Research Tools
Datasheets
Fluorogenic dye datasheets
- Thiazole Orange with 2 unit PEG tail - TO1-2p
view PDF
- Malachite Green with 2 unit PEG tail - MG-2p-NH2
(membrane impermeant) view PDF - Malachite Green with 11 unit PEG tail- MG-11p-NH2
(membrane impermeant) view PDF - modified Malachite Green with 11 unit PEG tail- MG-D-11p-NH2
(membrane impermeant) view PDF - Malachite Green Ester - MG-Ester
(membrane permeant) view PDF
Computational & Analysis
| FoxS |
Fast SAXS profile computation with Debye formula |
| LigScore |
Pose & Rank - a web server for scoring protein-ligand complexes |
| ModEval |
Web server to model evaluation using TSVMod, DOPE and GA341 |
| ModLoop |
Server for modeling of loops in protein structures |
| ModWeb |
Server for automated comparative protein structure modeling |
| PCSS |
Predicts peptide recognition specificity based on sequence and structure features |
| Flex-EM |
A method for fitting and refining a component structure within its map at intermediate resolution |
| IMP |
Integrative Modeling Platform |
| MODELLER |
Program for comparative protein structure modelling by satisfaction of spatial restraints |
| MDT |
MDT prepares a raw frequency table, given information from MODELLER alignments and/or PDB files |
Vector & Sequence Data
Primary scFv sequences
- Nucleotide sequence HL1.0.1-TO1 (AM2-2) view FASTA.txt
- Nucleotide sequence HL4-MG (MG13) view FASTA.txt
- Nucleotide sequence L5-MG (MG16) view FASTA.txt
- Nucleotide sequence pBabe H6-PDGFR TM-VACHT view FASTA.txt
- Nucleotide sequence H6-MG (MG1) view FASTA.txt
Vector map datasheets
- General surface expression vector - pDisplayBlue view PDF
- Surface expression HL1.1-TO1 (scFv1) - pDisplayB-scFv1 view PDF
- General retroviral surface expression vector - pRetroDBlue view PDF
- Retroviral surface expression HL1.1-TO1 (scFv1) - pRetroDB-scFv1 view PDF
- Random tagging retroviral vector - pStealthBlue view PDF
- H6-PDGF fusion construct - pBabe H6-PDGFR TM-VACHT view PDF
- General retroviral fusion protein expression vector - pBabeSacLac2 view PDF
The Clone Database (CD) currently includes approximately 3000 strains, many of which are tagged, and approximately 300 plasmids. Each strain is listed with details such as its descriptive and formal names, genotype, genetic background, and the location of frozen stock. The CD can be assessed via the NCDIR website here |
The Standard Reference Materials (SRMs) serve a variety of clinical measurement needs. The frozen human sera and plasma materials can be used for helpful for metabolic profiling. NIST reference Standard for Serum and Plasma can be procured using the URL below. |
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