Cancer Cells.Yin, Perry T; Shah, Birju P; Lee, Ki-BumSmall (Weinheim an der Bergstrasse, Germany)2014 Jun 20NULL24947843
Putative hydrogen bond to tyrosine M208 in photosynthetic reaction centers from Rhodobacter capsulatus significantly slows primary charge separation.Saggu, Miguel; Carter, Brett; Zhou, Xiaoxue; Faries, Kaitlyn; Cegelski, Lynette; Holten, Dewey; Boxer, Steven G; Kirmaier, ChristineThe journal of physical chemistry. B2014 Jun 196721-3224902471
Nucleophilic 1,4-Additions for Natural Product Discovery.Cox, Courtney L; Tietz, Jonathan I; Sokolowski, Karol; Melby, Joel O; Doroghazi, James R; Mitchell, Douglas AACS chemical biology2014 Jun 17NULL24937678
Method for auto-alignment of digital optical phase conjugation systems based on digital propagation.Jang, Mooseok; Ruan, Haowen; Zhou, Haojiang; Judkewitz, Benjamin; Yang, ChanghueiOptics express2014 Jun 1614054-7124977504
Novel tools, classic techniques: evolutionary studies using primate pluripotent stem cells.Hrvoj-Mihic, Branka; Marchetto, Maria C N; Gage, Fred H; Semendeferi, Katerina; Muotri, Alysson RBiological psychiatry2014 Jun 15929-3524041506
Synthesis, Characterization, In Vitro Phantom Imaging, and Cytotoxicity of A Novel Graphene-Based Multimodal Magnetic Resonance Imaging - X-Ray Computed Tomography Contrast Agent.Lalwani, Gaurav; Sundararaj, Joe Livingston; Schaefer, Kenneth; Button, Terry; Sitharaman, BalajiJournal of materials chemistry. B, Materials for biology and medicine2014 Jun 143519-353024999431
TLX: A master regulator for neural stem cell maintenance and neurogenesis.Islam, Mohammed M; Zhang, Chun-LiBiochimica et biophysica acta2014 Jun 13NULL24930777
SMYD3 links lysine methylation of MAP3K2 to Ras-driven cancer.Mazur, Pawel K; Reynoird, Nicolas; Khatri, Purvesh; Jansen, Pascal W T C; Wilkinson, Alex W; Liu, Shichong; Barbash, Olena; Van Aller, Glenn S; Huddleston, Michael; Dhanak, Dashyant; Tummino, Peter J; Kruger, Ryan G; Garcia, Benjamin A; Butte, Atul J; VerNature2014 Jun 12283-724847881
Using Zebrafish to Study Podocyte Genesis During Kidney Development and Regeneration.Kroeger Jr, Paul T; Wingert, Rebecca AGenesis (New York, N.Y. : 2000)2014 Jun 11NULL24920186
Profilin 1 associates with stress granules and ALS-linked mutations alter stress granule dynamics.Figley, Matthew D; Bieri, Gregor; Kolaitis, Regina-Maria; Taylor, J Paul; Gitler, Aaron DThe Journal of neuroscience : the official journal of the Society for Neuroscience2014 Jun 118083-9724920614
Telomeric Overhang Length Determines Structural Dynamics and Accessibility to Telomerase and ALT-Associated Proteins.Hwang, Helen; Kreig, Alex; Calvert, Jacob; Lormand, Justin; Kwon, Yongho; Daley, James M; Sung, Patrick; Opresko, Patricia L; Myong, SuaStructure (London, England : 1993)2014 Jun 10842-5324836024
A Biocompatible Alkene Hydrogenation Merges Organic Synthesis with Microbial Metabolism.Sirasani, Gopal; Tong, Liuchuan; Balskus, Emily PAngewandte Chemie (International ed. in English)2014 Jun 10NULL24916924
Microfluidic device (ExoChip) for on-chip isolation, quantification and characterization of circulating exosomes.Kanwar, Shailender Singh; Dunlay, Christopher James; Simeone, Diane M; Nagrath, SunithaLab on a chip2014 Jun 71891-90024722878
Large-scale, protection-free synthesis of Se-adenosyl-L-selenomethionine analogues and their application as cofactor surrogates of methyltransferases.Bothwell, Ian R; Luo, MinkuiOrganic letters2014 Jun 63056-924852128
The Yin and Yang of Bacterial Resilience in the Human Gut Microbiota.Gibson, Molly K; Pesesky, Mitchell W; Dantas, GautamJournal of molecular biology2014 Jun 6NULL24911583
A Monoclonal Antibody that Targets a NaV1.7 Channel Voltage Sensor for Pain and Itch Relief.Lee, Jun-Ho; Park, Chul-Kyu; Chen, Gang; Han, Qingjian; Xie, Rou-Gang; Liu, Tong; Ji, Ru-Rong; Lee, Seok-YongCell2014 Jun 51393-40424856969
Genetic modulation of soluble A* rescues cognitive and synaptic impairment in a mouse model of Alzheimer's disease.Fowler, Stephanie W; Chiang, Angie C A; Savjani, Ricky R; Larson, Megan E; Sherman, Mathew A; Schuler, Dorothy R; Cirrito, John R; Lesne, Sylvain E; Jankowsky, Joanna LThe Journal of neuroscience : the official journal of the Society for Neuroscience2014 Jun 47871-8524899710
Microfluidic-SERS devices for one shot limit-of-detection.Kim, Donghyuk; Campos, Antonio R; Datt, Ashish; Gao, Zhe; Rycenga, Matthew; Burrows, Nathan D; Greeneltch, Nathan G; Mirkin, Chad A; Murphy, Catherine J; Van Duyne, Richard P; Haynes, Christy LThe Analyst2014 Jun 33227-3424756225
Rapid Antimicrobial Susceptibility Testing with Electrokinetics Enhanced Biosensors for Diagnosis of Acute Bacterial Infections.Liu, Tingting; Lu, Yi; Gau, Vincent; Liao, Joseph C; Wong, Pak KinAnnals of biomedical engineering2014 Jun 3NULL24889716
Teriparatide (PTH 1-34) Treatment Increases Peripheral Hematopoietic Stem Cells in Postmenopausal Women.Yu, Elaine W; Kumbhani, Ruchit; Siwila-Sackman, Erica; DeLelys, Michelle; Preffer, Frederic I; Leder, Benjamin Z; Wu, Joy YJournal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research2014 Jun1380-624420643
Award winner for outstanding research in the PhD category, 2014 Society for Biomaterials annual meeting and exposition, Denver, Colorado, April 16-19, 2014: Decellularized adipose matrix hydrogels stimulate in vivo neovascularization and adipose formationAdam Young, D; Bajaj, Vaibhav; Christman, Karen LJournal of biomedical materials research. Part A2014 Jun1641-5124510423
Evaluation of image registration spatial accuracy using a Bayesian hierarchical model.Liu, Suyu; Yuan, Ying; Castillo, Richard; Guerrero, Thomas; Johnson, Valen EBiometrics2014 Jun366-7724575781
Association of adverse perinatal outcomes with screening measures of obstructive sleep apnea.Antony, K M; Agrawal, A; Arndt, M E; Murphy, A M; Alapat, P M; Guntupalli, K K; Aagaard, K MJournal of perinatology : official journal of the California Perinatal Association2014 Jun441-824603455
Regulatory constraints in the generation and differentiation of IgE-expressing B cells.Yang, Zhiyong; Robinson, Marcus J; Allen, Christopher D CCurrent opinion in immunology2014 Jun64-7024632082
Identification and characterization of small molecules that inhibit nonsense-mediated RNA decay and suppress nonsense p53 mutations.Martin, Leenus; Grigoryan, Arsen; Wang, Ding; Wang, Jinhua; Breda, Laura; Rivella, Stefano; Cardozo, Timothy; Gardner, Lawrence BCancer research2014 Jun 13104-1324662918
Guiding stem cell differentiation into oligodendrocytes using graphene-nanofiber hybrid scaffolds.Shah, Shreyas; Yin, Perry T; Uehara, Thiers M; Chueng, Sy-Tsong Dean; Yang, Letao; Lee, Ki-BumAdvanced materials (Deerfield Beach, Fla.)2014 Jun3673-8024668911
Trigger-responsive, fast-degradable poly(*-amino ester)s for enhanced DNA unpackaging and reduced toxicity.Deng, Xiaojian; Zheng, Nan; Song, Ziyuan; Yin, Lichen; Cheng, JianjunBiomaterials2014 Jun5006-1524674461
The effects of graphene nanostructures on mesenchymal stem cells.Talukdar, Yahfi; Rashkow, Jason T; Lalwani, Gaurav; Kanakia, Shruti; Sitharaman, BalajiBiomaterials2014 Jun4863-7724674462
Fabrication of freestanding alginate microfibers and microstructures for tissue engineering applications.Szymanski, John M; Feinberg, Adam WBiofabrication2014 Jun2410424695323
Pro-atherogenic shear stress and HIV proteins synergistically upregulate cathepsin K in endothelial cells.Parker, Ivana Kennedy; Roberts, Ladeidra Monet; Hansen, Laura; Gleason Jr, Rudolph L; Sutliff, Roy L; Platt, Manu OAnnals of biomedical engineering2014 Jun1185-9424719048
Polar localization of Escherichia coli chemoreceptors requires an intact Tol-Pal complex.Santos, Thiago M A; Lin, Ti-Yu; Rajendran, Madhusudan; Anderson, Samantha M; Weibel, Douglas BMolecular microbiology2014 Jun985-100424720726
A small molecule that binds and inhibits the ETV1 transcription factor oncoprotein.Pop, Marius S; Stransky, Nicolas; Garvie, Colin W; Theurillat, Jean-Philippe; Hartman, Emily C; Lewis, Timothy A; Zhong, Cheng; Culyba, Elizabeth K; Lin, Fallon; Daniels, Douglas S; Pagliarini, Raymond; Ronco, Lucienne; Koehler, Angela N; Garraway, Levi AMolecular cancer therapeutics2014 Jun1492-50224737027
Engineering genetic circuits that compute and remember.Siuti, Piro; Yazbek, John; Lu, Timothy KNature protocols2014 Jun1292-30024810038
Prokaryotic Argonautes defend genomes against invasive DNA.Hur, Junho K; Olovnikov, Ivan; Aravin, Alexei ATrends in biochemical sciences2014 Jun257-924836995
Materials as stem cell regulators.Murphy, William L; McDevitt, Todd C; Engler, Adam JNature materials2014 Jun547-5724845994
Key applications of plant metabolic engineering.Lau, Warren; Fischbach, Michael A; Osbourn, Anne; Sattely, Elizabeth SPLoS biology2014 June100187924915445
Bacteriophage-based synthetic biology for the study of infectious diseases.Citorik, Robert J; Mimee, Mark; Lu, Timothy KCurrent opinion in microbiology2014 Jun59-6924997401
Harnessing CRISPR-Cas9 immunity for genetic engineering.Charpentier, Emmanuelle; Marraffini, Luciano ACurrent opinion in microbiology2014 Jun114-11925048165
Analysis of Mll1-deficiency Identifies Neurogenic Transcriptional Modules and Brn4 as a Factor for Direct Astrocyte-to-neuron Reprogramming.Potts, Matthew B; Siu, Jason J; Price, James D; Salinas, Ryan D; Cho, Mathew J; Ramos, Alexander D; Hahn, Junghyun; Margeta, Marta; Oldham, Michael C; Lim, Daniel ANeurosurgery2014 May 30NULL24887289
Bacterial phylogeny structures soil resistomes across habitats.Forsberg, Kevin J; Patel, Sanket; Gibson, Molly K; Lauber, Christian L; Knight, Rob; Fierer, Noah; Dantas, GautamNature2014 May 29612-624847883
Nanofibrous microposts and microwells of controlled shapes and their hybridization with hydrogels for cell encapsulation.Song, Wei; An, Duo; Kao, Der-I; Lu, Yen-Chun; Dai, Guohao; Chen, Shuibing; Ma, MinglinACS applied materials & interfaces2014 May 287038-4424806031
Intracellular mRNA regulation with self-assembled locked nucleic acid polymer nanoparticles.Rush, Anthony M; Nelles, David A; Blum, Angela P; Barnhill, Sarah A; Tatro, Erick T; Yeo, Gene W; Gianneschi, Nathan CJournal of the American Chemical Society2014 May 287615-824827740
MicroRNA-dependent genetic networks during neural development.Abernathy, Daniel G; Yoo, Andrew SCell and tissue research2014 May 28NULL24865244
Virus-inspired membrane encapsulation of DNA nanostructures to achieve in vivo stability.Perrault, Steven D; Shih, William MACS nano2014 May 275132-4024694301
Near-infrared-induced heating of confined water in polymeric particles for efficient payload release.Viger, Mathieu L; Sheng, Wangzhong; Dore, Kim; Alhasan, Ali H; Carling, Carl-Johan; Lux, Jacques; de Gracia Lux, Caroline; Grossman, Madeleine; Malinow, Roberto; Almutairi, AdahACS nano2014 May 274815-2624717072
Response of Escherichia coli growth rate to osmotic shock.Rojas, Enrique; Theriot, Julie A; Huang, Kerwyn CaseyProceedings of the National Academy of Sciences of the United States of America2014 May 277807-1224821776
Antibodies to PfSEA-1 block parasite egress from RBCs and protect against malaria infection.Raj, Dipak K; Nixon, Christian P; Nixon, Christina E; Dvorin, Jeffrey D; DiPetrillo, Christen G; Pond-Tor, Sunthorn; Wu, Hai-Wei; Jolly, Grant; Pischel, Lauren; Lu, Ailin; Michelow, Ian C; Cheng, Ling; Conteh, Solomon; McDonald, Emily A; Absalon, Sabrina;Science (New York, N.Y.)2014 May 23871-724855263
Acquired resistance of EGFR-mutant lung adenocarcinomas to afatinib plus cetuximab is associated with activation of mTORC1.Pirazzoli, Valentina; Nebhan, Caroline; Song, Xiaoling; Wurtz, Anna; Walther, Zenta; Cai, Guoping; Zhao, Zhongming; Jia, Peilin; de Stanchina, Elisa; Shapiro, Erik M; Gale, Molly; Yin, Ruonan; Horn, Leora; Carbone, David P; Stephens, Philip J; Miller, VinCell reports2014 May 22999-100824813888
Multiplexed and Programmable Regulation of Gene Networks with an Integrated RNA and CRISPR/Cas Toolkit in Human Cells.Nissim, Lior; Perli, Samuel D; Fridkin, Alexandra; Perez-Pinera, Pablo; Lu, Timothy KMolecular cell2014 May 22698-71024837679
Live-cell vibrational imaging of choline metabolites by stimulated Raman scattering coupled with isotope-based metabolic labeling.Hu, Fanghao; Wei, Lu; Zheng, Chaogu; Shen, Yihui; Min, WeiThe Analyst2014 May 212312-724555181
The placenta harbors a unique microbiome.Aagaard, Kjersti; Ma, Jun; Antony, Kathleen M; Ganu, Radhika; Petrosino, Joseph; Versalovic, JamesScience translational medicine2014 May 21237ra6524848255
An acoustofluidic micromixer via bubble inception and cavitation from microchannel sidewalls.Ozcelik, Adem; Ahmed, Daniel; Xie, Yuliang; Nama, Nitesh; Qu, Zhiguo; Nawaz, Ahmad Ahsan; Huang, Tony JunAnalytical chemistry2014 May 205083-824754496
Microfluidic bead suspension hopper.Price, Alexander K; MacConnell, Andrew B; Paegel, Brian MAnalytical chemistry2014 May 205039-4424761972
G-protein-coupled receptors, Hedgehog signaling and primary cilia.Mukhopadhyay, Saikat; Rohatgi, RajatSeminars in cell & developmental biology2014 May 17NULL24845016
CD209a expression on dendritic cells is critical for the development of pathogenic Th17 cell responses in murine schistosomiasis.Ponichtera, Holly E; Shainheit, Mara G; Liu, Beiyun C; Raychowdhury, Raktima; Larkin, Bridget M; Russo, Joanne M; Salantes, D Brenda; Lai, Chao-Qiang; Parnell, Laurence D; Yun, Tae J; Cheong, Cheolho; Bunnell, Stephen C; Hacohen, Nir; Stadecker, Miguel JJournal of immunology (Baltimore, Md. : 1950)2014 May 154655-6524729611
DNA origami structures directly assembled from intact bacteriophages.Nickels, Philipp C; Ke, Yonggang; Jungmann, Ralf; Smith, David M; Leichsenring, Marc; Shih, William M; Liedl, Tim; Hogberg, BjornSmall (Weinheim an der Bergstrasse, Germany)2014 May 141765-924532395
Glucose-containing diblock polycations exhibit molecular weight, charge, and cell-type dependence for pDNA delivery.Wu, Yaoying; Wang, Miao; Sprouse, Dustin; Smith, Adam E; Reineke, Theresa MBiomacromolecules2014 May 121716-2624620753
Restoring systemic GDF11 levels reverses age-related dysfunction in mouse skeletal muscle.Sinha, Manisha; Jang, Young C; Oh, Juhyun; Khong, Danika; Wu, Elizabeth Y; Manohar, Rohan; Miller, Christine; Regalado, Samuel G; Loffredo, Francesco S; Pancoast, James R; Hirshman, Michael F; Lebowitz, Jessica; Shadrach, Jennifer L; Cerletti, MassimilianScience (New York, N.Y.)2014 May 9649-5224797481
Vascular and neurogenic rejuvenation of the aging mouse brain by young systemic factors.Katsimpardi, Lida; Litterman, Nadia K; Schein, Pamela A; Miller, Christine M; Loffredo, Francesco S; Wojtkiewicz, Gregory R; Chen, John W; Lee, Richard T; Wagers, Amy J; Rubin, Lee LScience (New York, N.Y.)2014 May 9630-424797482
Astrocyte-encoded positional cues maintain sensorimotor circuit integrity.Molofsky, Anna V; Kelley, Kevin W; Tsai, Hui-Hsin; Redmond, Stephanie A; Chang, Sandra M; Madireddy, Lohith; Chan, Jonah R; Baranzini, Sergio E; Ullian, Erik M; Rowitch, David HNature2014 May 8189-9424776795
Stepwise recruitment of transcellular and paracellular pathways underlies blood-brain barrier breakdown in stroke.Knowland, Daniel; Arac, Ahmet; Sekiguchi, Kohei J; Hsu, Martin; Lutz, Sarah E; Perrino, John; Steinberg, Gary K; Barres, Ben A; Nimmerjahn, Axel; Agalliu, DritanNeuron2014 May 7603-1724746419
Adapting to new threats: the generation of memory by CRISPR-Cas immune systems.Heler, Robert; Marraffini, Luciano A; Bikard, DavidMolecular microbiology2014 May 7NULL24806524
Quantification of single-cell nanoparticle concentrations and the distribution of these concentrations in cell population.Rashkow, Jason T; Patel, Sunny C; Tappero, Ryan; Sitharaman, BalajiJournal of the Royal Society, Interface / the Royal Society2014 May 62013115224554576
Selection via pluripotency-related transcriptional screen minimizes the influence of somatic origin on iPSC differentiation propensity.Hartjes, Katherine A; Li, Xing; Martinez-Fernandez, Almudena; Roemmich, Alexa J; Larsen, Brandon T; Terzic, Andre; Nelson, Timothy JStem cells (Dayton, Ohio)2014 May 6NULL24802033
Axial standing-wave illumination frequency-domain imaging (SWIF).Judkewitz, Benjamin; Yang, ChanghueiOptics express2014 May 511001-1024921798
Molecular-level functional magnetic resonance imaging of dopaminergic signaling.Lee, Taekwan; Cai, Lili X; Lelyveld, Victor S; Hai, Aviad; Jasanoff, AlanScience (New York, N.Y.)2014 May 2533-524786083
Myeloid Glycosylation Defects Lead to a Spontaneous Common Variable Immunodeficiency-Like Condition with Associated Hemolytic Anemia and Antilymphocyte Autoimmunity.Ryan, Sean O; Abbott, Derek W; Cobb, Brian AJournal of immunology (Baltimore, Md. : 1950)2014 May 2NULL24795453
Multimodal ultrasound-photoacoustic imaging of tissue engineering scaffolds and blood oxygen saturation in and around the scaffolds.Talukdar, Yahfi; Avti, Pramod; Sun, John; Sitharaman, BalajiTissue engineering. Part C, Methods2014 May440-924107069
Cellphone-based devices for bioanalytical sciences.Vashist, Sandeep Kumar; Mudanyali, Onur; Schneider, E Marion; Zengerle, Roland; Ozcan, AydoganAnalytical and bioanalytical chemistry2014 May3263-7724287630
Predictors of depression in youth with Crohn disease.Clark, Jeffrey G; Srinath, Arvind I; Youk, Ada O; Kirshner, Margaret A; McCarthy, F Nicole; Keljo, David J; Bousvaros, Athos; DeMaso, David R; Szigethy, Eva MJournal of pediatric gastroenterology and nutrition2014 May569-7324343281
Depression subtypes in pediatric inflammatory bowel disease.Szigethy, Eva M; Youk, Ada O; Benhayon, David; Fairclough, Diane L; Newara, Melissa C; Kirshner, Margaret A; Bujoreanu, Simona I; Mrakotsky, Christine; Bousvaros, Athos; Srinath, Arvind I; Keljo, David J; Kupfer, David J; DeMaso, David RJournal of pediatric gastroenterology and nutrition2014 May574-8124345836
Translational reprogramming in cellular stress response.Liu, Botao; Qian, Shu-BingWiley interdisciplinary reviews. RNA2014 May301-524375939
Developmental plasticity of red blood cell homeostasis.Golub, Mari S; Hogrefe, Casey E; Malka, Roy; Higgins, John MAmerican journal of hematology2014 May459-6624415575
Neuronal migration is regulated by endogenous RNAi and chromatin-binding factor ZFP-1/AF10 in Caenorhabditis elegans.Kennedy, Lisa M; Grishok, AllaGenetics2014 May207-2024558261
Synthesis and patterning of tunable multiscale materials with engineered cells.Chen, Allen Y; Deng, Zhengtao; Billings, Amanda N; Seker, Urartu O S; Lu, Michelle Y; Citorik, Robert J; Zakeri, Bijan; Lu, Timothy KNature materials2014 May515-2324658114
Reversing deleterious protein aggregation with re-engineered protein disaggregases.Jackrel, Meredith E; Shorter, JamesCell cycle (Georgetown, Tex.)2014 May 11379-8324694655
An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage.Newman, Aaron M; Bratman, Scott V; To, Jacqueline; Wynne, Jacob F; Eclov, Neville C W; Modlin, Leslie A; Liu, Chih Long; Neal, Joel W; Wakelee, Heather A; Merritt, Robert E; Shrager, Joseph B; Loo Jr, Billy W; Alizadeh, Ash A; Diehn, MaximilianNature medicine2014 May548-5424705333
The role of vitamin D in reducing cancer risk and progression.Feldman, David; Krishnan, Aruna V; Swami, Srilatha; Giovannucci, Edward; Feldman, Brian JNature reviews. Cancer2014 May342-5724705652
Comparison of 4-dimensional computed tomography ventilation with nuclear medicine ventilation-perfusion imaging: a clinical validation study.Vinogradskiy, Yevgeniy; Koo, Phillip J; Castillo, Richard; Castillo, Edward; Guerrero, Thomas; Gaspar, Laurie E; Miften, Moyed; Kavanagh, Brian DInternational journal of radiation oncology, biology, physics2014 May 1199-20524725702
One-pot Synthesis of Elastin-like Polypeptide Hydrogels with Grafted VEGF-Mimetic Peptides.Cai, Lei; Dinh, Cong B; Heilshorn, Sarah CBiomaterials science2014 May 1757-76524729868
Turning ecology and evolution against cancer.Korolev, Kirill S; Xavier, Joao B; Gore, JeffNature reviews. Cancer2014 May371-8024739582
In utero exposure to a maternal high-fat dietýýalters the epigenetic histone code in a murine model.Suter, Melissa A; Ma, Jun; Vuguin, Patricia M; Hartil, Kirsten; Fiallo, Ariana; Harris, R Alan; Charron, Maureen J; Aagaard, Kjersti MAmerican journal of obstetrics and gynecology2014 May463.e1-463.e1124793723
Preventable Infections in Children with Leukodystrophy.Anderson, Holly M; Wilkes, Jacob; Korgenski, E Kent; Pulsipher, Michael A; Blaschke, Anne J; Hersh, Adam L; Srivastava, Rajendu; Bonkowsky, Joshua LAnnals of clinical and translational neurology2014 May 1370-37424955379
Statistical modeling of behavioral dynamics during propofol-induced loss of consciousness.Wong, Kin Foon Kevin; Smith, Anne C; Pierce, Eric T; Harrell, P Grace; Walsh, John L; Salazar-Gomez, Andres Felipe; Tavares, Casie L; Purdon, Patrick L; Brown, Emery NJournal of neuroscience methods2014 Apr 3065-7424530701
Multiple facets of TPP1 in telomere maintenance.Rajavel, Malligarjunan; Mullins, Michael R; Taylor, Derek JBiochimica et biophysica acta2014 Apr 26NULL24780581
Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development.Bendall, Sean C; Davis, Kara L; Amir, El-Ad David; Tadmor, Michelle D; Simonds, Erin F; Chen, Tiffany J; Shenfeld, Daniel K; Nolan, Garry P; Pe'er, DanaCell2014 Apr 24714-2524766814
CRISPR-Cas Systems: Prokaryotes Upgrade to Adaptive Immunity.Barrangou, Rodolphe; Marraffini, Luciano AMolecular cell2014 Apr 24234-24424766887
Mapping photothermally induced gene expression in living cells and tissues by nanorod-locked nucleic acid complexes.Riahi, Reza; Wang, Shue; Long, Min; Li, Na; Chiou, Pei-Yu; Zhang, Donna D; Wong, Pak KinACS nano2014 Apr 223597-60524645754
Developmental self-assembly of a DNA tetrahedron.Sadowski, John P; Calvert, Colby R; Zhang, David Yu; Pierce, Niles A; Yin, PengACS nano2014 Apr 223251-924720462
Biodegradable, polymer encapsulated, metal oxide particles for MRI-based cell tracking.Shapiro, Erik MMagnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine2014 Apr 21NULL24753150
The microbiome, parturition, and timing of birth: more questions than answers.Prince, Amanda L; Antony, Kathleen M; Chu, Derrick M; Aagaard, Kjersti MJournal of reproductive immunology2014 Apr 18NULL24793619
Opportunities for merging chemical and biological synthesis.Wallace, Stephen; Balskus, Emily PCurrent opinion in biotechnology2014 Apr 164164724747284
Microfluidics-based in vivo mimetic systems for the study of cellular biology.Kim, Donghyuk; Wu, Xiaojie; Young, Ashlyn T; Haynes, Christy LAccounts of chemical research2014 Apr 151165-7324555566
Congenital lethal motor neuron disease with a novel defect in ribosome biogenesis.Butterfield, Russell J; Stevenson, Tamara J; Xing, Lingyan; Newcomb, Tara M; Nelson, Benjamin; Zeng, Wenqi; Li, Xiang; Lu, Hsiao-Mei; Lu, Hong; Farwell Gonzalez, Kelly D; Wei, Jia-Perng; Chao, Elizabeth C; Prior, Thomas W; Snyder, Pamela J; Bonkowsky, JosNeurology2014 Apr 151322-3024647030
Polypeptides with quaternary phosphonium side chains: synthesis, characterization, and cell-penetrating properties.Song, Ziyuan; Zheng, Nan; Ba, Xiaochu; Yin, Lichen; Zhang, Rujing; Ma, Liang; Cheng, JianjunBiomacromolecules2014 Apr 141491-724635536
Administration of Antenatal Glucocorticoids and Postnatal Surfactant Ameliorates Respiratory Distress Syndrome-Associated Neonatal Lethality in Erk3 (-/-) Mouse Pups.Cuevas Guaman, Milenka; Sbrana, Elena; Shope, Cynthia; Showalter, Lori; Hu, Min; Meloche, Sylvain; Aagaard, KjerstiPediatric research2014 Apr 14NULL24732107
Towards Predictive Models of the Human Gut Microbiome.Bucci, Vanni; Xavier, Joao BJournal of molecular biology2014 Apr 12NULL24727124
Dark-field illumination on zero-mode waveguide/microfluidic hybrid chip reveals T4 replisomal protein interactions.Zhao, Yanhui; Chen, Danqi; Yue, Hongjun; Spiering, Michelle M; Zhao, Chenglong; Benkovic, Stephen J; Huang, Tony JunNano letters2014 Apr 91952-6024628474
Magnetic nanosensors optimized for rapid and reversible self-assembly.Rodriguez, Elisenda; Lelyveld, Victor S; Atanasijevic, Tatjana; Okada, Satoshi; Jasanoff, AlanChemical communications (Cambridge, England)2014 Apr 73595-824566735
Genetically encoding photoswitchable click amino acids in Escherichia coli and mammalian cells.Hoppmann, Christian; Lacey, Vanessa K; Louie, Gordon V; Wei, Jing; Noel, Joseph P; Wang, LeiAngewandte Chemie (International ed. in English)2014 Apr 73932-624615769
Loss of syndecan-1 induces a pro-inflammatory phenotype in endothelial cells with a dysregulated response to atheroprotective flow.Voyvodic, Peter L; Min, Daniel; Liu, Robert; Williams, Evan; Chitalia, Vipul; Dunn, Andrew K; Baker, Aaron BThe Journal of biological chemistry2014 Apr 49547-5924554698
Polyhedra self-assembled from DNA tripods and characterized with 3D DNA-PAINT.Iinuma, Ryosuke; Ke, Yonggang; Jungmann, Ralf; Schlichthaerle, Thomas; Woehrstein, Johannes B; Yin, PengScience (New York, N.Y.)2014 Apr 465-924625926
Tailor made protein synthesis for HSCs.Barna, Maria; Ruggero, DavideCell stem cell2014 Apr 3423-424702992
Solid-State NMR for Bacterial Biofilms.Reichhardt, Courtney; Cegelski, LynetteMolecular physics2014 Apr 3887-89424976646
Accumulation of micron sized iron oxide particles in endothelin-1 induced focal cortical ischemia in rats is independent of cell migration.Granot, Dorit; Shapiro, Erik MMagnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine2014 Apr1568-7423661604
Concise review: Leukemia stem cells in personalized medicine.Guzman, Monica L; Allan, John NStem cells (Dayton, Ohio)2014 Apr844-5124214290
Real-time imaging of Toxoplasma-infected human monocytes under fluidic shear stress reveals rapid translocation of intracellular parasites across endothelial barriers.Ueno, Norikiyo; Harker, Katherine S; Clarke, Elizabeth V; McWhorter, Frances Y; Liu, Wendy F; Tenner, Andrea J; Lodoen, Melissa BCellular microbiology2014 Apr580-9524245749
Designing ECM-mimetic materials using protein engineering.Cai, Lei; Heilshorn, Sarah CActa biomaterialia2014 Apr1751-176024365704
Maintaining skeletal muscle mass: lessons learned from hibernation.Ivakine, Evgueni A; Cohn, Ronald DExperimental physiology2014 Apr632-724443348
Nonclassical transpeptidases of Mycobacterium tuberculosis alter cell size, morphology, the cytosolic matrix, protein localization, virulence, and resistance to *-lactams.Schoonmaker, Maia K; Bishai, William R; Lamichhane, GyanuJournal of bacteriology2014 Apr1394-40224464457
Decellularized scaffolds as a platform for bioengineered organs.Tapias, Luis F; Ott, Harald CCurrent opinion in organ transplantation2014 Apr145-5224480969
Increased severity of tuberculosis in Guinea pigs with type 2 diabetes: a model of diabetes-tuberculosis comorbidity.Podell, Brendan K; Ackart, David F; Obregon-Henao, Andres; Eck, Sarah P; Henao-Tamayo, Marcela; Richardson, Michael; Orme, Ian M; Ordway, Diane J; Basaraba, Randall JThe American journal of pathology2014 Apr1104-1824492198
Denervation atrophy is independent from Akt and mTOR activation and is not rescued by myostatin inhibition.MacDonald, Elizabeth M; Andres-Mateos, Eva; Mejias, Rebeca; Simmers, Jessica L; Mi, Ruifa; Park, Jae-Sung; Ying, Stephanie; Hoke, Ahmet; Lee, Se-Jin; Cohn, Ronald DDisease models & mechanisms2014 Apr471-8124504412
Specificity and efficiency of reporter expression in adult neural progenitors vary substantially among nestin-CreER(T2) lines.Sun, Min-Yu; Yetman, Michael J; Lee, Tang-Cheng; Chen, Yuqing; Jankowsky, Joanna LThe Journal of comparative neurology2014 Apr 11191-20824519019
High risk and rapid appearance of multidrug resistance during tuberculosis treatment in Moldova.Jenkins, Helen E; Crudu, Valeriu; Soltan, Viorel; Ciobanu, Ana; Domente, Liliana; Cohen, TedThe European respiratory journal2014 Apr1132-4124558181
Gold rotor bead tracking for high-speed measurements of DNA twist, torque and extension.Lebel, Paul; Basu, Aakash; Oberstrass, Florian C; Tretter, Elsa M; Bryant, ZevNature methods2014 Apr456-6224562422
Early specification of CD8+ T lymphocyte fates during adaptive immunity revealed by single-cell gene-expression analyses.Arsenio, Janilyn; Kakaradov, Boyko; Metz, Patrick J; Kim, Stephanie H; Yeo, Gene W; Chang, John TNature immunology2014 Apr365-7224584088
Live-cell imaging of alkyne-tagged small biomolecules by stimulated Raman scattering.Wei, Lu; Hu, Fanghao; Shen, Yihui; Chen, Zhixing; Yu, Yong; Lin, Chih-Chun; Wang, Meng C; Min, WeiNature methods2014 Apr410-224584195
A microfluidic-based genetic screen to identify microbial virulence factors that inhibit dendritic cell migration.McLaughlin, Laura M; Xu, Hui; Carden, Sarah E; Fisher, Samantha; Reyes, Monique; Heilshorn, Sarah C; Monack, Denise MIntegrative biology : quantitative biosciences from nano to macro2014 Apr438-4924599496
Cutting edge: resident memory CD8 T cells occupy frontline niches in secondary lymphoid organs.Schenkel, Jason M; Fraser, Kathryn A; Masopust, DavidJournal of immunology (Baltimore, Md. : 1950)2014 Apr 12961-424600038
Mechanical properties of murine and porcine ocular tissues in compression.Worthington, Kristan S; Wiley, Luke A; Bartlett, Alexandra M; Stone, Edwin M; Mullins, Robert F; Salem, Aliasger K; Guymon, C Allan; Tucker, Budd AExperimental eye research2014 Apr194-924613781
Molecular recognition of fluorine impacts substrate selectivity in the fluoroacetyl-CoA thioesterase FlK.Weeks, Amy M; Keddie, Neil S; Wadoux, Rudy D P; O'Hagan, David; Chang, Michelle C YBiochemistry2014 Apr 12053-6324635371
High-resolution antibody dynamics of vaccine-induced immune responses.Laserson, Uri; Vigneault, Francois; Gadala-Maria, Daniel; Yaari, Gur; Uduman, Mohamed; Vander Heiden, Jason A; Kelton, William; Taek Jung, Sang; Liu, Yi; Laserson, Jonathan; Chari, Raj; Lee, Je-Hyuk; Bachelet, Ido; Hickey, Brendan; Lieberman-Aiden, Erez; Proceedings of the National Academy of Sciences of the United States of America2014 Apr 14928-3324639495
Tumor endothelial marker 1-specific DNA vaccination targets tumor vasculature.Facciponte, John G; Ugel, Stefano; De Sanctis, Francesco; Li, Chunsheng; Wang, Liping; Nair, Gautham; Sehgal, Sandy; Raj, Arjun; Matthaiou, Efthymia; Coukos, George; Facciabene, AndreaThe Journal of clinical investigation2014 Apr 11497-51124642465
The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells.Trapnell, Cole; Cacchiarelli, Davide; Grimsby, Jonna; Pokharel, Prapti; Li, Shuqiang; Morse, Michael; Lennon, Niall J; Livak, Kenneth J; Mikkelsen, Tarjei S; Rinn, John LNature biotechnology2014 Apr381-624658644
A time- and matrix-dependent TGFBR3-JUND-KRT5 regulatory circuit in single breast epithelial cells and basal-like premalignancies.Wang, Chun-Chao; Bajikar, Sameer S; Jamal, Leen; Atkins, Kristen A; Janes, Kevin ANature cell biology2014 Apr345-5624658685
Global effects of the CSR-1 RNA interference pathway on the transcriptional landscape.Cecere, Germano; Hoersch, Sebastian; O'Keeffe, Sean; Sachidanandam, Ravi; Grishok, AllaNature structural & molecular biology2014 Apr358-6524681887
Computing global minimizers to a constrained B-spline image registration problem from optimal l1 perturbations to block match data.Castillo, Edward; Castillo, Richard; Fuentes, David; Guerrero, ThomasMedical physics2014 Apr4190424694135
Prdm16 is required for the maintenance of brown adipocyte identity and function in adult mice.Harms, Matthew J; Ishibashi, Jeff; Wang, Wenshan; Lim, Hee-Woong; Goyama, Susumu; Sato, Tomohiko; Kurokawa, Mineo; Won, Kyoung-Jae; Seale, PatrickCell metabolism2014 Apr 1593-60424703692
Adenovirus E4ORF1-induced MYC activation promotes host cell anabolic glucose metabolism and virus replication.Thai, Minh; Graham, Nicholas A; Braas, Daniel; Nehil, Michael; Komisopoulou, Evangelia; Kurdistani, Siavash K; McCormick, Frank; Graeber, Thomas G; Christofk, Heather RCell metabolism2014 Apr 1694-70124703700
Obstructive sleep apnea in pregnancy: reliability of prevalence and prediction estimates.Antony, K M; Agrawal, A; Arndt, M E; Murphy, A M; Alapat, P M; Guntupalli, K K; Aagaard, K MJournal of perinatology : official journal of the California Perinatal Association2014 Mar 27NULL24674980
A dynamically assembled cell wall synthesis machinery buffers cell growth.Lee, Timothy K; Tropini, Carolina; Hsin, Jen; Desmarais, Samantha M; Ursell, Tristan S; Gong, Enhao; Gitai, Zemer; Monds, Russell D; Huang, Kerwyn CaseyProceedings of the National Academy of Sciences of the United States of America2014 Mar 254554-924550500
Immunochromatographic diagnostic test analysis using Google Glass.Feng, Steve; Caire, Romain; Cortazar, Bingen; Turan, Mehmet; Wong, Andrew; Ozcan, AydoganACS nano2014 Mar 253069-7924571349
Emerging role of nanomaterials in circulating tumor cell isolation and analysis.Yoon, Hyeun Joong; Kozminsky, Molly; Nagrath, SunithaACS nano2014 Mar 251995-201724601556
Computational approaches to mapping allosteric pathways.Feher, Victoria A; Durrant, Jacob D; Van Wart, Adam T; Amaro, Rommie ECurrent opinion in structural biology2014 Mar 2298-10324667124
Insights into miRNA regulation of the human glycome.Kasper, Brian T; Koppolu, Sujeethraj; Mahal, Lara KBiochemical and biophysical research communications2014 Mar 21774-924463102
Structure-function relationships of Nile blue (EtNBS) derivatives as antimicrobial photosensitizers.Vecchio, Daniela; Bhayana, Brijesh; Huang, Liyi; Carrasco, Elisa; Evans, Conor L; Hamblin, Michael REuropean journal of medicinal chemistry2014 Mar 21479-9124561676
Structure-guided design of fluorescent S-adenosylmethionine analogs for a high-throughput screen to target SAM-I riboswitch RNAs.Hickey, Scott F; Hammond, Ming CChemistry & biology2014 Mar 20345-5624560607
MRI-Based Detection of Alkaline Phosphatase Gene Reporter Activity Using a Porphyrin Solubility Switch.Westmeyer, Gil G; Emer, Yelena; Lintelmann, Jutta; Jasanoff, AlanChemistry & biology2014 Mar 20422-924613020
Rod-like bacterial shape is maintained by feedback between cell curvature and cytoskeletal localization.Ursell, Tristan S; Nguyen, Jeffrey; Monds, Russell D; Colavin, Alexandre; Billings, Gabriel; Ouzounov, Nikolay; Gitai, Zemer; Shaevitz, Joshua W; Huang, Kerwyn CaseyProceedings of the National Academy of Sciences of the United States of America2014 Mar 18E1025-3424550515
Mapping posttranscriptional regulation of the human glycome uncovers microRNA defining the glycocode.Agrawal, Praveen; Kurcon, Tomasz; Pilobello, Kanoelani T; Rakus, John F; Koppolu, Sujeethraj; Liu, Zhongyin; Batista, Bianca S; Eng, William S; Hsu, Ku-Lung; Liang, Yaxuan; Mahal, Lara KProceedings of the National Academy of Sciences of the United States of America2014 Mar 184338-4324591635
Myosin lever arm directs collective motion on cellular actin network.Hariadi, Rizal F; Cale, Mario; Sivaramakrishnan, SivarajProceedings of the National Academy of Sciences of the United States of America2014 Mar 184091-624591646
Acoustic propulsion of nanorod motors inside living cells.Wang, Wei; Li, Sixing; Mair, Lamar; Ahmed, Suzanne; Huang, Tony Jun; Mallouk, Thomas EAngewandte Chemie (International ed. in English)2014 Mar 173201-424677393
Pivotal role of IL-6 in the hyperinflammatory responses to subacute ozone in adiponectin-deficient mice.Kasahara, David I; Kim, Hye Y; Mathews, Joel A; Verbout, Norah G; Williams, Alison S; Wurmbrand, Allison P; Ninin, Fernanda M C; Neto, Felippe L; Benedito, Leandro A P; Hug, Christopher; Umetsu, Dale T; Shore, Stephanie AAmerican journal of physiology. Lung cellular and molecular physiology2014 Mar 15L508-2024381131
In vivo quantification of lymph viscosity and pressure in lymphatic vessels and draining lymph nodes of arthritic joints in mice.Bouta, Echoe M; Wood, Ronald W; Brown, Edward B; Rahimi, Homaira; Ritchlin, Christopher T; Schwarz, Edward MThe Journal of physiology2014 Mar 151213-2324421350
Titanium-enhanced Raman microcavity laser.Deka, Nishita; Maker, Ashley J; Armani, Andrea MOptics letters2014 Mar 151354-724690786
Complex dynamic substrate control: dual-tone hydrogel photoresists allow double-dissociation of topography and modulus.Xue, Changying; Wong, Darice Y; Kasko, Andrea MAdvanced materials (Deerfield Beach, Fla.)2014 Mar 121577-8324339260
Hyperswarming adaptations in a bacterium improve collective motility without enhancing single cell motility.Deforet, Maxime; van Ditmarsch, Dave; Carmona-Fontaine, Carlos; Xavier, Joao BSoft matter2014 Mar 122405-1324622509
Three-dimensional patterning of multiple cell populations through orthogonal genetic control of cell motility.Mackay, Joanna L; Sood, Anshum; Kumar, SanjaySoft matter2014 Mar 122372-8024622945
Genetic suppression of transgenic APP rescues Hypersynchronous network activity in a mouse model of Alzeimer's disease.Born, Heather A; Kim, Ji-Yoen; Savjani, Ricky R; Das, Pritam; Dabaghian, Yuri A; Guo, Qinxi; Yoo, Jong W; Schuler, Dorothy R; Cirrito, John R; Zheng, Hui; Golde, Todd E; Noebels, Jeffrey L; Jankowsky, Joanna LThe Journal of neuroscience : the official journal of the Society for Neuroscience2014 Mar 123826-4024623762
EFCAB7 and IQCE Regulate Hedgehog Signaling by Tethering the EVC-EVC2 Complex to the Base of Primary Cilia.Pusapati, Ganesh V; Hughes, Casey E; Dorn, Karolin V; Zhang, Dapeng; Sugianto, Priscilla; Aravind, L; Rohatgi, RajatDevelopmental cell2014 Mar 10483-9624582806
Embedded pupil function recovery for Fourier ptychographic microscopy.Ou, Xiaoze; Zheng, Guoan; Yang, ChanghueiOptics express2014 Mar 104960-7224663835
Model for estimating the penetration depth limit of the time-reversed ultrasonically encoded optical focusing technique.Jang, Mooseok; Ruan, Haowen; Judkewitz, Benjamin; Yang, ChanghueiOptics express2014 Mar 105787-80724663917
On-chip evaluation of platelet adhesion and aggregation upon exposure to mesoporous silica nanoparticles.Kim, Donghyuk; Finkenstaedt-Quinn, Solaire; Hurley, Katie R; Buchman, Joseph T; Haynes, Christy LThe Analyst2014 Mar 7906-1324300894
Standing surface acoustic wave (SSAW)-based microfluidic cytometer.Chen, Yuchao; Nawaz, Ahmad Ahsan; Zhao, Yanhui; Huang, Po-Hsun; McCoy, J Phillip; Levine, Stewart J; Wang, Lin; Huang, Tony JunLab on a chip2014 Mar 7916-2324406848
Continuous enrichment of low-abundance cell samples using standing surface acoustic waves (SSAW).Chen, Yuchao; Li, Sixing; Gu, Yeyi; Li, Peng; Ding, Xiaoyun; Wang, Lin; McCoy, J Philip; Levine, Stewart J; Huang, Tony JunLab on a chip2014 Mar 7924-3024413889
Medicine. Combating evolution to fight disease.Rosenberg, Susan M; Queitsch, ChristineScience (New York, N.Y.)2014 Mar 71088-924604189
Common genetic variants modulate pathogen-sensing responses in human dendritic cells.Lee, Mark N; Ye, Chun; Villani, Alexandra-Chloe; Raj, Towfique; Li, Weibo; Eisenhaure, Thomas M; Imboywa, Selina H; Chipendo, Portia I; Ran, F Ann; Slowikowski, Kamil; Ward, Lucas D; Raddassi, Khadir; McCabe, Cristin; Lee, Michelle H; Frohlich, Irene Y; HScience (New York, N.Y.)2014 Mar 7124698024604203
Disruption of helix-capping residues 671 and 674 reveals a role in HIV-1 entry for a specialized hinge segment of the membrane proximal external region of gp41.Sun, Zhen-Yu J; Cheng, Yuxing; Kim, Mikyung; Song, Likai; Choi, Jaewon; Kudahl, Ulrich J; Brusic, Vladimir; Chowdhury, Barnali; Yu, Lu; Seaman, Michael S; Bellot, Gaetan; Shih, William M; Wagner, Gerhard; Reinherz, Ellis LJournal of molecular biology2014 Mar 61095-10824075869
DksA Guards Elongating RNA Polymerase against Ribosome-Stalling-Induced Arrest.Zhang, Yan; Mooney, Rachel A; Grass, Jeffrey A; Sivaramakrishnan, Priya; Herman, Christophe; Landick, Robert; Wang, Jue DMolecular cell2014 Mar 6766-7824606919
Neutron-encoded mass signatures for quantitative top-down proteomics.Rhoads, Timothy W; Rose, Christopher M; Bailey, Derek J; Riley, Nicholas M; Molden, Rosalynn C; Nestler, Amelia J; Merrill, Anna E; Smith, Lloyd M; Hebert, Alexander S; Westphall, Michael S; Pagliarini, David J; Garcia, Benjamin A; Coon, Joshua JAnalytical chemistry2014 Mar 42314-924475910
Scaffold-mediated lentiviral transduction for functional tissue engineering of cartilage.Brunger, Jonathan M; Huynh, Nguyen P T; Guenther, Caitlin M; Perez-Pinera, Pablo; Moutos, Franklin T; Sanchez-Adams, Johannah; Gersbach, Charles A; Guilak, FarshidProceedings of the National Academy of Sciences of the United States of America2014 Mar 4E798-80624550481
Effects of polymerization and nucleotide identity on the conformational dynamics of the bacterial actin homolog MreB.Colavin, Alexandre; Hsin, Jen; Huang, Kerwyn CaseyProceedings of the National Academy of Sciences of the United States of America2014 Mar 43585-9024550504
Click-Assembled, Oxygen-Sensing Nanoconjugates for Depth-Resolved, Near-Infrared Imaging in a 3ýýýD Cancer Model.Nichols, Alexander J; Roussakis, Emmanuel; Klein, Oliver J; Evans, Conor LAngewandte Chemie (International ed. in English)2014 Mar 3NULL24590700
Novel molecular pathways in Gorham disease: implications for treatment.Hagendoorn, Jeroen; Yock, Torunn I; Borel Rinkes, Inne H M; Padera, Timothy P; Ebb, David HPediatric blood & cancer2014 Mar401-624214028
Segmentation of PET images for computer-aided functional quantification of tuberculosis in small animal models.Foster, Brent; Bagci, Ulas; Ziyue Xu; Dey, Bappaditya; Luna, Brian; Bishai, William; Jain, Sanjay; Mollura, Daniel JIEEE transactions on bio-medical engineering2014 Mar711-2424235292
Novel adjunctive therapies for the treatment of tuberculosis.Ordonez, A A; Maiga, M; Gupta, S; Weinstein, E A; Bishai, W R; Jain, S KCurrent molecular medicine2014 Mar385-9524236454
Mgat2 ablation in the myeloid lineage leads to defective glycoantigen T cell responses.Ryan, Sean O; Leal Jr, Sixto M; Abbott, Derek W; Pearlman, Eric; Cobb, Brian AGlycobiology2014 Mar262-7124310166
Persisters and beyond: mechanisms of phenotypic drug resistance and drug tolerance in bacteria.Kester, Jemila C; Fortune, Sarah MCritical reviews in biochemistry and molecular biology2014 Mar-Apr91-10124328927
Inside scoop on outside proteins.Dvorin, Jeffrey DInfection and immunity2014 Mar921-324343655
Perfusion decellularization of human and porcine lungs: bringing the matrix to clinical scale.Gilpin, Sarah Elizabeth; Guyette, Jacques P; Gonzalez, Gabriel; Ren, Xi; Asara, John M; Mathisen, Douglas J; Vacanti, Joseph P; Ott, Harald CThe Journal of heart and lung transplantation : the official publication of the International Society for Heart Transplantation2014 Mar298-30824365767
Genetic basis for vancomycin-enhanced cephalosporin susceptibility in vancomycin-resistant enterococci revealed using counterselection with dominant-negative thymidylate synthase.Kristich, Christopher J; Djoric, Dusanka; Little, Jaime LAntimicrobial agents and chemotherapy2014 Mar1556-6424366749
Identification of HilD-regulated genes in Salmonella enterica serovar Typhimurium.Petrone, Brianna L; Stringer, Anne M; Wade, Joseph TJournal of bacteriology2014 Mar1094-10124375101
Sleep deprivation during a specific 3-hour time window post-training impairs hippocampal synaptic plasticity and memory.Prince, Toni-Moi; Wimmer, Mathieu; Choi, Jennifer; Havekes, Robbert; Aton, Sara; Abel, TedNeurobiology of learning and memory2014 Mar122-3024380868
A microscopy-based screen employing multiplex genome sequencing identifies cargo-specific requirements for dynein velocity.Tan, Kaeling; Roberts, Anthony J; Chonofsky, Mark; Egan, Martin J; Reck-Peterson, Samara LMolecular biology of the cell2014 Mar669-7824403603
A Crowdsourced nucleus: Understanding nuclear organization in terms of dynamically networked protein function.Wood, Ashley M; Garza-Gongora, Arturo G; Kosak, Steven TBiochimica et biophysica acta2014 Mar178-19024412853
Geometric control of capillary architecture via cell-matrix mechanical interactions.Sun, Jian; Jamilpour, Nima; Wang, Fei-Yue; Wong, Pak KinBiomaterials2014 Mar3273-8024439400
The effect of side-chain functionality and hydrophobicity on the gene delivery capabilities of cationic helical polypeptides.Zhang, Rujing; Zheng, Nan; Song, Ziyuan; Yin, Lichen; Cheng, JianjunBiomaterials2014 Mar3443-5424439403
Effects of maternal care on the development of midbrain dopamine pathways and reward-directed behavior in female offspring.Pena, Catherine Jensen; Neugut, Yael D; Calarco, Cali A; Champagne, Frances AThe European journal of neuroscience2014 Mar946-5624446918
Mesenchymal progenitors and the osteoblast lineage in bone marrow hematopoietic niches.Panaroni, Cristina; Tzeng, Yi-Shiuan; Saeed, Hamid; Wu, Joy YCurrent osteoporosis reports2014 Mar22-3224477415
Direct effect of sodium iodate on neurosensory retina.Wang, Jinmei; Iacovelli, Jared; Spencer, Carrie; Saint-Geniez, MagaliInvestigative ophthalmology & visual science2014 Mar1941-5324481259
Multiplexed 3D cellular super-resolution imaging with DNA-PAINT and Exchange-PAINT.Jungmann, Ralf; Avendano, Maier S; Woehrstein, Johannes B; Dai, Mingjie; Shih, William M; Yin, PengNature methods2014 Mar313-824487583
Single continuous lumen formation in the zebrafish gut is mediated by smoothened-dependent tissue remodeling.Alvers, Ashley L; Ryan, Sean; Scherz, Paul J; Huisken, Jan; Bagnat, MichelDevelopment (Cambridge, England)2014 Mar1110-924504339
Independent optical excitation of distinct neural populations.Klapoetke, Nathan C; Murata, Yasunobu; Kim, Sung Soo; Pulver, Stefan R; Birdsey-Benson, Amanda; Cho, Yong Ku; Morimoto, Tania K; Chuong, Amy S; Carpenter, Eric J; Tian, Zhijian; Wang, Jun; Xie, Yinlong; Yan, Zhixiang; Zhang, Yong; Chow, Brian Y; Surek, BaNature methods2014 Mar338-4624509633
Structural and biochemical analyses of choroidal thickness in human donor eyes.Sohn, Elliott H; Khanna, Aditi; Tucker, Budd A; Abramoff, Michael D; Stone, Edwin M; Mullins, Robert FInvestigative ophthalmology & visual science2014 Mar1352-6024519422
Porous poly(ýý-caprolactone) scaffolds for retinal pigment epithelium transplantation.McHugh, Kevin J; Tao, Sarah L; Saint-Geniez, MagaliInvestigative ophthalmology & visual science2014 Mar1754-6224550370
Mechanical control of the sense of touch by *-spectrin.Krieg, Michael; Dunn, Alexander R; Goodman, Miriam BNature cell biology2014 Mar224-3324561618
Photoreceptor cells with profound structural deficits can support useful vision in mice.Thompson, Stewart; Blodi, Frederick R; Lee, Swan; Welder, Chris R; Mullins, Robert F; Tucker, Budd A; Stasheff, Steven F; Stone, Edwin MInvestigative ophthalmology & visual science2014 Mar1859-6624569582
Metagenomic systems biology and metabolic modeling of the human microbiome: from species composition to community assembly rules.Levy, Roie; Borenstein, ElhananGut microbes2014 Mar-Apr265-7024637600
An insulin-to-insulin regulatory network orchestrates phenotypic specificity in development and physiology.Fernandes de Abreu, Diana Andrea; Caballero, Antonio; Fardel, Pascal; Stroustrup, Nicholas; Chen, Zhunan; Lee, Kyunghwa; Keyes, William D; Nash, Zachary M; Lopez-Moyado, Isaac F; Vaggi, Federico; Cornils, Astrid; Regenass, Martin; Neagu, Anca; Ostojic, IvPLoS genetics2014 Mare100422524675767
Detection and spatial mapping of mercury contamination in water samples using a smart-phone.Wei, Qingshan; Nagi, Richie; Sadeghi, Kayvon; Feng, Steve; Yan, Eddie; Ki, So Jung; Caire, Romain; Tseng, Derek; Ozcan, AydoganACS nano2014 Feb 251121-924437470
Multi-Target Drug Discovery for Tuberculosis and Other Infectious Diseases.Li, Kai; Schurig-Briccio, Lici A; Feng, Xinxin; Upadhyay, Ashutosh; Pujari, Venugopal; Lechartier, Benoit; Fontes, Fabio L; Yang, Hongliang; Rao, Guodong; Zhu, Wei; Gulati, Anmol; No, Joo Hwan; Cintra, Giovana; Bogue, Shannon; Liu, Yi-Liang; Molohon, KatiJournal of medicinal chemistry2014 Feb 25NULL24568559
Time- and concentration-dependent effects of exogenous serotonin and inflammatory cytokines on mast cell function.Gruba, Sarah M; Meyer, Audrey F; Manning, Benjamin M; Wang, Yiwen; Thompson, John W; Dalluge, Joseph J; Haynes, Christy LACS chemical biology2014 Feb 21503-924304209
Rare cell isolation and analysis in microfluidics.Chen, Yuchao; Li, Peng; Huang, Po-Hsun; Xie, Yuliang; Mai, John D; Wang, Lin; Nguyen, Nam-Trung; Huang, Tony JunLab on a chip2014 Feb 21626-4524406985
Digital and analog gene circuits for biotechnology.Roquet, Nathaniel; Lu, Timothy KBiotechnology journal2014 Feb 20NULL24677719
Proximity-enabled protein crosslinking through genetically encoding haloalkane unnatural amino acids.Xiang, Zheng; Lacey, Vanessa K; Ren, Haiyan; Xu, Jing; Burban, David J; Jennings, Patricia A; Wang, LeiAngewandte Chemie (International ed. in English)2014 Feb 172190-324449339
The Genome of the Clonal Raider Ant Cerapachys biroi.Oxley, Peter R; Ji, Lu; Fetter-Pruneda, Ingrid; McKenzie, Sean K; Li, Cai; Hu, Haofu; Zhang, Guojie; Kronauer, Daniel J CCurrent biology : CB2014 Feb 17451-824508170
Energy Storage via Polyvinylidene Fluoride Dielectric on the Counterelectrode of Dye-Sensitized Solar Cells.Huang, Xuezhen; Zhang, Xi; Jiang, HongruiJournal of power sources2014 Feb 15NULL24327797
EGFRvIII mCAR-Modified T-Cell Therapy Cures Mice with Established Intracerebral Glioma and Generates Host Immunity against Tumor-Antigen Loss.Sampson, John H; Choi, Bryan D; Sanchez-Perez, Luis; Suryadevara, Carter M; Snyder, David J; Flores, Catherine T; Schmittling, Robert J; Nair, Smita K; Reap, Elizabeth A; Norberg, Pamela K; Herndon 2nd, James E; Kuan, Chien-Tsun; Morgan, Richard A; RosenbClinical cancer research : an official journal of the American Association for Cancer Research2014 Feb 15972-8424352643
Flash memory: photochemical imprinting of neuronal action potentials onto a microbial rhodopsin.Venkatachalam, Veena; Brinks, Daan; Maclaurin, Dougal; Hochbaum, Daniel; Kralj, Joel; Cohen, Adam EJournal of the American Chemical Society2014 Feb 122529-3724428326
Clinical Exome Sequencing Identifies a Novel TUBB4A Mutation in a Child With Static Hypomyelinating Leukodystrophy.Purnell, Shawn M; Bleyl, Steven B; Bonkowsky, Joshua LPediatric neurology2014 Feb 10NULL24742798
Independent optical excitation of distinct neural populations.Klapoetke, Nathan C; Murata, Yasunobu; Kim, Sung Soo; Pulver, Stefan R; Birdsey-Benson, Amanda; Cho, Yong Ku; Morimoto, Tania K; Chuong, Amy S; Carpenter, Eric J; Tian, Zhijian; Wang, Jun; Xie, Yinlong; Yan, Zhixiang; Zhang, Yong; Chow, Brian Y; Surek, BaNature methods2014 Feb 9NULL24509633
A highly sensitive targeted mass spectrometric assay for quantification of AGR2 protein in human urine and serum.Shi, Tujin; Gao, Yuqian; Quek, Sue Ing; Fillmore, Thomas L; Nicora, Carrie D; Su, Dian; Zhao, Rui; Kagan, Jacob; Srivastava, Sudhir; Rodland, Karin D; Liu, Tao; Smith, Richard D; Chan, Daniel W; Camp 2nd, David G; Liu, Alvin Y; Qian, Wei-JunJournal of proteome research2014 Feb 7875-8224251762
Parameterizing cell-to-cell regulatory heterogeneities via stochastic transcriptional profiles.Bajikar, Sameer S; Fuchs, Christiane; Roller, Andreas; Theis, Fabian J; Janes, Kevin AProceedings of the National Academy of Sciences of the United States of America2014 Feb 4E626-3524449900
IGF promotes cardiac lineage induction in vitro by selective expansion of early mesoderm.Engels, Marc C; Rajarajan, Kuppusamy; Feistritzer, Rebecca; Sharma, Arun; Nielsen, Ulrik B; Schalij, Martin J; de Vries, Antoine A F; Pijnappels, Daniel A; Wu, Sean MStem cells (Dayton, Ohio)2014 Feb 4NULL24496962
Temporal dynamics of microbial rhodopsin fluorescence reports absolute membrane voltage.Hou, Jennifer H; Venkatachalam, Veena; Cohen, Adam EBiophysical journal2014 Feb 4639-4824507604
Flexible micro spring array device for high-throughput enrichment of viable circulating tumor cells.Harouaka, Ramdane A; Zhou, Ming-Da; Yeh, Yin-Ting; Khan, Waleed J; Das, Avisnata; Liu, Xin; Christ, Christine C; Dicker, David T; Baney, Tara S; Kaifi, Jussuf T; Belani, Chandra P; Truica, Cristina I; El-Deiry, Wafik S; Allerton, Jeffrey P; Zheng, Si-YangClinical chemistry2014 Feb323-3324132944
Circulating tumor cells: advances in isolation and analysis, and challenges for clinical applications.Harouaka, Ramdane; Kang, Zhigang; Zheng, Si-Yang; Cao, LiangPharmacology & therapeutics2014 Feb209-2124134902
Nutritional control of antibiotic resistance via an interface between the phosphotransferase system and a two-component signaling system.Snyder, Holly; Kellogg, Stephanie L; Skarda, Laura M; Little, Jaime L; Kristich, Christopher JAntimicrobial agents and chemotherapy2014 Feb957-6524277024
Zebrafish nephrogenesis is regulated by interactions between retinoic acid, mecom, and Notch signaling.Li, Yue; Cheng, Christina N; Verdun, Valerie A; Wingert, Rebecca ADevelopmental biology2014 Feb 1111-2224309209
Cancer-derived mutations in KEAP1 impair NRF2 degradation but not ubiquitination.Hast, Bridgid E; Cloer, Erica W; Goldfarb, Dennis; Li, Heng; Siesser, Priscila F; Yan, Feng; Walter, Vonn; Zheng, Ning; Hayes, D Neil; Major, Michael BCancer research2014 Feb 1808-1724322982
Substrates with patterned extracellular matrix and subcellular stiffness gradients reveal local biomechanical responses.Tseng, Peter; Di Carlo, DinoAdvanced materials (Deerfield Beach, Fla.)2014 Feb1242-724323894
Proteomic identification and quantification of S-glutathionylation in mouse macrophages using resin-assisted enrichment and isobaric labeling.Su, Dian; Gaffrey, Matthew J; Guo, Jia; Hatchell, Kayla E; Chu, Rosalie K; Clauss, Therese R W; Aldrich, Joshua T; Wu, Si; Purvine, Sam; Camp, David G; Smith, Richard D; Thrall, Brian D; Qian, Wei-JunFree radical biology & medicine2014 Feb460-7024333276
The identification of novel potential injury mechanisms and candidate biomarkers in renal allograft rejection by quantitative proteomics.Sigdel, Tara K; Salomonis, Nathan; Nicora, Carrie D; Ryu, Soyoung; He, Jintang; Dinh, Van; Orton, Daniel J; Moore, Ronald J; Hsieh, Szu-Chuan; Dai, Hong; Thien-Vu, Minh; Xiao, Wenzhong; Smith, Richard D; Qian, Wei-Jun; Camp 2nd, David G; Sarwal, Minnie MMolecular & cellular proteomics : MCP2014 Feb621-3124335474
Therapeutic modulation of eIF2* phosphorylation rescues TDP-43 toxicity in amyotrophic lateral sclerosis disease models.Kim, Hyung-Jun; Raphael, Alya R; Ladow, Eva S; McGurk, Leeanne; Weber, Ross A; Trojanowski, John Q; Lee, Virginia M-Y; Finkbeiner, Steven; Gitler, Aaron D; Bonini, Nancy MNature genetics2014 Feb152-6024336168
Single cell gene expression analysis in injury-induced collective cell migration.Riahi, Reza; Long, Min; Yang, Yongliang; Dean, Zachary; Zhang, Donna D; Slepian, Marvin J; Wong, Pak KinIntegrative biology : quantitative biosciences from nano to macro2014 Feb192-20224336811
Engineering of three-dimensional microenvironments to promote contractile behavior in primary intestinal organoids.DiMarco, Rebecca L; Su, James; Yan, Kelley S; Dewi, Ruby; Kuo, Calvin J; Heilshorn, Sarah CIntegrative biology : quantitative biosciences from nano to macro2014 Feb127-4224343706
Widespread suppression of intragenic transcription initiation by H-NS.Singh, Shivani S; Singh, Navjot; Bonocora, Richard P; Fitzgerald, Devon M; Wade, Joseph T; Grainger, David CGenes & development2014 Feb 1214-924449106
Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre.Hacisuleyman, Ezgi; Goff, Loyal A; Trapnell, Cole; Williams, Adam; Henao-Mejia, Jorge; Sun, Lei; McClanahan, Patrick; Hendrickson, David G; Sauvageau, Martin; Kelley, David R; Morse, Michael; Engreitz, Jesse; Lander, Eric S; Guttman, Mitch; Lodish, HarveyNature structural & molecular biology2014 Feb198-20624463464
Computational imaging, sensing and diagnostics for global health applications.Coskun, Ahmet F; Ozcan, AydoganCurrent opinion in biotechnology2014 Feb16-Aug24484875
Advances in high-throughput single-cell microtechnologies.Weaver, Westbrook M; Tseng, Peter; Kunze, Anja; Masaeli, Mahdokht; Chung, Aram J; Dudani, Jaideep S; Kittur, Harsha; Kulkarni, Rajan P; Di Carlo, DinoCurrent opinion in biotechnology2014 Feb114-2324484889
International consensus criteria for the diagnosis of Raynaud's phenomenon.Maverakis, Emanual; Patel, Forum; Kronenberg, Daniel G; Chung, Lorinda; Fiorentino, David; Allanore, Yannick; Guiducci, Serena; Hesselstrand, Roger; Hummers, Laura K; Duong, Chris; Kahaleh, Bashar; Macgregor, Alexander; Matucci-Cerinic, Marco; Wollheim, FJournal of autoimmunity2014 Feb-Mar60-524491823
Speech map in the human ventral sensory-motor cortex.Conant, David; Bouchard, Kristofer E; Chang, Edward FCurrent opinion in neurobiology2014 Feb63-6724492080
Olfactory maps, circuits and computations.Giessel, Andrew J; Datta, Sandeep RobertCurrent opinion in neurobiology2014 Feb120-13224492088
Big data in the new media environment.O'Donnell, Matthew Brook; Falk, Emily B; Konrath, SaraThe Behavioral and brain sciences2014 Feb94-524572235
Impact of CRISPR immunity on the emergence and virulence of bacterial pathogens.Hatoum-Aslan, Asma; Marraffini, Luciano ACurrent opinion in microbiology2014 Feb82-9024581697
Mating induces shrinking and death in Caenorhabditis mothers.Shi, Cheng; Murphy, Coleen TScience (New York, N.Y.)2014 Jan 31536-4024356112
DNA Damage Triggers Golgi Dispersal via DNA-PK and GOLPH3.Farber-Katz, Suzette E; Dippold, Holly C; Buschman, Matthew D; Peterman, Marshall C; Xing, Mengke; Noakes, Christopher J; Tat, John; Ng, Michelle M; Rahajeng, Juliati; Cowan, David M; Fuchs, Greg J; Zhou, Huilin; Field, Seth JCell2014 Jan 30413-2724485452
Intrapartum Magnesium Sulfate and the Potential for Cardiopulmonary Drug-Drug Interactions.Campbell, Sarah C; Stockmann, Chris; Balch, Alfred; Clark, Erin A S; Kamyar, Manijeh; Varner, Michael; Korgenski, E Kent; Bonkowsky, Joshua L; Spigarelli, Michael G; Sherwin, Catherine M TTherapeutic drug monitoring2014 Jan 30NULL24487252
Dynamics of soft nanomaterials captured by transmission electron microscopy in liquid water.Proetto, Maria T; Rush, Anthony M; Chien, Miao-Ping; Abellan Baeza, Patricia; Patterson, Joseph P; Thompson, Matthew P; Olson, Norman H; Moore, Curtis E; Rheingold, Arnold L; Andolina, Christopher; Millstone, Jill; Howell, Stephen B; Browning, Nigel D; EvJournal of the American Chemical Society2014 Jan 291162-524422495
Three-dimensional hydrodynamic focusing method for polyplex synthesis.Lu, Mengqian; Ho, Yi-Ping; Grigsby, Christopher L; Nawaz, Ahmad Ahsan; Leong, Kam W; Huang, Tony JunACS nano2014 Jan 28332-924341632
Evolutionary genetics and implications of small size and twinning in callitrichine primates.Harris, R Alan; Tardif, Suzette D; Vinar, Tomas; Wildman, Derek E; Rutherford, Julienne N; Rogers, Jeffrey; Worley, Kim C; Aagaard, Kjersti MProceedings of the National Academy of Sciences of the United States of America2014 Jan 281467-7224379383
Theory and experiment on particle trapping and manipulation via optothermally generated bubbles.Zhao, Chenglong; Xie, Yuliang; Mao, Zhangming; Zhao, Yanhui; Rufo, Joseph; Yang, Shikuan; Guo, Feng; Mai, John D; Huang, Tony JunLab on a chip2014 Jan 21384-9124276624
Sub-micrometer-precision, three-dimensional (3D) hydrodynamic focusing via "microfluidic drifting".Nawaz, Ahmad Ahsan; Zhang, Xiangjun; Mao, Xiaole; Rufo, Joseph; Lin, Sz-Chin Steven; Guo, Feng; Zhao, Yanhui; Lapsley, Michael; Li, Peng; McCoy, J Philip; Levine, Stewart J; Huang, Tony JunLab on a chip2014 Jan 21415-2324287742
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Comprehensive evaluation of peripheral nerve regeneration in the acute healing phase using tissue clearing and optical microscopy in a rodent model.Jung, Yookyung; Ng, Joanna H; Keating, Cameron P; Senthil-Kumar, Prabhu; Zhao, Jie; Randolph, Mark A; Winograd, Jonathan M; Evans, Conor LPloS one2014e9405424714405
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Thioridazine pharmacokinetic-pharmacodynamic parameters "Wobble" during treatment of tuberculosis: a theoretical basis for shorter-duration curative monotherapy with congeners.Musuka, Sandirai; Srivastava, Shashikant; Siyambalapitiyage Dona, Chandima Wasana; Meek, Claudia; Leff, Richard; Pasipanodya, Jotam; Gumbo, TawandaAntimicrobial agents and chemotherapy2013 Dec5870-724041886
The putative Poc complex controls two distinct Pseudomonas aeruginosa polar motility mechanisms.Cowles, Kimberly N; Moser, Theresa S; Siryaporn, Albert; Nyakudarika, Natsai; Dixon, William; Turner, Jonathan J; Gitai, ZemerMolecular microbiology2013 Dec923-3824102920
Requirement of essential Pbp2x and GpsB for septal ring closure in Streptococcus pneumoniae D39.Land, Adrian D; Tsui, Ho-Ching T; Kocaoglu, Ozden; Vella, Stephen A; Shaw, Sidney L; Keen, Susan K; Sham, Lok-To; Carlson, Erin E; Winkler, Malcolm EMolecular microbiology2013 Dec939-5524118410
Highly efficient gate-tunable photocurrent generation in vertical heterostructures of layered materials.Yu, Woo Jong; Liu, Yuan; Zhou, Hailong; Yin, Anxiang; Li, Zheng; Huang, Yu; Duan, XiangfengNature nanotechnology2013 Dec952-824162001
Novel vaccine strategies against tuberculosis: a road less travelled.Pokkali, Supriya; Jain, SanjayExpert review of vaccines2013 Dec1373-524195477
What Lives On Our Skin: Ecology, Genomics and Therapeutic Opportunities Of the Skin Microbiome.Scharschmidt, Tiffany C; Fischbach, Michael ADrug discovery today. Disease mechanisms2013 Dec 1NULL24273587
NKG2C, HLA-E and their association with psoriasis.Patel, Forum; Marusina, Alina I; Duong, Christopher; Adamopoulos, Iannis E; Maverakis, EmanualExperimental dermatology2013 Dec797-924279916
Long nonoding RNAs in the X-inactivation center.Maclary, Emily; Hinten, Michael; Harris, Clair; Kalantry, SundeepChromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology2013 Dec601-1424297756
The antidepressant desipramine and *2-adrenergic receptor activation promote breast tumor progression in association with altered collagen structure.Szpunar, Mercedes J; Burke, Kathleen A; Dawes, Ryan P; Brown, Edward B; Madden, Kelley SCancer prevention research (Philadelphia, Pa.)2013 Dec1262-7224309563
Understanding variation in transcription factor binding by modeling transcription factor genome-epigenome interactions.Chen, Chieh-Chun; Xiao, Shu; Xie, Dan; Cao, Xiaoyi; Song, Chun-Xiao; Wang, Ting; He, Chuan; Zhong, ShengPLoS computational biology2013 Dece100336724339764
Ecological modeling from time-series inference: insight into dynamics and stability of intestinal microbiota.Stein, Richard R; Bucci, Vanni; Toussaint, Nora C; Buffie, Charlie G; Ratsch, Gunnar; Pamer, Eric G; Sander, Chris; Xavier, Joao BPLoS computational biology2013 Dece100338824348232
CRISPR-Cas immunity against phages: its effects on the evolution and survival of bacterial pathogens.Marraffini, Luciano APLoS pathogens2013 Dece100376524348245
Penicillin-binding protein imaging probes.Kocaoglu, Ozden; Carlson, Erin ECurrent protocols in chemical biology2013 Dec 1239-5024391095
Graphene-based contrast agents for photoacoustic and thermoacoustic tomography.Lalwani, Gaurav; Cai, Xin; Nie, Liming; Wang, Lihong V; Sitharaman, BalajiPhotoacoustics2013 Dec 162-6724490141
Emergence of spatial structure in the tumor microenvironment due to the Warburg effect.Carmona-Fontaine, Carlos; Bucci, Vanni; Akkari, Leila; Deforet, Maxime; Joyce, Johanna A; Xavier, Joao BProceedings of the National Academy of Sciences of the United States of America2013 Nov 2619402-724218566
Genome-Scale Analyses of Escherichia coli and Salmonella enterica AraC Reveal Non-Canonical Targets and an Expanded Core Regulon.Stringer, Anne M; Currenti, Salvatore; Bonocora, Richard P; Baranowski, Catherine; Petrone, Brianna L; Palumbo, Michael J; Reilly, Andrew E; Zhang, Zhen; Erill, Ivan; Wade, Joseph TJournal of bacteriology2013 Nov 22NULL24272778
The role of p38 MAPK in neutrophil functions: single cell chemotaxis and surface marker expression.Kim, Donghyuk; Haynes, Christy LThe Analyst2013 Nov 216826-3324061073
Giga-pixel fluorescent imaging over an ultra-large field-of-view using a flatbed scanner.Gorocs, Zoltan; Ling, Yuye; Yu, Meng Dai; Karahalios, Dimitri; Mogharabi, Kian; Lu, Kenny; Wei, Qingshan; Ozcan, AydoganLab on a chip2013 Nov 214460-624080766
Fear extinction causes target-specific remodeling of perisomatic inhibitory synapses.Trouche, Stephanie; Sasaki, Jennifer M; Tu, Tiffany; Reijmers, Leon GNeuron2013 Nov 201054-6524183705
On-chip evaluation of neutrophil activation and neutrophil-endothelial cell interaction during neutrophil chemotaxis.Kim, Donghyuk; Haynes, Christy LAnalytical chemistry2013 Nov 1910787-9624127752
Sum of the parts: composition and architecture of the bacterial extracellular matrix.McCrate, Oscar A; Zhou, Xiaoxue; Reichhardt, Courtney; Cegelski, LynetteJournal of molecular biology2013 Nov 154286-9423827139
Centromeric motion facilitates the mobility of interphase genomic regions in fission yeast.Kim, Kyoung-Dong; Tanizawa, Hideki; Iwasaki, Osamu; Corcoran, Christopher J; Capizzi, Joseph R; Hayden, James E; Noma, Ken-IchiJournal of cell science2013 Nov 155271-8323986481
Exploring binding and effector functions of natural human antibodies using synthetic immunomodulators.Jakobsche, Charles E; Parker, Christopher G; Tao, Ran N; Kolesnikova, Mariya D; Douglass Jr, Eugene F; Spiegel, David AACS chemical biology2013 Nov 152404-1124053626
Monitoring DNA hybridization using optical microcavities.Hawk, Rasheeda M; Chistiakova, Maria V; Armani, Andrea MOptics letters2013 Nov 154690-324322107
A fluorescent peroxidase probe increases the sensitivity of commercial ELISAs by two orders of magnitude.Acharya, Abhinav P; Nafisi, Parsa M; Gardner, Austin; Mackay, Joanna L; Kundu, Kousik; Kumar, Sanjay; Murthy, NirenChemical communications (Cambridge, England)2013 Nov 1410379-8124071916
Innate and adaptive immunity interact to quench microbiome flagellar motility in the gut.Cullender, Tyler C; Chassaing, Benoit; Janzon, Anders; Kumar, Krithika; Muller, Catherine E; Werner, Jeffrey J; Angenent, Largus T; Bell, M Elizabeth; Hay, Anthony G; Peterson, Daniel A; Walter, Jens; Vijay-Kumar, Matam; Gewirtz, Andrew T; Ley, Ruth ECell host & microbe2013 Nov 13571-8124237702
Highlighting the role of polymer length, carbohydrate size, and nucleic acid type in potency of glycopolycation agents for pDNA and siRNA delivery.Xue, Lian; Ingle, Nilesh P; Reineke, Theresa MBiomacromolecules2013 Nov 113903-1524028685
Tunable protein release from acetalated dextran microparticles: a platform for delivery of protein therapeutics to the heart post-MI.Suarez, Sophia; Grover, Gregory N; Braden, Rebecca L; Christman, Karen L; Almutairi, AdahBiomacromolecules2013 Nov 113927-3524053580
Application of time-resolved fluorescence for direct and continuous probing of release from polymeric delivery vehicles.Viger, Mathieu L; Sheng, Wangzhong; McFearin, Cathryn L; Berezin, Mikhail Y; Almutairi, AdahJournal of controlled release : official journal of the Controlled Release Society2013 Nov 10308-1423792808
Vascular endothelial growth factor-C enhances radiosensitivity of lymphatic endothelial cells.Kesler, Cristina T; Kuo, Angera H; Wong, Hon-Kit; Masuck, David J; Shah, Jennifer L; Kozak, Kevin R; Held, Kathryn D; Padera, Timothy PAngiogenesis2013 Nov 8NULL24201897
Albumin testing in urine using a smart-phone.Coskun, Ahmet F; Nagi, Richie; Sadeghi, Kayvon; Phillips, Stephen; Ozcan, AydoganLab on a chip2013 Nov 74231-823995895
Long-range chromatin contacts in embryonic stem cells reveal a role for pluripotency factors and polycomb proteins in genome organization.Denholtz, Matthew; Bonora, Giancarlo; Chronis, Constantinos; Splinter, Erik; de Laat, Wouter; Ernst, Jason; Pellegrini, Matteo; Plath, KathrinCell stem cell2013 Nov 7602-1624035354
Flexible shrink-induced high surface area electrodes for electrochemiluminescent sensing.Pegan, Jonathan D; Ho, Adrienne Y; Bachman, Mark; Khine, MichelleLab on a chip2013 Nov 74205-924056907
A zebrafish embryo culture system defines factors that promote vertebrate myogenesis across species.Xu, Cong; Tabebordbar, Mohammadsharif; Iovino, Salvatore; Ciarlo, Christie; Liu, Jingxia; Castiglioni, Alessandra; Price, Emily; Liu, Min; Barton, Elisabeth R; Kahn, C Ronald; Wagers, Amy J; Zon, Leonard ICell2013 Nov 7909-2124209627
New approaches for studying synaptic development, function, and plasticity using Drosophila as a model system.Frank, C Andrew; Wang, Xinnan; Collins, Catherine A; Rodal, Avital A; Yuan, Quan; Verstreken, Patrik; Dickman, Dion KThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Nov 617560-824198346
Spatiotemporal cellular imaging of polymer-pDNA nanocomplexes affords in situ morphology and trafficking trends.Ingle, Nilesh P; Xue, Lian; Reineke, Theresa MMolecular pharmaceutics2013 Nov 44120-3524007201
Expanding the Library and Substrate Diversity of the Pyrrolysyl-tRNA Synthetase to Incorporate Unnatural Amino Acids Containing Conjugated Rings.Lacey, Vanessa K; Louie, Gordon V; Noel, Joseph P; Wang, LeiChembiochem : a European journal of chemical biology2013 Nov 42100-524019075
Nanowatt threshold, alumina sensitized neodymium laser integrated on silicon.Maker, Ashley J; Armani, Andrea MOptics express2013 Nov 427238-4524216946
Topographical control of ocular cell types for tissue engineering.McHugh, Kevin J; Saint-Geniez, Magali; Tao, Sarah LJournal of biomedical materials research. Part B, Applied biomaterials2013 Nov1571-8423744715
Polar substitutions in helix 3 of the prion protein produce transmembrane isoforms that disturb vesicle trafficking.Sanchez-Garcia, Jonatan; Arbelaez, Daniela; Jensen, Kurt; Rincon-Limas, Diego E; Fernandez-Funez, PedroHuman molecular genetics2013 Nov 14253-6623771030
Stimulation of adipogenesis of adult adipose-derived stem cells using substrates that mimic the stiffness of adipose tissue.Young, D Adam; Choi, Yu Suk; Engler, Adam J; Christman, Karen LBiomaterials2013 Nov8581-823953825
Nutritional control of epigenetic processes in yeast and human cells.Sadhu, Meru J; Guan, Qiaoning; Li, Fei; Sales-Lee, Jade; Iavarone, Anthony T; Hammond, Ming C; Cande, W Zacheus; Rine, JasperGenetics2013 Nov831-4423979574
Superoxide-mediated protection of Escherichia coli from antimicrobials.Mosel, Michael; Li, Liping; Drlica, Karl; Zhao, XilinAntimicrobial agents and chemotherapy2013 Nov5755-923979754
Using variability in gene expression as a tool for studying gene regulation.Padovan-Merhar, Olivia; Raj, ArjunWiley interdisciplinary reviews. Systems biology and medicine2013 Nov-Dec751-923996796
Developmental timing of the effects of maternal care on gene expression and epigenetic regulation of hormone receptor levels in female rats.Pena, Catherine Jensen; Neugut, Y Dana; Champagne, Frances AEndocrinology2013 Nov4340-5124002038
Structural and functional characterization of the N terminus of Schizosaccharomyces pombe Cwf10.Livesay, S Brent; Collier, Scott E; Bitton, Danny A; Bahler, Jurg; Ohi, Melanie DEukaryotic cell2013 Nov1472-8924014766
Isolevuglandin-modified phosphatidylethanolamine is metabolized by NAPE-hydrolyzing phospholipase D.Guo, Lilu; Gragg, Stephen D; Chen, Zhongyi; Zhang, Yongqin; Amarnath, Venkataraman; Davies, Sean SJournal of lipid research2013 Nov3151-724018423
REDOR NMR for drug discovery.Cegelski, LynetteBioorganic & medicinal chemistry letters2013 Nov 15767-7524035486
Syllabic (ýýý2-5ýýHz) and fluctuation (ýýý1-10ýýHz) ranges in speech andýýauditory processing.Edwards, Erik; Chang, Edward FHearing research2013 Nov113-3424035819
Inhibitors of SCF-Skp2/Cks1 E3 ligase block estrogen-induced growth stimulation and degradation of nuclear p27kip1: therapeutic potential for endometrial cancer.Pavlides, Savvas C; Huang, Kuang-Tzu; Reid, Dylan A; Wu, Lily; Blank, Stephanie V; Mittal, Khushbakhat; Guo, Lankai; Rothenberg, Eli; Rueda, Bo; Cardozo, Timothy; Gold, Leslie IEndocrinology2013 Nov4030-4524035998
Circular permutation directs orthogonal assembly in complex collagen peptide mixtures.Xu, Fei; Silva, Teresita; Joshi, Mihir; Zahid, Sohail; Nanda, VikasThe Journal of biological chemistry2013 Nov 131616-2324043622
A co-culture device with a tunable stiffness to understand combinatorial cell-cell and cell-matrix interactions.Rao, Nikhil; Grover, Gregory N; Vincent, Ludovic G; Evans, Samantha C; Choi, Yu Suk; Spencer, Katrina H; Hui, Elliot E; Engler, Adam J; Christman, Karen LIntegrative biology : quantitative biosciences from nano to macro2013 Nov1344-5424061208
Dysregulation of Npas2 leads to altered metabolic pathways in a murine knockout model.O'Neil, Derek; Mendez-Figueroa, Hector; Mistretta, Toni-Ann; Su, Chunliu; Lane, Robert H; Aagaard, Kjersti MMolecular genetics and metabolism2013 Nov378-8724067359
Developmental disorders of the dentition: an update.Klein, Ophir D; Oberoi, Snehlata; Huysseune, Ann; Hovorakova, Maria; Peterka, Miroslav; Peterkova, RenataAmerican journal of medical genetics. Part C, Seminars in medical genetics2013 Nov318-3224124058
Rapid identification of kidney cyst mutations by whole exome sequencing in zebrafish.Ryan, Sean; Willer, Jason; Marjoram, Lindsay; Bagwell, Jennifer; Mankiewicz, Jamie; Leshchiner, Ignaty; Goessling, Wolfram; Bagnat, Michel; Katsanis, NicholasDevelopment (Cambridge, England)2013 Nov4445-5124130329
Mosaic copy number variation in human neurons.McConnell, Michael J; Lindberg, Michael R; Brennand, Kristen J; Piper, Julia C; Voet, Thierry; Cowing-Zitron, Chris; Shumilina, Svetlana; Lasken, Roger S; Vermeesch, Joris R; Hall, Ira M; Gage, Fred HScience (New York, N.Y.)2013 Nov 1632-724179226
New vectors for epitope tagging and gene disruption in Schizosaccharomyces pombe.Gadaleta, Mariana C; Iwasaki, Osamu; Noguchi, Chiaki; Noma, Ken-ichi; Noguchi, EishiBioTechniques2013 Nov257-6324215641
Mass spectrometry imaging as a tool for surgical decision-making.Calligaris, David; Norton, Isaiah; Feldman, Daniel R; Ide, Jennifer L; Dunn, Ian F; Eberlin, Livia S; Cooks, R Graham; Jolesz, Ferenc A; Golby, Alexandra J; Santagata, Sandro; Agar, Nathalie YJournal of mass spectrometry : JMS2013 Nov1178-8724259206
Computer-aided detection and quantification of cavitary tuberculosis from CT scans.Xu, Ziyue; Bagci, Ulas; Kubler, Andre; Luna, Brian; Jain, Sanjay; Bishai, William R; Mollura, Daniel JMedical physics2013 Nov11370124320475
Translational profiling of clock cells reveals circadianly synchronized protein synthesis.Huang, Yanmei; Ainsley, Joshua A; Reijmers, Leon G; Jackson, F RobPLoS biology2013 Nove100170324348200
Human systems immunology: hypothesis-based modeling and unbiased data-driven approaches.Arazi, Arnon; Pendergraft 3rd, William F; Ribeiro, Ruy M; Perelson, Alan S; Hacohen, NirSeminars in immunology2013 Oct 31193-20023375135
The use of contact heat evoked potential stimulator (CHEPS) in magnetoencephalography for pain research.Gopalakrishnan, Raghavan; Machado, Andre G; Burgess, Richard C; Mosher, John CJournal of neuroscience methods2013 Oct 3055-6323994044
Wild-type neural progenitors divide and differentiate normally in an amyloid-rich environment.Yetman, Michael J; Jankowsky, Joanna LThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Oct 3017335-4124174666
What is a representative brain? Neuroscience meets population science.Falk, Emily B; Hyde, Luke W; Mitchell, Colter; Faul, Jessica; Gonzalez, Richard; Heitzeg, Mary M; Keating, Daniel P; Langa, Kenneth M; Martz, Meghan E; Maslowsky, Julie; Morrison, Frederick J; Noll, Douglas C; Patrick, Megan E; Pfeffer, Fabian T; Reuter-LProceedings of the National Academy of Sciences of the United States of America2013 Oct 2917615-2224151336
A network of interactions enables CCM3 and STK24 to coordinate UNC13D-driven vesicle exocytosis in neutrophils.Zhang, Yong; Tang, Wenwen; Zhang, Haifeng; Niu, Xiaofeng; Xu, Yingke; Zhang, Jiasheng; Gao, Kun; Pan, Weijun; Boggon, Titus J; Toomre, Derek; Min, Wang; Wu, DianqingDevelopmental cell2013 Oct 28215-2624176643
Gle1 functions during mRNA export in an oligomeric complex that is altered in human disease.Folkmann, Andrew W; Collier, Scott E; Zhan, Xiaoyan; Aditi; Ohi, Melanie D; Wente, Susan RCell2013 Oct 24582-9324243016
Diet alters species recognition in juvenile toads.Pfennig, Karin S; Moncalvo, Veronica G Rodriguez; Burmeister, Sabrina SBiology letters2013 Oct 232013059924088562
Evaluating noncoding nucleotide repeat expansions in amyotrophic lateral sclerosis.Figley, Matthew D; Thomas, Anna; Gitler, Aaron DNeurobiology of aging2013 Oct 23NULL24269018
Fluorescent imaging of single nanoparticles and viruses on a smart phone.Wei, Qingshan; Qi, Hangfei; Luo, Wei; Tseng, Derek; Ki, So Jung; Wan, Zhe; Gorocs, Zoltan; Bentolila, Laurent A; Wu, Ting-Ting; Sun, Ren; Ozcan, AydoganACS nano2013 Oct 229147-5524016065
Modulation of macrophage phenotype by cell shape.McWhorter, Frances Y; Wang, Tingting; Nguyen, Phoebe; Chung, Thanh; Liu, Wendy FProceedings of the National Academy of Sciences of the United States of America2013 Oct 2217253-824101477
Smart-phone based computational microscopy using multi-frame contact imaging on a fiber-optic array.Navruz, Isa; Coskun, Ahmet F; Wong, Justin; Mohammad, Saqib; Tseng, Derek; Nagi, Richie; Phillips, Stephen; Ozcan, AydoganLab on a chip2013 Oct 214015-2323939637
Microfluidic opportunities in the field of nutrition.Li, Sixing; Kiehne, Justin; Sinoway, Lawrence I; Cameron, Craig E; Huang, Tony JunLab on a chip2013 Oct 213993-400324056522
Selective Delivery of an Anticancer Drug with Aptamer-Functionalized Liposomes to Breast Cancer Cells in Vitro and in Vivo.Xing, Hang; Tang, Li; Yang, Xujuan; Hwang, Kevin; Wang, Wendan; Yin, Qian; Wong, Ngo Yin; Dobrucki, Lawrence W; Yasui, Norio; Katzenellenbogen, John A; Helferich, William G; Cheng, Jianjun; Lu, YiJournal of materials chemistry. B, Materials for biology and medicine2013 Oct 215288-529724159374
Lessons learned from the transformation of natural product discovery to a genome-driven endeavor.Deane, Caitlin D; Mitchell, Douglas AJournal of industrial microbiology & biotechnology2013 Oct 19NULL24142337
Tunable and multifunctional eukaryotic transcription factors based on CRISPR/Cas.Farzadfard, Fahim; Perli, Samuel D; Lu, Timothy KACS synthetic biology2013 Oct 18604-1323977949
Multivariate Pattern Analysis of fMRI in Breast Cancer Survivors and Healthy Women.Hosseini, S M Hadi; Kesler, Shelli RJournal of the International Neuropsychological Society : JINS2013 Oct 184165024135221
A pharmacological network for lifespan extension in Caenorhabditis elegans.Ye, Xiaolan; Linton, James M; Schork, Nicholas J; Buck, Linda B; Petrascheck, MichaelAging cell2013 Oct 17NULL24134630
Poly(trehalose): sugar-coated nanocomplexes promote stabilization and effective polyplex-mediated siRNA delivery.Sizovs, Antons; Xue, Lian; Tolstyka, Zachary P; Ingle, Nilesh P; Wu, Yaoying; Cortez, Mallory; Reineke, Theresa MJournal of the American Chemical Society2013 Oct 1615417-2424083547
In vivo expression of a light-activatable potassium channel using unnatural amino acids.Kang, Ji-Yong; Kawaguchi, Daichi; Coin, Irene; Xiang, Zheng; O'Leary, Dennis D M; Slesinger, Paul A; Wang, LeiNeuron2013 Oct 16358-7024139041
Defining efficient enzyme-cofactor pairs for bioorthogonal profiling of protein methylation.Islam, Kabirul; Chen, Yuling; Wu, Hong; Bothwell, Ian R; Blum, Gil J; Zeng, Hong; Dong, Aiping; Zheng, Weihong; Min, Jinrong; Deng, Haiteng; Luo, MinkuiProceedings of the National Academy of Sciences of the United States of America2013 Oct 1516778-8324082136
Merging chemical ecology with bacterial genome mining for secondary metabolite discovery.Vizcaino, Maria I; Guo, Xun; Crawford, Jason MJournal of industrial microbiology & biotechnology2013 Oct 15NULL24127069
Epithelial-mesenchymal plasticity in carcinoma metastasis.Tsai, Jeff H; Yang, JingGenes & development2013 Oct 152192-20624142872
Advancing polymeric delivery systems amidst a nucleic acid therapy renaissance.Burke, Paul A; Pun, Suzie H; Reineke, Theresa MACS macro letters2013 Oct 15928-93424683504
Redox-responsive, core-cross-linked micelles capable of on-demand, concurrent drug release and structure disassembly.Wang, Hua; Tang, Li; Tu, Chunlai; Song, Ziyuan; Yin, Qian; Yin, Lichen; Zhang, Zhonghai; Cheng, JianjunBiomacromolecules2013 Oct 143706-1224003893
New tides: using zebrafish to study renal regeneration.McCampbell, Kristen K; Wingert, Rebecca ATranslational research : the journal of laboratory and clinical medicine2013 Oct 14NULL24183931
The epithelial cell-derived atopic dermatitis cytokine TSLP activates neurons to induce itch.Wilson, Sarah R; The, Lydia; Batia, Lyn M; Beattie, Katherine; Katibah, George E; McClain, Shannan P; Pellegrino, Maurizio; Estandian, Daniel M; Bautista, Diana MCell2013 Oct 10285-9524094650
Co-opting the unfolded protein response to elicit olfactory receptor feedback.Dalton, Ryan P; Lyons, David B; Lomvardas, StavrosCell2013 Oct 10321-3224120133
An acoustofluidic micromixer based on oscillating sidewall sharp-edges.Huang, Po-Hsun; Xie, Yuliang; Ahmed, Daniel; Rufo, Joseph; Nama, Nitesh; Chen, Yuchao; Chan, Chung Yu; Huang, Tony JunLab on a chip2013 Oct 73847-5223896797
Synthesis of plantazolicin analogues enables dissection of ligand binding interactions of a highly selective methyltransferase.Sharma, Abhishek; Blair, Patricia M; Mitchell, Douglas AOrganic letters2013 Oct 45076-924063702
Stem cell factor expression in B cell malignancies is influenced by the niche.Fox, Matthew F; Pontier, Andrea; Gurbuxani, Sandeep; Sipkins, Dorothy ALeukemia & lymphoma2013 Oct2274-8023418895
Convergent functional genomics of psychiatric disorders.Niculescu, Alexander BAmerican journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics2013 Oct587-9423728881
Characterization of a large human transgene following invasin-mediated delivery in a bacterial artificial chromosome.Gillen, Austin E; Lucas, Catherine A; Haussecker, Pei Ling; Kosak, Steven T; Harris, AnnChromosoma2013 Oct351-6123749207
Microfluidic multiplexing in bioanalyses.Araz, M Kursad; Tentori, Augusto M; Herr, Amy EJournal of laboratory automation2013 Oct350-6623757343
The adaptive variant EDARV370A is associated with straight hair in East Asians.Tan, Jingze; Yang, Yajun; Tang, Kun; Sabeti, Pardis C; Jin, Li; Wang, SijiaHuman genetics2013 Oct1187-9123793515
Biomolecular analysis with microring resonators: applications in multiplexed diagnostics and interaction screening.Kindt, Jared T; Bailey, Ryan CCurrent opinion in chemical biology2013 Oct818-2623871688
RNA-guided gene activation by CRISPR-Cas9-based transcription factors.Perez-Pinera, Pablo; Kocak, D Dewran; Vockley, Christopher M; Adler, Andrew F; Kabadi, Ami M; Polstein, Lauren R; Thakore, Pratiksha I; Glass, Katherine A; Ousterout, David G; Leong, Kam W; Guilak, Farshid; Crawford, Gregory E; Reddy, Timothy E; Gersbach,Nature methods2013 Oct973-623892895
Cell-autonomous regulation of brown fat identity gene UCP1 by unliganded vitamin D receptor.Malloy, Peter J; Feldman, Brian JMolecular endocrinology (Baltimore, Md.)2013 Oct1632-4223906633
H4K20 methylation regulates quiescence and chromatin compaction.Evertts, Adam G; Manning, Amity L; Wang, Xin; Dyson, Nicholas J; Garcia, Benjamin A; Coller, Hilary AMolecular biology of the cell2013 Oct3025-3723924899
Diverse functions for six glycosyltransferases in Caulobacter crescentus cell wall assembly.Yakhnina, Anastasiya A; Gitai, ZemerJournal of bacteriology2013 Oct4527-3523935048
A nuclear F-actin scaffold stabilizes ribonucleoprotein droplets against gravity in large cells.Feric, Marina; Brangwynne, Clifford PNature cell biology2013 Oct1253-923995731
Long-gradient separations coupled with selected reaction monitoring for highly sensitive, large scale targeted protein quantification in a single analysis.Shi, Tujin; Fillmore, Thomas L; Gao, Yuqian; Zhao, Rui; He, Jintang; Schepmoes, Athena A; Nicora, Carrie D; Wu, Chaochao; Chambers, Justin L; Moore, Ronald J; Kagan, Jacob; Srivastava, Sudhir; Liu, Alvin Y; Rodland, Karin D; Liu, Tao; Camp 2nd, David G; SAnalytical chemistry2013 Oct 19196-20324004026
Burst suppression probability algorithms: state-space methods for tracking EEG burst suppression.Chemali, Jessica; Ching, ShiNung; Purdon, Patrick L; Solt, Ken; Brown, Emery NJournal of neural engineering2013 Oct5601724018288
Natural cardiogenesis-based template predicts cardiogenic potential of induced pluripotent stem cell lines.Martinez-Fernandez, Almudena; Li, Xing; Hartjes, Katherine A; Terzic, Andre; Nelson, Timothy JCirculation. Cardiovascular genetics2013 Oct462-7124036272
Counting molecules in single organelles with superresolution microscopy allows tracking of the endosome maturation trajectory.Puchner, Elias M; Walter, Jessica M; Kasper, Robert; Huang, Bo; Lim, Wendell AProceedings of the National Academy of Sciences of the United States of America2013 Oct 116015-2024043832
In vivo reprogramming of astrocytes to neuroblasts in the adult brain.Niu, Wenze; Zang, Tong; Zou, Yuhua; Fang, Sanhua; Smith, Derek K; Bachoo, Robert; Zhang, Chun-LiNature cell biology2013 Oct1164-7524056302
Sensitive capture of circulating tumour cells by functionalized graphene oxide nanosheets.Yoon, Hyeun Joong; Kim, Tae Hyun; Zhang, Zhuo; Azizi, Ebrahim; Pham, Trinh M; Paoletti, Costanza; Lin, Jules; Ramnath, Nithya; Wicha, Max S; Hayes, Daniel F; Simeone, Diane M; Nagrath, SunithaNature nanotechnology2013 Oct735-4124077027
Brown and beige fat: development, function and therapeutic potential.Harms, Matthew; Seale, PatrickNature medicine2013 Oct1252-6324100998
Spontaneous cardiomyocyte differentiation of mouse embryoid bodies regulated by hydrogel crosslink density.Chung, Cindy; Pruitt, Beth L; Heilshorn, Sarah CBiomaterials science2013 Oct 11082-109024748962
A Universal Electrode Approach for Automated Electrochemical Molecular Analyses.Sin, Mandy L Y; Gau, Vincent; Liao, Joseph C; Wong, P KJournal of microelectromechanical systems : a joint IEEE and ASME publication on microstructures, microactuators, microsensors, and microsystems2013 Oct1126-113224860248
Real-time segmentation of burst suppression patterns in critical care EEG monitoring.Brandon Westover, M; Shafi, Mouhsin M; Ching, Shinung; Chemali, Jessica J; Purdon, Patrick L; Cash, Sydney S; Brown, Emery NJournal of neuroscience methods2013 Sep 30131-4123891828
Invading one step at a time: the role of invadopodia in tumor metastasis.Paz, H; Pathak, N; Yang, JOncogene2013 Sep 30NULL24077283
A Ruler Protein in a Complex for Antiviral Defense Determines the Length of Small Interfering CRISPR RNAs.Hatoum-Aslan, Asma; Samai, Poulami; Maniv, Inbal; Jiang, Wenyan; Marraffini, Luciano AThe Journal of biological chemistry2013 Sep 2727888-9723935102
Optical detection and sizing of single nanoparticles using continuous wetting films.Hennequin, Yves; Allier, Cedric P; McLeod, Euan; Mudanyali, Onur; Migliozzi, Daniel; Ozcan, Aydogan; Dinten, Jean-MarcACS nano2013 Sep 247601-923889001
Surface acoustic wave microfluidics.Ding, Xiaoyun; Li, Peng; Lin, Sz-Chin Steven; Stratton, Zackary S; Nama, Nitesh; Guo, Feng; Slotcavage, Daniel; Mao, Xiaole; Shi, Jinjie; Costanzo, Francesco; Huang, Tony JunLab on a chip2013 Sep 213626-4923900527
Reduction of human defensin 5 affords a high-affinity zinc-chelating peptide.Zhang, Yunfei; Cougnon, Fabien B L; Wanniarachchi, Yoshitha A; Hayden, Joshua A; Nolan, Elizabeth MACS chemical biology2013 Sep 201907-1123841778
Rescuing Auxotrophic Microorganisms with Nonenzymatic Chemistry.Lee, Yunmi; Umeano, Afoma; Balskus, Emily PAngewandte Chemie (International ed. in English)2013 Sep 20NULL24115592
The HIPAA conundrum in the era of mobile health and communications.Wang, C Jason; Huang, Delphine JJAMA : the journal of the American Medical Association2013 Sep 181121-223978879
Poly(iohexol) nanoparticles as contrast agents for in vivo X-ray computed tomography imaging.Yin, Qian; Yap, Felix Y; Yin, Lichen; Ma, Liang; Zhou, Qin; Dobrucki, Lawrence W; Fan, Timothy M; Gaba, Ron C; Cheng, JianjunJournal of the American Chemical Society2013 Sep 1813620-323987119
All signals lost.Wilke, Kaelyn E; Carlson, Erin EScience translational medicine2013 Sep 18203ps1224048521
A Subspace Pursuit-based Iterative Greedy Hierarchical solution to the neuromagnetic inverse problem.Babadi, Behtash; Obregon-Henao, Gabriel; Lamus, Camilo; Hamalainen, Matti S; Brown, Emery N; Purdon, Patrick LNeuroImage2013 Sep 18NULL24055554
PEG-Polypeptide Dual Brush Block Copolymers: Synthesis and Application in Nanoparticle Surface PEGylation.Zhang, Yanfeng; Yin, Qian; Lu, Hua; Xia, Hongwei; Lin, Yao; Cheng, JianjunACS macro letters2013 Sep 17809-81324159425
Overhauser Dynamic Nuclear Polarization-Enhanced NMR Relaxometry.Franck, John M; Kausik, Ravinath; Han, SongiMicroporous and mesoporous materials : the official journal of the International Zeolite Association2013 Sep 15113-11823837010
A template for new drugs against Alzheimer's disease.Aguzzi, Adriano; Gitler, Aaron DCell2013 Sep 121182-424034239
Bacterial argonaute samples the transcriptome to identify foreign DNA.Olovnikov, Ivan; Chan, Ken; Sachidanandam, Ravi; Newman, Dianne K; Aravin, Alexei AMolecular cell2013 Sep 12594-60524034694
A journey toward Bioorthogonal Profiling of Protein Methylation inside living cells.Wang, Rui; Luo, MinkuiCurrent opinion in chemical biology2013 Sep 12NULL24035694
Structure-activity studies of divin: an inhibitor of bacterial cell division.Zhou, Maoquan; Eun, Ye-Jin; Guzei, Ilia A; Weibel, Douglas BACS medicinal chemistry letters2013 Sep 12880-88524044050
Molecular tension sensors report forces generated by single integrin molecules in living cells.Morimatsu, Masatoshi; Mekhdjian, Armen H; Adhikari, Arjun S; Dunn, Alexander RNano letters2013 Sep 113985-923859772
H3R42me2a is a histone modification with positive transcriptional effects.Casadio, Fabio; Lu, Xiangdong; Pollock, Samuel B; LeRoy, Gary; Garcia, Benjamin A; Muir, Tom W; Roeder, Robert G; Allis, C DavidProceedings of the National Academy of Sciences of the United States of America2013 Sep 1014894-923980157
Stealth polymeric vesicles via metal-free click coupling.Isaacman, Michael J; Corigliano, Eleonora M; Theogarajan, Luke SBiomacromolecules2013 Sep 92996-300023952743
DNA-directed self-assembly of shape-controlled hydrogels.Qi, Hao; Ghodousi, Majid; Du, Yanan; Grun, Casey; Bae, Hojae; Yin, Peng; Khademhosseini, AliNature communications2013 Sep 9227524013352
Detection of mRNA in living cells by double-stranded locked nucleic acid probes.Riahi, Reza; Dean, Zachary; Wu, Ting-Hsiang; Teitell, Michael A; Chiou, Pei-Yu; Zhang, Donna D; Wong, Pak KinThe Analyst2013 Sep 74777-8523772441
Expanding the fluorine chemistry of living systems using engineered polyketide synthase pathways.Walker, Mark C; Thuronyi, Benjamin W; Charkoudian, Louise K; Lowry, Brian; Khosla, Chaitan; Chang, Michelle C YScience (New York, N.Y.)2013 Sep 61089-9424009388
Identifying multiple causative genes at a single GWAS locus.Flister, Michael J; Tsaih, Shirng-Wern; O'Meara, Caitlin C; Endres, Bradley; Hoffman, Matthew J; Geurts, Aron M; Dwinell, Melinda R; Lazar, Jozef; Jacob, Howard J; Moreno, CarolGenome research2013 Sep 4NULL24006081
Alteration of genic 5-hydroxymethylcytosine patterning in olfactory neurons correlates with changes in gene expression and cell identity.Colquitt, Bradley M; Allen, William E; Barnea, Gilad; Lomvardas, StavrosProceedings of the National Academy of Sciences of the United States of America2013 Sep 314682-723969834
Longitudinal, quantitative monitoring of therapeutic response in 3D in vitro tumor models with OCT for high-content therapeutic screening.Klein, O J; Jung, Y K; Evans, C LMethods (San Diego, Calif.)2013 Sep 3NULL24013042
Hibernating squirrel muscle activates the endurance exercise pathway despite prolonged immobilization.Xu, Ran; Andres-Mateos, Eva; Mejias, Rebeca; MacDonald, Elizabeth M; Leinwand, Leslie A; Merriman, Dana K; Fink, Rainer H A; Cohn, Ronald DExperimental neurology2013 Sep392-40123333568
Comparing connectivity pattern and small-world organization between structural correlation and resting-state networks in healthy adults.Hosseini, S M Hadi; Kesler, Shelli RNeuroImage2013 Sep402-1423603348
Novel mTOR inhibitory activity of ciclopirox enhances parthenolide antileukemia activity.Sen, Siddhartha; Hassane, Duane C; Corbett, Cheryl; Becker, Michael W; Jordan, Craig T; Guzman, Monica LExperimental hematology2013 Sep799-807.e423660068
Tungsten disulfide nanotubes reinforced biodegradable polymers for bone tissue engineering.Lalwani, Gaurav; Henslee, Allan M; Farshid, Behzad; Parmar, Priyanka; Lin, Liangjun; Qin, Yi-Xian; Kasper, F Kurtis; Mikos, Antonios G; Sitharaman, BalajiActa biomaterialia2013 Sep8365-7323727293
Reading frame correction by targeted genome editing restores dystrophin expression in cells from Duchenne muscular dystrophy patients.Ousterout, David G; Perez-Pinera, Pablo; Thakore, Pratiksha I; Kabadi, Ami M; Brown, Matthew T; Qin, Xiaoxia; Fedrigo, Olivier; Mouly, Vincent; Tremblay, Jacques P; Gersbach, Charles AMolecular therapy : the journal of the American Society of Gene Therapy2013 Sep1718-2623732986
Astroglial cells regulate the developmental timeline of human neurons differentiated from induced pluripotent stem cells.Tang, Xin; Zhou, Li; Wagner, Alecia M; Marchetto, Maria C N; Muotri, Alysson R; Gage, Fred H; Chen, GongStem cell research2013 Sep743-5723759711
Mutations in Hedgehog pathway genes in fetal rhabdomyomas.Hettmer, Simone; Teot, Lisa A; van Hummelen, Paul; MacConaill, Laura; Bronson, Roderick T; Dall'Osso, Claudia; Mao, Junhao; McMahon, Andrew P; Gruber, Peter J; Grier, Holcombe E; Rodriguez-Galindo, Carlos; Fletcher, Christopher D; Wagers, Amy JThe Journal of pathology2013 Sep44-5223780909
Perfusion-decellularized pancreas as a natural 3D scaffold for pancreatic tissue and whole organ engineering.Goh, Saik-Kia; Bertera, Suzanne; Olsen, Phillip; Candiello, Joseph E; Halfter, Willi; Uechi, Guy; Balasubramani, Manimalha; Johnson, Scott A; Sicari, Brian M; Kollar, Elizabeth; Badylak, Stephen F; Banerjee, IpsitaBiomaterials2013 Sep6760-7223787110
Interactions between B lymphocytes and the osteoblast lineage in bone marrow.Panaroni, Cristina; Wu, Joy YCalcified tissue international2013 Sep261-823839529
Local cortical dynamics of burst suppression in the anaesthetized brain.Lewis, Laura D; Ching, Shinung; Weiner, Veronica S; Peterfreund, Robert A; Eskandar, Emad N; Cash, Sydney S; Brown, Emery N; Purdon, Patrick LBrain : a journal of neurology2013 Sep2727-3723887187
Histone variant H3.3 maintains a decondensed chromatin state essential for mouse preimplantation development.Lin, Chih-Jen; Conti, Marco; Ramalho-Santos, MiguelDevelopment (Cambridge, England)2013 Sep3624-3423903189
Adding an unnatural covalent bond to proteins through proximity-enhanced bioreactivity.Xiang, Zheng; Ren, Haiyan; Hu, Ying S; Coin, Irene; Wei, Jing; Cang, Hu; Wang, LeiNature methods2013 Sep885-823913257
Visualizing SNVs to quantify allele-specific expression in single cells.Levesque, Marshall J; Ginart, Paul; Wei, Yichen; Raj, ArjunNature methods2013 Sep865-723913259
A Biochip with a 3D microfluidic architecture for trapping white blood cells.Tripathi, Anurag; Riddell 4th, James; Chronis, NikosSensors and actuators. B, Chemical2013 Sep 1244-25123935241
Analysis of the proteolysis of bioactive peptides using a peptidomics approach.Kim, Yun-Gon; Lone, Anna Mari; Saghatelian, AlanNature protocols2013 Sep1730-4223949379
National variation in costs and mortality for leukodystrophy patients in US children's hospitals.Brimley, Cameron J; Lopez, Jonathan; van Haren, Keith; Wilkes, Jacob; Sheng, Xiaoming; Nelson, Clint; Korgenski, E Kent; Srivastava, Rajendu; Bonkowsky, Joshua LPediatric neurology2013 Sep156-162.e123953952
Cellular Binding of Anionic Nanoparticles is Inhibited by Serum Proteins Independent of Nanoparticle Composition.Fleischer, Candace C; Kumar, Umesh; Payne, Christine KBiomaterials science2013 Sep 1975-98223956836
Kidney organogenesis in the zebrafish: insights into vertebrate nephrogenesis and regeneration.Gerlach, Gary F; Wingert, Rebecca AWiley interdisciplinary reviews. Developmental biology2013 Sep559-8524014448
Lymphatic function and immune regulation in health and disease.Liao, Shan; Padera, Timothy PLymphatic research and biology2013 Sep136-4324024577
Hsp104 suppresses polyglutamine-induced degeneration post onset in a drosophila MJD/SCA3 model.Cushman-Nick, Mimi; Bonini, Nancy M; Shorter, JamesPLoS genetics2013 Sepe100378124039611
Congenital and Acute Kidney Disease: Translational Research Insights from Zebrafish Chemical Genetics.Poureetezadi, Shahram Jevin; Wingert, Rebecca AGeneral medicine (Los Angeles, Calif.)2013 Sep 111224653992
Convergent evolution of hyperswarming leads to impaired biofilm formation in pathogenic bacteria.van Ditmarsch, Dave; Boyle, Kerry E; Sakhtah, Hassan; Oyler, Jennifer E; Nadell, Carey D; Deziel, Eric; Dietrich, Lars E P; Xavier, Joao BCell reports2013 Aug 29697-70823954787
Light-responsive helical polypeptides capable of reducing toxicity and unpacking DNA: toward nonviral gene delivery.Yin, Lichen; Tang, Haoyu; Kim, Kyung Hoon; Zheng, Nan; Song, Ziyuan; Gabrielson, Nathan P; Lu, Hua; Cheng, JianjunAngewandte Chemie (International ed. in English)2013 Aug 269182-623832670
Molecular simulations of aromatase reveal new insights into the mechanism of ligand binding.Park, Jiho; Czapla, Luke; Amaro, Rommie EJournal of chemical information and modeling2013 Aug 262047-5623927370
4Pi fluorescence detection and 3D particle localization with a single objective.Schnitzbauer, J; McGorty, R; Huang, BOptics express2013 Aug 2619701-824105517
Probing cell-cell communication with microfluidic devices.Guo, Feng; French, Jarrod B; Li, Peng; Zhao, Hong; Chan, Chung Yu; Fick, James R; Benkovic, Stephen J; Huang, Tony JunLab on a chip2013 Aug 213152-6223843092
Effects of vascular-endothelial protein tyrosine phosphatase inhibition on breast cancer vasculature and metastatic progression.Goel, Shom; Gupta, Nisha; Walcott, Brian P; Snuderl, Matija; Kesler, Cristina T; Kirkpatrick, Nathaniel D; Heishi, Takahiro; Huang, Yuhui; Martin, John D; Ager, Eleanor; Samuel, Rekha; Wang, Shuhan; Yazbek, John; Vakoc, Benjamin J; Peterson, Randall T; PaJournal of the National Cancer Institute2013 Aug 211188-20123899555
Disruptive by design: a perspective on engineering in analytical chemistry.Herr, Amy EAnalytical chemistry2013 Aug 207622-823924345
Highest Efficiency Two-Photon Degradable Copolymer for Remote Controlled Release.Olejniczak, Jason; Sankaranarayanan, Jagadis; Viger, Mathieu L; Almutairi, AdahACS macro letters2013 Aug 20683-68724044102
Bacterial growth and adaptation in microdroplet chemostats.Jakiela, Slawomir; Kaminski, Tomasz S; Cybulski, Olgierd; Weibel, Douglas B; Garstecki, PiotrAngewandte Chemie (International ed. in English)2013 Aug 198908-1123832572
Initial characterization of histone H3 serine 10 O-acetylation.Britton, Laura-Mae P; Newhart, Alyshia; Bhanu, Natarajan V; Sridharan, Rupa; Gonzales-Cope, Michelle; Plath, Kathrin; Janicki, Susan M; Garcia, Benjamin AEpigenetics : official journal of the DNA Methylation Society2013 Aug 15NULL23949383
E3-ubiquitin ligase Nedd4 determines the fate of AID-associated RNA polymerase II in B cells.Sun, Jianbo; Keim, Celia D; Wang, Jiguang; Kazadi, David; Oliver, Paula M; Rabadan, Raul; Basu, UttiyaGenes & development2013 Aug 151821-3323964096
Dye-sensitized solar cell with energy storage function through PVDF/ZnO nanocomposite counter electrode.Zhang, Xi; Huang, Xuezhen; Li, Chensha; Jiang, HongruiAdvanced materials (Deerfield Beach, Fla.)2013 Aug 144093-623740719
Liquid Tunable Microlenses based on MEMS techniques.Zeng, Xuefeng; Jiang, HongruiJournal of physics D: Applied physics2013 Aug 1432300124163480
Steric effects in peptide and protein exchange with activated disulfides.Kerr, Jason; Schlosser, Jessica L; Griffin, Donald R; Wong, Darice Y; Kasko, Andrea MBiomacromolecules2013 Aug 122822-923865598
The Local Dinucleotide Preference of APOBEC3G Can Be Altered from 5'-CC to 5'-TC by a Single Amino Acid Substitution.Rathore, Anurag; Carpenter, Michael A; Demir, Ozlem; Ikeda, Terumasa; Li, Ming; Shaban, Nadine M; Law, Emily K; Anokhin, Dmitry; Brown, William L; Amaro, Rommie E; Harris, Reuben SJournal of molecular biology2013 Aug 11NULL23938202
Processive ATP-driven substrate disassembly by the N-ethylmaleimide-sensitive factor (NSF) molecular machine.Cipriano, Daniel J; Jung, Jaemyeong; Vivona, Sandro; Fenn, Timothy D; Brunger, Axel T; Bryant, ZevThe Journal of biological chemistry2013 Aug 923436-4523775070
Vitamin C induces Tet-dependent DNA demethylation and a blastocyst-like state in ES cells.Blaschke, Kathryn; Ebata, Kevin T; Karimi, Mohammad M; Zepeda-Martinez, Jorge A; Goyal, Preeti; Mahapatra, Sahasransu; Tam, Angela; Laird, Diana J; Hirst, Martin; Rao, Anjana; Lorincz, Matthew C; Ramalho-Santos, MiguelNature2013 Aug 8222-623812591
Structural and functional insight into an unexpectedly selective N-methyltransferase involved in plantazolicin biosynthesis.Lee, Jaeheon; Hao, Yue; Blair, Patricia M; Melby, Joel O; Agarwal, Vinayak; Burkhart, Brandon J; Nair, Satish K; Mitchell, Douglas AProceedings of the National Academy of Sciences of the United States of America2013 Aug 612954-923878226
Holographically formed, acoustically switchable gratings based on polymer-dispersed liquid crystals.Liu, Yan Jun; Lu, Mengqian; Ding, Xiaoyun; Leong, Eunice S P; Lin, Sz-Chin Steven; Shi, Jinjie; Teng, Jing Hua; Wang, Lin; Bunning, Timothy J; Huang, Tony JunJournal of laboratory automation2013 Aug291-522909448
Condylomatous genital lesions in cynomolgus macaques from Mauritius.Harari, Ariana; Wood, Charles E; Van Doorslaer, Koenraad; Chen, Zigui; Domaingue, Marie Claire; Elmore, David; Koenig, Patricia; Wagner, Janice D; Jennings, Ryan N; Burk, Robert DToxicologic pathology2013 Aug893-90123262641
Dynamic and reversible surface topography influences cell morphology.Kiang, Jennifer D; Wen, Jessica H; del Alamo, Juan C; Engler, Adam JJournal of biomedical materials research. Part A2013 Aug2313-2123355509
Microfluidics and cancer: are we there yet?Zhang, Zhuo; Nagrath, SunithaBiomedical microdevices2013 Aug595-60923358873
Bio-origami hydrogel scaffolds composed of photocrosslinked PEG bilayers.Jamal, Mustapha; Kadam, Sachin S; Xiao, Rui; Jivan, Faraz; Onn, Tzia-Ming; Fernandes, Rohan; Nguyen, Thao D; Gracias, David HAdvanced healthcare materials2013 Aug1142-5023386382
Trauma-associated human neutrophil alterations revealed by comparative proteomics profiling.Zhou, Jian-Ying; Krovvidi, Ravi K; Gao, Yuqian; Gao, Hong; Petritis, Brianne O; De, Asit K; Miller-Graziano, Carol L; Bankey, Paul E; Petyuk, Vladislav A; Nicora, Carrie D; Clauss, Therese R; Moore, Ronald J; Shi, Tujin; Brown, Joseph N; Kaushal, Amit; XiProteomics. Clinical applications2013 Aug571-8323589343
Towards a predictive systems-level model of the human microbiome: progress, challenges, and opportunities.Greenblum, Sharon; Chiu, Hsuan-Chao; Levy, Roie; Carr, Rogan; Borenstein, ElhananCurrent opinion in biotechnology2013 Aug810-2023623295
Social signals increase monoamine levels in the tegmentum of juvenile Mexican spadefoot toads (Spea multiplicata).Rodriguez Moncalvo, Veronica G; Moncalvo, Veronica G; Burmeister, Sabrina S; Pfennig, Karin SJournal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology2013 Aug681-9123681220
C-RAF Mutations Confer Resistance to RAF Inhibitors.Antony, Rajee; Emery, Caroline M; Sawyer, Allison M; Garraway, Levi ACancer research2013 Aug 14840-5123737487
Programmable repression and activation of bacterial gene expression using an engineered CRISPR-Cas system.Bikard, David; Jiang, Wenyan; Samai, Poulami; Hochschild, Ann; Zhang, Feng; Marraffini, Luciano ANucleic acids research2013 Aug7429-3723761437
The aging brain and anesthesia.Brown, Emery N; Purdon, Patrick LCurrent opinion in anaesthesiology2013 Aug414-923820102
Transforming potential and matrix stiffness co-regulate confinement sensitivity of tumor cell migration.Pathak, Amit; Kumar, SanjayIntegrative biology : quantitative biosciences from nano to macro2013 Aug1067-7523832051
Complex chemoattractive and chemorepellent Kit signals revealed by direct imaging of murine mast cells in microfluidic gradient chambers.Shamloo, Amir; Manchandia, Milan; Ferreira, Meghaan; Mani, Maheswaran; Nguyen, Christopher; Jahn, Thomas; Weinberg, Kenneth; Heilshorn, SarahIntegrative biology : quantitative biosciences from nano to macro2013 Aug1076-8523835699
TB: the Yin and Yang of lipid mediators.Tobin, David M; Ramakrishnan, LalitaCurrent opinion in pharmacology2013 Aug641-523849093
Gene transcription is coordinated with, but not dependent on, cell divisions during C. elegans embryonic fate specification.Nair, Gautham; Walton, Travis; Murray, John Isaac; Raj, ArjunDevelopment (Cambridge, England)2013 Aug3385-9423863485
Combining genomic and proteomic approaches for epigenetics research.Han, Yumiao; Garcia, Benjamin AEpigenomics2013 Aug439-5223895656
PQM-1 Complements DAF-16 as a Key Transcriptional Regulator of DAF-2-Mediated Development and Longevity.Tepper, Ronald G; Ashraf, Jasmine; Kaletsky, Rachel; Kleemann, Gunnar; Murphy, Coleen T; Bussemaker, Harmen JCell2013 Aug 1676-9023911329
Tumor-associated macrophages and stromal TNF-ýý regulate collagen structure in a breast tumor model as visualized by second harmonic generation.Burke, Ryan M; Madden, Kelley S; Perry, Seth W; Zettel, Martha L; Brown 3rd, Edward BJournal of biomedical optics2013 Aug8600323912760
Modeling lung deformation: a combined deformable image registration method with spatially varying Young's modulus estimates.Li, Min; Castillo, Edward; Zheng, Xiao-Lin; Luo, Hong-Yan; Castillo, Richard; Wu, Yi; Guerrero, ThomasMedical physics2013 Aug8190223927316
In situ mechanotransduction via vinculin regulates stem cell differentiation.Holle, Andrew W; Tang, Xinyi; Vijayraghavan, Deepthi; Vincent, Ludovic G; Fuhrmann, Alexander; Choi, Yu Suk; Del Alamo, Juan C; Engler, Adam JStem cells (Dayton, Ohio)2013 Jul 29NULL23897765
FtsZ protofilaments use a hinge-opening mechanism for constrictive force generation.Li, Ying; Hsin, Jen; Zhao, Lingyun; Cheng, Yiwen; Shang, Weina; Huang, Kerwyn Casey; Wang, Hong-Wei; Ye, ShengScience (New York, N.Y.)2013 Jul 26392-523888039
Preexisting high frequencies of memory CD8+ T cells favor rapid memory differentiation and preservation of proliferative potential upon boosting.Fraser, Kathryn A; Schenkel, Jason M; Jameson, Stephen C; Vezys, Vaiva; Masopust, DavidImmunity2013 Jul 25171-8323890070
Synthetic biology of antimicrobial discovery.Zakeri, Bijan; Lu, Timothy KACS synthetic biology2013 Jul 19358-7223654251
Low power upconverted near-IR light for efficient polymeric nanoparticle degradation and cargo release.Viger, Mathieu L; Grossman, Madeleine; Fomina, Nadezda; Almutairi, AdahAdvanced materials (Deerfield Beach, Fla.)2013 Jul 193733-823722298
Expanding the structural diversity of polyketides by exploring the cofactor tolerance of an inline methyltransferase domain.Winter, Jaclyn M; Chiou, Grace; Bothwell, Ian R; Xu, Wei; Garg, Neil K; Luo, Minkui; Tang, YiOrganic letters2013 Jul 193774-723837609
Small molecules enable neurogenin 2 to efficiently convert human fibroblasts into cholinergic neurons.Liu, Meng-Lu; Zang, Tong; Zou, Yuhua; Chang, Joshua C; Gibson, Jay R; Huber, Kimberly M; Zhang, Chun-LiNature communications2013 Jul 19218323873306
Resin-assisted enrichment of N-terminal peptides for characterizing proteolytic processing.Kim, Jong-Seo; Dai, Ziyu; Aryal, Uma K; Moore, Ronald J; Camp 2nd, David G; Baker, Scott E; Smith, Richard D; Qian, Wei-JunAnalytical chemistry2013 Jul 166826-3223772796
Dysregulation of PAD4-mediated citrullination of nuclear GSK3ýý activates TGF-ýý signaling and induces epithelial-to-mesenchymal transition in breast cancer cells.Stadler, Sonja C; Vincent, C Theresa; Fedorov, Victor D; Patsialou, Antonia; Cherrington, Brian D; Wakshlag, Joseph J; Mohanan, Sunish; Zee, Barry M; Zhang, Xuesen; Garcia, Benjamin A; Condeelis, John S; Brown, Anthony M C; Coonrod, Scott A; Allis, C DaviProceedings of the National Academy of Sciences of the United States of America2013 Jul 1611851-623818587
Vinculin tension distributions of individual stress fibers within cell-matrix adhesions.Chang, Ching-Wei; Kumar, SanjayJournal of cell science2013 Jul 153021-3023687380
Enzyme-directed assembly of a nanoparticle probe in tumor tissue.Chien, Miao-Ping; Thompson, Matthew P; Barback, Christopher V; Ku, Ti-Hsuan; Hall, David J; Gianneschi, Nathan CAdvanced materials (Deerfield Beach, Fla.)2013 Jul 123599-60423712821
Dot by dot: analyzing the glycome using lectin microarrays.Ribeiro, Joao P; Mahal, Lara KCurrent opinion in chemical biology2013 Jul 12NULL23856055
In vivo robotics: the automation of neuroscience and other intact-system biological fields.Kodandaramaiah, Suhasa B; Boyden, Edward S; Forest, Craig RAnnals of the New York Academy of Sciences2013 Jul 10NULL23841584
Default mode network connectivity distinguishes chemotherapy-treated breast cancer survivors from controls.Kesler, Shelli R; Wefel, Jeffrey S; Hosseini, S M Hadi; Cheung, Maria; Watson, Christa L; Hoeft, FumikoProceedings of the National Academy of Sciences of the United States of America2013 Jul 911600-523798392
An AC electrokinetics facilitated biosensor cassette for rapid pathogen identification.Ouyang, Mengxing; Mohan, Ruchika; Lu, Yi; Liu, Tingting; Mach, Kathleen E; Sin, Mandy L Y; McComb, Mason; Joshi, Janhvi; Gau, Vincent; Wong, Pak Kin; Liao, Joseph CThe Analyst2013 Jul 73660-623626988
Membrane potential mediates the cellular binding of nanoparticles.Shin, Edwin H; Li, Ye; Kumar, Umesh; Sureka, Hursh V; Zhang, Xianren; Payne, Christine KNanoscale2013 Jul 75879-8623698734
Targeted quantification of low ng/mL level proteins in human serum without immunoaffinity depletion.Shi, Tujin; Sun, Xuefei; Gao, Yuqian; Fillmore, Thomas L; Schepmoes, Athena A; Zhao, Rui; He, Jintang; Moore, Ronald J; Kagan, Jacob; Rodland, Karin D; Liu, Tao; Liu, Alvin Y; Smith, Richard D; Tang, Keqi; Camp 2nd, David G; Qian, Wei-JunJournal of proteome research2013 Jul 53353-6123763644
Circulating Tumor Cell Enrichment Based on Physical Properties.Harouaka, Ramdane A; Nisic, Merisa; Zheng, Si-YangJournal of laboratory automation2013 Jul 5NULL23832928
Divin: a small molecule inhibitor of bacterial divisome assembly.Eun, Ye-Jin; Zhou, Maoquan; Kiekebusch, Daniela; Schlimpert, Susan; Trivedi, Rishi R; Bakshi, Somenath; Zhong, Zhou; Wahlig, Taylor A; Thanbichler, Martin; Weibel, Douglas BJournal of the American Chemical Society2013 Jul 39768-7623738839
Engineering Unnatural Variants of Plantazolicin through Codon Reprogramming.Deane, Caitlin D; Melby, Joel O; Molohon, Katie J; Susarrey, Aziz R; Mitchell, Douglas AACS chemical biology2013 Jul 3NULL23823732
Thalamocortical mechanisms for the anteriorization of alpha rhythms during propofol-induced unconsciousness.Vijayan, Sujith; Ching, Shinung; Purdon, Patrick L; Brown, Emery N; Kopell, Nancy JThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Jul 311070-523825412
Overlapping roles for endothelial selectins in murine hematopoietic stem/progenitor cell homing to bone marrow.Nabors, L Karina; Wang, Leo D; Wagers, Amy J; Kansas, Geoffrey SExperimental hematology2013 Jul588-9623499761
Neonatal CSF oxytocin levels are associated with parent report of infant soothability and sociability.Clark, Catherine L; St John, Nicholas; Pasca, Anca M; Hyde, Shellie A; Hornbeak, Kirsten; Abramova, Marina; Feldman, Heidi; Parker, Karen J; Penn, Anna APsychoneuroendocrinology2013 Jul1208-1223507187
A novel porous scaffold fabrication technique for epithelial and endothelial tissue engineering.McHugh, Kevin J; Tao, Sarah L; Saint-Geniez, MagaliJournal of materials science. Materials in medicine2013 Jul1659-7023625319
ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering.Gaj, Thomas; Gersbach, Charles A; Barbas 3rd, Carlos FTrends in biotechnology2013 Jul397-40523664777
Peptidoglycan at its peaks: how chromatographic analyses can reveal bacterial cell wall structure and assembly.Desmarais, Samantha M; De Pedro, Miguel A; Cava, Felipe; Huang, Kerwyn CaseyMolecular microbiology2013 Jul13-Jan23679048
Specification of hepatopancreas progenitors in zebrafish by hnf1ba and wnt2bb.Lancman, Joseph J; Zvenigorodsky, Natasha; Gates, Keith P; Zhang, Danhua; Solomon, Keely; Humphrey, Rohan K; Kuo, Taiyi; Setiawan, Linda; Verkade, Heather; Chi, Young-In; Jhala, Ulupi S; Wright, Christopher V E; Stainier, Didier Y R; Dong, P Duc SiDevelopment (Cambridge, England)2013 Jul2669-7923720049
Enzymatic production of 'monoclonal stoichiometric' single-stranded DNA oligonucleotides.Ducani, Cosimo; Kaul, Corinna; Moche, Martin; Shih, William M; Hogberg, BjornNature methods2013 Jul647-5223727986
Proteomic and genomic approaches reveal critical functions of H3K9 methylation and heterochromatin protein-1ýý in reprogramming to pluripotency.Sridharan, Rupa; Gonzales-Cope, Michelle; Chronis, Constantinos; Bonora, Giancarlo; McKee, Robin; Huang, Chengyang; Patel, Sanjeet; Lopez, David; Mishra, Nilamadhab; Pellegrini, Matteo; Carey, Michael; Garcia, Benjamin A; Plath, KathrinNature cell biology2013 Jul872-8223748610
Mycobacterium tuberculosis mutation rate estimates from different lineages predict substantial differences in the emergence of drug-resistant tuberculosis.Ford, Christopher B; Shah, Rupal R; Maeda, Midori Kato; Gagneux, Sebastien; Murray, Megan B; Cohen, Ted; Johnston, James C; Gardy, Jennifer; Lipsitch, Marc; Fortune, Sarah MNature genetics2013 Jul784-9023749189
DNA methylation impacts gene expression and ensures hypoxic survival of Mycobacterium tuberculosis.Shell, Scarlet S; Prestwich, Erin G; Baek, Seung-Hun; Shah, Rupal R; Sassetti, Christopher M; Dedon, Peter C; Fortune, Sarah MPLoS pathogens2013 Jule100341923853579
Production of ýý-galactosylceramide by a prominent member of the human gut microbiota.Wieland Brown, Laura C; Penaranda, Cristina; Kashyap, Purna C; Williams, Brianna B; Clardy, Jon; Kronenberg, Mitchell; Sonnenburg, Justin L; Comstock, Laurie E; Bluestone, Jeffrey A; Fischbach, Michael APLoS biology2013 Jule100161023874157
Optimal dynamics for quality control in spatially distributed mitochondrial networks.Patel, Pinkesh K; Shirihai, Orian; Huang, Kerwyn CaseyPLoS computational biology2013 Jule100310823874166
Genome-scale co-evolutionary inference identifies functions and clients of bacterial Hsp90.Press, Maximilian O; Li, Hui; Creanza, Nicole; Kramer, Gunter; Queitsch, Christine; Sourjik, Victor; Borenstein, ElhananPLoS genetics2013 Jule100363123874229
Cationic, helical polypeptide-based gene delivery for IMR-90 fibroblasts and human embryonic stem cells.Yen, Jonathan; Zhang, Yanfeng; Gabrielson, Nathan P; Yin, Lichen; Guan, Linna; Chaudhury, Isthier; Lu, Hua; Wang, Fei; Cheng, JianjunBiomaterials science2013 Jul719-72723997932
Bivalent chromatin marks developmental regulatory genes in the mouse embryonic germline inýývivo.Sachs, Michael; Onodera, Courtney; Blaschke, Kathryn; Ebata, Kevin T; Song, Jun S; Ramalho-Santos, MiguelCell reports2013 Jun 271777-8423727241
In vivo cardiac reprogramming contributes to zebrafish heart regeneration.Zhang, Ruilin; Han, Peidong; Yang, Hongbo; Ouyang, Kunfu; Lee, Derek; Lin, Yi-Fan; Ocorr, Karen; Kang, Guson; Chen, Ju; Stainier, Didier Y R; Yelon, Deborah; Chi, Neil CNature2013 Jun 27497-50123783515
Stage-specific regulation of reprogramming to induced pluripotent stem cells by wnt signaling and T cell factor proteins.Ho, Ritchie; Papp, Bernadett; Hoffman, Jackson A; Merrill, Bradley J; Plath, KathrinCell reports2013 Jun 272113-2623791530
The ZFP-1(AF10)/DOT-1 complex opposes H2B ubiquitination to reduce Pol II transcription.Cecere, Germano; Hoersch, Sebastian; Jensen, Morten B; Dixit, Shiv; Grishok, AllaMolecular cell2013 Jun 27894-90723806335
Actuators based on liquid crystalline elastomer materials.Jiang, Hongrui; Li, Chensha; Huang, XuezhenNanoscale2013 Jun 215225-4023648966
The role of SIRT6 protein in aging and reprogramming of human induced pluripotent stem cells.Sharma, Amit; Diecke, Sebastian; Zhang, Wendy Y; Lan, Feng; He, Chunjiang; Mordwinkin, Nicholas M; Chua, Katrin F; Wu, Joseph CThe Journal of biological chemistry2013 Jun 2118439-4723653361
Optoelectronic tweezers integrated with lensfree holographic microscopy for wide-field interactive cell and particle manipulation on a chip.Huang, Kuo-Wei; Su, Ting-Wei; Ozcan, Aydogan; Chiou, Pei-YuLab on a chip2013 Jun 212278-8423661233
Lab-on-a-chip technologies for single-molecule studies.Zhao, Yanhui; Chen, Danqi; Yue, Hongjun; French, Jarrod B; Rufo, Joseph; Benkovic, Stephen J; Huang, Tony JunLab on a chip2013 Jun 212183-9823670195
Multifunctional porous silicon nanopillar arrays: antireflection, superhydrophobicity, photoluminescence, and surface-enhanced Raman scattering.Kiraly, Brian; Yang, Shikuan; Huang, Tony JunNanotechnology2013 Jun 2124570423703091
Postweaning exposure to a high-fat diet is associated with alterations to the hepatic histone code in Japanese macaques.Suter, Melissa A; Takahashi, Diana; Grove, Kevin L; Aagaard, Kjersti MPediatric research2013 Jun 2023788059
Chain-shattering polymeric therapeutics with on-demand drug-release capability.Zhang, Yanfeng; Yin, Qian; Yin, Lichen; Ma, Liang; Tang, Li; Cheng, JianjunAngewandte Chemie (International ed. in English)2013 Jun 176435-923650111
Adhesion to osteopontin in the bone marrow niche regulates lymphoblastic leukemia cell dormancy.Boyerinas, Benjamin; Zafrir, Maya; Yesilkanal, Ali E; Price, Trevor T; Hyjek, Elizabeth M; Sipkins, Dorothy ABlood2013 Jun 134821-3123589674
Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells.Shalek, Alex K; Satija, Rahul; Adiconis, Xian; Gertner, Rona S; Gaublomme, Jellert T; Raychowdhury, Raktima; Schwartz, Schraga; Yosef, Nir; Malboeuf, Christine; Lu, Diana; Trombetta, John J; Gennert, Dave; Gnirke, Andreas; Goren, Alon; Hacohen, Nir; LevinNature2013 Jun 13236-4023685454
Real-time Closed-loop Control in a Rodent Model of Medically Induced Coma Using Burst Suppression.Ching, Shinung; Liberman, Max Y; Chemali, Jessica J; Westover, M Brandon; Kenny, Jonathan; Solt, Ken; Purdon, Patrick L; Brown, Emery NAnesthesiology2013 Jun 13NULL23770601
Extensive Mutagenesis of the HSV-1 gB Ectodomain Reveals Remarkable Stability of Its Postfusion Form.Vitu, Elvira; Sharma, Sapna; Stampfer, Samuel D; Heldwein, Ekaterina EJournal of molecular biology2013 Jun 122056-7123500487
3D printed bionic ears.Mannoor, Manu S; Jiang, Ziwen; James, Teena; Kong, Yong Lin; Malatesta, Karen A; Soboyejo, Winston O; Verma, Naveen; Gracias, David H; McAlpine, Michael CNano letters2013 Jun 122634-923635097
Non-Viral Gene Delivery via Membrane-Penetrating, Mannose-Targeting Supramolecular Self-Assembled Nanocomplexes.Yin, Lichen; Song, Ziyuan; Kim, Kyung Hoon; Zheng, Nan; Gabrielson, Nathan P; Cheng, JianjunAdvanced materials (Deerfield Beach, Fla.)2013 Jun 113063-7023417835
Sex-specific epigenetic disruption and behavioral changes following low-dose in utero bisphenol A exposure.Kundakovic, Marija; Gudsnuk, Kathryn; Franks, Becca; Madrid, Jesus; Miller, Rachel L; Perera, Frederica P; Champagne, Frances AProceedings of the National Academy of Sciences of the United States of America2013 Jun 119956-6123716699
Multimodal magnetic core-shell nanoparticles for effective stem-cell differentiation and imaging.Shah, Birju; Yin, Perry T; Ghoshal, Shraboni; Lee, Ki-BumAngewandte Chemie (International ed. in English)2013 Jun 106190-523650180
Toward giga-pixel nanoscopy on a chip: a computational wide-field look at the nano-scale without the use of lenses.McLeod, Euan; Luo, Wei; Mudanyali, Onur; Greenbaum, Alon; Ozcan, AydoganLab on a chip2013 Jun 72028-3523592185
Overview of high throughput sequencing technologies to elucidate molecular pathways in cardiovascular diseases.Churko, Jared M; Mantalas, Gary L; Snyder, Michael P; Wu, Joseph CCirculation research2013 Jun 71613-2323743227
Genome-wide chromatin interactions of the Nanog locus in pluripotency, differentiation, and reprogramming.Apostolou, Effie; Ferrari, Francesco; Walsh, Ryan M; Bar-Nur, Ori; Stadtfeld, Matthias; Cheloufi, Sihem; Stuart, Hannah T; Polo, Jose M; Ohsumi, Toshiro K; Borowsky, Mark L; Kharchenko, Peter V; Park, Peter J; Hochedlinger, KonradCell stem cell2013 Jun 6699-71223665121
A metabolomic view of how the human gut microbiota impacts the host metabolome using humanized and gnotobiotic mice.Marcobal, A; Kashyap, P C; Nelson, T A; Aronov, P A; Donia, M S; Spormann, A; Fischbach, M A; Sonnenburg, J LThe ISME journal2013 Jun 6NULL23739052
A Novel Model for Evaluating Therapies Targeting Human Tumor Vasculature and Human Cancer Stem-like Cells.Burgos-Ojeda, Daniela; McLean, Karen; Bai, Shoumei; Pulaski, Heather; Gong, Yusong; Silva, Ines; Skorecki, Karl; Tzukerman, Maty; Buckanovich, Ronald JCancer research2013 Jun 523576551
An on-chip, multichannel droplet sorter using standing surface acoustic waves.Li, Sixing; Ding, Xiaoyun; Guo, Feng; Chen, Yuchao; Lapsley, Michael Ian; Lin, Sz-Chin Steven; Wang, Lin; McCoy, J Philip; Cameron, Craig E; Huang, Tony JunAnalytical chemistry2013 Jun 45468-7423647057
Identifying dynamic tuberculosis case-finding policies for HIV/TB coepidemics.Yaesoubi, Reza; Cohen, TedProceedings of the National Academy of Sciences of the United States of America2013 Jun 49457-6223690585
High-throughput optogenetic functional magnetic resonance imaging with parallel computations.Fang, Zhongnan; Lee, Jin HyungJournal of neuroscience methods2013 Jun 4NULL23747482
Craniofacial and dental development in cardio-facio-cutaneous syndrome: the importance of Ras signaling homeostasis.Goodwin, A F; Oberoi, S; Landan, M; Charles, C; Groth, J; Martinez, A; Fairley, C; Weiss, L A; Tidyman, W E; Klein, O D; Rauen, K AClinical genetics2013 Jun539-4422946697
Use of 4-dimensional computed tomography-based ventilation imaging to correlate lung dose and function with clinical outcomes.Vinogradskiy, Yevgeniy; Castillo, Richard; Castillo, Edward; Tucker, Susan L; Liao, Zhongxing; Guerrero, Thomas; Martel, Mary KInternational journal of radiation oncology, biology, physics2013 Jun 1366-7123474113
The regulatory power of glycans and their binding partners in immunity.Johnson, Jenny L; Jones, Mark B; Ryan, Sean O; Cobb, Brian ATrends in immunology2013 Jun290-823485517
Is minimal residual disease monitoring clinically relevant in adults with acute myelogenous leukemia?Carlson, Karen-Sue B; Guzman, Monica LCurrent hematologic malignancy reports2013 Jun109-1523563936
Advancing bacteriophage-based microbial diagnostics with synthetic biology.Lu, Timothy K; Bowers, Jayson; Koeris, Michael STrends in biotechnology2013 Jun325-723608522
viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia.Amir, El-ad David; Davis, Kara L; Tadmor, Michelle D; Simonds, Erin F; Levine, Jacob H; Bendall, Sean C; Shenfeld, Daniel K; Krishnaswamy, Smita; Nolan, Garry P; Pe'er, DanaNature biotechnology2013 Jun545-5223685480
linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis.Maamar, Hedia; Cabili, Moran N; Rinn, John; Raj, ArjunGenes & development2013 Jun 11260-7123723417
Magnetoencephalography correlate of EEG POSTS (positive occipital sharp transients of sleep).Kakisaka, Yosuke; Wang, Zhong I; Enatsu, Rei; Dubarry, Anne-Sophie; Mosher, John C; Alexopoulos, Andreas V; Burgess, Richard CJournal of clinical neurophysiology : official publication of the American Electroencephalographic Society2013 Jun235-723733086
FGFR fusions in the driver's seat.Sabnis, Amit J; Bivona, Trever GCancer discovery2013 Jun607-923749526
Towards a whole-cell modeling approach for synthetic biology.Purcell, Oliver; Jain, Bonny; Karr, Jonathan R; Covert, Markus W; Lu, Timothy KChaos (Woodbury, N.Y.)2013 Jun2511223822510
Bacteria-human somatic cell lateral gene transfer is enriched in cancer samples.Riley, David R; Sieber, Karsten B; Robinson, Kelly M; White, James Robert; Ganesan, Ashwinkumar; Nourbakhsh, Syrus; Dunning Hotopp, Julie CPLoS computational biology2013 June100310723840181
Poly(lactic-co-glycolic acid) encapsulated gadolinium oxide nanoparticles for MRI-based cell tracking.Bennewitz, Margaret F; Williams, Simone S; Nkansah, Michael K; Shapiro, Erik MJournal of nanoscience and nanotechnology2013 Jun3778-8323862407
Nonporous Silica Nanoparticles for Nanomedicine Application.Tang, Li; Cheng, JianjunNano today2013 Jun290-31223997809
The innate immune DNA sensor cGAS produces a noncanonical cyclic dinucleotide that activates human STING.Diner, Elie J; Burdette, Dara L; Wilson, Stephen C; Monroe, Kathryn M; Kellenberger, Colleen A; Hyodo, Mamoru; Hayakawa, Yoshihiro; Hammond, Ming C; Vance, Russell ECell reports2013 May 301355-6123707065
Collective activation of MRI agents via encapsulation and disease-triggered release.Viger, Mathieu L; Sankaranarayanan, Jagadis; de Gracia Lux, Caroline; Chan, Minnie; Almutairi, AdahJournal of the American Chemical Society2013 May 297847-5023672342
The Ion Channel TRPA1 Is Required for Chronic Itch.Wilson, Sarah R; Nelson, Aislyn M; Batia, Lyn; Morita, Takeshi; Estandian, Daniel; Owens, David M; Lumpkin, Ellen A; Bautista, Diana MThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 May 299283-929423719797
Enzyme-Directed Assembly of a Nanoparticle Probe in Tumor Tissue.Chien, Miao-Ping; Thompson, Matthew P; Barback, Christopher V; Ku, Ti-Hsuan; Hall, David J; Gianneschi, Nathan CAdvanced materials (Deerfield Beach, Fla.)2013 May 2823712821
Supramolecular self-assembled nanoparticles mediate oral delivery of therapeutic TNF-ýý siRNA against systemic inflammation.Yin, Lichen; Song, Ziyuan; Qu, Qiuhao; Kim, Kyung Hoon; Zheng, Nan; Yao, Catherine; Chaudhury, Isthier; Tang, Haoyu; Gabrielson, Nathan P; Uckun, Fatih M; Cheng, JianjunAngewandte Chemie (International ed. in English)2013 May 275757-6123610013
Live-cell imaging of exocyst links its spatiotemporal dynamics to various stages of vesicle fusion.Rivera-Molina, Felix; Toomre, DerekThe Journal of cell biology2013 May 27673-8023690179
Exome sequencing to identify de novo mutations in sporadic ALS trios.Chesi, Alessandra; Staahl, Brett T; Jovicic, Ana; Couthouis, Julien; Fasolino, Maria; Raphael, Alya R; Yamazaki, Tomohiro; Elias, Laura; Polak, Meraida; Kelly, Crystal; Williams, Kelly L; Fifita, Jennifer A; Maragakis, Nicholas J; Nicholson, Garth A; KingNature neuroscience2013 May 26851-85523708140
Nanoscale liposomal formulation of a SYK P-site inhibitor against B-precursor leukemia.Uckun, Fatih M; Qazi, Sanjive; Cely, Ingrid; Sahin, Kazim; Shahidzadeh, Anoush; Ozercan, Ibrahim; Yin, Qian; Gaynon, Paul; Termuhlen, Amanda; Cheng, Jianjun; Yiv, SeangBlood2013 May 234348-5423568490
Longitudinal Relationships Between College Education and Patterns of Heavy Drinking: A Comparison Between Caucasians and African-Americans.Chen, Pan; Jacobson, Kristen CThe Journal of adolescent health : official publication of the Society for Adolescent Medicine2013 May 2323707401
Intramolecular Cyclization for Stimuli-Controlled Depolymerization of Polycaprolactone Particles Leading to Disassembly and Payload Release.de Gracia Lux, Caroline; Almutairi, AdahACS macro letters2013 May 21432-43523814697
Optogenetic drive of neocortical pyramidal neurons generates fMRI signals that are correlated with spiking activity.Kahn, I; Knoblich, U; Desai, M; Bernstein, J; Graybiel, A M; Boyden, E S; Buckner, R L; Moore, C IBrain research2013 May 2033-4523523914
Wide-field computational color imaging using pixel super-resolved on-chip microscopy.Greenbaum, Alon; Feizi, Alborz; Akbari, Najva; Ozcan, AydoganOptics express2013 May 2012469-8323736466
Cytotoxicity, cytocompatibility, cell-labeling efficiency, and in vitro cellular magnetic resonance imaging of gadolinium-catalyzed single-walled carbon nanotubes.Avti, Pramod K; Caparelli, Elisabeth D; Sitharaman, BalajiJournal of biomedical materials research. Part A2013 May 1823686792
Inhibition of PRC2 activity by a gain-of-function H3 mutation found in pediatric glioblastoma.Lewis, Peter W; Muller, Manuel M; Koletsky, Matthew S; Cordero, Francisco; Lin, Shu; Banaszynski, Laura A; Garcia, Benjamin A; Muir, Tom W; Becher, Oren J; Allis, C DavidScience (New York, N.Y.)2013 May 17857-6123539183
Thiol-ene Enabled Detection of Thiophosphorylated Kinase Substrates.Garber, Kathleen C A; Carlson, Erin EACS chemical biology2013 May 1723668631
Stochastic gene expression in mammals: lessons from olfaction.Magklara, Angeliki; Lomvardas, StavrosTrends in cell biology2013 May 1723689023
Protective astrogenesis from the SVZ niche after injury is controlled by Notch modulator Thbs4.Benner, Eric J; Luciano, Dominic; Jo, Rebecca; Abdi, Khadar; Paez-Gonzalez, Patricia; Sheng, Huaxin; Warner, David S; Liu, Chunlei; Eroglu, Cagla; Kuo, Chay TNature2013 May 16369-7323615612
Polarizing pathways: Balancing endothelial polarity, permeability, and lumen formation.Lizama, Carlos O; Zovein, Ann CExperimental cell research2013 May 151247-5423567183
Neutrophils confer T cell resistance to myeloid-derived suppressor cell-mediated suppression to promote chronic inflammation.Ryan, Sean O; Johnson, Jenny L; Cobb, Brian AJournal of immunology (Baltimore, Md. : 1950)2013 May 155037-4723576679
Impulsivity Moderates Promotive Environmental Influences on Adolescent Delinquency: A Comparison Across Family, School, and Neighborhood Contexts.Chen, Pan; Jacobson, Kristen CJournal of abnormal child psychology2013 May 1523673971
Curcumin as an amyloid-indicator dye in E. coli.McCrate, Oscar A; Zhou, Xiaoxue; Cegelski, LynetteChemical communications (Cambridge, England)2013 May 144193-523287899
Recovering degraded quasi-solid-state dye-sensitized solar cells by applying electrical pulses.Zhang, Xi; Huang, Xuezhen; Jiang, HongruiPhysical chemistry chemical physics : PCCP2013 May 146864-923545782
Bacteria-surface interactions.Tuson, Hannah H; Weibel, Douglas BSoft matter2013 May 144368-438023930134
Growth differentiation factor 11 is a circulating factor that reverses age-related cardiac hypertrophy.Loffredo, Francesco S; Steinhauser, Matthew L; Jay, Steven M; Gannon, Joseph; Pancoast, James R; Yalamanchi, Pratyusha; Sinha, Manisha; Dall'Osso, Claudia; Khong, Danika; Shadrach, Jennifer L; Miller, Christine M; Singer, Britta S; Stewart, Alex; PsychogiCell2013 May 9828-3923663781
ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering.Gaj, Thomas; Gersbach, Charles A; Barbas 3rd, Carlos FTrends in biotechnology2013 May 823664777
Optoacoustic tweezers: a programmable, localized cell concentrator based on opto-thermally generated, acoustically activated, surface bubbles.Xie, Yuliang; Zhao, Chenglong; Zhao, Yanhui; Li, Sixing; Rufo, Joseph; Yang, Shikuan; Guo, Feng; Huang, Tony JunLab on a chip2013 May 71772-923511348
Microchamber integration unifies distinct separation modes for two-dimensional electrophoresis.Tentori, Augusto M; Hughes, Alex J; Herr, Amy EAnalytical chemistry2013 May 74538-4523565932
A reference dataset for deformable image registration spatial accuracy evaluation using the COPDgene study archive.Castillo, Richard; Castillo, Edward; Fuentes, David; Ahmad, Moiz; Wood, Abbie M; Ludwig, Michelle S; Guerrero, ThomasPhysics in medicine and biology2013 May 72861-7723571679
Cognitive Training for Improving Executive Function in Chemotherapy-Treated Breast Cancer Survivors.Kesler, Shelli; Hosseini, S M Hadi; Heckler, Charles; Janelsins, Michelle; Palesh, Oxana; Mustian, Karen; Morrow, GaryClinical breast cancer2013 May 323647804
Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo.Ramos, Alexander D; Diaz, Aaron; Nellore, Abhinav; Delgado, Ryan N; Park, Ki-Youb; Gonzales-Roybal, Gabriel; Oldham, Michael C; Song, Jun S; Lim, Daniel ACell stem cell2013 May 2616-2823583100
Engineering superficial zone features in tissue engineered cartilage.Chen, Tony; Hilton, Matthew J; Brown, Edward B; Zuscik, Michael J; Awad, Hani ABiotechnology and bioengineering2013 May1476-8623239161
Breakpoint profiling of 64 cancer genomes reveals numerous complex rearrangements spawned by homology-independent mechanisms.Malhotra, Ankit; Lindberg, Michael; Faust, Gregory G; Leibowitz, Mitchell L; Clark, Royden A; Layer, Ryan M; Quinlan, Aaron R; Hall, Ira MGenome research2013 May762-7623410887
Genomics of Loa loa, a Wolbachia-free filarial parasite of humans.Desjardins, Christopher A; Cerqueira, Gustavo C; Goldberg, Jonathan M; Dunning Hotopp, Julie C; Haas, Brian J; Zucker, Jeremy; Ribeiro, Jose M C; Saif, Sakina; Levin, Joshua Z; Fan, Lin; Zeng, Qiandong; Russ, Carsten; Wortman, Jennifer R; Fink, Doran L; BNature genetics2013 May495-50023525074
Sensing and alarm function of resident memory CD8ýýý T cells.Schenkel, Jason M; Fraser, Kathryn A; Vezys, Vaiva; Masopust, DavidNature immunology2013 May509-1323542740
Regeneration and experimental orthotopic transplantation of a bioengineered kidney.Song, Jeremy J; Guyette, Jacques P; Gilpin, Sarah E; Gonzalez, Gabriel; Vacanti, Joseph P; Ott, Harald CNature medicine2013 May646-5123584091
CRISPR decoys: competitive inhibitors of CRISPR immunity.Maniv, Inbal; Hatoum-Aslan, Asma; Marraffini, Luciano ARNA biology2013 May694-923584158
The integration of T cell migration, differentiation and function.Masopust, David; Schenkel, Jason MNature reviews. Immunology2013 May309-2023598650
Large-scale global identification of protein lysine methylation in vivo.Cao, Xing-Jun; Arnaudo, Anna M; Garcia, Benjamin AEpigenetics : official journal of the DNA Methylation Society2013 May477-8523644510
Models of signalling networks - what cell biologists can gain from them and give to them.Janes, Kevin A; Lauffenburger, Douglas AJournal of cell science2013 May 11913-2123720376
The vacuole within: how cellular organization dictates notochord function.Ellis, Kathryn; Hoffman, Brenton D; Bagnat, MichelBioarchitecture2013 May-Jun64-823887209
A statistical modeling approach for tumor-type identification in surgical neuropathology using tissue mass spectrometry imaging.Gholami, Behnood; Norton, Isaiah; Eberlin, Livia S; Agar, Nathalie Y RIEEE journal of biomedical and health informatics2013 May734-4424592474
Stress granules as crucibles of ALS pathogenesis.Li, Yun R; King, Oliver D; Shorter, James; Gitler, Aaron DThe Journal of cell biology2013 Apr 29361-7223629963
Quantitative dynamics of the link between cellular metabolism and histone acetylation.Evertts, Adam G; Zee, Barry M; Dimaggio, Peter A; Gonzales-Cope, Michelle; Coller, Hilary A; Garcia, Benjamin AThe Journal of biological chemistry2013 Apr 2612142-5123482559
Torque spectroscopy of DNA: base-pair stability, boundary effects, backbending, and breathing dynamics.Oberstrass, Florian C; Fernandes, Louis E; Lebel, Paul; Bryant, ZevPhysical review letters2013 Apr 2617810323679785
Punctuated evolution of prostate cancer genomes.Baca, Sylvan C; Prandi, Davide; Lawrence, Michael S; Mosquera, Juan Miguel; Romanel, Alessandro; Drier, Yotam; Park, Kyung; Kitabayashi, Naoki; MacDonald, Theresa Y; Ghandi, Mahmoud; Van Allen, Eliezer; Kryukov, Gregory V; Sboner, Andrea; Theurillat, JeanCell2013 Apr 25666-7723622249
A comprehensive mathematical model for three-body binding equilibria.Douglass Jr, Eugene F; Miller, Chad J; Sparer, Gerson; Shapiro, Harold; Spiegel, David AJournal of the American Chemical Society2013 Apr 246092-923544844
Defective axonal transport of Rab7 GTPase results in dysregulated trophic signaling.Zhang, Kai; Fishel Ben Kenan, Rotem; Osakada, Yasuko; Xu, Wei; Sinit, Rachel S; Chen, Liang; Zhao, Xiaobei; Chen, Jia-Yun; Cui, Bianxiao; Wu, ChengbiaoThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Apr 247451-6223616551
Drug screening using a library of human induced pluripotent stem cell-derived cardiomyocytes reveals disease-specific patterns of cardiotoxicity.Liang, Ping; Lan, Feng; Lee, Andrew S; Gong, Tingyu; Sanchez-Freire, Veronica; Wang, Yongming; Diecke, Sebastian; Sallam, Karim; Knowles, Joshua W; Wang, Paul J; Nguyen, Patricia K; Bers, Donald M; Robbins, Robert C; Wu, Joseph CCirculation2013 Apr 231677-9123519760
Tunable nanowire patterning using standing surface acoustic waves.Chen, Yuchao; Ding, Xiaoyun; Steven Lin, Sz-Chin; Yang, Shikuan; Huang, Po-Hsun; Nama, Nitesh; Zhao, Yanhui; Nawaz, Ahmad Ahsan; Guo, Feng; Wang, Wei; Gu, Yeyi; Mallouk, Thomas E; Huang, Tony JunACS nano2013 Apr 233306-1423540330
Regulation of Torsin ATPases by LAP1 and LULL1.Zhao, Chenguang; Brown, Rebecca S H; Chase, Anna R; Eisele, Markus R; Schlieker, ChristianProceedings of the National Academy of Sciences of the United States of America2013 Apr 23E1545-5423569223
Unconventional microfluidics: expanding the discipline.Nawaz, Ahmad Ahsan; Mao, Xiaole; Stratton, Zackary S; Huang, Tony JunLab on a chip2013 Apr 211457-6323478651
Integration of solid-state nanopores in a 0.5ýýýým CMOS foundry process.Uddin, A; Yemenicioglu, S; Chen, C-H; Corigliano, E; Milaninia, K; Theogarajan, LNanotechnology2013 Apr 1915550123519330
Anomalous Gray Matter Structural Networks in Major Depressive Disorder.Singh, Manpreet K; Kesler, Shelli R; Hadi Hosseini, S M; Kelley, Ryan G; Amatya, Debha; Hamilton, J Paul; Chen, Michael C; Gotlib, Ian HBiological psychiatry2013 Apr 1823601854
Design of net-charged abc-type collagen heterotrimers.Parmar, Avanish S; Zahid, Sohail; Belure, Sandeep V; Young, Robert; Hasan, Nida; Nanda, VikasJournal of structural biology2013 Apr 18NULL23603270
Active Microscope Stabilization in Three Dimensions Using Image Correlation.McGorty, Ryan; Kamiyama, Daichi; Huang, BoOptical nanoscopy2013 Apr 18NULL24380058
Metalloprotein-based MRI probes.Matsumoto, Yuri; Jasanoff, AlanFEBS letters2013 Apr 171021-923376346
Single cell antimicrobial susceptibility testing by confined microchannels and electrokinetic loading.Lu, Yi; Gao, Jian; Zhang, Donna D; Gau, Vincent; Liao, Joseph C; Wong, Pak KinAnalytical chemistry2013 Apr 163971-623445209
Transcriptional stalling in B-lymphocytes: A mechanism for antibody diversification and maintenance of genomic integrity.Sun, Jianbo; Rothschild, Gerson; Pefanis, Evangelos; Basu, UttiyaTranscription2013 Apr 12NULL23584095
Polymerization of a peptide-based enzyme substrate.Hahn, Michael E; Randolph, Lyndsay M; Adamiak, Lisa; Thompson, Matthew P; Gianneschi, Nathan CChemical communications (Cambridge, England)2013 Apr 112873-523450132
Single cell optical imaging and spectroscopy.Stender, Anthony S; Marchuk, Kyle; Liu, Chang; Sander, Suzanne; Meyer, Matthew W; Smith, Emily A; Neupane, Bhanu; Wang, Gufeng; Li, Junjie; Cheng, Ji-Xin; Huang, Bo; Fang, NingChemical reviews2013 Apr 102469-52723410134
Community-wide isoniazid preventive therapy drives drug-resistant tuberculosis: a model-based analysis.Mills, Harriet L; Cohen, Ted; Colijn, CarolineScience translational medicine2013 Apr 10180ra4923576815
Mechanism of voltage-sensitive fluorescence in a microbial rhodopsin.Maclaurin, Dougal; Venkatachalam, Veena; Lee, Hohjai; Cohen, Adam EProceedings of the National Academy of Sciences of the United States of America2013 Apr 95939-4423530193
Synthesis of photodegradable macromers for conjugation and release of bioactive molecules.Griffin, Donald R; Schlosser, Jessica L; Lam, Sandra F; Nguyen, Thi H; Maynard, Heather D; Kasko, Andrea MBiomacromolecules2013 Apr 81199-20723506440
Clinically viable magnetic poly(lactide-co-glycolide) particles for MRI-based cell tracking.Granot, Dorit; Nkansah, Michael K; Bennewitz, Margaret F; Tang, Kevin S; Markakis, Eleni A; Shapiro, Erik MMagnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine2013 Apr 823568825
Optical phase conjugation (OPC)-assisted isotropic focusing.Jang, Mooseok; Sentenac, Anne; Yang, ChanghueiOptics express2013 Apr 88781-9223571967
Cost-effective and rapid blood analysis on a cell-phone.Zhu, Hongying; Sencan, Ikbal; Wong, Justin; Dimitrov, Stoyan; Tseng, Derek; Nagashima, Keita; Ozcan, AydoganLab on a chip2013 Apr 71282-823392286
The magnetic, relaxometric, and optical properties of gadolinium-catalyzed single walled carbon nanotubes.Sitharaman, Balaji; Jacobson, Barry D; Wadghiri, Youssef Z; Bryant, Henry; Frank, JosephJournal of applied physics2013 Apr 713430823653487
Toward single-walled carbon nanotube-gadolinium complex as advanced MRI contrast agents: Pharmacodynamics and global genomic response in small animals.Avti, Pramod K; Talukdar, Yahfi; Sirotkin, Matvey V; Shroyer, Kenneth R; Sitharaman, BalajiJournal of biomedical materials research. Part B, Applied biomaterials2013 Apr 423559429
RNA-based fluorescent biosensors for live cell imaging of second messengers cyclic di-GMP and cyclic AMP-GMP.Kellenberger, Colleen A; Wilson, Stephen C; Sales-Lee, Jade; Hammond, Ming CJournal of the American Chemical Society2013 Apr 34906-923488798
Cell-based therapeutics: the next pillar of medicine.Fischbach, Michael A; Bluestone, Jeffrey A; Lim, Wendell AScience translational medicine2013 Apr 3179ps723552369
Disease-causing Mitochondrial Heteroplasmy Segregated within Induced Pluripotent Stem Cell Clones Derived from A MELAS Patient.Folmes, Clifford D L; Martinez-Fernandez, Almudena; Perales-Clemente, Ester; Li, Xing; McDonald, Amber; Oglesbee, Devin; Hrstka, Sybil C; Perez-Terzic, Carmen; Terzic, Andre; Nelson, Timothy JStem cells (Dayton, Ohio)2013 Apr 323553816
EBF2 determines and maintains brown adipocyte identity.Rajakumari, Sona; Wu, Jun; Ishibashi, Jeff; Lim, Hee-Woong; Giang, An-Hoa; Won, Kyoung-Jae; Reed, Randall R; Seale, PatrickCell metabolism2013 Apr 2562-7423499423
Early interactions with mother and peers independently build adult social skills and shape BDNF and oxytocin receptor brain levels.Branchi, Igor; Curley, James P; D'Andrea, Ivana; Cirulli, Francesca; Champagne, Frances A; Alleva, EnricoPsychoneuroendocrinology2013 Apr522-3222910688
Bringing balance by force: live cell extrusion controls epithelial cell numbers.Eisenhoffer, George T; Rosenblatt, JodyTrends in cell biology2013 Apr185-9223273931
Quantitative site-specific reactivity profiling of S-nitrosylation in mouse skeletal muscle using cysteinyl peptide enrichment coupled with mass spectrometry.Su, Dian; Shukla, Anil K; Chen, Baowei; Kim, Jong-Seo; Nakayasu, Ernesto; Qu, Yi; Aryal, Uma; Weitz, Karl; Clauss, Therese R W; Monroe, Matthew E; Camp 2nd, David G; Bigelow, Diana J; Smith, Richard D; Kulkarni, Rohit N; Qian, Wei-JunFree radical biology & medicine2013 Apr68-7823277143
Psychosocial issues in pediatric inflammatory bowel disease: report of the North American Society for Pediatric Gastroenterology, Hepatology, and Nutrition.Mackner, Laura M; Greenley, Rachel Neff; Szigethy, Eva; Herzer, Michele; Deer, Kate; Hommel, Kevin AJournal of pediatric gastroenterology and nutrition2013 Apr449-5823287808
Viral transduction of the neonatal brain delivers controllable genetic mosaicism for visualising and manipulating neuronal circuits in vivo.Kim, Ji-Yoen; Ash, Ryan T; Ceballos-Diaz, Carolina; Levites, Yona; Golde, Todd E; Smirnakis, Stelios M; Jankowsky, Joanna LThe European journal of neuroscience2013 Apr1203-2023347239
Exploiting social evolution in biofilms.Boyle, Kerry E; Heilmann, Silja; van Ditmarsch, Dave; Xavier, Joao BCurrent opinion in microbiology2013 Apr207-1223357558
MicroRNAs: regulators of neuronal fate.Sun, Alfred X; Crabtree, Gerald R; Yoo, Andrew SCurrent opinion in cell biology2013 Apr215-2123374323
Proteomic analysis of ubiquitin ligase KEAP1 reveals associated proteins that inhibit NRF2 ubiquitination.Hast, Bridgid E; Goldfarb, Dennis; Mulvaney, Kathleen M; Hast, Michael A; Siesser, Priscila F; Yan, Feng; Hayes, D Neil; Major, Michael BCancer research2013 Apr 12199-21023382044
Mesenchymal stem cell durotaxis depends on substrate stiffness gradient strength.Vincent, Ludovic G; Choi, Yu Suk; Alonso-Latorre, Baldomero; del Alamo, Juan C; Engler, Adam JBiotechnology journal2013 Apr472-8423390141
Cftr controls lumen expansion and function of Kupffer's vesicle in zebrafish.Navis, Adam; Marjoram, Lindsay; Bagnat, MichelDevelopment (Cambridge, England)2013 Apr1703-1223487313
Exterior design: strategies for redecorating the bacterial surface with small molecules.Gautam, Samir; Gniadek, Thomas J; Kim, Taehan; Spiegel, David ATrends in biotechnology2013 Apr258-6723490213
Deciphering molecular circuits from genetic variation underlying transcriptional responsiveness to stimuli.Gat-Viks, Irit; Chevrier, Nicolas; Wilentzik, Roni; Eisenhaure, Thomas; Raychowdhury, Raktima; Steuerman, Yael; Shalek, Alex K; Hacohen, Nir; Amit, Ido; Regev, AvivNature biotechnology2013 Apr342-923503680
The role of single-cell analyses in understanding cell lineage commitment.Gibson, Tyler M; Gersbach, Charles ABiotechnology journal2013 Apr397-40723520130
DNA nanotubes for NMR structure determination of membrane proteins.Bellot, Gaetan; McClintock, Mark A; Chou, James J; Shih, William MNature protocols2013 Apr755-7023589936
Beyond the cytoskeleton: mesoscale assemblies and their function in spatial organization.Wilson, Maxwell Z; Gitai, ZemerCurrent opinion in microbiology2013 Apr177-8323601587
Speckle-scale focusing in the diffusive regime with time-reversal of variance-encoded light (TROVE).Judkewitz, Benjamin; Wang, Ying Min; Horstmeyer, Roarke; Mathy, Alexandre; Yang, ChanghueiNature photonics2013 Apr 1300-30523814605
The effect of cryoprotection on the use of PLGA encapsulated iron oxide nanoparticles for magnetic cell labeling.Tang, Kevin S; Hashmi, Sarah M; Shapiro, Erik MNanotechnology2013 Mar 2912510123459030
Mutations in prion-like domains in hnRNPA2B1 and hnRNPA1 cause multisystem proteinopathy and ALS.Kim, Hong Joo; Kim, Nam Chul; Wang, Yong-Dong; Scarborough, Emily A; Moore, Jennifer; Diaz, Zamia; MacLea, Kyle S; Freibaum, Brian; Li, Songqing; Molliex, Amandine; Kanagaraj, Anderson P; Carter, Robert; Boylan, Kevin B; Wojtas, Aleksandra M; Rademakers, Nature2013 Mar 28467-7323455423
The pluripotency factor-bound intron 1 of Xist is dispensable for X chromosome inactivation and reactivation in vitro and in vivo.Minkovsky, Alissa; Barakat, Tahsin Stefan; Sellami, Nadia; Chin, Mark Henry; Gunhanlar, Nilhan; Gribnau, Joost; Plath, KathrinCell reports2013 Mar 28905-1823523354
Elevated prefrontal myo-inositol and choline following breast cancer chemotherapy.Kesler, Shelli R; Watson, Christa; Koovakkattu, Della; Lee, Clement; O'Hara, Ruth; Mahaffey, Misty L; Wefel, Jeffrey SBrain imaging and behavior2013 Mar 2823536015
Versatile fluorescence resonance energy transfer-based mesoporous silica nanoparticles for real-time monitoring of drug release.Lai, Jinping; Shah, Birju P; Garfunkel, Eric; Lee, Ki-BumACS nano2013 Mar 262741-5023445171
Cutting through the complexity of cell collectives.Nadell, Carey D; Bucci, Vanni; Drescher, Knut; Levin, Simon A; Bassler, Bonnie L; Xavier, Joao BProceedings. Biological sciences / The Royal Society2013 Mar 222012277023363630
Functional organization of human sensorimotor cortex for speech articulation.Bouchard, Kristofer E; Mesgarani, Nima; Johnson, Keith; Chang, Edward FNature2013 Mar 21327-3223426266
Nonlinear scaling of surface water diffusion with bulk water viscosity of crowded solutions.Franck, John M; Scott, John A; Han, SongiJournal of the American Chemical Society2013 Mar 204175-823347324
Electroencephalogram signatures of loss and recovery of consciousness from propofol.Purdon, Patrick L; Pierce, Eric T; Mukamel, Eran A; Prerau, Michael J; Walsh, John L; Wong, Kin Foon K; Salazar-Gomez, Andres F; Harrell, Priscilla G; Sampson, Aaron L; Cimenser, Aylin; Ching, ShiNung; Kopell, Nancy J; Tavares-Stoeckel, Casie; Habeeb, KatProceedings of the National Academy of Sciences of the United States of America2013 Mar 19E1142-5123487781
Poly(2 deoxy 2 methacrylamido glucopyranose) b Poly(methacrylate amine)s: Optimization of Diblock Glycopol ycations for Nucleic Acid Delivery.Li, Haibo; Cortez, Mallory A; Phillips, Haley R; Wu, Yaoying; Reineke, Theresa MACS macro letters2013 Mar 19NULL24179703
Essential and unexpected role of Yin Yang 1 to promote mesodermal cardiac differentiation.Gregoire, Serge; Karra, Ravi; Passer, Derek; Deutsch, Marcus-Andre; Krane, Markus; Feistritzer, Rebecca; Sturzu, Anthony; Domian, Ibrahim; Saga, Yumiko; Wu, Sean MCirculation research2013 Mar 15900-1023307821
At a crossroad: cell therapy for cardiac repair.Deutsch, Marcus-Andre; Sturzu, Anthony; Wu, Sean MCirculation research2013 Mar 15884-9023493304
Epigenetics of reprogramming to induced pluripotency.Papp, Bernadett; Plath, KathrinCell2013 Mar 141324-4323498940
Nuclear biology: what's been most surprising?Dekker, Job; Wysocka, Joanna; Mattaj, Iain; Lieberman Aiden, Erez; Pikaard, CraigCell2013 Mar 141207-823616995
Diverse visual features encoded in mouse lateral geniculate nucleus.Piscopo, Denise M; El-Danaf, Rana N; Huberman, Andrew D; Niell, Cristopher MThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Mar 134642-5623486939
Oxime Cross-Linked Injectable Hydrogels for Catheter Delivery.Grover, Gregory N; Braden, Rebecca L; Christman, Karen LAdvanced materials (Deerfield Beach, Fla.)2013 Mar 12NULL23495015
Expression of fluorescent cyclotides using protein trans-splicing for easy monitoring of cyclotide-protein interactions.Jagadish, Krishnappa; Borra, Radhika; Lacey, Vanessa; Majumder, Subhabrata; Shekhtman, Alexander; Wang, Lei; Camarero, Julio AAngewandte Chemie (International ed. in English)2013 Mar 113126-3123322720
Two-dimensional nanostructure-reinforced biodegradable polymeric nanocomposites for bone tissue engineering.Lalwani, Gaurav; Henslee, Allan M; Farshid, Behzad; Lin, Liangjun; Kasper, F Kurtis; Qin, Yi-Xian; Mikos, Antonios G; Sitharaman, BalajiBiomacromolecules2013 Mar 11900-923405887
Drug-initiated ring-opening polymerization of O-carboxyanhydrides for the preparation of anticancer drug-poly(O-carboxyanhydride) nanoconjugates.Yin, Qian; Tong, Rong; Xu, Yunxiang; Baek, Kwanghyun; Dobrucki, Lawrence W; Fan, Timothy M; Cheng, JianjunBiomacromolecules2013 Mar 11920-923445497
Protein post-translational modification analyses using on-chip immunoprobed isoelectric focusing.Tia, Samuel Q; Brown, Katharine; Chen, Danica; Herr, Amy EAnalytical chemistry2013 Mar 52882-9023363036
Interfacing lipid bilayer nanodiscs and silicon photonic sensor arrays for multiplexed protein-lipid and protein-membrane protein interaction screening.Sloan, Courtney D Kuhnline; Marty, Michael T; Sligar, Stephen G; Bailey, Ryan CAnalytical chemistry2013 Mar 52970-623425255
Size-dependent tumor penetration and in vivo efficacy of monodisperse drug-silica nanoconjugates.Tang, Li; Gabrielson, Nathan P; Uckun, Fatih M; Fan, Timothy M; Cheng, JianjunMolecular pharmaceutics2013 Mar 4883-9223301497
Notochord vacuoles are lysosome-related organelles that function in axis and spine morphogenesis.Ellis, Kathryn; Bagwell, Jennifer; Bagnat, MichelThe Journal of cell biology2013 Mar 4667-7923460678
Early impact of social isolation and breast tumor progression in mice.Madden, Kelley S; Szpunar, Mercedes J; Brown, Edward BBrain, behavior, and immunity2013 MarS135-4122610067
Reduced hippocampal volume and verbal memory performance associated with interleukin-6 and tumor necrosis factor-alpha levels in chemotherapy-treated breast cancer survivors.Kesler, Shelli; Janelsins, Michelle; Koovakkattu, Della; Palesh, Oxana; Mustian, Karen; Morrow, Gary; Dhabhar, Firdaus SBrain, behavior, and immunity2013 MarS109-1622698992
Sequence recombination improves target specificity in a redesigned collagen peptide abc-type heterotrimer.Giddu, Sumana; Xu, Fei; Nanda, VikasProteins2013 Mar386-9323042255
Design of three-dimensional engineered protein hydrogels for tailored control of neurite growth.Lampe, Kyle J; Antaris, Alexander L; Heilshorn, Sarah CActa biomaterialia2013 Mar5590-923128159
Second harmonic generation reveals matrix alterations during breast tumor progression.Burke, Kathleen; Tang, Ping; Brown, EdwardJournal of biomedical optics2013 Mar3110623172133
Turning single cells into microarrays by super-resolution barcoding.Cai, LongBriefings in functional genomics2013 Mar75-8023178478
Pegylated interferon fractal pharmacokinetics: individualized dosing for hepatitis C virus infection.Jain, Mamta K; Pasipanodya, Jotam G; Alder, Lara; Lee, William M; Gumbo, TawandaAntimicrobial agents and chemotherapy2013 Mar1115-2023183434
Protein-engineered injectable hydrogel to improve retention of transplanted adipose-derived stem cells.Parisi-Amon, Andreina; Mulyasasmita, Widya; Chung, Cindy; Heilshorn, Sarah CAdvanced healthcare materials2013 Mar428-3223184882
Highly active zinc-finger nucleases by extended modular assembly.Bhakta, Mital S; Henry, Isabelle M; Ousterout, David G; Das, Kumitaa Theva; Lockwood, Sarah H; Meckler, Joshua F; Wallen, Mark C; Zykovich, Artem; Yu, Yawei; Leo, Heather; Xu, Lifeng; Gersbach, Charles A; Segal, David JGenome research2013 Mar530-823222846
A high-throughput assay for phosphoprotein-specific phosphatase activity in cellular extracts.Bose, Anjun K; Janes, Kevin AMolecular & cellular proteomics : MCP2013 Mar797-80623233447
Vertically stacked multi-heterostructures of layered materials for logic transistors and complementary inverters.Yu, Woo Jong; Li, Zheng; Zhou, Hailong; Chen, Yu; Wang, Yang; Huang, Yu; Duan, XiangfengNature materials2013 Mar246-5223241535
The conserved PHD1-PHD2 domain of ZFP-1/AF10 is a discrete functional module essential for viability in Caenorhabditis elegans.Avgousti, Daphne C; Cecere, Germano; Grishok, AllaMolecular and cellular biology2013 Mar999-101523263989
Mechanically induced intercellular calcium communication in confined endothelial structures.Junkin, Michael; Lu, Yi; Long, Juexuan; Deymier, Pierre A; Hoying, James B; Wong, Pak KinBiomaterials2013 Mar2049-5623267827
Reconfiguring the architectures of cationic helical polypeptides to control non-viral gene delivery.Yin, Lichen; Song, Ziyuan; Kim, Kyung Hoon; Zheng, Nan; Tang, Haoyu; Lu, Hua; Gabrielson, Nathan; Cheng, JianjunBiomaterials2013 Mar2340-923283350
A genome-scale RNA interference screen implicates NF1 loss in resistance to RAF inhibition.Whittaker, Steven R; Theurillat, Jean-Philippe; Van Allen, Eliezer; Wagle, Nikhil; Hsiao, Jessica; Cowley, Glenn S; Schadendorf, Dirk; Root, David E; Garraway, Levi ACancer discovery2013 Mar350-6223288408
Microfluidic validation of diagnostic protein markers for spontaneous cerebrospinal fluid rhinorrhea.Apori, Akwasi A; Brozynski, Martina N; El-Sayed, Ivan H; Herr, Amy EJournal of proteome research2013 Mar 11254-6523343621
GOLPH3L antagonizes GOLPH3 to determine Golgi morphology.Ng, Michelle M; Dippold, Holly C; Buschman, Matthew D; Noakes, Christopher J; Field, Seth JMolecular biology of the cell2013 Mar796-80823345592
Treadmill exercise induces age-related changes in aversive memory, neuroinflammatory and epigenetic processes in the rat hippocampus.Lovatel, Gisele Agustini; Elsner, Viviane Rostirola; Bertoldi, Karine; Vanzella, Claudia; Moyses, Felipe Dos Santos; Vizuete, Adriana; Spindler, Christiano; Cechinel, Laura Reck; Netto, Carlos Alexandre; Muotri, Alysson Renato; Siqueira, Ionara RodriguesNeurobiology of learning and memory2013 Mar94-10223357282
RNA-guided editing of bacterial genomes using CRISPR-Cas systems.Jiang, Wenyan; Bikard, David; Cox, David; Zhang, Feng; Marraffini, Luciano ANature biotechnology2013 Mar233-923360965
Synergistic and tunable human gene activation by combinations of synthetic transcription factors.Perez-Pinera, Pablo; Ousterout, David G; Brunger, Jonathan M; Farin, Alicia M; Glass, Katherine A; Guilak, Farshid; Crawford, Gregory E; Hartemink, Alexander J; Gersbach, Charles ANature methods2013 Mar239-4223377379
Single-chromosome transcriptional profiling reveals chromosomal gene expression regulation.Levesque, Marshall J; Raj, ArjunNature methods2013 Mar246-823416756
Fabrication and Characterization of Three-Dimensional Macroscopic All-Carbon Scaffolds.Lalwani, Gaurav; Kwaczala, Andrea Trinward; Kanakia, Shruti; Patel, Sunny C; Judex, Stefan; Sitharaman, BalajiCarbon2013 Mar 190-10023436939
Trehalose biosynthesis promotes Pseudomonas aeruginosa pathogenicity in plants.Djonovic, Slavica; Urbach, Jonathan M; Drenkard, Eliana; Bush, Jenifer; Feinbaum, Rhonda; Ausubel, Jonathan L; Traficante, David; Risech, Martina; Kocks, Christine; Fischbach, Michael A; Priebe, Gregory P; Ausubel, Frederick MPLoS pathogens2013 Mare100321723505373
Second harmonic generation reveals matrix alterations during breast tumor progression.Burke, Kathleen; Tang, Ping; Brown, EdwardJournal of biomedical optics2013 Mar03110623520654
Bayesian estimation of mixture models with prespecified elements to compare drug resistance in treatment-naive and experienced tuberculosis cases.Izu, Alane; Cohen, Ted; Degruttola, VictorPLoS computational biology2013 Mare100297323555210
Bioorthogonal profiling of protein methylation (BPPM) using an azido analog of S-adenosyl-L-methionine.Blum, Gil; Islam, Kabirul; Luo, MinkuiCurrent protocols in chemical biology2013 Mar 145-6623667794
Using Azido Analogue of S-Adenosyl-L-methionine for Bioorthogonal Profiling of Protein Methylation (BPPM).Blum, Gil; Islam, Kabirul; Luo, MinkuiCurrent protocols in chemical biology2013 Mar45-6623667794
Profiling protein methylation with cofactor analog containing terminal alkyne functionality.Blum, Gil; Bothwell, Ian R; Islam, Kabirul; Luo, MinkuiCurrent protocols in chemical biology2013 Mar 167-8823788324
From molecules to mastication: the development and evolution of teeth.Jheon, Andrew H; Seidel, Kerstin; Biehs, Brian; Klein, Ophir DWiley interdisciplinary reviews. Developmental biology2013 Mar165-8224009032
Wide-field optical detection of nanoparticles using on-chip microscopy and self-assembled nanolenses.Mudanyali, Onur; McLeod, Euan; Luo, Wei; Greenbaum, Alon; Coskun, Ahmet F; Hennequin, Yves; Allier, Cedric P; Ozcan, AydoganNature photonics2013 Mar 1NULL24358054
Intelligent Systems and Technology for Integrative and Predictive Medicine: An ACP Approach.Wang, Fei-Yue; Wong, Pak KinACM transactions on intelligent systems and technology2013 Mar 13224883228
Microfluidic screening of electrophoretic mobility shifts elucidates riboswitch binding function.Karns, Kelly; Vogan, Jacob M; Qin, Qian; Hickey, Scott F; Wilson, Stephen C; Hammond, Ming C; Herr, Amy EJournal of the American Chemical Society2013 Feb 273136-4323343213
Nuclease-resistant DNA via high-density packing in polymeric micellar nanoparticle coronas.Rush, Anthony M; Thompson, Matthew P; Tatro, Erick T; Gianneschi, Nathan CACS nano2013 Feb 261379-8723379679
Long noncoding RNAs regulate adipogenesis.Sun, Lei; Goff, Loyal A; Trapnell, Cole; Alexander, Ryan; Lo, Kinyui Alice; Hacisuleyman, Ezgi; Sauvageau, Martin; Tazon-Vega, Barbara; Kelley, David R; Hendrickson, David G; Yuan, Bingbing; Kellis, Manolis; Lodish, Harvey F; Rinn, John LProceedings of the National Academy of Sciences of the United States of America2013 Feb 263387-9223401553
Microfluidic investigation of BDNF-enhanced neural stem cell chemotaxis in CXCL12 gradients.Xu, Hui; Heilshorn, Sarah CSmall (Weinheim an der Bergstrasse, Germany)2013 Feb 25585-9523109183
Highly recurrent TERT promoter mutations in human melanoma.Huang, Franklin W; Hodis, Eran; Xu, Mary Jue; Kryukov, Gregory V; Chin, Lynda; Garraway, Levi AScience (New York, N.Y.)2013 Feb 22957-923348506
A personalized food allergen testing platform on a cellphone.Coskun, Ahmet F; Wong, Justin; Khodadadi, Delaram; Nagi, Richie; Tey, Andrew; Ozcan, AydoganLab on a chip2013 Feb 21636-4023254910
Probing circulating tumor cells in microfluidics.Li, Peng; Stratton, Zackary S; Dao, Ming; Ritz, Jerome; Huang, Tony JunLab on a chip2013 Feb 21602-923306378
Liver-derived systemic factors drive ýý cell hyperplasia in insulin-resistant states.El Ouaamari, Abdelfattah; Kawamori, Dan; Dirice, Ercument; Liew, Chong Wee; Shadrach, Jennifer L; Hu, Jiang; Katsuta, Hitoshi; Hollister-Lock, Jennifer; Qian, Wei-Jun; Wagers, Amy J; Kulkarni, Rohit NCell reports2013 Feb 21401-1023375376
YihE kinase is a central regulator of programmed cell death in bacteria.Dorsey-Oresto, Angella; Lu, Tao; Mosel, Michael; Wang, Xiuhong; Salz, Tal; Drlica, Karl; Zhao, XilinCell reports2013 Feb 21528-3723416055
Multiplex genome engineering using CRISPR/Cas systems.Cong, Le; Ran, F Ann; Cox, David; Lin, Shuailiang; Barretto, Robert; Habib, Naomi; Hsu, Patrick D; Wu, Xuebing; Jiang, Wenyan; Marraffini, Luciano A; Zhang, FengScience (New York, N.Y.)2013 Feb 15819-2323287718
Of fish and men: clonal lineage analysis identifies divergence in myocardial development.Sharma, Arun; Wu, Sean MCirculation research2013 Feb 15583-523410876
Modeling recent human evolution in mice by expression of a selected EDAR variant.Kamberov, Yana G; Wang, Sijia; Tan, Jingze; Gerbault, Pascale; Wark, Abigail; Tan, Longzhi; Yang, Yajun; Li, Shilin; Tang, Kun; Chen, Hua; Powell, Adam; Itan, Yuval; Fuller, Dorian; Lohmueller, Jason; Mao, Junhao; Schachar, Asa; Paymer, Madeline; HostetteCell2013 Feb 14691-70223415220
Identifying recent adaptations in large-scale genomic data.Grossman, Sharon R; Andersen, Kristian G; Shlyakhter, Ilya; Tabrizi, Shervin; Winnicki, Sarah; Yen, Angela; Park, Daniel J; Griesemer, Dustin; Karlsson, Elinor K; Wong, Sunny H; Cabili, Moran; Adegbola, Richard A; Bamezai, Rameshwar N K; Hill, Adrian V S;Cell2013 Feb 14703-1323415221
Dyeing to learn more about the gut microbiota.Donia, Mohamed S; Fischbach, Michael ACell host & microbe2013 Feb 13119-2023414750
Human cortical sensorimotor network underlying feedback control of vocal pitch.Chang, Edward F; Niziolek, Caroline A; Knight, Robert T; Nagarajan, Srikantan S; Houde, John FProceedings of the National Academy of Sciences of the United States of America2013 Feb 122653-823345447
Tunable, pulsatile chemical gradient generation via acoustically driven oscillating bubbles.Ahmed, Daniel; Chan, Chung Yu; Lin, Sz-Chin Steven; Muddana, Hari S; Nama, Nitesh; Benkovic, Stephen J; Huang, Tony JunLab on a chip2013 Feb 7328-3123254861
Cotranslational response to proteotoxic stress by elongation pausing of ribosomes.Liu, Botao; Han, Yan; Qian, Shu-BingMolecular cell2013 Feb 7453-6323290916
Fibroblasts influence muscle progenitor differentiation and alignment in contact independent and dependent manners in organized co-culture devices.Rao, Nikhil; Evans, Samantha; Stewart, Danique; Spencer, Katrina H; Sheikh, Farah; Hui, Elliot E; Christman, Karen LBiomedical microdevices2013 Feb161-922983793
Sacrificial layer technique for axial force post assay of immature cardiomyocytes.Taylor, Rebecca E; Kim, Keekyoung; Sun, Ning; Park, Sung-Jin; Sim, Joo Yong; Fajardo, Giovanni; Bernstein, Daniel; Wu, Joseph C; Pruitt, Beth LBiomedical microdevices2013 Feb171-8123007494
Spatiotemporal clustering of the epigenome reveals rules of dynamic gene regulation.Yu, Pengfei; Xiao, Shu; Xin, Xiaoyun; Song, Chun-Xiao; Huang, Wei; McDee, Darina; Tanaka, Tetsuya; Wang, Ting; He, Chuan; Zhong, ShengGenome research2013 Feb352-6423033340
iPS cell modeling of cardiometabolic diseases.Nakamura, Kenta; Hirano, Ken-ichi; Wu, Sean MJournal of cardiovascular translational research2013 Feb46-5323070616
Stuck in the middle: structural insights into the role of the gH/gL heterodimer in herpesvirus entry.Stampfer, Samuel D; Heldwein, Ekaterina ECurrent opinion in virology2013 Feb13-923107819
Functional genomic analysis of chromosomal aberrations in a compendium of 8000 cancer genomes.Kim, Tae-Min; Xi, Ruibin; Luquette, Lovelace J; Park, Richard W; Johnson, Mark D; Park, Peter JGenome research2013 Feb217-2723132910
MicroRNA-302 increases reprogramming efficiency via repression of NR2F2.Hu, Shijun; Wilson, Kitchener D; Ghosh, Zhumur; Han, Leng; Wang, Yongming; Lan, Feng; Ransohoff, Katherine J; Burridge, Paul; Wu, Joseph CStem cells (Dayton, Ohio)2013 Feb259-6823136034
Exercise induces age-dependent changes on epigenetic parameters in rat hippocampus: a preliminary study.Elsner, Viviane Rostirola; Lovatel, Gisele Agustini; Moyses, Felipe; Bertoldi, Karine; Spindler, Christiano; Cechinel, Laura Reck; Muotri, Alysson Renato; Siqueira, Ionara RodriguesExperimental gerontology2013 Feb136-923201423
Multistructural hot spot characterization with FTProd.Votapka, Lane; Amaro, Rommie EBioinformatics (Oxford, England)2013 Feb 1393-423202744
Identification of regulators of the innate immune response to cytosolic DNA and retroviral infection by an integrative approach.Lee, Mark N; Roy, Matthew; Ong, Shao-En; Mertins, Philipp; Villani, Alexandra-Chloe; Li, Weibo; Dotiwala, Farokh; Sen, Jayita; Doench, John G; Orzalli, Megan H; Kramnik, Igor; Knipe, David M; Lieberman, Judy; Carr, Steven A; Hacohen, NirNature immunology2013 Feb179-8523263557
In-source fragmentation and the sources of partially tryptic peptides in shotgun proteomics.Kim, Jong-Seo; Monroe, Matthew E; Camp 2nd, David G; Smith, Richard D; Qian, Wei-JunJournal of proteome research2013 Feb 1910-623268687
Molecular mechanisms of robustness in plants.Lempe, Janne; Lachowiec, Jennifer; Sullivan, Alessandra M; Queitsch, ChristineCurrent opinion in plant biology2013 Feb62-923279801
Chromatin proteins captured by ChIP-mass spectrometry are linked to dosage compensation in Drosophila.Wang, Charlotte I; Alekseyenko, Artyom A; LeRoy, Gary; Elia, Andrew E H; Gorchakov, Andrey A; Britton, Laura-Mae P; Elledge, Stephen J; Kharchenko, Peter V; Garcia, Benjamin A; Kuroda, Mitzi INature structural & molecular biology2013 Feb202-923295261
Stochastic profiling of transcriptional regulatory heterogeneities in tissues, tumors and cultured cells.Wang, Lixin; Janes, Kevin ANature protocols2013 Feb282-30123306461
SETD6 monomethylates H2AZ on lysine 7 and is required for the maintenance of embryonic stem cell self-renewal.Binda, Olivier; Sevilla, Ana; LeRoy, Gary; Lemischka, Ihor R; Garcia, Benjamin A; Richard, StephaneEpigenetics : official journal of the DNA Methylation Society2013 Feb177-8323324626
Peptidomics methods for the identification of peptidase-substrate interactions.Lone, Anna Mari; Kim, Yun-Gon; Saghatelian, AlanCurrent opinion in chemical biology2013 Feb83-923332665
Comprehending dynamic protein methylation with mass spectrometry.Afjehi-Sadat, Leila; Garcia, Benjamin ACurrent opinion in chemical biology2013 Feb12-923333572
Implications of temporal variation in maternal care for the prediction of neurobiological and behavioral outcomes in offspring.Jensen Pena, Catherine; Champagne, Frances ABehavioral neuroscience2013 Feb33-4623398440
Ambient mass spectrometry for the intraoperative molecular diagnosis of human brain tumors.Eberlin, Livia S; Norton, Isaiah; Orringer, Daniel; Dunn, Ian F; Liu, Xiaohui; Ide, Jennifer L; Jarmusch, Alan K; Ligon, Keith L; Jolesz, Ferenc A; Golby, Alexandra J; Santagata, Sandro; Agar, Nathalie Y R; Cooks, R GrahamProceedings of the National Academy of Sciences of the United States of America2013 Jan 291611-623300285
Biopsy with thermally-responsive untethered microtools.Gultepe, Evin; Randhawa, Jatinder S; Kadam, Sachin; Yamanaka, Sumitaka; Selaru, Florin M; Shin, Eun J; Kalloo, Anthony N; Gracias, David HAdvanced materials (Deerfield Beach, Fla.)2013 Jan 25514-923047708
Histone acetylation regulates intracellular pH.McBrian, Matthew A; Behbahan, Iman Saramipoor; Ferrari, Roberto; Su, Trent; Huang, Ta-Wei; Li, Kunwu; Hong, Candice S; Christofk, Heather R; Vogelauer, Maria; Seligson, David B; Kurdistani, Siavash KMolecular cell2013 Jan 24310-2123201122
Profiling genome-wide chromatin methylation with engineered posttranslation apparatus within living cells.Wang, Rui; Islam, Kabirul; Liu, Ying; Zheng, Weihong; Tang, Haiping; Lailler, Nathalie; Blum, Gil; Deng, Haiteng; Luo, MinkuiJournal of the American Chemical Society2013 Jan 231048-5623244065
Polymeric nucleic acid vehicles exploit active interorganelle trafficking mechanisms.Fichter, Katye M; Ingle, Nilesh P; McLendon, Patrick M; Reineke, Theresa MACS nano2013 Jan 22347-6423234474
Disruption of Escherichia coli amyloid-integrated biofilm formation at the air-liquid interface by a polysorbate surfactant.Wu, Cynthia; Lim, Ji Youn; Fuller, Gerald G; Cegelski, LynetteLangmuir : the ACS journal of surfaces and colloids2013 Jan 22920-623259693
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A droplet-based, optofluidic device for high-throughput, quantitative bioanalysis.Guo, Feng; Lapsley, Michael Ian; Nawaz, Ahmad Ahsan; Zhao, Yanhui; Lin, Sz-Chin Steven; Chen, Yuchao; Yang, Shikuan; Zhao, Xing-Zhong; Huang, Tony JunAnalytical chemistry2012 Dec 1810745-923140515
Aptamer-functionalized, ultra-small, monodisperse silica nanoconjugates for targeted dual-modal imaging of lymph nodes with metastatic tumors.Tang, Li; Yang, Xujuan; Dobrucki, Lawrence W; Chaudhury, Isthier; Yin, Qian; Yao, Catherine; Lezmi, Stephane; Helferich, William G; Fan, Timothy M; Cheng, JianjunAngewandte Chemie (International ed. in English)2012 Dec 1412721-623136130
Cell instructive microporous scaffolds through interface engineering.Viswanathan, Priyalakshmi; Chirasatitsin, Somyot; Ngamkham, Kamolchanok; Engler, Adam J; Battaglia, GiuseppeJournal of the American Chemical Society2012 Dec 1220103-923163574
Nanowire-mediated delivery enables functional interrogation of primary immune cells: application to the analysis of chronic lymphocytic leukemia.Shalek, Alex K; Gaublomme, Jellert T; Wang, Lili; Yosef, Nir; Chevrier, Nicolas; Andersen, Mette S; Robinson, Jacob T; Pochet, Nathalie; Neuberg, Donna; Gertner, Rona S; Amit, Ido; Brown, Jennifer R; Hacohen, Nir; Regev, Aviv; Wu, Catherine J; Park, HongkNano letters2012 Dec 126498-50423190424
In vivo directed differentiation of pluripotent stem cells for skeletal regeneration.Levi, Benjamin; Hyun, Jeong S; Montoro, Daniel T; Lo, David D; Chan, Charles K F; Hu, Shijun; Sun, Ning; Lee, Min; Grova, Monica; Connolly, Andrew J; Wu, Joseph C; Gurtner, Geoffrey C; Weissman, Irving L; Wan, Derrick C; Longaker, Michael TProceedings of the National Academy of Sciences of the United States of America2012 Dec 1120379-8423169671
Identification of Sox9-dependent acinar-to-ductal reprogramming as the principal mechanism for initiation of pancreatic ductal adenocarcinoma.Kopp, Janel L; von Figura, Guido; Mayes, Erin; Liu, Fen-Fen; Dubois, Claire L; Morris 4th, John P; Pan, Fong Cheng; Akiyama, Haruhiko; Wright, Christopher V E; Jensen, Kristin; Hebrok, Matthias; Sander, MaikeCancer cell2012 Dec 11737-5023201164
Spatiotemporal regulation of epithelial-mesenchymal transition is essential for squamous cell carcinoma metastasis.Tsai, Jeff H; Donaher, Joana Liu; Murphy, Danielle A; Chau, Sandra; Yang, JingCancer cell2012 Dec 11725-3623201165
Development in the STORM.Kamiyama, Daichi; Huang, BoDevelopmental cell2012 Dec 111103-1023237944
Tetrakis(hydroxymethyl) phosphonium chloride as a covalent cross-linking agent for cell encapsulation within protein-based hydrogels.Chung, Cindy; Lampe, Kyle J; Heilshorn, Sarah CBiomacromolecules2012 Dec 103912-623151175
Genome editing of human embryonic stem cells and induced pluripotent stem cells with zinc finger nucleases for cellular imaging.Wang, Yongming; Zhang, Wendy Y; Hu, Shijun; Lan, Feng; Lee, Andrew S; Huber, Bruno; Lisowski, Leszek; Liang, Ping; Huang, Mei; de Almeida, Patricia E; Won, Jong H; Sun, Ning; Robbins, Robert C; Kay, Mark A; Urnov, Fyodor D; Wu, Joseph CCirculation research2012 Dec 71494-50322967807
High-throughput screening of large volumes of whole blood using structured illumination and fluorescent on-chip imaging.Arpali, Serap Altay; Arpali, Caglar; Coskun, Ahmet F; Chiang, Hsin-Hao; Ozcan, AydoganLab on a chip2012 Dec 74968-7123047492
General protein diffusion barriers create compartments within bacterial cells.Schlimpert, Susan; Klein, Eric A; Briegel, Ariane; Hughes, Velocity; Kahnt, Jorg; Bolte, Kathrin; Maier, Uwe G; Brun, Yves V; Jensen, Grant J; Gitai, Zemer; Thanbichler, MartinCell2012 Dec 71270-8223201141
Targeting the cell wall of Mycobacterium tuberculosis: structure and mechanism of L,D-transpeptidase 2.Erdemli, Sabri B; Gupta, Radhika; Bishai, William R; Lamichhane, Gyanu; Amzel, L Mario; Bianchet, Mario AStructure (London, England : 1993)2012 Dec 52103-1523103390
Rapid fragmentation of neuronal networks at the onset of propofol-induced unconsciousness.Lewis, Laura D; Weiner, Veronica S; Mukamel, Eran A; Donoghue, Jacob A; Eskandar, Emad N; Madsen, Joseph R; Anderson, William S; Hochberg, Leigh R; Cash, Sydney S; Brown, Emery N; Purdon, Patrick LProceedings of the National Academy of Sciences of the United States of America2012 Dec 4E3377-8623129622
NMR solution structure and condition-dependent oligomerization of the antimicrobial peptide human defensin 5.Wommack, Andrew J; Robson, Scott A; Wanniarachchi, Yoshitha A; Wan, Andrea; Turner, Christopher J; Wagner, Gerhard; Nolan, Elizabeth MBiochemistry2012 Dec 49624-3723163963
Cystic fibrosis mutations for p.F508del compound heterozygotes predict sweat chloride levels and pancreatic sufficiency.Sebro, R; Levy, H; Schneck, K; Dimmock, D; Raby, B A; Cannon, C L; Broeckel, U; Risch, N JClinical genetics2012 Dec546-5122035343
Specific chemotaxis of magnetically labeled mesenchymal stem cells: implications for MRI of glioma.Bennewitz, Margaret F; Tang, Kevin S; Markakis, Eleni A; Shapiro, Erik MMolecular imaging and biology : MIB : the official publication of the Academy of Molecular Imaging2012 Dec676-8722418788
Engineering commensal bacteria for prophylaxis against infection.Goh, Yih-Lin; He, HongFei; March, John CCurrent opinion in biotechnology2012 Dec924-3022459613
Altered resting state functional brain network topology in chemotherapy-treated breast cancer survivors.Bruno, Jennifer; Hosseini, S M Hadi; Kesler, ShelliNeurobiology of disease2012 Dec329-3822820143
Transcriptional signatures as a disease-specific and predictive inflammatory biomarker for type 1 diabetes.Levy, H; Wang, X; Kaldunski, M; Jia, S; Kramer, J; Pavletich, S J; Reske, M; Gessel, T; Yassai, M; Quasney, M W; Dahmer, M K; Gorski, J; Hessner, M JGenes and immunity2012 Dec593-60422972474
A maternal high-fat diet modulates fetal SIRT1 histone and protein deacetylase activity in nonhuman primates.Suter, Melissa A; Chen, Aishe; Burdine, Marie S; Choudhury, Mahua; Harris, R Alan; Lane, Robert H; Friedman, Jacob E; Grove, Kevin L; Tackett, Alan J; Aagaard, Kjersti MFASEB journal : official publication of the Federation of American Societies for Experimental Biology2012 Dec5106-1422982377
The surprising diversity of Mycobacterium tuberculosis: change you can believe in.Fortune, Sarah MThe Journal of infectious diseases2012 Dec 11642-422984117
Regulation of Drosophila mesoderm migration by phosphoinositides and the PH domain of the Rho GTP exchange factor Pebble.Murray, Michael J; Ng, Michelle M; Fraval, Hamilton; Tan, Julie; Liu, Wenjie; Smallhorn, Masha; Brill, Julie A; Field, Seth J; Saint, RobertDevelopmental biology2012 Dec 117-2723000359
Noninvasive determination of 2-[18F]-fluoroisonicotinic acid hydrazide pharmacokinetics by positron emission tomography in Mycobacterium tuberculosis-infected mice.Weinstein, E A; Liu, L; Ordonez, A A; Wang, H; Hooker, J M; Tonge, P J; Jain, S KAntimicrobial agents and chemotherapy2012 Dec6284-9023006755
Maternal high-fat diet modulates the fetal thyroid axis and thyroid gene expression in a nonhuman primate model.Suter, Melissa A; Sangi-Haghpeykar, Haleh; Showalter, Lori; Shope, Cynthia; Hu, Min; Brown, Kathleen; Williams, Sarah; Harris, R Alan; Grove, Kevin L; Lane, Robert H; Aagaard, Kjersti MMolecular endocrinology (Baltimore, Md.)2012 Dec2071-8023015752
The nuclear receptor TLX is required for gliomagenesis within the adult neurogenic niche.Zou, Yuhua; Niu, Wenze; Qin, Song; Downes, Michael; Burns, Dennis K; Zhang, Chun-LiMolecular and cellular biology2012 Dec4811-2023028043
New emerging roles for epithelial cell extrusion.Gu, Yapeng; Rosenblatt, JodyCurrent opinion in cell biology2012 Dec865-7023044222
Engineered, harnessed, and hijacked: synthetic uses for cytoskeletal systems.Goodman, Brian S; Derr, Nathan D; Reck-Peterson, Samara LTrends in cell biology2012 Dec644-5223059001
Cardiac structural and sarcomere genes associated with cardiomyopathy exhibit marked intolerance of genetic variation.Pan, Stephen; Caleshu, Colleen A; Dunn, Kyla E; Foti, Marcia J; Moran, Maura K; Soyinka, Oretunlewa; Ashley, Euan ACirculation. Cardiovascular genetics2012 Dec602-1023074333
Divergent allosteric control of the IRE1ýý endoribonuclease using kinase inhibitors.Wang, Likun; Perera, B Gayani K; Hari, Sanjay B; Bhhatarai, Barun; Backes, Bradley J; Seeliger, Markus A; Schurer, Stephan C; Oakes, Scott A; Papa, Feroz R; Maly, Dustin JNature chemical biology2012 Dec982-923086298
Twist1 mediates repression of chondrogenesis by ýý-catenin to promote cranial bone progenitor specification.Goodnough, L Henry; Chang, Andrew T; Treloar, Charles; Yang, Jing; Scacheri, Peter C; Atit, Radhika PDevelopment (Cambridge, England)2012 Dec 14428-3823095887
Inhibition of RNA lariat debranching enzyme suppresses TDP-43 toxicity in ALS disease models.Armakola, Maria; Higgins, Matthew J; Figley, Matthew D; Barmada, Sami J; Scarborough, Emily A; Diaz, Zamia; Fang, Xiaodong; Shorter, James; Krogan, Nevan J; Finkbeiner, Steven; Farese Jr, Robert V; Gitler, Aaron DNature genetics2012 Dec1302-923104007
Microtubule-based transport in filamentous fungi.Egan, Martin J; McClintock, Mark A; Reck-Peterson, Samara LCurrent opinion in microbiology2012 Dec637-4523127389
Pluripotency in 3D: genome organization in pluripotent cells.Denholtz, Matthew; Plath, KathrinCurrent opinion in cell biology2012 Dec793-80123199754
Metabolomics strategy reveals subpopulation of liposarcomas sensitive to gemcitabine treatment.Braas, Daniel; Ahler, Ethan; Tam, Brenna; Nathanson, David; Riedinger, Mirielle; Benz, Matthias R; Smith, Kathleen B; Eilber, Fritz C; Witte, Owen N; Tap, William D; Wu, Hong; Christofk, Heather RCancer discovery2012 Dec1109-1723230188
Lens-free computational imaging of capillary morphogenesis within three-dimensional substrates.Weidling, John; Isikman, Serhan O; Greenbaum, Alon; Ozcan, Aydogan; Botvinick, ElliotJournal of biomedical optics2012 Dec12601823235893
Epigenetic influence of stress and the social environment.Gudsnuk, Kathryn; Champagne, Frances AILAR journal / National Research Council, Institute of Laboratory Animal Resources2012 Dec279-8823744967
Early origins of adult disease: approaches for investigating the programmable epigenome in humans, nonhuman primates, and rodents.Ganu, Radhika S; Harris, R Alan; Collins, Kiara; Aagaard, Kjersti MILAR journal / National Research Council, Institute of Laboratory Animal Resources2012 Dec306-2123744969
Polymeric Nanomedicines Based on Poly(lactide) and Poly(lactide-co-glycolide).Tong, Rong; Gabrielson, Nathan P; Fan, Timothy M; Cheng, JianjunCurrent opinion in solid state & materials science2012 Dec 1323-33223914135
Three-dimensional structures self-assembled from DNA bricks.Ke, Yonggang; Ong, Luvena L; Shih, William M; Yin, PengScience (New York, N.Y.)2012 Nov 301177-8323197527
Medical documentation in the electronic era.Wang, C JasonJAMA : the journal of the American Medical Association2012 Nov 282091-223188023
Label-free polypeptide-based enzyme detection using a graphene-nanoparticle hybrid sensor.Myung, Sung; Yin, Perry T; Kim, Cheoljin; Park, Jaesung; Solanki, Aniruddh; Reyes, Pavel Ivanoff; Lu, Yicheng; Kim, Kwang S; Lee, Ki-BumAdvanced materials (Deerfield Beach, Fla.)2012 Nov 276081-722961629
Catalytic control of enzymatic fluorine specificity.Weeks, Amy M; Chang, Michelle C YProceedings of the National Academy of Sciences of the United States of America2012 Nov 2719667-7223150553
Macromolecular Imaging Agents Containing Lanthanides: Can Conceptual Promise Lead to Clinical Potential?Bryson, Joshua; Reineke, Jeffrey W; Reineke, Theresa MMacromolecules2012 Nov 278939-895223467737
Electrokinetic focusing and separation of mammalian cells in conductive biological fluids.Gao, Jian; Riahi, Reza; Sin, Mandy L Y; Zhang, Shufeng; Wong, Pak KinThe Analyst2012 Nov 215215-2122937529
Adaptation to a new environment allows cooperators to purge cheaters stochastically.Waite, Adam James; Shou, WenyingProceedings of the National Academy of Sciences of the United States of America2012 Nov 2019079-8623091010
Plasmodium falciparum responds to amino acid starvation by entering into a hibernatory state.Babbitt, Shalon E; Altenhofen, Lindsey; Cobbold, Simon A; Istvan, Eva S; Fennell, Clare; Doerig, Christian; Llinas, Manuel; Goldberg, Daniel EProceedings of the National Academy of Sciences of the United States of America2012 Nov 20E3278-8723112171
Patient specific proteolytic activity of monocyte-derived macrophages and osteoclasts predicted with temporal kinase activation states during differentiation.Park, Keon-Young; Li, Weiwei A; Platt, Manu OIntegrative biology : quantitative biosciences from nano to macro2012 Nov 191459-6923114878
Graphene: an emerging electronic material.Weiss, Nathan O; Zhou, Hailong; Liao, Lei; Liu, Yuan; Jiang, Shan; Huang, Yu; Duan, XiangfengAdvanced materials (Deerfield Beach, Fla.)2012 Nov 145782-82522930422
Facile functionalization of polyesters through thiol-yne chemistry for the design of degradable, cell-penetrating and gene delivery dual-functional agents.Zhang, Zhonghai; Yin, Lichen; Xu, Yunxiang; Tong, Rong; Lu, Yanbing; Ren, Jie; Cheng, JianjunBiomacromolecules2012 Nov 123456-6223098261
The p23 molecular chaperone and GCN5 acetylase jointly modulate protein-DNA dynamics and open chromatin status.Zelin, Elena; Zhang, Yang; Toogun, Oyetunji A; Zhong, Sheng; Freeman, Brian CMolecular cell2012 Nov 9459-7023022381
IRE1ýý cleaves select microRNAs during ER stress to derepress translation of proapoptotic Caspase-2.Upton, John-Paul; Wang, Likun; Han, Dan; Wang, Eric S; Huskey, Noelle E; Lim, Lionel; Truitt, Morgan; McManus, Michael T; Ruggero, Davide; Goga, Andrei; Papa, Feroz R; Oakes, Scott AScience (New York, N.Y.)2012 Nov 9818-2223042294
Epidemiology. Emerging disease or diagnosis?Gire, Stephen K; Stremlau, Matthew; Andersen, Kristian G; Schaffner, Stephen F; Bjornson, Zach; Rubins, Kathleen; Hensley, Lisa; McCormick, Joseph B; Lander, Eric S; Garry, Robert F; Happi, Christian; Sabeti, Pardis CScience (New York, N.Y.)2012 Nov 9750-223139320
Operational plasticity enables hsp104 to disaggregate diverse amyloid and nonamyloid clients.DeSantis, Morgan E; Leung, Eunice H; Sweeny, Elizabeth A; Jackrel, Meredith E; Cushman-Nick, Mimi; Neuhaus-Follini, Alexandra; Vashist, Shilpa; Sochor, Matthew A; Knight, M Noelle; Shorter, JamesCell2012 Nov 9778-9323141537
Microwell devices with finger-like channels for long-term imaging of HIV-1 expression kinetics in primary human lymphocytes.Razooky, Brandon S; Gutierrez, Edgar; Terry, Valeri H; Spina, Celsa A; Groisman, Alex; Weinberger, Leor SLab on a chip2012 Nov 74305-1222976503
POT1-TPP1 regulates telomeric overhang structural dynamics.Hwang, Helen; Buncher, Noah; Opresko, Patricia L; Myong, SuaStructure (London, England : 1993)2012 Nov 71872-8022981946
Standing surface acoustic wave (SSAW) based multichannel cell sorting.Ding, Xiaoyun; Lin, Sz-Chin Steven; Lapsley, Michael Ian; Li, Sixing; Guo, Xiang; Chan, Chung Yu; Chiang, I-Kao; Wang, Lin; McCoy, J Philip; Huang, Tony JunLab on a chip2012 Nov 74228-3122992833
In vitro optimization of EtNBS-PDT against hypoxic tumor environments with a tiered, high-content, 3D model optical screening platform.Klein, Oliver J; Bhayana, Brijesh; Park, Yong Jin; Evans, Conor LMolecular pharmaceutics2012 Nov 53171-8222946843
Fabrication and characterization of beaded SiC quantum rings with anomalous red spectral shift.Yang, Shikuan; Kiraly, Brian; Wang, William Yi; Shang, Shunli; Cao, Bingqiang; Zeng, Haibo; Zhao, Yanhui; Li, Weizhou; Liu, Zi-Kui; Cai, Weiping; Huang, Tony JunAdvanced materials (Deerfield Beach, Fla.)2012 Nov 25598-60322911493
Tug-of-war in motor protein ensembles revealed with a programmable DNA origami scaffold.Derr, N D; Goodman, B S; Jungmann, R; Leschziner, A E; Shih, W M; Reck-Peterson, S LScience (New York, N.Y.)2012 Nov 2662-523065903
Evidence for individual differences in regulatory focus in rats, Rattus norvegicus.Franks, Becca; Higgins, E Tory; Champagne, Frances AJournal of comparative psychology (Washington, D.C. : 1983)2012 Nov347-5422390620
Self-folding polymeric containers for encapsulation and delivery of drugs.Fernandes, Rohan; Gracias, David HAdvanced drug delivery reviews2012 Nov1579-8922425612
Multiscale models of cell signaling.Bajikar, Sameer S; Janes, Kevin AAnnals of biomedical engineering2012 Nov2319-2722476894
Metformin targets ovarian cancer stem cells in vitro and in vivo.Shank, Jessica J; Yang, Kun; Ghannam, Jacob; Cabrera, Lourdes; Johnston, Carolyn J; Reynolds, R Kevin; Buckanovich, Ronald JGynecologic oncology2012 Nov390-722864111
Association of cystic fibrosis transmembrane conductance regulator gene variants with acute lung injury in African American children with pneumonia*.Baughn, Julie M; Quasney, Michael W; Simpson, Pippa; Merchant, Daniel; Li, Shun-Hwa; Levy, Hara; Dahmer, Mary KCritical care medicine2012 Nov3042-922890249
Role of Kruppel-like factor 4 in neurogenesis and radial neuronal migration in the developing cerebral cortex.Qin, Song; Zhang, Chun-LiMolecular and cellular biology2012 Nov4297-30522907754
TGFýý signaling: its role in fibrosis formation and myopathies.MacDonald, Elizabeth M; Cohn, Ronald DCurrent opinion in rheumatology2012 Nov628-3422918531
Inhibitors of reactive oxygen species accumulation delay and/or reduce the lethality of several antistaphylococcal agents.Liu, Yuanli; Liu, Xinghan; Qu, Yilin; Wang, Xiuhong; Li, Liping; Zhao, XilinAntimicrobial agents and chemotherapy2012 Nov6048-5022948880
Rho GTPases in animal cell cytokinesis: an occupation by the one percent.Jordan, Shawn N; Canman, Julie CCytoskeleton (Hoboken, N.J.)2012 Nov919-3023047851
Linking prenatal maternal adversity to developmental outcomes in infants: the role of epigenetic pathways.Monk, Catherine; Spicer, Julie; Champagne, Frances ADevelopment and psychopathology2012 Nov1361-7623062303
Magnetic nanoparticle-mediated massively parallel mechanical modulation of single-cell behavior.Tseng, Peter; Judy, Jack W; Di Carlo, DinoNature methods2012 Nov1113-923064517
An integrated map of genetic variation from 1,092 human genomes.1000 Genomes Project Consortium; Abecasis, Goncalo R; Auton, Adam; Brooks, Lisa D; DePristo, Mark A; Durbin, Richard M; Handsaker, Robert E; Kang, Hyun Min; Marth, Gabor T; McVean, Gil ANature2012 Nov 156-6523128226
The expanding scope of DNA sequencing.Shendure, Jay; Lieberman Aiden, ErezNature biotechnology2012 Nov1084-9423138308
Protein-engineered biomaterials to generate human skeletal muscle mimics.Sengupta, Debanti; Gilbert, Penney M; Johnson, Kyle J; Blau, Helen M; Heilshorn, Sarah CAdvanced healthcare materials2012 Nov785-923184832
Nanoparticle location and material dependent dose enhancement in X-ray radiation therapy.Hossain, Mainul; Su, MingThe journal of physical chemistry. C, Nanomaterials and interfaces2012 Nov 123047-2305223393610
Calcium ion gradients modulate the zinc affinity and antibacterial activity of human calprotectin.Brophy, Megan Brunjes; Hayden, Joshua A; Nolan, Elizabeth MJournal of the American Chemical Society2012 Oct 3118089-10023082970
BapE DNA endonuclease induces an apoptotic-like response to DNA damage in Caulobacter.Bos, Julia; Yakhnina, Anastasiya A; Gitai, ZemerProceedings of the National Academy of Sciences of the United States of America2012 Oct 3018096-10123074244
Chemistry with spatial control using particles and streams().Kalinin, Yevgeniy V; Murali, Adithya; Gracias, David HRSC advances2012 Oct 289707-972623145348
Assessing spatial heterogeneity of MDR-TB in a high burden country.Jenkins, Helen E; Plesca, Valeriu; Ciobanu, Anisoara; Crudu, Valeriu; Galusca, Irina; Soltan, Viorel; Serbulenco, Aliona; Zignol, Matteo; Dadu, Andrei; Dara, Masoud; Cohen, TedThe European respiratory journal : official journal of the European Society for Clinical Respiratory Physiology2012 Oct 2523100496
Bistable isoelectric point photoswitching in green fluorescent proteins observed by dynamic immunoprobed isoelectric focusing.Hughes, Alex J; Tentori, Augusto M; Herr, Amy EJournal of the American Chemical Society2012 Oct 2417582-9123017083
Cerebral Stimulation for the Affective Component of Neuropathic Pain.Machado, Andre G; Baker, Kenneth B; Plow, Ela; Malone, Donald ANeuromodulation : journal of the International Neuromodulation Society2012 Oct 2423094938
Transcriptional burst frequency and burst size are equally modulated across the human genome.Dar, Roy D; Razooky, Brandon S; Singh, Abhyudai; Trimeloni, Thomas V; McCollum, James M; Cox, Chris D; Simpson, Michael L; Weinberger, Leor SProceedings of the National Academy of Sciences of the United States of America2012 Oct 2317454-923064634
Crowd-sourced BioGames: managing the big data problem for next-generation lab-on-a-chip platforms.Mavandadi, Sam; Dimitrov, Stoyan; Feng, Steve; Yu, Frank; Yu, Richard; Sikora, Uzair; Ozcan, AydoganLab on a chip2012 Oct 214102-622918378
Exploiting mechanical biomarkers in microfluidics.Mao, Xiaole; Huang, Tony JunLab on a chip2012 Oct 214006-922968689
Hydrogel crosslinking density regulates temporal contractility of human embryonic stem cell-derived cardiomyocytes in 3D cultures.Chung, Cindy; Anderson, Erica; Pera, Renee Reijo; Pruitt, Beth L; Heilshorn, Sarah CSoft matter2012 Oct 2110141-1014823226161
Selective penicillin-binding protein imaging probes reveal substructure in bacterial cell division.Kocaoglu, Ozden; Calvo, Rebecca A; Sham, Lok-To; Cozy, Loralyn M; Lanning, Bryan R; Francis, Samson; Winkler, Malcolm E; Kearns, Daniel B; Carlson, Erin EACS chemical biology2012 Oct 191746-5322909777
Nutrient-dependent structural changes in S. aureus peptidoglycan revealed by solid-state NMR spectroscopy.Zhou, Xiaoxue; Cegelski, LynetteBiochemistry2012 Oct 168143-5322974326
Paternal social enrichment effects on maternal behavior and offspring growth.Mashoodh, Rahia; Franks, Becca; Curley, James P; Champagne, Frances AProceedings of the National Academy of Sciences of the United States of America2012 Oct 1617232-823045657
Mechanism of fatty-acid-dependent UCP1 uncoupling in brown fat mitochondria.Fedorenko, Andriy; Lishko, Polina V; Kirichok, YuriyCell2012 Oct 12400-1323063128
Light-inducible spatiotemporal control of gene activation by customizable zinc finger transcription factors.Polstein, Lauren R; Gersbach, Charles AJournal of the American Chemical Society2012 Oct 1016480-322963237
Programmed cell death: a new way worms get rid of unwanted cells.Rosenblatt, JodyCurrent biology : CB2012 Oct 9R844-623058805
Characterization of differential Toll-like receptor responses below the optical diffraction limit.Aaron, Jesse S; Carson, Bryan D; Timlin, Jerilyn ASmall (Weinheim an der Bergstrasse, Germany)2012 Oct 83041-922807232
Metabolomic signatures in guinea pigs infected with epidemic-associated W-Beijing strains of Mycobacterium tuberculosis.Somashekar, Bagganahalli S; Amin, Anita G; Tripathi, Pratima; MacKinnon, Neil; Rithner, Christopher D; Shanley, Crystal A; Basaraba, Randall; Henao-Tamayo, Marcela; Kato-Maeda, Midori; Ramamoorthy, Ayyalusamy; Orme, Ian M; Ordway, Diane J; Chatterjee, DelJournal of proteome research2012 Oct 54873-8422873951
CSR-1 RNAi pathway positively regulates histone expression in C. elegans.Avgousti, Daphne C; Palani, Santhosh; Sherman, Yekaterina; Grishok, AllaThe EMBO journal2012 Oct 33821-3222863779
High-throughput lensfree 3D tracking of human sperms reveals rare statistics of helical trajectories.Su, Ting-Wei; Xue, Liang; Ozcan, AydoganProceedings of the National Academy of Sciences of the United States of America2012 Oct 216018-2222988076
Stem cells and modeling of autism spectrum disorders.Freitas, Beatriz C G; Trujillo, Cleber A; Carromeu, Cassiano; Yusupova, Marianna; Herai, Roberto H; Muotri, Alysson RExperimental neurology2012 Oct 223036599
Induced pluripotent stem cells as a disease modeling and drug screening platform.Ebert, Antje D; Liang, Ping; Wu, Joseph CJournal of cardiovascular pharmacology2012 Oct408-1622240913
Informing brain connectivity with optogenetic functional magnetic resonance imaging.Lee, Jin HyungNeuroImage2012 Oct 12244-922326987
Chemoselective hydroxyl group transformation: an elusive target.Trader, Darci J; Carlson, Erin EMolecular bioSystems2012 Oct2484-9322695722
Modeling neurodevelopmental disorders using human neurons.Chailangkarn, Thanathom; Acab, Allan; Muotri, Alysson RenatoCurrent opinion in neurobiology2012 Oct785-9022717528
Injectable extracellular matrix derived hydrogel provides a platform for enhanced retention and delivery of a heparin-binding growth factor.Seif-Naraghi, Sonya B; Horn, Dinah; Schup-Magoffin, Pamela J; Christman, Karen LActa biomaterialia2012 Oct3695-70322750737
The alignment and fusion assembly of adipose-derived stem cells on mechanically patterned matrices.Choi, Yu Suk; Vincent, Ludovic G; Lee, Andrew R; Kretchmer, Kyle C; Chirasatitsin, Somyot; Dobke, Marek K; Engler, Adam JBiomaterials2012 Oct6943-5122800539
Mycobacterial shuttle vectors designed for high-level protein expression in infected macrophages.Eitson, Jennifer L; Medeiros, Jennifer J; Hoover, Ashley R; Srivastava, Shashikant; Roybal, Kole T; Ainsa, Jose A; Hansen, Eric J; Gumbo, Tawanda; van Oers, Nicolai S CApplied and environmental microbiology2012 Oct6829-3722820329
YAHA: fast and flexible long-read alignment with optimal breakpoint detection.Faust, Gregory G; Hall, Ira MBioinformatics (Oxford, England)2012 Oct 12417-2422829624
Alternative nuclear transport for cellular protein quality control.Rose, April; Schlieker, ChristianTrends in cell biology2012 Oct509-1422858153
Site-specific genome editing in Plasmodium falciparum using engineered zinc-finger nucleases.Straimer, Judith; Lee, Marcus C S; Lee, Andrew H; Zeitler, Bryan; Williams, April E; Pearl, Jocelynn R; Zhang, Lei; Rebar, Edward J; Gregory, Philip D; Llinas, Manuel; Urnov, Fyodor D; Fidock, David ANature methods2012 Oct993-822922501
Loss of tumor suppressor NF1 activates HSF1 to promote carcinogenesis.Dai, Chengkai; Santagata, Sandro; Tang, Zijian; Shi, Jiayuan; Cao, Junxia; Kwon, Hyoungtae; Bronson, Roderick T; Whitesell, Luke; Lindquist, SusanThe Journal of clinical investigation2012 Oct 13742-5422945628
Submicrometre geometrically encoded fluorescent barcodes self-assembled from DNA.Lin, Chenxiang; Jungmann, Ralf; Leifer, Andrew M; Li, Chao; Levner, Daniel; Church, George M; Shih, William M; Yin, PengNature chemistry2012 Oct832-923000997
Pushing the reset button: chemical-induced conversion of amniotic fluid stem cells into a pluripotent state.Diecke, Sebastian; Wu, Joseph CMolecular therapy : the journal of the American Society of Gene Therapy2012 Oct1839-4123023056
Mixed-strain mycobacterium tuberculosis infections and the implications for tuberculosis treatment and control.Cohen, Ted; van Helden, Paul D; Wilson, Douglas; Colijn, Caroline; McLaughlin, Megan M; Abubakar, Ibrahim; Warren, Robin MClinical microbiology reviews2012 Oct708-1923034327
Resiliency of lung cancers to EGFR inhibitor treatment unveiled, offering opportunities to divide and conquer EGFR inhibitor resistance.Blakely, Collin M; Bivona, Trever GCancer discovery2012 Oct872-523071030
Computational chemistry and drug discovery: a call to action.Jansen, Johanna M; Amaro, Rommie E; Cornell, Wendy; Tseng, Y Jane; Walters, W PatrickFuture medicinal chemistry2012 Oct1893-623088271
BioGames: A Platform for Crowd-Sourced Biomedical Image Analysis and Telediagnosis.Mavandadi, Sam; Feng, Steve; Yu, Frank; Dimitrov, Stoyan; Yu, Richard; Ozcan, AydoganGames for health journal2012 Oct 1373-37623724363
Asymmetrically modified nucleosomes.Voigt, Philipp; LeRoy, Gary; Drury 3rd, William J; Zee, Barry M; Son, Jinsook; Beck, David B; Young, Nicolas L; Garcia, Benjamin A; Reinberg, DannyCell2012 Sep 28181-9323021224
Biocompatible polymeric nanoparticles degrade and release cargo in response to biologically relevant levels of hydrogen peroxide.de Gracia Lux, Caroline; Joshi-Barr, Shivanjali; Nguyen, Trung; Mahmoud, Enas; Schopf, Eric; Fomina, Nadezda; Almutairi, AdahJournal of the American Chemical Society2012 Sep 2615758-6422946840
High-yield chemical vapor deposition growth of high-quality large-area AB-stacked bilayer graphene.Liu, Lixin; Zhou, Hailong; Cheng, Rui; Yu, Woo Jong; Liu, Yuan; Chen, Yu; Shaw, Jonathan; Zhong, Xing; Huang, Yu; Duan, XiangfengACS nano2012 Sep 258241-922906199
Increasing materials' response to two-photon NIR light via self-immolative dendritic scaffolds.Fomina, Nadezda; McFearin, Cathryn L; Almutairi, AdahChemical communications (Cambridge, England)2012 Sep 219138-4022475792
A multichannel dampened flow system for studies on shear stress-mediated mechanotransduction.Voyvodic, Peter L; Min, Daniel; Baker, Aaron BLab on a chip2012 Sep 213322-3022836694
Structural basis for microtubule binding and release by dynein.Redwine, William B; Hernandez-Lopez, Rogelio; Zou, Sirui; Huang, Julie; Reck-Peterson, Samara L; Leschziner, Andres EScience (New York, N.Y.)2012 Sep 211532-622997337
Iron oxide nanoparticle-based magnetic resonance method to monitor release kinetics from polymeric particles with high resolution.Chan, Minnie; Schopf, Eric; Sankaranarayanan, Jagadis; Almutairi, AdahAnalytical chemistry2012 Sep 187779-8422891894
Chaperone probes and bead-based enhancement to improve the direct detection of mRNA using silicon photonic sensor arrays.Kindt, Jared T; Bailey, Ryan CAnalytical chemistry2012 Sep 188067-7422913333
Antibody-free, targeted mass-spectrometric approach for quantification of proteins at low picogram per milliliter levels in human plasma/serum.Shi, Tujin; Fillmore, Thomas L; Sun, Xuefei; Zhao, Rui; Schepmoes, Athena A; Hossain, Mahmud; Xie, Fang; Wu, Si; Kim, Jong-Seo; Jones, Nathan; Moore, Ronald J; Pasa-Tolic, Ljiljana; Kagan, Jacob; Rodland, Karin D; Liu, Tao; Tang, Keqi; Camp 2nd, David G; Proceedings of the National Academy of Sciences of the United States of America2012 Sep 1815395-40022949669
Identification of novel bioactive aldehyde-modified phosphatidylethanolamines formed by lipid peroxidation.Guo, Lilu; Chen, Zhongyi; Amarnath, Venkataraman; Davies, Sean SFree radical biology & medicine2012 Sep 151226-3822898174
Promoters recognized by forkhead proteins exist for individual 21U-RNAs.Cecere, Germano; Zheng, Grace X Y; Mansisidor, Andres R; Klymko, Katherine E; Grishok, AllaMolecular cell2012 Sep 14734-4522819322
Microfluidic single-cell analysis shows that porcine induced pluripotent stem cell-derived endothelial cells improve myocardial function by paracrine activation.Gu, Mingxia; Nguyen, Patricia K; Lee, Andrew S; Xu, Dan; Hu, Shijun; Plews, Jordan R; Han, Leng; Huber, Bruno C; Lee, Won Hee; Gong, Yongquan; de Almeida, Patricia E; Lyons, Jennifer; Ikeno, Fumi; Pacharinsak, Cholawat; Connolly, Andrew J; Gambhir, SanjivCirculation research2012 Sep 14882-9322821929
A high-throughput chromatin immunoprecipitation approach reveals principles of dynamic gene regulation in mammals.Garber, Manuel; Yosef, Nir; Goren, Alon; Raychowdhury, Raktima; Thielke, Anne; Guttman, Mitchell; Robinson, James; Minie, Brian; Chevrier, Nicolas; Itzhaki, Zohar; Blecher-Gonen, Ronnie; Bornstein, Chamutal; Amann-Zalcenstein, Daniela; Weiner, Assaf; FrieMolecular cell2012 Sep 14810-2222940246
Efferocytosis is an innate antibacterial mechanism.Martin, Constance J; Booty, Matthew G; Rosebrock, Tracy R; Nunes-Alves, Claudio; Desjardins, Danielle M; Keren, Iris; Fortune, Sarah M; Remold, Heinz G; Behar, Samuel MCell host & microbe2012 Sep 13289-30022980326
Se-adenosyl-L-selenomethionine cofactor analogue as a reporter of protein methylation.Bothwell, Ian R; Islam, Kabirul; Chen, Yuling; Zheng, Weihong; Blum, Gil; Deng, Haiteng; Luo, MinkuiJournal of the American Chemical Society2012 Sep 1214905-1222917021
Global mapping of translation initiation sites in mammalian cells at single-nucleotide resolution.Lee, Sooncheol; Liu, Botao; Lee, Soohyun; Huang, Sheng-Xiong; Shen, Ben; Qian, Shu-BingProceedings of the National Academy of Sciences of the United States of America2012 Sep 11E2424-3222927429
Water-soluble poly(L-serine)s with elongated and charged side-chains: synthesis, conformations, and cell-penetrating properties.Tang, Haoyu; Yin, Lichen; Lu, Hua; Cheng, JianjunBiomacromolecules2012 Sep 102609-1522853191
Single-shot characterization of enzymatic reaction constants Km and kcat by an acoustic-driven, bubble-based fast micromixer.Xie, Yuliang; Ahmed, Daniel; Lapsley, Michael Ian; Lin, Sz-Chin Steven; Nawaz, Ahmad Ahsan; Wang, Lin; Huang, Tony JunAnalytical chemistry2012 Sep 47495-50122880882
FAM123A binds to microtubules and inhibits the guanine nucleotide exchange factor ARHGEF2 to decrease actomyosin contractility.Siesser, Priscila F; Motolese, Marta; Walker, Matthew P; Goldfarb, Dennis; Gewain, Kelly; Yan, Feng; Kulikauskas, Rima M; Chien, Andy J; Wordeman, Linda; Major, Michael BScience signaling2012 Sep 4ra6422949735
A suite of molecular markers for identifying species, detecting introgression and describing population structure in spadefoot toads (Spea spp.).Pfennig, Karin S; Allenby, Ashley; Martin, Ryan A; Monroy, Anais; Jones, Corbin DMolecular ecology resources2012 Sep909-1722564443
Host glycans and antigen presentation.Ryan, Sean O; Cobb, Brian AMicrobes and infection / Institut Pasteur2012 Sep894-90322580092
Convergent functional genomics of schizophrenia: from comprehensive understanding to genetic risk prediction.Ayalew, M; Le-Niculescu, H; Levey, D F; Jain, N; Changala, B; Patel, S D; Winiger, E; Breier, A; Shekhar, A; Amdur, R; Koller, D; Nurnberger, J I; Corvin, A; Geyer, M; Tsuang, M T; Salomon, D; Schork, N J; Fanous, A H; O'Donovan, M C; Niculescu, A BMolecular psychiatry2012 Sep887-90522584867
Evidence for premature aging due to oxidative stress in iPSCs from Cockayne syndrome.Andrade, Luciana Nogueira de Sousa; Nathanson, Jason L; Yeo, Gene W; Menck, Carlos Frederico Martins; Muotri, Alysson RenatoHuman molecular genetics2012 Sep 13825-3422661500
Integrated genome analysis suggests that most conserved non-coding sequences are regulatory factor binding sites.Hemberg, Martin; Gray, Jesse M; Cloonan, Nicole; Kuersten, Scott; Grimmond, Sean; Greenberg, Michael E; Kreiman, GabrielNucleic acids research2012 Sep7858-6922684627
Global secretome analysis identifies novel mediators of bone metastasis.Blanco, Mario Andres; LeRoy, Gary; Khan, Zia; Aleckovic, Masa; Zee, Barry M; Garcia, Benjamin A; Kang, YibinCell research2012 Sep1339-5522688892
The antibiotic resistance arrow of time: efflux pump induction is a general first step in the evolution of mycobacterial drug resistance.Schmalstieg, Aurelia M; Srivastava, Shashikant; Belkaya, Serkan; Deshpande, Devyani; Meek, Claudia; Leff, Richard; van Oers, Nicolai S C; Gumbo, TawandaAntimicrobial agents and chemotherapy2012 Sep4806-1522751536
Defining the DNA uptake specificity of naturally competent Haemophilus influenzae cells.Mell, Joshua Chang; Hall, Ira M; Redfield, Rosemary JNucleic acids research2012 Sep 18536-4922753031
The small protein MbiA interacts with MreB and modulates cell shape in Caulobacter crescentus.Yakhnina, Anastasiya A; Gitai, ZemerMolecular microbiology2012 Sep1090-10422804814
Soft microenvironments promote the early neurogenic differentiation but not self-renewal of human pluripotent stem cells.Keung, Albert J; Asuri, Prashanth; Kumar, Sanjay; Schaffer, David VIntegrative biology : quantitative biosciences from nano to macro2012 Sep1049-5822854634
Imaging without lenses: achievements and remaining challenges of wide-field on-chip microscopy.Greenbaum, Alon; Luo, Wei; Su, Ting-Wei; Gorocs, Zoltan; Xue, Liang; Isikman, Serhan O; Coskun, Ahmet F; Mudanyali, Onur; Ozcan, AydoganNature methods2012 Sep889-9522936170
Teach-Discover-Treat (TDT): collaborative computational drug discovery for neglected diseases.Jansen, Johanna M; Cornell, Wendy; Tseng, Y Jane; Amaro, Rommie EJournal of molecular graphics & modelling2012 Sep360-223085175
Polyvalent mesoporous silica nanoparticle-aptamer bioconjugates target breast cancer cells.Li, Le-Le; Yin, Qian; Cheng, Jianjun; Lu, YiAdvanced healthcare materials2012 Sep567-7223184791
Label-Free, Longitudinal Visualization of PDT Response In Vitro with Optical Coherence Tomography.Jung, Yookyung; Nichols, Alexander J; Klein, Oliver J; Roussakis, Emmanuel; Evans, Conor LIsrael journal of chemistry2012 Sep728-74423316088
Lis1 acts as a "clutch" between the ATPase and microtubule-binding domains of the dynein motor.Huang, Julie; Roberts, Anthony J; Leschziner, Andres E; Reck-Peterson, Samara LCell2012 Aug 31975-8622939623
Reprogramming the beat: kicking it up a notch.Wu, Sean M; Milan, David JCirculation2012 Aug 281009-1122837161
Surface acoustic wave (SAW) acoustophoresis: now and beyond.Lin, Sz-Chin Steven; Mao, Xiaole; Huang, Tony JunLab on a chip2012 Aug 212766-7022781941
Release factor one is nonessential in Escherichia coli.Johnson, David B F; Wang, Chong; Xu, Jianfeng; Schultz, Matthew D; Schmitz, Robert J; Ecker, Joseph R; Wang, LeiACS chemical biology2012 Aug 171337-4422662873
Conformational dynamics accompanying the proteolytic degradation of trimeric collagen I by collagenases.Adhikari, Arjun S; Glassey, Emerson; Dunn, Alexander RJournal of the American Chemical Society2012 Aug 1513259-6522720833
Adventures in neurobioengineering.Jasanoff, AlanACS chemical neuroscience2012 Aug 1557522896800
Bioengineered probes for molecular magnetic resonance imaging in the nervous system.Hsieh, Vivian; Jasanoff, AlanACS chemical neuroscience2012 Aug 15593-60222896803
Fluorophore and dye-assisted dispersion of carbon nanotubes in aqueous solution.Koh, Byumseok; Kim, Gwangseong; Yoon, Hyung Ki; Park, Jong Bae; Kopelman, Raoul; Cheng, WeiLangmuir : the ACS journal of surfaces and colloids2012 Aug 1411676-8622812904
Sox2+ stem cells contribute to all epithelial lineages of the tooth via Sfrp5+ progenitors.Juuri, Emma; Saito, Kan; Ahtiainen, Laura; Seidel, Kerstin; Tummers, Mark; Hochedlinger, Konrad; Klein, Ophir D; Thesleff, Irma; Michon, FredericDevelopmental cell2012 Aug 14317-2822819339
Exploring residue component contributions to dynamical network models of allostery.Vanwart, Adam T; Eargle, John; Luthey-Schulten, Zaida; Amaro, Rommie EJournal of chemical theory and computation2012 Aug 142949-296123139645
Effects of trehalose polycation end-group functionalization on plasmid DNA uptake and transfection.Anderson, Kevin; Sizovs, Antons; Cortez, Mallory; Waldron, Chris; Haddleton, D M; Reineke, Theresa MBiomacromolecules2012 Aug 132229-3922616977
Cathepsin S cannibalism of cathepsin K as a mechanism to reduce type I collagen degradation.Barry, Zachary T; Platt, Manu OThe Journal of biological chemistry2012 Aug 1027723-3022730330
Role of phosphatidylinositol 4-phosphate (PI4P) and its binding protein GOLPH3 in hepatitis C virus secretion.Bishe, Bryan; Syed, Gulam H; Field, Seth J; Siddiqui, AleemThe Journal of biological chemistry2012 Aug 1027637-4722745132
Photodegradable macromers and hydrogels for live cell encapsulation and release.Griffin, Donald R; Kasko, Andrea MJournal of the American Chemical Society2012 Aug 813103-722765384
IRE1ýý induces thioredoxin-interacting protein to activate the NLRP3 inflammasome and promote programmed cell death under irremediable ER stress.Lerner, Alana G; Upton, John-Paul; Praveen, P V K; Ghosh, Rajarshi; Nakagawa, Yoshimi; Igbaria, Aeid; Shen, Sarah; Nguyen, Vinh; Backes, Bradley J; Heiman, Myriam; Heintz, Nathaniel; Greengard, Paul; Hui, Simon; Tang, Qizhi; Trusina, Ala; Oakes, Scott A; Cell metabolism2012 Aug 8250-6422883233
Quantitative analysis of amyloid-integrated biofilms formed by uropathogenic Escherichia coli at the air-liquid interface.Wu, Cynthia; Lim, Ji Youn; Fuller, Gerald G; Cegelski, LynetteBiophysical journal2012 Aug 8464-7122947862
Integrated rapid-diagnostic-test reader platform on a cellphone.Mudanyali, Onur; Dimitrov, Stoyan; Sikora, Uzair; Padmanabhan, Swati; Navruz, Isa; Ozcan, AydoganLab on a chip2012 Aug 72678-8622596243
Least median of squares filtering of locally optimal point matches for compressible flow image registration.Castillo, Edward; Castillo, Richard; White, Benjamin; Rojo, Javier; Guerrero, ThomasPhysics in medicine and biology2012 Aug 74827-3322797602
Exploring the mechanism of plasmid DNA nuclear internalization with polymer-based vehicles.Grandinetti, Giovanna; Reineke, Theresa MMolecular pharmaceutics2012 Aug 62256-6722715912
Host remodeling of the gut microbiome and metabolic changes during pregnancy.Koren, Omry; Goodrich, Julia K; Cullender, Tyler C; Spor, Ayme; Laitinen, Kirsi; Backhed, Helene Kling; Gonzalez, Antonio; Werner, Jeffrey J; Angenent, Largus T; Knight, Rob; Backhed, Fredrik; Isolauri, Erika; Salminen, Seppo; Ley, Ruth ECell2012 Aug 3470-8022863002
Multifunctional materials through modular protein engineering.DiMarco, Rebecca L; Heilshorn, Sarah CAdvanced materials (Deerfield Beach, Fla.)2012 Aug 23923-4022730248
Generation of a library of non-toxic quantum dots for cellular imaging and siRNA delivery.Subramaniam, Prasad; Lee, Seung Jae; Shah, Shreyas; Patel, Sahishnu; Starovoytov, Valentin; Lee, Ki-BumAdvanced materials (Deerfield Beach, Fla.)2012 Aug 24014-922744954
Nanoparticle surface charge mediates the cellular receptors used by protein-nanoparticle complexes.Fleischer, Candace C; Payne, Christine KThe journal of physical chemistry. B2012 Aug 28901-722774860
Proteotoxic stress of cancer: implication of the heat-shock response in oncogenesis.Dai, Chengkai; Dai, Siyuan; Cao, JunyueJournal of cellular physiology2012 Aug2982-722105155
Photochemical mechanisms of light-triggered release from nanocarriers.Fomina, Nadezda; Sankaranarayanan, Jagadis; Almutairi, AdahAdvanced drug delivery reviews2012 Aug1005-2022386560
Infection, inflammation and host carbohydrates: a Glyco-Evasion Hypothesis.Kreisman, Lori Sc; Cobb, Brian AGlycobiology2012 Aug1019-3022492234
Clinical evidence for the utility of movement compensation algorithm in magnetoencephalography: successful localization during focal seizure.Kakisaka, Yosuke; Wang, Zhong I; Mosher, John C; Dubarry, Anne-Sophie; Alexopoulos, Andreas V; Enatsu, Rei; Kotagal, Prakash; Burgess, Richard CEpilepsy research2012 Aug191-622503605
Distinct TDP-43 pathology in ALS patients with ataxin 2 intermediate-length polyQ expansions.Hart, Michael P; Brettschneider, Johannes; Lee, Virginia M Y; Trojanowski, John Q; Gitler, Aaron DActa neuropathologica2012 Aug221-3022526021
Differential activation of the ER stress factor XBP1 by oligomeric assemblies.Castillo-Carranza, Diana L; Zhang, Yan; Guerrero-Munoz, Marcos J; Kayed, Rakez; Rincon-Limas, Diego E; Fernandez-Funez, PedroNeurochemical research2012 Aug1707-1722528838
Tumor necrosis factor alpha stimulates cathepsin K and V activity via juxtacrine monocyte-endothelial cell signaling and JNK activation.Keegan, Philip M; Wilder, Catera L; Platt, Manu OMolecular and cellular biochemistry2012 Aug65-7222562303
Membrane requirement for folding of the herpes simplex virus 1 gB cytodomain suggests a unique mechanism of fusion regulation.Silverman, Jessica L; Greene, Neil G; King, David S; Heldwein, Ekaterina EJournal of virology2012 Aug8171-8422623783
Polarity and lymphocyte fate determination.Chang, John TCurrent opinion in cell biology2012 Aug526-3322658837
Nanofabrication using near-field optical probes.McLeod, Euan; Ozcan, AydoganJournal of laboratory automation2012 Aug248-5422713756
Advances in targeted genome editing.Perez-Pinera, Pablo; Ousterout, David G; Gersbach, Charles ACurrent opinion in chemical biology2012 Aug268-7722819644
Strain background influences neurotoxicity and behavioral abnormalities in mice expressing the tetracycline transactivator.Han, Harry J; Allen, Carolyn C; Buchovecky, Christie M; Yetman, Michael J; Born, Heather A; Marin, Miguel A; Rodgers, Shaefali P; Song, Bryan J; Lu, Hui-Chen; Justice, Monica J; Probst, Frank J; Jankowsky, Joanna LThe Journal of neuroscience : the official journal of the Society for Neuroscience2012 Aug 110574-8622855807
Modeling the latent dimensions of multivariate signaling datasets.Jensen, Karin J; Janes, Kevin APhysical biology2012 Aug04500422871687
Monitoring cotranslational protein folding in mammalian cells at codon resolution.Han, Yan; David, Alexandre; Liu, Botao; Magadan, Javier G; Bennink, Jack R; Yewdell, Jonathan W; Qian, Shu-BingProceedings of the National Academy of Sciences of the United States of America2012 Jul 3112467-7222802618
E-cadherin is under constitutive actomyosin-generated tension that is increased at cell-cell contacts upon externally applied stretch.Borghi, Nicolas; Sorokina, Maria; Shcherbakova, Olga G; Weis, William I; Pruitt, Beth L; Nelson, W James; Dunn, Alexander RProceedings of the National Academy of Sciences of the United States of America2012 Jul 3112568-7322802638
Tunable patterning of microparticles and cells using standing surface acoustic waves.Ding, Xiaoyun; Shi, Jinjie; Lin, Sz-Chin Steven; Yazdi, Shahrzad; Kiraly, Brian; Huang, Tony JunLab on a chip2012 Jul 212491-722648600
Expanding the genetic code of Caenorhabditis elegans using bacterial aminoacyl-tRNA synthetase/tRNA pairs.Parrish, Angela R; She, Xingyu; Xiang, Zheng; Coin, Irene; Shen, Zhouxin; Briggs, Steven P; Dillin, Andrew; Wang, LeiACS chemical biology2012 Jul 201292-30222554080
Antibody-recruiting molecules: an emerging paradigm for engaging immune function in treating human disease.McEnaney, Patrick J; Parker, Christopher G; Zhang, Andrew X; Spiegel, David AACS chemical biology2012 Jul 201139-5122758917
A landscape of driver mutations in melanoma.Hodis, Eran; Watson, Ian R; Kryukov, Gregory V; Arold, Stefan T; Imielinski, Marcin; Theurillat, Jean-Philippe; Nickerson, Elizabeth; Auclair, Daniel; Li, Liren; Place, Chelsea; Dicara, Daniel; Ramos, Alex H; Lawrence, Michael S; Cibulskis, Kristian; SivaCell2012 Jul 20251-6322817889
DCAP: a broad-spectrum antibiotic that targets the cytoplasmic membrane of bacteria.Eun, Ye-Jin; Foss, Marie H; Kiekebusch, Daniela; Pauw, Daniel A; Westler, William M; Thanbichler, Martin; Weibel, Douglas BJournal of the American Chemical Society2012 Jul 1811322-522741745
Neutrophil chemotaxis within a competing gradient of chemoattractants.Kim, Donghyuk; Haynes, Christy LAnalytical chemistry2012 Jul 176070-822816782
A Single UV or Near IR Triggering Event Leads to Polymer Degradation into Small Molecules.de Gracia Lux, Caroline; McFearin, Cathryn L; Joshi-Barr, Shivanjali; Sankaranarayanan, Jagadis; Fomina, Nadezda; Almutairi, AdahACS macro letters2012 Jul 17922-92623066523
Voltage-gated ion transport through semiconducting conical nanopores formed by metal nanoparticle-assisted plasma etching.James, Teena; Kalinin, Yevgeniy V; Chan, Chih-Chieh; Randhawa, Jatinder S; Gaevski, Mikhail; Gracias, David HNano letters2012 Jul 113437-4222725714
On-chip manipulation of single microparticles, cells, and organisms using surface acoustic waves.Ding, Xiaoyun; Lin, Sz-Chin Steven; Kiraly, Brian; Yue, Hongjun; Li, Sixing; Chiang, I-Kao; Shi, Jinjie; Benkovic, Stephen J; Huang, Tony JunProceedings of the National Academy of Sciences of the United States of America2012 Jul 1011105-922733731
Peptide bicycles that inhibit the Grb2 SH2 domain.Quartararo, Justin S; Wu, Pianpian; Kritzer, Joshua AChembiochem : a European journal of chemical biology2012 Jul 91490-622689355
An old drug for new ideas: metformin promotes adult neurogenesis and spatial memory formation.Potts, Matthew B; Lim, Daniel ACell stem cell2012 Jul 66-May22770236
SIRT7 links H3K18 deacetylation to maintenance of oncogenic transformation.Barber, Matthew F; Michishita-Kioi, Eriko; Xi, Yuanxin; Tasselli, Luisa; Kioi, Mitomu; Moqtaderi, Zarmik; Tennen, Ruth I; Paredes, Silvana; Young, Nicolas L; Chen, Kaifu; Struhl, Kevin; Garcia, Benjamin A; Gozani, Or; Li, Wei; Chua, Katrin FNature2012 Jul 5114-822722849
ALS-associated ataxin 2 polyQ expansions enhance stress-induced caspase 3 activation and increase TDP-43 pathological modifications.Hart, Michael P; Gitler, Aaron DThe Journal of neuroscience : the official journal of the Society for Neuroscience2012 Jul 49133-4222764223
Nonlinear analyte concentration gradients for one-step kinetic analysis employing optical microring resonators.Marty, Michael T; Sloan, Courtney D Kuhnline; Bailey, Ryan C; Sligar, Stephen GAnalytical chemistry2012 Jul 35556-6422686186
Crystal structure of the ternary complex of a NaV C-terminal domain, a fibroblast growth factor homologous factor, and calmodulin.Wang, Chaojian; Chung, Ben C; Yan, Haidun; Lee, Seok-Yong; Pitt, Geoffrey SStructure (London, England : 1993)2012 Jul 31167-7622705208
Flow directs surface-attached bacteria to twitch upstream.Shen, Yi; Siryaporn, Albert; Lecuyer, Sigolene; Gitai, Zemer; Stone, Howard ABiophysical journal2012 Jul 3146-5122828341
An extracellular MRI polymeric contrast agent that degrades at physiological pH.Schopf, Eric; Sankaranarayanan, Jagadis; Chan, Minnie; Mattrey, Robert; Almutairi, AdahMolecular pharmaceutics2012 Jul 21911-822657107
Evaluating the role of the FUS/TLS-related gene EWSR1 in amyotrophic lateral sclerosis.Couthouis, Julien; Hart, Michael P; Erion, Renske; King, Oliver D; Diaz, Zamia; Nakaya, Tadashi; Ibrahim, Fadia; Kim, Hyung-Jun; Mojsilovic-Petrovic, Jelena; Panossian, Saarene; Kim, Cecilia E; Frackelton, Edward C; Solski, Jennifer A; Williams, Kelly L; Human molecular genetics2012 Jul 12899-91122454397
Translating basic science insight into public health action for multidrug- and extensively drug-resistant tuberculosis.Walter, Nicholas D; Strong, Michael; Belknap, Robert; Ordway, Diane J; Daley, Charles L; Chan, Edward DRespirology (Carlton, Vic.)2012 Jul772-9122458269
Relaxed genetic constraint is ancestral to the evolution of phenotypic plasticity.Leichty, Aaron R; Pfennig, David W; Jones, Corbin D; Pfennig, Karin SIntegrative and comparative biology2012 Jul16-3022526866
Physical and chemical strategies for therapeutic delivery by using polymeric nanoparticles.Morachis, Jose M; Mahmoud, Enas A; Almutairi, AdahPharmacological reviews2012 Jul505-1922544864
Origins and formation of histone methylation across the human cell cycle.Zee, Barry M; Britton, Laura-Mae P; Wolle, Daniel; Haberman, Devorah M; Garcia, Benjamin AMolecular and cellular biology2012 Jul2503-1422547680
Numb regulates glioma stem cell fate and growth by altering epidermal growth factor receptor and Skp1-Cullin-F-box ubiquitin ligase activity.Jiang, Xiuli; Xing, Hongyan; Kim, Tae-Min; Jung, Yuchae; Huang, Wei; Yang, Hong Wei; Song, Shengye; Park, Peter J; Carroll, Rona S; Johnson, Mark DStem cells (Dayton, Ohio)2012 Jul1313-2622553175
The Hippo signaling pathway and stem cell biology.Ramos, Azucena; Camargo, Fernando DTrends in cell biology2012 Jul339-4622658639
Single-cell systems biology by super-resolution imaging and combinatorial labeling.Lubeck, Eric; Cai, LongNature methods2012 Jul743-822660740
Zebrafish models in cardiac development and congenital heart birth defects.Tu, Shu; Chi, Neil CDifferentiation; research in biological diversity2012 Jul4-1622704690
Stem cell and biomaterials research in dental tissue engineering and regeneration.Horst, Orapin V; Chavez, Miquella G; Jheon, Andrew H; Desai, Tejal; Klein, Ophir DDental clinics of North America2012 Jul495-52022835534
The tip of the iceberg: RNA-binding proteins with prion-like domains in neurodegenerative disease.King, Oliver D; Gitler, Aaron D; Shorter, JamesBrain research2012 Jun 2661-8022445064
Independent regulation of tumor cell migration by matrix stiffness and confinement.Pathak, Amit; Kumar, SanjayProceedings of the National Academy of Sciences of the United States of America2012 Jun 2610334-922689955
Building stem cell niches from the molecule up through engineered peptide materials.Lampe, Kyle J; Heilshorn, Sarah CNeuroscience letters2012 Jun 25138-4622322073
Engineering therapies in the CNS: what works and what can be translated.Shoffstall, Andrew J; Taylor, Dawn M; Lavik, Erin BNeuroscience letters2012 Jun 25147-5422330751
Lis1 is an initiation factor for dynein-driven organelle transport.Egan, Martin J; Tan, Kaeling; Reck-Peterson, Samara LThe Journal of cell biology2012 Jun 25971-8222711696
Inefficient reprogramming of fibroblasts into cardiomyocytes using Gata4, Mef2c, and Tbx5.Chen, Jenny X; Krane, Markus; Deutsch, Marcus-Andre; Wang, Li; Rav-Acha, Moshe; Gregoire, Serge; Engels, Marc C; Rajarajan, Kuppusamy; Karra, Ravi; Abel, E Dale; Wu, Joe C; Milan, David; Wu, Sean MCirculation research2012 Jun 2250-522581928
Microfluidic synthesis of multifunctional Janus particles for biomedical applications.Yang, Shikuan; Guo, Feng; Kiraly, Brian; Mao, Xiaole; Lu, Mengqian; Leong, Kam W; Huang, Tony JunLab on a chip2012 Jun 212097-10222584998
Posttranslational acetylation of ýý-tubulin constrains protofilament number in native microtubules.Cueva, Juan G; Hsin, Jen; Huang, Kerwyn Casey; Goodman, Miriam BCurrent biology : CB2012 Jun 191066-7422658592
Clickable Amphiphilic Triblock Copolymers.Isaacman, Michael J; Barron, Kathryn A; Theogarajan, Luke SJournal of polymer science. Part A, Polymer chemistry2012 Jun 152319-232923100856
Structure, function and diversity of the healthy human microbiome.Human Microbiome Project ConsortiumNature2012 Jun 14207-1422699609
A framework for human microbiome research.Human Microbiome Project ConsortiumNature2012 Jun 14215-2122699610
Scalable fabrication of self-aligned graphene transistors and circuits on glass.Liao, Lei; Bai, Jingwei; Cheng, Rui; Zhou, Hailong; Liu, Lixin; Liu, Yuan; Huang, Yu; Duan, XiangfengNano letters2012 Jun 132653-721648419
Nucleotide-dependent conformations of FtsZ dimers and force generation observed through molecular dynamics simulations.Hsin, Jen; Gopinathan, Ajay; Huang, Kerwyn CProceedings of the National Academy of Sciences of the United States of America2012 Jun 129432-722647609
Comparative epigenomic annotation of regulatory DNA.Xiao, Shu; Xie, Dan; Cao, Xiaoyi; Yu, Pengfei; Xing, Xiaoyun; Chen, Chieh-Chun; Musselman, Meagan; Xie, Mingchao; West, Franklin D; Lewin, Harris A; Wang, Ting; Zhong, ShengCell2012 Jun 81381-9222682255
Quantum dot enabled detection of Escherichia coli using a cell-phone.Zhu, Hongying; Sikora, Uzair; Ozcan, AydoganThe Analyst2012 Jun 72541-422396952
Quantification of degeneracy in biological systems for characterization of functional interactions between modules.Li, Yao; Dwivedi, Gaurav; Huang, Wen; Kemp, Melissa L; Yi, YingfeiJournal of theoretical biology2012 Jun 729-3822619750
Activity-based probe for histidine kinase signaling.Wilke, Kaelyn E; Francis, Samson; Carlson, Erin EJournal of the American Chemical Society2012 Jun 69150-322606938
Synaptic plasticity defect following visual deprivation in Alzheimer's disease model transgenic mice.William, Christopher M; Andermann, Mark L; Goldey, Glenn J; Roumis, Demetris K; Reid, R Clay; Shatz, Carla J; Albers, Mark W; Frosch, Matthew P; Hyman, Bradley TThe Journal of neuroscience : the official journal of the Society for Neuroscience2012 Jun 68004-1122674275
Microbiota-targeted therapies: an ecological perspective.Lemon, Katherine P; Armitage, Gary C; Relman, David A; Fischbach, Michael AScience translational medicine2012 Jun 6137rv522674555
H3K4 demethylation by Jarid1a and Jarid1b contributes to retinoblastoma-mediated gene silencing during cellular senescence.Chicas, Agustin; Kapoor, Avnish; Wang, Xiaowo; Aksoy, Ozlem; Evertts, Adam G; Zhang, Michael Q; Garcia, Benjamin A; Bernstein, Emily; Lowe, Scott WProceedings of the National Academy of Sciences of the United States of America2012 Jun 58971-622615382
Electrowetting-driven variable-focus microlens on flexible surfaces.Li, Chenhui; Jiang, HongruiApplied physics letters2012 Jun 4231105-231105422904571
Moderating effects of childhood maltreatment on associations between social information processing and adult aggression.Chen, P; Coccaro, E F; Lee, R; Jacobson, K CPsychological medicine2012 Jun1293-30422008562
A high throughput scintillation proximity imaging assay for protein methyltransferases.Ibanez, Glorymar; Shum, David; Blum, Gil; Bhinder, Bhavneet; Radu, Constantin; Antczak, Christophe; Luo, Minkui; Djaballah, HakimCombinatorial chemistry & high throughput screening2012 Jun 1359-7122256970
Voxel-based morphometric MRI post-processing in MRI-negative focal cortical dysplasia followed by simultaneously recorded MEG and stereo-EEG.Wang, Z I; Jones, S E; Ristic, A J; Wong, C; Kakisaka, Y; Jin, K; Schneider, F; Gonzalez-Martinez, J A; Mosher, J C; Nair, D; Burgess, R C; Najm, I M; Alexopoulos, A VEpilepsy research2012 Jun188-9322391138
Expression of essential B cell development genes in horses with common variable immunodeficiency.Tallmadge, R L; Such, K A; Miller, K C; Matychak, M B; Felippe, M J BMolecular immunology2012 Jun169-7622464097
Outcomes among tuberculosis patients with isoniazid resistance in Georgia, 2007-2009.Gegia, M; Cohen, T; Kalandadze, I; Vashakidze, L; Furin, JThe international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease2012 Jun812-622507372
YcaO domains use ATP to activate amide backbones during peptide cyclodehydrations.Dunbar, Kyle L; Melby, Joel O; Mitchell, Douglas ANature chemical biology2012 Jun569-7522522320
Label-free, multiplexed detection of bacterial tmRNA using silicon photonic microring resonators.Scheler, Ott; Kindt, Jared T; Qavi, Abraham J; Kaplinski, Lauris; Glynn, Barry; Barry, Thomas; Kurg, Ants; Bailey, Ryan CBiosensors & bioelectronics2012 Jun-Jul56-6122541813
Measuring the stiffness of bacterial cells from growth rates in hydrogels of tunable elasticity.Tuson, Hannah H; Auer, George K; Renner, Lars D; Hasebe, Mariko; Tropini, Carolina; Salick, Max; Crone, Wendy C; Gopinathan, Ajay; Huang, Kerwyn Casey; Weibel, Douglas BMolecular microbiology2012 Jun874-9122548341
Automated whole-cell patch-clamp electrophysiology of neurons in vivo.Kodandaramaiah, Suhasa B; Franzesi, Giovanni Talei; Chow, Brian Y; Boyden, Edward S; Forest, Craig RNature methods2012 Jun585-722561988
Renal stem cells: fact or science fiction?McCampbell, Kristen K; Wingert, Rebecca AThe Biochemical journal2012 Jun 1153-6822574774
Exome sequencing identifies recurrent SPOP, FOXA1 and MED12 mutations in prostate cancer.Barbieri, Christopher E; Baca, Sylvan C; Lawrence, Michael S; Demichelis, Francesca; Blattner, Mirjam; Theurillat, Jean-Philippe; White, Thomas A; Stojanov, Petar; Van Allen, Eliezer; Stransky, Nicolas; Nickerson, Elizabeth; Chae, Sung-Suk; Boysen, GuntheNature genetics2012 Jun685-922610119
Specialized ribosomes: a new frontier in gene regulation and organismal biology.Xue, Shifeng; Barna, MariaNature reviews. Molecular cell biology2012 Jun355-6922617470
Recent developments in single-molecule DNA mechanics.Bryant, Zev; Oberstrass, Florian C; Basu, AakashCurrent opinion in structural biology2012 Jun304-1222658779
Obesity and the risk and detection of fetal malformations.Racusin, Diana; Stevens, Blair; Campbell, Genevieve; Aagaard, Kjersti MSeminars in perinatology2012 Jun213-2122713503
Vortex Formation and Foraging in Polyphenic Spadefoot Toad Tadpoles.Bazazi, Sepideh; Pfennig, Karin S; Handegard, Nils Olav; Couzin, Iain DBehavioral ecology and sociobiology2012 Jun879-88923185101
Complex shapes self-assembled from single-stranded DNA tiles.Wei, Bryan; Dai, Mingjie; Yin, PengNature2012 May 31623-622660323
Exploring post-translational arginine modification using chemically synthesized methylglyoxal hydroimidazolones.Wang, Tina; Kartika, Rendy; Spiegel, David AJournal of the American Chemical Society2012 May 308958-6722591136
Peptidomics approach to elucidate the proteolytic regulation of bioactive peptides.Kim, Yun-Gon; Lone, Anna Mari; Nolte, Whitney M; Saghatelian, AlanProceedings of the National Academy of Sciences of the United States of America2012 May 298523-722586115
A screen for non-coding RNA in Mycobacterium tuberculosis reveals a cAMP-responsive RNA that is expressed during infection.Pelly, Shaaretha; Bishai, William R; Lamichhane, GyanuGene2012 May 2585-9222446041
Elements of nucleotide specificity in the Trypanosoma brucei mitochondrial RNA editing enzyme RET2.Demir, Ozlem; Amaro, Rommie EJournal of chemical information and modeling2012 May 251308-1822512810
Melanoma genome sequencing reveals frequent PREX2 mutations.Berger, Michael F; Hodis, Eran; Heffernan, Timothy P; Deribe, Yonathan Lissanu; Lawrence, Michael S; Protopopov, Alexei; Ivanova, Elena; Watson, Ian R; Nickerson, Elizabeth; Ghosh, Papia; Zhang, Hailei; Zeid, Rhamy; Ren, Xiaojia; Cibulskis, Kristian; SivaNature2012 May 24502-622622578
Modeling the dynamic relationship between HIV and the risk of drug-resistant tuberculosis.Sergeev, Rinat; Colijn, Caroline; Murray, Megan; Cohen, TedScience translational medicine2012 May 23135ra6722623743
Surface charge-switching polymeric nanoparticles for bacterial cell wall-targeted delivery of antibiotics.Radovic-Moreno, Aleksandar F; Lu, Timothy K; Puscasu, Vlad A; Yoon, Christopher J; Langer, Robert; Farokhzad, Omid CACS nano2012 May 224279-8722471841
Synthesis and biological response of size-specific, monodisperse drug-silica nanoconjugates.Tang, Li; Fan, Timothy M; Borst, Luke B; Cheng, JianjunACS nano2012 May 223954-6622494403
Imaging lysosomal enzyme activity in live cells using self-quenched substrates.Humphries 4th, William H; Payne, Christine KAnalytical biochemistry2012 May 15178-8322387398
Small molecule regulators of postnatal Nkx2.5 cardiomyoblast proliferation and differentiation.Chen, Wen-Pin; Wu, Sean MJournal of cellular and molecular medicine2012 May961-522212626
Mycobacterium tuberculosis--heterogeneity revealed through whole genome sequencing.Ford, Chris; Yusim, Karina; Ioerger, Tom; Feng, Shihai; Chase, Michael; Greene, Mary; Korber, Bette; Fortune, SarahTuberculosis (Edinburgh, Scotland)2012 May194-20122218163
Development and evolution of character displacement.Pfennig, David W; Pfennig, Karin SAnnals of the New York Academy of Sciences2012 May89-10722257002
Direct and specific chemical control of eukaryotic translation with a synthetic RNA-protein interaction.Goldfless, Stephen J; Belmont, Brian J; de Paz, Alexandra M; Liu, Jessica F; Niles, Jacquin CNucleic acids research2012 Maye6422275521
Transcriptional analysis of pluripotency reveals the Hippo pathway as a barrier to reprogramming.Qin, Han; Blaschke, Kathryn; Wei, Grace; Ohi, Yuki; Blouin, Laure; Qi, Zhongxia; Yu, Jingwei; Yeh, Ru-Fang; Hebrok, Matthias; Ramalho-Santos, MiguelHuman molecular genetics2012 May 12054-6722286172
Identifying multidrug resistant tuberculosis transmission hotspots using routinely collected data.Manjourides, Justin; Lin, Hsien-Ho; Shin, Sonya; Jeffery, Caroline; Contreras, Carmen; Cruz, Janeth Santa; Jave, Oswaldo; Yagui, Martin; Asencios, Luis; Pagano, Marcello; Cohen, TedTuberculosis (Edinburgh, Scotland)2012 May273-922401962
Image analysis in fluorescence microscopy: bacterial dynamics as a case study.van Teeffelen, Sven; Shaevitz, Joshua W; Gitai, ZemerBioEssays : news and reviews in molecular, cellular and developmental biology2012 May427-3622415868
Dynamic microRNA expression during the transition from right ventricular hypertrophy to failure.Reddy, Sushma; Zhao, Mingming; Hu, Dong-Qing; Fajardo, Giovanni; Hu, Shijun; Ghosh, Zhumur; Rajagopalan, Viswanathan; Wu, Joseph C; Bernstein, DanielPhysiological genomics2012 May 1562-7522454450
Roles for major histocompatibility complex glycosylation in immune function.Ryan, Sean O; Cobb, Brian ASeminars in immunopathology2012 May425-4122461020
Cutting edge: Asymmetric memory T cell division in response to rechallenge.Ciocca, Maria L; Barnett, Burton E; Burkhardt, Janis K; Chang, John T; Reiner, Steven LJournal of immunology (Baltimore, Md. : 1950)2012 May 14145-822467651
Microfluidic single-cell real-time PCR for comparative analysis of gene expression patterns.Sanchez-Freire, Veronica; Ebert, Antje D; Kalisky, Tomer; Quake, Stephen R; Wu, Joseph CNature protocols2012 May829-3822481529
ATP binding controls distinct structural transitions of Escherichia coli DNA gyrase in complex with DNA.Basu, Aakash; Schoeffler, Allyn J; Berger, James M; Bryant, ZevNature structural & molecular biology2012 May538-46, S122484318
Use of spatial information to predict multidrug resistance in tuberculosis patients, Peru.Lin, Hsien-Ho; Shin, Sonya S; Contreras, Carmen; Asencios, Luis; Paciorek, Christopher J; Cohen, TedEmerging infectious diseases2012 May811-322516236
Molecular plasmonics for biology and nanomedicine.Zheng, Yue Bing; Kiraly, Brian; Weiss, Paul S; Huang, Tony JunNanomedicine (London, England)2012 May751-7022630155
Biological stimuli and biomolecules in the assembly and manipulation of nanoscale polymeric particles.Randolph, Lyndsay M; Chien, Miao-Ping; Gianneschi, Nathan CChemical science (Royal Society of Chemistry : 2010)2012 May 1NULL24353895
Crowding induces live cell extrusion to maintain homeostatic cell numbers in epithelia.Eisenhoffer, George T; Loftus, Patrick D; Yoshigi, Masaaki; Otsuna, Hideo; Chien, Chi-Bin; Morcos, Paul A; Rosenblatt, JodyNature2012 Apr 26546-922504183
Microfluidic diagnostics for the developing world.Mao, Xiaole; Huang, Tony JunLab on a chip2012 Apr 211412-622406768
Patient-specific induced pluripotent stem cells as a model for familial dilated cardiomyopathy.Sun, Ning; Yazawa, Masayuki; Liu, Jianwei; Han, Leng; Sanchez-Freire, Veronica; Abilez, Oscar J; Navarrete, Enrique G; Hu, Shijun; Wang, Li; Lee, Andrew; Pavlovic, Aleksandra; Lin, Shin; Chen, Rui; Hajjar, Roger J; Snyder, Michael P; Dolmetsch, Ricardo E;Science translational medicine2012 Apr 18130ra4722517884
Microfluidic integration for automated targeted proteomic assays.Hughes, Alex J; Lin, Robert K C; Peehl, Donna M; Herr, Amy EProceedings of the National Academy of Sciences of the United States of America2012 Apr 175972-722474344
Synthesis of water-soluble poly(ýý-hydroxy acids) from living ring-opening polymerization of O-benzyl-L-serine carboxyanhydrides.Lu, Yanbing; Yin, Lichen; Zhang, Yanfeng; Zhonghai, Zhang; Xu, Yunxiang; Tong, Rong; Cheng, JianjunACS macro letters2012 Apr 17441-44423359651
Graphene-supported hemin as a highly active biomimetic oxidation catalyst.Xue, Teng; Jiang, Shan; Qu, Yongquan; Su, Qiao; Cheng, Rui; Dubin, Sergey; Chiu, Chin-Yi; Kaner, Richard; Huang, Yu; Duan, XiangfengAngewandte Chemie (International ed. in English)2012 Apr 163822-522368046
Domain wall motion in synthetic Co2Si nanowires.Liu, Gang; Lin, Yung-Chen; Liao, Lei; Liu, Lixin; Chen, Yu; Liu, Yuan; Weiss, Nathan O; Zhou, Hailong; Huang, Yu; Duan, XiangfengNano letters2012 Apr 111972-622469009
Spatial correspondence of 4D CT ventilation and SPECT pulmonary perfusion defects in patients with malignant airway stenosis.Castillo, Richard; Castillo, Edward; McCurdy, Matthew; Gomez, Daniel R; Block, Alec M; Bergsma, Derek; Joy, Sarah; Guerrero, ThomasPhysics in medicine and biology2012 Apr 71855-7122411124
Bioorthogonal profiling of protein methylation using azido derivative of S-adenosyl-L-methionine.Islam, Kabirul; Bothwell, Ian; Chen, Yuling; Sengelaub, Caitlin; Wang, Rui; Deng, Haiteng; Luo, MinkuiJournal of the American Chemical Society2012 Apr 45909-1522404544
HIV-1 Integrase Inhibitor-Inspired Antibacterials Targeting Isoprenoid Biosynthesis.Zhang, Yonghui; Fu-Yang Lin; Li, Kai; Zhu, Wei; Liu, Yi-Liang; Cao, Rong; Pang, Ran; Lee, Eunhae; Axelson, Jordan; Hensler, Mary; Wang, Ke; Molohon, Katie J; Wang, Yang; Mitchell, Douglas A; Nizet, Victor; Oldfield, EricACS medicinal chemistry letters2012 Apr 3402-40622662288
Improving viability of stem cells during syringe needle flow through the design of hydrogel cell carriers.Aguado, Brian A; Mulyasasmita, Widya; Su, James; Lampe, Kyle J; Heilshorn, Sarah CTissue engineering. Part A2012 Apr806-1522011213
Multiscale photoacoustic microscopy of single-walled carbon nanotube-incorporated tissue engineering scaffolds.Cai, Xin; Paratala, Bhavna S; Hu, Song; Sitharaman, Balaji; Wang, Lihong VTissue engineering. Part C, Methods2012 Apr310-722082018
Unravelling global genome organization by 3C-seq.Tanizawa, Hideki; Noma, Ken-ichiSeminars in cell & developmental biology2012 Apr213-2122120510
Sexual experience affects reproductive behavior and preoptic androgen receptors in male mice.Swaney, William T; Dubose, Brittany N; Curley, James P; Champagne, Frances AHormones and behavior2012 Apr472-822266118
Spry1 and spry2 are essential for development of the temporomandibular joint.Purcell, P; Jheon, A; Vivero, M P; Rahimi, H; Joo, A; Klein, O DJournal of dental research2012 Apr387-9322328578
Engineering controllable bidirectional molecular motors based on myosin.Chen, Lu; Nakamura, Muneaki; Schindler, Tony D; Parker, David; Bryant, ZevNature nanotechnology2012 Apr252-622343382
Small RNA in the nucleus: the RNA-chromatin ping-pong.Olovnikov, Ivan; Aravin, Alexei A; Fejes Toth, KatalinCurrent opinion in genetics & development2012 Apr164-7122349141
Ascorbic acid prevents loss of Dlk1-Dio3 imprinting and facilitates generation of all-iPS cell mice from terminally differentiated B cells.Stadtfeld, Matthias; Apostolou, Effie; Ferrari, Francesco; Choi, Jiho; Walsh, Ryan M; Chen, Taiping; Ooi, Steen S K; Kim, Sang Yong; Bestor, Timothy H; Shioda, Toshi; Park, Peter J; Hochedlinger, KonradNature genetics2012 Apr398-405, S1-222387999
Injectable biomaterials for adipose tissue engineering.Young, D A; Christman, K LBiomedical materials (Bristol, England)2012 Apr02410422456805
Glycobiology of immune responses.Rabinovich, Gabriel A; van Kooyk, Yvette; Cobb, Brian AAnnals of the New York Academy of Sciences2012 Apr1-1522524422
Advancing the sensitivity of selected reaction monitoring-based targeted quantitative proteomics.Shi, Tujin; Su, Dian; Liu, Tao; Tang, Keqi; Camp 2nd, David G; Qian, Wei-Jun; Smith, Richard DProteomics2012 Apr1074-9222577010
Epigenetic and Neurodevelopmental Perspectives on Variation in Parenting Behavior.Jensen, Catherine L; Champagne, Frances AParenting, science and practice2012 Apr 1202-21123162380
The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity.Barretina, Jordi; Caponigro, Giordano; Stransky, Nicolas; Venkatesan, Kavitha; Margolin, Adam A; Kim, Sungjoon; Wilson, Christopher J; Lehar, Joseph; Kryukov, Gregory V; Sonkin, Dmitriy; Reddy, Anupama; Liu, Manway; Murray, Lauren; Berger, Michael F; MonaNature2012 Mar 29603-722460905
Crystal structure of a concentrative nucleoside transporter from Vibrio cholerae at 2.4ýýýA.Johnson, Zachary Lee; Cheong, Cheom-Gil; Lee, Seok-YongNature2012 Mar 22489-9322407322
Nanoparticles act as protein carriers during cellular internalization.Doorley, Gerard W; Payne, Christine KChemical communications (Cambridge, England)2012 Mar 212961-322328990
Selectivity, directionality, and promiscuity in peptide processing from a Bacillus sp. Al Hakam cyclodehydratase.Melby, Joel O; Dunbar, Kyle L; Trinh, Nhat Q; Mitchell, Douglas AJournal of the American Chemical Society2012 Mar 215309-1622401305
In situ electrokinetic enhancement for self-assembled-monolayer-based electrochemical biosensing.Sin, Mandy L Y; Liu, Tingting; Pyne, Jeffrey D; Gau, Vincent; Liao, Joseph C; Wong, Pak KinAnalytical chemistry2012 Mar 202702-722397486
Genome-wide scans provide evidence for positive selection of genes implicated in Lassa fever.Andersen, Kristian G; Shylakhter, Ilya; Tabrizi, Shervin; Grossman, Sharon R; Happi, Christian T; Sabeti, Pardis CPhilosophical transactions of the Royal Society of London. Series B, Biological sciences2012 Mar 19868-7722312054
Carbon-fiber microelectrode amperometry reveals sickle-cell-induced inflammation and chronic morphine effects on single mast cells.Manning, Benjamin M; Hebbel, Robert P; Gupta, Kalpna; Haynes, Christy LACS chemical biology2012 Mar 16543-5122217155
Current chemical biology approaches to interrogate protein methyltransferases.Luo, MinkuiACS chemical biology2012 Mar 16443-6322220966
Density gradient multilayer polymerization for creating complex tissue.Karpiak, Jerome V; Ner, Yogesh; Almutairi, AdahAdvanced materials (Deerfield Beach, Fla.)2012 Mar 151466-7022318771
Drug-Initiated, Controlled Ring-Opening Polymerization for the Synthesis of Polymer-Drug Conjugates.Tong, Rong; Cheng, JianjunMacromolecules2012 Mar 132225-223223357880
Helical insertion of peptidoglycan produces chiral ordering of the bacterial cell wall.Wang, Siyuan; Furchtgott, Leon; Huang, Kerwyn Casey; Shaevitz, Joshua WProceedings of the National Academy of Sciences of the United States of America2012 Mar 6E595-60422343529
Membrane and nuclear permeabilization by polymeric pDNA vehicles: efficient method for gene delivery or mechanism of cytotoxicity?Grandinetti, Giovanna; Smith, Adam E; Reineke, Theresa MMolecular pharmaceutics2012 Mar 5523-3822175236
Self-folding devices and materials for biomedical applications.Randall, Christina L; Gultepe, Evin; Gracias, David HTrends in biotechnology2012 Mar138-4621764161
Selective patterning of Si-based biosensor surfaces using isotropic silicon etchants.Biggs, Bradley W; Hunt, Heather K; Armani, Andrea MJournal of colloid and interface science2012 Mar 1477-8122196345
Mechanical derivation of functional myotubes from adipose-derived stem cells.Choi, Yu Suk; Vincent, Ludovic G; Lee, Andrew R; Dobke, Marek K; Engler, Adam JBiomaterials2012 Mar2482-9122197570
Multidrug resistance among new tuberculosis cases: detecting local variation through lot quality-assurance sampling.Hedt, Bethany Lynn; van Leth, Frank; Zignol, Matteo; Cobelens, Frank; van Gemert, Wayne; Nhung, Nguyen Viet; Lyepshina, Svitlana; Egwaga, Saidi; Cohen, TedEpidemiology (Cambridge, Mass.)2012 Mar293-30022249242
Variation in maternal and anxiety-like behavior associated with discrete patterns of oxytocin and vasopressin 1a receptor density in the lateral septum.Curley, J P; Jensen, C L; Franks, B; Champagne, F AHormones and behavior2012 Mar454-6122300676
Methylation of H4 lysines 5, 8 and 12 by yeast Set5 calibrates chromatin stress responses.Green, Erin M; Mas, Gloria; Young, Nicolas L; Garcia, Benjamin A; Gozani, OrNature structural & molecular biology2012 Mar361-322343720
Optimizing the specificity of nucleic acid hybridization.Zhang, David Yu; Chen, Sherry Xi; Yin, PengNature chemistry2012 Mar208-1422354435
ATRX-mediated chromatin association of histone variant macroH2A1 regulates ýý-globin expression.Ratnakumar, Kajan; Duarte, Luis F; LeRoy, Gary; Hasson, Dan; Smeets, Daniel; Vardabasso, Chiara; Bonisch, Clemens; Zeng, Tianying; Xiang, Bin; Zhang, David Y; Li, Haitao; Wang, Xiaowo; Hake, Sandra B; Schermelleh, Lothar; Garcia, Benjamin A; Bernstein, EmGenes & development2012 Mar 1433-822391447
Ubiquitin-dependent regulation of COPII coat size and function.Jin, Lingyan; Pahuja, Kanika Bajaj; Wickliffe, Katherine E; Gorur, Amita; Baumgartel, Christine; Schekman, Randy; Rape, MichaelNature2012 Feb 23495-50022358839
Fully automated cellular-resolution vertebrate screening platform with parallel animal processing.Chang, Tsung-Yao; Pardo-Martin, Carlos; Allalou, Amin; Wahlby, Carolina; Yanik, Mehmet FatihLab on a chip2012 Feb 21711-622159032
Drug treatment combined with BCG vaccination reduces disease reactivation in guinea pigs infected with Mycobacterium tuberculosis.Shang, Shaobin; Shanley, Crystal A; Caraway, Megan L; Orme, Eileen A; Henao-Tamayo, Marcela; Hascall-Dove, Laurel; Ackart, David; Orme, Ian M; Ordway, Diane J; Basaraba, Randall JVaccine2012 Feb 211572-8222244979
A neurophysiological-metabolic model for burst suppression.Ching, Shinung; Purdon, Patrick L; Vijayan, Sujith; Kopell, Nancy J; Brown, Emery NProceedings of the National Academy of Sciences of the United States of America2012 Feb 213095-10022323592
Catheter-deliverable hydrogel derived from decellularized ventricular extracellular matrix increases endogenous cardiomyocytes and preserves cardiac function post-myocardial infarction.Singelyn, Jennifer M; Sundaramurthy, Priya; Johnson, Todd D; Schup-Magoffin, Pamela J; Hu, Diane P; Faulk, Denver M; Wang, Jean; Mayle, Kristine M; Bartels, Kendra; Salvatore, Michael; Kinsey, Adam M; Demaria, Anthony N; Dib, Nabil; Christman, Karen LJournal of the American College of Cardiology2012 Feb 21751-6322340268
Reprogramming urokinase into an antibody-recruiting anticancer agent.Jakobsche, Charles E; McEnaney, Patrick J; Zhang, Andrew X; Spiegel, David AACS chemical biology2012 Feb 17316-2122098560
Systemic redox regulation of cellular information processing.Dwivedi, Gaurav; Kemp, Melissa LAntioxidants & redox signaling2012 Feb 15374-8021939387
Ccm3 functions in a manner distinct from Ccm1 and Ccm2 in a zebrafish model of CCM vascular disease.Yoruk, Bilge; Gillers, Benjamin S; Chi, Neil C; Scott, Ian CDevelopmental biology2012 Feb 15121-3122182521
Mouse model of necrotic tuberculosis granulomas develops hypoxic lesions.Harper, Jamie; Skerry, Ciaran; Davis, Stephanie L; Tasneen, Rokeya; Weir, Mariah; Kramnik, Igor; Bishai, William R; Pomper, Martin G; Nuermberger, Eric L; Jain, Sanjay KThe Journal of infectious diseases2012 Feb 15595-60222198962
Strain tunes proteolytic degradation and diffusive transport in fibrin networks.Adhikari, Arjun S; Mekhdjian, Armen H; Dunn, Alexander RBiomacromolecules2012 Feb 13499-50622185486
Global genome organization mediated by RNA polymerase III-transcribed genes in fission yeast.Iwasaki, Osamu; Noma, Ken-ichiGene2012 Feb 10195-20021195141
Integrating technology into health care: what will it take?Wang, C Jason; Huang, Andrew TJAMA : the journal of the American Medical Association2012 Feb 8569-7022318276
A genetic strategy for the dynamic and graded control of cell mechanics, motility, and matrix remodeling.MacKay, Joanna L; Keung, Albert J; Kumar, SanjayBiophysical journal2012 Feb 8434-4222325265
Heterospecific interactions and the proliferation of sexually dimorphic traits.Pfennig, Karin S; Hurlbert, Allen HCurrent zoology2012 Feb 7450-45924639684
Cortical dynein controls microtubule dynamics to generate pulling forces that position microtubule asters.Laan, Liedewij; Pavin, Nenad; Husson, Julien; Romet-Lemonne, Guillaume; van Duijn, Martijn; Lopez, Magdalena Preciado; Vale, Ronald D; Julicher, Frank; Reck-Peterson, Samara L; Dogterom, MarileenCell2012 Feb 3502-1422304918
Mechanisms of vascular endothelial growth factor-induced pathfinding by endothelial sprouts in biomaterials.Shamloo, Amir; Xu, Hui; Heilshorn, SarahTissue engineering. Part A2012 Feb320-3021888475
IgY14 and SuperMix immunoaffinity separations coupled with liquid chromatography-mass spectrometry for human plasma proteomics biomarker discovery.Shi, Tujin; Zhou, Jian-Ying; Gritsenko, Marina A; Hossain, Mahmud; Camp 2nd, David G; Smith, Richard D; Qian, Wei-JunMethods (San Diego, Calif.)2012 Feb246-5321925605
Facile synthesis and altered ionization efficiency of diverse Nýý-alkyllysine-containing peptides.Chakraborty, Debjani; Islam, Kabirul; Luo, MinkuiChemical communications (Cambridge, England)2012 Feb 11514-621959946
Optogenetics and thermogenetics: technologies for controlling the activity of targeted cells within intact neural circuits.Bernstein, Jacob G; Garrity, Paul A; Boyden, Edward SCurrent opinion in neurobiology2012 Feb61-7122119320
Optical highlighter molecules in neurobiology.Datta, Sandeep Robert; Patterson, George HCurrent opinion in neurobiology2012 Feb111-2022129781
Pro-oxidant and antioxidant effects of N-acetylcysteine regulate doxorubicin-induced NF-kappa B activity in leukemic cells.Finn, Nnenna Adimora; Kemp, Melissa LambethMolecular bioSystems2012 Feb650-6222134636
Cationic glycopolymers for the delivery of pDNA to human dermal fibroblasts and rat mesenchymal stem cells.Kizjakina, Karina; Bryson, Joshua M; Grandinetti, Giovanna; Reineke, Theresa MBiomaterials2012 Feb1851-6222138032
Classifying human brain tumors by lipid imaging with mass spectrometry.Eberlin, Livia S; Norton, Isaiah; Dill, Allison L; Golby, Alexandra J; Ligon, Keith L; Santagata, Sandro; Cooks, R Graham; Agar, Nathalie Y RCancer research2012 Feb 1645-5422139378
Magnetoencephalography's higher sensitivity to epileptic spikes may elucidate the profile of electroencephalographically negative epileptic seizures.Kakisaka, Yosuke; Wang, Zhong I; Mosher, John C; Nair, Dileep R; Alexopoulos, Andreas V; Burgess, Richard CEpilepsy & behavior : E&B2012 Feb171-322227034
Dynein achieves processive motion using both stochastic and coordinated stepping.Qiu, Weihong; Derr, Nathan D; Goodman, Brian S; Villa, Elizabeth; Wu, David; Shih, William; Reck-Peterson, Samara LNature structural & molecular biology2012 Feb193-20022231401
Two-photon and second harmonic microscopy in clinical and translational cancer research.Perry, Seth W; Burke, Ryan M; Brown, Edward BAnnals of biomedical engineering2012 Feb277-9122258888
Developmental trajectories of substance use from early adolescence to young adulthood: gender and racial/ethnic differences.Chen, Pan; Jacobson, Kristen CThe Journal of adolescent health : official publication of the Society for Adolescent Medicine2012 Feb154-6322265111
Detection of single fluorescent proteins inside eukaryotic cells using two-photon fluorescence.Hou, Ximiao; Cheng, WeiBiomedical optics express2012 Feb 1340-5322312586
Minimal size of cell assemblies coordinated by gamma oscillations.Borgers, Christoph; Talei Franzesi, Giovanni; Lebeau, Fiona E N; Boyden, Edward S; Kopell, Nancy JPLoS computational biology2012 Febe100236222346741
Advances in wound-healing assays for probing collective cell migration.Riahi, Reza; Yang, Yongliang; Zhang, Donna D; Wong, Pak KinJournal of laboratory automation2012 Feb59-6522357609
Maskless imaging of dense samples using pixel super-resolution based multi-height lensfree on-chip microscopy.Greenbaum, Alon; Ozcan, AydoganOptics express2012 Jan 303129-4322330550
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Multilayer DNA origami packed on hexagonal and hybrid lattices.Ke, Yonggang; Voigt, Niels V; Gothelf, Kurt V; Shih, William MJournal of the American Chemical Society2012 Jan 251770-422187940
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Structural characterisation of Tpx from Yersinia pseudotuberculosis reveals insights into the binding of salicylidene acylhydrazide compounds.Gabrielsen, Mads; Beckham, Katherine S H; Feher, Victoria A; Zetterstrom, Caroline E; Wang, Dai; Muller, Sylke; Elofsson, Mikael; Amaro, Rommie E; Byron, Olwyn; Roe, Andrew JPloS one2012e3221722384182
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High-throughput detection of actionable genomic alterations in clinical tumor samples by targeted, massively parallel sequencing.Wagle, Nikhil; Berger, Michael F; Davis, Matthew J; Blumenstiel, Brendan; Defelice, Matthew; Pochanard, Panisa; Ducar, Matthew; Van Hummelen, Paul; Macconaill, Laura E; Hahn, William C; Meyerson, Matthew; Gabriel, Stacey B; Garraway, Levi ACancer discovery2012 Jan82-9322585170
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New Agilent platform DNA microarrays for transcriptome analysis of Plasmodium falciparum and Plasmodium berghei for the malaria research community.Kafsack, Bjorn F C; Painter, Heather J; Llinas, ManuelMalaria journal201218722681930
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Transgenic APP expression during postnatal development causes persistent locomotor hyperactivity in the adult.Rodgers, Shaefali P; Born, Heather A; Das, Pritam; Jankowsky, Joanna LMolecular neurodegeneration20122822709352
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Small heat shock proteins potentiate amyloid dissolution by protein disaggregases from yeast and humans.Duennwald, Martin L; Echeverria, Analisa; Shorter, JamesPLoS biology2012e100134622723742
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Linking the transcriptional profiles and the physiological states of Mycobacterium tuberculosis during an extended intracellular infection.Rohde, Kyle H; Veiga, Diogo F T; Caldwell, Shannon; Balazsi, Gabor; Russell, David GPLoS pathogens2012e100276922737072
Adjunctive TNF inhibition with standard treatment enhances bacterial clearance in a murine model of necrotic TB granulomas.Skerry, Ciaran; Harper, Jamie; Klunk, Mariah; Bishai, William R; Jain, Sanjay KPloS one2012e3968022761866
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Poly-acetylated chromatin signatures are preferred epitopes for site-specific histone H4 acetyl antibodies.Rothbart, Scott B; Lin, Shu; Britton, Laura-Mae; Krajewski, Krzysztof; Keogh, Michael-C; Garcia, Benjamin A; Strahl, Brian DScientific reports201248922761995
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Multiplexed single-molecule force proteolysis measurements using magnetic tweezers.Adhikari, Arjun S; Chai, Jack; Dunn, Alexander RJournal of visualized experiments : JoVE201222871786
Interplay between the localization and kinetics of phosphorylation in flagellar pole development of the bacterium Caulobacter crescentus.Tropini, Carolina; Huang, Kerwyn CaseyPLoS computational biology2012e100260222876167
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Examining histone posttranslational modification patterns by high-resolution mass spectrometry.Lin, Shu; Garcia, Benjamin AMethods in enzymology20123-2822910200
Aýý alters the connectivity of olfactory neurons in the absence of amyloid plaques in vivo.Cao, Luxiang; Schrank, Benjamin R; Rodriguez, Steve; Benz, Eric G; Moulia, Thomas W; Rickenbacher, Gregory T; Gomez, Alexis C; Levites, Yona; Edwards, Sarah R; Golde, Todd E; Hyman, Bradley T; Barnea, Gilad; Albers, Mark WNature communications2012100922910355
Dynamics of protein noise can distinguish between alternate sources of gene-expression variability.Singh, Abhyudai; Razooky, Brandon S; Dar, Roy D; Weinberger, Leor SMolecular systems biology201260722929617
Giga-pixel lensfree holographic microscopy and tomography using color image sensors.Isikman, Serhan O; Greenbaum, Alon; Luo, Wei; Coskun, Ahmet F; Ozcan, AydoganPloS one2012e4504422984606
Analysis of surface protein expression reveals the growth pattern of the gram-negative outer membrane.Ursell, Tristan S; Trepagnier, Eliane H; Huang, Kerwyn Casey; Theriot, Julie APLoS computational biology2012e100268023028278
FRUIT, a scar-free system for targeted chromosomal mutagenesis, epitope tagging, and promoter replacement in Escherichia coli and Salmonella enterica.Stringer, Anne M; Singh, Navjot; Yermakova, Anastasiya; Petrone, Brianna L; Amarasinghe, Jayaleka J; Reyes-Diaz, Lucia; Mantis, Nicholas J; Wade, Joseph TPloS one2012e4484123028641
Loss of the V-ATPase B1 subunit isoform expressed in non-neuronal cells of the mouse olfactory epithelium impairs olfactory function.Paunescu, Teodor G; Rodriguez, Steven; Benz, Eric; McKee, Mary; Tyszkowski, Robert; Albers, Mark W; Brown, DennisPloS one2012e4539523028982
Inducible control of subcellular RNA localization using a synthetic protein-RNA aptamer interaction.Belmont, Brian J; Niles, Jacquin CPloS one2012e4686823056498
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A mathematical framework for combining decisions of multiple experts toward accurate and remote diagnosis of malaria using tele-microscopy.Mavandadi, Sam; Feng, Steve; Yu, Frank; Dimitrov, Stoyan; Nielsen-Saines, Karin; Prescott, William R; Ozcan, AydoganPloS one2012e4619223071544
Can the energy gap in the protein-ligand binding energy landscape be used as a descriptor in virtual ligand screening?Grigoryan, Arsen V; Wang, Hong; Cardozo, Timothy JPloS one2012e4653223071584
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Theory on the coupled stochastic dynamics of transcription and splice-site recognition.Murugan, Rajamanickam; Kreiman, GabrielPLoS computational biology2012e100274723133354
Impaired skeletal muscle regeneration in the absence of fibrosis during hibernation in 13-lined ground squirrels.Andres-Mateos, Eva; Mejias, Rebeca; Soleimani, Arshia; Lin, Brian M; Burks, Tyesha N; Marx, Ruth; Lin, Benjamin; Zellars, Richard C; Zhang, Yonggang; Huso, David L; Marr, Tom G; Leinwand, Leslie A; Merriman, Dana K; Cohn, Ronald DPloS one2012e4888423155423
Lessons from model organisms: phenotypic robustness and missing heritability in complex disease.Queitsch, Christine; Carlson, Keisha D; Girirajan, SanthoshPLoS genetics2012e100304123166511
Programming stress-induced altruistic death in engineered bacteria.Tanouchi, Yu; Pai, Anand; Buchler, Nicolas E; You, LingchongMolecular systems biology201262623169002
Activity of the mitochondrial calcium uniporter varies greatly between tissues.Fieni, Francesca; Lee, Sung Bae; Jan, Yuh Nung; Kirichok, YuriyNature communications2012131723271651
Calcium wave propagation in networks of endothelial cells: model-based theoretical and experimental study.Long, Juexuan; Junkin, Michael; Wong, Pak Kin; Hoying, James; Deymier, PierrePLoS computational biology2012e100284723300426
Short term interactions with long term consequences: modulation of chimeric vessels by neural progenitors.Williams, Cicely; Rauch, Millicent Ford; Michaud, Michael; Robinson, Rebecca; Xu, Hao; Madri, Joseph; Lavik, ErinPloS one2012e5320823300890
The Genboree Microbiome Toolset and the analysis of 16S rRNA microbial sequences.Riehle, Kevin; Coarfa, Cristian; Jackson, Andrew; Ma, Jun; Tandon, Arpit; Paithankar, Sameer; Raghuraman, Sriram; Mistretta, Toni-Ann; Saulnier, Delphine; Raza, Sabeen; Diaz, Maria Alejandra; Shulman, Robert; Aagaard, Kjersti; Versalovic, James; MilosavljBMC bioinformatics2012S1123320832
Recursive feature elimination for brain tumor classification using desorption electrospray ionization mass spectrometry imaging.Gholami, Behnood; Norton, Isaiah; Tannenbaum, Allen R; Agar, Nathalie Y RConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20125258-6123367115
Beamforming approach to phase-amplitude modulation analysis of multi-channel EEG.Sampson, A L; Babadi, B; Prerau, M J; Mukamel, E A; Brown, E N; Purdon, P LConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20126731-423367474
A fast iterative greedy algorithm for MEG source localization.Obregon-Henao, G; Babadi, B; Lamus, C; Brown, E N; Purdon, P LConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20126748-5123367478
A spatially-regularized dynamic source localization algorithm for EEG.Pirondini, E; Babadi, B; Lamus, C; Brown, E N; Purdon, P LConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20126752-523367479
Epigenetic Modulations of Induced Pluripotent Stem Cells: Novel Therapies and Disease Models.Huang, Chengyang; Wu, Joseph CDrug discovery today. Disease models2012e153-e16023646061
Induced pluripotent stem cell modeling of complex genetic diseases.Hinson, J Travis; Nakamura, Kenta; Wu, Sean MDrug discovery today. Disease models2012e147-e15223690830
Video-rate resonant scanning multiphoton microscopy: An emerging technique for intravital imaging of the tumor microenvironment.Kirkpatrick, Nathaniel D; Chung, Euiheon; Cook, Daniel C; Han, Xiaoxing; Gruionu, Gabriel; Liao, Shan; Munn, Lance L; Padera, Timothy P; Fukumura, Dai; Jain, Rakesh KIntravital (Print)2012NULL24353926
A yeast functional screen predicts new candidate ALS disease genes.Couthouis, Julien; Hart, Michael P; Shorter, James; DeJesus-Hernandez, Mariely; Erion, Renske; Oristano, Rachel; Liu, Annie X; Ramos, Daniel; Jethava, Niti; Hosangadi, Divya; Epstein, James; Chiang, Ashley; Diaz, Zamia; Nakaya, Tadashi; Ibrahim, Fadia; KiProceedings of the National Academy of Sciences of the United States of America2011 Dec 2720881-9022065782
Dysregulation of Kruppel-like factor 4 during brain development leads to hydrocephalus in mice.Qin, Song; Liu, Menglu; Niu, Wenze; Zhang, Chun-LiProceedings of the National Academy of Sciences of the United States of America2011 Dec 2721117-2122160720
Shrink-film configurable multiscale wrinkles for functional alignment of human embryonic stem cells and their cardiac derivatives.Chen, Aaron; Lieu, Deborah K; Freschauf, Lauren; Lew, Valerie; Sharma, Himanshu; Wang, Jiaxian; Nguyen, Diep; Karakikes, Ioannis; Hajjar, Roger J; Gopinathan, Ajay; Botvinick, Elliot; Fowlkes, Charless C; Li, Ronald A; Khine, MichelleAdvanced materials (Deerfield Beach, Fla.)2011 Dec 225785-9122065428
Rapid, multiparameter profiling of cellular secretion using silicon photonic microring resonator arrays.Luchansky, Matthew S; Bailey, Ryan CJournal of the American Chemical Society2011 Dec 2120500-622040005
Ataxia telangiectasia mutated (ATM) modulates long interspersed element-1 (L1) retrotransposition in human neural stem cells.Coufal, Nicole G; Garcia-Perez, Jose Luis; Peng, Grace E; Marchetto, Maria C N; Muotri, Alysson R; Mu, Yangling; Carson, Christian T; Macia, Angela; Moran, John V; Gage, Fred HProceedings of the National Academy of Sciences of the United States of America2011 Dec 2020382-722159035
Generalized Markov Models of Infectious Disease Spread: A Novel Framework for Developing Dynamic Health Policies.Yaesoubi, Reza; Cohen, TedEuropean journal of operational research2011 Dec 16679-68721966083
Mapping personal functional data to personal genomes.Rivas-Astroza, Marcelo; Xie, Dan; Cao, Xiaoyi; Zhong, ShengBioinformatics (Oxford, England)2011 Dec 153427-922006915
Cellular self-organization by autocatalytic alignment feedback.Junkin, Michael; Leung, Siu Ling; Whitman, Samantha; Gregorio, Carol C; Wong, Pak KinJournal of cell science2011 Dec 154213-2022193956
Tailoring material properties of a nanofibrous extracellular matrix derived hydrogel.Johnson, Todd D; Lin, Stephen Y; Christman, Karen LNanotechnology2011 Dec 949401522101810
In situ mechanical analysis of myofibrillar perturbation and aging on soft, bilayered Drosophila myocardium.Kaushik, Gaurav; Fuhrmann, Alexander; Cammarato, Anthony; Engler, Adam JBiophysical journal2011 Dec 72629-3722261050
GE Prize essay. Zoom!Lieberman Aiden, ErezScience (New York, N.Y.)2011 Dec 21222-322144611
β-Adrenergic receptors (β-AR) regulate VEGF and IL-6 production by divergent pathways in high β-AR-expressing breast cancer cell lines.Madden, Kelley S; Szpunar, Mercedes J; Brown, Edward BBreast cancer research and treatment2011 Dec747-5821234673
Gut-tropic T cells that express integrin *4*7 and CCR9 are required for induction of oral immune tolerance in mice.Cassani, Barbara; Villablanca, Eduardo J; Quintana, Francisco J; Love, Paul E; Lacy-Hulbert, Adam; Blaner, William S; Sparwasser, Tim; Snapper, Scott B; Weiner, Howard L; Mora, J RodrigoGastroenterology2011 Dec2109-1821925467
Manipulating substrate and pH in zymography protocols selectively distinguishes cathepsins K, L, S, and V activity in cells and tissues.Wilder, Catera L; Park, Keon-Young; Keegan, Philip M; Platt, Manu OArchives of biochemistry and biophysics2011 Dec 152-721982919
18O-labeled proteome reference as global internal standards for targeted quantification by selected reaction monitoring-mass spectrometry.Kim, Jong-Seo; Fillmore, Thomas L; Liu, Tao; Robinson, Errol; Hossain, Mahmud; Champion, Boyd L; Moore, Ronald J; Camp 2nd, David G; Smith, Richard D; Qian, Wei-JunMolecular & cellular proteomics : MCP2011 DecM110.00730221988777
Autocrine endothelin-3/endothelin receptor B signaling maintains cellular and molecular properties of glioblastoma stem cells.Liu, Yue; Ye, Fei; Yamada, Kazunari; Tso, Jonathan L; Zhang, Yibei; Nguyen, David H; Dong, Qinghua; Soto, Horacio; Choe, Jinny; Dembo, Anna; Wheeler, Hayley; Eskin, Ascia; Schmid, Ingrid; Yong, William H; Mischel, Paul S; Cloughesy, Timothy F; Kornblum, HMolecular cancer research : MCR2011 Dec1668-8522013079
Self-assembling enzymes and the origins of the cytoskeleton.Barry, Rachael M; Gitai, ZemerCurrent opinion in microbiology2011 Dec704-1122014508
Optogenetic tools for analyzing the neural circuits of behavior.Bernstein, Jacob G; Boyden, Edward STrends in cognitive sciences2011 Dec592-60022055387
Using light to see and control membrane traffic.Xu, Yingke; Melia, Thomas J; Toomre, Derek KCurrent opinion in chemical biology2011 Dec822-3022079055
Measuring intranodal pressure and lymph viscosity to elucidate mechanisms of arthritic flare and therapeutic outcomes.Bouta, Echoe M; Wood, Ronald W; Perry, Seth W; Brown, Edward B; Ritchlin, Christopher T; Xing, Lianping; Schwarz, Edward MAnnals of the New York Academy of Sciences2011 Dec47-5222172039
One size may not fit all: anti-aging therapies and sarcopenia.Burks, Tyesha N; Cohn, Ronald DAging2011 Dec1142-5322184279
Partially coherent lensfree tomographic microscopy [Invited].Isikman, Serhan O; Bishara, Waheb; Ozcan, AydoganApplied optics2011 Dec 1H253-6422193016
Ror2 enhances polarity and directional migration of primordial germ cells.Laird, Diana J; Altshuler-Keylin, Svetlana; Kissner, Michael D; Zhou, Xin; Anderson, Kathryn VPLoS genetics2011 Dece100242822216013
A common repressor pool results in indeterminacy of extrinsic noise.Stamatakis, Michail; Adams, Rhys M; Balazsi, GaborChaos (Woodbury, N.Y.)2011 Dec04752322225397
Wafer Scale Integration of CMOS Chips for Biomedical Applications via Self-Aligned Masking.Uddin, Ashfaque; Milaninia, Kaveh; Chen, Chin-Hsuan; Theogarajan, LukeIEEE transactions on components, packaging, and manufacturing technology2011 Dec 11996-200422400126
A spatiotemporal dynamic distributed solution to the MEG inverse problem.Lamus, Camilo; Hamalainen, Matti S; Temereanca, Simona; Brown, Emery N; Purdon, Patrick LNeuroImage2011 Nov 3022155043
SnapShot: Light microscopy.Kasper, Robert; Huang, BoCell2011 Nov 231198.e122118471
NSD2 links dimethylation of histone H3 at lysine 36 to oncogenic programming.Kuo, Alex J; Cheung, Peggie; Chen, Kaifu; Zee, Barry M; Kioi, Mitomu; Lauring, Josh; Xi, Yuanxin; Park, Ben Ho; Shi, Xiaobing; Garcia, Benjamin A; Li, Wei; Gozani, OrMolecular cell2011 Nov 18609-2022099308
Bacteroides in the infant gut consume milk oligosaccharides via mucus-utilization pathways.Marcobal, Angela; Barboza, Mariana; Sonnenburg, Erica D; Pudlo, Nicholas; Martens, Eric C; Desai, Prerak; Lebrilla, Carlito B; Weimer, Bart C; Mills, David A; German, J Bruce; Sonnenburg, Justin LCell host & microbe2011 Nov 17507-1422036470
Desorption electrospray ionization then MALDI mass spectrometry imaging of lipid and protein distributions in single tissue sections.Eberlin, Livia S; Liu, Xiaohui; Ferreira, Christina R; Santagata, Sandro; Agar, Nathalie Y R; Cooks, R GrahamAnalytical chemistry2011 Nov 158366-7121975048
On-chip evaluation of shear stress effect on cytotoxicity of mesoporous silica nanoparticles.Kim, Donghyuk; Lin, Yu-Shen; Haynes, Christy LAnalytical chemistry2011 Nov 158377-8222032307
Cdk1 phosphorylation of the kinetochore protein Nsk1 prevents error-prone chromosome segregation.Chen, Jun-Song; Lu, Lucy X; Ohi, Melanie D; Creamer, Kevin M; English, Chauca; Partridge, Janet F; Ohi, Ryoma; Gould, Kathleen LThe Journal of cell biology2011 Nov 14583-9322065639
Systematic discovery of TLR signaling components delineates viral-sensing circuits.Chevrier, Nicolas; Mertins, Philipp; Artyomov, Maxim N; Shalek, Alex K; Iannacone, Matteo; Ciaccio, Mark F; Gat-Viks, Irit; Tonti, Elena; DeGrace, Marciela M; Clauser, Karl R; Garber, Manuel; Eisenhaure, Thomas M; Yosef, Nir; Robinson, Jacob; Sutton, Amy;Cell2011 Nov 11853-6722078882
Toward tunable band gap and tunable dirac point in bilayer graphene with molecular doping.Yu, Woo Jong; Liao, Lei; Chae, Sang Hoon; Lee, Young Hee; Duan, XiangfengNano letters2011 Nov 94759-6321985035
Face recognition: vision and emotions beyond the bubble.Tang, Hanlin; Kreiman, GabrielCurrent biology : CB2011 Nov 8R888-9022075428
Human cardiomyogenesis and the need for systems biology analysis.Young, D Adam; DeQuach, Jessica A; Christman, Karen LWiley interdisciplinary reviews. Systems biology and medicine2011 Nov-Dec666-8021197666
Assessing spatiotemporal patterns of multidrug-resistant and drug-sensitive tuberculosis in a South American setting.Lin, H; Shin, S; Blaya, J A; Zhang, Z; Cegielski, P; Contreras, C; Asencios, L; Bonilla, C; Bayona, J; Paciorek, C J; Cohen, TEpidemiology and infection2011 Nov1784-9321205434
Model organisms reveal insight into human neurodegenerative disease: ataxin-2 intermediate-length polyglutamine expansions are a risk factor for ALS.Bonini, Nancy M; Gitler, Aaron DJournal of molecular neuroscience : MN2011 Nov676-8321660502
Elucidating the mechanobiology of malignant brain tumors using a brain matrix-mimetic hyaluronic acid hydrogel platform.Ananthanarayanan, Badriprasad; Kim, Yushan; Kumar, SanjayBiomaterials2011 Nov7913-2321820737
Formulating a fluorogenic assay to evaluate S-adenosyl-L-methionine analogues as protein methyltransferase cofactors.Wang, Rui; Ibanez, Glorymar; Islam, Kabirul; Zheng, Weihong; Blum, Gil; Sengelaub, Caitlin; Luo, MinkuiMolecular bioSystems2011 Nov2970-8121866297
Decellularized porcine brain matrix for cell culture and tissue engineering scaffolds.DeQuach, Jessica A; Yuan, Shauna H; Goldstein, Lawrence S B; Christman, Karen LTissue engineering. Part A2011 Nov2583-9221883047
Site-specific recombinase strategy to create induced pluripotent stem cells efficiently with plasmid DNA.Karow, Marisa; Chavez, Christopher L; Farruggio, Alfonso P; Geisinger, Jonathan M; Keravala, Annahita; Jung, W Edward; Lan, Feng; Wu, Joseph C; Chen-Tsai, Yanru; Calos, Michele PStem cells (Dayton, Ohio)2011 Nov1696-70421898697
The tumor suppressor adenomatous polyposis coli controls the direction in which a cell extrudes from an epithelium.Marshall, Thomas W; Lloyd, Isaac E; Delalande, Jean Marie; Nathke, Inke; Rosenblatt, JodyMolecular biology of the cell2011 Nov3962-7021900494
RF1 knockout allows ribosomal incorporation of unnatural amino acids at multiple sites.Johnson, David B F; Xu, Jianfeng; Shen, Zhouxin; Takimoto, Jeffrey K; Schultz, Matthew D; Schmitz, Robert J; Xiang, Zheng; Ecker, Joseph R; Briggs, Steven P; Wang, LeiNature chemical biology2011 Nov779-8621926996
Maternal tobacco use modestly alters correlated epigenome-wide placental DNA methylation and gene expression.Suter, Melissa; Ma, Jun; Harris, Alan; Patterson, Lauren; Brown, Kathleen A; Shope, Cynthia; Showalter, Lori; Abramovici, Adi; Aagaard-Tillery, Kjersti MEpigenetics : official journal of the DNA Methylation Society2011 Nov1284-9421937876
Different cortical involvement pattern of generalized and localized spasms: a magnetoencephalography study.Kakisaka, Yosuke; Gupta, Ajay; Wang, Zhong I; Dubarry, Anne-Sophie; Alexopoulos, Andreas V; Mosher, John C; Burgess, Richard CEpilepsy & behavior : E&B2011 Nov599-60121944062
Global hormone profiling of murine placenta reveals Secretin expression.Knox, K; Leuenberger, D; Penn, A A; Baker, J CPlacenta2011 Nov811-621944867
Affinity-based proteomics reveal cancer-specific networks coordinated by Hsp90.Moulick, Kamalika; Ahn, James H; Zong, Hongliang; Rodina, Anna; Cerchietti, Leandro; Gomes DaGama, Erica M; Caldas-Lopes, Eloisi; Beebe, Kristin; Perna, Fabiana; Hatzi, Katerina; Vu, Ly P; Zhao, Xinyang; Zatorska, Danuta; Taldone, Tony; Smith-Jones, PeterNature chemical biology2011 Nov818-2621946277
Rho GTPases mediate the mechanosensitive lineage commitment of neural stem cells.Keung, Albert J; de Juan-Pardo, Elena M; Schaffer, David V; Kumar, SanjayStem cells (Dayton, Ohio)2011 Nov1886-9721956892
K11-linked ubiquitin chains as novel regulators of cell division.Wickliffe, Katherine E; Williamson, Adam; Meyer, Hermann-Josef; Kelly, Aileen; Rape, MichaelTrends in cell biology2011 Nov656-6321978762
Vascular endothelial and endocardial progenitors differentiate as cardiomyocytes in the absence of Etsrp/Etv2 function.Palencia-Desai, Sharina; Kohli, Vikram; Kang, Jione; Chi, Neil C; Black, Brian L; Sumanas, SauliusDevelopment (Cambridge, England)2011 Nov4721-3221989916
Modeling the pharmacodynamics of passive membrane permeability.Swift, Robert V; Amaro, Rommie EJournal of computer-aided molecular design2011 Nov1007-1722042376
Prefrontal cortex and executive function impairments in primary breast cancer.Kesler, Shelli R; Kent, Jamie S; O'Hara, RuthArchives of neurology2011 Nov1447-5322084128
Multiresidue pesticide analysis in ginseng and spinach by nontargeted and targeted screening procedures.Hayward, Douglas G; Wong, Jon W; Zhang, Kai; Chang, James; Shi, Feng; Banerjee, Kaushik; Yang, PaulJournal of AOAC International2011 Nov-Dec1741-5122320080
Translational regulation in nutrigenomics.Liu, Botao; Qian, Shu-BingAdvances in nutrition (Bethesda, Md.)2011 Nov511-922332093
Plasmonic enhancements of photocatalytic activity of Pt/n-Si/Ag photodiodes using Au/Ag core/shell nanorods.Qu, Yongquan; Cheng, Rui; Su, Qiao; Duan, XiangfengJournal of the American Chemical Society2011 Oct 2616730-321961900
Eating for two: how metabolism establishes interspecies interactions in the gut.Fischbach, Michael A; Sonnenburg, Justin LCell host & microbe2011 Oct 20336-4722018234
Characterization of the functional MRI response temporal linearity via optical control of neocortical pyramidal neurons.Kahn, Itamar; Desai, Mitul; Knoblich, Ulf; Bernstein, Jacob; Henninger, Michael; Graybiel, Ann M; Boyden, Edward S; Buckner, Randy L; Moore, Christopher IThe Journal of neuroscience : the official journal of the Society for Neuroscience2011 Oct 1915086-9122016542
Mediator coordinates PIC assembly with recruitment of CHD1.Lin, Justin J; Lehmann, Lynn W; Bonora, Giancarlo; Sridharan, Rupa; Vashisht, Ajay A; Tran, Nancy; Plath, Kathrin; Wohlschlegel, James A; Carey, MichaelGenes & development2011 Oct 152198-20921979373
RUNX1 and its understudied role in breast cancer.Janes, Kevin ACell cycle (Georgetown, Tex.)2011 Oct 153461-522024923
Synthesis of hybrid block copolymers via integrated ring-opening metathesis polymerization and polymerization of NCA.Bai, Yugang; Lu, Hua; Ponnusamy, Ettigounder; Cheng, JianjunChemical communications (Cambridge, England)2011 Oct 1410830-221869956
A reserve stem cell population in small intestine renders Lgr5-positive cells dispensable.Tian, Hua; Biehs, Brian; Warming, Soren; Leong, Kevin G; Rangell, Linda; Klein, Ophir D; de Sauvage, Frederic JNature2011 Oct 13255-921927002
Molecular-level engineering of protein physical hydrogels for predictive sol-gel phase behavior.Mulyasasmita, Widya; Lee, Ji Seok; Heilshorn, Sarah CBiomacromolecules2011 Oct 103406-1121861461
Modelling the performance of isoniazid preventive therapy for reducing tuberculosis in HIV endemic settings: the effects of network structure.Mills, H L; Cohen, T; Colijn, CJournal of the Royal Society, Interface / the Royal Society2011 Oct 71510-2021508012
Identification of a conserved glycan signature for microvesicles.Batista, Bianca S; Eng, William S; Pilobello, Kanoelani T; Hendricks-Munoz, Karen D; Mahal, Lara KJournal of proteome research2011 Oct 74624-3321859146
Porous silicon nanowires.Qu, Yongquan; Zhou, Hailong; Duan, XiangfengNanoscale2011 Oct 54060-821869999
Computational design of a collagen A:B:C-type heterotrimer.Xu, Fei; Zahid, Sohail; Silva, Teresita; Nanda, VikasJournal of the American Chemical Society2011 Oct 515260-321902217
Intersection of FOXO- and RUNX1-mediated gene expression programs in single breast epithelial cells during morphogenesis and tumor progression.Wang, Lixin; Brugge, Joan S; Janes, Kevin AProceedings of the National Academy of Sciences of the United States of America2011 Oct 4E803-1221873240
Genome sequencing of mouse induced pluripotent stem cells reveals retroelement stability and infrequent DNA rearrangement during reprogramming.Quinlan, Aaron R; Boland, Michael J; Leibowitz, Mitchell L; Shumilina, Svetlana; Pehrson, Sidney M; Baldwin, Kristin K; Hall, Ira MCell stem cell2011 Oct 4366-7321982236
Interaction of poly(ethylenimine)-DNA polyplexes with mitochondria: implications for a mechanism of cytotoxicity.Grandinetti, Giovanna; Ingle, Nilesh P; Reineke, Theresa MMolecular pharmaceutics2011 Oct 31709-1921699201
Synergistic induction of apoptosis in brain cancer cells by targeted codelivery of siRNA and anticancer drugs.Kim, Cheoljin; Shah, Birju P; Subramaniam, Prasad; Lee, Ki-BumMolecular pharmaceutics2011 Oct 31955-6121793576
On the use of micron-sized iron oxide particles (MPIOS) to label resting monocytes in bone marrow.Tang, Kevin S; Hann, Bradley; Shapiro, Erik MMolecular imaging and biology : MIB : the official publication of the Academy of Molecular Imaging2011 Oct819-2420936363
Functional characterization and expression profiling of human induced pluripotent stem cell- and embryonic stem cell-derived endothelial cells.Li, Zongjin; Hu, Shijun; Ghosh, Zhumur; Han, Zhongchao; Wu, Joseph CStem cells and development2011 Oct1701-1021235328
Structural characterization and MHCII-dependent immunological properties of the zwitterionic O-chain antigen of Morganella morganii.Young, N Martin; Kreisman, Lori S C; Stupak, Jacek; MacLean, Leann L; Cobb, Brian A; Richards, James CGlycobiology2011 Oct1266-7621321054
More than a feeling: discovering, understanding, and influencing mechanosensing pathways.Holle, Andrew W; Engler, Adam JCurrent opinion in biotechnology2011 Oct648-5421536426
Patient-to-patient variability in autologous pericardial matrix scaffolds for cardiac repair.Seif-Naraghi, Sonya B; Horn, Dinah; Schup-Magoffin, Pam A; Madani, Michael M; Christman, Karen LJournal of cardiovascular translational research2011 Oct545-5621695575
Genome-wide array-based copy number profiling in human placentas from unexplained stillbirths.Harris, R Alan; Ferrari, Francesca; Ben-Shachar, Shay; Wang, Xiaoling; Saade, George; Van Den Veyver, Ignatia; Facchinetti, Fabio; Aagaard-Tillery, KjerstiPrenatal diagnosis2011 Oct932-4421732394
Electroanalytical eavesdropping on single cell communication.Kim, Donghyuk; Koseoglu, Secil; Manning, Benjamin M; Meyer, Audrey F; Haynes, Christy LAnalytical chemistry2011 Oct 17242-921766792
A new evolutionary and pharmacokinetic-pharmacodynamic scenario for rapid emergence of resistance to single and multiple anti-tuberculosis drugs.Pasipanodya, Jotam G; Gumbo, TawandaCurrent opinion in pharmacology2011 Oct457-6321807559
Microtopographical assembly of cardiomyocytes.Patel, Anuj A; Desai, Tejal A; Kumar, SanjayIntegrative biology : quantitative biosciences from nano to macro2011 Oct1011-921863181
Combination therapies for combating antimicrobial resistance.Fischbach, Michael ACurrent opinion in microbiology2011 Oct519-2321900036
Child psychopathic traits moderate relationships between parental affect and child aggression.Yeh, Michelle T; Chen, Pan; Raine, Adrian; Baker, Laura A; Jacobson, Kristen CJournal of the American Academy of Child and Adolescent Psychiatry2011 Oct1054-6421961779
Breaking the histone code with quantitative mass spectrometry.Britton, Laura-Mae P; Gonzales-Cope, Michelle; Zee, Barry M; Garcia, Benjamin AExpert review of proteomics2011 Oct631-4321999833
Ensemble-based computational approach discriminates functional activity of p53 cancer and rescue mutants.Demir, Ozlem; Baronio, Roberta; Salehi, Faezeh; Wassman, Christopher D; Hall, Linda; Hatfield, G Wesley; Chamberlin, Richard; Kaiser, Peter; Lathrop, Richard H; Amaro, Rommie EPLoS computational biology2011 Octe100223822028641
Real-time monitoring of surface-initiated atom transfer radical polymerization using silicon photonic microring resonators: implications for combinatorial screening of polymer brush growth conditions.Limpoco, F Ted; Bailey, Ryan CJournal of the American Chemical Society2011 Sep 2814864-721899288
Activation of postnatal neural stem cells requires nuclear receptor TLX.Niu, Wenze; Zou, Yuhua; Shen, Chengcheng; Zhang, Chun-LiThe Journal of neuroscience : the official journal of the Society for Neuroscience2011 Sep 2813816-2821957244
A doublet microlens array for imaging micron-sized objects.Tripathi, A; Chronis, NJournal of micromechanics and microengineering : structures, devices, and systems2011 Sep 2122003271
Human defensin 5 disulfide array mutants: disulfide bond deletion attenuates antibacterial activity against Staphylococcus aureus.Wanniarachchi, Yoshitha A; Kaczmarek, Piotr; Wan, Andrea; Nolan, Elizabeth MBiochemistry2011 Sep 208005-1721861459
The bacterial actin MreB rotates, and rotation depends on cell-wall assembly.van Teeffelen, Sven; Wang, Siyuan; Furchtgott, Leon; Huang, Kerwyn Casey; Wingreen, Ned S; Shaevitz, Joshua W; Gitai, ZemerProceedings of the National Academy of Sciences of the United States of America2011 Sep 2015822-721903929
Preclinical derivation and imaging of autologously transplanted canine induced pluripotent stem cells.Lee, Andrew S; Xu, Dan; Plews, Jordan R; Nguyen, Patricia K; Nag, Divya; Lyons, Jennifer K; Han, Leng; Hu, Shijun; Lan, Feng; Liu, Junwei; Huang, Mei; Narsinh, Kazim H; Long, Charles T; de Almeida, Patricia E; Levi, Benjamin; Kooreman, Nigel; Bangs, CharlThe Journal of biological chemistry2011 Sep 1632697-70421719696
Synthesis of purine-scaffold fluorescent probes for heat shock protein 90 with use in flow cytometry and fluorescence microscopy.Taldone, Tony; Gomes-DaGama, Erica M; Zong, Hongliang; Sen, Siddhartha; Alpaugh, Mary L; Zatorska, Danuta; Alonso-Sabadell, Raul; Guzman, Monica L; Chiosis, GabrielaBioorganic & medicinal chemistry letters2011 Sep 155347-5221802945
Water-Soluble Polypeptides with Elongated, Charged Side Chains Adopt Ultra-Stable Helical Conformations.Zhang, Yanfeng; Lu, Hua; Lin, Yao; Cheng, JianjunMacromolecules2011 Sep 136641-664422049249
Quantitative assessment of masking of neutralization epitopes in HIV-1.Agarwal, Alpna; Hioe, Catarina E; Swetnam, James; Zolla-Pazner, Susan; Cardozo, TimothyVaccine2011 Sep 96736-4121216319
Multiplexed evaluation of capture agent binding kinetics using arrays of silicon photonic microring resonators.Byeon, Ji-Yeon; Bailey, Ryan CThe Analyst2011 Sep 73430-321085731
Single particle tracking as a method to resolve differences in highly colocalized proteins.Szymanski, Craig J; Humphries 4th, William H; Payne, Christine KThe Analyst2011 Sep 73527-3321283889
Wide-field lensless fluorescent microscopy using a tapered fiber-optic faceplate on a chip.Coskun, Ahmet F; Sencan, Ikbal; Su, Ting-Wei; Ozcan, AydoganThe Analyst2011 Sep 73512-821283900
The architecture of CopA from Archeaoglobus fulgidus studied by cryo-electron microscopy and computational docking.Allen, Gregory S; Wu, Chen-Chou; Cardozo, Tim; Stokes, David LStructure (London, England : 1993)2011 Sep 71219-3221820315
Investigating endogenous peptides and peptidases using peptidomics.Tinoco, Arthur D; Saghatelian, AlanBiochemistry2011 Sep 67447-6121786763
A fluorescent reporter of the phosphorylation status of the substrate protein STAT3.Lacey, Vanessa K; Parrish, Angela R; Han, Shuliang; Shen, Zhouxin; Briggs, Steven P; Ma, Yuguo; Wang, LeiAngewandte Chemie (International ed. in English)2011 Sep 58692-621805546
Adaptive immune defects against glycoantigens in chronic granulomatous disease via dysregulated nitric oxide production.Lewis, Colleen J; Cobb, Brian AEuropean journal of immunology2011 Sep2562-7221630251
MicroRNA-146a inhibits glioma development by targeting Notch1.Mei, Jie; Bachoo, Robert; Zhang, Chun-LiMolecular and cellular biology2011 Sep3584-9221730286
Increased Foxp3 expression in guinea pigs infected with W-Beijing strains of M. tuberculosis.Shang, Shaobin; Harton, Marisa; Tamayo, Marcela Henao; Shanley, Crystal; Palanisamy, Gopinath S; Caraway, Megan; Chan, Edward D; Basaraba, Randall J; Orme, Ian M; Ordway, Diane JTuberculosis (Edinburgh, Scotland)2011 Sep378-8521737349
Optofluidic fluorescent imaging cytometry on a cell phone.Zhu, Hongying; Mavandadi, Sam; Coskun, Ahmet F; Yaglidere, Oguzhan; Ozcan, AydoganAnalytical chemistry2011 Sep 16641-721774454
Chaperone-mediated hierarchical control in targeting misfolded proteins to aggresomes.Zhang, Xingqian; Qian, Shu-BingMolecular biology of the cell2011 Sep3277-8821775628
Mycobacterium bovis BCG-mediated protection against W-Beijing strains of Mycobacterium tuberculosis is diminished concomitant with the emergence of regulatory T cells.Ordway, Diane J; Shang, Shaobin; Henao-Tamayo, Marcela; Obregon-Henao, Andres; Nold, Laura; Caraway, Megan; Shanley, Crystal A; Basaraba, Randall J; Duncan, Colleen G; Orme, Ian MClinical and vaccine immunology : CVI2011 Sep1527-3521795460
Maternal tobacco use is associated with increased markers of oxidative stress in the placenta.Sbrana, Elena; Suter, Melissa A; Abramovici, Adi R; Hawkins, Hal K; Moss, Joan E; Patterson, Lauren; Shope, Cynthia; Aagaard-Tillery, KjerstiAmerican journal of obstetrics and gynecology2011 Sep246.e1-721803321
Streptolysin S-like virulence factors: the continuing sagA.Molloy, Evelyn M; Cotter, Paul D; Hill, Colin; Mitchell, Douglas A; Ross, R PaulNature reviews. Microbiology2011 Sep670-8121822292
Strain-dependent CNS dissemination in guinea pigs after Mycobacterium tuberculosis aerosol challenge.Be, Nicholas A; Klinkenberg, Lee G; Bishai, William R; Karakousis, Petros C; Jain, Sanjay KTuberculosis (Edinburgh, Scotland)2011 Sep386-921831713
Regulation of tooth number by fine-tuning levels of receptor-tyrosine kinase signaling.Charles, Cyril; Hovorakova, Maria; Ahn, Youngwook; Lyons, David B; Marangoni, Pauline; Churava, Svatava; Biehs, Brian; Jheon, Andrew; Lesot, Herve; Balooch, Guive; Krumlauf, Robb; Viriot, Laurent; Peterkova, Renata; Klein, Ophir DDevelopment (Cambridge, England)2011 Sep4063-7321862563
A switching mechanism in doxorubicin bioactivation can be exploited to control doxorubicin toxicity.Finn, Nnenna A; Findley, Harry W; Kemp, Melissa LPLoS computational biology2011 Sepe100215121935349
Filament depolymerization can explain chromosome pulling during bacterial mitosis.Banigan, Edward J; Gelbart, Michael A; Gitai, Zemer; Wingreen, Ned S; Liu, Andrea JPLoS computational biology2011 Sepe100214521966261
A conserved PHD finger protein and endogenous RNAi modulate insulin signaling in Caenorhabditis elegans.Mansisidor, Andres R; Cecere, Germano; Hoersch, Sebastian; Jensen, Morten B; Kawli, Trupti; Kennedy, Lisa M; Chavez, Violeta; Tan, Man-Wah; Lieb, Jason D; Grishok, AllaPLoS genetics2011 Sepe100229921980302
Field-portable reflection and transmission microscopy based on lensless holography.Lee, Myungjun; Yaglidere, Oguzhan; Ozcan, AydoganBiomedical optics express2011 Sep 12721-3021991559
Lensfree super-resolution holographic microscopy using wetting films on a chip.Mudanyali, Onur; Bishara, Waheb; Ozcan, AydoganOptics express2011 Aug 2917378-8921935102
Exome sequencing and analysis of induced pluripotent stem cells identify the cilia-related gene male germ cell-associated kinase (MAK) as a cause of retinitis pigmentosa.Tucker, Budd A; Scheetz, Todd E; Mullins, Robert F; DeLuca, Adam P; Hoffmann, Jeremy M; Johnston, Rebecca M; Jacobson, Samuel G; Sheffield, Val C; Stone, Edwin MProceedings of the National Academy of Sciences of the United States of America2011 Aug 23E569-7621825139
Ring-Opening Polymerization of ýý-(4-Vinylbenzyl)-(L)-Glutamate N-Carboxyanhydride for the Synthesis of Functional Polypeptides.Lu, Hua; Bai, Yugang; Wang, Jing; Gabrielson, Nathan P; Wang, Fei; Lin, Yao; Cheng, JianjunMacromolecules2011 Aug 236237-624022121300
Photo-cross-linkers incorporated into G-protein-coupled receptors in mammalian cells: a ligand comparison.Coin, Irene; Perrin, Marilyn H; Vale, Wylie W; Wang, LeiAngewandte Chemie (International ed. in English)2011 Aug 228077-8121751313
Combined reflection and transmission microscope for telemedicine applications in field settings.Biener, Gabriel; Greenbaum, Alon; Isikman, Serhan O; Lee, Kelvin; Tseng, Derek; Ozcan, AydoganLab on a chip2011 Aug 212738-4321709875
Molecular detection of bacterial pathogens using microparticle enhanced double-stranded DNA probes.Riahi, Reza; Mach, Kathleen E; Mohan, Ruchika; Liao, Joseph C; Wong, Pak KinAnalytical chemistry2011 Aug 156349-5421718053
Discovery of 1,2,4-thiadiazolidine-3,5-dione analogs that exhibit unusual and selective rapid cell death kinetics against acute myelogenous leukemia cells in culture.Nasim, Shama; Guzman, Monica L; Jordan, Craig T; Crooks, Peter ABioorganic & medicinal chemistry letters2011 Aug 154879-8321757349
Enantiospecific synthesis of genetically encodable fluorescent unnatural amino acid L-3-(6-acetylnaphthalen-2-ylamino)-2-aminopropanoic acid.Xiang, Zheng; Wang, LeiThe Journal of organic chemistry2011 Aug 56367-7121732687
Mitochondrial uncoupling protein 2 structure determined by NMR molecular fragment searching.Berardi, Marcelo J; Shih, William M; Harrison, Stephen C; Chou, James JNature2011 Aug 4109-1321785437
A substrate-free activity-based protein profiling screen for the discovery of selective PREPL inhibitors.Lone, Anna Mari; Bachovchin, Daniel A; Westwood, David B; Speers, Anna E; Spicer, Timothy P; Fernandez-Vega, Virneliz; Chase, Peter; Hodder, Peter S; Rosen, Hugh; Cravatt, Benjamin F; Saghatelian, AlanJournal of the American Chemical Society2011 Aug 311665-7421692504
3-D reconstruction of microtubules from multi-angle total internal reflection fluorescence microscopy using Bayesian framework.Yang, Qian; Karpikov, Alexander; Toomre, Derek; Duncan, James SIEEE transactions on image processing : a publication of the IEEE Signal Processing Society2011 Aug2248-5921324778
Epigenetic perspective on the developmental effects of bisphenol A.Kundakovic, Marija; Champagne, Frances ABrain, behavior, and immunity2011 Aug1084-9321333735
Dissecting therapeutic resistance to RAF inhibition in melanoma by tumor genomic profiling.Wagle, Nikhil; Emery, Caroline; Berger, Michael F; Davis, Matthew J; Sawyer, Allison; Pochanard, Panisa; Kehoe, Sarah M; Johannessen, Cory M; Macconaill, Laura E; Hahn, William C; Meyerson, Matthew; Garraway, Levi AJournal of clinical oncology : official journal of the American Society of Clinical Oncology2011 Aug 13085-9621383288
Processive ubiquitin chain formation by the anaphase-promoting complex.Meyer, Hermann-Josef; Rape, MichaelSeminars in cell & developmental biology2011 Aug544-5021477659
Revealing histone variant induced changes via quantitative proteomics.Arnaudo, Anna M; Molden, Rosalynn C; Garcia, Benjamin ACritical reviews in biochemistry and molecular biology2011 Aug284-9421526979
Serial monitoring of endogenous neuroblast migration by cellular MRI.Granot, Dorit; Scheinost, Dustin; Markakis, Eleni A; Papademetris, Xenios; Shapiro, Erik MNeuroImage2011 Aug 1817-2421571076
Microscale mechanisms of agarose-induced disruption of collagen remodeling.Ulrich, Theresa A; Lee, Tae Geol; Shon, Hyun Kyong; Moon, Dae Won; Kumar, SanjayBiomaterials2011 Aug5633-4221575987
Genetically encoding unnatural amino acids in neural stem cells and optically reporting voltage-sensitive domain changes in differentiated neurons.Shen, Bin; Xiang, Zheng; Miller, Barbara; Louie, Gordon; Wang, Wenyuan; Noel, Joseph P; Gage, Fred H; Wang, LeiStem cells (Dayton, Ohio)2011 Aug1231-4021681861
A wirelessly powered and controlled device for optical neural control of freely-behaving animals.Wentz, Christian T; Bernstein, Jacob G; Monahan, Patrick; Guerra, Alexander; Rodriguez, Alex; Boyden, Edward SJournal of neural engineering2011 Aug04602121701058
High-throughput mapping of the promoters of the mouse olfactory receptor genes reveals a new type of mammalian promoter and provides insight into olfactory receptor gene regulation.Clowney, E Josephine; Magklara, Angeliki; Colquitt, Bradley M; Pathak, Nidhi; Lane, Robert P; Lomvardas, StavrosGenome research2011 Aug1249-5921705439
Anti-DNA:RNA antibodies and silicon photonic microring resonators: increased sensitivity for multiplexed microRNA detection.Qavi, Abraham J; Kindt, Jared T; Gleeson, Martin A; Bailey, Ryan CAnalytical chemistry2011 Aug 15949-5621711056
Face-selective electrostatic control of hydrothermal zinc oxide nanowire synthesis.Joo, Jaebum; Chow, Brian Y; Prakash, Manu; Boyden, Edward S; Jacobson, Joseph MNature materials2011 Aug596-60121743451
A chemical probe selectively inhibits G9a and GLP methyltransferase activity in cells.Vedadi, Masoud; Barsyte-Lovejoy, Dalia; Liu, Feng; Rival-Gervier, Sylvie; Allali-Hassani, Abdellah; Labrie, Viviane; Wigle, Tim J; Dimaggio, Peter A; Wasney, Gregory A; Siarheyeva, Alena; Dong, Aiping; Tempel, Wolfram; Wang, Sun-Chong; Chen, Xin; Chau, IrNature chemical biology2011 Aug566-7421743462
Shock and awe: unleashing the heat shock response to treat Huntington disease.Jackrel, Meredith E; Shorter, JamesThe Journal of clinical investigation2011 Aug2972-521785212
Scalable manufacturing of plasmonic nanodisk dimers and cusp nanostructures using salting-out quenching method and colloidal lithography.Juluri, Bala Krishna; Chaturvedi, Neetu; Hao, Qingzhen; Lu, Mengqian; Velegol, Darrell; Jensen, Lasse; Huang, Tony JunACS nano2011 Jul 265838-4721692473
Three-dimensional continuous particle focusing in a microfluidic channel via standing surface acoustic waves (SSAW).Shi, Jinjie; Yazdi, Shahrzad; Lin, Sz-Chin Steven; Ding, Xiaoyun; Chiang, I-Kao; Sharp, Kendra; Huang, Tony JunLab on a chip2011 Jul 212319-2421709881
Inflammation responsive logic gate nanoparticles for the delivery of proteins.Mahmoud, Enas A; Sankaranarayanan, Jagadis; Morachis, Jose M; Kim, Gloria; Almutairi, AdahBioconjugate chemistry2011 Jul 201416-2121688843
Wet nanoscale imaging and testing of polymersomes.Battaglia, Giuseppe; LoPresti, Caterina; Massignani, Marzia; Warren, Nicholas J; Madsen, Jeppe; Forster, Simon; Vasilev, Cvetilin; Hobbs, Jamie K; Armes, Steven P; Chirasatitsin, Somoyot; Engler, Adam JSmall (Weinheim an der Bergstrasse, Germany)2011 Jul 182010-521695783
Expanding cofactor repertoire of protein lysine methyltransferase for substrate labeling.Islam, Kabirul; Zheng, Weihong; Yu, Haiqiang; Deng, Haiteng; Luo, MinkuiACS chemical biology2011 Jul 15679-8421495674
Stereochemical basis for engineered pyrrolysyl-tRNA synthetase and the efficient in vivo incorporation of structurally divergent non-native amino acids.Takimoto, Jeffrey K; Dellas, Nikki; Noel, Joseph P; Wang, LeiACS chemical biology2011 Jul 15733-4321545173
Dissecting the oncogenic and tumorigenic potential of differentiated human induced pluripotent stem cells and human embryonic stem cells.Ghosh, Zhumur; Huang, Mei; Hu, Shijun; Wilson, Kitchener D; Dey, Devaveena; Wu, Joseph CCancer research2011 Jul 155030-921646469
Ank3-dependent SVZ niche assembly is required for the continued production of new neurons.Paez-Gonzalez, Patricia; Abdi, Khadar; Luciano, Dominic; Liu, Yan; Soriano-Navarro, Mario; Rawlins, Emma; Bennett, Vann; Garcia-Verdugo, Jose Manuel; Kuo, Chay TNeuron2011 Jul 1461-7521745638
Striatal origin of the pathologic beta oscillations in Parkinson's disease.McCarthy, M M; Moore-Kochlacs, C; Gu, X; Boyden, E S; Han, X; Kopell, NProceedings of the National Academy of Sciences of the United States of America2011 Jul 1211620-521697509
miR-30b/30d regulation of GalNAc transferases enhances invasion and immunosuppression during metastasis.Gaziel-Sovran, Avital; Segura, Miguel F; Di Micco, Raffaella; Collins, Mary K; Hanniford, Douglas; Vega-Saenz de Miera, Eleazar; Rakus, John F; Dankert, John F; Shang, Shulian; Kerbel, Robert S; Bhardwaj, Nina; Shao, Yongzhao; Darvishian, Farbod; Zavadil,Cancer cell2011 Jul 12104-1821741600
Lensfree On-Chip Microscopy and Tomography for Bio-Medical Applications.Isikman, Serhan O; Bishara, Waheb; Mudanyali, Onur; Sencan, Ikbal; Su, Ting-Wei; Tseng, Derek; Yaglidere, Oguzhan; Sikora, Uzair; Ozcan, AydoganIEEE journal of selected topics in quantum electronics : a publication of the IEEE Lasers and Electro-optics Society2011 Jul 111059-107224478572
The RING finger protein MSL2 in the MOF complex is an E3 ubiquitin ligase for H2B K34 and is involved in crosstalk with H3 K4 and K79 methylation.Wu, Lipeng; Zee, Barry M; Wang, Yanming; Garcia, Benjamin A; Dou, YaliMolecular cell2011 Jul 8132-4421726816
Models to understand the population-level impact of mixed strain M. tuberculosis infections.Sergeev, Rinat; Colijn, Caroline; Cohen, TedJournal of theoretical biology2011 Jul 788-10021514304
Field-portable lensfree tomographic microscope.Isikman, Serhan O; Bishara, Waheb; Sikora, Uzair; Yaglidere, Oguzhan; Yeah, John; Ozcan, AydoganLab on a chip2011 Jul 72222-3021573311
Detection and avoidance of a carnivore odor by prey.Ferrero, David M; Lemon, Jamie K; Fluegge, Daniela; Pashkovski, Stan L; Korzan, Wayne J; Datta, Sandeep Robert; Spehr, Marc; Fendt, Markus; Liberles, Stephen DProceedings of the National Academy of Sciences of the United States of America2011 Jul 511235-4021690383
A novel nanoparticle-enhanced photoacoustic stimulus for bone tissue engineering.Sitharaman, Balaji; Avti, Pramod K; Schaefer, Kenneth; Talukdar, Yahfi; Longtin, Jon PTissue engineering. Part A2011 Jul1851-821395444
Sex-specific cognitive deficits and regional brain volume loss in mice exposed to chronic, sublethal hypoxia.Lan, Wen-Chun J; Priestley, Matthew; Mayoral, Sonia R; Tian, Lu; Shamloo, Mehrdad; Penn, Anna APediatric research2011 Jul15-2021436761
Microbial colonization induces dynamic temporal and spatial patterns of NF-ýýB activation in the zebrafish digestive tract.Kanther, Michelle; Sun, Xiaolun; Muhlbauer, Marcus; Mackey, Lantz C; Flynn 3rd, Edward J; Bagnat, Michel; Jobin, Christian; Rawls, John FGastroenterology2011 Jul197-20721439961
Mechanisms for maintaining cell shape in rod-shaped Gram-negative bacteria.Furchtgott, Leon; Wingreen, Ned S; Huang, Kerwyn CaseyMolecular microbiology2011 Jul340-5321501250
Capturing the herpes simplex virus core fusion complex (gB-gH/gL) in an acidic environment.Cairns, Tina M; Whitbeck, J Charles; Lou, Huan; Heldwein, Ekaterina E; Chowdary, Tirumala K; Eisenberg, Roselyn J; Cohen, Gary HJournal of virology2011 Jul6175-8421507973
MyD88 and retinoic acid signaling pathways interact to modulate gastrointestinal activities of dendritic cells.Villablanca, Eduardo J; Wang, Sen; de Calisto, Jaime; Gomes, Daniel C O; Kane, Maureen A; Napoli, Joseph L; Blaner, William S; Kagechika, Hiroyuki; Blomhoff, Rune; Rosemblatt, Mario; Bono, Maria Rosa; von Andrian, Ulrich H; Mora, J RodrigoGastroenterology2011 Jul176-8521596042
MyD88-dependent TLR1/2 signals educate dendritic cells with gut-specific imprinting properties.Wang, Sen; Villablanca, Eduardo J; De Calisto, Jaime; Gomes, Daniel C O; Nguyen, Deanna D; Mizoguchi, Emiko; Kagan, Jonathan C; Reinecker, Hans-Christian; Hacohen, Nir; Nagler, Cathryn; Xavier, Ramnik J; Rossi-Bergmann, Bartira; Chen, Yi-Bin; Blomhoff, RuJournal of immunology (Baltimore, Md. : 1950)2011 Jul 1141-5021646294
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences.Medema, Marnix H; Blin, Kai; Cimermancic, Peter; de Jager, Victor; Zakrzewski, Piotr; Fischbach, Michael A; Weber, Tilmann; Takano, Eriko; Breitling, RainerNucleic acids research2011 JulW339-4621672958
The science and ethics of induced pluripotency: what will become of embryonic stem cells?Zacharias, David G; Nelson, Timothy J; Mueller, Paul S; Hook, C ChristopherMayo Clinic proceedings. Mayo Clinic2011 Jul634-4021719620
Targeting invadopodia to block breast cancer metastasis.Eckert, Mark A; Yang, JingOncotarget2011 Jul562-821725138
Does the potential for chaos constrain the embryonic cell-cycle oscillator?McIsaac, R Scott; Huang, Kerwyn Casey; Sengupta, Anirvan; Wingreen, Ned SPLoS computational biology2011 Jule100210921779158
RNA-binding proteins with prion-like domains in ALS and FTLD-U.Gitler, Aaron D; Shorter, JamesPrion2011 Jul-Sep179-8721847013
Recent progress in SERS biosensing.Bantz, Kyle C; Meyer, Audrey F; Wittenberg, Nathan J; Im, Hyungsoon; Kurtulus, Ozge; Lee, Si Hoon; Lindquist, Nathan C; Oh, Sang-Hyun; Haynes, Christy LPhysical chemistry chemical physics : PCCP2011 Jun 2811551-6721509385
Polarization-controlled differentiation of human neural stem cells using synergistic cues from the patterns of carbon nanotube monolayer coating.Park, Sung Young; Choi, Dong Shin; Jin, Hye Jun; Park, Juhun; Byun, Kyung-Eun; Lee, Ki-Bum; Hong, SeunghunACS nano2011 Jun 284704-1121568294
Nanospheres delivering the EGFR TKI AG1478 promote optic nerve regeneration: the role of size for intraocular drug delivery.Robinson, Rebecca; Viviano, Stephen R; Criscione, Jason M; Williams, Cicely A; Jun, Lin; Tsai, James C; Lavik, Erin BACS nano2011 Jun 284392-40021619059
Regulation of ubiquitin chain initiation to control the timing of substrate degradation.Williamson, Adam; Banerjee, Sudeep; Zhu, Xining; Philipp, Isabelle; Iavarone, Anthony T; Rape, MichaelMolecular cell2011 Jun 24744-5721700221
Sensitive on-chip detection of a protein biomarker in human serum and plasma over an extended dynamic range using silicon photonic microring resonators and sub-micron beads.Luchansky, Matthew S; Washburn, Adam L; McClellan, Melinda S; Bailey, Ryan CLab on a chip2011 Jun 212042-421541438
A yeast model for polyalanine-expansion aggregation and toxicity.Konopka, Catherine A; Locke, Melissa N; Gallagher, Pamela S; Pham, Ngan; Hart, Michael P; Walker, Claire J; Gitler, Aaron D; Gardner, Richard GMolecular biology of the cell2011 Jun 151971-8421508314
pH-Operated mechanized porous silicon nanoparticles.Xue, Min; Zhong, Xing; Shaposhnik, Zory; Qu, Yongquan; Tamanoi, Fuyuhiko; Duan, Xiangfeng; Zink, Jeffrey IJournal of the American Chemical Society2011 Jun 158798-80121595466
Modulation of material properties of a decellularized myocardial matrix scaffold.Singelyn, Jennifer M; Christman, Karen LMacromolecular bioscience2011 Jun 14731-821322109
Evaluating the prevalence of polyglutamine repeat expansions in amyotrophic lateral sclerosis.Lee, T; Li, Y R; Chesi, A; Hart, M P; Ramos, D; Jethava, N; Hosangadi, D; Epstein, J; Hodges, B; Bonini, N M; Gitler, A DNeurology2011 Jun 142062-521562248
Receptor tyrosine kinases and TLR/IL1Rs unexpectedly activate myeloid cell PI3kýý, a single convergent point promoting tumor inflammation and progression.Schmid, Michael C; Avraamides, Christie J; Dippold, Holly C; Franco, Irene; Foubert, Philippe; Ellies, Lesley G; Acevedo, Lissette M; Manglicmot, Joan R E; Song, Xiaodan; Wrasidlo, Wolfgang; Blair, Sara L; Ginsberg, Mark H; Cheresh, David A; Hirsch, EmiliCancer cell2011 Jun 14715-2721665146
Chromatin connections to pluripotency and cellular reprogramming.Orkin, Stuart H; Hochedlinger, KonradCell2011 Jun 10835-5021663790
Top-gated chemical vapor deposition grown graphene transistors with current saturation.Bai, Jingwei; Liao, Lei; Zhou, Hailong; Cheng, Rui; Liu, Lixin; Huang, Yu; Duan, XiangfengNano letters2011 Jun 82555-921548551
Small RNAs loom large during reprogramming.Sridharan, Rupa; Plath, KathrinCell stem cell2011 Jun 3599-60121624799
Maternal imprints and the origins of variation.Champagne, Frances AHormones and behavior2011 Jun4-1121376726
The ER stress factor XBP1s prevents amyloid-beta neurotoxicity.Casas-Tinto, Sergio; Zhang, Yan; Sanchez-Garcia, Jonatan; Gomez-Velazquez, Melisa; Rincon-Limas, Diego E; Fernandez-Funez, PedroHuman molecular genetics2011 Jun 12144-6021389082
Magnetic poly(lactide-co-glycolide) and cellulose particles for MRI-based cell tracking.Nkansah, Michael K; Thakral, Durga; Shapiro, Erik MMagnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine2011 Jun1776-8521404328
Thiazole/oxazole-modified microcins: complex natural products from ribosomal templates.Melby, Joel O; Nard, Nathan J; Mitchell, Douglas ACurrent opinion in chemical biology2011 Jun369-7821429787
Enhanced magnetic cell labeling efficiency using -NH2 coated MPIOs.Tang, Kevin S; Shapiro, Erik MMagnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine2011 Jun1564-921446031
Biosensor diagnosis of urinary tract infections: a path to better treatment?Mach, Kathleen E; Wong, Pak Kin; Liao, Joseph CTrends in pharmacological sciences2011 Jun330-621458868
Aldehyde dehydrogenase in combination with CD133 defines angiogenic ovarian cancer stem cells that portend poor patient survival.Silva, Ines A; Bai, Shoumei; McLean, Karen; Yang, Kun; Griffith, Kent; Thomas, Dafydd; Ginestier, Christophe; Johnston, Carolyn; Kueck, Angela; Reynolds, R Kevin; Wicha, Max S; Buckanovich, Ronald JCancer research2011 Jun 13991-400121498635
FGF signaling regulates the number of posterior taste papillae by controlling progenitor field size.Petersen, Camille I; Jheon, Andrew H; Mostowfi, Pasha; Charles, Cyril; Ching, Saunders; Thirumangalathu, Shoba; Barlow, Linda A; Klein, Ophir DPLoS genetics2011 June100209821655085
Towards an evolutionary model of transcription networks.Xie, Dan; Chen, Chieh-Chun; He, Xin; Cao, Xiaoyi; Zhong, ShengPLoS computational biology2011 June100206421695281
Labeling substrates of protein arginine methyltransferase with engineered enzymes and matched S-adenosyl-L-methionine analogues.Wang, Rui; Zheng, Weihong; Yu, Haiqiang; Deng, Haiteng; Luo, MinkuiJournal of the American Chemical Society2011 May 257648-5121539310
Biocompatible and pH-sensitive PLGA encapsulated MnO nanocrystals for molecular and cellular MRI.Bennewitz, Margaret F; Lobo, Tricia L; Nkansah, Michael K; Ulas, Gozde; Brudvig, Gary W; Shapiro, Erik MACS nano2011 May 243438-4621495676
Tracking brain states under general anesthesia by using global coherence analysis.Cimenser, Aylin; Purdon, Patrick L; Pierce, Eric T; Walsh, John L; Salazar-Gomez, Andres F; Harrell, Priscilla G; Tavares-Stoeckel, Casie; Habeeb, Kathleen; Brown, Emery NProceedings of the National Academy of Sciences of the United States of America2011 May 248832-721555565
The role of nanomaterials in translational medicine.Lavik, Erin; von Recum, HorstACS nano2011 May 243419-2421604811
A single-layer, planar, optofluidic Mach-Zehnder interferometer for label-free detection.Lapsley, Michael Ian; Chiang, I-Kao; Zheng, Yue Bing; Ding, Xiaoyun; Mao, Xiaole; Huang, Tony JunLab on a chip2011 May 211795-80021479332
Hybrid electrokinetic manipulation in high-conductivity media.Gao, Jian; Sin, Mandy L Y; Liu, Tingting; Gau, Vincent; Liao, Joseph C; Wong, Pak KinLab on a chip2011 May 211770-521487576
Phosphatidylethanolamines modified by ýý-ketoaldehyde (ýýKA) induce endoplasmic reticulum stress and endothelial activation.Guo, Lilu; Chen, Zhongyi; Cox, Brian E; Amarnath, Venkataraman; Epand, Raquel F; Epand, Richard M; Davies, Sean SThe Journal of biological chemistry2011 May 2018170-8021454544
Dual-mode of insulin action controls GLUT4 vesicle exocytosis.Xu, Yingke; Rubin, Bradley R; Orme, Charisse M; Karpikov, Alexander; Yu, Chenfei; Bogan, Jonathan S; Toomre, Derek KThe Journal of cell biology2011 May 16643-5321555461
Epithelial cell extrusion requires the sphingosine-1-phosphate receptor 2 pathway.Gu, Yapeng; Forostyan, Tetyana; Sabbadini, Roger; Rosenblatt, JodyThe Journal of cell biology2011 May 16667-7621555463
Application of fiber-optic attenuated total reflection-FT-IR methods for in situ characterization of protein delivery systems in real time.McFearin, Cathryn L; Sankaranarayanan, Jagadis; Almutairi, AdahAnalytical chemistry2011 May 153943-921476582
An epigenetic signature for monoallelic olfactory receptor expression.Magklara, Angeliki; Yen, Angela; Colquitt, Bradley M; Clowney, E Josephine; Allen, William; Markenscoff-Papadimitriou, Eirene; Evans, Zoe A; Kheradpour, Pouya; Mountoufaris, George; Carey, Catriona; Barnea, Gilad; Kellis, Manolis; Lomvardas, StavrosCell2011 May 13555-7021529909
Losartan restores skeletal muscle remodeling and protects against disuse atrophy in sarcopenia.Burks, Tyesha N; Andres-Mateos, Eva; Marx, Ruth; Mejias, Rebeca; Van Erp, Christel; Simmers, Jessica L; Walston, Jeremy D; Ward, Christopher W; Cohn, Ronald DScience translational medicine2011 May 1182ra3721562229
MHCII glycosylation modulates Bacteroides fragilis carbohydrate antigen presentation.Ryan, Sean O; Bonomo, Jason A; Zhao, Fan; Cobb, Brian AThe Journal of experimental medicine2011 May 91041-5321502329
Lens-free optical tomographic microscope with a large imaging volume on a chip.Isikman, Serhan O; Bishara, Waheb; Mavandadi, Sam; Yu, Frank W; Feng, Steve; Lau, Randy; Ozcan, AydoganProceedings of the National Academy of Sciences of the United States of America2011 May 37296-30121504943
Ataxin-2 intermediate-length polyglutamine expansions in European ALS patients.Lee, Teresa; Li, Yun R; Ingre, Caroline; Weber, Markus; Grehl, Torsten; Gredal, Ole; de Carvalho, Mamede; Meyer, Thomas; Tysnes, Ole-Bjorn; Auburger, Georg; Gispert, Suzana; Bonini, Nancy M; Andersen, Peter M; Gitler, Aaron DHuman molecular genetics2011 May 11697-70021292779
Release activation of iron oxide nanoparticles: (REACTION) a novel environmentally sensitive MRI paradigm.Granot, Dorit; Shapiro, Erik MMagnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine2011 May1253-921360745
A developmental taxonomy of glioblastoma defined and maintained by MicroRNAs.Kim, Tae-Min; Huang, Wei; Park, Richard; Park, Peter J; Johnson, Mark DCancer research2011 May 13387-9921385897
Apoptotic regulation of epithelial cellular extrusion.Andrade, Daniel; Rosenblatt, JodyApoptosis : an international journal on programmed cell death2011 May491-50121399977
DNA-encoding to improve performance and allow parallel evaluation of the binding characteristics of multiple antibodies in a surface-bound immunoassay format.Washburn, Adam L; Gomez, Joseph; Bailey, Ryan CAnalytical chemistry2011 May 13572-8021438633
Multianalyte on-chip native Western blotting.Tia, Samuel Q; He, Mei; Kim, Dohyun; Herr, Amy EAnalytical chemistry2011 May 13581-821456518
TRPA1 is required for histamine-independent, Mas-related G protein-coupled receptor-mediated itch.Wilson, Sarah R; Gerhold, Kristin A; Bifolck-Fisher, Amber; Liu, Qin; Patel, Kush N; Dong, Xinzhong; Bautista, Diana MNature neuroscience2011 May595-60221460831
Novel drug delivery systems for glaucoma.Lavik, E; Kuehn, M H; Kwon, Y HEye (London, England)2011 May578-8621475311
Use of whole genome sequencing to estimate the mutation rate of Mycobacterium tuberculosis during latent infection.Ford, Christopher B; Lin, Philana Ling; Chase, Michael R; Shah, Rupal R; Iartchouk, Oleg; Galagan, James; Mohaideen, Nilofar; Ioerger, Thomas R; Sacchettini, James C; Lipsitch, Marc; Flynn, JoAnne L; Fortune, Sarah MNature genetics2011 May482-621516081
Blocking lymphocyte localization to the gastrointestinal mucosa as a therapeutic strategy for inflammatory bowel diseases.Villablanca, Eduardo J; Cassani, Barbara; von Andrian, Ulrich H; Mora, J RodrigoGastroenterology2011 May1776-8421530744
Harnessing the potential of induced pluripotent stem cells for regenerative medicine.Wu, Sean M; Hochedlinger, KonradNature cell biology2011 May497-50521540845
Multiphoton fluorescence recovery after photobleaching in bounded systems.Sullivan, Kelley D; Brown, Edward BPhysical review. E, Statistical, nonlinear, and soft matter physics2011 May05191621728580
Photopatterned materials in bioanalytical microfluidic technology.Tentori, Augusto M; Herr, Amy EJournal of micromechanics and microengineering : structures, devices, and systems2011 May 15400121857772
Physicochemical regulation of biofilm formation.Renner, Lars D; Weibel, Douglas BMRS bulletin / Materials Research Society2011 May347-35522125358
Derivation of human induced pluripotent stem cells for cardiovascular disease modeling.Narsinh, Kamileh; Narsinh, Kazim H; Wu, Joseph CCirculation research2011 Apr 291146-5621527744
All-Optical Modulation of Localized Surface Plasmon Coupling in a Hybrid System Composed of Photo-Switchable Gratings and Au Nanodisk Arrays.Liu, Yan Jun; Zheng, Yue Bing; Liou, Justin; Chiang, I-Kao; Khoo, Iam Choon; Huang, Tony JunThe journal of physical chemistry. C, Nanomaterials and interfaces2011 Apr 217717-772221643480
Distinct representations of olfactory information in different cortical centres.Sosulski, Dara L; Bloom, Maria Lissitsyna; Cutforth, Tyler; Axel, Richard; Datta, Sandeep RobertNature2011 Apr 14213-621451525
Community health care: therapeutic opportunities in the human microbiome.Sonnenburg, Justin L; Fischbach, Michael AScience translational medicine2011 Apr 1378ps1221490274
Holographic pixel super-resolution in portable lensless on-chip microscopy using a fiber-optic array.Bishara, Waheb; Sikora, Uzair; Mudanyali, Onur; Su, Ting-Wei; Yaglidere, Oguzhan; Luckhart, Shirley; Ozcan, AydoganLab on a chip2011 Apr 71276-921365087
Social influences on neurobiology and behavior: epigenetic effects during development.Curley, J P; Jensen, C L; Mashoodh, R; Champagne, F APsychoneuroendocrinology2011 Apr352-7120650569
Mechanistic insights into reprogramming to induced pluripotency.Ho, Ritchie; Chronis, Constantinos; Plath, KathrinJournal of cellular physiology2011 Apr868-7820945378
Contractility dominates adhesive ligand density in regulating cellular de-adhesion and retraction kinetics.Sen, Shamik; Ng, Win Pin; Kumar, SanjayAnnals of biomedical engineering2011 Apr1163-7321046466
Signaling cell death from the endoplasmic reticulum stress response.Shore, Gordon C; Papa, Feroz R; Oakes, Scott ACurrent opinion in cell biology2011 Apr143-921146390
Biophysical regulation of tumor cell invasion: moving beyond matrix stiffness.Pathak, Amit; Kumar, SanjayIntegrative biology : quantitative biosciences from nano to macro2011 Apr267-7821210057
Mechanisms of excitatory synapse maturation by trans-synaptic organizing complexes.McMahon, Samuel A; Diaz, ElvaCurrent opinion in neurobiology2011 Apr221-721242087
Horizontal gene transfer between bacteria and animals.Dunning Hotopp, Julie CTrends in genetics : TIG2011 Apr157-6321334091
Homogeneous immunosubtraction integrated with sample preparation enabled by a microfluidic format.Apori, Akwasi A; Herr, Amy EAnalytical chemistry2011 Apr 12691-821375345
Electrochemical measurement of endogenous serotonin release from human blood platelets.Ge, Shencheng; Woo, Emily; White, James G; Haynes, Christy LAnalytical chemistry2011 Apr 12598-60421384903
Progress in understanding reprogramming to the induced pluripotent state.Plath, Kathrin; Lowry, William ENature reviews. Genetics2011 Apr253-6521415849
Using artificial systems to explore the ecology and evolution of symbioses.Momeni, Babak; Chen, Chi-Chun; Hillesland, Kristina L; Waite, Adam; Shou, WenyingCellular and molecular life sciences : CMLS2011 Apr1353-6821424911
Cognitive-behavioral therapy for children with comorbid physical illness.Thompson, Rachel D; Delaney, Patty; Flores, Inti; Szigethy, EvaChild and adolescent psychiatric clinics of North America2011 Apr329-4821440859
Comparison of human induced pluripotent and embryonic stem cells: fraternal or identical twins?Narsinh, Kazim H; Plews, Jordan; Wu, Joseph CMolecular therapy : the journal of the American Society of Gene Therapy2011 Apr635-821455209
Recycling microcavity optical biosensors.Hunt, Heather K; Armani, Andrea MOptics letters2011 Apr 11092-421478993
Molecular determinants and genetic modifiers of aggregation and toxicity for the ALS disease protein FUS/TLS.Sun, Zhihui; Diaz, Zamia; Fang, Xiaodong; Hart, Michael P; Chesi, Alessandra; Shorter, James; Gitler, Aaron DPLoS biology2011 Apre100061421541367
Mechanics of membrane bulging during cell-wall disruption in gram-negative bacteria.Daly, Kristopher E; Huang, Kerwyn Casey; Wingreen, Ned S; Mukhopadhyay, RanjanPhysical review. E, Statistical, nonlinear, and soft matter physics2011 Apr04192221599215
A peptidomics strategy to elucidate the proteolytic pathways that inactivate peptide hormones.Tinoco, Arthur D; Kim, Yun-Gon; Tagore, Debarati M; Wiwczar, Jessica; Lane, William S; Danial, Nika N; Saghatelian, AlanBiochemistry2011 Mar 292213-2221299233
Circadian rhythm gene period 3 is an inhibitor of the adipocyte cell fate.Costa, Maria Jose; So, Alex Y-L; Kaasik, Krista; Krueger, Katherine C; Pillsbury, Marlisa L; Fu, Ying-Hui; Ptacek, Louis J; Yamamoto, Keith R; Feldman, Brian JThe Journal of biological chemistry2011 Mar 189063-7021228270
Glycoantigens induce human peripheral Tr1 cell differentiation with gut-homing specialization.Kreisman, Lori S C; Cobb, Brian AThe Journal of biological chemistry2011 Mar 188810-821228275
Principles and strategies for developing network models in cancer.Pe'er, Dana; Hacohen, NirCell2011 Mar 18864-7321414479
Cellular decision making and biological noise: from microbes to mammals.Balazsi, Gabor; van Oudenaarden, Alexander; Collins, James JCell2011 Mar 18910-2521414483
Robust amyloid clearance in a mouse model of Alzheimer's disease provides novel insights into the mechanism of amyloid-beta immunotherapy.Wang, Allan; Das, Pritam; Switzer 3rd, Robert C; Golde, Todd E; Jankowsky, Joanna LThe Journal of neuroscience : the official journal of the Society for Neuroscience2011 Mar 164124-3621411653
Loss of sarcolemmal nNOS is common in acquired and inherited neuromuscular disorders.Finanger Hedderick, E L; Simmers, J L; Soleimani, A; Andres-Mateos, E; Marx, R; Files, D C; King, L; Crawford, T O; Corse, A M; Cohn, R DNeurology2011 Mar 15960-721403107
Twist1-induced invadopodia formation promotes tumor metastasis.Eckert, Mark A; Lwin, Thinzar M; Chang, Andrew T; Kim, Jihoon; Danis, Etienne; Ohno-Machado, Lucila; Yang, JingCancer cell2011 Mar 8372-8621397860
Three-dimensional chemical patterns for cellular self-organization.Kalinin, Yevgeniy V; Randhawa, Jatinder S; Gracias, David HAngewandte Chemie (International ed. in English)2011 Mar 72549-5321370335
Enabling cargo-carrying bacteria via surface attachment and triggered release.Fernandes, Rohan; Zuniga, Mary; Sassine, Fritz R; Karakoy, Mert; Gracias, David HSmall (Weinheim an der Bergstrasse, Germany)2011 Mar 7588-9221370460
Short-term immunosuppression promotes engraftment of embryonic and induced pluripotent stem cells.Pearl, Jeremy I; Lee, Andrew S; Leveson-Gower, Dennis B; Sun, Ning; Ghosh, Zhumur; Lan, Feng; Ransohoff, Julia; Negrin, Robert S; Davis, Mark M; Wu, Joseph CCell stem cell2011 Mar 4309-1721362570
The mechanism of linkage-specific ubiquitin chain elongation by a single-subunit E2.Wickliffe, Katherine E; Lorenz, Sonja; Wemmer, David E; Kuriyan, John; Rape, MichaelCell2011 Mar 4769-8121376237
Epigenetics and the origins of paternal effects.Curley, James P; Mashoodh, Rahia; Champagne, Frances AHormones and behavior2011 Mar306-1420620140
Protein-engineered biomaterials: nanoscale mimics of the extracellular matrix.Romano, Nicole H; Sengupta, Debanti; Chung, Cindy; Heilshorn, Sarah CBiochimica et biophysica acta2011 Mar339-4920647034
Injectable hydrogel scaffold from decellularized human lipoaspirate.Young, D Adam; Ibrahim, Dina O; Hu, Diane; Christman, Karen LActa biomaterialia2011 Mar1040-920932943
TDP-43 toxicity in yeast.Armakola, Maria; Hart, Michael P; Gitler, Aaron DMethods (San Diego, Calif.)2011 Mar238-4521115123
F2-isoprostanes as an indicator and risk factor for coronary heart disease.Davies, Sean S; Roberts 2nd, L JacksonFree radical biology & medicine2011 Mar 1559-6621126576
Probing cell migration in confined environments by plasma lithography.Junkin, Michael; Wong, Pak KinBiomaterials2011 Mar1848-5521134692
Mapping brain networks in awake mice using combined optical neural control and fMRI.Desai, M; Kahn, I; Knoblich, U; Bernstein, J; Atallah, H; Yang, A; Kopell, N; Buckner, R L; Graybiel, A M; Moore, C I; Boyden, E SJournal of neurophysiology2011 Mar1393-40521160013
Composition tuning the upconversion emission in NaYF4:Yb/Tm hexaplate nanocrystals.Zhang, Hua; Li, Yujing; Lin, Yungchen; Huang, Yu; Duan, XiangfengNanoscale2011 Mar963-621264435
Single cell transcriptional profiling reveals heterogeneity of human induced pluripotent stem cells.Narsinh, Kazim H; Sun, Ning; Sanchez-Freire, Veronica; Lee, Andrew S; Almeida, Patricia; Hu, Shijun; Jan, Taha; Wilson, Kitchener D; Leong, Denise; Rosenberg, Jarrett; Yao, Mylene; Robbins, Robert C; Wu, Joseph CThe Journal of clinical investigation2011 Mar1217-2121317531
Reprogramming to pluripotency: stepwise resetting of the epigenetic landscape.Papp, Bernadett; Plath, KathrinCell research2011 Mar486-50121321600
Recovery of intact DNA nanostructures after agarose gel-based separation.Bellot, Gaetan; McClintock, Mark A; Lin, Chenxiang; Shih, William MNature methods2011 Mar192-421358621
Mechanical load induces a 100-fold increase in the rate of collagen proteolysis by MMP-1.Adhikari, Arjun S; Chai, Jack; Dunn, Alexander RJournal of the American Chemical Society2011 Feb 161686-921247159
The genomic complexity of primary human prostate cancer.Berger, Michael F; Lawrence, Michael S; Demichelis, Francesca; Drier, Yotam; Cibulskis, Kristian; Sivachenko, Andrey Y; Sboner, Andrea; Esgueva, Raquel; Pflueger, Dorothee; Sougnez, Carrie; Onofrio, Robert; Carter, Scott L; Park, Kyung; Habegger, Lukas; ANature2011 Feb 10214-2021307934
Internally generated preactivation of single neurons in human medial frontal cortex predicts volition.Fried, Itzhak; Mukamel, Roy; Kreiman, GabrielNeuron2011 Feb 10548-6221315264
Neuroscience: what we cannot model, we do not understand.Anderson, William S; Kreiman, GabrielCurrent biology : CB2011 Feb 8R123-521300278
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Enhanced sensitivity for selected reaction monitoring mass spectrometry-based targeted proteomics using a dual stage electrodynamic ion funnel interface.Hossain, Mahmud; Kaleta, David T; Robinson, Errol W; Liu, Tao; Zhao, Rui; Page, Jason S; Kelly, Ryan T; Moore, Ronald J; Tang, Keqi; Camp 2nd, David G; Qian, Wei-Jun; Smith, Richard DMolecular & cellular proteomics : MCP2011 FebM000062-MCP20120410378
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Epigenomics: maternal high-fat diet exposure in utero disrupts peripheral circadian gene expression in nonhuman primates.Suter, Melissa; Bocock, Philip; Showalter, Lori; Hu, Min; Shope, Cynthia; McKnight, Robert; Grove, Kevin; Lane, Robert; Aagaard-Tillery, KjerstiFASEB journal : official publication of the Federation of American Societies for Experimental Biology2011 Feb714-2621097519
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An oracle: antituberculosis pharmacokinetics-pharmacodynamics, clinical correlation, and clinical trial simulations to predict the future.Pasipanodya, Jotam; Gumbo, TawandaAntimicrobial agents and chemotherapy2011 Jan24-3420937778
Activities of TMC207, rifampin, and pyrazinamide against Mycobacterium tuberculosis infection in guinea pigs.Shang, Shaobin; Shanley, Crystal A; Caraway, Megan L; Orme, Eileen A; Henao-Tamayo, Marcela; Hascall-Dove, Laurel; Ackart, David; Lenaerts, Anne J; Basaraba, Randall J; Orme, Ian M; Ordway, Diane JAntimicrobial agents and chemotherapy2011 Jan124-3120937788
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Increased infarct wall thickness by a bio-inert material is insufficient to prevent negative left ventricular remodeling after myocardial infarction.Rane, Aboli A; Chuang, Joyce S; Shah, Amul; Hu, Diane P; Dalton, Nancy D; Gu, Yusu; Peterson, Kirk L; Omens, Jeffrey H; Christman, Karen LPloS one2011e2157121731777
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Plasmodium falciparum glutamate dehydrogenase a is dispensable and not a drug target during erythrocytic development.Storm, Janet; Perner, Jan; Aparicio, Isabela; Patzewitz, Eva-Maria; Olszewski, Kellen; Llinas, Manuel; Engel, Paul C; Muller, SylkeMalaria journal201119321756354
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Killing hypoxic cell populations in a 3D tumor model with EtNBS-PDT.Evans, Conor L; Abu-Yousif, Adnan O; Park, Yong Jin; Klein, Oliver J; Celli, Jonathan P; Rizvi, Imran; Zheng, Xiang; Hasan, TayyabaPloS one2011e2343421876751
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Biochemical, structural and molecular dynamics analyses of the potential virulence factor RipA from Yersinia pestis.Torres, Rodrigo; Swift, Robert V; Chim, Nicholas; Wheatley, Nicole; Lan, Benson; Atwood, Brian R; Pujol, Celine; Sankaran, Banu; Bliska, James B; Amaro, Rommie E; Goulding, Celia WPloS one2011e2508421966419
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Distinct roles of microRNA-1 and -499 in ventricular specification and functional maturation of human embryonic stem cell-derived cardiomyocytes.Fu, Ji-Dong; Rushing, Stephanie N; Lieu, Deborah K; Chan, Camie W; Kong, Chi-Wing; Geng, Lin; Wilson, Kitchener D; Chiamvimonvat, Nipavan; Boheler, Kenneth R; Wu, Joseph C; Keller, Gordon; Hajjar, Roger J; Li, Ronald APloS one2011e2741722110643
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Lensless fluorescent on-chip microscopy using a fiber-optic taper.Coskun, Ahmet F; Sencan, Ikbal; Su, Ting-Wei; Ozcan, AydoganConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20115981-422255702
Wide-field fluorescent microscopy on a cell-phone.Zhu, Hongying; Yaglidere, Oguzhan; Su, Ting-Wei; Tseng, Derek; Ozcan, AydoganConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20116801-422255900
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Convergent functional genomics of anxiety disorders: translational identification of genes, biomarkers, pathways and mechanisms.Le-Niculescu, H; Balaraman, Y; Patel, S D; Ayalew, M; Gupta, J; Kuczenski, R; Shekhar, A; Schork, N; Geyer, M A; Niculescu, A BTranslational psychiatry2011e922832404
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Thalamocortical model for a propofol-induced alpha-rhythm associated with loss of consciousness.Ching, Shinung; Cimenser, Aylin; Purdon, Patrick L; Brown, Emery N; Kopell, Nancy JProceedings of the National Academy of Sciences of the United States of America2010 Dec 2822665-7021149695
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A biosynthetic strategy for re-engineering the Staphylococcus aureus cell wall with non-native small molecules.Nelson, James W; Chamessian, Alexander G; McEnaney, Patrick J; Murelli, Ryan P; Kazmierczak, Barbara I; Kazmiercak, Barbara I; Spiegel, David AACS chemical biology2010 Dec 171147-5520923200
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Characterization of the evanescent field profile and bound mass sensitivity of a label-free silicon photonic microring resonator biosensing platform.Luchansky, Matthew S; Washburn, Adam L; Martin, Teresa A; Iqbal, Muzammil; Gunn, L Cary; Bailey, Ryan CBiosensors & bioelectronics2010 Dec 151283-9120708399
Multiwaveguide implantable probe for light delivery to sets of distributed brain targets.Zorzos, Anthony N; Boyden, Edward S; Fonstad, Clifton GOptics letters2010 Dec 154133-521165114
An integrated approach to uncover drivers of cancer.Akavia, Uri David; Litvin, Oren; Kim, Jessica; Sanchez-Garcia, Felix; Kotliar, Dylan; Causton, Helen C; Pochanard, Panisa; Mozes, Eyal; Garraway, Levi A; Pe'er, DanaCell2010 Dec 101005-1721129771
Mycobacterium tuberculosis synergizes with ATP to induce release of microvesicles and exosomes containing major histocompatibility complex class II molecules capable of antigen presentation.Ramachandra, Lakshmi; Qu, Yan; Wang, Ying; Lewis, Colleen J; Cobb, Brian A; Takatsu, Kiyoshi; Boom, W Henry; Dubyak, George R; Harding, Clifford VInfection and immunity2010 Dec5116-2520837713
Structural basis of local, pH-dependent conformational changes in glycoprotein B from herpes simplex virus type 1.Stampfer, Samuel D; Lou, Huan; Cohen, Gary H; Eisenberg, Roselyn J; Heldwein, Ekaterina EJournal of virology2010 Dec12924-3320943984
Mapping of long-range associations throughout the fission yeast genome reveals global genome organization linked to transcriptional regulation.Tanizawa, Hideki; Iwasaki, Osamu; Tanaka, Atsunari; Capizzi, Joseph R; Wickramasinghe, Priyankara; Lee, Mihee; Fu, Zhiyan; Noma, Ken-ichiNucleic acids research2010 Dec8164-7721030438
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Structural determinants of PERK inhibitor potency and selectivity.Wang, Hong; Blais, Jaime; Ron, David; Cardozo, TimothyChemical biology & drug design2010 Dec480-9521070610
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Microfluidic immobilization of physiologically active Caenorhabditis elegans.Gilleland, Cody L; Rohde, Christopher B; Zeng, Fei; Yanik, Mehmet FatihNature protocols2010 Dec1888-90221127483
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Modeling Rett syndrome with stem cells.Walsh, Ryan M; Hochedlinger, KonradCell2010 Nov 12499-50021074040
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Three dimensional nanofabrication using surface forces.Cho, Jeong-Hyun; Azam, Anum; Gracias, David HLangmuir : the ACS journal of surfaces and colloids2010 Nov 216534-920507147
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Sizing up the future of microRNA analysis.Qavi, Abraham J; Kindt, Jared T; Bailey, Ryan CAnalytical and bioanalytical chemistry2010 Nov2535-4920680616
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F3-targeted cisplatin-hydrogel nanoparticles as an effective therapeutic that targets both murine and human ovarian tumor endothelial cells in vivo.Winer, Ira; Wang, Shouyan; Lee, Yong-Eun Koo; Lee, Youg-Eun Koo; Fan, Wenzhe; Gong, Yusong; Burgos-Ojeda, Daniela; Spahlinger, Greg; Kopelman, R; Buckanovich, Ronald JCancer research2010 Nov 18674-8320959470
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Large-scale in vivo femtosecond laser neurosurgery screen reveals small-molecule enhancer of regeneration.Samara, Chrysanthi; Rohde, Christopher B; Gilleland, Cody L; Norton, Stephanie; Haggarty, Stephen J; Yanik, Mehmet FatihProceedings of the National Academy of Sciences of the United States of America2010 Oct 2618342-720937901
A liquid chromatography-tandem mass spectrometry method for measurement of N-modified phosphatidylethanolamines.Guo, Lilu; Amarnath, Venkataraman; Davies, Sean SAnalytical biochemistry2010 Oct 15236-4520599652
TGF-ýý and insulin signaling regulate reproductive aging via oocyte and germline quality maintenance.Luo, Shijing; Kleemann, Gunnar A; Ashraf, Jasmine M; Shaw, Wendy M; Murphy, Coleen TCell2010 Oct 15299-31220946987
Sub-100 nm channel length graphene transistors.Liao, Lei; Bai, Jingwei; Cheng, Rui; Lin, Yung-Chen; Jiang, Shan; Qu, Yongquan; Huang, Yu; Duan, XiangfengNano letters2010 Oct 133952-620815334
Efficient bioconjugation of protein capture agents to biosensor surfaces using aniline-catalyzed hydrazone ligation.Byeon, Ji-Yeon; Limpoco, F T; Bailey, Ryan CLangmuir : the ACS journal of surfaces and colloids2010 Oct 515430-520809595
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Parallel gateways to pluripotency: open chromatin in stem cells and development.Koh, Fong Ming; Sachs, Michael; Guzman-Ayala, Marcela; Ramalho-Santos, MiguelCurrent opinion in genetics & development2010 Oct492-920598875
Injectable materials for the treatment of myocardial infarction and heart failure: the promise of decellularized matrices.Singelyn, Jennifer M; Christman, Karen LJournal of cardiovascular translational research2010 Oct478-8620632221
Dynamic microRNA expression programs during cardiac differentiation of human embryonic stem cells: role for miR-499.Wilson, Kitchener D; Hu, Shijun; Venkatasubrahmanyam, Shivkumar; Fu, Ji-Dong; Sun, Ning; Abilez, Oscar J; Baugh, Joshua J A; Jia, Fangjun; Ghosh, Zhumur; Li, Ronald A; Butte, Atul J; Wu, Joseph CCirculation. Cardiovascular genetics2010 Oct426-3520733065
Regulation of muscle mass by follistatin and activins.Lee, Se-Jin; Lee, Yun-Sil; Zimmers, Teresa A; Soleimani, Arshia; Matzuk, Martin M; Tsuchida, Kunihiro; Cohn, Ronald D; Barton, Elisabeth RMolecular endocrinology (Baltimore, Md.)2010 Oct1998-200820810712
Compact and light-weight automated semen analysis platform using lensfree on-chip microscopy.Su, Ting-Wei; Erlinger, Anthony; Tseng, Derek; Ozcan, AydoganAnalytical chemistry2010 Oct 18307-1220836503
Countering amyloid polymorphism and drug resistance with minimal drug cocktails.Duennwald, Martin L; Shorter, JamesPrion2010 Oct-Dec244-5120935457
Pairwise network mechanisms in the host signaling response to coxsackievirus B3 infection.Garmaroudi, Farshid S; Marchant, David; Si, Xiaoning; Khalili, Abbas; Bashashati, Ali; Wong, Brian W; Tabet, Aline; Ng, Raymond T; Murphy, Kevin; Luo, Honglin; Janes, Kevin A; McManus, Bruce MProceedings of the National Academy of Sciences of the United States of America2010 Sep 2817053-820833815
Heterointegration of Pt/Si/Ag Nanowire Photodiodes and Their Photocatalytic Properties.Qu, Yongquan; Xue, Teng; Zhong, Xing; Lin, Yung-Chen; Liao, Lei; Choi, Jina; Duan, XiangfengAdvanced functional materials2010 Sep 233005-301121629399
Detection of waterborne parasites using field-portable and cost-effective lensfree microscopy.Mudanyali, Onur; Oztoprak, Cetin; Tseng, Derek; Erlinger, Anthony; Ozcan, AydoganLab on a chip2010 Sep 212419-2320694255
Critical role of membrane cholesterol in exocytosis revealed by single platelet study.Ge, Shencheng; White, James G; Haynes, Christy LACS chemical biology2010 Sep 17819-2820590163
High-speed graphene transistors with a self-aligned nanowire gate.Liao, Lei; Lin, Yung-Chen; Bao, Mingqiang; Cheng, Rui; Bai, Jingwei; Liu, Yuan; Qu, Yongquan; Wang, Kang L; Huang, Yu; Duan, XiangfengNature2010 Sep 16305-820811365
A model of redox kinetics implicates the thiol proteome in cellular hydrogen peroxide responses.Adimora, Nnenna J; Jones, Dean P; Kemp, Melissa LAntioxidants & redox signaling2010 Sep 15731-4320121341
A remote arene-binding site on prostate specific membrane antigen revealed by antibody-recruiting small molecules.Zhang, Andrew X; Murelli, Ryan P; Barinka, Cyril; Michel, Julien; Cocleaza, Alexandra; Jorgensen, William L; Lubkowski, Jacek; Spiegel, David AJournal of the American Chemical Society2010 Sep 1512711-620726553
Integration of early physiological responses predicts later illness severity in preterm infants.Saria, Suchi; Rajani, Anand K; Gould, Jeffrey; Koller, Daphne; Penn, Anna AScience translational medicine2010 Sep 848ra6520826840
Reconstruction and flux-balance analysis of the Plasmodium falciparum metabolic network.Plata, German; Hsiao, Tzu-Lin; Olszewski, Kellen L; Llinas, Manuel; Vitkup, DennisMolecular systems biology2010 Sep 740820823846
Female human iPSCs retain an inactive X chromosome.Tchieu, Jason; Kuoy, Edward; Chin, Mark H; Trinh, Hung; Patterson, Michaela; Sherman, Sean P; Aimiuwu, Otaren; Lindgren, Anne; Hakimian, Shahrad; Zack, Jerome A; Clark, Amander T; Pyle, April D; Lowry, William E; Plath, KathrinCell stem cell2010 Sep 3329-4220727844
Dynamic polar sequestration of excess MurG may regulate enzymatic function.Michaelis, Allison M; Gitai, ZemerJournal of bacteriology2010 Sep4597-60520644141
Very large magnetoresistance in graphene nanoribbons.Bai, Jingwei; Cheng, Rui; Xiu, Faxian; Liao, Lei; Wang, Minsheng; Shailos, Alexandros; Wang, Kang L; Huang, Yu; Duan, XiangfengNature nanotechnology2010 Sep655-920693988
How cortical neurons help us see: visual recognition in the human brain.Blumberg, Julie; Kreiman, GabrielThe Journal of clinical investigation2010 Sep3054-6320811161
Isolation and functional characterization of pluripotent stem cell-derived cardiac progenitor cells.Huang, Xiaojing; Wu, Sean MCurrent protocols in stem cell biology2010 SepUnit 1F.1020814937
Ataxin-2 intermediate-length polyglutamine expansions are associated with increased risk for ALS.Elden, Andrew C; Kim, Hyung-Jun; Hart, Michael P; Chen-Plotkin, Alice S; Johnson, Brian S; Fang, Xiaodong; Armakola, Maria; Geser, Felix; Greene, Robert; Lu, Min Min; Padmanabhan, Arun; Clay-Falcone, Dana; McCluskey, Leo; Elman, Lauren; Juhr, Denise; GrubNature2010 Aug 261069-7520740007
Deciphering subcellular processes in live imaging datasets via dynamic probabilistic networks.Letinic, Kresimir; Sebastian, Rafael; Barthel, Andrew; Toomre, DerekBioinformatics (Oxford, England)2010 Aug 152029-3620581401
Caulobacter chromosome segregation is an ordered multistep process.Shebelut, Conrad W; Guberman, Jonathan M; van Teeffelen, Sven; Yakhnina, Anastasiya A; Gitai, ZemerProceedings of the National Academy of Sciences of the United States of America2010 Aug 1014194-820660743
A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response.Huarte, Maite; Guttman, Mitchell; Feldser, David; Garber, Manuel; Koziol, Magdalena J; Kenzelmann-Broz, Daniela; Khalil, Ahmad M; Zuk, Or; Amit, Ido; Rabani, Michal; Attardi, Laura D; Regev, Aviv; Lander, Eric S; Jacks, Tyler; Rinn, John LCell2010 Aug 6409-1920673990
Molecular analyses of human induced pluripotent stem cells and embryonic stem cells.Chin, Mark H; Pellegrini, Matteo; Plath, Kathrin; Lowry, William ECell stem cell2010 Aug 6263-920682452
Branched tricarboxylic acid metabolism in Plasmodium falciparum.Olszewski, Kellen L; Mather, Michael W; Morrisey, Joanne M; Garcia, Benjamin A; Vaidya, Akhil B; Rabinowitz, Joshua D; Llinas, ManuelNature2010 Aug 5774-820686576
Nanoscale morphology, dimensional control, and electrical properties of oligoanilines.Wang, Yue; Tran, Henry D; Liao, Lei; Duan, Xiangfeng; Kaner, Richard BJournal of the American Chemical Society2010 Aug 410365-7320662516
Development of extensively drug-resistant tuberculosis during multidrug-resistant tuberculosis treatment.Shin, Sonya S; Keshavjee, Salmaan; Gelmanova, Irina Y; Atwood, Sidney; Franke, Molly F; Mishustin, Sergey P; Strelis, Aivar K; Andreev, Yevgeny G; Pasechnikov, Alexander D; Barnashov, Alexander; Tonkel, Tamara P; Cohen, TedAmerican journal of respiratory and critical care medicine2010 Aug 1426-3220413630
Accurate detection of low levels of fluorescence emission in autofluorescent background: francisella-infected macrophage cells.Davis, Ryan W; Timlin, Jerilyn A; Kaiser, Julia N; Sinclair, Michael B; Jones, Howland D T; Lane, Todd WMicroscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada2010 Aug478-8720569528
A microfluidic platform for systems pathology: multiparameter single-cell signaling measurements of clinical brain tumor specimens.Sun, Jing; Masterman-Smith, Michael D; Graham, Nicholas A; Jiao, Jing; Mottahedeh, Jack; Laks, Dan R; Ohashi, Minori; DeJesus, Jason; Kamei, Ken-ichiro; Lee, Ki-Bum; Wang, Hao; Yu, Zeta T F; Lu, Yi-Tsung; Hou, Shuang; Li, Keyu; Liu, Max; Zhang, Nangang; WCancer research2010 Aug 16128-3820631065
High-throughput in vivo vertebrate screening.Pardo-Martin, Carlos; Chang, Tsung-Yao; Koo, Bryan Kyo; Gilleland, Cody L; Wasserman, Steven C; Yanik, Mehmet FatihNature methods2010 Aug634-620639868
The metabolic enzyme CTP synthase forms cytoskeletal filaments.Ingerson-Mahar, Michael; Briegel, Ariane; Werner, John N; Jensen, Grant J; Gitai, ZemerNature cell biology2010 Aug739-4620639870
Cell type of origin influences the molecular and functional properties of mouse induced pluripotent stem cells.Polo, Jose M; Liu, Susanna; Figueroa, Maria Eugenia; Kulalert, Warakorn; Eminli, Sarah; Tan, Kah Yong; Apostolou, Effie; Stadtfeld, Matthias; Li, Yushan; Shioda, Toshi; Natesan, Sridaran; Wagers, Amy J; Melnick, Ari; Evans, Todd; Hochedlinger, KonradNature biotechnology2010 Aug848-5520644536
Lensfree microscopy on a cellphone.Tseng, Derek; Mudanyali, Onur; Oztoprak, Cetin; Isikman, Serhan O; Sencan, Ikbal; Yaglidere, Oguzhan; Ozcan, AydoganLab on a chip2010 Jul 211787-9220445943
UV and near-IR triggered release from polymeric nanoparticles.Fomina, Nadezda; McFearin, Cathryn; Sermsakdi, Marleen; Edigin, Osayimwense; Almutairi, AdahJournal of the American Chemical Society2010 Jul 219540-220568765
Convex lens-induced confinement for imaging single molecules.Leslie, Sabrina R; Fields, Alexander P; Cohen, Adam EAnalytical chemistry2010 Jul 156224-920557026
Crystal structure of arginase from Plasmodium falciparum and implications for L-arginine depletion in malarial infection .Dowling, Daniel P; Ilies, Monica; Olszewski, Kellen L; Portugal, Silvia; Mota, Maria M; Llinas, Manuel; Christianson, David WBiochemistry2010 Jul 65600-820527960
Emergence and natural selection of drug-resistant prions.Shorter, JamesMolecular bioSystems2010 Jul1115-3020422111
Clinical and toxicodynamic evidence that high-dose pyrazinamide is not more hepatotoxic than the low doses currently used.Pasipanodya, Jotam G; Gumbo, TawandaAntimicrobial agents and chemotherapy2010 Jul2847-5420439617
Regulation of oxysterol-binding protein Golgi localization through protein kinase D-mediated phosphorylation.Nhek, Sokha; Ngo, Mike; Yang, Xuemei; Ng, Michelle M; Field, Seth J; Asara, John M; Ridgway, Neale D; Toker, AlexMolecular biology of the cell2010 Jul 12327-3720444975
Self-assembly of three-dimensional prestressed tensegrity structures from DNA.Liedl, Tim; Hogberg, Bjorn; Tytell, Jessica; Ingber, Donald E; Shih, William MNature nanotechnology2010 Jul520-420562873
Structure-function relationships of HIV-1 envelope sequence-variable regions refocus vaccine design.Zolla-Pazner, Susan; Cardozo, TimothyNature reviews. Immunology2010 Jul527-3520577269
Crystal structure of the conserved herpesvirus fusion regulator complex gH-gL.Chowdary, Tirumala K; Cairns, Tina M; Atanasiu, Doina; Cohen, Gary H; Eisenberg, Roselyn J; Heldwein, Ekaterina ENature structural & molecular biology2010 Jul882-820601960
Paring down signaling complexity.Janes, Kevin ANature biotechnology2010 Jul681-220622836
Specificity of polysaccharide use in intestinal bacteroides species determines diet-induced microbiota alterations.Sonnenburg, Erica D; Zheng, Hongjun; Joglekar, Payal; Higginbottom, Steven K; Firbank, Susan J; Bolam, David N; Sonnenburg, Justin LCell2010 Jun 251241-5220603004
In vivo imaging with a cell-permeable porphyrin-based MRI contrast agent.Lee, Taekwan; Zhang, Xiao-an; Dhar, Shanta; Faas, Henryk; Lippard, Stephen J; Jasanoff, AlanChemistry & biology2010 Jun 25665-7320609416
Multiplexed detection and label-free quantitation of microRNAs using arrays of silicon photonic microring resonators.Qavi, Abraham J; Bailey, Ryan CAngewandte Chemie (International ed. in English)2010 Jun 214608-1120491114
Compact, light-weight and cost-effective microscope based on lensless incoherent holography for telemedicine applications.Mudanyali, Onur; Tseng, Derek; Oh, Chulwoo; Isikman, Serhan O; Sencan, Ikbal; Bishara, Waheb; Oztoprak, Cetin; Seo, Sungkyu; Khademhosseini, Bahar; Ozcan, AydoganLab on a chip2010 Jun 71417-2820401422
What is the mechanism for persistent coexistence of drug-susceptible and drug-resistant strains of Streptococcus pneumoniae?Colijn, Caroline; Cohen, Ted; Fraser, Christophe; Hanage, William; Goldstein, Edward; Givon-Lavi, Noga; Dagan, Ron; Lipsitch, MarcJournal of the Royal Society, Interface / the Royal Society2010 Jun 6905-1919940002
Curving nanostructures using extrinsic stress.Cho, Jeong-Hyun; James, Teena; Gracias, David HAdvanced materials (Deerfield Beach, Fla.)2010 Jun 42320-420376856
Design and characterization of an injectable pericardial matrix gel: a potentially autologous scaffold for cardiac tissue engineering.Seif-Naraghi, Sonya B; Salvatore, Michael A; Schup-Magoffin, Pam J; Hu, Diane P; Christman, Karen LTissue engineering. Part A2010 Jun2017-2720100033
Surface association and the MreB cytoskeleton regulate pilus production, localization and function in Pseudomonas aeruginosa.Cowles, Kimberly N; Gitai, ZemerMolecular microbiology2010 Jun1411-2620398206
High-throughput lens-free blood analysis on a chip.Seo, Sungkyu; Isikman, Serhan O; Sencan, Ikbal; Mudanyali, Onur; Su, Ting-Wei; Bishara, Waheb; Erlinger, Anthony; Ozcan, AydoganAnalytical chemistry2010 Jun 14621-720450181
Knitting complex weaves with DNA origami.Shih, William M; Lin, ChenxiangCurrent opinion in structural biology2010 Jun276-8220456942
Gene correction in human embryonic and induced pluripotent stem cells: promises and challenges ahead.Narsinh, Kazim H; Wu, Joseph CMolecular therapy : the journal of the American Society of Gene Therapy2010 Jun1061-320514030
Dynamic SpoIIIE assembly mediates septal membrane fission during Bacillus subtilis sporulation.Fleming, Tinya C; Shin, Jae Yen; Lee, Sang-Hyuk; Becker, Eric; Huang, Kerwyn Casey; Bustamante, Carlos; Pogliano, KitGenes & development2010 Jun 11160-7220516200
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Development and interlaboratory validation of a QuEChERS-based liquid chromatography-tandem mass spectrometry method for multiresidue pesticide analysis.Wong, Jon; Hao, Chunyan; Zhang, Kai; Yang, Paul; Banerjee, Kaushik; Hayward, Douglas; Iftakhar, Imran; Schreiber, Andre; Tech, Katherine; Sack, Chris; Smoker, Michael; Chen, Xiangru; Utture, Sagar C; Oulkar, Dasharath PJournal of agricultural and food chemistry2010 May 265897-90320196606
A secreted enzyme reporter system for MRI.Westmeyer, Gil G; Durocher, Yves; Jasanoff, AlanAngewandte Chemie (International ed. in English)2010 May 253909-1120414908
Lensfree on-chip microscopy over a wide field-of-view using pixel super-resolution.Bishara, Waheb; Su, Ting-Wei; Coskun, Ahmet F; Ozcan, AydoganOptics express2010 May 2411181-9120588977
Detecting cell-adhesive sites in extracellular matrix using force spectroscopy mapping.Chirasatitsin, Somyot; Engler, Adam JJournal of physics. Condensed matter : an Institute of Physics journal2010 May 1919410221152375
Regulated degradation of spindle assembly factors by the anaphase-promoting complex.Song, Ling; Rape, MichaelMolecular cell2010 May 14369-8220471943
Widespread transcription at neuronal activity-regulated enhancers.Kim, Tae-Kyung; Hemberg, Martin; Gray, Jesse M; Costa, Allen M; Bear, Daniel M; Wu, Jing; Harmin, David A; Laptewicz, Mike; Barbara-Haley, Kellie; Kuersten, Scott; Markenscoff-Papadimitriou, Eirene; Kuhl, Dietmar; Bito, Haruhiko; Worley, Paul F; Kreiman, Nature2010 May 13182-720393465
Aberrant silencing of imprinted genes on chromosome 12qF1 in mouse induced pluripotent stem cells.Stadtfeld, Matthias; Apostolou, Effie; Akutsu, Hidenori; Fukuda, Atsushi; Follett, Patricia; Natesan, Sridaran; Kono, Tomohiro; Shioda, Toshi; Hochedlinger, KonradNature2010 May 13175-8120418860
Rational design and synthesis of freestanding photoelectric nanodevices as highly efficient photocatalysts.Qu, Yongquan; Liao, Lei; Cheng, Rui; Wang, Yue; Lin, Yung-Chen; Huang, Yu; Duan, XiangfengNano letters2010 May 121941-920373781
Top-gated graphene nanoribbon transistors with ultrathin high-k dielectrics.Liao, Lei; Bai, Jingwei; Cheng, Rui; Lin, Yung-Chen; Jiang, Shan; Huang, Yu; Duan, XiangfengNano letters2010 May 121917-2120380441
The Prp19 WD40 domain contains a conserved protein interaction region essential for its function.Vander Kooi, Craig W; Ren, Liping; Xu, Ping; Ohi, Melanie D; Gould, Kathleen L; Chazin, Walter JStructure (London, England : 1993)2010 May 12584-9320462492
Robust selectivity to two-object images in human visual cortex.Agam, Yigal; Liu, Hesheng; Papanastassiou, Alexander; Buia, Calin; Golby, Alexandra J; Madsen, Joseph R; Kreiman, GabrielCurrent biology : CB2010 May 11872-920417105
Lensless wide-field fluorescent imaging on a chip using compressive decoding of sparse objects.Coskun, Ahmet F; Sencan, Ikbal; Su, Ting-Wei; Ozcan, AydoganOptics express2010 May 1010510-2320588904
Measurement of the ratio of forward-propagating to back-propagating second harmonic signal using a single objective.Han, Xiaoxing; Brown, EdwardOptics express2010 May 1010538-5020588906
Color and monochrome lensless on-chip imaging of Caenorhabditis elegans over a wide field-of-view.Isikman, Serhan O; Sencan, Ikbal; Mudanyali, Onur; Bishara, Waheb; Oztoprak, Cetin; Ozcan, AydoganLab on a chip2010 May 71109-1220390127
Microfluidic image cytometry for quantitative single-cell profiling of human pluripotent stem cells in chemically defined conditions.Kamei, Ken-ichiro; Ohashi, Minori; Gschweng, Eric; Ho, Quinn; Suh, Jane; Tang, Jinghua; For Yu, Zeta Tak; Clark, Amander T; Pyle, April D; Teitell, Michael A; Lee, Ki-Bum; Witte, Owen N; Tseng, Hsian-RongLab on a chip2010 May 71113-920390128
Imprints of the genetic code in the ribosome.Johnson, David B F; Wang, LeiProceedings of the National Academy of Sciences of the United States of America2010 May 48298-30320385807
High-performance top-gated graphene-nanoribbon transistors using zirconium oxide nanowires as high-dielectric-constant gate dielectrics.Liao, Lei; Bai, Jingwei; Lin, Yung-Chen; Qu, Yongquan; Huang, Yu; Duan, XiangfengAdvanced materials (Deerfield Beach, Fla.)2010 May 41941-520526997
Recombinant derivatives of botulinum neurotoxin A engineered for trafficking studies and neuronal delivery.Band, Philip A; Blais, Steven; Neubert, Thomas A; Cardozo, Timothy J; Ichtchenko, KonstantinProtein expression and purification2010 May62-7320045734
Epigenetic influence of social experiences across the lifespan.Champagne, Frances ADevelopmental psychobiology2010 May299-31120175106
Syncytial phenotype of C-terminally truncated herpes simplex virus type 1 gB is associated with diminished membrane interactions.Chowdary, Tirumala Kumar; Heldwein, Ekaterina EJournal of virology2010 May4923-3520200237
Tuning and controlling gene expression noise in synthetic gene networks.Murphy, Kevin F; Adams, Rhys M; Wang, Xiao; Balazsi, Gabor; Collins, James JNucleic acids research2010 May2712-2620211838
Genome-wide mapping and assembly of structural variant breakpoints in the mouse genome.Quinlan, Aaron R; Clark, Royden A; Sokolova, Svetlana; Leibowitz, Mitchell L; Zhang, Yujun; Hurles, Matthew E; Mell, Joshua C; Hall, Ira MGenome research2010 May623-3520308636
Negative controls: a tool for detecting confounding and bias in observational studies.Lipsitch, Marc; Tchetgen Tchetgen, Eric; Cohen, TedEpidemiology (Cambridge, Mass.)2010 May383-820335814
Lensfree holographic imaging of antibody microarrays for high-throughput detection of leukocyte numbers and function.Stybayeva, Gulnaz; Mudanyali, Onur; Seo, Sungkyu; Silangcruz, Jaime; Macal, Monica; Ramanculov, Erlan; Dandekar, Satya; Erlinger, Anthony; Ozcan, Aydogan; Revzin, AlexanderAnalytical chemistry2010 May 13736-4420359168
Parent-of-origin and trans-generational germline influences on behavioral development: the interacting roles of mothers, fathers, and grandparents.Curley, J P; Mashoodh, RDevelopmental psychobiology2010 May312-3020373326
Clinical assessment incorporating a personal genome.Ashley, Euan A; Butte, Atul J; Wheeler, Matthew T; Chen, Rong; Klein, Teri E; Dewey, Frederick E; Dudley, Joel T; Ormond, Kelly E; Pavlovic, Aleksandra; Morgan, Alexander A; Pushkarev, Dmitry; Neff, Norma F; Hudgins, Louanne; Gong, Li; Hodges, Laura M; BeLancet2010 May 11525-3520435227
Macromolecules that prefer their membranes curvy.Huang, Kerwyn Casey; Ramamurthi, Kumaran SMolecular microbiology2010 May822-3220444099
Contribution of the myosin VI tail domain to processive stepping and intramolecular tension sensing.Dunn, Alexander R; Chuan, Peiying; Bryant, Zev; Spudich, James AProceedings of the National Academy of Sciences of the United States of America2010 Apr 277746-5020385849
Multi-angle lensless digital holography for depth resolved imaging on a chip.Su, Ting-Wei; Isikman, Serhan O; Bishara, Waheb; Tseng, Derek; Erlinger, Anthony; Ozcan, AydoganOptics express2010 Apr 269690-71120588819
Efflux-pump-derived multiple drug resistance to ethambutol monotherapy in Mycobacterium tuberculosis and the pharmacokinetics and pharmacodynamics of ethambutol.Srivastava, Shashikant; Musuka, Sandirai; Sherman, Carleton; Meek, Claudia; Leff, Richard; Gumbo, TawandaThe Journal of infectious diseases2010 Apr 151225-3120210628
Prion-like disorders: blurring the divide between transmissibility and infectivity.Cushman, Mimi; Johnson, Brian S; King, Oliver D; Gitler, Aaron D; Shorter, JamesJournal of cell science2010 Apr 151191-20120356930
Neuronal pentraxins mediate silent synapse conversion in the developing visual system.Koch, Selina M; Ullian, Erik MThe Journal of neuroscience : the official journal of the Society for Neuroscience2010 Apr 145404-1420392962
High-kappa oxide nanoribbons as gate dielectrics for high mobility top-gated graphene transistors.Liao, Lei; Bai, Jingwei; Qu, Yongquan; Lin, Yung-chen; Li, Yujing; Huang, Yu; Duan, XiangfengProceedings of the National Academy of Sciences of the United States of America2010 Apr 136711-520308584
A step closer to complete chemical reprogramming for generating iPS cells.Solanki, Aniruddh; Lee, Ki BumChembiochem : a European journal of chemical biology2010 Apr 12755-720183843
Three-dimensional fabrication at small size scales.Leong, Timothy G; Zarafshar, Aasiyeh M; Gracias, David HSmall (Weinheim an der Bergstrasse, Germany)2010 Apr 9792-80620349446
Wide field-of-view lens-free fluorescent imaging on a chip.Coskun, Ahmet F; Su, Ting-Wei; Ozcan, AydoganLab on a chip2010 Apr 7824-720379564
Plasmonic modulation of the upconversion fluorescence in NaYF4 :Yb/Tm hexaplate nanocrystals using gold nanoparticles or nanoshells.Zhang, Hua; Li, Yujing; Ivanov, Ivan A; Qu, Yongquan; Huang, Yu; Duan, XiangfengAngewandte Chemie (International ed. in English)2010 Apr 62865-820235253
Remote sites of structural atrophy predict later amyloid formation in a mouse model of Alzheimer's disease.Badea, Alexandra; Johnson, G Allan; Jankowsky, Joanna LNeuroImage2010 Apr 1416-2720035883
New susceptibility breakpoints for first-line antituberculosis drugs based on antimicrobial pharmacokinetic/pharmacodynamic science and population pharmacokinetic variability.Gumbo, TawandaAntimicrobial agents and chemotherapy2010 Apr1484-9120086150
Carbohydrate oxidation acidifies endosomes, regulating antigen processing and TLR9 signaling.Lewis, Colleen J; Cobb, Brian AJournal of immunology (Baltimore, Md. : 1950)2010 Apr 13789-80020200279
Identifying single-cell molecular programs by stochastic profiling.Janes, Kevin A; Wang, Chun-Chao; Holmberg, Karin J; Cabral, Kristin; Brugge, Joan SNature methods2010 Apr311-720228812
The UPR and cell fate at a glance.Merksamer, Philip I; Papa, Feroz RJournal of cell science2010 Apr 11003-620332117
RNA traffic control of chromatin complexes.Koziol, Magdalena J; Rinn, John LCurrent opinion in genetics & development2010 Apr142-820362426
Inflammatory bowel disease.Szigethy, Eva; McLafferty, Laura; Goyal, AlkaChild and adolescent psychiatric clinics of North America2010 Apr301-18, ix20478501
Expanding the dipeptidyl peptidase 4-regulated peptidome via an optimized peptidomics platform.Tinoco, Arthur D; Tagore, Debarati M; Saghatelian, AlanJournal of the American Chemical Society2010 Mar 243819-3020178363
De novo self-assembling collagen heterotrimers using explicit positive and negative design.Xu, Fei; Zhang, Lei; Koder, Ronald L; Nanda, VikasBiochemistry2010 Mar 232307-1620170197
BEDTools: a flexible suite of utilities for comparing genomic features.Quinlan, Aaron R; Hall, Ira MBioinformatics (Oxford, England)2010 Mar 15841-220110278
MRI sensing based on the displacement of paramagnetic ions from chelated complexes.Atanasijevic, Tatjana; Zhang, Xiao-an; Lippard, Stephen J; Jasanoff, AlanInorganic chemistry2010 Mar 152589-9120141114
The imprinted gene PEG3 inhibits Wnt signaling and regulates glioma growth.Jiang, Xiuli; Yu, Yi; Yang, Hong Wei; Agar, Nathalie Y R; Frado, Laura; Johnson, Mark DThe Journal of biological chemistry2010 Mar 128472-8020064927
Probing cellular mechanobiology in three-dimensional culture with collagen-agarose matrices.Ulrich, Theresa A; Jain, Amit; Tanner, Kandice; MacKay, Joanna L; Kumar, SanjayBiomaterials2010 Mar1875-8419926126
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Developmental shifts in the behavioral phenotypes of inbred mice: the role of postnatal and juvenile social experiences.Curley, J P; Rock, V; Moynihan, A M; Bateson, P; Keverne, E B; Champagne, F ABehavior genetics2010 Mar220-3220130977
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Silicon photonic microring resonators for quantitative cytokine detection and T-cell secretion analysis.Luchansky, Matthew S; Bailey, Ryan CAnalytical chemistry2010 Mar 11975-8120143780
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Pharmacogenomics of maternal tobacco use: metabolic gene polymorphisms and risk of adverse pregnancy outcomes.Aagaard-Tillery, Kjersti; Spong, Catherine Y; Thom, Elizabeth; Sibai, Baha; Wendel Jr, George; Wenstrom, Katharine; Samuels, Philip; Simhan, Hyagriv; Sorokin, Yoram; Miodovnik, Menachem; Meis, Paul; O'Sullivan, Mary J; Conway, Deborah; Wapner, Ronald J; EObstetrics and gynecology2010 Mar568-7720177288
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JISTIC: identification of significant targets in cancer.Sanchez-Garcia, Felix; Akavia, Uri David; Mozes, Eyal; Pe'er, DanaBMC bioinformatics201018920398270
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Assessment of immunologically relevant dynamic tertiary structural features of the HIV-1 V3 loop crown R2 sequence by ab initio folding.Almond, David; Cardozo, TimothyJournal of visualized experiments : JoVE201020864931
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Specific control of Pseudomonas aeruginosa surface-associated behaviors by two c-di-GMP diguanylate cyclases.Merritt, Judith H; Ha, Dae-Gon; Cowles, Kimberly N; Lu, Wenyun; Morales, Diana K; Rabinowitz, Joshua; Gitai, Zemer; O'Toole, George AmBio201020978535
A differential autoregressive modeling approach within a point process framework for non-stationary heartbeat intervals analysis.Chen, Zhe; Purdon, Patrick L; Brown, Emery N; Barbieri, RiccardoConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20103567-7021096829
Designing artificial enzymes by intuition and computation.Nanda, Vikas; Koder, Ronald LNature chemistry2010 Jan15-2421124375
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Global turnover of histone post-translational modifications and variants in human cells.Zee, Barry M; Levin, Rebecca S; Dimaggio, Peter A; Garcia, Benjamin AEpigenetics & chromatin20102221134274
Optofluidic tunable microlens by manipulating the liquid meniscus using a flared microfluidic structure.Mao, Xiaole; Stratton, Zackary I; Nawaz, Ahmad Ahsan; Lin, Sz-Chin Steven; Huang, Tony JunBiomicrofluidics20104300721267439
Carbohydrate polymers for nonviral nucleic acid delivery.Sizovs, Antons; McLendon, Patrick M; Srinivasachari, Sathya; Reineke, Theresa MTopics in current chemistry2010131-9021504102
Fabrication of biologically derived injectable materials for myocardial tissue engineering.Seif-Naraghi, Sonya; Singelyn, Jennifer; Dequach, Jessica; Schup-Magoffin, Pamela; Christman, KarenJournal of visualized experiments : JoVE201022158083
Photocatalytic Properties of Porous Silicon Nanowires.Qu, Yongquan; Zhong, Xing; Li, Yujing; Liao, Lei; Huang, Yu; Duan, XiangfengJournal of materials chemistry20103590-359422190767
A physical and regulatory map of host-influenza interactions reveals pathways in H1N1 infection.Shapira, Sagi D; Gat-Viks, Irit; Shum, Bennett O V; Dricot, Amelie; de Grace, Marciela M; Wu, Liguo; Gupta, Piyush B; Hao, Tong; Silver, Serena J; Root, David E; Hill, David E; Regev, Aviv; Hacohen, NirCell2009 Dec 241255-6720064372
Peptidomics of prolyl endopeptidase in the central nervous system.Nolte, Whitney M; Tagore, Debarati M; Lane, William S; Saghatelian, AlanBiochemistry2009 Dec 2211971-8119911840
Patternable nanowire sensors for electrochemical recording of dopamine.Tyagi, P; Postetter, D; Saragnese, D L; Randall, C L; Mirski, M A; Gracias, D HAnalytical chemistry2009 Dec 159979-8419904993
Chemical control over immune recognition: a class of antibody-recruiting small molecules that target prostate cancer.Murelli, Ryan P; Zhang, Andrew X; Michel, Julien; Jorgensen, William L; Spiegel, David AJournal of the American Chemical Society2009 Dec 217090-219888723
Self-assembly of lithographically patterned nanoparticles.Cho, Jeong-Hyun; Gracias, David HNano letters2009 Dec4049-5219681638
Electrically conductive and optically active porous silicon nanowires.Qu, Yongquan; Liao, Lei; Li, Yujing; Zhang, Hua; Huang, Yu; Duan, XiangfengNano letters2009 Dec4539-4319807130
MEK1 mutations confer resistance to MEK and B-RAF inhibition.Emery, Caroline M; Vijayendran, Krishna G; Zipser, Marie C; Sawyer, Allison M; Niu, Lili; Kim, Jessica J; Hatton, Charles; Chopra, Rajiv; Oberholzer, Patrick A; Karpova, Maria B; MacConaill, Laura E; Zhang, Jianming; Gray, Nathanael S; Sellers, William R;Proceedings of the National Academy of Sciences of the United States of America2009 Dec 120411-619915144
A synergistic small-molecule combination directly eradicates diverse prion strain structures.Roberts, Blake E; Duennwald, Martin L; Wang, Huan; Chung, Chan; Lopreiato, Nicholas P; Sweeny, Elizabeth A; Knight, M Noelle; Shorter, JamesNature chemical biology2009 Dec936-4619915541
Toward unmasking the dynamics of visual perception.Singer, Jedediah; Kreiman, GabrielNeuron2009 Nov 25446-719945387
An antibody-recruiting small molecule that targets HIV gp120.Parker, Christopher G; Domaoal, Robert A; Anderson, Karen S; Spiegel, David AJournal of the American Chemical Society2009 Nov 1816392-419839582
Label-free quantitation of a cancer biomarker in complex media using silicon photonic microring resonators.Washburn, Adam L; Gunn, L Cary; Bailey, Ryan CAnalytical chemistry2009 Nov 159499-50619848413
Multilayer DNA origami packed on a square lattice.Ke, Yonggang; Douglas, Shawn M; Liu, Minghui; Sharma, Jaswinder; Cheng, Anchi; Leung, Albert; Liu, Yan; Shih, William M; Yan, HaoJournal of the American Chemical Society2009 Nov 415903-819807088
From neurons to circuits: linear estimation of local field potentials.Rasch, Malte; Logothetis, Nikos K; Kreiman, GabrielThe Journal of neuroscience : the official journal of the Society for Neuroscience2009 Nov 413785-9619889990
Tgfbeta signal inhibition cooperates in the induction of iPSCs and replaces Sox2 and cMyc.Maherali, Nimet; Hochedlinger, KonradCurrent biology : CB2009 Nov 31718-2319765992
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Regional brain activation during verbal declarative memory in metastatic breast cancer.Kesler, Shelli R; Bennett, F Chris; Mahaffey, Misty L; Spiegel, DavidClinical cancer research : an official journal of the American Association for Cancer Research2009 Nov 16665-7319843664
GOLPH3 bridges phosphatidylinositol-4- phosphate and actomyosin to stretch and shape the Golgi to promote budding.Dippold, Holly C; Ng, Michelle M; Farber-Katz, Suzette E; Lee, Sun-Kyung; Kerr, Monica L; Peterman, Marshall C; Sim, Ronald; Wiharto, Patricia A; Galbraith, Kenneth A; Madhavarapu, Swetha; Fuchs, Greg J; Meerloo, Timo; Farquhar, Marilyn G; Zhou, Huilin; FCell2009 Oct 16337-5119837035
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Engineered myosin VI motors reveal minimal structural determinants of directionality and processivity.Liao, Jung-Chi; Elting, Mary Williard; Delp, Scott L; Spudich, James A; Bryant, ZevJournal of molecular biology2009 Oct 2862-719631216
Naturally derived myocardial matrix as an injectable scaffold for cardiac tissue engineering.Singelyn, Jennifer M; DeQuach, Jessica A; Seif-Naraghi, Sonya B; Littlefield, Robert B; Schup-Magoffin, Pamela J; Christman, Karen LBiomaterials2009 Oct5409-1619608268
Antibiotics from microbes: converging to kill.Fischbach, Michael ACurrent opinion in microbiology2009 Oct520-719695947
Glycomic analysis: an array of technologies.Krishnamoorthy, Lakshmi; Mahal, Lara KACS chemical biology2009 Sep 18715-3219728746
Novel minicircle vector for gene therapy in murine myocardial infarction.Huang, Mei; Chen, ZhiYing; Hu, Shijun; Jia, Fangjun; Li, Zongjin; Hoyt, Grant; Robbins, Robert C; Kay, Mark A; Wu, Joseph CCirculation2009 Sep 15S230-719752373
Feeder-free derivation of induced pluripotent stem cells from adult human adipose stem cells.Sun, Ning; Panetta, Nicholas J; Gupta, Deepak M; Wilson, Kitchener D; Lee, Andrew; Jia, Fangjun; Hu, Shijun; Cherry, Athena M; Robbins, Robert C; Longaker, Michael T; Wu, Joseph CProceedings of the National Academy of Sciences of the United States of America2009 Sep 1515720-519805220
P115 RhoGEF and microtubules decide the direction apoptotic cells extrude from an epithelium.Slattum, Gloria; McGee, Karen M; Rosenblatt, JodyThe Journal of cell biology2009 Sep 7693-70219720875
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Mutations in INPP5E, encoding inositol polyphosphate-5-phosphatase E, link phosphatidyl inositol signaling to the ciliopathies.Bielas, Stephanie L; Silhavy, Jennifer L; Brancati, Francesco; Kisseleva, Marina V; Al-Gazali, Lihadh; Sztriha, Laszlo; Bayoumi, Riad A; Zaki, Maha S; Abdel-Aleem, Alice; Rosti, Rasim Ozgur; Kayserili, Hulya; Swistun, Dominika; Scott, Lesley C; Bertini, ENature genetics2009 Sep1032-619668216
Animal models of epigenetic inheritance.Bocock, Philip N; Aagaard-Tillery, Kjersti MSeminars in reproductive medicine2009 Sep369-7919711247
Environmental influences on epigenetic profiles.Suter, Melissa A; Aagaard-Tillery, Kjersti MSeminars in reproductive medicine2009 Sep380-9019711248
A maternal high-fat diet is accompanied by alterations in the fetal primate metabolome.Cox, James; Williams, Sarah; Grove, Kevin; Lane, Robert H; Aagaard-Tillery, Kjersti MAmerican journal of obstetrics and gynecology2009 Sep281.e1-919733280
Character displacement: ecological and reproductive responses to a common evolutionary problem.Pfennig, Karin S; Pfennig, David WThe Quarterly review of biology2009 Sep253-7619764283
Research Spotlight: New multiparameter bioanalytical technologies for applications in personalized medicine, drug discovery and fundamental biology.Bailey, Ryan CBioanalysis2009 Sep1043-721083072
Immortalization eliminates a roadblock during cellular reprogramming into iPS cells.Utikal, Jochen; Polo, Jose M; Stadtfeld, Matthias; Maherali, Nimet; Kulalert, Warakorn; Walsh, Ryan M; Khalil, Adam; Rheinwald, James G; Hochedlinger, KonradNature2009 Aug 271145-819668190
iPS cells: insights into basic biology.Ramalho-Santos, MiguelCell2009 Aug 21616-819703387
Chd1 regulates open chromatin and pluripotency of embryonic stem cells.Gaspar-Maia, Alexandre; Alajem, Adi; Polesso, Fanny; Sridharan, Rupa; Mason, Mike J; Heidersbach, Amy; Ramalho-Santos, Joao; McManus, Michael T; Plath, Kathrin; Meshorer, Eran; Ramalho-Santos, MiguelNature2009 Aug 13863-819587682
Folding DNA into twisted and curved nanoscale shapes.Dietz, Hendrik; Douglas, Shawn M; Shih, William MScience (New York, N.Y.)2009 Aug 7725-3019661424
IRE1alpha kinase activation modes control alternate endoribonuclease outputs to determine divergent cell fates.Han, Dan; Lerner, Alana G; Vande Walle, Lieselotte; Upton, John-Paul; Xu, Weihong; Hagen, Andrew; Backes, Bradley J; Oakes, Scott A; Papa, Feroz RCell2009 Aug 7562-7519665977
Pharmacokinetics-pharmacodynamics of pyrazinamide in a novel in vitro model of tuberculosis for sterilizing effect: a paradigm for faster assessment of new antituberculosis drugs.Gumbo, Tawanda; Dona, Chandima S W Siyambalapitiyage; Meek, Claudia; Leff, RichardAntimicrobial agents and chemotherapy2009 Aug3197-20419451303
Rapid prototyping of 3D DNA-origami shapes with caDNAno.Douglas, Shawn M; Marblestone, Adam H; Teerapittayanon, Surat; Vazquez, Alejandro; Church, George M; Shih, William MNucleic acids research2009 Aug5001-619531737
TDP-43 is intrinsically aggregation-prone, and amyotrophic lateral sclerosis-linked mutations accelerate aggregation and increase toxicity.Johnson, Brian S; Snead, David; Lee, Jonathan J; McCaffery, J Michael; Shorter, James; Gitler, Aaron DThe Journal of biological chemistry2009 Jul 2420329-3919465477
Organohalogen and organophosphorous pesticide method for ginseng root--a comparison of gas chromatography-single quadrupole mass spectrometry with high resolution time-of-flight mass spectrometry.Hayward, Douglas G; Wong, Jon WAnalytical chemistry2009 Jul 155716-2319548696
Folding DNA origami from a double-stranded source of scaffold.Hogberg, Bjorn; Liedl, Tim; Shih, William MJournal of the American Chemical Society2009 Jul 89154-519566089
AKT-independent signaling downstream of oncogenic PIK3CA mutations in human cancer.Vasudevan, Krishna M; Barbie, David A; Davies, Michael A; Rabinovsky, Rosalia; McNear, Chontelle J; Kim, Jessica J; Hennessy, Bryan T; Tseng, Hsiuyi; Pochanard, Panisa; Kim, So Young; Dunn, Ian F; Schinzel, Anna C; Sandy, Peter; Hoersch, Sebastian; Sheng,Cancer cell2009 Jul 721-3219573809
Induced pluripotent stem cells and embryonic stem cells are distinguished by gene expression signatures.Chin, Mark H; Mason, Mike J; Xie, Wei; Volinia, Stefano; Singer, Mike; Peterson, Cory; Ambartsumyan, Gayane; Aimiuwu, Otaren; Richter, Laura; Zhang, Jin; Khvorostov, Ivan; Ott, Vanessa; Grunstein, Michael; Lavon, Neta; Benvenisty, Nissim; Croce, Carlo M; Cell stem cell2009 Jul 2111-2319570518
Hierarchical self-assembly of complex polyhedral microcontainers.Filipiak, David J; Azam, Anum; Leong, Timothy G; Gracias, David HJournal of micromechanics and microengineering : structures, devices, and systems2009 Jul 11-620161118
Mechanics, malignancy, and metastasis: the force journey of a tumor cell.Kumar, Sanjay; Weaver, Valerie MCancer metastasis reviews2009 Jun113-2719153673
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New fluorescence microscopy methods for microbiology: sharper, faster, and quantitative.Gitai, ZemerCurrent opinion in microbiology2009 Jun341-619356974
Quantitative determination of urea concentrations in cell culture medium.Zawada, Robert J X; Kwan, Peggy; Olszewski, Kellen L; Llinas, Manuel; Huang, Shu-GuiBiochemistry and cell biology = Biochimie et biologie cellulaire2009 Jun541-419448747
Applications of genomics in melanoma oncogene discovery.Berger, Michael F; Garraway, Levi AHematology/oncology clinics of North America2009 Jun397-414, vii19464593
In vivo generation of neurotoxic prion protein: role for hsp70 in accumulation of misfolded isoforms.Fernandez-Funez, Pedro; Casas-Tinto, Sergio; Zhang, Yan; Gomez-Velazquez, Melisa; Morales-Garza, Marco A; Cepeda-Nieto, Ana C; Castilla, Joaquin; Soto, Claudio; Rincon-Limas, Diego EPLoS genetics2009 June100050719503596
Self-assembly of DNA into nanoscale three-dimensional shapes.Douglas, Shawn M; Dietz, Hendrik; Liedl, Tim; Hogberg, Bjorn; Graf, Franziska; Shih, William MNature2009 May 21414-819458720
The mechanical rigidity of the extracellular matrix regulates the structure, motility, and proliferation of glioma cells.Ulrich, Theresa A; de Juan Pardo, Elena M; Kumar, SanjayCancer research2009 May 154167-7419435897
Type I Streptococcus pneumoniae carbohydrate utilizes a nitric oxide and MHC II-dependent pathway for antigen presentation.Velez, Christopher D; Lewis, Colleen J; Kasper, Dennis L; Cobb, Brian AImmunology2009 May73-8218778282
Label-free technologies for quantitative multiparameter biological analysis.Qavi, Abraham J; Washburn, Adam L; Byeon, Ji-Yeon; Bailey, Ryan CAnalytical and bioanalytical chemistry2009 May121-3519221722
Rational fabrication of graphene nanoribbons using a nanowire etch mask.Bai, Jingwei; Duan, Xiangfeng; Huang, YuNano letters2009 May2083-719344151
Millisecond-timescale optical control of neural dynamics in the nonhuman primate brain.Han, Xue; Qian, Xiaofeng; Bernstein, Jacob G; Zhou, Hui-Hui; Franzesi, Giovanni Talei; Stern, Patrick; Bronson, Roderick T; Graybiel, Ann M; Desimone, Robert; Boyden, Edward SNeuron2009 Apr 30191-819409264
Timing, timing, timing: fast decoding of object information from intracranial field potentials in human visual cortex.Liu, Hesheng; Agam, Yigal; Madsen, Joseph R; Kreiman, GabrielNeuron2009 Apr 30281-9019409272
Modularity and interactions in the genetics of gene expression.Litvin, Oren; Causton, Helen C; Chen, Bo-Juen; Pe'er, DanaProceedings of the National Academy of Sciences of the United States of America2009 Apr 216441-619223586
Motor mechanism for protein threading through Hsp104.Wendler, Petra; Shorter, James; Snead, David; Plisson, Celia; Clare, Daniel K; Lindquist, Susan; Saibil, Helen RMolecular cell2009 Apr 1081-9219362537
The multiple layers of ubiquitin-dependent cell cycle control.Wickliffe, Katherine; Williamson, Adam; Jin, Lingyan; Rape, MichaelChemical reviews2009 Apr1537-4819146381
Worldwide distribution of HIV type 1 epitopes recognized by human anti-V3 monoclonal antibodies.Cardozo, Timothy; Swetnam, James; Pinter, Abraham; Krachmarov, Chavdar; Nadas, Arthur; Almond, David; Zolla-Pazner, SusanAIDS research and human retroviruses2009 Apr441-5019320565
Epigenetic influences on brain development and plasticity.Fagiolini, Michela; Jensen, Catherine L; Champagne, Frances ACurrent opinion in neurobiology2009 Apr207-1219545993
Expanding the genetic code for biological studies.Wang, Qian; Parrish, Angela R; Wang, LeiChemistry & biology2009 Mar 27323-3619318213
A phosphoinositide switch controls the maturation and signaling properties of APPL endosomes.Zoncu, Roberto; Perera, Rushika M; Balkin, Daniel M; Pirruccello, Michelle; Toomre, Derek; De Camilli, PietroCell2009 Mar 201110-2119303853
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Alpha-synuclein is part of a diverse and highly conserved interaction network that includes PARK9 and manganese toxicity.Gitler, Aaron D; Chesi, Alessandra; Geddie, Melissa L; Strathearn, Katherine E; Hamamichi, Shusei; Hill, Kathryn J; Caldwell, Kim A; Caldwell, Guy A; Cooper, Antony A; Rochet, Jean-Christophe; Lindquist, SusanNature genetics2009 Mar308-1519182805
Protein nanoparticles engineered to sense kinase activity in MRI.Shapiro, Mikhail G; Szablowski, Jerzy O; Langer, Robert; Jasanoff, AlanJournal of the American Chemical Society2009 Feb 252484-619199639
Host-parasite interactions revealed by Plasmodium falciparum metabolomics.Olszewski, Kellen L; Morrisey, Joanne M; Wilinski, Daniel; Burns, James M; Vaidya, Akhil B; Rabinowitz, Joshua D; Llinas, ManuelCell host & microbe2009 Feb 19191-919218089
Stepping on the GAS: a brake pedal for melanoma metastasis?Linja, Marika; Garraway, Levi APigment cell & melanoma research2009 Feb4186019154234
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Peptidase substrates via global peptide profiling.Tagore, Debarati M; Nolte, Whitney M; Neveu, John M; Rangel, Roberto; Guzman-Rojas, Liliana; Pasqualini, Renata; Arap, Wadih; Lane, William S; Saghatelian, AlanNature chemical biology2009 Jan23-519011639
The meaning of weaning: influence of the weaning period on behavioral development in mice.Curley, James P; Jordan, Emily R; Swaney, William T; Izraelit, Asya; Kammel, Stella; Champagne, Frances ADevelopmental neuroscience2009318-3119546569
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