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Publication TitleAuthorsJournalPublication DatePage NoPubMedID
Leptin signaling in astrocytes regulates hypothalamic neuronal circuits and feeding.Kim, Jae Geun; Suyama, Shigetomo; Koch, Marco; Jin, Sungho; Argente-Arizon, Pilar; Argente, Jesus; Liu, Zhong-Wu; Zimmer, Marcelo R; Jeong, Jin Kwon; Szigeti-Buck, Klara; Gao, Yuanqing; Garcia-Caceres, Cristina; Yi, Chun-Xia; Salmaso, Natalina; Vaccarino,Nature neuroscience2014 Jul908-1024880214
Optical-Resolution Photoacoustic Microscopy for Volumetric and Spectral Analysis of Histological and Immunochemical Samples.Zhang, Yu Shrike; Yao, Junjie; Zhang, Chi; Li, Lei; Wang, Lihong V; Xia, YounanAngewandte Chemie (International ed. in English)2014 Jun 24NULL24961608
Aggregate-prone R120GCRYAB triggers multifaceted modifications of the thioredoxin system.Banerjee Mustafi, Soumyajit; Grose, Julianne H; Zhang, Huali; Pratt, Gregory W; Sadoshima, Junichi; Christians, Elisabeth S; Benjamin, Ivor JAntioxidants & redox signaling2014 Jun 202891-90624180415
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation.Shalek, Alex K; Satija, Rahul; Shuga, Joe; Trombetta, John J; Gennert, Dave; Lu, Diana; Chen, Peilin; Gertner, Rona S; Gaublomme, Jellert T; Yosef, Nir; Schwartz, Schraga; Fowler, Brian; Weaver, Suzanne; Wang, Jing; Wang, Xiaohui; Ding, Ruihua; RaychowdhuNature2014 Jun 19363-924919153
High-sensitivity measurements of multiple kinase activities in live single cells.Regot, Sergi; Hughey, Jacob J; Bajar, Bryce T; Carrasco, Silvia; Covert, Markus WCell2014 Jun 191724-3424949979
fast_protein_cluster: parallel and optimized clustering of large-scale protein modeling data.Hung, Ling-Hong; Samudrala, RamBioinformatics (Oxford, England)2014 Jun 151774-624532722
Pathways Disrupted in Human ALS Motor Neurons Identified through Genetic Correction of Mutant SOD1.Kiskinis, Evangelos; Sandoe, Jackson; Williams, Luis A; Boulting, Gabriella L; Moccia, Rob; Wainger, Brian J; Han, Steve; Peng, Theodore; Thams, Sebastian; Mikkilineni, Shravani; Mellin, Cassidy; Merkle, Florian T; Davis-Dusenbery, Brandi N; Ziller, MichaCell stem cell2014 Jun 5781-9524704492
Eosinophils and type 2 cytokine signaling in macrophages orchestrate development of functional beige fat.Qiu, Yifu; Nguyen, Khoa D; Odegaard, Justin I; Cui, Xiaojin; Tian, Xiaoyu; Locksley, Richard M; Palmiter, Richard D; Chawla, AjayCell2014 Jun 51292-30824906148
Measuring Fate and Rate of Single-Molecule Competition of Amplification and Restriction Digestion, and Its Use for Rapid Genotyping Tested with Hepatitis C Viral RNA.Sun, Bing; Rodriguez-Manzano, Jesus; Selck, David A; Khorosheva, Eugenia; Karymov, Mikhail A; Ismagilov, Rustem FAngewandte Chemie (International ed. in English)2014 Jun 2NULL24889060
Population code in mouse V1 facilitates readout of natural scenes through increased sparseness.Froudarakis, Emmanouil; Berens, Philipp; Ecker, Alexander S; Cotton, R James; Sinz, Fabian H; Yatsenko, Dimitri; Saggau, Peter; Bethge, Matthias; Tolias, Andreas SNature neuroscience2014 Jun851-724747577
Dimeric CRISPR RNA-guided FokI nucleases for highly specific genome editing.Tsai, Shengdar Q; Wyvekens, Nicolas; Khayter, Cyd; Foden, Jennifer A; Thapar, Vishal; Reyon, Deepak; Goodwin, Mathew J; Aryee, Martin J; Joung, J KeithNature biotechnology2014 Jun569-7624770325
Chronic, wireless recordings of large-scale brain activity in freely moving rhesus monkeys.Schwarz, David A; Lebedev, Mikhail A; Hanson, Timothy L; Dimitrov, Dragan F; Lehew, Gary; Meloy, Jim; Rajangam, Sankaranarayani; Subramanian, Vivek; Ifft, Peter J; Li, Zheng; Ramakrishnan, Arjun; Tate, Andrew; Zhuang, Katie Z; Nicolelis, Miguel A LNature methods2014 Jun670-624776634
Walking Drosophila align with the e-vector of linearly polarized light through directed modulation of angular acceleration.Velez, Mariel M; Wernet, Mathias F; Clark, Damon A; Clandinin, Thomas RJournal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology2014 Jun603-1424810784
Genomics: moving behavioural ecology beyond the phenotypic gambit.Rittschof, Clare C; Robinson, Gene EAnimal behaviour2014 Jun 1263-27024954950
Fungal Polyketide Synthase Product Chain-Length Control by Partnering Thiohydrolase.Zabala, Angelica O; Chooi, Yit-Heng; Choi, Moon Seok; Lin, Hsiao-Ching; Tang, YiACS chemical biology2014 May 29NULL24845309
Proteomic identification of monoclonal antibodies from serum.Boutz, Daniel R; Horton, Andrew P; Wine, Yariv; Lavinder, Jason J; Georgiou, George; Marcotte, Edward MAnalytical chemistry2014 May 204758-6624684310
Antibiotics induce redox-related physiological alterations as part of their lethality.Dwyer, Daniel J; Belenky, Peter A; Yang, Jason H; MacDonald, I Cody; Martell, Jeffrey D; Takahashi, Noriko; Chan, Clement T Y; Lobritz, Michael A; Braff, Dana; Schwarz, Eric G; Ye, Jonathan D; Pati, Mekhala; Vercruysse, Maarten; Ralifo, Paul S; Allison, KProceedings of the National Academy of Sciences of the United States of America2014 May 20E2100-924803433
A carbonate-forming Baeyer-Villiger monooxygenase.Hu, Youcai; Dietrich, David; Xu, Wei; Patel, Ashay; Thuss, Justin A J; Wang, Jingjing; Yin, Wen-Bing; Qiao, Kangjian; Houk, K N; Vederas, John C; Tang, YiNature chemical biology2014 May 18NULL24838010
Improved in vitro efficacy of gold nanoconstructs by increased loading of G-quadruplex aptamer.Dam, Duncan Hieu M; Lee, Raymond C; Odom, Teri WNano letters2014 May 142843-824689438
Constant growth rate can be supported by decreasing energy flux and increasing aerobic glycolysis.Slavov, Nikolai; Budnik, Bogdan A; Schwab, David; Airoldi, Edoardo M; van Oudenaarden, AlexanderCell reports2014 May 8705-1424767987
Lestaurtinib (CEP-701) attenuates "second hit" kainic acid-induced seizures following early life hypoxic seizures.Obeid, Makram; Rosenberg, Evan C; Klein, Peter M; Jensen, Frances EEpilepsy research2014 May806-1024582454
Cross-linking in the silks of bees, ants and hornets.Campbell, Peter M; Trueman, Holly E; Zhang, Qiang; Kojima, Katsura; Kameda, Tsunenori; Sutherland, Tara DInsect biochemistry and molecular biology2014 May40-5024607851
Subunit composition of glutamate and gamma-aminobutyric acid receptors in status epilepticus.Loddenkemper, Tobias; Talos, Delia M; Cleary, Ryan T; Joseph, Annelise; Sanchez Fernandez, Ivan; Alexopoulos, Andreas; Kotagal, Prakash; Najm, Imad; Jensen, Frances EEpilepsy research2014 May605-1524613745
Signaling by IL-6 promotes alternative activation of macrophages to limit endotoxemia and obesity-associated resistance to insulin.Mauer, Jan; Chaurasia, Bhagirath; Goldau, Julia; Vogt, Merly C; Ruud, Johan; Nguyen, Khoa D; Theurich, Sebastian; Hausen, A Christine; Schmitz, Joel; Bronneke, Hella S; Estevez, Emma; Allen, Tamara L; Mesaros, Andrea; Partridge, Linda; Febbraio, Mark A; CNature immunology2014 May423-3024681566
Transcriptional profiling of cells sorted by RNA abundance.Klemm, Sandy; Semrau, Stefan; Wiebrands, Kay; Mooijman, Dylan; Faddah, Dina A; Jaenisch, Rudolf; van Oudenaarden, AlexanderNature methods2014 May549-5124681693
Chaperones and cardiac misfolding protein diseases.Christians, Elisabeth S; Mustafi, Soumyajit B; Benjamin, Ivor JCurrent protein & peptide science2014 May189-20424694370
Loss of *-catenin triggers oxidative stress and impairs hematopoietic regeneration.Lento, William; Ito, Takahiro; Zhao, Chen; Harris, Jeffrey R; Huang, Wei; Jiang, Chen; Owzar, Kouros; Piryani, Sadhna; Racioppi, Luigi; Chao, Nelson; Reya, TannishthaGenes & development2014 May 1995-100424788518
Gender moderates the effect of oxytocin on social judgments.Hoge, Elizabeth A; Anderson, Eric; Lawson, Elizabeth A; Bui, Eric; Fischer, Laura E; Khadge, Shradha D; Barrett, Lisa Feldman; Simon, Naomi MHuman psychopharmacology2014 May299-30424911580
Statistical modeling of behavioral dynamics during propofol-induced loss of consciousness.Wong, Kin Foon Kevin; Smith, Anne C; Pierce, Eric T; Harrell, P Grace; Walsh, John L; Salazar-Gomez, Andres Felipe; Tavares, Casie L; Purdon, Patrick L; Brown, Emery NJournal of neuroscience methods2014 Apr 3065-7424530701
Inter-individual variation in DNA repair capacity: A need for multi-pathway functional assays to promote translational DNA repair research.Nagel, Zachary D; Chaim, Isaac A; Samson, Leona DDNA repair2014 Apr 26NULL24780560
Gender differences in oxytocin-associated disruption of decision bias during emotion perception.Lynn, Spencer K; Hoge, Elizabeth A; Fischer, Laura E; Barrett, Lisa Feldman; Simon, Naomi MPsychiatry research2014 Apr 26NULL24814142
Vasoactive intestinal polypeptide mediates circadian rhythms in mammalian olfactory bulb and olfaction.Miller, Jae-Eun Kang; Granados-Fuentes, Daniel; Wang, Thomas; Marpegan, Luciano; Holy, Timothy E; Herzog, Erik DThe Journal of neuroscience : the official journal of the Society for Neuroscience2014 Apr 236040-624760863
Protein-to-mRNA Ratios Are Conserved between Pseudomonas aeruginosa Strains.Kwon, Taejoon; Huse, Holly K; Vogel, Christine; Whiteley, Marvin; Marcotte, Edward MJournal of proteome research2014 Apr 17NULL24742327
Small-molecule RORýýt antagonists inhibit T helper 17 cell transcriptional network by divergent mechanisms.Xiao, Sheng; Yosef, Nir; Yang, Jianfei; Wang, Yonghui; Zhou, Ling; Zhu, Chen; Wu, Chuan; Baloglu, Erkan; Schmidt, Darby; Ramesh, Radha; Lobera, Mercedes; Sundrud, Mark S; Tsai, Pei-Yun; Xiang, Zhijun; Wang, Jinsong; Xu, Yan; Lin, Xichen; Kretschmer, KarstImmunity2014 Apr 17477-8924745332
Emerging applications of phase-change materials (PCMs): teaching an old dog new tricks.Hyun, Dong Choon; Levinson, Nathanael S; Jeong, Unyong; Xia, YounanAngewandte Chemie (International ed. in English)2014 Apr 73780-9524470287
Nonlinear light-sheet fluorescence microscopy by photobleaching imprinting.Gao, Liang; Zhu, Liren; Li, Chiye; Wang, Lihong VJournal of the Royal Society, Interface / the Royal Society2014 Apr 62013085124478278
Enhancing the specificity of recombinase-mediated genome engineering through dimer interface redesign.Gaj, Thomas; Sirk, Shannon J; Tingle, Ryan D; Mercer, Andrew C; Wallen, Mark C; Barbas 3rd, Carlos FJournal of the American Chemical Society2014 Apr 25047-5624611715
State dependence of noise correlations in macaque primary visual cortex.Ecker, Alexander S; Berens, Philipp; Cotton, R James; Subramaniyan, Manivannan; Denfield, George H; Cadwell, Cathryn R; Smirnakis, Stelios M; Bethge, Matthias; Tolias, Andreas SNeuron2014 Apr 2235-4824698278
Atrophy in distinct corticolimbic networks in frontotemporal dementia relates to social impairments measured using the Social Impairment Rating Scale.Bickart, Kevin C; Brickhouse, Michael; Negreira, Alyson; Sapolsky, Daisy; Barrett, Lisa Feldman; Dickerson, Bradford CJournal of neurology, neurosurgery, and psychiatry2014 Apr438-4824133285
Expanding the zinc-finger recombinase repertoire: directed evolution and mutational analysis of serine recombinase specificity determinants.Sirk, Shannon J; Gaj, Thomas; Jonsson, Andreas; Mercer, Andrew C; Barbas 3rd, Carlos FNucleic acids research2014 Apr 14755-6624452803
Modeling the dynamical effects of anesthesia on brain circuits.Ching, Shinung; Brown, Emery NCurrent opinion in neurobiology2014 Apr116-2224457211
Self-recalibrating classifiers for intracortical brain-computer interfaces.Bishop, William; Chestek, Cynthia C; Gilja, Vikash; Nuyujukian, Paul; Foster, Justin D; Ryu, Stephen I; Shenoy, Krishna V; Yu, Byron MJournal of neural engineering2014 Apr2600124503597
Neural circuits as computational dynamical systems.Sussillo, DavidCurrent opinion in neurobiology2014 Apr156-6324509098
Emotion perception, but not affect perception, is impaired with semantic memory loss.Lindquist, Kristen A; Gendron, Maria; Barrett, Lisa Feldman; Dickerson, Bradford CEmotion (Washington, D.C.)2014 Apr375-8724512242
Broad specificity profiling of TALENs results in engineered nucleases with improved DNA-cleavage specificity.Guilinger, John P; Pattanayak, Vikram; Reyon, Deepak; Tsai, Shengdar Q; Sander, Jeffry D; Joung, J Keith; Liu, David RNature methods2014 Apr429-3524531420
CRISPR-Cas systems for editing, regulating and targeting genomes.Sander, Jeffry D; Joung, J KeithNature biotechnology2014 Apr347-5524584096
Recasting the theory of mosquito-borne pathogen transmission dynamics and control.Smith, David L; Perkins, T Alex; Reiner Jr, Robert C; Barker, Christopher M; Niu, Tianchan; Chaves, Luis Fernando; Ellis, Alicia M; George, Dylan B; Le Menach, Arnaud; Pulliam, Juliet R C; Bisanzio, Donal; Buckee, Caroline; Chiyaka, Christinah; Cummings, Transactions of the Royal Society of Tropical Medicine and Hygiene2014 Apr185-9724591453
Comparison of the theoretical and real-world evolutionary potential of a genetic circuit.Razo-Mejia, M; Boedicker, J Q; Jones, D; Deluna, A; Kinney, J B; Phillips, RPhysical biology2014 Apr2600524685590
Fully motorized optical-resolution photoacoustic microscopy.Li, Lei; Yeh, Chenghung; Hu, Song; Wang, Lidai; Soetikno, Brian T; Chen, Ruimin; Zhou, Qifa; Shung, K Kirk; Maslov, Konstantin I; Wang, Lihong VOptics letters2014 Apr 12117-2024686689
Perceptions of emotion from facial expressions are not culturally universal: evidence from a remote culture.Gendron, Maria; Roberson, Debi; van der Vyver, Jacoba Marietta; Barrett, Lisa FeldmanEmotion (Washington, D.C.)2014 Apr251-6224708506
Discovery of a potent stapled helix peptide that binds to the 70N domain of replication protein A.Frank, Andreas O; Vangamudi, Bhavatarini; Feldkamp, Michael D; Souza-Fagundes, Elaine M; Luzwick, Jessica W; Cortez, David; Olejniczak, Edward T; Waterson, Alex G; Rossanese, Olivia W; Chazin, Walter J; Fesik, Stephen WJournal of medicinal chemistry2014 Mar 272455-6124491171
REST and stress resistance in ageing and Alzheimer's disease.Lu, Tao; Aron, Liviu; Zullo, Joseph; Pan, Ying; Kim, Haeyoung; Chen, Yiwen; Yang, Tun-Hsiang; Kim, Hyun-Min; Drake, Derek; Liu, X Shirley; Bennett, David A; Colaiacovo, Monica P; Yankner, Bruce ANature2014 Mar 27448-5424670762
Using SV119-Gold Nanocage Conjugates to Eradicate Cancer Stem Cells Through a Combination of Photothermal and Chemo Therapies.Sun, Tianmeng; Wang, Yi; Wang, Yucai; Xu, Jinbin; Zhao, Xin; Vangveravong, Suwanna; Mach, Robert H; Xia, YounanAdvanced healthcare materials2014 Mar 26NULL24677807
Incorporation of flexible objectives and time-linked simulation with flux balance analysis.Birch, Elsa W; Udell, Madeleine; Covert, Markus WJournal of theoretical biology2014 Mar 2121-Dec24361328
Generation of complexity in fungal terpene biosynthesis: discovery of a multifunctional cytochrome P450 in the fumagillin pathway.Lin, Hsiao-Ching; Tsunematsu, Yuta; Dhingra, Sourabh; Xu, Wei; Fukutomi, Manami; Chooi, Yit-Heng; Cane, David E; Calvo, Ana M; Watanabe, Kenji; Tang, YiJournal of the American Chemical Society2014 Mar 194426-3624568283
Whole-brain activity maps reveal stereotyped, distributed networks for visuomotor behavior.Portugues, Ruben; Feierstein, Claudia E; Engert, Florian; Orger, Michael BNeuron2014 Mar 191328-4324656252
Genetically encoded molecular probes to visualize and perturb signaling dynamics in living biological systems.Sample, Vedangi; Mehta, Sohum; Zhang, JinJournal of cell science2014 Mar 151151-6024634506
Urogenital photoacoustic endoscope.Li, Chiye; Yang, Joon-Mo; Chen, Ruimin; Yeh, Cheng-Hung; Zhu, Liren; Maslov, Konstantin; Zhou, Qifa; Kirk Shung, K; Wang, Lihong VOptics letters2014 Mar 151473-624690816
The transcription factor titration effect dictates level of gene expression.Brewster, Robert C; Weinert, Franz M; Garcia, Hernan G; Song, Dan; Rydenfelt, Mattias; Phillips, RobCell2014 Mar 131312-2324612990
Long term stability of nanowire nanoelectronics in physiological environments.Zhou, Wei; Dai, Xiaochuan; Fu, Tian-Ming; Xie, Chong; Liu, Jia; Lieber, Charles MNano letters2014 Mar 121614-924479700
Ferromagnetic nanoparticles with peroxidase-like activity enhance the cleavage of biological macromolecules for biofilm elimination.Gao, Lizeng; Giglio, Krista M; Nelson, Jacquelyn L; Sondermann, Holger; Travis, Alexander JNanoscale2014 Mar 72588-9324468900
Medicine. Combating evolution to fight disease.Rosenberg, Susan M; Queitsch, ChristineScience (New York, N.Y.)2014 Mar 71088-924604189
Common genetic variants modulate pathogen-sensing responses in human dendritic cells.Lee, Mark N; Ye, Chun; Villani, Alexandra-Chloe; Raj, Towfique; Li, Weibo; Eisenhaure, Thomas M; Imboywa, Selina H; Chipendo, Portia I; Ran, F Ann; Slowikowski, Kamil; Ward, Lucas D; Raddassi, Khadir; McCabe, Cristin; Lee, Michelle H; Frohlich, Irene Y; HScience (New York, N.Y.)2014 Mar 7124698024604203
Approach for targeting Ras with small molecules that activate SOS-mediated nucleotide exchange.Burns, Michael C; Sun, Qi; Daniels, R Nathan; Camper, DeMarco; Kennedy, J Phillip; Phan, Jason; Olejniczak, Edward T; Lee, Taekyu; Waterson, Alex G; Rossanese, Olivia W; Fesik, Stephen WProceedings of the National Academy of Sciences of the United States of America2014 Mar 43401-624550516
Trends in antibiotic resistance in coagulase-negative staphylococci in the United States, 1999 to 2012.May, Larissa; Klein, Eili Y; Rothman, Richard E; Laxminarayan, RamananAntimicrobial agents and chemotherapy2014 Mar1404-924342646
Large-scale mapping of transposable element insertion sites using digital encoding of sample identity.Gohl, Daryl M; Freifeld, Limor; Silies, Marion; Hwa, Jennifer J; Horowitz, Mark; Clandinin, Thomas RGenetics2014 Mar615-2324374352
Cortical activity in the null space: permitting preparation without movement.Kaufman, Matthew T; Churchland, Mark M; Ryu, Stephen I; Shenoy, Krishna VNature neuroscience2014 Mar440-824487233
Lis1 regulates asymmetric division in hematopoietic stem cells and in leukemia.Zimdahl, Bryan; Ito, Takahiro; Blevins, Allen; Bajaj, Jeevisha; Konuma, Takaaki; Weeks, Joi; Koechlein, Claire S; Kwon, Hyog Young; Arami, Omead; Rizzieri, David; Broome, H Elizabeth; Chuah, Charles; Oehler, Vivian G; Sasik, Roman; Hardiman, Gary; Reya, TNature genetics2014 Mar245-5224487275
Bacteriophages use an expanded genetic code on evolutionary paths to higher fitness.Hammerling, Michael J; Ellefson, Jared W; Boutz, Daniel R; Marcotte, Edward M; Ellington, Andrew D; Barrick, Jeffrey ENature chemical biology2014 Mar178-8024487692
Integrated photoacoustic, confocal, and two-photon microscope.Rao, Bin; Soto, Florentina; Kerschensteiner, Daniel; Wang, Lihong VJournal of biomedical optics2014 Mar3600224589986
Calibration-free absolute quantification of particle concentration by statistical analyses of photoacoustic signals in vivo.Zhou, Yong; Yao, Junjie; Maslov, Konstantin I; Wang, Lihong VJournal of biomedical optics2014 Mar3700124589987
Dependence of optical scattering from Intralipid in gelatin-gel based tissue-mimicking phantoms on mixing temperature and time.Lai, Puxiang; Xu, Xiao; Wang, Lihong VJournal of biomedical optics2014 Mar3500224604534
Comprehensive proteomic profiling of outer membrane vesicles from Campylobacter jejuni.Jang, Kyoung-Soon; Sweredoski, Michael J; Graham, Robert L J; Hess, Sonja; Clemons Jr, William MJournal of proteomics2014 Feb 2690-824382552
Neurite outgrowth on electrospun nanofibers with uniaxial alignment: the effects of fiber density, surface coating, and supporting substrate.Xie, Jingwei; Liu, Wenying; MacEwan, Matthew R; Bridgman, Paul C; Xia, YounanACS nano2014 Feb 251878-8524444076
CMV Infection, TLR-2 and -4 Expression, and Cytokine Profiles in Early-Onset Preeclampsia with HELLP Syndrome.Xie, Fang; von Dadelszen, Peter; Nadeau, JosephAmerican journal of reproductive immunology (New York, N.Y. : 1989)2014 Feb 24NULL24612145
The future of whole-cell modeling.Macklin, Derek N; Ruggero, Nicholas A; Covert, Markus WCurrent opinion in biotechnology2014 Feb 17111-11524556244
Intranasal epidermal growth factor treatment rescues neonatal brain injury.Scafidi, Joseph; Hammond, Timothy R; Scafidi, Susanna; Ritter, Jonathan; Jablonska, Beata; Roncal, Maria; Szigeti-Buck, Klara; Coman, Daniel; Huang, Yuegao; McCarter Jr, Robert J; Hyder, Fahmeed; Horvath, Tamas L; Gallo, VittorioNature2014 Feb 13230-424390343
Structural insights on the role of antibodies in HIV-1 vaccine and therapy.West Jr, Anthony P; Scharf, Louise; Scheid, Johannes F; Klein, Florian; Bjorkman, Pamela J; Nussenzweig, Michel CCell2014 Feb 13633-4824529371
Lipid Modulation of Calcium Flux through CaV2.3 Regulates Acrosome Exocytosis and Fertilization.Cohen, Roy; Buttke, Danielle E; Asano, Atsushi; Mukai, Chinatsu; Nelson, Jacquelyn L; Ren, Dongjun; Miller, Richard J; Cohen-Kutner, Moshe; Atlas, Daphne; Travis, Alexander JDevelopmental cell2014 Feb 10310-2124525187
Cultural Relativity in Perceiving Emotion From Vocalizations.Gendron, Maria; Roberson, Debi; van der Vyver, Jacoba Marieta; Barrett, Lisa FeldmanPsychological science2014 Feb 5NULL24501109
Grafting aptamers onto gold nanostars increases in vitro efficacy in a wide range of cancer cell types.Dam, Duncan Hieu M; Culver, Kayla S B; Odom, Teri WMolecular pharmaceutics2014 Feb 3580-724422969
Serotonergic neuron regulation informed by in vivo single-cell transcriptomics.Spaethling, Jennifer M; Piel, David; Dueck, Hannah; Buckley, Peter T; Morris, Jacqueline F; Fisher, Stephen A; Lee, Jaehee; Sul, Jai-Yoon; Kim, Junhyong; Bartfai, Tamas; Beck, Sheryl G; Eberwine, James HFASEB journal : official publication of the Federation of American Societies for Experimental Biology2014 Feb771-8024192459
Likelihood methods for point processes with refractoriness.Citi, Luca; Ba, Demba; Brown, Emery N; Barbieri, RiccardoNeural computation2014 Feb237-6324206384
Statistical approach to protein quantification.Gerster, Sarah; Kwon, Taejoon; Ludwig, Christina; Matondo, Mariette; Vogel, Christine; Marcotte, Edward M; Aebersold, Ruedi; Buhlmann, PeterMolecular & cellular proteomics : MCP2014 Feb666-7724255132
Flies and humans share a motion estimation strategy that exploits natural scene statistics.Clark, Damon A; Fitzgerald, James E; Ales, Justin M; Gohl, Daryl M; Silies, Marion A; Norcia, Anthony M; Clandinin, Thomas RNature neuroscience2014 Feb296-30324390225
Transcriptome in vivo analysis (TIVA) of spatially defined single cells in live tissue.Lovatt, Ditte; Ruble, Brittani K; Lee, Jaehee; Dueck, Hannah; Kim, Tae Kyung; Fisher, Stephen; Francis, Chantal; Spaethling, Jennifer M; Wolf, John A; Grady, M Sean; Ulyanova, Alexandra V; Yeldell, Sean B; Griepenburg, Julianne C; Buckley, Peter T; Kim, JNature methods2014 Feb190-624412976
Spatially Fourier-encoded photoacoustic microscopy using a digital micromirror device.Liang, Jinyang; Gao, Liang; Li, Chiye; Wang, Lihong VOptics letters2014 Feb 1430-324487832
Metabolite Profiling of 5'-AMP-Induced Hypometabolism.Zhao, Zhaoyang; Van Oort, Anita; Tao, Zhenyin; O'Brien 3rd, William G; Lee, Cheng ChiMetabolomics : Official journal of the Metabolomic Society2014 Feb 163-7624511307
Intention estimation in brain-machine interfaces.Fan, Joline M; Nuyujukian, Paul; Kao, Jonathan C; Chestek, Cynthia A; Ryu, Stephen I; Shenoy, Krishna VJournal of neural engineering2014 Feb1600424654266
The Determinants of Federal and State Enforcement of Workplace Safety Regulations: OSHA Inspections 1990-2010.Jung, Juergen; Makowsky, Michael DJournal of regulatory economics2014 Feb 1Jan-3324659856
Males shorten the life span of C. elegans hermaphrodites via secreted compounds.Maures, Travis J; Booth, Lauren N; Benayoun, Berenice A; Izrayelit, Yevgeniy; Schroeder, Frank C; Brunet, AnneScience (New York, N.Y.)2014 Jan 31541-424292626
Neonatal insulin action impairs hypothalamic neurocircuit formation in response to maternal high-fat feeding.Vogt, Merly C; Paeger, Lars; Hess, Simon; Steculorum, Sophie M; Awazawa, Motoharu; Hampel, Brigitte; Neupert, Susanne; Nicholls, Hayley T; Mauer, Jan; Hausen, A Christine; Predel, Reinhard; Kloppenburg, Peter; Horvath, Tamas L; Bruning, Jens CCell2014 Jan 30495-50924462248
Improving CRISPR-Cas nuclease specificity using truncated guide RNAs.Fu, Yanfang; Sander, Jeffry D; Reyon, Deepak; Cascio, Vincent M; Joung, J KeithNature biotechnology2014 Jan 26NULL24463574
Neural Dynamics of Reaching following Incorrect or Absent Motor Preparation.Ames, K Cora; Ryu, Stephen I; Shenoy, Krishna VNeuron2014 Jan 22438-5124462104
FuseFISH: robust detection of transcribed gene fusions in single cells.Semrau, Stefan; Crosetto, Nicola; Bienko, Magda; Boni, Marina; Bernasconi, Paolo; Chiarle, Roberto; van Oudenaarden, AlexanderCell reports2014 Jan 1618-2324373969
PIWI proteins and PIWI-interacting RNAs in the soma.Ross, Robert J; Weiner, Molly M; Lin, HaifanNature2014 Jan 16353-924429634
Inconvenient truths in the pursuit of scientific knowledge and public health.Relman, David AThe Journal of infectious diseases2014 Jan 15170-224106297
PIWI proteins are essential for early Drosophila embryogenesis.Mani, Sneha Ramesh; Megosh, Heather; Lin, HaifanDevelopmental biology2014 Jan 15340-924184635
Fabrication of Cell Patches Using Biodegradable Scaffolds with a Hexagonal Array of Interconnected Pores (SHAIPs).Zhang, Yu Shrike; Yao, Junjie; Wang, Lihong V; Xia, YounanPolymer2014 Jan 14445-45224443593
Comparing protein folding in vitro and in vivo: foldability meets the fitness challenge.Hingorani, Karan S; Gierasch, Lila MCurrent opinion in structural biology2014 Jan 1381-9024434632
Using well-defined Ag nanocubes as substrates to quantify the spatial resolution and penetration depth of surface-enhanced Raman scattering imaging.Moran, Christine H; Rycenga, Matthew; Xia, Xiaohu; Cobley, Claire M; Xia, YounanNanotechnology2014 Jan 101400724334508
Photoimprint photoacoustic microscopy for three-dimensional label-free subdiffraction imaging.Yao, Junjie; Wang, Lidai; Li, Chiye; Zhang, Chi; Wang, Lihong VPhysical review letters2014 Jan 101430224483902
Mycobacteria manipulate macrophage recruitment through coordinated use of membrane lipids.Cambier, C J; Takaki, Kevin K; Larson, Ryan P; Hernandez, Rafael E; Tobin, David M; Urdahl, Kevin B; Cosma, Christine L; Ramakrishnan, LalitaNature2014 Jan 9218-2224336213
Noninvasive prenatal diagnosis in a fetus at risk for methylmalonic acidemia.Gu, Wei; Koh, Winston; Blumenfeld, Yair J; El-Sayed, Yasser Y; Hudgins, Louanne; Hintz, Susan R; Quake, Stephen RGenetics in medicine : official journal of the American College of Medical Genetics2014 Jan 9NULL24406457
The impact of heterogeneous transmission on the establishment and spread of antimalarial drug resistance.Klein, Eili YJournal of theoretical biology2014 Jan 7177-8524076451
Is there consistency and specificity of autonomic changes during emotional episodes? Guidance from the Conceptual Act Theory and psychophysiology.Quigley, Karen S; Barrett, Lisa FeldmanBiological psychology2014 Jan 2NULL24388802
Expanding the scope of site-specific recombinases for genetic and metabolic engineering.Gaj, Thomas; Sirk, Shannon J; Barbas 3rd, Carlos FBiotechnology and bioengineering2014 Jan4165423982993
Cross-reactive immune responses as primary drivers of malaria chronicity.Klein, Eili Y; Graham, Andrea L; Llinas, Manuel; Levin, SimonInfection and immunity2014 Jan140-5124126530
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Silver nanocube on gold microplate as a well-defined and highly active substrate for SERS detection.Xia, Xiaohu; Rycenga, Matthew; Qin, Dong; Xia, YounanJournal of materials chemistry. C, Materials for optical and electronic devices2013 Oct 14NULL24187611
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Nanoelectronics Meets Biology: From New Nanoscale Devices for Live-Cell Recording to 3D Innervated Tissues.Duan, Xiaojie; Lieber, Charles MChemistry, an Asian journal2013 Oct2304-1423946279
Targeted deletion and inversion of tandemly arrayed genes in Arabidopsis thaliana using zinc finger nucleases.Qi, Yiping; Li, Xiaohong; Zhang, Yong; Starker, Colby G; Baltes, Nicholas J; Zhang, Feng; Sander, Jeffry D; Reyon, Deepak; Joung, J Keith; Voytas, Daniel FG3 (Bethesda, Md.)2013 Oct1707-1523979943
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A brain-machine interface for control of medically-induced coma.Shanechi, Maryam M; Chemali, Jessica J; Liberman, Max; Solt, Ken; Brown, Emery NPLoS computational biology2013 Octe100328424204231
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A coaxial optrode as multifunction write-read probe for optogenetic studies in non-human primates.Ozden, Ilker; Wang, Jing; Lu, Yao; May, Travis; Lee, Joonhee; Goo, Werapong; O'Shea, Daniel J; Kalanithi, Paul; Diester, Ilka; Diagne, Mohamed; Deisseroth, Karl; Shenoy, Krishna V; Nurmikko, Arto VJournal of neuroscience methods2013 Sep 30142-5423867081
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Phospholipase B is activated in response to sterol removal and stimulates acrosome exocytosis in murine sperm.Asano, Atsushi; Nelson-Harrington, Jacquelyn L; Travis, Alexander JThe Journal of biological chemistry2013 Sep 2728104-1523943622
Microscale polymer bottles corked with a phase-change material for temperature-controlled release.Hyun, Dong Choon; Lu, Ping; Choi, Sang-Il; Jeong, Unyong; Xia, YounanAngewandte Chemie (International ed. in English)2013 Sep 2710468-7123959631
Circadian gene Bmal1 regulates diurnal oscillations of Ly6C(hi) inflammatory monocytes.Nguyen, Khoa D; Fentress, Sarah J; Qiu, Yifu; Yun, Karen; Cox, Jeffery S; Chawla, AjayScience (New York, N.Y.)2013 Sep 271483-823970558
Mitofusin 2 in POMC Neurons Connects ER Stress with Leptin Resistance and Energy Imbalance.Schneeberger, Marc; Dietrich, Marcelo O; Sebastian, David; Imbernon, Monica; Castano, Carlos; Garcia, Ainhoa; Esteban, Yaiza; Gonzalez-Franquesa, Alba; Rodriguez, Ignacio Castrillon; Bortolozzi, Analia; Garcia-Roves, Pablo M; Gomis, Ramon; Nogueiras, RubeCell2013 Sep 26172-8724074867
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The Role of Aromatic-Aromatic Interactions in Strand-Strand Stabilization of ýý-Sheets.Budyak, Ivan L; Zhuravleva, Anastasia; Gierasch, Lila MJournal of molecular biology2013 Sep 233522-3523810905
Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein.Feldkamp, Michael D; Frank, Andreas O; Kennedy, J Phillip; Patrone, James D; Vangamudi, Bhavatarini; Waterson, Alex G; Fesik, Stephen W; Chazin, Walter JBiochemistry2013 Sep 176515-2423962067
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Coordination of heart and lung co-development by a multipotent cardiopulmonary progenitor.Peng, Tien; Tian, Ying; Boogerd, Cornelis J; Lu, Min Min; Kadzik, Rachel S; Stewart, Kathleen M; Evans, Sylvia M; Morrisey, Edward ENature2013 Aug 29589-9223873040
Optical control of mammalian endogenous transcription and epigenetic states.Konermann, Silvana; Brigham, Mark D; Trevino, Alexandro E; Hsu, Patrick D; Heidenreich, Matthias; Cong, Le; Platt, Randall J; Scott, David A; Church, George M; Zhang, FengNature2013 Aug 22472-623877069
RNA Replicon Delivery via Lipid-Complexed PRINT Protein Particles.Xu, Jing; Luft, J Christopher; Yi, Xianwen; Tian, Shaomin; Owens, Gary; Wang, Jin; Johnson, Ashley; Berglund, Peter; Smith, Jonathan; Napier, Mary E; Desimone, Joseph MMolecular pharmaceutics2013 Aug 21NULL23924216
Optical-resolution photoacoustic microscopy: auscultation of biological systems at the cellular level.Hu, Song; Wang, Lihong VBiophysical journal2013 Aug 20841-723972836
Spinal projection neurons control turning behaviors in zebrafish.Huang, Kuo-Hua; Ahrens, Misha B; Dunn, Timothy W; Engert, FlorianCurrent biology : CB2013 Aug 191566-7323910662
Enhancement of photoacoustic tomography by ultrasonic computed tomography based on optical excitation of elements of a full-ring transducer array.Xia, Jun; Huang, Chao; Maslov, Konstantin; Anastasio, Mark A; Wang, Lihong VOptics letters2013 Aug 153140-324104670
Salmonella require the fatty acid regulator PPARýý for the establishment of a metabolic environment essential for long-term persistence.Eisele, Nicholas A; Ruby, Thomas; Jacobson, Amanda; Manzanillo, Paolo S; Cox, Jeffery S; Lam, Lilian; Mukundan, Lata; Chawla, Ajay; Monack, Denise MCell host & microbe2013 Aug 14171-8223954156
Allele-specific detection of single mRNA molecules in situ.Hansen, Clinton H; van Oudenaarden, AlexanderNature methods2013 Aug 11NULL23934076
HCN4 dynamically marks the first heart field and conduction system precursors.Liang, Xingqun; Wang, Gang; Lin, Lizhu; Lowe, Jennifer; Zhang, Qingquan; Bu, Lei; Chen, Yihan; Chen, Ju; Sun, Yunfu; Evans, Sylvia MCirculation research2013 Aug 2399-40723743334
Encoding through patterns: regression tree-based neuronal population models.Haslinger, Robert; Pipa, Gordon; Lewis, Laura D; Nikolic, Danko; Williams, Ziv; Brown, EmeryNeural computation2013 Aug1953-9323607564
IL-7 production in murine lymphatic endothelial cells and induction in the setting of peripheral lymphopenia.Miller, Corey N; Hartigan-O'Connor, Dennis J; Lee, Myeong Sup; Laidlaw, Grace; Cornelissen, Ivo P; Matloubian, Mehrdad; Coughlin, Shaun R; McDonald, Donald M; McCune, Joseph MInternational immunology2013 Aug471-8323657000
The roles of monkey M1 neuron classes in movement preparation and execution.Kaufman, Matthew T; Churchland, Mark M; Shenoy, Krishna VJournal of neurophysiology2013 Aug817-2523699057
Untangling the web: the diverse functions of the PIWI/piRNA pathway.Mani, Sneha Ramesh; Juliano, Celina EMolecular reproduction and development2013 Aug632-6423712694
A closed-loop anesthetic delivery system for real-time control of burst suppression.Liberman, Max Y; Ching, Shinung; Chemali, Jessica; Brown, Emery NJournal of neural engineering2013 Aug4600423744607
The aging brain and anesthesia.Brown, Emery N; Purdon, Patrick LCurrent opinion in anaesthesiology2013 Aug414-923820102
TB: the Yin and Yang of lipid mediators.Tobin, David M; Ramakrishnan, LalitaCurrent opinion in pharmacology2013 Aug641-523849093
Random-access optical-resolution photoacoustic microscopy using a digital micromirror device.Liang, Jinyang; Zhou, Yong; Winkler, Amy W; Wang, Lidai; Maslov, Konstantin I; Li, Chiye; Wang, Lihong VOptics letters2013 Aug 12683-623903111
Calibration-free quantification of absolute oxygen saturation based on the dynamics of photoacoustic signals.Xia, Jun; Danielli, Amos; Liu, Yan; Wang, Lidai; Maslov, Konstantin; Wang, Lihong VOptics letters2013 Aug 12800-323903146
Nanometre-scale thermometry in a living cell.Kucsko, G; Maurer, P C; Yao, N Y; Kubo, M; Noh, H J; Lo, P K; Park, H; Lukin, M DNature2013 Aug 154-823903748
Issues related to development of antiepileptogenic therapies.Pitkanen, Asla; Nehlig, Astrid; Brooks-Kayal, Amy R; Dudek, F Edward; Friedman, Daniel; Galanopoulou, Aristea S; Jensen, Frances E; Kaminski, Rafal M; Kapur, Jaideep; Klitgaard, Henrik; Loscher, Wolfgang; Mody, Istvan; Schmidt, DieterEpilepsia2013 Aug35-4323909852
Issues related to symptomatic and disease-modifying treatments affecting cognitive and neuropsychiatric comorbidities of epilepsy.Brooks-Kayal, Amy R; Bath, Kevin G; Berg, Anne T; Galanopoulou, Aristea S; Holmes, Gregory L; Jensen, Frances E; Kanner, Andres M; O'Brien, Terence J; Whittemore, Vicky H; Winawer, Melodie R; Patel, Manisha; Scharfman, Helen EEpilepsia2013 Aug44-6023909853
Epilepsy biomarkers.Engel Jr, Jerome; Pitkanen, Asla; Loeb, Jeffrey A; Dudek, F Edward; Bertram 3rd, Edward H; Cole, Andrew J; Moshe, Solomon L; Wiebe, Samuel; Jensen, Frances E; Mody, Istvan; Nehlig, Astrid; Vezzani, AnnamariaEpilepsia2013 Aug61-923909854
Nanoelectronics-biology frontier: From nanoscopic probes for action potential recording in live cells to three-dimensional cyborg tissues.Duan, Xiaojie; Fu, Tian-Ming; Liu, Jia; Lieber, Charles MNano today2013 Aug 1351-37324073014
RNA interference knockdown of DNA methyl-transferase 3 affects gene alternative splicing in the honey bee.Li-Byarlay, Hongmei; Li, Yang; Stroud, Hume; Feng, Suhua; Newman, Thomas C; Kaneda, Megan; Hou, Kirk K; Worley, Kim C; Elsik, Christine G; Wickline, Samuel A; Jacobsen, Steven E; Ma, Jian; Robinson, Gene EProceedings of the National Academy of Sciences of the United States of America2013 Jul 3012750-523852726
Expression of Isl1 during mouse development.Zhuang, Shaowei; Zhang, Qingquan; Zhuang, Tao; Evans, Sylvia M; Liang, Xingqun; Sun, YunfuGene expression patterns : GEP2013 Jul 29407-41223906961
A neurodegeneration-specific gene-expression signature of acutely isolated microglia from an amyotrophic lateral sclerosis mouse model.Chiu, Isaac M; Morimoto, Emiko T A; Goodarzi, Hani; Liao, Jennifer T; O'Keeffe, Sean; Phatnani, Hemali P; Muratet, Michael; Carroll, Michael C; Levy, Shawn; Tavazoie, Saeed; Myers, Richard M; Maniatis, TomCell reports2013 Jul 25385-40123850290
Expanding the structural diversity of polyketides by exploring the cofactor tolerance of an inline methyltransferase domain.Winter, Jaclyn M; Chiou, Grace; Bothwell, Ian R; Xu, Wei; Garg, Neil K; Luo, Minkui; Tang, YiOrganic letters2013 Jul 193774-723837609
Optical clearing-aided photoacoustic microscopy with enhanced resolution and imaging depth.Zhou, Yong; Yao, Junjie; Wang, Lihong VOptics letters2013 Jul 152592-523939121
Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A.Patrone, James D; Kennedy, J Phillip; Frank, Andreas O; Feldkamp, Michael D; Vangamudi, Bhavatarini; Pelz, Nicholas F; Rossanese, Olivia W; Waterson, Alex G; Chazin, Walter J; Fesik, Stephen WACS medicinal chemistry letters2013 Jul 11601-60523914285
Dysbiosis of the gut microbiota is associated with hiv disease progression and tryptophan catabolism.Vujkovic-Cvijin, Ivan; Dunham, Richard M; Iwai, Shoko; Maher, Michael C; Albright, Rebecca G; Broadhurst, Mara J; Hernandez, Ryan D; Lederman, Michael M; Huang, Yong; Somsouk, Ma; Deeks, Steven G; Hunt, Peter W; Lynch, Susan V; McCune, Joseph MScience translational medicine2013 Jul 10193ra9123843452
Modular use of peripheral input channels tunes motion-detecting circuitry.Silies, Marion; Gohl, Daryl M; Fisher, Yvette E; Freifeld, Limor; Clark, Damon A; Clandinin, Thomas RNeuron2013 Jul 10111-2723849199
Cortical control of arm movements: a dynamical systems perspective.Shenoy, Krishna V; Sahani, Maneesh; Churchland, Mark MAnnual review of neuroscience2013 Jul 8337-5923725001
Specific kinematics and motor-related neurons for aversive chemotaxis in Drosophila.Gao, Xiaojing J; Potter, Christopher J; Gohl, Daryl M; Silies, Marion; Katsov, Alexander Y; Clandinin, Thomas R; Luo, LiqunCurrent biology : CB2013 Jul 81163-7223770185
Modeling Spatial Correlation of DNA Deformation: DNA Allostery in Protein Binding.Xu, Xinliang; Ge, Hao; Gu, Chan; Gao, Yi Qin; Wang, Siyuan S; Thio, Beng Joo Reginald; Hynes, James T; Xie, X Sunney; Cao, JianshuThe journal of physical chemistry. B2013 Jul 8NULL23795567
R-loops and nicks initiate DNA breakage and genome instability in non-growing Escherichia coli.Wimberly, Hallie; Shee, Chandan; Thornton, P C; Sivaramakrishnan, Priya; Rosenberg, Susan M; Hastings, P JNature communications2013 Jul 5211523828459
Great ape genetic diversity and population history.Prado-Martinez, Javier; Sudmant, Peter H; Kidd, Jeffrey M; Li, Heng; Kelley, Joanna L; Lorente-Galdos, Belen; Veeramah, Krishna R; Woerner, August E; O'Connor, Timothy D; Santpere, Gabriel; Cagan, Alexander; Theunert, Christoph; Casals, Ferran; Laayouni, Nature2013 Jul 3NULL23823723
Thalamocortical mechanisms for the anteriorization of alpha rhythms during propofol-induced unconsciousness.Vijayan, Sujith; Ching, Shinung; Purdon, Patrick L; Brown, Emery N; Kopell, Nancy JThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Jul 311070-523825412
Cell-based measures of viral persistence are associated with immune activation and programmed cell death protein 1 (PD-1)-expressing CD4+ T cells.Hatano, Hiroyu; Jain, Vivek; Hunt, Peter W; Lee, Tzong-Hae; Sinclair, Elizabeth; Do, Tri D; Hoh, Rebecca; Martin, Jeffrey N; McCune, Joseph M; Hecht, Frederick; Busch, Michael P; Deeks, Steven GThe Journal of infectious diseases2013 Jul50-623089590
The relation between valence and arousal in subjective experience.Kuppens, Peter; Tuerlinckx, Francis; Russell, James A; Barrett, Lisa FeldmanPsychological bulletin2013 Jul917-4023231533
ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering.Gaj, Thomas; Gersbach, Charles A; Barbas 3rd, Carlos FTrends in biotechnology2013 Jul397-40523664777
A Reactive Oxygen Species (ROS)-Responsive Polymer for Safe, Efficient, and Targeted Gene Delivery in Cancer Cells.Shim, Min Suk; Xia, YounanAngewandte Chemie (International ed. in English)2013 Jul 16926-923716349
The cortical angiome: an interconnected vascular network with noncolumnar patterns of blood flow.Blinder, Pablo; Tsai, Philbert S; Kaufhold, John P; Knutsen, Per M; Suhl, Harry; Kleinfeld, DavidNature neuroscience2013 Jul889-9723749145
A bacterial export system for generating extracellular amyloid aggregates.Sivanathan, Viknesh; Hochschild, AnnNature protocols2013 Jul1381-9023787895
Engineering customized TALE nucleases (TALENs) and TALE transcription factors by fast ligation-based automatable solid-phase high-throughput (FLASH) assembly.Reyon, Deepak; Maeder, Morgan L; Khayter, Cyd; Tsai, Shengdar Q; Foley, Jonathan E; Sander, Jeffry D; Joung, J KeithCurrent protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.]2013 JulUnit 12.1623821439
Stochastic cytokine expression induces mixed T helper cell States.Fang, Miaoqing; Xie, Huangming; Dougan, Stephanie K; Ploegh, Hidde; van Oudenaarden, AlexanderPLoS biology2013 Jule100161823935453
Choroid-plexus-derived Otx2 homeoprotein constrains adult cortical plasticity.Spatazza, Julien; Lee, Henry H C; Di Nardo, Ariel A; Tibaldi, Lorenzo; Joliot, Alain; Hensch, Takao K; Prochiantz, AlainCell reports2013 Jun 271815-2323770240
Homeostatic regulation of dendritic dynamics in a motor map in vivo.Kishore, Sandeep; Fetcho, Joseph RNature communications2013 Jun 27208623803587
High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells.Fu, Yanfang; Foden, Jennifer A; Khayter, Cyd; Maeder, Morgan L; Reyon, Deepak; Joung, J Keith; Sander, Jeffry DNature biotechnology2013 Jun 23NULL23792628
GABAergic lateral interactions tune the early stages of visual processing in Drosophila.Freifeld, Limor; Clark, Damon A; Schnitzer, Mark J; Horowitz, Mark A; Clandinin, Thomas RNeuron2013 Jun 191075-8923791198
piggyBac transposase tools for genome engineering.Li, Xianghong; Burnight, Erin R; Cooney, Ashley L; Malani, Nirav; Brady, Troy; Sander, Jeffry D; Staber, Janice; Wheelan, Sarah J; Joung, J Keith; McCray Jr, Paul B; Bushman, Frederic D; Sinn, Patrick L; Craig, Nancy LProceedings of the National Academy of Sciences of the United States of America2013 Jun 18E2279-8723723351
Photoacoustic and optical coherence tomography of epilepsy with high temporal and spatial resolution and dual optical contrasts.Tsytsarev, Vassiliy; Rao, Bin; Maslov, Konstantin I; Li, Li; Wang, Lihong VJournal of neuroscience methods2013 Jun 15142-523603664
Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells.Shalek, Alex K; Satija, Rahul; Adiconis, Xian; Gertner, Rona S; Gaublomme, Jellert T; Raychowdhury, Raktima; Schwartz, Schraga; Yosef, Nir; Malboeuf, Christine; Lu, Diana; Trombetta, John J; Gennert, Dave; Gnirke, Andreas; Goren, Alon; Hacohen, Nir; LevinNature2013 Jun 13236-4023685454
Real-time Closed-loop Control in a Rodent Model of Medically Induced Coma Using Burst Suppression.Ching, Shinung; Liberman, Max Y; Chemali, Jessica J; Westover, M Brandon; Kenny, Jonathan; Solt, Ken; Purdon, Patrick L; Brown, Emery NAnesthesiology2013 Jun 13NULL23770601
Synthetic nanoelectronic probes for biological cells and tissues.Tian, Bozhi; Lieber, Charles MAnnual review of analytical chemistry (Palo Alto, Calif.)2013 Jun 1231-5123451719
Microbial persistence and the road to drug resistance.Cohen, Nadia R; Lobritz, Michael A; Collins, James JCell host & microbe2013 Jun 12632-4223768488
Eosinophils secrete IL-4 to facilitate liver regeneration.Goh, Y P Sharon; Henderson, Neil C; Heredia, Jose E; Red Eagle, Alex; Odegaard, Justin I; Lehwald, Nadja; Nguyen, Khoa D; Sheppard, Dean; Mukundan, Lata; Locksley, Richard M; Chawla, AjayProceedings of the National Academy of Sciences of the United States of America2013 Jun 119914-923716700
Discovery of Cryptic Polyketide Metabolites from Dermatophytes Using Heterologous Expression in Aspergillus nidulans.Yin, Wen-Bing; Chooi, Yit Heng; Smith, Adam R; Cacho, Ralph A; Hu, Youcai; White, Theodore C; Tang, YiACS synthetic biology2013 Jun 1123758576
Computational analysis of anti-HIV-1 antibody neutralization panel data to identify potential functional epitope residues.West Jr, Anthony P; Scharf, Louise; Horwitz, Joshua; Klein, Florian; Nussenzweig, Michel C; Bjorkman, Pamela JProceedings of the National Academy of Sciences of the United States of America2013 Jun 1023754383
Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome.Modi, Sheetal R; Lee, Henry H; Spina, Catherine S; Collins, James JNature2013 Jun 9NULL23748443
Large-scale brain networks in affective and social neuroscience: towards an integrative functional architecture of the brain.Barrett, Lisa Feldman; Satpute, Ajay BhaskarCurrent opinion in neurobiology2013 Jun361-7223352202
TALEN-based Gene Correction for Epidermolysis Bullosa.Osborn, Mark J; Starker, Colby G; McElroy, Amber N; Webber, Beau R; Riddle, Megan J; Xia, Lily; Defeo, Anthony P; Gabriel, Richard; Schmidt, Manfred; Von Kalle, Christof; Carlson, Daniel F; Maeder, Morgan L; Joung, J Keith; Wagner, John E; Voytas, Daniel Molecular therapy : the journal of the American Society of Gene Therapy2013 Jun1151-923546300
Design and validation of a real-time spiking-neural-network decoder for brain-machine interfaces.Dethier, Julie; Nuyujukian, Paul; Ryu, Stephen I; Shenoy, Krishna V; Boahen, KwabenaJournal of neural engineering2013 Jun03600823574919
Design and validation of a real-time spiking-neural-network decoder for brain-machine interfaces.Dethier, Julie; Nuyujukian, Paul; Ryu, Stephen I; Shenoy, Krishna V; Boahen, KwabenaJournal of neural engineering2013 Jun3600823574919
Neural evidence that human emotions share core affective properties.Wilson-Mendenhall, Christine D; Barrett, Lisa Feldman; Barsalou, Lawrence WPsychological science2013 Jun947-5623603916
Progress in gene therapy for neurological disorders.Simonato, Michele; Bennett, Jean; Boulis, Nicholas M; Castro, Maria G; Fink, David J; Goins, William F; Gray, Steven J; Lowenstein, Pedro R; Vandenberghe, Luk H; Wilson, Thomas J; Wolfe, John H; Glorioso, Joseph CNature reviews. Neurology2013 Jun29823670108
Activity-dependent gene expression in honey bee mushroom bodies in response to orientation flight.Lutz, Claudia C; Robinson, Gene EThe Journal of experimental biology2013 Jun 12031-823678099
Neural control of sexually dimorphic behaviors.Manoli, Devanand S; Fan, Pu; Fraser, Eleanor J; Shah, Nirao MCurrent opinion in neurobiology2013 Jun330-823680385
The NADPH metabolic network regulates human ýýB-crystallin cardiomyopathy and reductive stress in Drosophila melanogaster.Xie, Heng B; Cammarato, Anthony; Rajasekaran, Namakkal S; Zhang, Huali; Suggs, Jennifer A; Lin, Ho-Chen; Bernstein, Sanford I; Benjamin, Ivor J; Golic, Kent GPLoS genetics2013 June100354423818860
Mapping and cracking sensorimotor circuits in genetic model organisms.Clark, Damon A; Freifeld, Limor; Clandinin, Thomas RNeuron2013 May 22583-9523719159
Evolutionary dynamics and information hierarchies in biological systems.Walker, Sara Imari; Callahan, Benjamin J; Arya, Gaurav; Barry, J David; Bhattacharya, Tanmoy; Grigoryev, Sergei; Pellegrini, Matteo; Rippe, Karsten; Rosenberg, Susan MAnnals of the New York Academy of Sciences2013 May 2023691975
Comparative analysis of RNA sequencing methods for degraded or low-input samples.Adiconis, Xian; Borges-Rivera, Diego; Satija, Rahul; Deluca, David S; Busby, Michele A; Berlin, Aaron M; Sivachenko, Andrey; Thompson, Dawn Anne; Wysoker, Alec; Fennell, Timothy; Gnirke, Andreas; Pochet, Nathalie; Regev, Aviv; Levin, Joshua ZNature methods2013 May 1923685885
Fragment-based drug discovery using NMR spectroscopy.Harner, Mary J; Frank, Andreas O; Fesik, Stephen WJournal of biomolecular NMR2013 May 1823686385
An unsolved mystery: The target-recognizing RNA species of microRNA genes.Chen, Chang-ZhengBiochimie2013 May 1423685275
Statistical mechanics of Monod-Wyman-Changeux (MWC) models.Marzen, Sarah; Garcia, Hernan G; Phillips, RobJournal of molecular biology2013 May 131433-6023499654
Physiology: Inflammation links ageing to the brain.Gabuzda, Dana; Yankner, Bruce ANature2013 May 9197-823636321
One-step generation of mice carrying mutations in multiple genes by CRISPR/Cas-mediated genome engineering.Wang, Haoyi; Yang, Hui; Shivalila, Chikdu S; Dawlaty, Meelad M; Cheng, Albert W; Zhang, Feng; Jaenisch, RudolfCell2013 May 9910-823643243
Sexually dimorphic neurons in the ventromedial hypothalamus govern mating in both sexes and aggression in males.Yang, Cindy F; Chiang, Michael C; Gray, Daniel C; Prabhakaran, Mahalakshmi; Alvarado, Maricruz; Juntti, Scott A; Unger, Elizabeth K; Wells, James A; Shah, Nirao MCell2013 May 9896-90923663785
ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering.Gaj, Thomas; Gersbach, Charles A; Barbas 3rd, Carlos FTrends in biotechnology2013 May 823664777
The Glove-like Structure of the Conserved Membrane Protein TatC Provides Insight into Signal Sequence Recognition in Twin-Arginine Translocation.Ramasamy, Sureshkumar; Abrol, Ravinder; Suloway, Christian J M; Clemons Jr, William MStructure (London, England : 1993)2013 May 7777-8823583035
Endothelial barrier disruption and recovery is controlled by substrate stiffness.Birukova, Anna A; Tian, Xinyong; Cokic, Ivan; Beckham, Yvonne; Gardel, Margaret L; Birukov, Konstantin GMicrovascular research2013 May50-723296034
Single-molecule imaging of transcription factor binding to DNA in live mammalian cells.Gebhardt, J Christof M; Suter, David M; Roy, Rahul; Zhao, Ziqing W; Chapman, Alec R; Basu, Srinjan; Maniatis, Tom; Xie, X SunneyNature methods2013 May421-623524394
Regulation of immune responses and tolerance: the microRNA perspective.Chen, Chang-Zheng; Schaffert, Steven; Fragoso, Rita; Loh, ChristinaImmunological reviews2013 May112-2823550642
Progress in gene therapy for neurological disorders.Simonato, Michele; Bennett, Jean; Boulis, Nicholas M; Castro, Maria G; Fink, David J; Goins, William F; Gray, Steven J; Lowenstein, Pedro R; Vandenberghe, Luk H; Wilson, Thomas J; Wolfe, John H; Glorioso, Joseph CNature reviews. Neurology2013 May277-9123609618
Connection between Oligomeric State and Gating Characteristics of Mechanosensitive Ion Channels.Haselwandter, Christoph A; Phillips, RobPLoS computational biology2013 Maye100305523696720
Surpassing fundamental limits of oscillators using nonlinear resonators.Villanueva, L G; Kenig, E; Karabalin, R B; Matheny, M H; Lifshitz, Ron; Cross, M C; Roukes, M LPhysical review letters2013 Apr 2617720823679770
Induction of pathogenic TH17 cells by inducible salt-sensing kinase SGK1.Wu, Chuan; Yosef, Nir; Thalhamer, Theresa; Zhu, Chen; Xiao, Sheng; Kishi, Yasuhiro; Regev, Aviv; Kuchroo, Vijay KNature2013 Apr 25513-723467085
Dynamic regulatory network controlling TH17 cell differentiation.Yosef, Nir; Shalek, Alex K; Gaublomme, Jellert T; Jin, Hulin; Lee, Youjin; Awasthi, Amit; Wu, Chuan; Karwacz, Katarzyna; Xiao, Sheng; Jorgolli, Marsela; Gennert, David; Satija, Rahul; Shakya, Arvind; Lu, Diana Y; Trombetta, John J; Pillai, Meenu R; RatcliNature2013 Apr 25461-823467089
Altered social behavior and neuronal development in mice lacking the Uba6-Use1 ubiquitin transfer system.Lee, Peter C W; Dodart, Jean-Cosme; Aron, Liviu; Finley, Lydia W; Bronson, Roderick T; Haigis, Marcia C; Yankner, Bruce A; Harper, J WadeMolecular cell2013 Apr 25172-8423499007
TNF dually mediates resistance and susceptibility to mycobacteria via mitochondrial reactive oxygen species.Roca, Francisco J; Ramakrishnan, LalitaCell2013 Apr 25521-3423582643
Macrophage biology in development, homeostasis and disease.Wynn, Thomas A; Chawla, Ajay; Pollard, Jeffrey WNature2013 Apr 25445-5523619691
Generating Better Medicines for Cancer.Dunn, Stuart S; Byrne, James D; Perry, Jillian L; Chen, Kai; Desimone, Joseph MACS macro letters2013 Apr 24393-39723772351
Multifunctional three-dimensional macroporous nanoelectronic networks for smart materials.Liu, Jia; Xie, Chong; Dai, Xiaochuan; Jin, Lihua; Zhou, Wei; Lieber, Charles MProceedings of the National Academy of Sciences of the United States of America2013 Apr 236694-923569270
Functional inhibition of UQCRB suppresses angiogenesis in zebrafish.Cho, Yoon Sun; Jung, Hye Jin; Seok, Seung Hyeok; Payumo, Alexander Y; Chen, James K; Kwon, Ho JeongBiochemical and biophysical research communications2013 Apr 19396-40023454382
The immune system as a sensor of the metabolic state.Odegaard, Justin I; Chawla, AjayImmunity2013 Apr 18644-5423601683
Facile and stabile linkages through tyrosine: bioconjugation strategies with the tyrosine-click reaction.Ban, Hitoshi; Nagano, Masanobu; Gavrilyuk, Julia; Hakamata, Wataru; Inokuma, Tsubasa; Barbas 3rd, Carlos FBioconjugate chemistry2013 Apr 17520-3223534985
Higher frequency of genetic variants conferring increased risk for ADRs for commonly used drugs treating cancer, AIDS and tuberculosis in persons of African descent.Aminkeng, F; Ross, C J D; Rassekh, S R; Brunham, L R; Sistonen, J; Dube, M-P; Ibrahim, M; Nyambo, T B; Omar, S A; Froment, A; Bodo, J-M; Tishkoff, S; Carleton, B C; Hayden, M RThe pharmacogenomics journal2013 Apr 1623588107
Type 2 innate signals stimulate fibro/adipogenic progenitors to facilitate muscle regeneration.Heredia, Jose E; Mukundan, Lata; Chen, Francis M; Mueller, Alisa A; Deo, Rahul C; Locksley, Richard M; Rando, Thomas A; Chawla, AjayCell2013 Apr 11376-8823582327
Nonlinear mode-coupling in nanomechanical systems.Matheny, M H; Villanueva, L G; Karabalin, R B; Sader, J E; Roukes, M LNano letters2013 Apr 101622-623496001
Monitoring of post-translational modification dynamics with genetically encoded fluorescent reporters.Hertel, Fabian; Zhang, JinBiopolymers2013 Apr 10NULL23576192
Hunger-promoting hypothalamic neurons modulate effector and regulatory T-cell responses.Matarese, Giuseppe; Procaccini, Claudio; Menale, Ciro; Kim, Jae Geun; Kim, Jung Dae; Diano, Sabrina; Diano, Nadia; De Rosa, Veronica; Dietrich, Marcelo O; Horvath, Tamas LProceedings of the National Academy of Sciences of the United States of America2013 Apr 96193-823530205
A plasmon-assisted optofluidic (PAOF) system for measuring the photothermal conversion efficiencies of gold nanostructures and controlling an electrical switch.Zeng, Jie; Goldfeld, David; Xia, YounanAngewandte Chemie (International ed. in English)2013 Apr 84169-7323494970
The proteomic response to mutants of the Escherichia coli RNA degradosome.Zhou, Li; Zhang, Ang B; Wang, Rong; Marcotte, Edward M; Vogel, ChristineMolecular bioSystems2013 Apr 5750-723403814
How bacteria survive an acid trip.Hingorani, Karan S; Gierasch, Lila MProceedings of the National Academy of Sciences of the United States of America2013 Apr 25279-8023530238
Inferring evoked brain connectivity through adaptive perturbation.Lepage, Kyle Q; Ching, ShiNung; Kramer, Mark AJournal of computational neuroscience2013 Apr303-1822990598
Assessing the effects of pharmacological agents on respiratory dynamics using time-series modeling.Wong, Kin Foon Kevin; Gong, Jen J; Cotten, Joseph F; Solt, Ken; Brown, Emery NIEEE transactions on bio-medical engineering2013 Apr1118-2523193230
A comprehensive approach to zinc-finger recombinase customization enables genomic targeting in human cells.Gaj, Thomas; Mercer, Andrew C; Sirk, Shannon J; Smith, Heather L; Barbas 3rd, Carlos FNucleic acids research2013 Apr 13937-4623393187
Beyond transposons: the epigenetic and somatic functions of the Piwi-piRNA mechanism.Peng, Jamy C; Lin, HaifanCurrent opinion in cell biology2013 Apr190-423465540
Deciphering molecular circuits from genetic variation underlying transcriptional responsiveness to stimuli.Gat-Viks, Irit; Chevrier, Nicolas; Wilentzik, Roni; Eisenhaure, Thomas; Raychowdhury, Raktima; Steuerman, Yael; Shalek, Alex K; Hacohen, Nir; Amit, Ido; Regev, AvivNature biotechnology2013 Apr342-923503680
The fumagillin biosynthetic gene cluster in Aspergillus fumigatus encodes a cryptic terpene cyclase involved in the formation of ýý-trans-bergamotene.Lin, Hsiao-Ching; Chooi, Yit-Heng; Dhingra, Sourabh; Xu, Wei; Calvo, Ana M; Tang, YiJournal of the American Chemical Society2013 Mar 274616-923488861
Comparison study of gold nanohexapods, nanorods, and nanocages for photothermal cancer treatment.Wang, Yucai; Black, Kvar C L; Luehmann, Hannah; Li, Weiyang; Zhang, Yu; Cai, Xin; Wan, Dehui; Liu, Si-Yun; Li, Max; Kim, Paul; Li, Zhi-Yuan; Wang, Lihong V; Liu, Yongjian; Xia, YounanACS nano2013 Mar 262068-7723383982
Mammalian target of rapamycin complex 1 activation negatively regulates Polo-like kinase 2-mediated homeostatic compensation following neonatal seizures.Sun, Hongyu; Kosaras, Bela; Klein, Peter M; Jensen, Frances EProceedings of the National Academy of Sciences of the United States of America2013 Mar 265199-20423479645
Nanotools for neuroscience and brain activity mapping.Alivisatos, A Paul; Andrews, Anne M; Boyden, Edward S; Chun, Miyoung; Church, George M; Deisseroth, Karl; Donoghue, John P; Fraser, Scott E; Lippincott-Schwartz, Jennifer; Looger, Loren L; Masmanidis, Sotiris; McEuen, Paul L; Nurmikko, Arto V; Park, HongkACS nano2013 Mar 261850-6623514423
Molecular tools for chemical biotechnology.Galanie, Stephanie; Siddiqui, Michael S; Smolke, Christina DCurrent opinion in biotechnology2013 Mar 2223528237
Global analysis of phosphorylation networks in humans.Hu, Jianfei; Rho, Hee-Sool; Newman, Robert H; Hwang, Woochang; Neiswinger, John; Zhu, Heng; Zhang, Jin; Qian, JiangBiochimica et biophysica acta2013 Mar 2123524292
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Reductive stress linked to small HSPs, G6PD, and Nrf2 pathways in heart disease.Brewer, Alison C; Mustafi, Soumyajit Banerjee; Murray, Thomas V A; Rajasekaran, Namakkal Soorappan; Benjamin, Ivor JAntioxidants & redox signaling2013 Mar 201114-2722938199
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Electroencephalogram signatures of loss and recovery of consciousness from propofol.Purdon, Patrick L; Pierce, Eric T; Mukamel, Eran A; Prerau, Michael J; Walsh, John L; Wong, Kin Foon K; Salazar-Gomez, Andres F; Harrell, Priscilla G; Sampson, Aaron L; Cimenser, Aylin; Ching, ShiNung; Kopell, Nancy J; Tavares-Stoeckel, Casie; Habeeb, KatProceedings of the National Academy of Sciences of the United States of America2013 Mar 19E1142-5123487781
Proteomic mapping of mitochondria in living cells via spatially restricted enzymatic tagging.Rhee, Hyun-Woo; Zou, Peng; Udeshi, Namrata D; Martell, Jeffrey D; Mootha, Vamsi K; Carr, Steven A; Ting, Alice YScience (New York, N.Y.)2013 Mar 151328-3123371551
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Investigation of neovascularization in three-dimensional porous scaffolds in vivo by a combination of multiscale photoacoustic microscopy and optical coherence tomography.Cai, Xin; Zhang, Yu; Li, Li; Choi, Sung-Wook; MacEwan, Matthew R; Yao, Junjie; Kim, Chulhong; Xia, Younan; Wang, Lihong VTissue engineering. Part C, Methods2013 Mar196-20422838500
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Multiplexed visualization of dynamic signaling networks using genetically encoded fluorescent protein-based biosensors.Depry, Charlene; Mehta, Sohum; Zhang, JinPflugers Archiv : European journal of physiology2013 Mar373-8123138230
Transcriptional reprogramming of mature CD4ýýý helper T cells generates distinct MHC class II-restricted cytotoxic T lymphocytes.Mucida, Daniel; Husain, Mohammad Mushtaq; Muroi, Sawako; van Wijk, Femke; Shinnakasu, Ryo; Naoe, Yoshinori; Reis, Bernardo Sgarbi; Huang, Yujun; Lambolez, Florence; Docherty, Michael; Attinger, Antoine; Shui, Jr-Wen; Kim, Gisen; Lena, Christopher J; SakagNature immunology2013 Mar281-923334788
Efficient genome editing in zebrafish using a CRISPR-Cas system.Hwang, Woong Y; Fu, Yanfang; Reyon, Deepak; Maeder, Morgan L; Tsai, Shengdar Q; Sander, Jeffry D; Peterson, Randall T; Yeh, J-R Joanna; Joung, J KeithNature biotechnology2013 Mar227-923360964
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Identification of nonvisual photomotor response cells in the vertebrate hindbrain.Kokel, David; Dunn, Timothy W; Ahrens, Misha B; Alshut, Rudiger; Cheung, Chung Yan J; Saint-Amant, Louis; Bruni, Giancarlo; Mateus, Rita; van Ham, Tjakko J; Shiraki, Tomoya; Fukada, Yoshitaka; Kojima, Daisuke; Yeh, Jing-Ruey J; Mikut, Ralf; von Lintig, JoThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Feb 273834-4323447595
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The NeST long ncRNA controls microbial susceptibility and epigenetic activation of the interferon-ýý locus.Gomez, J Antonio; Wapinski, Orly L; Yang, Yul W; Bureau, Jean-Francois; Gopinath, Smita; Monack, Denise M; Chang, Howard Y; Brahic, Michel; Kirkegaard, KarlaCell2013 Feb 14743-5423415224
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Engineering a BCR-ABL-activated caspase for the selective elimination of leukemic cells.Kurokawa, Manabu; Ito, Takahiro; Yang, Chih-Sheng; Zhao, Chen; Macintyre, Andrew N; Rizzieri, David A; Rathmell, Jeffrey C; Deininger, Michael W; Reya, Tannishtha; Kornbluth, SallyProceedings of the National Academy of Sciences of the United States of America2013 Feb 52300-523324740
Preclinical evaluation of HIV eradication strategies in the simian immunodeficiency virus-infected rhesus macaque: a pilot study testing inhibition of indoleamine 2,3-dioxygenase.Dunham, Richard M; Gordon, Shari N; Vaccari, Monica; Piatak, Michael; Huang, Yong; Deeks, Steven G; Lifson, Jeffrey; Franchini, Genoveffa; McCune, Joseph MAIDS research and human retroviruses2013 Feb207-1422924680
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Discovery of potent myeloid cell leukemia 1 (Mcl-1) inhibitors using fragment-based methods and structure-based design.Friberg, Anders; Vigil, Dominico; Zhao, Bin; Daniels, R Nathan; Burke, Jason P; Garcia-Barrantes, Pedro M; Camper, DeMarco; Chauder, Brian A; Lee, Taekyu; Olejniczak, Edward T; Fesik, Stephen WJournal of medicinal chemistry2013 Jan 1015-3023244564
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Homo-dimerization and ligand binding by the leucine-rich repeat domain at RHG1/RFS2 underlying resistance to two soybean pathogens.Afzal, Ahmed J; Srour, Ali; Goil, Abhishek; Vasudaven, Sheeja; Liu, Tianyun; Samudrala, Ram; Dogra, Navneet; Kohli, Punit; Malakar, Ayan; Lightfoot, David ABMC plant biology20134323497186
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A chemically programmed antibody is a long-lasting and potent inhibitor of influenza neuraminidase.Hayakawa, Masahiko; Toda, Narihiro; Carrillo, Nancy; Thornburg, Natalie J; Crowe Jr, James E; Barbas 3rd, Carlos FChembiochem : a European journal of chemical biology2012 Oct 152191-522965667
Identification and characterization of the echinocandin B biosynthetic gene cluster from Emericella rugulosa NRRL 11440.Cacho, Ralph A; Jiang, Wei; Chooi, Yit-Heng; Walsh, Christopher T; Tang, YiJournal of the American Chemical Society2012 Oct 1016781-9022998630
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A real-time automated point-process method for the detection and correction of erroneous and ectopic heartbeats.Citi, Luca; Brown, Emery N; Barbieri, RiccardoIEEE transactions on bio-medical engineering2012 Oct2828-3722875239
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Engineering designer transcription activator-like effector nucleases (TALENs) by REAL or REAL-Fast assembly.Reyon, Deepak; Khayter, Cyd; Regan, Maureen R; Joung, J Keith; Sander, Jeffry DCurrent protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.]2012 OctUnit 12.1523026907
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Highly efficient generation of heritable zebrafish gene mutations using homo- and heterodimeric TALENs.Cade, Lindsay; Reyon, Deepak; Hwang, Woong Y; Tsai, Shengdar Q; Patel, Samir; Khayter, Cyd; Joung, J Keith; Sander, Jeffry D; Peterson, Randall T; Yeh, Jing-Ruey JoannaNucleic acids research2012 Sep8001-1022684503
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Limitations in anti-obesity drug development: the critical role of hunger-promoting neurons.Dietrich, Marcelo O; Horvath, Tamas LNature reviews. Drug discovery2012 Sep675-9122858652
Strategic protein target analysis for developing drugs to stop dental caries.Horst, J A; Pieper, U; Sali, A; Zhan, L; Chopra, G; Samudrala, R; Featherstone, J D BAdvances in dental research2012 Sep86-9322899687
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A census of human soluble protein complexes.Havugimana, Pierre C; Hart, G Traver; Nepusz, Tamas; Yang, Haixuan; Turinsky, Andrei L; Li, Zhihua; Wang, Peggy I; Boutz, Daniel R; Fong, Vincent; Phanse, Sadhna; Babu, Mohan; Craig, Stephanie A; Hu, Pingzhao; Wan, Cuihong; Vlasblom, James; Dar, Vaqaar-unCell2012 Aug 311068-8122939629
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An in vivo platform for rapid high-throughput antitubercular drug discovery.Takaki, Kevin; Cosma, Christine L; Troll, Mark A; Ramakrishnan, LalitaCell reports2012 Jul 26175-8422840407
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Pretreatment of Asian elephant (Elephas maximus) spermatozoa with cholesterol-loaded cyclodextrins and glycerol addition at 4ýýC improves cryosurvival.Kiso, Wendy K; Asano, Atsushi; Travis, Alexander J; Schmitt, Dennis L; Brown, Janine L; Pukazhenthi, Budhan SReproduction, fertility, and development20121134-4222954260
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Determining host metabolic limitations on viral replication via integrated modeling and experimental perturbation.Birch, Elsa W; Ruggero, Nicholas A; Covert, Markus WPLoS computational biology2012e100274623093930
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Therapeutic helminth infection of macaques with idiopathic chronic diarrhea alters the inflammatory signature and mucosal microbiota of the colon.Broadhurst, Mara Jana; Ardeshir, Amir; Kanwar, Bittoo; Mirpuri, Julie; Gundra, Uma Mahesh; Leung, Jacqueline M; Wiens, Kirsten E; Vujkovic-Cvijin, Ivan; Kim, Charlie C; Yarovinsky, Felix; Lerche, Nicholas W; McCune, Joseph M; Loke, P'ngPLoS pathogens2012e100300023166490
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In vivo quantitative evaluation of the transport kinetics of gold nanocages in a lymphatic system by noninvasive photoacoustic tomography.Cai, Xin; Li, Weiyang; Kim, Chul-Hong; Yuan, Yuchen; Wang, Lihong V; Xia, YounanACS nano2011 Dec 279658-6722054348
Combinatorial patterning of chromatin regulators uncovered by genome-wide location analysis in human cells.Ram, Oren; Goren, Alon; Amit, Ido; Shoresh, Noam; Yosef, Nir; Ernst, Jason; Kellis, Manolis; Gymrek, Melissa; Issner, Robbyn; Coyne, Michael; Durham, Timothy; Zhang, Xiaolan; Donaghey, Julie; Epstein, Charles B; Regev, Aviv; Bernstein, Bradley ECell2011 Dec 231628-3922196736
Sustained axon regeneration induced by co-deletion of PTEN and SOCS3.Sun, Fang; Park, Kevin K; Belin, Stephane; Wang, Dongqing; Lu, Tao; Chen, Gang; Zhang, Kang; Yeung, Cecil; Feng, Guoping; Yankner, Bruce A; He, ZhigangNature2011 Dec 15372-522056987
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Genomic rearrangement in three dimensions.Hastings, P J; Rosenberg, Susan MNature biotechnology2011 Dec1096-822158363
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The Caenorhabditis elegans synthetic multivulva genes prevent ras pathway activation by tightly repressing global ectopic expression of lin-3 EGF.Saffer, Adam M; Kim, Dong Hyun; van Oudenaarden, Alexander; Horvitz, H RobertPLoS genetics2011 Dece100241822242000
Semiconductor nanowires: A platform for nanoscience and nanotechnology.Lieber, Charles MMRS bulletin / Materials Research Society2011 Dec 11052-106322707850
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Multiplexed quantification of nucleic acids with large dynamic range using multivolume digital RT-PCR on a rotational SlipChip tested with HIV and hepatitis C viral load.Shen, Feng; Sun, Bing; Kreutz, Jason E; Davydova, Elena K; Du, Wenbin; Reddy, Poluru L; Joseph, Loren J; Ismagilov, Rustem FJournal of the American Chemical Society2011 Nov 917705-1221995644
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In situ genetic correction of the sickle cell anemia mutation in human induced pluripotent stem cells using engineered zinc finger nucleases.Sebastiano, Vittorio; Maeder, Morgan L; Angstman, James F; Haddad, Bahareh; Khayter, Cyd; Yeo, Dana T; Goodwin, Mathew J; Hawkins, John S; Ramirez, Cherie L; Batista, Luis F Z; Artandi, Steven E; Wernig, Marius; Joung, J KeithStem cells (Dayton, Ohio)2011 Nov1717-2621898685
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Exploring weak, transient protein--protein interactions in crowded in vivo environments by in-cell nuclear magnetic resonance spectroscopy.Wang, Qinghua; Zhuravleva, Anastasia; Gierasch, Lila MBiochemistry2011 Nov 19225-3621942871
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Gold nanocages: from synthesis to theranostic applications.Xia, Younan; Li, Weiyang; Cobley, Claire M; Chen, Jingyi; Xia, Xiaohu; Zhang, Qiang; Yang, Miaoxin; Cho, Eun Chul; Brown, Paige KAccounts of chemical research2011 Oct 18914-2421528889
Benign rolandic epileptiform discharges are associated with mood and behavior problems.Sarco, Dean P; Boyer, Katrina; Lundy-Krigbaum, Shannon M; Takeoka, Masanori; Jensen, Frances; Gregas, Matt; Waber, Deborah PEpilepsy & behavior : E&B2011 Oct298-30321862414
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Revealing off-target cleavage specificities of zinc-finger nucleases by in vitro selection.Pattanayak, Vikram; Ramirez, Cherie L; Joung, J Keith; Liu, David RNature methods2011 Sep765-7021822273
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Peroxisome proliferation-associated control of reactive oxygen species sets melanocortin tone and feeding in diet-induced obesity.Diano, Sabrina; Liu, Zhong-Wu; Jeong, Jin Kwon; Dietrich, Marcelo O; Ruan, Hai-Bin; Kim, Esther; Suyama, Shigetomo; Kelly, Kaitlin; Gyengesi, Erika; Arbiser, Jack L; Belsham, Denise D; Sarruf, David A; Schwartz, Michael W; Bennett, Anton M; Shanabrough, MNature medicine2011 Sep1121-721873987
The toxin and antidote puzzle: new ways to control insect pest populations through manipulating inheritance.Marshall, John MBioengineered bugs2011 Sep-Oct235-4021876382
Gold nanocages as contrast agents for photoacoustic imaging.Li, Weiyang; Brown, Paige K; Wang, Lihong V; Xia, YounanContrast media & molecular imaging2011 Sep-Oct370-722025337
A Three-Channel Spectrometer for Wide-Field Imaging of Anisotropic Plasmonic Nanoparticles.Sweeney, Christina M; Nehl, Colleen L; Hasan, Warefta; Liang, Taiyang; Eckermann, Amanda; Meade, Thomas J; Odom, Teri WThe journal of physical chemistry. C, Nanomaterials and interfaces2011 Aug 1815933-1593721927639
In situ structural characterization of a recombinant protein in native Escherichia coli membranes with solid-state magic-angle-spinning NMR.Fu, Riqiang; Wang, Xingsheng; Li, Conggang; Santiago-Miranda, Adriana N; Pielak, Gary J; Tian, FangJournal of the American Chemical Society2011 Aug 1712370-321774553
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Probing individual environmental bacteria for viruses by using microfluidic digital PCR.Tadmor, Arbel D; Ottesen, Elizabeth A; Leadbetter, Jared R; Phillips, RobScience (New York, N.Y.)2011 Jul 158-6221719670
What You Feel Influences What You See: The Role of Affective Feelings in Resolving Binocular Rivalry.Anderson, Eric; Siegel, Erika H; Barrett, Lisa FeldmanJournal of experimental social psychology2011 Jul856-86021789027
The effect of mutations on the alloreactive T cell receptor/peptide-MHC interface structure: a molecular dynamics study.Wolfson, Mikhail Y; Nam, Kwangho; Chakraborty, Arup KThe journal of physical chemistry. B2011 Jun 308317-2721651302
Defining the computational structure of the motion detector in Drosophila.Clark, Damon A; Bursztyn, Limor; Horowitz, Mark A; Schnitzer, Mark J; Clandinin, Thomas RNeuron2011 Jun 231165-7721689602
The visual impact of gossip.Anderson, Eric; Siegel, Erika H; Bliss-Moreau, Eliza; Barrett, Lisa FeldmanScience (New York, N.Y.)2011 Jun 171446-821596956
A hierarchical Bayesian approach for learning sparse spatio-temporal decompositions of multichannel EEG.Wu, Wei; Chen, Zhe; Gao, Shangkai; Brown, Emery NNeuroImage2011 Jun 151929-4521420499
Involvement of adenosine A2A receptors in engulfment-dependent apoptotic cell suppression of inflammation.Koroskenyi, Krisztina; Duro, Edina; Pallai, Anna; Sarang, Zsolt; Kloor, Doris; Ucker, David S; Beceiro, Susana; Castrillo, Antonio; Chawla, Ajay; Ledent, Catherine A; Fesus, Laszlo; Szondy, ZsuzsaJournal of immunology (Baltimore, Md. : 1950)2011 Jun 157144-5521593381
Breaking free of sample size dogma to perform innovative translational research.Bacchetti, Peter; Deeks, Steven G; McCune, Joseph MScience translational medicine2011 Jun 1587ps2421677197
Nicotine decreases food intake through activation of POMC neurons.Mineur, Yann S; Abizaid, Alfonso; Rao, Yan; Salas, Ramiro; DiLeone, Ralph J; Gundisch, Daniela; Diano, Sabrina; De Biasi, Mariella; Horvath, Tamas L; Gao, Xiao-Bing; Picciotto, Marina RScience (New York, N.Y.)2011 Jun 101330-221659607
The human brain in a dish: the promise of iPSC-derived neurons.Dolmetsch, Ricardo; Geschwind, Daniel HCell2011 Jun 10831-421663789
Effects of natural selection and gene conversion on the evolution of human glycophorins coding for MNS blood polymorphisms in malaria-endemic African populations.Ko, Wen-Ya; Kaercher, Kristin A; Giombini, Emanuela; Marcatili, Paolo; Froment, Alain; Ibrahim, Muntaser; Lema, Godfrey; Nyambo, Thomas B; Omar, Sabah A; Wambebe, Charles; Ranciaro, Alessia; Hirbo, Jibril B; Tishkoff, Sarah AAmerican journal of human genetics2011 Jun 10741-5421664997
Controlling the synthesis and assembly of silver nanostructures for plasmonic applications.Rycenga, Matthew; Cobley, Claire M; Zeng, Jie; Li, Weiyang; Moran, Christine H; Zhang, Qiang; Qin, Dong; Xia, YounanChemical reviews2011 Jun 83669-71221395318
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Generation of hot spots with silver nanocubes for single-molecule detection by surface-enhanced Raman scattering.Rycenga, Matthew; Xia, Xiaohu; Moran, Christine H; Zhou, Fei; Qin, Dong; Li, Zhi-Yuan; Xia, YounanAngewandte Chemie (International ed. in English)2011 Jun 65473-721542081
Age of diagnosis for autism: individual and community factors across 10 birth cohorts.Fountain, Christine; King, Marissa D; Bearman, Peter SJournal of epidemiology and community health2011 Jun503-1020974836
A point process model for auditory neurons considering both their intrinsic dynamics and the spectrotemporal properties of an extrinsic signal.Plourde, Eric; Delgutte, Bertrand; Brown, Emery NIEEE transactions on bio-medical engineering2011 Jun1507-1021317068
Neuropeptide Y-like signalling and nutritionally mediated gene expression and behaviour in the honey bee.Ament, S A; Velarde, R A; Kolodkin, M H; Moyse, D; Robinson, G EInsect molecular biology2011 Jun335-4521349120
Targeted mutagenesis of duplicated genes in soybean with zinc-finger nucleases.Curtin, Shaun J; Zhang, Feng; Sander, Jeffry D; Haun, William J; Starker, Colby; Baltes, Nicholas J; Reyon, Deepak; Dahlborg, Elizabeth J; Goodwin, Mathew J; Coffman, Andrew P; Dobbs, Drena; Joung, J Keith; Voytas, Daniel F; Stupar, Robert MPlant physiology2011 Jun466-7321464476
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Photon counting, censor corrections, and lifetime imaging for improved detection in two-photon microscopy.Driscoll, Jonathan D; Shih, Andy Y; Iyengar, Satish; Field, Jeffrey J; White, G Allen; Squier, Jeffrey A; Cauwenberghs, Gert; Kleinfeld, DavidJournal of neurophysiology2011 Jun3106-1321471395
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Risk as Social Context: Immigration Policy and Autism in California.Fountain, Christine; Bearman, PeterSociological forum (Randolph, N.J.)2011 Jun 1215-24021643443
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Prolonged oxaliplatin exposure alters intracellular calcium signaling: a new mechanism to explain oxaliplatin-associated peripheral neuropathy.Schulze, Christin; McGowan, Margit; Jordt, Sven-Eric; Ehrlich, Barbara EClinical colorectal cancer2011 Jun126-3321859566
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Measurement of absolute T cell receptor rearrangement diversity.Baum, Paul D; Young, Jennifer J; McCune, Joseph MJournal of immunological methods2011 May 3145-5321385585
Tracking brain states under general anesthesia by using global coherence analysis.Cimenser, Aylin; Purdon, Patrick L; Pierce, Eric T; Walsh, John L; Salazar-Gomez, Andres F; Harrell, Priscilla G; Tavares-Stoeckel, Casie; Habeeb, Kathleen; Brown, Emery NProceedings of the National Academy of Sciences of the United States of America2011 May 248832-721555565
Comparative functional genomics of the fission yeasts.Rhind, Nicholas; Chen, Zehua; Yassour, Moran; Thompson, Dawn A; Haas, Brian J; Habib, Naomi; Wapinski, Ilan; Roy, Sushmita; Lin, Michael F; Heiman, David I; Young, Sarah K; Furuya, Kanji; Guo, Yabin; Pidoux, Alison; Chen, Huei Mei; Robbertse, Barbara; GolScience (New York, N.Y.)2011 May 20930-621511999
Fluctuating and sensory-induced vasodynamics in rodent cortex extend arteriole capacity.Drew, Patrick J; Shih, Andy Y; Kleinfeld, DavidProceedings of the National Academy of Sciences of the United States of America2011 May 178473-821536897
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Metabolite-enabled eradication of bacterial persisters by aminoglycosides.Allison, Kyle R; Brynildsen, Mark P; Collins, James JNature2011 May 12216-2021562562
Genetically encodable fluorescent biosensors for tracking signaling dynamics in living cells.Newman, Robert H; Fosbrink, Matthew D; Zhang, JinChemical reviews2011 May 113614-6621456512
Differential hemodynamic response in affective circuitry with aging: an FMRI study of novelty, valence, and arousal.Moriguchi, Yoshiya; Negreira, Alyson; Weierich, Mariann; Dautoff, Rebecca; Dickerson, Bradford C; Wright, Christopher I; Barrett, Lisa FeldmanJournal of cognitive neuroscience2011 May1027-4120521849
Emotional granularity and borderline personality disorder.Suvak, Michael K; Litz, Brett T; Sloan, Denise M; Zanarini, Mary C; Barrett, Lisa Feldman; Hofmann, Stefan GJournal of abnormal psychology2011 May414-2621171723
Space coding by gamma oscillations in the barn owl optic tectum.Sridharan, Devarajan; Boahen, Kwabena; Knudsen, Eric IJournal of neurophysiology2011 May2005-1721325681
Single-neuron dynamics in human focal epilepsy.Truccolo, Wilson; Donoghue, Jacob A; Hochberg, Leigh R; Eskandar, Emad N; Madsen, Joseph R; Anderson, William S; Brown, Emery N; Halgren, Eric; Cash, Sydney SNature neuroscience2011 May635-4121441925
PAPI, a novel TUDOR-domain protein, complexes with AGO3, ME31B and TRAL in the nuage to silence transposition.Liu, Li; Qi, Hongying; Wang, Jianquan; Lin, HaifanDevelopment (Cambridge, England)2011 May1863-7321447556
MicroRNA programs in normal and aberrant stem and progenitor cells.Arnold, Christopher P; Tan, Ruoying; Zhou, Baiyu; Yue, Si-Biao; Schaffert, Steven; Biggs, Joseph R; Doyonnas, Regis; Lo, Miao-Chia; Perry, John M; Renault, Valerie M; Sacco, Alessandra; Somervaille, Tim; Viatour, Patrick; Brunet, Anne; Cleary, Michael L; Genome research2011 May798-81021451113
Digital isothermal quantification of nucleic acids via simultaneous chemical initiation of recombinase polymerase amplification reactions on SlipChip.Shen, Feng; Davydova, Elena K; Du, Wenbin; Kreutz, Jason E; Piepenburg, Olaf; Ismagilov, Rustem FAnalytical chemistry2011 May 13533-4021476587
Genes methylated by DNA methyltransferase 3b are similar in mouse intestine and human colon cancer.Steine, Eveline J; Ehrich, Mathias; Bell, George W; Raj, Arjun; Reddy, Seshamma; van Oudenaarden, Alexander; Jaenisch, Rudolf; Linhart, Heinz GThe Journal of clinical investigation2011 May1748-5221490393
Inverse Medea as a novel gene drive system for local population replacement: a theoretical analysis.Marshall, John M; Hay, Bruce AThe Journal of heredity2011 May-Jun336-4121493596
Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells.Rabani, Michal; Levin, Joshua Z; Fan, Lin; Adiconis, Xian; Raychowdhury, Raktima; Garber, Manuel; Gnirke, Andreas; Nusbaum, Chad; Hacohen, Nir; Friedman, Nir; Amit, Ido; Regev, AvivNature biotechnology2011 May436-4221516085
Insulin-like growth factor 1-mediated hyperthermia involves anterior hypothalamic insulin receptors.Sanchez-Alavez, Manuel; Osborn, Olivia; Tabarean, Iustin V; Holmberg, Kristina H; Eberwine, James; Kahn, C Ronald; Bartfai, TamasThe Journal of biological chemistry2011 Apr 2914983-9021330367
Luminescent kinase activity biosensors based on a versatile bimolecular switch.Herbst, Katie J; Allen, Michael D; Zhang, JinJournal of the American Chemical Society2011 Apr 205676-921438554
Dynamic and structural signatures of lamellar actomyosin force generation.Aratyn-Schaus, Yvonne; Oakes, Patrick W; Gardel, Margaret LMolecular biology of the cell2011 Apr 151330-921307339
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Hepatic gene expression profiling of 5'-AMP-induced hypometabolism in mice.Zhao, Zhaoyang; Miki, Takao; Van Oort-Jansen, Anita; Matsumoto, Tomoko; Loose, David S; Lee, Cheng ChiPhysiological genomics2011 Apr 12325-4521224422
Eosinophils sustain adipose alternatively activated macrophages associated with glucose homeostasis.Wu, Davina; Molofsky, Ari B; Liang, Hong-Erh; Ricardo-Gonzalez, Roberto R; Jouihan, Hani A; Bando, Jennifer K; Chawla, Ajay; Locksley, Richard MScience (New York, N.Y.)2011 Apr 8243-721436399
A new theranostic system based on gold nanocages and phase-change materials with unique features for photoacoustic imaging and controlled release.Moon, Geon Dae; Choi, Sung-Wook; Cai, Xin; Li, Weiyang; Cho, Eun Chul; Jeong, Unyong; Wang, Lihong V; Xia, YounanJournal of the American Chemical Society2011 Apr 64762-521401092
Older and wiser? An affective science perspective on age-related challenges in financial decision making.Weierich, Mariann R; Kensinger, Elizabeth A; Munnell, Alicia H; Sass, Steven A; Dickerson, Brad C; Wright, Christopher I; Barrett, Lisa FeldmanSocial cognitive and affective neuroscience2011 Apr195-20620587596
Statistical inference for assessing functional connectivity of neuronal ensembles with sparse spiking data.Chen, Zhe; Putrino, David F; Ghosh, Soumya; Barbieri, Riccardo; Brown, Emery NIEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society2011 Apr121-3520937583
A closed-loop human simulator for investigating the role of feedback control in brain-machine interfaces.Cunningham, John P; Nuyujukian, Paul; Gilja, Vikash; Chestek, Cindy A; Ryu, Stephen I; Shenoy, Krishna VJournal of neurophysiology2011 Apr1932-4920943945
Medea selfish genetic elements as tools for altering traits of wild populations: a theoretical analysis.Ward, Catherine M; Su, Jessica T; Huang, Yunxin; Lloyd, Alun L; Gould, Fred; Hay, Bruce AEvolution; international journal of organic evolution2011 Apr1149-6221062278
Design, construction, and validation of a modular library of sequence diversity standards for polymerase chain reaction.Baum, Paul D; Young, Jennifer J; Zhang, Qianjun; Kasakow, Zeljka; McCune, Joseph MAnalytical biochemistry2011 Apr 1106-1521111699
Grounding emotion in situated conceptualization.Wilson-Mendenhall, Christine D; Barrett, Lisa Feldman; Simmons, W Kyle; Barsalou, Lawrence WNeuropsychologia2011 Apr1105-2721192959
Gold nanocages covered with thermally-responsive polymers for controlled release by high-intensity focused ultrasound.Li, Weiyang; Cai, Xin; Kim, Chulhong; Sun, Guorong; Zhang, Yu; Deng, Rui; Yang, Miaoxin; Chen, Jingyi; Achilefu, Samuel; Wang, Lihong V; Xia, YounanNanoscale2011 Apr1724-3021321760
Development of later life spontaneous seizures in a rodent model of hypoxia-induced neonatal seizures.Rakhade, Sanjay N; Klein, Peter M; Huynh, Thanthao; Hilario-Gomez, Cristina; Kosaras, Bela; Rotenberg, Alexander; Jensen, Frances EEpilepsia2011 Apr753-6521366558
Drug tolerance in replicating mycobacteria mediated by a macrophage-induced efflux mechanism.Adams, Kristin N; Takaki, Kevin; Connolly, Lynn E; Wiedenhoft, Heather; Winglee, Kathryn; Humbert, Olivier; Edelstein, Paul H; Cosma, Christine L; Ramakrishnan, LalitaCell2011 Apr 139-5321376383
A miniaturized technique for assessing protein thermodynamics and function using fast determination of quantitative cysteine reactivity.Isom, Daniel G; Marguet, Philippe R; Oas, Terrence G; Hellinga, Homme WProteins2011 Apr1034-4721387407
A randomized, controlled trial of raltegravir intensification in antiretroviral-treated, HIV-infected patients with a suboptimal CD4+ T cell response.Hatano, Hiroyu; Hayes, Timothy L; Dahl, Viktor; Sinclair, Elizabeth; Lee, Tzong-Hae; Hoh, Rebecca; Lampiris, Harry; Hunt, Peter W; Palmer, Sarah; McCune, Joseph M; Martin, Jeffrey N; Busch, Michael P; Shacklett, Barbara L; Deeks, Steven GThe Journal of infectious diseases2011 Apr 1960-821402547
Comparative advantages of mechanical biosensors.Arlett, J L; Myers, E B; Roukes, M LNature nanotechnology2011 Apr203-1521441911
Validating transcripts with probes and imaging technology.Itzkovitz, Shalev; van Oudenaarden, AlexanderNature methods2011 AprS12-921451512
Socioeconomic Status and the Increased Prevalence of Autism in California.King, Marissa D; Bearman, Peter SAmerican sociological review2011 Apr 1320-34621547238
Trpv1 reporter mice reveal highly restricted brain distribution and functional expression in arteriolar smooth muscle cells.Cavanaugh, Daniel J; Chesler, Alexander T; Jackson, Alexander C; Sigal, Yaron M; Yamanaka, Hiroki; Grant, Rebecca; O'Donnell, Dajan; Nicoll, Roger A; Shah, Nirao M; Julius, David; Basbaum, Allan IThe Journal of neuroscience : the official journal of the Society for Neuroscience2011 Mar 305067-7721451044
Evidence from Cameroon reveals differences in the genetic structure and histories of chimpanzee populations.Gonder, Mary Katherine; Locatelli, Sabrina; Ghobrial, Lora; Mitchell, Matthew W; Kujawski, Joseph T; Lankester, Felix J; Stewart, Caro-Beth; Tishkoff, Sarah AProceedings of the National Academy of Sciences of the United States of America2011 Mar 224766-7121368170
Cell-ECM traction force modulates endogenous tension at cell-cell contacts.Maruthamuthu, Venkat; Sabass, Benedikt; Schwarz, Ulrich S; Gardel, Margaret LProceedings of the National Academy of Sciences of the United States of America2011 Mar 224708-1321383129
Impulse control: temporal dynamics in gene transcription.Yosef, Nir; Regev, AvivCell2011 Mar 18886-9621414481
Cellular decision making and biological noise: from microbes to mammals.Balazsi, Gabor; van Oudenaarden, Alexander; Collins, James JCell2011 Mar 18910-2521414483
Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity.Willner, Dana; Furlan, Mike; Schmieder, Robert; Grasis, Juris A; Pride, David T; Relman, David A; Angly, Florent E; McDole, Tracey; Mariella Jr, Ray P; Rohwer, Forest; Haynes, MatthewProceedings of the National Academy of Sciences of the United States of America2011 Mar 154547-5320547834
Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation.Dethlefsen, Les; Relman, David AProceedings of the National Academy of Sciences of the United States of America2011 Mar 154554-6120847294
Sustained activation of nuclear erythroid 2-related factor 2/antioxidant response element signaling promotes reductive stress in the human mutant protein aggregation cardiomyopathy in mice.Rajasekaran, Namakkal Soorappan; Varadharaj, Saradhadevi; Khanderao, Gayatri D; Davidson, Christopher J; Kannan, Sankaranarayanan; Firpo, Matthew A; Zweier, Jay L; Benjamin, Ivor JAntioxidants & redox signaling2011 Mar 15957-7121126175
Using induced pluripotent stem cells to investigate cardiac phenotypes in Timothy syndrome.Yazawa, Masayuki; Hsueh, Brian; Jia, Xiaolin; Pasca, Anca M; Bernstein, Jonathan A; Hallmayer, Joachim; Dolmetsch, Ricardo ENature2011 Mar 10230-421307850
Cytoplasmic intron sequence-retaining transcripts can be dendritically targeted via ID element retrotransposons.Buckley, Peter T; Lee, Miler T; Sul, Jai-Yoon; Miyashiro, Kevin Y; Bell, Thomas J; Fisher, Stephen A; Kim, Junhyong; Eberwine, JamesNeuron2011 Mar 10877-8421382548
Dodging drug-resistant cancer with diamonds.Merkel, Timothy J; DeSimone, Joseph MScience translational medicine2011 Mar 973ps821389261
Caenorhabditis elegans aristaless/Arx gene alr-1 restricts variable gene expression.Topalidou, Irini; van Oudenaarden, Alexander; Chalfie, MartinProceedings of the National Academy of Sciences of the United States of America2011 Mar 84063-821368126
In vivo imaging of myelin in the vertebrate central nervous system using third harmonic generation microscopy.Farrar, Matthew J; Wise, Frank W; Fetcho, Joseph R; Schaffer, Chris BBiophysical journal2011 Mar 21362-7121354410
An enzyme-sensitive probe for photoacoustic imaging and fluorescence detection of protease activity.Xia, Xiaohu; Yang, Miaoxin; Oetjen, L Kyle; Zhang, Yu; Li, Qingge; Chen, Jingyi; Xia, YounanNanoscale2011 Mar950-321225037
HIV-specific CD4+ T cells may contribute to viral persistence in HIV controllers.Hunt, Peter W; Hatano, Hiroyu; Sinclair, Elizabeth; Lee, Tzong-Hae; Busch, Michael P; Martin, Jeffrey N; McCune, Joseph M; Deeks, Steven GClinical infectious diseases : an official publication of the Infectious Diseases Society of America2011 Mar 1681-721245154
An optogenetic toolbox designed for primates.Diester, Ilka; Kaufman, Matthew T; Mogri, Murtaza; Pashaie, Ramin; Goo, Werapong; Yizhar, Ofer; Ramakrishnan, Charu; Deisseroth, Karl; Shenoy, Krishna VNature neuroscience2011 Mar387-9721278729
High-throughput single-molecule optofluidic analysis.Kim, Soohong; Streets, Aaron M; Lin, Ron R; Quake, Stephen R; Weiss, Shimon; Majumdar, Devdoot SNature methods2011 Mar242-521297618
Effect of promoter architecture on the cell-to-cell variability in gene expression.Sanchez, Alvaro; Garcia, Hernan G; Jones, Daniel; Phillips, Rob; Kondev, JanePLoS computational biology2011 Mare100110021390269
Human leg model predicts ankle muscle-tendon morphology, state, roles and energetics in walking.Krishnaswamy, Pavitra; Brown, Emery N; Herr, Hugh MPLoS computational biology2011 Mare100110721445231
A Granger causality measure for point process models of ensemble neural spiking activity.Kim, Sanggyun; Putrino, David; Ghosh, Soumya; Brown, Emery NPLoS computational biology2011 Mare100111021455283
A versatile in vivo system for directed dissection of gene expression patterns.Gohl, Daryl M; Silies, Marion A; Gao, Xiaojing J; Bhalerao, Sheetal; Luongo, Francisco J; Lin, Chun-Chieh; Potter, Christopher J; Clandinin, Thomas RNature methods2011 Mar231-721473015
Direct activation of Epac by sulfonylurea is isoform selective.Herbst, Katie J; Coltharp, Carla; Amzel, L Mario; Zhang, JinChemistry & biology2011 Feb 25243-5121338921
Excitatory projection neuron subtypes control the distribution of local inhibitory interneurons in the cerebral cortex.Lodato, Simona; Rouaux, Caroline; Quast, Kathleen B; Jantrachotechatchawan, Chanati; Studer, Michele; Hensch, Takao K; Arlotta, PaolaNeuron2011 Feb 24763-7921338885
Development of proneurogenic, neuroprotective small molecules.MacMillan, Karen S; Naidoo, Jacinth; Liang, Jue; Melito, Lisa; Williams, Noelle S; Morlock, Lorraine; Huntington, Paula J; Estill, Sandi Jo; Longgood, Jamie; Becker, Ginger L; McKnight, Steven L; Pieper, Andrew A; De Brabander, Jef K; Ready, Joseph MJournal of the American Chemical Society2011 Feb 91428-3721210688
Nanofiber membranes with controllable microwells and structural cues and their use in forming cell microarrays and neuronal networks.Xie, Jingwei; Liu, Wenying; MacEwan, Matthew R; Yeh, Yi-Chun; Thomopoulos, Stavros; Xia, YounanSmall (Weinheim an der Bergstrasse, Germany)2011 Feb 7293-721294253
The Yb body, a major site for Piwi-associated RNA biogenesis and a gateway for Piwi expression and transport to the nucleus in somatic cells.Qi, Hongying; Watanabe, Toshiaki; Ku, Hsueh-Yen; Liu, Na; Zhong, Mei; Lin, HaifanThe Journal of biological chemistry2011 Feb 43789-9721106531
Morphological phase diagram for lipid membrane domains with entropic tension.Rim, J E; Ursell, T S; Phillips, R; Klug, W SPhysical review letters2011 Feb 405780121405437
Complex function by design using spatially pre-structured synthetic microbial communities: degradation of pentachlorophenol in the presence of Hg(ii).Kim, Hyun Jung; Du, Wenbin; Ismagilov, Rustem FIntegrative biology : quantitative biosciences from nano to macro2011 Feb126-3320717565
Control of masculinization of the brain and behavior.Wu, Melody V; Shah, Nirao MCurrent opinion in neurobiology2011 Feb116-2320970320
Movement, technology and discovery in the zebrafish.McLean, David L; Fetcho, Joseph RCurrent opinion in neurobiology2011 Feb110-520970321
Efficient decoding with steady-state Kalman filter in neural interface systems.Malik, Wasim Q; Truccolo, Wilson; Brown, Emery N; Hochberg, Leigh RIEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society2011 Feb25-3421078582
Semele: a killer-male, rescue-female system for suppression and replacement of insect disease vector populations.Marshall, John M; Pittman, Geoffrey W; Buchman, Anna B; Hay, Bruce AGenetics2011 Feb535-5121078687
Protein folding in the cell: challenges and progress.Gershenson, Anne; Gierasch, Lila MCurrent opinion in structural biology2011 Feb32-4121112769
In-cell protein NMR and protein leakage.Barnes, Christopher O; Pielak, Gary JProteins2011 Feb347-5121120863
Amygdala volume and social network size in humans.Bickart, Kevin C; Wright, Christopher I; Dautoff, Rebecca J; Dickerson, Bradford C; Barrett, Lisa FeldmanNature neuroscience2011 Feb163-421186358
Closely spaced pregnancies are associated with increased odds of autism in California sibling births.Cheslack-Postava, Keely; Liu, Kayuet; Bearman, Peter SPediatrics2011 Feb246-5321220394
Optogenetic manipulation of neural activity in freely moving Caenorhabditis elegans.Leifer, Andrew M; Fang-Yen, Christopher; Gershow, Marc; Alkema, Mark J; Samuel, Aravinthan D TNature methods2011 Feb147-5221240279
Dynamic local unfolding in the serpin ýý-1 antitrypsin provides a mechanism for loop insertion and polymerization.Krishnan, Beena; Gierasch, Lila MNature structural & molecular biology2011 Feb222-621258324
Considering PTSD from the perspective of brain processes: a psychological construction approach.Suvak, Michael K; Barrett, Lisa FeldmanJournal of traumatic stress2011 Feb3-2421298725
Densely interconnected transcriptional circuits control cell states in human hematopoiesis.Novershtern, Noa; Subramanian, Aravind; Lawton, Lee N; Mak, Raymond H; Haining, W Nicholas; McConkey, Marie E; Habib, Naomi; Yosef, Nir; Chang, Cindy Y; Shay, Tal; Frampton, Garrett M; Drake, Adam C B; Leskov, Ilya; Nilsson, Bjorn; Preffer, Fred; DombkowsCell2011 Jan 21296-30921241896
How one bad protein spoils the barrel: structural details of ýý2-microglobulin amyloidogenicity.Gierasch, Lila MMolecular cell2011 Jan 21129-3121255721
Strain-resolved community genomic analysis of gut microbial colonization in a premature infant.Morowitz, Michael J; Denef, Vincent J; Costello, Elizabeth K; Thomas, Brian C; Poroyko, Valeriy; Relman, David A; Banfield, Jillian FProceedings of the National Academy of Sciences of the United States of America2011 Jan 181128-3321191099
Using mechanobiological mimicry of red blood cells to extend circulation times of hydrogel microparticles.Merkel, Timothy J; Jones, Stephen W; Herlihy, Kevin P; Kersey, Farrell R; Shields, Adam R; Napier, Mary; Luft, J Christopher; Wu, Huali; Zamboni, William C; Wang, Andrew Z; Bear, James E; DeSimone, Joseph MProceedings of the National Academy of Sciences of the United States of America2011 Jan 11586-9121220299
Bacteria as control engineers.Allison, Kyle R; Collins, James JMolecular cell2011 Jan 74-521211717
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Identification of candidate IgG biomarkers for Alzheimer's disease via combinatorial library screening.Reddy, M Muralidhar; Wilson, Rosemary; Wilson, Johnnie; Connell, Steven; Gocke, Anne; Hynan, Linda; German, Dwight; Kodadek, ThomasCell2011 Jan 7132-4221215375
Dynamic assessment of baroreflex control of heart rate during induction of propofol anesthesia using a point process method.Chen, Zhe; Purdon, Patrick L; Harrell, Grace; Pierce, Eric T; Walsh, John; Brown, Emery N; Barbieri, RiccardoAnnals of biomedical engineering2011 Jan260-7620945159
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Point-process analysis of neural spiking activity of muscle spindles recorded from thin-film longitudinal intrafascicular electrodes.Citi, Luca; Djilas, Milan; Azevedo-Coste, Christine; Yoshida, Ken; Brown, Emery N; Barbieri, RiccardoConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20112311-422254803
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Design, synthesis, and characterization of novel nanowire structures for photovoltaics and intracellular probes.Tian, Bozhi; Lieber, Charles MPure and applied chemistry. Chimie pure et appliquee2011 Jan 12153-216922707797
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Thalamocortical model for a propofol-induced alpha-rhythm associated with loss of consciousness.Ching, Shinung; Cimenser, Aylin; Purdon, Patrick L; Brown, Emery N; Kopell, Nancy JProceedings of the National Academy of Sciences of the United States of America2010 Dec 2822665-7021149695
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A computational model predicts Xenopus meiotic spindle organization.Loughlin, Rose; Heald, Rebecca; Nedelec, FrancoisThe Journal of cell biology2010 Dec 271239-4921173114
Tunable bifunctional silyl ether cross-linkers for the design of acid-sensitive biomaterials.Parrott, Matthew C; Luft, J Chris; Byrne, James D; Fain, John H; Napier, Mary E; Desimone, Joseph MJournal of the American Chemical Society2010 Dec 2217928-3221105720
Three-dimensional scaffolds for tissue engineering: the importance of uniformity in pore size and structure.Choi, Sung-Wook; Zhang, Yu; Xia, YounanLangmuir : the ACS journal of surfaces and colloids2010 Dec 2119001-621090781
Fetal and adult hematopoietic stem cells give rise to distinct T cell lineages in humans.Mold, Jeff E; Venkatasubrahmanyam, Shivkumar; Burt, Trevor D; Michaelsson, Jakob; Rivera, Jose M; Galkina, Sofiya A; Weinberg, Kenneth; Stoddart, Cheryl A; McCune, Joseph MScience (New York, N.Y.)2010 Dec 171695-921164017
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IL-22+ CD4+ T cells are associated with therapeutic trichuris trichiura infection in an ulcerative colitis patient.Broadhurst, Mara J; Leung, Jacqueline M; Kashyap, Vikram; McCune, Joseph M; Mahadevan, Uma; McKerrow, James H; Loke, P'ngScience translational medicine2010 Dec 160ra8821123809
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Developmental regulation of group I metabotropic glutamate receptors in the premature brain and their protective role in a rodent model of periventricular leukomalacia.Jantzie, Lauren L; Talos, Delia M; Selip, Debra B; An, Li; Jackson, Michele C; Folkerth, Rebecca D; Deng, Wenbin; Jensen, Frances ENeuron glia biology2010 Nov277-8822169210
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Biocompatibility and Reduced Drug Absorption of Sol-Gel-Treated Poly(dimethyl siloxane) for Microfluidic Cell Culture Applications.Gomez-Sjoberg, Rafael; Leyrat, Anne A; Houseman, Benjamin T; Shokat, Kevan; Quake, Stephen RAnalytical chemistry2010 Oct 1120936785
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Discrete time rescaling theorem: determining goodness of fit for discrete time statistical models of neural spiking.Haslinger, Robert; Pipa, Gordon; Brown, EmeryNeural computation2010 Oct2477-50620608868
Autonomous head-mounted electrophysiology systems for freely behaving primates.Gilja, Vikash; Chestek, Cindy A; Nuyujukian, Paul; Foster, Justin; Shenoy, Krishna VCurrent opinion in neurobiology2010 Oct676-8620655733
Conserved F-actin dynamics and force transmission at cell adhesions.Maruthamuthu, Venkat; Aratyn-Schaus, Yvonne; Gardel, Margaret LCurrent opinion in cell biology2010 Oct583-820728328
Characterization of the proteomes associating with three distinct membrane raft sub-types in murine sperm.Asano, Atsushi; Nelson, Jacquelyn L; Zhang, Sheng; Travis, Alexander JProteomics2010 Oct3494-50520815087
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In obesity and weight loss, all roads lead to the mighty macrophage.Red Eagle, Alex; Chawla, AjayThe Journal of clinical investigation2010 Oct3437-4020877005
The CRAC channel activator STIM1 binds and inhibits L-type voltage-gated calcium channels.Park, Chan Young; Shcheglovitov, Aleksandr; Dolmetsch, RicardoScience (New York, N.Y.)2010 Oct 1101-520929812
Passenger mutations as a marker of clonal cell lineages in emerging neoplasia.Salk, Jesse J; Horwitz, Marshall SSeminars in cancer biology2010 Oct294-30320951806
The role of affective experience in work motivation: Test of a conceptual model.Seo, Myeong-Gu; Bartunek, Jean M; Barrett, Lisa FeldmanJournal of organizational behavior2010 Oct951-96821785527
Radially aligned, electrospun nanofibers as dural substitutes for wound closure and tissue regeneration applications.Xie, Jingwei; Macewan, Matthew R; Ray, Wilson Z; Liu, Wenying; Siewe, Daku Y; Xia, YounanACS nano2010 Sep 285027-3620695478
Probing the micelle-bound aggregation-prone state of ýý-synuclein with (19)F NMR spectroscopy.Wang, Gui-Fang; Li, Conggang; Pielak, Gary JChembiochem : a European journal of chemical biology2010 Sep 241993-620730847
A general mechanism for network-dosage compensation in gene circuits.Acar, Murat; Pando, Bernardo F; Arnold, Frances H; Elowitz, Michael B; van Oudenaarden, AlexanderScience (New York, N.Y.)2010 Sep 241656-6020929850
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Tracking, tuning, and terminating microbial physiology using synthetic riboregulators.Callura, Jarred M; Dwyer, Daniel J; Isaacs, Farren J; Cantor, Charles R; Collins, James JProceedings of the National Academy of Sciences of the United States of America2010 Sep 715898-90320713708
Facile synthesis of Ag nanocubes of 30 to 70 nm in edge length with CF(3)COOAg as a precursor.Zhang, Qiang; Li, Weiyang; Wen, Long-Ping; Chen, Jingyi; Xia, YounanChemistry (Weinheim an der Bergstrasse, Germany)2010 Sep 310234-920593441
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Microbial invasion of the amniotic cavity in pregnancies with small-for-gestational-age fetuses.DiGiulio, Daniel B; Gervasi, Maria Teresa; Romero, Roberto; Vaisbuch, Edi; Mazaki-Tovi, Shali; Kusanovic, Juan Pedro; Seok, Kimberley S; Gomez, Ricardo; Mittal, Pooja; Gotsch, Francesca; Chaiworapongsa, Tinnakorn; Oyarzun, Enrique; Kim, Chong Jai; Relman,Journal of perinatal medicine2010 Sep495-50220482466
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In vivo molecular photoacoustic tomography of melanomas targeted by bioconjugated gold nanocages.Kim, Chulhong; Cho, Eun Chul; Chen, Jingyi; Song, Kwang Hyun; Au, Leslie; Favazza, Christopher; Zhang, Qiang; Cobley, Claire M; Gao, Feng; Xia, Younan; Wang, Lihong VACS nano2010 Aug 244559-6420731439
Chemical stimulation of the Arabidopsis thaliana root using multi-laminar flow on a microfluidic chip.Meier, Matthias; Lucchetta, Elena M; Ismagilov, Rustem FLab on a chip2010 Aug 212147-5320544086
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Three-dimensional, flexible nanoscale field-effect transistors as localized bioprobes.Tian, Bozhi; Cohen-Karni, Tzahi; Qing, Quan; Duan, Xiaojie; Xie, Ping; Lieber, Charles MScience (New York, N.Y.)2010 Aug 13830-420705858
A custody battle for the mind: evidence for extensive imprinting in the brain.Tollkuhn, Jessica; Xu, Xiaohong; Shah, Nirao MNeuron2010 Aug 12359-6220696374
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Genome-wide analysis reveals mechanisms modulating autophagy in normal brain aging and in Alzheimer's disease.Lipinski, Marta M; Zheng, Bin; Lu, Tao; Yan, Zhenyu; Py, Benedicte F; Ng, Aylwin; Xavier, Ramnik J; Li, Cheng; Yankner, Bruce A; Scherzer, Clemens R; Yuan, JunyingProceedings of the National Academy of Sciences of the United States of America2010 Aug 1014164-920660724
Ion-dependent dynamics of DNA ejections for bacteriophage lambda.Wu, David; Van Valen, David; Hu, Qicong; Phillips, RobBiophysical journal2010 Aug 91101-920712993
A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response.Huarte, Maite; Guttman, Mitchell; Feldser, David; Garber, Manuel; Koziol, Magdalena J; Kenzelmann-Broz, Daniela; Khalil, Ahmad M; Zuk, Or; Amit, Ido; Rabani, Michal; Attardi, Laura D; Regev, Aviv; Lander, Eric S; Jacks, Tyler; Rinn, John LCell2010 Aug 6409-1920673990
Regulation of myeloid leukaemia by the cell-fate determinant Musashi.Ito, Takahiro; Kwon, Hyog Young; Zimdahl, Bryan; Congdon, Kendra L; Blum, Jordan; Lento, William E; Zhao, Chen; Lagoo, Anand; Gerrard, Gareth; Foroni, Letizia; Goldman, John; Goh, Harriet; Kim, Soo-Hyun; Kim, Dong-Wook; Chuah, Charles; Oehler, Vivian G; RNature2010 Aug 5765-820639863
Macromolecular crowding remodels the energy landscape of a protein by favoring a more compact unfolded state.Hong, Jiang; Gierasch, Lila MJournal of the American Chemical Society2010 Aug 410445-5220662522
Bacterial diversity in the oral cavity of 10 healthy individuals.Bik, Elisabeth M; Long, Clara Davis; Armitage, Gary C; Loomer, Peter; Emerson, Joanne; Mongodin, Emmanuel F; Nelson, Karen E; Gill, Steven R; Fraser-Liggett, Claire M; Relman, David AThe ISME journal2010 Aug962-7420336157
Roles of monkey premotor neuron classes in movement preparation and execution.Kaufman, Matthew T; Churchland, Mark M; Santhanam, Gopal; Yu, Byron M; Afshar, Afsheen; Ryu, Stephen I; Shenoy, Krishna VJournal of neurophysiology2010 Aug799-81020538784
Reading chimpanzee faces: evidence for the role of verbal labels in categorical perception of emotion.Fugate, Jennifer M B; Gouzoules, Harold; Barrett, Lisa FeldmanEmotion (Washington, D.C.)2010 Aug544-5420677871
Towards A Fully Automated High-Throughput Phototransfection System.Cappelleri, David J; Halasz, Adam; Sul, Jai-Yoon; Kim, Tae Kyung; Eberwine, James; Kumar, VijayJALA (Charlottesville, Va.)2010 Aug 1329-34120706617
Quantifying E. coli proteome and transcriptome with single-molecule sensitivity in single cells.Taniguchi, Yuichi; Choi, Paul J; Li, Gene-Wei; Chen, Huiyi; Babu, Mohan; Hearn, Jeremy; Emili, Andrew; Xie, X SunneyScience (New York, N.Y.)2010 Jul 30533-820671182
Regulation of cell motile behavior by crosstalk between cadherin- and integrin-mediated adhesions.Borghi, Nicolas; Lowndes, Molly; Maruthamuthu, Venkat; Gardel, Margaret L; Nelson, W JamesProceedings of the National Academy of Sciences of the United States of America2010 Jul 2713324-920566866
In vitro mineralization by preosteoblasts in poly(DL-lactide-co-glycolide) inverse opal scaffolds reinforced with hydroxyapatite nanoparticles.Choi, Sung-Wook; Zhang, Yu; Thomopoulos, Stavros; Xia, YounanLangmuir : the ACS journal of surfaces and colloids2010 Jul 2012126-3120450216
Dead-end filling of SlipChip evaluated theoretically and experimentally as a function of the surface chemistry and the gap size between the plates for lubricated and dry SlipChips.Li, Liang; Karymov, Mikhail A; Nichols, Kevin P; Ismagilov, Rustem FLangmuir : the ACS journal of surfaces and colloids2010 Jul 2012465-7120575548
Uniform beads with controllable pore sizes for biomedical applications.Choi, Sung-Wook; Yeh, Yi-Chun; Zhang, Yu; Sung, Hsing-Wen; Xia, YounanSmall (Weinheim an der Bergstrasse, Germany)2010 Jul 191492-820578116
Effects of proteins on protein diffusion.Wang, Yaqiang; Li, Conggang; Pielak, Gary JJournal of the American Chemical Society2010 Jul 149392-720560582
Transient frictional slip between integrin and the ECM in focal adhesions under myosin II tension.Aratyn-Schaus, Yvonne; Gardel, Margaret LCurrent biology : CB2010 Jul 131145-5320541412
Discovery of a proneurogenic, neuroprotective chemical.Pieper, Andrew A; Xie, Shanhai; Capota, Emanuela; Estill, Sandi Jo; Zhong, Jeannie; Long, Jeffrey M; Becker, Ginger L; Huntington, Paula; Goldman, Shauna E; Shen, Ching-Han; Capota, Maria; Britt, Jeremiah K; Kotti, Tiina; Ure, Kerstin; Brat, Daniel J; WilCell2010 Jul 939-5120603013
Genetic technologies. Synthetic "life," ethics, national security, and public discourse.Cho, Mildred K; Relman, David AScience (New York, N.Y.)2010 Jul 238-920595601
Prevalence and diversity of microbes in the amniotic fluid, the fetal inflammatory response, and pregnancy outcome in women with preterm pre-labor rupture of membranes.DiGiulio, Daniel B; Romero, Roberto; Kusanovic, Juan Pedro; Gomez, Ricardo; Kim, Chong Jai; Seok, Kimberley S; Gotsch, Francesca; Mazaki-Tovi, Shali; Vaisbuch, Edi; Sanders, Katherine; Bik, Elisabeth M; Chaiworapongsa, Tinnakorn; Oyarzun, Enrique; Relman,American journal of reproductive immunology (New York, N.Y. : 1989)2010 Jul 138-5720331587
ZiFiT (Zinc Finger Targeter): an updated zinc finger engineering tool.Sander, Jeffry D; Maeder, Morgan L; Reyon, Deepak; Voytas, Daniel F; Joung, J Keith; Dobbs, DrenaNucleic acids research2010 JulW462-820435679
Lin28a transgenic mice manifest size and puberty phenotypes identified in human genetic association studies.Zhu, Hao; Shah, Samar; Shyh-Chang, Ng; Shinoda, Gen; Einhorn, William S; Viswanathan, Srinivas R; Takeuchi, Ayumu; Grasemann, Corinna; Rinn, John L; Lopez, Mary F; Hirschhorn, Joel N; Palmert, Mark R; Daley, George QNature genetics2010 Jul626-3020512147
A forward-genetic screen and dynamic analysis of lambda phage host-dependencies reveals an extensive interaction network and a new anti-viral strategy.Maynard, Nathaniel D; Birch, Elsa W; Sanghvi, Jayodita C; Chen, Lu; Gutschow, Miriam V; Covert, Markus WPLoS genetics2010 Jule100101720628568
The virus as metabolic engineer.Maynard, Nathaniel D; Gutschow, Miriam V; Birch, Elsa W; Covert, Markus WBiotechnology journal2010 Jul686-9420665642
High frequency targeted mutagenesis in Arabidopsis thaliana using zinc finger nucleases.Zhang, Feng; Maeder, Morgan L; Unger-Wallace, Erica; Hoshaw, Justin P; Reyon, Deepak; Christian, Michelle; Li, Xiaohong; Pierick, Christopher J; Dobbs, Drena; Peterson, Thomas; Joung, J Keith; Voytas, Daniel FProceedings of the National Academy of Sciences of the United States of America2010 Jun 2912028-3320508152
Synthetic strategies for studying embryonic development.Ouyang, Xiaohu; Chen, James KChemistry & biology2010 Jun 25590-60620609409
Establishing the design rules for DNA-mediated programmable colloidal crystallization.Macfarlane, Robert J; Jones, Matthew R; Senesi, Andrew J; Young, Kaylie L; Lee, Byeongdu; Wu, Jinsong; Mirkin, Chad AAngewandte Chemie (International ed. in English)2010 Jun 214589-9220486143
Differential involvement of excitatory and inhibitory neurons of cat motor cortex in coincident spike activity related to behavioral context.Putrino, David; Brown, Emery N; Mastaglia, Frank L; Ghosh, SoumyaThe Journal of neuroscience : the official journal of the Society for Neuroscience2010 Jun 98048-5620534853
Conversion of a yeast prion protein to an infectious form in bacteria.Garrity, Sean J; Sivanathan, Viknesh; Dong, Jijun; Lindquist, Susan; Hochschild, AnnProceedings of the National Academy of Sciences of the United States of America2010 Jun 810596-60120484678
Regulatory and metabolic rewiring during laboratory evolution of ethanol tolerance in E. coli.Goodarzi, Hani; Bennett, Bryson D; Amini, Sasan; Reaves, Marshall L; Hottes, Alison K; Rabinowitz, Joshua D; Tavazoie, SaeedMolecular systems biology2010 Jun 837820531407
Characterizing nonlinear heartbeat dynamics within a point process framework.Chen, Zhe; Brown, Emery N; Barbieri, RiccardoIEEE transactions on bio-medical engineering2010 Jun1335-4720172783
Using point process models to compare neural spiking activity in the subthalamic nucleus of Parkinson's patients and a healthy primate.Sarma, Sridevi V; Eden, Uri T; Cheng, Ming L; Williams, Ziv M; Hu, Rollin; Eskandar, Emad; Brown, Emery NIEEE transactions on bio-medical engineering2010 Jun1297-30520172804
RNA: state memory and mediator of cellular phenotype.Kim, Junhyong; Eberwine, JamesTrends in cell biology2010 Jun311-820382532
How antibiotics kill bacteria: from targets to networks.Kohanski, Michael A; Dwyer, Daniel J; Collins, James JNature reviews. Microbiology2010 Jun423-3520440275
Nanoliter multiplex PCR arrays on a SlipChip.Shen, Feng; Du, Wenbin; Davydova, Elena K; Karymov, Mikhail A; Pandey, Janmajay; Ismagilov, Rustem FAnalytical chemistry2010 Jun 14606-1220446698
Control of macrophage activation and function by PPARs.Chawla, AjayCirculation research2010 May 281559-6920508200
Unique physical properties and interactions of the domains of methylated DNA binding protein 2.Ghosh, Rajarshi P; Nikitina, Tatiana; Horowitz-Scherer, Rachel A; Gierasch, Lila M; Uversky, Vladimir N; Hite, Kristopher; Hansen, Jeffrey C; Woodcock, Christopher LBiochemistry2010 May 254395-41020405910
Fabrication of Density Gradients of Biodegradable Polymer Microparticles and Their Use in Guiding Neurite Outgrowth.Li, Xiaoran; Macewan, Matthew R; Xie Dr, Jingwei; Siewe, Daku; Yuan, Xiaoyan; Xia, YounanAdvanced functional materials2010 May 251632-163721687818
Effects of thymic selection of the T-cell repertoire on HLA class I-associated control of HIV infection.Kosmrlj, Andrej; Read, Elizabeth L; Qi, Ying; Allen, Todd M; Altfeld, Marcus; Deeks, Steven G; Pereyra, Florencia; Carrington, Mary; Walker, Bruce D; Chakraborty, Arup KNature2010 May 20350-420445539
Tryptophan catabolism by indoleamine 2,3-dioxygenase 1 alters the balance of TH17 to regulatory T cells in HIV disease.Favre, David; Mold, Jeff; Hunt, Peter W; Kanwar, Bittoo; Loke, P'ng; Seu, Lillian; Barbour, Jason D; Lowe, Margaret M; Jayawardene, Anura; Aweeka, Francesca; Huang, Yong; Douek, Daniel C; Brenchley, Jason M; Martin, Jeffrey N; Hecht, Frederick M; Deeks, SScience translational medicine2010 May 1932ra3620484731
Optimization of traction force microscopy for micron-sized focal adhesions.Stricker, Jonathan; Sabass, Benedikt; Schwarz, Ulrich S; Gardel, Margaret LJournal of physics. Condensed matter : an Institute of Physics journal2010 May 1919410420523913
Cell-substrate interactions.Gardel, Margaret; Schwarz, UlrichJournal of physics. Condensed matter : an Institute of Physics journal2010 May 1919030121386358
Colloquium paper: working toward a synthesis of archaeological, linguistic, and genetic data for inferring African population history.Scheinfeldt, Laura B; Soi, Sameer; Tishkoff, Sarah AProceedings of the National Academy of Sciences of the United States of America2010 May 118931-820445100
Seed-mediated synthesis of truncated gold decahedrons with a AuCl/oleylamine complex as precursor.Ma, Yanyun; Zeng, Jie; Li, Weiyang; McKiernan, Maureen; Xie, Zhaoxiong; Xia, YounanAdvanced materials (Deerfield Beach, Fla.)2010 May 41930-420301132
Bright three-photon luminescence from gold/silver alloyed nanostructures for bioimaging with negligible photothermal toxicity.Tong, Ling; Cobley, Claire M; Chen, Jingyi; Xia, Younan; Cheng, Ji-XinAngewandte Chemie (International ed. in English)2010 May 33485-820544899
The spatial structure of autism in California, 1993-2001.Mazumdar, Soumya; King, Marissa; Liu, Ka-Yuet; Zerubavel, Noam; Bearman, PeterHealth & place2010 May539-4620097113
Targeting gold nanocages to cancer cells for photothermal destruction and drug delivery.Cobley, Claire M; Au, Leslie; Chen, Jingyi; Xia, YounanExpert opinion on drug delivery2010 May577-8720345327
Synthetic biology: applications come of age.Khalil, Ahmad S; Collins, James JNature reviews. Genetics2010 May367-7920395970
The miR-17-92 microRNA polycistron regulates MLL leukemia stem cell potential by modulating p21 expression.Wong, Piu; Iwasaki, Masayuki; Somervaille, Tim C P; Ficara, Francesca; Carico, Christine; Arnold, Christopher; Chen, Chang-Zheng; Cleary, Michael LCancer research2010 May 13833-4220406979
Dynamic single-cell imaging of direct reprogramming reveals an early specifying event.Smith, Zachary D; Nachman, Iftach; Regev, Aviv; Meissner, AlexanderNature biotechnology2010 May521-620436460
Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs.Guttman, Mitchell; Garber, Manuel; Levin, Joshua Z; Donaghey, Julie; Robinson, James; Adiconis, Xian; Fan, Lin; Koziol, Magdalena J; Gnirke, Andreas; Nusbaum, Chad; Rinn, John L; Lander, Eric S; Regev, AvivNature biotechnology2010 May503-1020436462
Social demographic change and autism.Liu, Kayuet; Zerubavel, Noam; Bearman, PeterDemography2010 May327-4320608100
Design and Implementation of Functional Nanoelectronic Interfaces With Biomolecules, Cells, and Tissue Using Nanowire Device Arrays.Timko, Brian P; Cohen-Karni, Tzahi; Qing, Quan; Tian, Bozhi; Lieber, Charles MIEEE transactions on nanotechnology2010 May269-28021785576
Knockdown of Fanconi anemia genes in human embryonic stem cells reveals early developmental defects in the hematopoietic lineage.Tulpule, Asmin; Lensch, M William; Miller, Justine D; Austin, Karyn; D'Andrea, Alan; Schlaeger, Thorsten M; Shimamura, Akiko; Daley, George QBlood2010 Apr 293453-6220089964
The androgen receptor governs the execution, but not programming, of male sexual and territorial behaviors.Juntti, Scott A; Tollkuhn, Jessica; Wu, Melody V; Fraser, Eleanor J; Soderborg, Taylor; Tan, Stella; Honda, Shin-Ichiro; Harada, Nobuhiro; Shah, Nirao MNeuron2010 Apr 29260-7220435002
Gold nanoparticles for biology and medicine.Giljohann, David A; Seferos, Dwight S; Daniel, Weston L; Massich, Matthew D; Patel, Pinal C; Mirkin, Chad AAngewandte Chemie (International ed. in English)2010 Apr 263280-9420401880
SlipChip for immunoassays in nanoliter volumes.Liu, Weishan; Chen, Delai; Du, Wenbin; Nichols, Kevin P; Ismagilov, Rustem FAnalytical chemistry2010 Apr 153276-8220334360
Gold nanocages as photothermal transducers for cancer treatment.Chen, Jingyi; Glaus, Charles; Laforest, Richard; Zhang, Qiang; Yang, Miaoxian; Gidding, Michael; Welch, Michael J; Xia, YounanSmall (Weinheim an der Bergstrasse, Germany)2010 Apr 9811-720225187
Genome-wide dissection of microRNA functions and cotargeting networks using gene set signatures.Tsang, John S; Ebert, Margaret S; van Oudenaarden, AlexanderMolecular cell2010 Apr 9140-5320385095
Chromatin signature of embryonic pluripotency is established during genome activation.Vastenhouw, Nadine L; Zhang, Yong; Woods, Ian G; Imam, Farhad; Regev, Aviv; Liu, X Shirley; Rinn, John; Schier, Alexander FNature2010 Apr 8922-620336069
Digital transcriptome profiling from attomole-level RNA samples.Ozsolak, Fatih; Goren, Alon; Gymrek, Melissa; Guttman, Mitchell; Regev, Aviv; Bernstein, Bradley E; Milos, Patrice MGenome research2010 Apr519-2520133332
Activity in the barrel cortex during active behavior and sleep.Vijayan, Sujith; Hale, Greg J; Moore, Christopher I; Brown, Emery N; Wilson, MatthewJournal of neurophysiology2010 Apr2074-8420164403
Expression of the autoimmune susceptibility gene FcRL3 on human regulatory T cells is associated with dysfunction and high levels of programmed cell death-1.Swainson, Louise A; Mold, Jeff E; Bajpai, Urmila D; McCune, Joseph MJournal of immunology (Baltimore, Md. : 1950)2010 Apr 13639-4720190142
Potent and selective photo-inactivation of proteins with peptoid-ruthenium conjugates.Lee, Jiyong; Udugamasooriya, D Gomika; Lim, Hyun-Suk; Kodadek, ThomasNature chemical biology2010 Apr258-6020228793
Context is routinely encoded during emotion perception.Barrett, Lisa Feldman; Kensinger, Elizabeth APsychological science2010 Apr595-920424107
Gold Nanopyramids Assembled into High-Order Stacks Exhibit Increased SERS Response.Stoerzinger, Kelsey A; Hasan, Warefta; Lin, Julia Y; Robles, Alex; Odom, Teri WThe journal of physical chemistry letters2010 Apr 11046-105021666758
Neural mechanisms of ageing and cognitive decline.Bishop, Nicholas A; Lu, Tao; Yankner, Bruce ANature2010 Mar 25529-3520336135
Navigational decision making in Drosophila thermotaxis.Luo, Linjiao; Gershow, Marc; Rosenzweig, Mark; Kang, Kyeongjin; Fang-Yen, Christopher; Garrity, Paul A; Samuel, Aravinthan D TThe Journal of neuroscience : the official journal of the Society for Neuroscience2010 Mar 244261-7220335462
Gene duplication and the evolution of ribosomal protein gene regulation in yeast.Wapinski, Ilan; Pfiffner, Jenna; French, Courtney; Socha, Amanda; Thompson, Dawn Anne; Regev, AvivProceedings of the National Academy of Sciences of the United States of America2010 Mar 235505-1020212107
Visualization of JNK activity dynamics with a genetically encoded fluorescent biosensor.Fosbrink, Matthew; Aye-Han, Nwe-Nwe; Cheong, Raymond; Levchenko, Andre; Zhang, JinProceedings of the National Academy of Sciences of the United States of America2010 Mar 235459-6420212108
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium.Ma, Li-Jun; van der Does, H Charlotte; Borkovich, Katherine A; Coleman, Jeffrey J; Daboussi, Marie-Josee; Di Pietro, Antonio; Dufresne, Marie; Freitag, Michael; Grabherr, Manfred; Henrissat, Bernard; Houterman, Petra M; Kang, Seogchan; Shim, Won-Bo; WolosNature2010 Mar 18367-7320237561
Picomole-scale characterization of protein stability and function by quantitative cysteine reactivity.Isom, Daniel G; Vardy, Eyal; Oas, Terrence G; Hellinga, Homme WProceedings of the National Academy of Sciences of the United States of America2010 Mar 164908-1320194783
Telomere elongation in induced pluripotent stem cells from dyskeratosis congenita patients.Agarwal, Suneet; Loh, Yuin-Han; McLoughlin, Erin M; Huang, Junjiu; Park, In-Hyun; Miller, Justine D; Huo, Hongguang; Okuka, Maja; Dos Reis, Rosana Maria; Loewer, Sabine; Ng, Huck-Hui; Keefe, David L; Goldman, Frederick D; Klingelhutz, Aloysius J; Liu, LinNature2010 Mar 11292-620164838
Graphene and nanowire transistors for cellular interfaces and electrical recording.Cohen-Karni, Tzahi; Qing, Quan; Li, Qiang; Fang, Ying; Lieber, Charles MNano letters2010 Mar 101098-10220136098
Colorimetric Cu(2+) detection using DNA-modified gold-nanoparticle aggregates as probes and click chemistry.Xu, Xiaoyang; Daniel, Weston L; Wei, Wei; Mirkin, Chad ASmall (Weinheim an der Bergstrasse, Germany)2010 Mar 8623-620108231
A simple spectroscopic method for differentiating cellular uptakes of gold nanospheres and nanorods from their mixtures.Cho, Eun Chul; Liu, Yang; Xia, YounanAngewandte Chemie (International ed. in English)2010 Mar 81976-8020146292
Total synthesis of the polycyclic fungal metabolite (+/-)-communesin F.Liu, Peng; Seo, Jae Hong; Weinreb, Steven MAngewandte Chemie (International ed. in English)2010 Mar 82000-320175174
Dissolving Ag from Au-Ag Alloy Nanoboxes with H(2)O(2): A Method for Both Tailoring the Optical Properties and Measuring the H(2)O(2) Concentration.Zhang, Qiang; Cobley, Claire M; Zeng, Jie; Wen, Long-Ping; Chen, Jingyi; Xia, YounanThe journal of physical chemistry. C, Nanomaterials and interfaces2010 Mar 56396-640020495675
Estimated autism risk, older reproductive age, and parameterization.Durkin, Maureen S; Maenner, Matthew J; Newschaffer, Craig JAmerican journal of public health2010 Mar389-90; author reply 39020075308
Stimulus onset quenches neural variability: a widespread cortical phenomenon.Churchland, Mark M; Yu, Byron M; Cunningham, John P; Sugrue, Leo P; Cohen, Marlene R; Corrado, Greg S; Newsome, William T; Clark, Andrew M; Hosseini, Paymon; Scott, Benjamin B; Bradley, David C; Smith, Matthew A; Kohn, Adam; Movshon, J Anthony; Armstrong,Nature neuroscience2010 Mar369-7820173745
Microfluidic stochastic confinement enhances analysis of rare cells by isolating cells and creating high density environments for control of diffusible signals.Vincent, Meghan E; Liu, Weishan; Haney, Elizabeth B; Ismagilov, Rustem FChemical Society reviews2010 Mar974-8420179819
Oligonucleotide-based tools for studying zebrafish development.Shestopalov, Ilya A; Chen, James KZebrafish2010 Mar31-4020392138
Social influence and the autism epidemic.Liu, Ka-Yuet; King, Marissa; Bearman, Peter SAJS; American journal of sociology2010 Mar1387-43420503647
The evolution of human genetic and phenotypic variation in Africa.Campbell, Michael C; Tishkoff, Sarah ACurrent biology : CB2010 Feb 23R166-7320178763
The effects of size, shape, and surface functional group of gold nanostructures on their adsorption and internalization by cells.Cho, Eun Chul; Au, Leslie; Zhang, Qiang; Xia, YounanSmall (Weinheim an der Bergstrasse, Germany)2010 Feb 22517-2220029850
Variability in gene expression underlies incomplete penetrance.Raj, Arjun; Rifkin, Scott A; Andersen, Erik; van Oudenaarden, AlexanderNature2010 Feb 18913-820164922
Understanding the SERS Effects of Single Silver Nanoparticles and Their Dimers, One at a Time.Rycenga, Matthew; Camargo, Pedro H C; Li, Weiyang; Moran, Christine H; Xia, YounanThe journal of physical chemistry letters2010 Feb 18696-70320368749
Nature's molecular sponges: small heat shock proteins grow into their chaperone roles.Eyles, Stephen J; Gierasch, Lila MProceedings of the National Academy of Sciences of the United States of America2010 Feb 162727-820133678
Sublethal antibiotic treatment leads to multidrug resistance via radical-induced mutagenesis.Kohanski, Michael A; DePristo, Mark A; Collins, James JMolecular cell2010 Feb 12311-2020159551
Subthreshold regime has the optimal sensitivity for nanowire FET biosensors.Gao, Xuan P A; Zheng, Gengfeng; Lieber, Charles MNano letters2010 Feb 10547-5219908823
Single-molecule study of DNA polymerization activity of HIV-1 reverse transcriptase on DNA templates.Kim, Sangjin; Schroeder, Charles M; Xie, X SunneyJournal of molecular biology2010 Feb 5995-100619968999
Vertical silicon nanowires as a universal platform for delivering biomolecules into living cells.Shalek, Alex K; Robinson, Jacob T; Karp, Ethan S; Lee, Jin Seok; Ahn, Dae-Ro; Yoon, Myung-Han; Sutton, Amy; Jorgolli, Marsela; Gertner, Rona S; Gujral, Taranjit S; MacBeath, Gavin; Yang, Eun Gyeong; Park, HongkunProceedings of the National Academy of Sciences of the United States of America2010 Feb 21870-520080678
Nanowire transistor arrays for mapping neural circuits in acute brain slices.Qing, Quan; Pal, Sumon K; Tian, Bozhi; Duan, Xiaojie; Timko, Brian P; Cohen-Karni, Tzahi; Murthy, Venkatesh N; Lieber, Charles MProceedings of the National Academy of Sciences of the United States of America2010 Feb 21882-720133836
Novelty as a dimension in the affective brain.Weierich, Mariann R; Wright, Christopher I; Negreira, Alyson; Dickerson, Brad C; Barrett, Lisa FeldmanNeuroImage2010 Feb 12871-819796697
A bioreactor for in-cell protein NMR.Sharaf, Naima G; Barnes, Christopher O; Charlton, Lisa M; Young, Gregory B; Pielak, Gary JJournal of magnetic resonance (San Diego, Calif. : 1997)2010 Feb140-619910228
Genome editing with modularly assembled zinc-finger nucleases.Kim, Jin-Soo; Lee, Hyung Joo; Carroll, DanaNature methods2010 Feb91; author reply 91-220111032
IFN-alpha-induced upregulation of CCR5 leads to expanded HIV tropism in vivo.Stoddart, Cheryl A; Keir, Mary E; McCune, Joseph MPLoS pathogens2010 Febe100076620174557
Seamless bead to microarray screening: rapid identification of the highest affinity protein ligands from large combinatorial libraries.Astle, John M; Simpson, Levi S; Huang, Yong; Reddy, M Muralidhar; Wilson, Rosemary; Connell, Steven; Wilson, Johnnie; Kodadek, ThomasChemistry & biology2010 Jan 2938-4520142039
Quantifying the cellular uptake of antibody-conjugated Au nanocages by two-photon microscopy and inductively coupled plasma mass spectrometry.Au, Leslie; Zhang, Qiang; Cobley, Claire M; Gidding, Michael; Schwartz, Andrea G; Chen, Jingyi; Xia, YounanACS nano2010 Jan 2635-4219954236
Controlling destiny through chemistry: small-molecule regulators of cell fate.Firestone, Ari J; Chen, James KACS chemical biology2010 Jan 1515-3420000447
User-loaded SlipChip for equipment-free multiplexed nanoliter-scale experiments.Li, Liang; Du, Wenbin; Ismagilov, RustemJournal of the American Chemical Society2010 Jan 13106-1120000708
Multiparameter screening on SlipChip used for nanoliter protein crystallization combining free interface diffusion and microbatch methods.Li, Liang; Du, Wenbin; Ismagilov, Rustem FJournal of the American Chemical Society2010 Jan 13112-920000709
Protein (19)F NMR in Escherichia coli.Li, Conggang; Wang, Gui-Fang; Wang, Yaqiang; Creager-Allen, Rachel; Lutz, Evan A; Scronce, Heidi; Slade, Kristin M; Ruf, Rebecca A S; Mehl, Ryan A; Pielak, Gary JJournal of the American Chemical Society2010 Jan 13321-720050707
Genome-wide patterns of population structure and admixture in West Africans and African Americans.Bryc, Katarzyna; Auton, Adam; Nelson, Matthew R; Oksenberg, Jorge R; Hauser, Stephen L; Williams, Scott; Froment, Alain; Bodo, Jean-Marie; Wambebe, Charles; Tishkoff, Sarah A; Bustamante, Carlos DProceedings of the National Academy of Sciences of the United States of America2010 Jan 12786-9120080753
Optical Properties of Nested Pyramidal Nanoshells.Lin, Julia Y; Hasan, Warefta; Yang, Jiun-Chan; Odom, Teri WThe journal of physical chemistry. C, Nanomaterials and interfaces2010 Jan 87432-743520431688
Mechanics of the F-actin cytoskeleton.Stricker, Jonathan; Falzone, Tobias; Gardel, Margaret LJournal of biomechanics2010 Jan 59-1419913792
Synthesis of gold microplates using bovine serum albumin as a reductant and a stabilizer.Au, Leslie; Lim, Byungkwon; Colletti, Peter; Jun, Young-Shin; Xia, YounanChemistry, an Asian journal2010 Jan 4123-919967737
Mechanical integration of actin and adhesion dynamics in cell migration.Gardel, Margaret L; Schneider, Ian C; Aratyn-Schaus, Yvonne; Waterman, Clare MAnnual review of cell and developmental biology2010315-3319575647
Insulin causes hyperthermia by direct inhibition of warm-sensitive neurons.Sanchez-Alavez, Manuel; Tabarean, Iustin V; Osborn, Olivia; Mitsukawa, Kayo; Schaefer, Jean; Dubins, Jeffrey; Holmberg, Kristina H; Klein, Izabella; Klaus, Joe; Gomez, Luis F; Kolb, Hartmuth; Secrest, James; Jochems, Jeanine; Myashiro, Kevin; Buckley, PetDiabetes2010 Jan43-5019846801
Generation of functional human hepatic endoderm from human induced pluripotent stem cells.Sullivan, Gareth J; Hay, David C; Park, In-Hyun; Fletcher, Judy; Hannoun, Zara; Payne, Catherine M; Dalgetty, Donna; Black, James R; Ross, James A; Samuel, Kay; Wang, Gang; Daley, George Q; Lee, Je-Hyuk; Church, George M; Forbes, Stuart J; Iredale, John PHepatology (Baltimore, Md.)2010 Jan329-3519877180
Autologous blood cell therapies from pluripotent stem cells.Lengerke, Claudia; Daley, George QBlood reviews2010 Jan27-3719910091
State-space algorithms for estimating spike rate functions.Smith, Anne C; Scalon, Joao D; Wirth, Sylvia; Yanike, Marianna; Suzuki, Wendy A; Brown, Emery NComputational intelligence and neuroscience201042653919911062
Etching and dimerization: a simple and versatile route to dimers of silver nanospheres with a range of sizes.Li, Weiyang; Camargo, Pedro H C; Au, Leslie; Zhang, Qiang; Rycenga, Matthew; Xia, YounanAngewandte Chemie (International ed. in English)2010164-819943304
Targeting device therapy: genomics of sudden death.Frangiskakis, J Michael; London, BarryHeart failure clinics2010 Jan93-10019945065
Chromatin profiling by directly sequencing small quantities of immunoprecipitated DNA.Goren, Alon; Ozsolak, Fatih; Shoresh, Noam; Ku, Manching; Adli, Mazhar; Hart, Chris; Gymrek, Melissa; Zuk, Or; Regev, Aviv; Milos, Patrice M; Bernstein, Bradley ENature methods2010 Jan47-919946276
Cytomegalovirus-specific T cells persist at very high levels during long-term antiretroviral treatment of HIV disease.Naeger, David M; Martin, Jeffrey N; Sinclair, Elizabeth; Hunt, Peter W; Bangsberg, David R; Hecht, Frederick; Hsue, Priscilla; McCune, Joseph M; Deeks, Steven GPloS one2010e888620126452
Phylogenetic analysis of developmental and postnatal mouse cell lineages.Salipante, Stephen J; Kas, Arnold; McMonagle, Eva; Horwitz, Marshall SEvolution & development2010 Jan-Feb84-9420156285
Measuring the SERS Enhancement Factors of Dimers with Different Structures Constructed from Silver Nanocubes.Camargo, Pedro H C; Au, Leslie; Rycenga, Matthew; Li, Weiyang; Xia, YounanChemical physics letters2010 Jan304-30820209069
The role of nucleosome positioning in the evolution of gene regulation.Tsankov, Alexander M; Thompson, Dawn Anne; Socha, Amanda; Regev, Aviv; Rando, Oliver JPLoS biology2010e100041420625544
Electrospun nanofibers for neural tissue engineering.Xie, Jingwei; MacEwan, Matthew R; Schwartz, Andrea G; Xia, YounanNanoscale2010 Jan35-4420648362
Engineering single Cys2His2 zinc finger domains using a bacterial cell-based two-hybrid selection system.Thibodeau-Beganny, Stacey; Maeder, Morgan L; Joung, J KeithMethods in molecular biology (Clifton, N.J.)201031-5020680826
Strand-specific RNA sequencing reveals extensive regulated long antisense transcripts that are conserved across yeast species.Yassour, Moran; Pfiffner, Jenna; Levin, Joshua Z; Adiconis, Xian; Gnirke, Andreas; Nusbaum, Chad; Thompson, Dawn-Anne; Friedman, Nir; Regev, AvivGenome biology2010R8720796282
Reconstructing gene histories in Ascomycota fungi.Wapinski, Ilan; Regev, AvivMethods in enzymology2010447-8520946821
Living the high life: high-altitude adaptation.Scheinfeldt, Laura B; Tishkoff, Sarah AGenome biology201013320979669
Predicting success of oligomerized pool engineering (OPEN) for zinc finger target site sequences.Sander, Jeffry D; Reyon, Deepak; Maeder, Morgan L; Foley, Jonathan E; Thibodeau-Beganny, Stacey; Li, Xiaohong; Regan, Maureen R; Dahlborg, Elizabeth J; Goodwin, Mathew J; Fu, Fengli; Voytas, Daniel F; Joung, J Keith; Dobbs, DrenaBMC bioinformatics201054321044337
Point process time-frequency analysis of respiratory sinus arrhythmia under altered respiration dynamics.Kodituwakku, Sandun; Lazar, Sara W; Indic, Premananda; Brown, Emery N; Barbieri, RiccardoConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20101622-521096135
The Fitzhugh-Nagumo model: Firing modes with time-varying parameters & parameter estimation.Faghih, Rose T; Savla, Ketan; Dahleh, Munther A; Brown, Emery NConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20104116-921096631
Psychophysiological signals associated with affective states.Mauri, Maurizio; Magagnin, Valentina; Cipresso, Pietro; Mainardi, Luca; Brown, Emery N; Cerutti, Sergio; Villamira, Marco; Barbieri, RiccardoConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20103563-621096828
A differential autoregressive modeling approach within a point process framework for non-stationary heartbeat intervals analysis.Chen, Zhe; Purdon, Patrick L; Brown, Emery N; Barbieri, RiccardoConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20103567-7021096829
Low-dimensional neural features predict muscle EMG signals.Rivera-Alvidrez, Zuley; Kalmar, Rachel S; Ryu, Stephen I; Shenoy, Krishna VConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20106027-3321097116
Association of the small GTPase Rheb with the NMDA receptor subunit NR3A.Sucher, Nikolaus J; Yu, Eric; Chan, Shing Fai; Miri, Mitra; Lee, Benjamin J; Xiao, Bo; Worley, Paul F; Jensen, Frances ENeuro-Signals2010203-921135540
Preparation of complaint matrices for quantifying cellular contraction.Aratyn-Schaus, Yvonne; Oakes, Patrick W; Stricker, Jonathan; Winter, Stephen P; Gardel, Margaret LJournal of visualized experiments : JoVE201021178972
CXCR6, a newly defined biomarker of tissue-specific stem cell asymmetric self-renewal, identifies more aggressive human melanoma cancer stem cells.Taghizadeh, Rouzbeh; Noh, Minsoo; Huh, Yang Hoon; Ciusani, Emilio; Sigalotti, Luca; Maio, Michele; Arosio, Beatrice; Nicotra, Maria R; Natali, PierGiorgio; Sherley, James L; La Porta, Caterina A MPloS one2010e1518321203549
A physical and regulatory map of host-influenza interactions reveals pathways in H1N1 infection.Shapira, Sagi D; Gat-Viks, Irit; Shum, Bennett O V; Dricot, Amelie; de Grace, Marciela M; Wu, Liguo; Gupta, Piyush B; Hao, Tong; Silver, Serena J; Root, David E; Hill, David E; Regev, Aviv; Hacohen, NirCell2009 Dec 241255-6720064372
A feeling for the numbers in biology.Phillips, Rob; Milo, RonProceedings of the National Academy of Sciences of the United States of America2009 Dec 2221465-7120018695
Fungal regulatory evolution: cis and trans in the balance.Thompson, Dawn Anne; Regev, AvivFEBS letters2009 Dec 173959-6519914250
Growth landscape formed by perception and import of glucose in yeast.Youk, Hyun; van Oudenaarden, AlexanderNature2009 Dec 17875-920016593
Metal-polymer hybrid colloidal particles with an eccentric structure.Ohnuma, Akira; Cho, Eun Chul; Jiang, Majiong; Ohtani, Bunsho; Xia, YounanLangmuir : the ACS journal of surfaces and colloids2009 Dec 1513880-719621917
Hydroxyurea induces hydroxyl radical-mediated cell death in Escherichia coli.Davies, Bryan W; Kohanski, Michael A; Simmons, Lyle A; Winkler, Jonathan A; Collins, James J; Walker, Graham CMolecular cell2009 Dec 11845-6020005847
Revealing global regulatory perturbations across human cancers.Goodarzi, Hani; Elemento, Olivier; Tavazoie, SaeedMolecular cell2009 Dec 11900-1120005852
Plant science. DNA binding made easy.Voytas, Daniel F; Joung, J KeithScience (New York, N.Y.)2009 Dec 111491-220007890
Clonal expansions in ulcerative colitis identify patients with neoplasia.Salk, Jesse J; Salipante, Stephen J; Risques, Rosa Ana; Crispin, David A; Li, Lin; Bronner, Mary P; Brentnall, Teresa A; Rabinovitch, Peter S; Horwitz, Marshall S; Loeb, Lawrence AProceedings of the National Academy of Sciences of the United States of America2009 Dec 820871-619926851
Facile synthesis of gold icosahedra in an aqueous solution by reacting HAuCl(4) with N-vinyl pyrrolidone.Yavuz, Mustafa S; Li, Weiyang; Xia, YounanChemistry (Weinheim an der Bergstrasse, Germany)2009 Dec 713181-719876970
Altered development of glutamatergic synapses in layer V pyramidal neurons in NR3A knockout mice.Zhou, Chengwen; Jensen, Frances E; Sucher, Nikolaus JMolecular and cellular neurosciences2009 Dec419-2619782137
From elements to modules: regulatory evolution in Ascomycota fungi.Wohlbach, Dana J; Thompson, Dawn Anne; Gasch, Audrey P; Regev, AvivCurrent opinion in genetics & development2009 Dec571-819879128
Gold nanocages covered by smart polymers for controlled release with near-infrared light.Yavuz, Mustafa S; Cheng, Yiyun; Chen, Jingyi; Cobley, Claire M; Zhang, Qiang; Rycenga, Matthew; Xie, Jingwei; Kim, Chulhong; Song, Kwang H; Schwartz, Andrea G; Wang, Lihong V; Xia, YounanNature materials2009 Dec935-919881498
Single-crystalline kinked semiconductor nanowire superstructures.Tian, Bozhi; Xie, Ping; Kempa, Thomas J; Bell, David C; Lieber, Charles MNature nanotechnology2009 Dec824-919893521
Caenorhabditis elegans: a model system for systems neuroscience.Sengupta, Piali; Samuel, Aravinthan D TCurrent opinion in neurobiology2009 Dec637-4319896359
Synthetic biology: understanding biological design from synthetic circuits.Mukherji, Shankar; van Oudenaarden, AlexanderNature reviews. Genetics2009 Dec859-7119898500
Neonatal seizures: an update on mechanisms and management.Jensen, Frances EClinics in perinatology2009 Dec881-900, vii19944840
Next-generation synthetic gene networks.Lu, Timothy K; Khalil, Ahmad S; Collins, James JNature biotechnology2009 Dec1139-5020010597
Structural analysis of semi-specific oligosaccharide recognition by a cellulose-binding protein of thermotoga maritima reveals adaptations for functional diversification of the oligopeptide periplasmic binding protein fold.Cuneo, Matthew J; Beese, Lorena S; Hellinga, Homme WThe Journal of biological chemistry2009 Nov 2733217-2319801540
Isolation of antagonists of antigen-specific autoimmune T cell proliferation.Gocke, Anne R; Udugamasooriya, D Gomika; Archer, Chase T; Lee, Jiyong; Kodadek, ThomasChemistry & biology2009 Nov 251133-919942136
Identification and characterization of a small molecule inhibitor of formin-mediated actin assembly.Rizvi, Syed A; Neidt, Erin M; Cui, Jiayue; Feiger, Zach; Skau, Colleen T; Gardel, Margaret L; Kozmin, Sergey A; Kovar, David RChemistry & biology2009 Nov 251158-6819942139
Complementary electrical and spectroscopic detection assays with on-wire-lithography-based nanostructures.Zheng, Gengfeng; Chen, Xiaodong; Mirkin, Chad ASmall (Weinheim an der Bergstrasse, Germany)2009 Nov2537-4019697306
The many faces of repolarization instability: which one is prognostic?Shusterman, Vladimir; Lampert, Rachel; London, BarryJournal of electrocardiology2009 Nov-Dec511-619717165
SOX2 is an amplified lineage-survival oncogene in lung and esophageal squamous cell carcinomas.Bass, Adam J; Watanabe, Hideo; Mermel, Craig H; Yu, Soyoung; Perner, Sven; Verhaak, Roel G; Kim, So Young; Wardwell, Leslie; Tamayo, Pablo; Gat-Viks, Irit; Ramos, Alex H; Woo, Michele S; Weir, Barbara A; Getz, Gad; Beroukhim, Rameen; O'Kelly, Michael; DutNature genetics2009 Nov1238-4219801978
Regulating immune response using polyvalent nucleic acid-gold nanoparticle conjugates.Massich, Matthew D; Giljohann, David A; Seferos, Dwight S; Ludlow, Louise E; Horvath, Curt M; Mirkin, Chad AMolecular pharmaceutics2009 Nov-Dec1934-4019810673
Post-reductionist protein science, or putting Humpty Dumpty back together again.Gierasch, Lila M; Gershenson, AnneNature chemical biology2009 Nov774-719841622
Measuring the surface-enhanced Raman scattering enhancement factors of hot spots formed between an individual Ag nanowire and a single Ag nanocube.Camargo, Pedro H C; Cobley, Claire M; Rycenga, Matthew; Xia, YounanNanotechnology2009 Oct 2843402019801754
A Bayesian statistical analysis of behavioral facilitation associated with deep brain stimulation.Smith, Anne C; Shah, Sudhin A; Hudson, Andrew E; Purpura, Keith P; Victor, Jonathan D; Brown, Emery N; Schiff, Nicholas DJournal of neuroscience methods2009 Oct 15267-7619576932
Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses.Amit, Ido; Garber, Manuel; Chevrier, Nicolas; Leite, Ana Paula; Donner, Yoni; Eisenhaure, Thomas; Guttman, Mitchell; Grenier, Jennifer K; Li, Weibo; Zuk, Or; Schubert, Lisa A; Birditt, Brian; Shay, Tal; Goren, Alon; Zhang, Xiaolan; Smith, Zachary; DeeringScience (New York, N.Y.)2009 Oct 9257-6319729616
Translational and rotational diffusion of a small globular protein under crowded conditions.Li, Conggang; Wang, Yaqiang; Pielak, Gary JThe journal of physical chemistry. B2009 Oct 813390-219791823
Affective learning enhances activity and functional connectivity in early visual cortex.Damaraju, Eswar; Huang, Yang-Ming; Barrett, Lisa Feldman; Pessoa, LuizNeuropsychologia2009 Oct2480-719410587
Role of reactive oxygen species in antibiotic action and resistance.Dwyer, Daniel J; Kohanski, Michael A; Collins, James JCurrent opinion in microbiology2009 Oct482-919647477
Diagnostic change and the increased prevalence of autism.King, Marissa; Bearman, PeterInternational journal of epidemiology2009 Oct1224-3419737791
The importance of being earnestly selfish.Cheroutre, Hilde; Mucida, Daniel; Lambolez, FlorenceNature immunology2009 Oct1047-919767722
She's emotional. He's having a bad day: attributional explanations for emotion stereotypes.Barrett, Lisa Feldman; Bliss-Moreau, ElizaEmotion (Washington, D.C.)2009 Oct649-5819803587
Fabrication of Microbeads with a Controllable Hollow Interior and Porous Wall Using a Capillary Fluidic Device.Choi, Sung-Wook; Zhang, Yu; Xia, YounanAdvanced functional materials2009 Sep 232943-294920191106
A SERS study of the molecular structure of alkanethiol monolayers on Ag nanocubes in the presence of aqueous glucose.Rycenga, Matthew; McLellan, Joseph M; Xia, YounanChemical physics letters2009 Sep 22166-17120160847
19F NMR studies of alpha-synuclein conformation and fibrillation.Li, Conggang; Lutz, Evan A; Slade, Kristin M; Ruf, Rebecca A S; Wang, Gui-Fang; Pielak, Gary JBiochemistry2009 Sep 158578-8419655784
Endogenous nitric oxide protects bacteria against a wide spectrum of antibiotics.Gusarov, Ivan; Shatalin, Konstantin; Starodubtseva, Marina; Nudler, EvgenyScience (New York, N.Y.)2009 Sep 111380-419745150
STIM1 and calmodulin interact with Orai1 to induce Ca2+-dependent inactivation of CRAC channels.Mullins, Franklin M; Park, Chan Young; Dolmetsch, Ricardo E; Lewis, Richard SProceedings of the National Academy of Sciences of the United States of America2009 Sep 815495-50019706428
Water-soluble macrocycles synthesized via the weak-link approach.Wiester, Michael J; Mirkin, Chad AInorganic chemistry2009 Sep 78054-619637852
Estimated autism risk and older reproductive age.King, Marissa D; Fountain, Christine; Dakhlallah, Diana; Bearman, Peter SAmerican journal of public health2009 Sep1673-919608957
Aptamer nano-flares for molecular detection in living cells.Zheng, Dan; Seferos, Dwight S; Giljohann, David A; Patel, Pinal C; Mirkin, Chad ANano letters2009 Sep3258-6119645478
Hematopoietic development from human induced pluripotent stem cells.Lengerke, Claudia; Grauer, Matthias; Niebuhr, Nina I; Riedt, Tamara; Kanz, Lothar; Park, In-Hyun; Daley, George QAnnals of the New York Academy of Sciences2009 Sep219-2719796250
Production of Ag nanocubes on a scale of 0.1 g per batch by protecting the NaHS-mediated polyol synthesis with argon.Zhang, Qiang; Cobley, Claire; Au, Leslie; McKiernan, Maureen; Schwartz, Andrea; Wen, Long-Ping; Chen, Jingyi; Xia, YounanACS applied materials & interfaces2009 Sep2044-820305725
Generating coherent patterns of activity from chaotic neural networks.Sussillo, David; Abbott, L FNeuron2009 Aug 27544-5719709635
Nano-flares for mRNA regulation and detection.Prigodich, Andrew E; Seferos, Dwight S; Massich, Matthew D; Giljohann, David A; Lane, Brandon C; Mirkin, Chad AACS nano2009 Aug 252147-5219702321
SlipChip.Du, Wenbin; Li, Liang; Nichols, Kevin P; Ismagilov, Rustem FLab on a chip2009 Aug 212286-9219636458
A role for Lin28 in primordial germ-cell development and germ-cell malignancy.West, Jason A; Viswanathan, Srinivas R; Yabuuchi, Akiko; Cunniff, Kerianne; Takeuchi, Ayumu; Park, In-Hyun; Sero, Julia E; Zhu, Hao; Perez-Atayde, Antonio; Frazier, A Lindsay; Surani, M Azim; Daley, George QNature2009 Aug 13909-1319578360
Morphology and interaction between lipid domains.Ursell, Tristan S; Klug, William S; Phillips, RobProceedings of the National Academy of Sciences of the United States of America2009 Aug 1113301-619620730
Isolation, incubation, and parallel functional testing and identification by FISH of rare microbial single-copy cells from multi-species mixtures using the combination of chemistrode and stochastic confinement.Liu, Weishan; Kim, Hyun Jung; Lucchetta, Elena M; Du, Wenbin; Ismagilov, Rustem FLab on a chip2009 Aug 72153-6219606291
Modelling to contain pandemics.Epstein, Joshua MNature2009 Aug 668719661897
Colloidal hollow spheres of conducting polymers with smooth surface and uniform, controllable sizes.Bai, Meng-Yi; Cheng, Ya-Jian; Wickline, Samuel A; Xia, YounanSmall (Weinheim an der Bergstrasse, Germany)2009 Aug 31747-5219384880
Global discovery of adaptive mutations.Goodarzi, Hani; Hottes, Alison K; Tavazoie, SaeedNature methods2009 Aug581-319597501
Protein occupancy landscape of a bacterial genome.Vora, Tiffany; Hottes, Alison K; Tavazoie, SaeedMolecular cell2009 Jul 31247-5319647521
Trajectory approach to two-state kinetics of single particles on sculpted energy landscapes.Wu, David; Ghosh, Kingshuk; Inamdar, Mandar; Lee, Heun Jin; Fraser, Scott; Dill, Ken; Phillips, RobPhysical review letters2009 Jul 3105060319792475
Probing the surface-enhanced Raman scattering properties of Au-Ag nanocages at two different excitation wavelengths.Rycenga, Matthew; Hou, Kirk K; Cobley, Claire M; Schwartz, Andrea G; Camargo, Pedro H C; Xia, YounanPhysical chemistry chemical physics : PCCP2009 Jul 285903-819588011
Transcriptional regulatory circuits: predicting numbers from alphabets.Kim, Harold D; Shay, Tal; O'Shea, Erin K; Regev, AvivScience (New York, N.Y.)2009 Jul 24429-3219628860
Conductive Core-Sheath Nanofibers and Their Potential Application in Neural Tissue Engineering.Xie, Jingwei; Macewan, Matthew R; Willerth, Stephanie M; Li, Xiaoran; Moran, Daniel W; Sakiyama-Elbert, Shelly E; Xia, YounanAdvanced functional materials2009 Jul 242312-231819830261
Carborane-based pincers: synthesis and structure of SeBSe and SBS Pd(II) complexes.Spokoyny, Alexander M; Reuter, Matthew G; Stern, Charlotte L; Ratner, Mark A; Seideman, Tamar; Mirkin, Chad AJournal of the American Chemical Society2009 Jul 159482-319583431
Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression.Khalil, Ahmad M; Guttman, Mitchell; Huarte, Maite; Garber, Manuel; Raj, Arjun; Rivea Morales, Dianali; Thomas, Kelly; Presser, Aviva; Bernstein, Bradley E; van Oudenaarden, Alexander; Regev, Aviv; Lander, Eric S; Rinn, John LProceedings of the National Academy of Sciences of the United States of America2009 Jul 1411667-7219571010
Plasmonically controlled nucleic acid dehybridization with gold nanoprisms.Jones, Matthew R; Millstone, Jill E; Giljohann, David A; Seferos, Dwight S; Young, Kaylie L; Mirkin, Chad AChemphyschem : a European journal of chemical physics and physical chemistry2009 Jul 131461-519431161
Probing dynein and kinesin stepping with mechanical manipulation in a living cell.Sims, Peter A; Xie, X SunneyChemphyschem : a European journal of chemical physics and physical chemistry2009 Jul 131511-619504528
Bone-marrow adipocytes as negative regulators of the haematopoietic microenvironment.Naveiras, Olaia; Nardi, Valentina; Wenzel, Pamela L; Hauschka, Peter V; Fahey, Frederic; Daley, George QNature2009 Jul 9259-6319516257
In vivo profiles in malaria are consistent with a novel physiological state.Wirth, Dyann; Daily, Johanna; Winzeler, Elizabeth; Mesirov, Jill P; Regev, AvivProceedings of the National Academy of Sciences of the United States of America2009 Jul 7E70; author reply E71-219570993
Gene targeting of a disease-related gene in human induced pluripotent stem and embryonic stem cells.Zou, Jizhong; Maeder, Morgan L; Mali, Prashant; Pruett-Miller, Shondra M; Thibodeau-Beganny, Stacey; Chou, Bin-Kuan; Chen, Guibin; Ye, Zhaohui; Park, In-Hyun; Daley, George Q; Porteus, Matthew H; Joung, J Keith; Cheng, LinzhaoCell stem cell2009 Jul 297-11019540188
Assessment of autonomic control and respiratory sinus arrhythmia using point process models of human heart beat dynamics.Chen, Zhe; Brown, Emery N; Barbieri, RiccardoIEEE transactions on bio-medical engineering2009 Jul1791-80219272971
Discrete- and continuous-time probabilistic models and algorithms for inferring neuronal UP and DOWN states.Chen, Zhe; Vijayan, Sujith; Barbieri, Riccardo; Wilson, Matthew A; Brown, Emery NNeural computation2009 Jul1797-86219323637
Persistent systemic inflammation and atypical enterocolitis in patients with NEMO syndrome.Cheng, Laurence E; Kanwar, Bittoo; Tcheurekdjian, Haig; Grenert, James P; Muskat, Mica; Heyman, Melvin B; McCune, Joseph M; Wara, Diane WClinical immunology (Orlando, Fla.)2009 Jul124-3119375390
In-wire conversion of a metal nanorod segment into an organic semiconductor.Chen, Xiaodong; Zheng, Gengfeng; Cutler, Joshua I; Jang, Jae-Won; Mirkin, Chad ASmall (Weinheim an der Bergstrasse, Germany)2009 Jul1527-3019387988
Lin28 promotes transformation and is associated with advanced human malignancies.Viswanathan, Srinivas R; Powers, John T; Einhorn, William; Hoshida, Yujin; Ng, Tony L; Toffanin, Sara; O'Sullivan, Maureen; Lu, Jun; Phillips, Letha A; Lockhart, Victoria L; Shah, Samar P; Tanwar, Pradeep S; Mermel, Craig H; Beroukhim, Rameen; Azam, MohamNature genetics2009 Jul843-819483683
Nanofiber scaffolds with gradations in mineral content for mimicking the tendon-to-bone insertion site.Li, Xiaoran; Xie, Jingwei; Lipner, Justin; Yuan, Xiaoyan; Thomopoulos, Stavros; Xia, YounanNano letters2009 Jul2763-819537737
Epileptogenesis in the immature brain: emerging mechanisms.Rakhade, Sanjay N; Jensen, Frances ENature reviews. Neurology2009 Jul380-9119578345
The Future of Psychology: Connecting Mind to Brain.Barrett, Lisa FeldmanPerspectives on psychological science : a journal of the Association for Psychological Science2009 Jul 1326-33919844601
The molecular dating game: an antibody heavy chain hangs loose with a chaperone while waiting for its life partner.Hebert, Daniel N; Gierasch, Lila MMolecular cell2009 Jun 26635-619560414
Reduced amino acid alphabets exhibit an improved sensitivity and selectivity in fold assignment.Peterson, Eric L; Kondev, Jane; Theriot, Julie A; Phillips, RobBioinformatics (Oxford, England)2009 Jun 11356-6219351620
Valence focus and self-esteem lability: reacting to hedonic cues in the social environment.Pietromonaco, Paula R; Barrett, Lisa FeldmanEmotion (Washington, D.C.)2009 Jun406-1819485618
Structural adaptations that modulate monosaccharide, disaccharide, and trisaccharide specificities in periplasmic maltose-binding proteins.Cuneo, Matthew J; Changela, Anita; Beese, Lorena S; Hellinga, Homme WJournal of molecular biology2009 May 29157-6619361522
Synthetic gene networks that count.Friedland, Ari E; Lu, Timothy K; Wang, Xiao; Shi, David; Church, George; Collins, James JScience (New York, N.Y.)2009 May 291199-20219478183
Measuring the Optical Absorption Cross Sections of Au-Ag Nanocages and Au Nanorods by Photoacoustic Imaging.Cho, Eun Chul; Kim, Chulhong; Zhou, Fei; Cobley, Claire M; Song, Kwang Hyun; Chen, Jingyi; Li, Zhi-Yuhan; Wang, Lihong V; Xia, YounanThe journal of physical chemistry. C, Nanomaterials and interfaces2009 May 289023-902819680423
Neurite outgrowth on nanofiber scaffolds with different orders, structures, and surface properties.Xie, Jingwei; MacEwan, Matthew R; Li, Xiaoran; Sakiyama-Elbert, Shelly E; Xia, YounanACS nano2009 May 261151-919397333
High-frequency modification of plant genes using engineered zinc-finger nucleases.Townsend, Jeffrey A; Wright, David A; Winfrey, Ronnie J; Fu, Fengli; Maeder, Morgan L; Joung, J Keith; Voytas, Daniel FNature2009 May 21442-519404258
Emerging roles for lipids in shaping membrane-protein function.Phillips, Rob; Ursell, Tristan; Wiggins, Paul; Sens, PierreNature2009 May 21379-8519458714
See it with feeling: affective predictions during object perception.Barrett, L F; Bar, MoshePhilosophical transactions of the Royal Society of London. Series B, Biological sciences2009 May 121325-3419528014
High-throughput sequencing of the zebrafish antibody repertoire.Weinstein, Joshua A; Jiang, Ning; White 3rd, Richard A; Fisher, Daniel S; Quake, Stephen RScience (New York, N.Y.)2009 May 8807-1019423829
Transcriptome transfer produces a predictable cellular phenotype.Sul, Jai-Yoon; Wu, Chia-wen K; Zeng, Fanyi; Jochems, Jeanine; Lee, Miler T; Kim, Tae Kyung; Peritz, Tiina; Buckley, Peter; Cappelleri, David J; Maronski, Margaret; Kim, Minsun; Kumar, Vijay; Meaney, David; Kim, Junhyong; Eberwine, JamesProceedings of the National Academy of Sciences of the United States of America2009 May 57624-919380745
HCN hyperpolarization-activated cation channels inhibit EPSPs by interactions with M-type K(+) channels.George, Meena S; Abbott, L F; Siegelbaum, Steven ANature neuroscience2009 May577-8419363490
Diversity-based, model-guided construction of synthetic gene networks with predicted functions.Ellis, Tom; Wang, Xiao; Collins, James JNature biotechnology2009 May465-7119377462
Genetic dissection of an exogenously induced biofilm in laboratory and clinical isolates of E. coli.Amini, Sasan; Goodarzi, Hani; Tavazoie, SaeedPLoS pathogens2009 Maye100043219436718
Experience Sampling Methods: A Modern Idiographic Approach to Personality Research.Conner, Tamlin S; Tennen, Howard; Fleeson, William; Barrett, Lisa FeldmanSocial and personality psychology compass2009 May 1292-31319898679
Selective toxin sequestrants for the treatment of bacterial infections.Simpson, Levi S; Burdine, Lyle; Dutta, Amal K; Feranchak, Andrew P; Kodadek, ThomasJournal of the American Chemical Society2009 Apr 295760-219351156
Surface-enhanced Raman scattering: comparison of three different molecules on single-crystal nanocubes and nanospheres of silver.Rycenga, Matthew; Kim, Moon Ho; Camargo, Pedro H C; Cobley, Claire; Li, Zhi-Yuan; Xia, YounanThe journal of physical chemistry. A2009 Apr 233932-919175302
Optical properties of anisotropic core-shell pyramidal particles.Sweeney, Christina M; Hasan, Warefta; Nehl, Colleen L; Odom, Teri WThe journal of physical chemistry. A2009 Apr 234265-819290590
Chitosan-Based Inverse Opals: Three-Dimensional Scaffolds with Uniform Pore Structures for Cell Culture.Choi, Sung-Wook; Xie, Jingwei; Xia, YounanAdvanced materials (Deerfield Beach, Fla.)2009 Apr 152997-300119710950
Sending signals dynamically.Smock, Robert G; Gierasch, Lila MScience (New York, N.Y.)2009 Apr 10198-20319359576
Quantifying green fluorescent protein diffusion in Escherichia coli by using continuous photobleaching with evanescent illumination.Slade, Kristin M; Steele, Bridgett L; Pielak, Gary J; Thompson, Nancy LThe journal of physical chemistry. B2009 Apr 94837-4519296673
Preparation of uniform microspheres using a simple fluidic device and their crystallization into close-packed lattices.Choi, Sung-Wook; Cheong, In Woo; Kim, Jung-Hyun; Xia, YounanSmall (Weinheim an der Bergstrasse, Germany)2009 Apr454-919189332
Tailoring the structure of nanopyramids for optimal heat generation.Hasan, Warefta; Stender, Christopher L; Lee, Min Hyung; Nehl, Colleen L; Lee, JeunghoonNano letters2009 Apr1555-819271715
Proteoglycan interactions with Sonic Hedgehog specify mitogenic responses.Chan, Jennifer A; Balasubramanian, Srividya; Witt, Rochelle M; Nazemi, Kellie J; Choi, Yoojin; Pazyra-Murphy, Maria F; Walsh, Carolyn O; Thompson, Margaret; Segal, Rosalind ANature neuroscience2009 Apr409-1719287388
From brain formation to plasticity: insights on Otx2 homeoprotein.Sugiyama, Sayaka; Prochiantz, Alain; Hensch, Takao KDevelopment, growth & differentiation2009 Apr369-7719298552
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Homozygous missense N629D hERG (KCNH2) potassium channel mutation causes developmental defects in the right ventricle and its outflow tract and embryonic lethality.Teng, Guo Qi; Zhao, Xian; Lees-Miller, James P; Quinn, F Russell; Li, Pin; Rancourt, Derrick E; London, Barry; Cross, James C; Duff, Henry JCirculation research2008 Dec 51483-9118948620
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Tim-3 expression defines a novel population of dysfunctional T cells with highly elevated frequencies in progressive HIV-1 infection.Jones, R Brad; Ndhlovu, Lishomwa C; Barbour, Jason D; Sheth, Prameet M; Jha, Aashish R; Long, Brian R; Wong, Jessica C; Satkunarajah, Malathy; Schweneker, Marc; Chapman, Joan M; Gyenes, Gabor; Vali, Bahareh; Hyrcza, Martin D; Yue, Feng Yun; Kovacs, Colin;The Journal of experimental medicine2008 Nov 242763-7919001139
Structural analysis of a periplasmic binding protein in the tripartite ATP-independent transporter family reveals a tetrameric assembly that may have a role in ligand transport.Cuneo, Matthew J; Changela, Anita; Miklos, Aleksandr E; Beese, Lorena S; Krueger, Joanna K; Hellinga, Homme WThe Journal of biological chemistry2008 Nov 2132812-2018723845
Putting Electrospun Nanofibers to Work for Biomedical Research.Xie, Jingwei; Li, Xiaoran; Xia, YounanMacromolecular rapid communications2008 Nov 191775-179220011452
The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing.Dethlefsen, Les; Huse, Sue; Sogin, Mitchell L; Relman, David APLoS biology2008 Nov 18e28019018661
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Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing.Huse, Susan M; Dethlefsen, Les; Huber, Julie A; Mark Welch, David; Welch, David Mark; Relman, David A; Sogin, Mitchell LPLoS genetics2008 Nove100025519023400
Cross-strand split tetra-Cys motifs as structure sensors in a beta-sheet protein.Krishnan, Beena; Gierasch, Lila MChemistry & biology2008 Oct 201104-1518940670
A stochastic single-molecule event triggers phenotype switching of a bacterial cell.Choi, Paul J; Cai, Long; Frieda, Kirsten; Xie, X SunneyScience (New York, N.Y.)2008 Oct 17442-618927393
Surface plasmon-mediated energy transfer in heterogap Au-Ag nanowires.Wei, Wei; Li, Shuzhou; Qin, Lidong; Xue, Can; Millstone, Jill E; Xu, Xiaoyang; Schatz, George C; Mirkin, Chad ANano letters2008 Oct3446-918767888
Activation of tyrosine kinases by mutation of the gatekeeper threonine.Azam, Mohammad; Seeliger, Markus A; Gray, Nathanael S; Kuriyan, John; Daley, George QNature structural & molecular biology2008 Oct1109-1818794843
Membrane mechanics as a probe of ion-channel gating mechanisms.Reeves, Daniel; Ursell, Tristan; Sens, Pierre; Kondev, Jane; Phillips, RobPhysical review. E, Statistical, nonlinear, and soft matter physics2008 Oct04190118999449
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Disease-specific induced pluripotent stem cells.Park, In-Hyun; Arora, Natasha; Huo, Hongguang; Maherali, Nimet; Ahfeldt, Tim; Shimamura, Akiko; Lensch, M William; Cowan, Chad; Hochedlinger, Konrad; Daley, George QCell2008 Sep 5877-8618691744
Quantification of the benefit from integrating MEG and EEG data in minimum l2-norm estimation.Molins, A; Stufflebeam, S M; Brown, E N; Hamalainen, M SNeuroImage2008 Sep 11069-7718602485
Constructing emotion: the experience of fear as a conceptual act.Lindquist, Kristen A; Barrett, Lisa FeldmanPsychological science2008 Sep898-90318947355
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Functional grouping and cortical-subcortical interactions in emotion: a meta-analysis of neuroimaging studies.Kober, Hedy; Barrett, Lisa Feldman; Joseph, Josh; Bliss-Moreau, Eliza; Lindquist, Kristen; Wager, Tor DNeuroImage2008 Aug 15998-103118579414
Neural correlates of novelty and face-age effects in young and elderly adults.Wright, Christopher I; Negreira, Alyson; Gold, Andrea L; Britton, Jennifer C; Williams, Danielle; Barrett, Lisa FeldmanNeuroImage2008 Aug 15956-6818586522
Early alterations of AMPA receptors mediate synaptic potentiation induced by neonatal seizures.Rakhade, Sanjay N; Zhou, Chengwen; Aujla, Paven K; Fishman, Rachel; Sucher, Nikolaus J; Jensen, Frances EThe Journal of neuroscience : the official journal of the Society for Neuroscience2008 Aug 67979-9018685023
Brain correlates of autonomic modulation: combining heart rate variability with fMRI.Napadow, Vitaly; Dhond, Rupali; Conti, Giulia; Makris, Nikos; Brown, Emery N; Barbieri, RiccardoNeuroImage2008 Aug 1169-7718524629
Detecting bacteria and determining their susceptibility to antibiotics by stochastic confinement in nanoliter droplets using plug-based microfluidics.Boedicker, James Q; Li, Liang; Kline, Timothy R; Ismagilov, Rustem FLab on a chip2008 Aug1265-7218651067
Individual differences in learning the affective value of others under minimal conditions.Bliss-Moreau, Eliza; Barrett, Lisa Feldman; Wright, Christopher IEmotion (Washington, D.C.)2008 Aug479-9318729580
Motion processing streams in Drosophila are behaviorally specialized.Katsov, Alexander Y; Clandinin, Thomas RNeuron2008 Jul 31322-3518667159
Rapid "open-source" engineering of customized zinc-finger nucleases for highly efficient gene modification.Maeder, Morgan L; Thibodeau-Beganny, Stacey; Osiak, Anna; Wright, David A; Anthony, Reshma M; Eichtinger, Magdalena; Jiang, Tao; Foley, Jonathan E; Winfrey, Ronnie J; Townsend, Jeffrey A; Unger-Wallace, Erica; Sander, Jeffry D; Muller-Lerch, Felix; Fu, FeMolecular cell2008 Jul 25294-30118657511
Rett syndrome-causing mutations in human MeCP2 result in diverse structural changes that impact folding and DNA interactions.Ghosh, Rajarshi P; Horowitz-Scherer, Rachel A; Nikitina, Tatiana; Gierasch, Lila M; Woodcock, Christopher LThe Journal of biological chemistry2008 Jul 1820523-3418499664
Application of dynamic point process models to cardiovascular control.Barbieri, Riccardo; Brown, Emery NBio Systems2008 Jul-Aug120-518515000
Ras-MAPK signaling promotes trophectoderm formation from embryonic stem cells and mouse embryos.Lu, Chi-Wei; Yabuuchi, Akiko; Chen, Lingyi; Viswanathan, Srinivas; Kim, Kitai; Daley, George QNature genetics2008 Jul921-618536715
Zinc-finger nucleases: the next generation emerges.Cathomen, Toni; Joung, J KeithMolecular therapy : the journal of the American Society of Gene Therapy2008 Jul1200-718545224
A peptoid antagonist of VEGF receptor 2 recognizes a 'hotspot' in the extracellular domain distinct from the hormone-binding site.Udugamasooriya, D Gomika; Ritchie, Caroline; Brekken, Rolf A; Kodadek, ThomasBioorganic & medicinal chemistry2008 Jun 156338-4318501615
Central memory CD8+ T cells appear to have a shorter lifespan and reduced abundance as a function of HIV disease progression.Ladell, Kristin; Hellerstein, Marc K; Cesar, Denise; Busch, Robert; Boban, Drina; McCune, Joseph MJournal of immunology (Baltimore, Md. : 1950)2008 Jun 157907-1818523254
Predictive behavior within microbial genetic networks.Tagkopoulos, Ilias; Liu, Yir-Chung; Tavazoie, SaeedScience (New York, N.Y.)2008 Jun 61313-718467556
Delayed orexin signaling consolidates wakefulness and sleep: physiology and modeling.Diniz Behn, C G; Kopell, N; Brown, E N; Mochizuki, T; Scammell, T EJournal of neurophysiology2008 Jun3090-10318417630
High-throughput evaluation of relative cell permeability between peptoids and peptides.Tan, Niclas C; Yu, Peng; Kwon, Yong-Uk; Kodadek, ThomasBioorganic & medicinal chemistry2008 Jun 15853-6118490170
Residue-level interrogation of macromolecular crowding effects on protein stability.Charlton, Lisa M; Barnes, Christopher O; Li, Conggang; Orans, Jillian; Young, Gregory B; Pielak, Gary JJournal of the American Chemical Society2008 May 286826-3018459780
Differential dynamical effects of macromolecular crowding on an intrinsically disordered protein and a globular protein: implications for in-cell NMR spectroscopy.Li, Conggang; Charlton, Lisa M; Lakkavaram, Asha; Seagle, Christopher; Wang, Guifang; Young, Gregory B; Macdonald, Jeffrey M; Pielak, Gary JJournal of the American Chemical Society2008 May 216310-118419123
HIV-induced changes in T cell signaling pathways.Schweneker, Marc; Favre, David; Martin, Jeffrey N; Deeks, Steven G; McCune, Joseph MJournal of immunology (Baltimore, Md. : 1950)2008 May 156490-50018453567
Improving biomedical imaging with gold nanocages.Xia, Younan; Skrabalak, Sara ESPIE newsroom2008 May 121200705.113519704778
Bacterial nitric-oxide synthases operate without a dedicated redox partner.Gusarov, Ivan; Starodubtseva, Marina; Wang, Zhi-Qiang; McQuade, Lindsey; Lippard, Stephen J; Stuehr, Dennis J; Nudler, EvgenyThe Journal of biological chemistry2008 May 913140-718316370
Analysis of between-trial and within-trial neural spiking dynamics.Czanner, Gabriela; Eden, Uri T; Wirth, Sylvia; Yanike, Marianna; Suzuki, Wendy A; Brown, Emery NJournal of neurophysiology2008 May2672-9318216233
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Linking microbial phylogeny to metabolic activity at the single-cell level by using enhanced element labeling-catalyzed reporter deposition fluorescence in situ hybridization (EL-FISH) and NanoSIMS.Behrens, Sebastian; Losekann, Tina; Pett-Ridge, Jennifer; Weber, Peter K; Ng, Wing-On; Stevenson, Bradley S; Hutcheon, Ian D; Relman, David A; Spormann, Alfred MApplied and environmental microbiology2008 May3143-5018359832
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Growth hormone enhances thymic function in HIV-1-infected adults.Napolitano, Laura A; Schmidt, Diane; Gotway, Michael B; Ameli, Niloufar; Filbert, Erin L; Ng, Myra M; Clor, Julie L; Epling, Lorrie; Sinclair, Elizabeth; Baum, Paul D; Li, Kai; Killian, Marisela Lua; Bacchetti, Peter; McCune, Joseph MThe Journal of clinical investigation2008 Mar1085-9818292808
DNA-binding specificity is a major determinant of the activity and toxicity of zinc-finger nucleases.Cornu, Tatjana I; Thibodeau-Beganny, Stacey; Guhl, Eva; Alwin, Stephen; Eichtinger, Magdalena; Joung, J Keith; Joung, J K; Cathomen, ToniMolecular therapy : the journal of the American Society of Gene Therapy2008 Feb352-818026168
Phylogenetic fate mapping: theoretical and experimental studies applied to the development of mouse fibroblasts.Salipante, Stephen J; Thompson, James M; Horwitz, Marshall SGenetics2008 Feb967-7718245843
Tailoring the Optical and Catalytic Properties of Gold-Silver Nanoboxes and Nanocages by Introducing Palladium.Cobley, Claire M; Campbell, Dean J; Xia, YounanAdvanced materials (Deerfield Beach, Fla.)2008 Feb748-75218568091
Bacillus anthracis-derived nitric oxide is essential for pathogen virulence and survival in macrophages.Shatalin, Konstantin; Gusarov, Ivan; Avetissova, Ekaterina; Shatalina, Yelena; McQuade, Lindsey E; Lippard, Stephen J; Nudler, EvgenyProceedings of the National Academy of Sciences of the United States of America2008 Jan 221009-1318215992
High resolution traction force microscopy based on experimental and computational advances.Sabass, Benedikt; Gardel, Margaret L; Waterman, Clare M; Schwarz, Ulrich SBiophysical journal2008 Jan 1207-2017827246
In vivo imaging of mucosal CD4+ T cells using single photon emission computed tomography in a murine model of colitis.Kanwar, Bittoo; Gao, Dong Wei; Hwang, Andrew B; Grenert, James P; Williams, Simon P; Franc, Benjamin; McCune, Joseph MJournal of immunological methods2008 Jan 121-3017964595
Facile synthesis of gold nanoparticles with narrow size distribution by using AuCl or AuBr as the precursor.Lu, Xianmao; Tuan, Hsing-Yu; Korgel, Brian A; Xia, YounanChemistry (Weinheim an der Bergstrasse, Germany)20081584-9118058964
Relationship between T cell activation and CD4+ T cell count in HIV-seropositive individuals with undetectable plasma HIV RNA levels in the absence of therapy.Hunt, Peter W; Brenchley, Jason; Sinclair, Elizabeth; McCune, Joseph M; Roland, Michelle; Page-Shafer, Kimberly; Hsue, Priscilla; Emu, Brinda; Krone, Melissa; Lampiris, Harry; Douek, Daniel; Martin, Jeffrey N; Deeks, Steven GThe Journal of infectious diseases2008 Jan 1126-3318171295
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A Comparative Study of Galvanic Replacement Reactions Involving Ag Nanocubes and AuCl(2) or AuCl(4).Au, Leslie; Lu, Xianmao; Xia, YounanAdvanced materials (Deerfield Beach, Fla.)20082517-252218725963
Microbial prevalence, diversity and abundance in amniotic fluid during preterm labor: a molecular and culture-based investigation.DiGiulio, Daniel B; Romero, Roberto; Amogan, Harold P; Kusanovic, Juan Pedro; Bik, Elisabeth M; Gotsch, Francesca; Kim, Chong Jai; Erez, Offer; Edwin, Sam; Relman, David APloS one2008e305618725970
Morphological Evolution of Single-Crystal Ag Nanospheres during the Galvanic Replacement Reaction with HAuCl(4).Kim, Mun Ho; Lu, Xianmao; Wiley, Benjamin; Lee, Eric P; Xia, YounanThe journal of physical chemistry. C, Nanomaterials and interfaces20087872-787618787649
Dark-field microscopy studies of single metal nanoparticles: understanding the factors that influence the linewidth of the localized surface plasmon resonance.Hu, Min; Novo, Carolina; Funston, Alison; Wang, Haining; Staleva, Hristina; Zou, Shengli; Mulvaney, Paul; Xia, Younan; Hartland, Gregory VJournal of materials chemistry20081949-196018846243
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Topographically flat, chemically patterned PDMS stamps made by dip-pen nanolithography.Zheng, Zijian; Jang, Jae-Won; Zheng, Gengfeng; Mirkin, Chad AAngewandte Chemie (International ed. in English)20089951-419012308
Ligand-induced conformational changes in a thermophilic ribose-binding protein.Cuneo, Matthew J; Beese, Lorena S; Hellinga, Homme WBMC structural biology20085019019243
A new mechanism for aging: chemical "age spots" in immortal DNA strands in distributed stem cells.Sherley, James LBreast disease200837-4619029623
Coupled contagion dynamics of fear and disease: mathematical and computational explorations.Epstein, Joshua M; Parker, Jon; Cummings, Derek; Hammond, Ross APloS one2008e395519079607
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Instantaneous frequency and amplitude modulation of EEG in the hippocampus reveals state dependent temporal structure.Nguyen, David P; Barbieri, Riccardo; Wilson, Matthew A; Brown, Emery NConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20081711-519163009
Characterizing nonlinear heartbeat dynamics within a point process framework.Chen, Zhe; Brown, Emery N; Barbieri, RiccardoConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20082781-419163282
Assessment of hippocampal and autonomic neural activity by point process models.Barbieri, Riccardo; Chen, Zhe; Brown, Emery NConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference2008367919163509
Facile synthesis of tadpole-like nanostructures consisting of Au heads and Pd tails.Camargo, Pedro H C; Xiong, Yujie; Ji, Li; Zuo, Jian M; Xia, YounanJournal of the American Chemical Society2007 Dec 1915452-318027954
Nano-flares: probes for transfection and mRNA detection in living cells.Seferos, Dwight S; Giljohann, David A; Hill, Haley D; Prigodich, Andrew E; Mirkin, Chad AJournal of the American Chemical Society2007 Dec 1915477-918034495
In-cell aggregation of a polyglutamine-containing chimera is a multistep process initiated by the flanking sequence.Ignatova, Zoya; Thakur, Ashwani K; Wetzel, Ronald; Gierasch, Lila MThe Journal of biological chemistry2007 Dec 1436736-4317942400
Nonenzymatic detection of bacterial genomic DNA using the bio bar code assay.Hill, Haley D; Vega, Rafael A; Mirkin, Chad AAnalytical chemistry2007 Dec 19218-2317927207
Photoacoustic tomography of a rat cerebral cortex in vivo with au nanocages as an optical contrast agent.Yang, Xinmai; Skrabalak, Sara E; Li, Zhi-Yuan; Xia, Younan; Wang, Lihong VNano letters2007 Dec3798-80218020475
Nanodisk codes.Qin, Lidong; Banholzer, Matthew J; Millstone, Jill E; Mirkin, Chad ANano letters2007 Dec3849-5318041858
Versatile, fully automated, microfluidic cell culture system.Gomez-Sjoberg, Rafael; Leyrat, Anne A; Pirone, Dana M; Chen, Christopher S; Quake, Stephen RAnalytical chemistry2007 Nov 158557-6317953452
Periodate-triggered cross-linking reveals Sug2/Rpt4 as the molecular target of a peptoid inhibitor of the 19S proteasome regulatory particle.Lim, Hyun-Suk; Cai, Di; Archer, Chase T; Kodadek, ThomasJournal of the American Chemical Society2007 Oct 3112936-717929816
Neurotech for neuroscience: unifying concepts, organizing principles, and emerging tools.Silver, Rae; Boahen, Kwabena; Grillner, Sten; Kopell, Nancy; Olsen, Kathie LThe Journal of neuroscience : the official journal of the Society for Neuroscience2007 Oct 3111807-1917978017
Suppression of SIV-specific CD4+ T cells by infant but not adult macaque regulatory T cells: implications for SIV disease progression.Hartigan-O'Connor, Dennis J; Abel, Kristina; McCune, Joseph MThe Journal of experimental medicine2007 Oct 292679-9217954571
Gold Nanocages for Biomedical Applications.Skrabalak, Sara E; Chen, Jingyi; Au, Leslie; Lu, Xianmao; Li, Xingde; Xia, YounanAdvanced materials (Deerfield Beach, Fla.)2007 Oct 173177-318418648528
Structure-based design of robust glucose biosensors using a Thermotoga maritima periplasmic glucose-binding protein.Tian, Yaji; Cuneo, Matthew J; Changela, Anita; Hocker, Birte; Beese, Lorena S; Hellinga, Homme WProtein science : a publication of the Protein Society2007 Oct2240-5017766373
Gold nanocages for cancer detection and treatment.Skrabalak, Sara E; Au, Leslie; Lu, Xianmao; Li, Xingde; Xia, YounanNanomedicine (London, England)2007 Oct657-6817976028
Loss of T cell responses following long-term cryopreservation.Owen, Rachel E; Sinclair, Elizabeth; Emu, Brinda; Heitman, John W; Hirschkorn, Dale F; Epling, C Lorrie; Tan, Qi Xuan; Custer, Brian; Harris, Jeffery M; Jacobson, Mark A; McCune, Joseph M; Martin, Jeffery N; Hecht, Frederick M; Deeks, Steven G; Norris, PhJournal of immunological methods2007 Sep 3093-11517707394
Real-time observations of single bacteriophage lambda DNA ejections in vitro.Grayson, Paul; Han, Lin; Winther, Tabita; Phillips, RobProceedings of the National Academy of Sciences of the United States of America2007 Sep 1114652-717804798
Human alpha B-crystallin mutation causes oxido-reductive stress and protein aggregation cardiomyopathy in mice.Rajasekaran, Namakkal S; Connell, Patrice; Christians, Elisabeth S; Yan, Liang-Jun; Taylor, Ryan P; Orosz, Andras; Zhang, Xiu Q; Stevenson, Tamara J; Peshock, Ronald M; Leopold, Jane A; Barry, William H; Loscalzo, Joseph; Odelberg, Shannon J; Benjamin, IvCell2007 Aug 10427-3917693254
Microarray detection of duplex and triplex DNA binders with DNA-modified gold nanoparticles.Lytton-Jean, Abigail K R; Han, Min Su; Mirkin, Chad AAnalytical chemistry2007 Aug 16037-4117614366
Zinc Finger Targeter (ZiFiT): an engineered zinc finger/target site design tool.Sander, Jeffry D; Zaback, Peter; Joung, J Keith; Voytas, Daniel F; Dobbs, DrenaNucleic acids research2007 JulW599-60517526515
Silver nanoparticle-oligonucleotide conjugates based on DNA with triple cyclic disulfide moieties.Lee, Jae-Seung; Lytton-Jean, Abigail K R; Hurst, Sarah J; Mirkin, Chad ANano letters2007 Jul2112-517571909
Identification of a peptoid inhibitor of the proteasome 19S regulatory particle.Lim, Hyun-Suk; Archer, Chase T; Kodadek, ThomasJournal of the American Chemical Society2007 Jun 277750-117536803
Dynamic interconversion of amorphous microparticles and crystalline rods in salen-based homochiral infinite coordination polymers.Jeon, You-Moon; Heo, Jungseok; Mirkin, Chad AJournal of the American Chemical Society2007 Jun 207480-117523645
Fabrication of cubic nanocages and nanoframes by dealloying Au/Ag alloy nanoboxes with an aqueous etchant based on Fe(NO3)3 or NH4OH.Lu, Xianmao; Au, Leslie; McLellan, Joseph; Li, Zhi-Yuan; Marquez, Manuel; Xia, YounanNano letters2007 Jun1764-917489641
Probing transcription factor dynamics at the single-molecule level in a living cell.Elf, Johan; Li, Gene-Wei; Xie, X SunneyScience (New York, N.Y.)2007 May 251191-417525339
Antiviral antibodies are necessary for control of simian immunodeficiency virus replication.Miller, Christopher J; Genesca, Meritxell; Abel, Kristina; Montefiori, David; Forthal, Donald; Bost, Kristen; Li, Jun; Favre, David; McCune, Joseph MJournal of virology2007 May5024-3517329327
Immuno gold nanocages with tailored optical properties for targeted photothermal destruction of cancer cells.Chen, Jingyi; Wang, Danling; Xi, Jiefeng; Au, Leslie; Siekkinen, Andy; Warsen, Addie; Li, Zhi-Yuan; Zhang, Hui; Xia, Younan; Li, XingdeNano letters2007 May1318-2217430005
Cooperative gating and spatial organization of membrane proteins through elastic interactions.Ursell, Tristan; Huang, Kerwyn Casey; Peterson, Eric; Phillips, RobPLoS computational biology2007 Maye8117480116
Vibrational response of Au-Ag nanoboxes and nanocages to ultrafast laser-induced heating.Petrova, Hristina; Lin, Chien-Hua; Hu, Min; Chen, Jingyi; Siekkinen, Andrew R; Xia, Younan; Sader, John E; Hartland, Gregory VNano letters2007 Apr1059-6317358093
Measuring flux distributions for diffusion in the small-numbers limit.Seitaridou, Effrosyni; Inamdar, Mandar M; Phillips, Rob; Ghosh, Kingshuk; Dill, KenThe journal of physical chemistry. B2007 Mar 82288-9217295536
Protein fabrication automation.Cox, J Colin; Lape, Janel; Sayed, Mahmood A; Hellinga, Homme WProtein science : a publication of the Protein Society2007 Mar379-9017242375
Local encoding of computationally designed enzyme activity.Allert, Malin; Dwyer, Mary A; Hellinga, Homme WJournal of molecular biology2007 Feb 23945-5317196220
Biological consequences of tightly bent DNA: the other life of a macromolecular celebrity.Garcia, Hernan G; Grayson, Paul; Han, Lin; Inamdar, Mandar; Kondev, Jane; Nelson, Philip C; Phillips, Rob; Widom, Jonathan; Wiggins, Paul ABiopolymers2007 Feb 5115-3017103419
Human CD4+ regulatory T cells express lower levels of the IL-7 receptor alpha chain (CD127), allowing consistent identification and sorting of live cells.Hartigan-O'Connor, Dennis J; Poon, Chungkee; Sinclair, Elizabeth; McCune, Joseph MJournal of immunological methods2007 Jan 3041-5217173927
From the test tube to the cell: exploring the folding and aggregation of a beta-clam protein.Ignatova, Zoya; Krishnan, Beena; Bombardier, Jeffrey P; Marcelino, Anna Marie C; Hong, Jiang; Gierasch, Lila MBiopolymers2007157-6317206628
Site-specific fluorescent labeling of poly-histidine sequences using a metal-chelating cysteine.Krishnan, Beena; Szymanska, Aneta; Gierasch, Lila MChemical biology & drug design2007 Jan31-4017313455
Profiling the DNA-binding specificities of engineered Cys2His2 zinc finger domains using a rapid cell-based method.Meng, Xiangdong; Thibodeau-Beganny, Stacey; Jiang, Tao; Joung, J Keith; Wolfe, Scot ANucleic acids research2007e8117537811
Facile synthesis of Ag nanocubes and Au nanocages.Skrabalak, Sara E; Au, Leslie; Li, Xingde; Xia, YounanNature protocols20072182-9017853874
Effects of osmolytes on protein folding and aggregation in cells.Ignatova, Zoya; Gierasch, Lila MMethods in enzymology2007355-7217875429
Engineering Cys2His2 zinc finger domains using a bacterial cell-based two-hybrid selection system.Thibodeau-Beganny, Stacey; Joung, J KeithMethods in molecular biology (Clifton, N.J.)2007317-3418314590
Correlated Rayleigh Scattering Spectroscopy and Scanning Electron Microscopy Studies of Au-Ag Bimetallic Nanoboxes and Nanocages.Hu, Min; Chen, Jingyi; Marquez, Manuel; Xia, Younan; Hartland, Gregory VThe journal of physical chemistry. C, Nanomaterials and interfaces200712558-1256518629346
The bacterial two-hybrid system as a reporter system for analyzing protein-protein interactions.Giesecke, Astrid V; Joung, J KeithCSH protocols2007pdb.prot467221357036
Supramolecular allosteric cofacial porphyrin complexes.Oliveri, Christopher G; Gianneschi, Nathan C; Nguyen, SonBinh T; Mirkin, Chad A; Stern, Charlotte L; Wawrzak, Zdzislaw; Pink, MarenJournal of the American Chemical Society2006 Dec 2016286-9617165783
Maximizing DNA loading on a range of gold nanoparticle sizes.Hurst, Sarah J; Lytton-Jean, Abigail K R; Mirkin, Chad AAnalytical chemistry2006 Dec 158313-817165821
Increased carotid intima-media thickness in HIV patients is associated with increased cytomegalovirus-specific T-cell responses.Hsue, Priscilla Y; Hunt, Peter W; Sinclair, Elizabeth; Bredt, Barry; Franklin, Arlana; Killian, Maudi; Hoh, Rebecca; Martin, Jeffrey N; McCune, Joseph M; Waters, David D; Deeks, Steven GAIDS (London, England)2006 Nov 282275-8317117013
Direct measurement of T-cell receptor repertoire diversity with AmpliCot.Baum, Paul D; McCune, Joseph MNature methods2006 Nov895-90117060913
Dip-pen nanolithography of high-melting-temperature molecules.Huang, Ling; Chang, Yu-Hsu; Kakkassery, Joseph J; Mirkin, Chad AThe journal of physical chemistry. B2006 Oct 2620756-817048882
Prevalence of CXCR4 tropism among antiretroviral-treated HIV-1-infected patients with detectable viremia.Hunt, Peter W; Harrigan, P Richard; Huang, Wei; Bates, Michael; Williamson, David W; McCune, Joseph M; Price, Richard W; Spudich, Serena S; Lampiris, Harry; Hoh, Rebecca; Leigler, Teri; Martin, Jeffrey N; Deeks, Steven GThe Journal of infectious diseases2006 Oct 1926-3016960780
Cytotrophoblast induction of arterial apoptosis and lymphangiogenesis in an in vivo model of human placentation.Red-Horse, Kristy; Rivera, Jose; Schanz, Andrea; Zhou, Yan; Winn, Virginia; Kapidzic, Mirhan; Maltepe, Emin; Okazaki, Kelly; Kochman, Ronit; Vo, Kim Chi; Giudice, Linda; Erlebacher, Adrian; McCune, Joseph M; Stoddart, Cheryl A; Fisher, Susan JThe Journal of clinical investigation2006 Oct2643-5216998586
The crystal structure of a thermophilic glucose binding protein reveals adaptations that interconvert mono and di-saccharide binding sites.Cuneo, Matthew J; Changela, Anita; Warren, Joshua J; Beese, Lorena S; Hellinga, Homme WJournal of molecular biology2006 Sep 15259-7016904687
Separation of tricomponent protein mixtures with triblock nanorods.Oh, Byung-Keun; Park, Sungho; Millstone, Jill E; Lee, Seung Woo; Lee, Ki-Bum; Mirkin, Chad AJournal of the American Chemical Society2006 Sep 1311825-916953622
Binding and signaling of surface-immobilized reagentless fluorescent biosensors derived from periplasmic binding proteins.de Lorimier, Robert M; Tian, Yaji; Hellinga, Homme WProtein science : a publication of the Protein Society2006 Aug1936-4416823040
Asymmetric functionalization of gold nanoparticles with oligonucleotides.Xu, Xiaoyang; Rosi, Nathaniel L; Wang, Yuhuang; Huo, Fengwei; Mirkin, Chad AJournal of the American Chemical Society2006 Jul 269286-716848436
Dynamics of DNA ejection from bacteriophage.Inamdar, Mandar M; Gelbart, William M; Phillips, RobBiophysical journal2006 Jul 15411-2016679360
Identification of cognate ligands for the Escherichia coli phnD protein product and engineering of a reagentless fluorescent biosensor for phosphonates.Rizk, Shahir S; Cuneo, Matthew J; Hellinga, Homme WProtein science : a publication of the Protein Society2006 Jul1745-5116751609
Enhanced signals and fast nucleic acid hybridization by microfluidic chaotic mixing.Liu, Jian; Williams, Brian A; Gwirtz, Richele M; Wold, Barbara J; Quake, StephenAngewandte Chemie (International ed. in English)2006 May 263618-2316639763
Triple-Decker Complexes Formed via the Weak Link Approach.Jeon, You-Moon; Heo, Jungseok; Brown, Aaron M; Mirkin, Chad AOrganometallics2006 May 222729-273219060957
Regulation of T cell responses in the developing human fetus.Michaelsson, Jakob; Mold, Jeff E; McCune, Joseph M; Nixon, Douglas FJournal of immunology (Baltimore, Md. : 1950)2006 May 155741-816670279
The effect of genome length on ejection forces in bacteriophage lambda.Grayson, Paul; Evilevitch, Alex; Inamdar, Mandar M; Purohit, Prashant K; Gelbart, William M; Knobler, Charles M; Phillips, RobVirology2006 May 10430-616469346
A gold nanoparticle based approach for screening triplex DNA binders.Han, Min Su; Lytton-Jean, Abigail K R; Mirkin, Chad AJournal of the American Chemical Society2006 Apr 194954-516608320
Volume-exclusion effects in tethered-particle experiments: bead size matters.Segall, Darren E; Nelson, Philip C; Phillips, RobPhysical review letters2006 Mar 308830616606235
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Counter-selectable marker for bacterial-based interaction trap systems.Meng, Xiangdong; Smith, Robin M; Giesecke, Astrid V; Joung, J Keith; Wolfe, Scot ABioTechniques2006 Feb179-8416526407
Teaching the principles of statistical dynamics.Ghosh, Kingshuk; Dill, Ken A; Inamdar, Mandar M; Seitaridou, Effrosyni; Phillips, RobAmerican journal of physics2006 Feb 1123-13323585693
Synthetic protein-protein interaction domains created by shuffling Cys2His2 zinc-fingers.Giesecke, Astrid V; Fang, Rui; Joung, J KeithMolecular systems biology20062006.201116732192
Standardized reagents and protocols for engineering zinc finger nucleases by modular assembly.Wright, David A; Thibodeau-Beganny, Stacey; Sander, Jeffry D; Winfrey, Ronnie J; Hirsh, Andrew S; Eichtinger, Magdalena; Fu, Fengli; Porteus, Matthew H; Dobbs, Drena; Voytas, Daniel F; Joung, J KeithNature protocols20061637-5217406455
Repression of phase-variable cup gene expression by H-NS-like proteins in Pseudomonas aeruginosa.Vallet-Gely, Isabelle; Donovan, Katherine E; Fang, Rui; Joung, J Keith; Dove, Simon LProceedings of the National Academy of Sciences of the United States of America2005 Aug 211082-716043713
A combined yeast/bacteria two-hybrid system: development and evaluation.Serebriiskii, Ilya G; Fang, Rui; Latypova, Ekaterina; Hopkins, Richard; Vinson, Charles; Joung, J Keith; Golemis, Erica AMolecular & cellular proteomics : MCP2005 Jun819-2615781424
Transcriptional regulation by the numbers: models.Bintu, Lacramioara; Buchler, Nicolas E; Garcia, Hernan G; Gerland, Ulrich; Hwa, Terence; Kondev, Jane; Phillips, RobCurrent opinion in genetics & development2005 Apr116-2415797194
Transcriptional regulation by the numbers: applications.Bintu, Lacramioara; Buchler, Nicolas E; Garcia, Hernan G; Gerland, Ulrich; Hwa, Terence; Kondev, Jane; Kuhlman, Thomas; Phillips, RobCurrent opinion in genetics & development2005 Apr125-3515797195
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