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Publication TitleAuthorsJournalPublication DatePage NoPubMedID
Intravenous immune globulin suppresses angiogenesis in mice and humans.Yasuma, Reo; Cicatiello, Valeria; Mizutani, Takeshi; Tudisco, Laura; Kim, Younghee; Tarallo, Valeria; Bogdanovich, Sasha; Hirano, Yoshio; Kerur, Nagaraj; Li, Shengjian; Yasuma, Tetsuhiro; Fowler, Benjamin J; Wright, Charles B; Apicella, Ivana; Greco, Adelaide; Brunetti, Arturo; Ambati, Balamurali K; Helmers, Sevim Barbasso; Lundberg, Ingrid E; Viklicky, Ondrej; Leusen, Jeanette Hw; Verbeek, J Sjef; Gelfand, Bradley D; Bastos-Carvalho, Ana; De Falco, Sandro; Ambati, JayakrishnaSignal transduction and targeted therapy.2016;26925256
Human IgG1 antibodies suppress angiogenesis in a target-independent manner.Bogdanovich, Sasha; Kim, Younghee; Mizutani, Takeshi; Yasuma, Reo; Tudisco, Laura; Cicatiello, Valeria; Bastos-Carvalho, Ana; Kerur, Nagaraj; Hirano, Yoshio; Baffi, Judit Z; Tarallo, Valeria; Li, Shengjian; Yasuma, Tetsuhiro; Arpitha, Parthasarathy; Fowler, Benjamin J; Wright, Charles B; Apicella, Ivana; Greco, Adelaide; Brunetti, Arturo; Ruvo, Menotti; Sandomenico, Annamaria; Nozaki, Miho; Ijima, Ryo; Kaneko, Hiroki; Ogura, Yuichiro; Terasaki, Hiroko; Ambati, Balamurali K; Leusen, Jeanette Hw; Langdon, Wallace Y; Clark, Michael R; Armour, Kathryn L; Bruhns, Pierre; Verbeek, J Sjef; Gelfand, Bradley D; De Falco, Sandro; Ambati, JayakrishnaSignal transduction and targeted therapy.2016;26918197
Quantitative Multiscale Cell Imaging in Controlled 3D Microenvironments.Welf, Erik S; Driscoll, Meghan K; Dean, Kevin M; Schäfer, Claudia; Chu, Jun; Davidson, Michael W; Lin, Michael Z; Danuser, Gaudenz; Fiolka, RetoDevelopmental cell.2016 Feb 22;462-7526906741
Probing the Complexities of Astrocyte Calcium Signaling.Shigetomi, Eiji; Patel, Sandip; Khakh, Baljit STrends in cell biology.2016 Feb 16;26896246
Membrane Potential Dynamics of CA1 Pyramidal Neurons during Hippocampal Ripples in Awake Mice.Hulse, Brad K; Moreaux, Laurent C; Lubenov, Evgueniy V; Siapas, Athanassios GNeuron.2016 Feb 17;800-1326889811
Cytosolic NADH-NAD+ redox visualized in brain slices by two-photon fluorescence lifetime biosensor imaging.Mongeon, Rebecca; Venkatachalam, Veena; Yellen, GaryAntioxidants & redox signaling.2016 Feb 9;26857245
Saccharomyces cerevisiae as a tool for mining, studying and engineering fungal polyketide synthases.Bond, Carly; Tang, Yi; Li, LiFungal genetics and biology : FG & B.2016 Feb 2;26850128
Computational models of heart disease.Smith, Nic; Trayanova, NataliaDrug discovery today. Disease models.2014;2-Jan26843884
Neural Circuits Underlying Visually Evoked Escapes in Larval Zebrafish.Dunn, Timothy W; Gebhardt, Christoph; Naumann, Eva A; Riegler, Clemens; Ahrens, Misha B; Engert, Florian; Del Bene, FilippoNeuron.2016 Feb 3;613-2826804997
Whole-brain activity mapping onto a zebrafish brain atlas.Randlett, Owen; Wee, Caroline L; Naumann, Eva A; Nnaemeka, Onyeka; Schoppik, David; Fitzgerald, James E; Portugues, Ruben; Lacoste, Alix M B; Riegler, Clemens; Engert, Florian; Schier, Alexander FNature methods.2015 Nov;1039-4626778924
Simultaneous Multi-plane Imaging of Neural Circuits.Yang, Weijian; Miller, Jae-Eun Kang; Carrillo-Reid, Luis; Pnevmatikakis, Eftychios; Paninski, Liam; Yuste, Rafael; Peterka, Darcy SNeuron.2016 Jan 20;269-8426774159
Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin.Snyder, Matthew W; Kircher, Martin; Hill, Andrew J; Daza, Riza M; Shendure, JayCell.2016 Jan 14;57-6826771485
Identification and Optimization of Anthranilic Acid Based Inhibitors of Replication Protein?A.Patrone, James D; Pelz, Nicholas F; Bates, Brittney S; Souza-Fagundes, Elaine M; Vangamudi, Bhavatarini; Camper, Demarco V; Kuznetsov, Alexey G; Browning, Carrie F; Feldkamp, Michael D; Frank, Andreas O; Gilston, Benjamin A; Olejniczak, Edward T; Rossanese, Olivia W; Waterson, Alex G; Chazin, Walter J; Fesik, Stephen WChemMedChem.2016 Jan 8;26748787
Rate-dependent force, intracellular calcium, and action potential voltage alternans are modulated by sarcomere length and heart failure induced-remodeling of thin filament regulation in human heart failure: A myocyte modeling study.Zile, Melanie A; Trayanova, Natalia AProgress in biophysics and molecular biology.2015 Dec 25;26724571
Close-Packed Silicon Microelectrodes for Scalable Spatially Oversampled Neural Recording.Scholvin, Jorg; Kinney, Justin P; Bernstein, Jacob G; Moore-Kochlacs, Caroline; Kopell, Nancy; Fonstad, Clifton G; Boyden, Edward SIEEE transactions on bio-medical engineering.2016 Jan;120-3026699649
The structure and timescales of heat perception in larval zebrafish.Haesemeyer, Martin; Robson, Drew N; Li, Jennifer M; Schier, Alexander F; Engert, FlorianCell systems.2015 Nov 25;338-34826640823
The African Turquoise Killifish Genome Provides Insights into Evolution and Genetic Architecture of Lifespan.Valenzano, Dario Riccardo; Benayoun, Bérénice A; Singh, Param Priya; Zhang, Elisa; Etter, Paul D; Hu, Chi-Kuo; Clément-Ziza, Mathieu; Willemsen, David; Cui, Rongfeng; Harel, Itamar; Machado, Ben E; Yee, Muh-Ching; Sharp, Sabrina C; Bustamante, Carlos D; Beyer, Andreas; Johnson, Eric A; Brunet, AnneCell.2015 Dec 3;1539-5426638078
Image-based Reconstruction of 3D Myocardial Infarct Geometry for Patient Specific Applications.Ukwatta, Eranga; Rajchl, Martin; White, James; Pashakhanloo, Farhad; Herzka, Daniel A; McVeigh, Elliot; Lardo, Albert C; Trayanova, Natalia; Vadakkumpadan, FijoyProceedings of SPIE--the International Society for Optical Engineering.2015 Feb 21;26633913
Rationally engineered Cas9 nucleases with improved specificity.Slaymaker, Ian M; Gao, Linyi; Zetsche, Bernd; Scott, David A; Yan, Winston X; Zhang, FengScience (New York, N.Y.).2016 Jan 1;84-826628643
Principles of connectivity among morphologically defined cell types in adult neocortex.Jiang, Xiaolong; Shen, Shan; Cadwell, Cathryn R; Berens, Philipp; Sinz, Fabian; Ecker, Alexander S; Patel, Saumil; Tolias, Andreas SScience (New York, N.Y.).2015 Nov 27;aac946226612957
Controlling AAV Tropism in the Nervous System with Natural and Engineered Capsids.Castle, Michael J; Turunen, Heikki T; Vandenberghe, Luk H; Wolfe, John HMethods in molecular biology (Clifton, N.J.).2016;133-4926611584
Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems.Shmakov, Sergey; Abudayyeh, Omar O; Makarova, Kira S; Wolf, Yuri I; Gootenberg, Jonathan S; Semenova, Ekaterina; Minakhin, Leonid; Joung, Julia; Konermann, Silvana; Severinov, Konstantin; Zhang, Feng; Koonin, Eugene VMolecular cell.2015 Nov 5;385-9726593719
Theory in Biology: Figure 1 or Figure 7?Phillips, RobTrends in cell biology.2015 Dec;723-926584768
Bactericidal Antibiotics Induce Toxic Metabolic Perturbations that Lead to Cellular Damage.Belenky, Peter; Ye, Jonathan D; Porter, Caroline B M; Cohen, Nadia R; Lobritz, Michael A; Ferrante, Thomas; Jain, Saloni; Korry, Benjamin J; Schwarz, Eric G; Walker, Graham C; Collins, James JCell reports.2015 Nov 3;968-8026565910
Defining Resistance and Tolerance to Cancer.Dillman, Adler R; Schneider, David SCell reports.2015 Nov 3;884-726565901
Variation in Taxonomic Composition of the Fecal Microbiota in an Inbred Mouse Strain across Individuals and Time.Hoy, Yana Emmy; Bik, Elisabeth M; Lawley, Trevor D; Holmes, Susan P; Monack, Denise M; Theriot, Julie A; Relman, David APloS one.2015;e014282526565698
Multiscale photoacoustic tomography using reversibly switchable bacterial phytochrome as a near-infrared photochromic probe.Yao, Junjie; Kaberniuk, Andrii A; Li, Lei; Shcherbakova, Daria M; Zhang, Ruiying; Wang, Lidai; Li, Guo; Verkhusha, Vladislav V; Wang, Lihong VNature methods.2016 Jan;67-7326550774
Convergence and Stability of a Class of Iteratively Re-weighted Least Squares Algorithms for Sparse Signal Recovery in the Presence of Noise.Babadi, Behtash; Ba, Demba; Purdon, Patrick L; Brown, Emery NIEEE transactions on signal processing : a publication of the IEEE Signal Processing Society.2013 Oct 30;183-19526549965
Convergent evolution of marine mammals is associated with distinct substitutions in common genes.Zhou, Xuming; Seim, Inge; Gladyshev, Vadim NScientific reports.2015;1655026549748
Organization of the Mammalian Ionome According to Organ Origin, Lineage Specialization, and Longevity.Ma, Siming; Lee, Sang-Goo; Kim, Eun Bae; Park, Thomas J; Seluanov, Andrei; Gorbunova, Vera; Buffenstein, Rochelle; Seravalli, Javier; Gladyshev, Vadim NCell reports.2015 Nov 17;1319-2626549444
Broadening the targeting range of Staphylococcus aureus CRISPR-Cas9 by modifying PAM recognition.Kleinstiver, Benjamin P; Prew, Michelle S; Tsai, Shengdar Q; Nguyen, Nhu T; Topkar, Ved V; Zheng, Zongli; Joung, J KeithNature biotechnology.2015 Dec;1293-129826524662
Fixed single-cell transcriptomic characterization of human radial glial diversity.Thomsen, Elliot R; Mich, John K; Yao, Zizhen; Hodge, Rebecca D; Doyle, Adele M; Jang, Sumin; Shehata, Soraya I; Nelson, Angelique M; Shapovalova, Nadiya V; Levi, Boaz P; Ramanathan, SharadNature methods.2016 Jan;87-9326524239
Cuffing-based photoacoustic flowmetry in humans in the optical diffusive regime.Zhou, Yong; Liang, Jinyang; Wang, Lihong VJournal of biophotonics.2016 Mar;208-1226515158
Dual-Modality Photoacoustic and Ultrasound Imaging System for Noninvasive Sentinel Lymph Node Detection in Patients with Breast Cancer.Garcia-Uribe, Alejandro; Erpelding, Todd N; Krumholz, Arie; Ke, Haixin; Maslov, Konstantin; Appleton, Catherine; Margenthaler, Julie A; Wang, Lihong VScientific reports.2015;1574826510774
Encrypted Three-dimensional Dynamic Imaging using Snapshot Time-of-flight Compressed Ultrafast Photography.Liang, Jinyang; Gao, Liang; Hai, Pengfei; Li, Chiye; Wang, Lihong VScientific reports.2015;1550426503834
Can Sibling Sex Ratios Be Used as a Valid Test for the Prenatal Androgen Hypothesis of Autism Spectrum Disorders?Cheslack-Postava, Keely; Susser, Ezra; Liu, Kayuet; Bearman, Peter SPloS one.2015;e014133826495967
Efficient delivery of nuclease proteins for genome editing in human stem cells and primary cells.Liu, Jia; Gaj, Thomas; Yang, Yifeng; Wang, Nan; Shui, Sailan; Kim, Sojung; Kanchiswamy, Chidananda Nagamangala; Kim, Jin-Soo; Barbas 3rd, Carlos FNature protocols.2015 Nov;1842-5926492140
Poreless eggshells.Lin, Haifan; Matzuk, Martin MThe Journal of clinical investigation.2015 Nov 2;4005-726485282
Seeing Through the Surface: Non-invasive Characterization of Biomaterial-Tissue Interactions Using Photoacoustic Microscopy.Zhang, Yu Shrike; Wang, Lihong V; Xia, YounanAnnals of biomedical engineering.2015 Oct 15;26471785
Discovery of Unclustered Fungal Indole Diterpene Biosynthetic Pathways through Combinatorial Pathway Reassembly in Engineered Yeast.Tang, Man-Cheng; Lin, Hsiao-Ching; Li, Dehai; Zou, Yi; Li, Jian; Xu, Wei; Cacho, Ralph A; Hillenmeyer, Maureen E; Garg, Neil K; Tang, YiJournal of the American Chemical Society.2015 Nov 4;13724-726469304
On the problem of boundaries and scaling for urban street networks.Masucci, A Paolo; Arcaute, Elsa; Hatna, Erez; Stanilov, Kiril; Batty, MichaelJournal of the Royal Society, Interface / the Royal Society.2015 Oct 6;2015076326468071
Common variants in DRD2 are associated with sleep duration: the CARe consortium.Cade, Brian E; Gottlieb, Daniel J; Lauderdale, Diane S; Bennett, David A; Buchman, Aron S; Buxbaum, Sarah G; De Jager, Philip L; Evans, Daniel S; Fülöp, Tibor; Gharib, Sina A; Johnson, W Craig; Kim, Hyun; Larkin, Emma K; Lee, Seung Ku; Lim, Andrew S; Punjabi, Naresh M; Shin, Chol; Stone, Katie L; Tranah, Gregory J; Weng, Jia; Yaffe, Kristine; Zee, Phyllis C; Patel, Sanjay R; Zhu, Xiaofeng; Redline, Susan; Saxena, RichaHuman molecular genetics.2016 Jan 1;167-7926464489
The molecular constituents of the blood-brain barrier.Chow, Brian Wai; Gu, ChenghuaTrends in neurosciences.2015 Oct;598-60826442694
Lipid Profiles and Signals for Long Life.Schroeder, Elizabeth A; Brunet, AnneTrends in endocrinology and metabolism: TEM.2015 Nov;589-9226439976
Orthogonal gene knockout and activation with a catalytically active Cas9 nuclease.Dahlman, James E; Abudayyeh, Omar O; Joung, Julia; Gootenberg, Jonathan S; Zhang, Feng; Konermann, SilvanaNature biotechnology.2015 Nov;1159-6126436575
Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system.Zetsche, Bernd; Gootenberg, Jonathan S; Abudayyeh, Omar O; Slaymaker, Ian M; Makarova, Kira S; Essletzbichler, Patrick; Volz, Sara E; Joung, Julia; van der Oost, John; Regev, Aviv; Koonin, Eugene V; Zhang, FengCell.2015 Oct 22;759-7126422227
Cardioprotective Actions of TGF?RI Inhibition Through Stimulating Autocrine/Paracrine of Survivin and Inhibiting Wnt in Cardiac Progenitors.Ho, Yu-Sian; Tsai, Wan-Hsuan; Lin, Fen-Chiung; Huang, Wei-Pang; Lin, Lung-Chun; Wu, Sean M; Liu, Yu-Ru; Chen, Wen-PinStem cells (Dayton, Ohio).2015 Sep 29;26418219
Continuous Antigenic Stimulation of DO11.10 TCR Transgenic Mice in the Presence or Absence of IL-1?: Possible Implications for Mechanisms of T Cell Depletion in HIV Disease.Ladell, Kristin; Hazenberg, Mette D; Fitch, Mark; Emson, Claire; McEvoy-Hein Asgarian, Bridget K; Mold, Jeff E; Miller, Corey; Busch, Robert; Price, David A; Hellerstein, Marc K; McCune, Joseph MJournal of immunology (Baltimore, Md. : 1950).2015 Nov 1;4096-10526416271
In Vivo Evaluation of Adipose-Derived Stromal Cells Delivered with a Nanofiber Scaffold for Tendon-to-Bone Repair.Lipner, Justin; Shen, Hua; Cavinatto, Leonardo; Liu, Wenying; Havlioglu, Necat; Xia, Younan; Galatz, Leesa M; Thomopoulos, StavrosTissue engineering. Part A.2015 Nov;2766-7426414599
Redesigning Recombinase Specificity for Safe Harbor Sites in the Human Genome.Wallen, Mark C; Gaj, Thomas; Barbas 3rd, Carlos FPloS one.2015;e013912326414179
AgRP Neurons Regulate Bone Mass.Kim, Jae Geun; Sun, Ben-Hua; Dietrich, Marcelo O; Koch, Marco; Yao, Gang-Qing; Diano, Sabrina; Insogna, Karl; Horvath, Tamas LCell reports.2015 Oct 6;14-Aug26411686
The DNA damage response induces inflammation and senescence by inhibiting autophagy of GATA4.Kang, Chanhee; Xu, Qikai; Martin, Timothy D; Li, Mamie Z; Demaria, Marco; Aron, Liviu; Lu, Tao; Yankner, Bruce A; Campisi, Judith; Elledge, Stephen JScience (New York, N.Y.).2015 Sep 25;aaa561226404840
Stress weakens prefrontal networks: molecular insults to higher cognition.Arnsten, Amy F TNature neuroscience.2015 Oct;1376-8526404712
Waking State: Rapid Variations Modulate Neural and Behavioral Responses.McGinley, Matthew J; Vinck, Martin; Reimer, Jacob; Batista-Brito, Renata; Zagha, Edward; Cadwell, Cathryn R; Tolias, Andreas S; Cardin, Jessica A; McCormick, David ANeuron.2015 Sep 23;1143-6126402600
CAUSEL: an epigenome- and genome-editing pipeline for establishing function of noncoding GWAS variants.Spisák, Sándor; Lawrenson, Kate; Fu, Yanfang; Csabai, István; Cottman, Rebecca T; Seo, Ji-Heui; Haiman, Christopher; Han, Ying; Lenci, Romina; Li, Qiyuan; Tisza, Viktória; Szállási, Zoltán; Herbert, Zachery T; Chabot, Matthew; Pomerantz, Mark; Solymosi, Norbert; GAME-ON/ELLIPSE Consortium; Gayther, Simon A; Joung, J Keith; Freedman, Matthew LNature medicine.2015 Nov;1357-6326398868
Optimization of yeast-based production of medicinal protoberberine alkaloids.Galanie, Stephanie; Smolke, Christina DMicrobial cell factories.2015;14426376732
Epigenetic regulation of ageing: linking environmental inputs to genomic stability.Benayoun, Bérénice A; Pollina, Elizabeth A; Brunet, AnneNature reviews. Molecular cell biology.2015 Oct;593-61026373265
Involvement of Lipocalin-like CghA in Decalin-Forming Stereoselective Intramolecular [4+2] Cycloaddition.Sato, Michio; Yagishita, Fumitoshi; Mino, Takashi; Uchiyama, Nahoko; Patel, Ashay; Chooi, Yit-Heng; Goda, Yukihiro; Xu, Wei; Noguchi, Hiroshi; Yamamoto, Tsuyoshi; Hotta, Kinya; Houk, Kendall N; Tang, Yi; Watanabe, KenjiChembiochem : a European journal of chemical biology.2015 Nov;2294-826360642
Mobile AMPARs are required for synaptic plasticity.Hoerndli, Frédéric J; Kallarackal, Angy J; Maricq, Andres VChannels (Austin, Tex.).2015;230-226359683
N(6)-Methyladenosine Modification in a Long Noncoding RNA Hairpin Predisposes Its Conformation to Protein Binding.Zhou, Katherine I; Parisien, Marc; Dai, Qing; Liu, Nian; Diatchenko, Luda; Sachleben, Joseph R; Pan, TaoJournal of molecular biology.2015 Sep 4;26343757
Efficient Biosynthesis of Fungal Polyketides Containing the Dioxabicyclo-octane Ring System.Mao, Xu-Ming; Zhan, Zha-Jun; Grayson, Matthew N; Tang, Man-Cheng; Xu, Wei; Li, Yong-Quan; Yin, Wen-Bing; Lin, Hsiao-Ching; Chooi, Yit-Heng; Houk, K N; Tang, YiJournal of the American Chemical Society.2015 Sep 23;11904-726340065
Members Only: Hypoxia-Induced Cell-Cycle Activation in Cardiomyocytes.Sharma, Arun; Wu, Sean MCell metabolism.2015 Sep 1;365-626331604
Harnessing the Induction of Cardiomyocyte Proliferation for Cardiac Regenerative Medicine.Sharma, Arun; Zhang, Yuan; Wu, Sean MCurrent treatment options in cardiovascular medicine.2015 Oct;40426324824
Crystal Structure of Staphylococcus aureus Cas9.Nishimasu, Hiroshi; Cong, Le; Yan, Winston X; Ran, F Ann; Zetsche, Bernd; Li, Yinqing; Kurabayashi, Arisa; Ishitani, Ryuichiro; Zhang, Feng; Nureki, OsamuCell.2015 Aug 27;1113-2626317473
Gold Nanomaterials at Work in Biomedicine.Yang, Xuan; Yang, Miaoxin; Pang, Bo; Vara, Madeline; Xia, YounanChemical reviews.2015 Oct 14;10410-8826293344
Structured Variability in Purkinje Cell Activity during Locomotion.Sauerbrei, Britton A; Lubenov, Evgueniy V; Siapas, Athanassios GNeuron.2015 Aug 19;840-5226291165
In reply.Purdon, Patrick L; Zhou, David W; Akeju, Oluwaseun; Brown, Emery NAnesthesiology.2015 Sep;725-826284863
Clinical Electroencephalography for Anesthesiologists: Part I: Background and Basic Signatures.Purdon, Patrick L; Sampson, Aaron; Pavone, Kara J; Brown, Emery NAnesthesiology.2015 Aug 14;26275092
Complete biosynthesis of opioids in yeast.Galanie, Stephanie; Thodey, Kate; Trenchard, Isis J; Filsinger Interrante, Maria; Smolke, Christina DScience (New York, N.Y.).2015 Sep 4;1095-10026272907
Exposure to SIV in utero results in reduced viral loads and altered responsiveness to postnatal challenge.Baker, Chris A R; Swainson, Louise; Lin, Din L; Wong, Samson; Hartigan-O'Connor, Dennis J; Lifson, Jeffrey D; Tarantal, Alice F; McCune, Joseph MScience translational medicine.2015 Aug 12;300ra12526268312
A PK-PD model of ketamine-induced high-frequency oscillations.Flores, Francisco J; Ching, ShiNung; Hartnack, Katharine; Fath, Amanda B; Purdon, Patrick L; Wilson, Matthew A; Brown, Emery NJournal of neural engineering.2015 Oct;5600626268223
High-throughput cellular RNA device engineering.Townshend, Brent; Kennedy, Andrew B; Xiang, Joy S; Smolke, Christina DNature methods.2015 Oct;989-9426258292
An Autism-Linked Mutation Disables Phosphorylation Control of UBE3A.Yi, Jason J; Berrios, Janet; Newbern, Jason M; Snider, William D; Philpot, Benjamin D; Hahn, Klaus M; Zylka, Mark JCell.2015 Aug 13;795-80726255772
Organization of the Mammalian Metabolome according to Organ Function, Lineage Specialization, and Longevity.Ma, Siming; Yim, Sun Hee; Lee, Sang-Goo; Kim, Eun Bae; Lee, Sang-Rae; Chang, Kyu-Tae; Buffenstein, Rochelle; Lewis, Kaitlyn N; Park, Thomas J; Miller, Richard A; Clish, Clary B; Gladyshev, Vadim NCell metabolism.2015 Aug 4;332-4326244935
Dysregulation of FMRP/mTOR Signaling Cascade in Hypoxic-Ischemic Injury of Premature Human Brain.Lechpammer, Mirna; Wintermark, Pia; Merry, Katherine M; Jackson, Michele C; Jantzie, Lauren L; Jensen, Frances EJournal of child neurology.2015 Aug 3;26239490
High-throughput determination of RNA structure by proximity ligation.Ramani, Vijay; Qiu, Ruolan; Shendure, JayNature biotechnology.2015 Sep;980-426237516
In Silico Reconstruction of the Viral Evolutionary Lineage Yields a Potent Gene Therapy Vector.Zinn, Eric; Pacouret, Simon; Khaychuk, Vadim; Turunen, Heikki T; Carvalho, Livia S; Andres-Mateos, Eva; Shah, Samiksha; Shelke, Rajani; Maurer, Anna C; Plovie, Eva; Xiao, Ru; Vandenberghe, Luk HCell reports.2015 Aug 11;1056-6826235624
PIKfyve mediates the motility of late endosomes and lysosomes in neuronal dendrites.Tsuruta, Fuminori; Dolmetsch, Ricardo ENeuroscience letters.2015 Jul 29;18-2326232680
Efficient and quantitative high-throughput tRNA sequencing.Zheng, Guanqun; Qin, Yidan; Clark, Wesley C; Dai, Qing; Yi, Chengqi; He, Chuan; Lambowitz, Alan M; Pan, TaoNature methods.2015 Sep;835-726214130
Chemoenzymatic syntheses of water-soluble lipid I fluorescent probes.Mitachi, Katsuhiko; Siricilla, Shajila; Klaic, Lada; Clemons Jr, William M; Kurosu, MichioTetrahedron letters.2015 Jun 3;3441-344626190869
Plasticity of the human visual system after retinal gene therapy in patients with Leber's congenital amaurosis.Ashtari, Manzar; Zhang, Hui; Cook, Philip A; Cyckowski, Laura L; Shindler, Kenneth S; Marshall, Kathleen A; Aravand, Puya; Vossough, Arastoo; Gee, James C; Maguire, Albert M; Baker, Chris I; Bennett, JeanScience translational medicine.2015 Jul 15;296ra11026180100
Age-dependency of sevoflurane-induced electroencephalogram dynamics in children.Akeju, O; Pavone, K J; Thum, J A; Firth, P G; Westover, M B; Puglia, M; Shank, E S; Brown, E N; Purdon, P LBritish journal of anaesthesia.2015 Jul;i66-i7626174303
Ageing delays emergence from general anaesthesia in rats by increasing anaesthetic sensitivity in the brain.Chemali, J J; Kenny, J D; Olutola, O; Taylor, N E; Kimchi, E Y; Purdon, P L; Brown, E N; Solt, KBritish journal of anaesthesia.2015 Jul;i58-i6526174302
Biochemical and Structural Basis for Controlling Chemical Modularity in Fungal Polyketide Biosynthesis.Winter, Jaclyn M; Cascio, Duilio; Dietrich, David; Sato, Michio; Watanabe, Kenji; Sawaya, Michael R; Vederas, John C; Tang, YiJournal of the American Chemical Society.2015 Aug 12;9885-9326172141
Focal Points, Endogenous Processes, and Exogenous Shocks in the Autism Epidemic.Liu, Kayuet; Bearman, Peter SSociological methods & research.2015 May 1;272-30526166907
De novo production of the key branch point benzylisoquinoline alkaloid reticuline in yeast.Trenchard, Isis J; Siddiqui, Michael S; Thodey, Kate; Smolke, Christina DMetabolic engineering.2015 Jul 10;74-8326166409
Building an organic computing device with multiple interconnected brains.Pais-Vieira, Miguel; Chiuffa, Gabriela; Lebedev, Mikhail; Yadav, Amol; Nicolelis, Miguel A LScientific reports.2015;1186926158615
Computing Arm Movements with a Monkey Brainet.Ramakrishnan, Arjun; Ifft, Peter J; Pais-Vieira, Miguel; Byun, Yoon Woo; Zhuang, Katie Z; Lebedev, Mikhail A; Nicolelis, Miguel A LScientific reports.2015;1076726158523
Its preferential interactions with biopolymers account for diverse observed effects of trehalose.Hong, Jiang; Gierasch, Lila M; Liu, ZhichengBiophysical journal.2015 Jul 7;144-5326153711
Reference-free removal of EEG-fMRI ballistocardiogram artifacts with harmonic regression.Krishnaswamy, Pavitra; Bonmassar, Giorgio; Poulsen, Catherine; Pierce, Eric T; Purdon, Patrick L; Brown, Emery NNeuroImage.2015 Jul 5;26151100
The evolving capabilities of rhodopsin-based genetically encoded voltage indicators.Gong, YiyangCurrent opinion in chemical biology.2015 Aug;84-926143170
Piwi Is a Key Regulator of Both Somatic and Germline Stem Cells in the Drosophila Testis.Gonzalez, Jacob; Qi, Hongying; Liu, Na; Lin, HaifanCell reports.2015 Jul 7;150-6126119740
Nitrous oxide-induced slow and delta oscillations.Pavone, Kara J; Akeju, Oluwaseun; Sampson, Aaron L; Ling, Kelly; Purdon, Patrick L; Brown, Emery NClinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology.2015 Jun 10;26118489
Control of cerebrovascular patterning by neural activity during postnatal development.Lacoste, Baptiste; Gu, ChenghuaMechanisms of development.2015 Nov;43-926116138
Dopamine's Actions in Primate Prefrontal Cortex: Challenges for Treating Cognitive Disorders.Arnsten, Amy F T; Wang, Min; Paspalas, Constantinos DPharmacological reviews.2015 Jul;681-9626106146
Antibiotic efficacy is linked to bacterial cellular respiration.Lobritz, Michael A; Belenky, Peter; Porter, Caroline B M; Gutierrez, Arnaud; Yang, Jason H; Schwarz, Eric G; Dwyer, Daniel J; Khalil, Ahmad S; Collins, James JProceedings of the National Academy of Sciences of the United States of America.2015 Jul 7;8173-8026100898
A cationic cysteine-hydrazide as an enrichment tool for the mass spectrometric characterization of bacterial free oligosaccharides.Jang, Kyoung-Soon; Nani, Roger R; Kalli, Anastasia; Levin, Sergiy; Müller, Axel; Hess, Sonja; Reisman, Sarah E; Clemons Jr, William MAnalytical and bioanalytical chemistry.2015 Aug;6181-9026100547
Engineered CRISPR-Cas9 nucleases with altered PAM specificities.Kleinstiver, Benjamin P; Prew, Michelle S; Tsai, Shengdar Q; Topkar, Ved V; Nguyen, Nhu T; Zheng, Zongli; Gonzales, Andrew P W; Li, Zhuyun; Peterson, Randall T; Yeh, Jing-Ruey Joanna; Aryee, Martin J; Joung, J KeithNature.2015 Jul 23;481-526098369
Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis.Levine, Jacob H; Simonds, Erin F; Bendall, Sean C; Davis, Kara L; Amir, El-ad D; Tadmor, Michelle D; Litvin, Oren; Fienberg, Harris G; Jager, Astraea; Zunder, Eli R; Finck, Rachel; Gedman, Amanda L; Radtke, Ina; Downing, James R; Pe'er, Dana; Nolan, GarryCell.2015 Jul 2;184-9726095251
Quantitative two-photon imaging of fluorescent biosensors.Yellen, Gary; Mongeon, RebeccaCurrent opinion in chemical biology.2015 Jun 12;24-3026079046
Single-Cell Whole-Genome Amplification and Sequencing: Methodology and Applications.Huang, Lei; Ma, Fei; Chapman, Alec; Lu, Sijia; Xie, Xiaoliang SunneyAnnual review of genomics and human genetics.2015;79-10226077818
Iron Toxicity in the Retina Requires Alu RNA and the NLRP3 Inflammasome.Gelfand, Bradley D; Wright, Charles B; Kim, Younghee; Yasuma, Tetsuhiro; Yasuma, Reo; Li, Shengjian; Fowler, Benjamin J; Bastos-Carvalho, Ana; Kerur, Nagaraj; Uittenbogaard, Annette; Han, Youn Seon; Lou, Dingyuan; Kleinman, Mark E; McDonald, W Hayes; Núñez, Gabriel; Georgel, Philippe; Dunaief, Joshua L; Ambati, JayakrishnaCell reports.2015 Jun 23;1686-9326074074
Ultra-large field-of-view two-photon microscopy.Tsai, Philbert S; Mateo, Celine; Field, Jeffrey J; Schaffer, Chris B; Anderson, Matthew E; Kleinfeld, DavidOptics express.2015 Jun 1;13833-4726072755
Basal exon skipping and genetic pleiotropy: A predictive model of disease pathogenesis.Drivas, Theodore G; Wojno, Adam P; Tucker, Budd A; Stone, Edwin M; Bennett, JeanScience translational medicine.2015 Jun 10;291ra9726062849
Syringe-injectable electronics.Liu, Jia; Fu, Tian-Ming; Cheng, Zengguang; Hong, Guosong; Zhou, Tao; Jin, Lihua; Duvvuri, Madhavi; Jiang, Zhe; Kruskal, Peter; Xie, Chong; Suo, Zhigang; Fang, Ying; Lieber, Charles MNature nanotechnology.2015 Jul;629-3626053995
Robust control of burst suppression for medical coma.Westover, M Brandon; Kim, Seong-Eun; Ching, ShiNung; Purdon, Patrick L; Brown, Emery NJournal of neural engineering.2015 Aug;4600426020243
Epigenetic genome mining of an endophytic fungus leads to the pleiotropic biosynthesis of natural products.Mao, Xu-Ming; Xu, Wei; Li, Dehai; Yin, Wen-Bing; Chooi, Yit-Heng; Li, Yong-Quan; Tang, Yi; Hu, YoucaiAngewandte Chemie (International ed. in English).2015 Jun 22;7592-626013262
Dexterous robotic manipulation of alert adult Drosophila for high-content experimentation.Savall, Joan; Ho, Eric Tatt Wei; Huang, Cheng; Maxey, Jessica R; Schnitzer, Mark JNature methods.2015 Jul;657-6026005812
Probabilistic Common Spatial Patterns for Multichannel EEG Analysis.Wu, Wei; Chen, Zhe; Gao, Xiaorong; Li, Yuanqing; Brown, Emery N; Gao, ShangkaiIEEE transactions on pattern analysis and machine intelligence.2015 Mar 1;639-65326005228
Computational modeling of cardiac optogenetics: Methodology overview & review of findings from simulations.Boyle, Patrick M; Karathanos, Thomas V; Entcheva, Emilia; Trayanova, Natalia AComputers in biology and medicine.2015 Oct 1;200-826002074
Evolution. Systematic humanization of yeast genes reveals conserved functions and genetic modularity.Kachroo, Aashiq H; Laurent, Jon M; Yellman, Christopher M; Meyer, Austin G; Wilke, Claus O; Marcotte, Edward MScience (New York, N.Y.).2015 May 22;921-525999509
Does Autism Diagnosis Age or Symptom Severity Differ Among Children According to Whether Assisted Reproductive Technology was Used to Achieve Pregnancy?Schieve, Laura A; Fountain, Christine; Boulet, Sheree L; Yeargin-Allsopp, Marshalyn; Kissin, Dmitry M; Jamieson, Denise J; Rice, Catherine; Bearman, PeterJournal of autism and developmental disorders.2015 Sep;2991-300325997596
Measuring the signal-to-noise ratio of a neuron.Czanner, Gabriela; Sarma, Sridevi V; Ba, Demba; Eden, Uri T; Wu, Wei; Eskandar, Emad; Lim, Hubert H; Temereanca, Simona; Suzuki, Wendy A; Brown, Emery NProceedings of the National Academy of Sciences of the United States of America.2015 Jun 9;7141-625995363
Fetal Mammalian Heart Generates a Robust Compensatory Response to Cell Loss.Sturzu, Anthony C; Rajarajan, Kuppusamy; Passer, Derek; Plonowska, Karolina; Riley, Alyssa; Tan, Timothy C; Sharma, Arun; Xu, Adele F; Engels, Marc C; Feistritzer, Rebecca; Li, Guang; Selig, Martin K; Geissler, Richard; Robertson, Keston D; Scherrer-CrosbCirculation.2015 Jul 14;109-2125995316
Ultrasonic-heating-encoded photoacoustic tomography with virtually augmented detection view.Wang, Lidai; Li, Guo; Xia, Jun; Wang, Lihong VOptica.2015;307-31225984555
Regenerative Engineering and Bionic Limbs.James, Roshan; Laurencin, Cato TRare metals.2015 Mar 1;143-15525983525
Does language do more than communicate emotion?Lindquist, Kristen A; Satpute, Ajay B; Gendron, MariaCurrent directions in psychological science.2015 Apr 1;99-10825983400
Engineering strategies for the fermentative production of plant alkaloids in yeast.Trenchard, Isis J; Smolke, Christina DMetabolic engineering.2015 Jul;96-10425981946
Photoacoustic microscopy: superdepth, superresolution, and superb contrast.Yao, Junjie; Song, Liang; Wang, Lihing VIEEE pulse.2015 May-Jun;34-725974913
Single molecules meet genomics: pinpointing precision medicine.Xie, Xiaoliang SunneyJAMA.2015 May 26;2021-225974149
Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes.Beliveau, Brian J; Boettiger, Alistair N; Avendaño, Maier S; Jungmann, Ralf; McCole, Ruth B; Joyce, Eric F; Kim-Kiselak, Caroline; Bantignies, Frédéric; Fonseka, Chamith Y; Erceg, Jelena; Hannan, Mohammed A; Hoang, Hien G; Colognori, David; Lee, Jeannie T; Shih, William M; Yin, Peng; Zhuang, Xiaowei; Wu, Chao-tingNature communications.2015;714725962338
Cells change their sensitivity to an EGF morphogen gradient to control EGF-induced gene expression.van Zon, Jeroen Sebastiaan; Kienle, Simone; Huelsz-Prince, Guizela; Barkoulas, Michalis; van Oudenaarden, AlexanderNature communications.2015;705325958991
Direct in vivo assessment of human stem cell graft-host neural circuits.Byers, Blake; Lee, Hyun Joo; Liu, Jia; Weitz, Andrew J; Lin, Peter; Zhang, Pengbo; Shcheglovitov, Aleksandr; Dolmetsch, Ricardo; Pera, Renee Reijo; Lee, Jin HyungNeuroImage.2015 Jul 1;328-3725936696
Quantifying Pituitary-Adrenal Dynamics and Deconvolution of Concurrent Cortisol and Adrenocorticotropic Hormone Data by Compressed Sensing.Faghih, Rose; Dahleh, Munther; Adler, Gail; Klerman, Elizabeth; Brown, EmeryIEEE transactions on bio-medical engineering.2015 Apr 29;25935025
Multiscale Functional and Molecular Photoacoustic Tomography.Yao, Junjie; Xia, Jun; Wang, Lihong VUltrasonic imaging.2015 May 1;25933617
Photoacoustically guided wavefront shaping for enhanced optical focusing in scattering media.Lai, Puxiang; Wang, Lidai; Tay, Jian Wei; Wang, Lihong VNature photonics.2015 Feb;126-13225914725
Gene length matters in neurons.Zylka, Mark J; Simon, Jeremy M; Philpot, Benjamin DNeuron.2015 Apr 22;353-525905808
Noninvasive imaging of immune responses.Rashidian, Mohammad; Keliher, Edmund J; Bilate, Angelina M; Duarte, Joao N; Wojtkiewicz, Gregory R; Jacobsen, Johanne Tracey; Cragnolini, Juanjo; Swee, Lee Kim; Victora, Gabriel D; Weissleder, Ralph; Ploegh, Hidde LProceedings of the National Academy of Sciences of the United States of America.2015 May 12;6146-5125902531
Ca(2+) signaling in astrocytes from Ip3r2(-/-) mice in brain slices and during startle responses in vivo.Srinivasan, Rahul; Huang, Ben S; Venugopal, Sharmila; Johnston, April D; Chai, Hua; Zeng, Hongkui; Golshani, Peyman; Khakh, Baljit SNature neuroscience.2015 May;708-1725894291
Drosophila dicer-2 cleavage is mediated by helicase- and dsRNA termini-dependent states that are modulated by Loquacious-PD.Sinha, Niladri K; Trettin, Kyle D; Aruscavage, P Joseph; Bass, Brenda LMolecular cell.2015 May 7;406-1725891075
What Is Next for Retinal Gene Therapy?Vandenberghe, Luk HCold Spring Harbor perspectives in medicine.2015 Apr 15;25877395
Three-dimensional photoacoustic endoscopic imaging of the rabbit esophagus.Yang, Joon Mo; Favazza, Christopher; Yao, Junjie; Chen, Ruimin; Zhou, Qifa; Shung, K Kirk; Wang, Lihong VPloS one.2015;e012026925874640
Powerful anti-tumor and anti-angiogenic activity of a new anti-vascular endothelial growth factor receptor 1 peptide in colorectal cancer models.Cicatiello, Valeria; Apicella, Ivana; Tudisco, Laura; Tarallo, Valeria; Formisano, Luigi; Sandomenico, Annamaria; Kim, Younghee; Bastos-Carvalho, Ana; Orlandi, Augusto; Ambati, Jayakrishna; Ruvo, Menotti; Bianco, Roberto; De Falco, SandroOncotarget.2015 Apr 30;10563-7625868854
Direct protein delivery to mammalian cells using cell-permeable Cys2-His2 zinc-finger domains.Gaj, Thomas; Liu, JiaJournal of visualized experiments : JoVE.2015;25866937
Tandem prenyltransferases catalyze isoprenoid elongation and complexity generation in biosynthesis of quinolone alkaloids.Zou, Yi; Zhan, Zhajun; Li, Dehai; Tang, Mancheng; Cacho, Ralph A; Watanabe, Kenji; Tang, YiJournal of the American Chemical Society.2015 Apr 22;4980-325859931
Optical control of biological processes by light-switchable proteins.Fan, Linlin Z; Lin, Michael ZWiley interdisciplinary reviews. Developmental biology.2015 Sep-Oct;545-5425858669
Closed-loop, ultraprecise, automated craniotomies.Pak, Nikita; Siegle, Joshua H; Kinney, Justin P; Denman, Daniel J; Blanche, Timothy J; Boyden, Edward SJournal of neurophysiology.2015 Jun 1;3943-5325855700
High-throughput functional genomics using CRISPR-Cas9.Shalem, Ophir; Sanjana, Neville E; Zhang, FengNature reviews. Genetics.2015 May;299-31125854182
A Bayesian model of category-specific emotional brain responses.Wager, Tor D; Kang, Jian; Johnson, Timothy D; Nichols, Thomas E; Satpute, Ajay B; Barrett, Lisa FeldmanPLoS computational biology.2015 Apr;e100406625853490
Potential role for snoRNAs in PKR activation during metabolic stress.Youssef, Osama A; Safran, Sarah A; Nakamura, Takahisa; Nix, David A; Hotamisligil, Gokhan S; Bass, Brenda LProceedings of the National Academy of Sciences of the United States of America.2015 Apr 21;5023-825848059
Discovery of tricyclic indoles that potently inhibit Mcl-1 using fragment-based methods and structure-based design.Burke, Jason P; Bian, Zhiguo; Shaw, Subrata; Zhao, Bin; Goodwin, Craig M; Belmar, Johannes; Browning, Carrie F; Vigil, Dominico; Friberg, Anders; Camper, DeMarco V; Rossanese, Olivia W; Lee, Taekyu; Olejniczak, Edward T; Fesik, Stephen WJournal of medicinal chemistry.2015 May 14;3794-80525844895
Neuronal Activity and CaMKII Regulate Kinesin-Mediated Transport of Synaptic AMPARs.Hoerndli, Frédéric J; Wang, Rui; Mellem, Jerry E; Kallarackal, Angy; Brockie, Penelope J; Thacker, Colin; Madsen, David M; Maricq, Andres VNeuron.2015 Apr 22;457-7425843407
In vivo genome editing using Staphylococcus aureus Cas9.Ran, F Ann; Cong, Le; Yan, Winston X; Scott, David A; Gootenberg, Jonathan S; Kriz, Andrea J; Zetsche, Bernd; Shalem, Ophir; Wu, Xuebing; Makarova, Kira S; Koonin, Eugene V; Sharp, Phillip A; Zhang, FengNature.2015 Apr 9;186-9125830891
Copy-number variation and false positive prenatal aneuploidy screening results.Snyder, Matthew W; Simmons, LaVone E; Kitzman, Jacob O; Coe, Bradley P; Henson, Jessica M; Daza, Riza M; Eichler, Evan E; Shendure, Jay; Gammill, Hilary SThe New England journal of medicine.2015 Apr 23;1639-4525830323
Improved estimation and interpretation of correlations in neural circuits.Yatsenko, Dimitri; Josi?, Kre?imir; Ecker, Alexander S; Froudarakis, Emmanouil; Cotton, R James; Tolias, Andreas SPLoS computational biology.2015 Mar;e100408325826696
Massively Parallel Functional Analysis of BRCA1 RING Domain Variants.Starita, Lea M; Young, David L; Islam, Muhtadi; Kitzman, Jacob O; Gullingsrud, Justin; Hause, Ronald J; Fowler, Douglas M; Parvin, Jeffrey D; Shendure, Jay; Fields, StanleyGenetics.2015 Jun;413-2225823446
High-speed label-free functional photoacoustic microscopy of mouse brain in action.Yao, Junjie; Wang, Lidai; Yang, Joon-Mo; Maslov, Konstantin I; Wong, Terence T W; Li, Lei; Huang, Chih-Hsien; Zou, Jun; Wang, Lihong VNature methods.2015 May;407-1025822799
Single cell transcriptome amplification with MALBAC.Chapman, Alec R; He, Zi; Lu, Sijia; Yong, Jun; Tan, Longzhi; Tang, Fuchou; Xie, X SunneyPloS one.2015;e012088925822772
Interaction with WDR5 promotes target gene recognition and tumorigenesis by MYC.Thomas, Lance R; Wang, Qingguo; Grieb, Brian C; Phan, Jason; Foshage, Audra M; Sun, Qi; Olejniczak, Edward T; Clark, Travis; Dey, Soumyadeep; Lorey, Shelly; Alicie, Bethany; Howard, Gregory C; Cawthon, Bryan; Ess, Kevin C; Eischen, Christine M; Zhao, Zhongming; Fesik, Stephen W; Tansey, William PMolecular cell.2015 May 7;440-5225818646
Multiple facets for extracellular matrix mimicking in regenerative medicine.Zhang, Yu Shrike; Xia, YounanNanomedicine (London, England).2015;689-9225816873
I'm eating for two: parental dietary effects on offspring metabolism.Rando, Oliver J; Simmons, Rebecca ACell.2015 Mar 26;93-10525815988
Genome-wide profiling of the C. elegans dsRNAome.Whipple, Joseph M; Youssef, Osama A; Aruscavage, P Joseph; Nix, David A; Hong, Changjin; Johnson, W Evan; Bass, Brenda LRNA (New York, N.Y.).2015 May;786-80025805852
Reassessment of Piwi binding to the genome and Piwi impact on RNA polymerase II distribution.Lin, Haifan; Chen, Mengjie; Kundaje, Anshul; Valouev, Anton; Yin, Hang; Liu, Na; Neuenkirchen, Nils; Zhong, Mei; Snyder, MichaelDevelopmental cell.2015 Mar 23;772-425805139
Optical-resolution photoacoustic endomicroscopy in vivo.Yang, Joon-Mo; Li, Chiye; Chen, Ruimin; Rao, Bin; Yao, Junjie; Yeh, Cheng-Hung; Danielli, Amos; Maslov, Konstantin; Zhou, Qifa; Shung, K Kirk; Wang, Lihong VBiomedical optics express.2015 Mar 1;918-3225798315
N-Sulfonyl-?-lactam hapten as an effective labeling reagent for aldolase mAb.Inokuma, Tsubasa; Fuller, Roberta P; Barbas 3rd, Carlos FBioorganic & medicinal chemistry letters.2015 Apr 15;1684-725791455
Association between assisted reproductive technology conception and autism in California, 1997-2007.Fountain, Christine; Zhang, Yujia; Kissin, Dmitry M; Schieve, Laura A; Jamieson, Denise J; Rice, Catherine; Bearman, PeterAmerican journal of public health.2015 May;963-7125790396
Principles of designing interpretable optogenetic behavior experiments.Allen, Brian D; Singer, Annabelle C; Boyden, Edward SLearning & memory (Cold Spring Harbor, N.Y.).2015 Apr;232-825787711
Optochemical dissection of T-box gene-dependent medial floor plate development.Payumo, Alexander Y; Walker, Whitney J; McQuade, Lindsey E; Yamazoe, Sayumi; Chen, James KACS chemical biology.2015 Jun 19;1466-7525781211
Antibody engineering for increased potency, breadth and half-life.Sievers, Stuart A; Scharf, Louise; West Jr, Anthony P; Bjorkman, Pamela JCurrent opinion in HIV and AIDS.2015 May;151-925760931
Noninvasive photoacoustic microscopy of methemoglobin in vivo.Tang, Min; Zhou, Yong; Zhang, Ruiying; Wang, Lihong VJournal of biomedical optics.2015 Mar;3600725760655
Prolonged Period of Cortical Plasticity upon Redox Dysregulation in Fast-Spiking Interneurons.Morishita, Hirofumi; Cabungcal, Jan-Harry; Chen, Ying; Do, Kim Q; Hensch, Takao KBiological psychiatry.2015 Sep 15;396-40225758057
Genome-wide CRISPR screen in a mouse model of tumor growth and metastasis.Chen, Sidi; Sanjana, Neville E; Zheng, Kaijie; Shalem, Ophir; Lee, Kyungheon; Shi, Xi; Scott, David A; Song, Jun; Pan, Jen Q; Weissleder, Ralph; Lee, Hakho; Zhang, Feng; Sharp, Phillip ACell.2015 Mar 12;1246-6025748654
Hypothalamic Agrp neurons drive stereotypic behaviors beyond feeding.Dietrich, Marcelo O; Zimmer, Marcelo R; Bober, Jeremy; Horvath, Tamas LCell.2015 Mar 12;1222-3225748653
Structural biology. Structural basis for chemokine recognition and activation of a viral G protein-coupled receptor.Burg, John S; Ingram, Jessica R; Venkatakrishnan, A J; Jude, Kevin M; Dukkipati, Abhiram; Feinberg, Evan N; Angelini, Alessandro; Waghray, Deepa; Dror, Ron O; Ploegh, Hidde L; Garcia, K ChristopherScience (New York, N.Y.).2015 Mar 6;1113-725745166
High relaxivity Gd(III)-DNA gold nanostars: investigation of shape effects on proton relaxation.Rotz, Matthew W; Culver, Kayla S B; Parigi, Giacomo; MacRenaris, Keith W; Luchinat, Claudio; Odom, Teri W; Meade, Thomas JACS nano.2015 Mar 24;3385-9625723190
An evolutionary role for HIV latency in enhancing viral transmission.Rouzine, Igor M; Weinberger, Ariel D; Weinberger, Leor SCell.2015 Feb 26;1002-1225723173
A theoretical justification for single molecule peptide sequencing.Swaminathan, Jagannath; Boulgakov, Alexander A; Marcotte, Edward MPLoS computational biology.2015 Feb;e100408025714988
The DEAH-box helicase Dhr1 dissociates U3 from the pre-rRNA to promote formation of the central pseudoknot.Sardana, Richa; Liu, Xin; Granneman, Sander; Zhu, Jieyi; Gill, Michael; Papoulas, Ophelia; Marcotte, Edward M; Tollervey, David; Correll, Carl C; Johnson, Arlen WPLoS biology.2015 Feb;e100208325710520
Hypothalamic POMC neurons promote cannabinoid-induced feeding.Koch, Marco; Varela, Luis; Kim, Jae Geun; Kim, Jung Dae; Hernández-Nuño, Francisco; Simonds, Stephanie E; Castorena, Carlos M; Vianna, Claudia R; Elmquist, Joel K; Morozov, Yury M; Rakic, Pasko; Bechmann, Ingo; Cowley, Michael A; Szigeti-Buck, Klara; Dietrich, Marcelo O; Gao, Xiao-Bing; Diano, Sabrina; Horvath, Tamas LNature.2015 Mar 5;45-5025707796
Threat perception after the Boston Marathon bombings: The effects of personal relevance and conceptual framing.Wormwood, Jolie Baumann; Lynn, Spencer K; Feldman Barrett, Lisa; Quigley, Karen SCognition & emotion.2016 Apr;539-4925707419
Robust and fragile aspects of cortical blood flow in relation to the underlying angioarchitecture.Shih, Andy Y; Rühlmann, Charlotta; Blinder, Pablo; Devor, Anna; Drew, Patrick J; Friedman, Beth; Knutsen, Per M; Lyden, Patrick D; Matéo, Céline; Mellander, Lisa; Nishimura, Nozomi; Schaffer, Chris B; Tsai, Philbert S; Kleinfeld, DavidMicrocirculation (New York, N.Y. : 1994).2015 Apr;204-1825705966
Corrigendum to ''effects of fibrosis morphology on reentrant ventricular tachycardia inducibility and simulation fidelity in patient-derived models''.Ringenberg, Jordan; Deo, Makarand; Filgueiras-Rama, David; Pizarro, Gonzalo; Ibañez, Borja; Peinado, Rafael; Trayanova, Natalia; Miller, Michael; Merino, José L; Berenfeld, Omer; Devabhaktuni, VijayClinical Medicine Insights. Cardiology.2014;5125698881
Tripling the detection view of high-frequency linear-array-based photoacoustic computed tomography by using two planar acoustic reflectors.Li, Guo; Xia, Jun; Wang, Kun; Maslov, Konstantin; Anastasio, Mark A; Wang, Lihong VQuantitative imaging in medicine and surgery.2015 Feb;57-6225694954
Multiscale modelling of relationships between protein classes and drug behavior across all diseases using the CANDO platform.Sethi, Geetika; Chopra, Gaurav; Samudrala, RamMini reviews in medicinal chemistry.2015;705-1725694071
Virtual electrophysiological study of atrial fibrillation in fibrotic remodeling.McDowell, Kathleen S; Zahid, Sohail; Vadakkumpadan, Fijoy; Blauer, Joshua; MacLeod, Rob S; Trayanova, Natalia APloS one.2015;e011711025692857
A platform for rapid exploration of aging and diseases in a naturally short-lived vertebrate.Harel, Itamar; Benayoun, Bérénice A; Machado, Ben; Singh, Param Priya; Hu, Chi-Kuo; Pech, Matthew F; Valenzano, Dario Riccardo; Zhang, Elisa; Sharp, Sabrina C; Artandi, Steven E; Brunet, AnneCell.2015 Feb 26;1013-2625684364
Intrinsic connectivity in the human brain does not reveal networks for 'basic' emotions.Touroutoglou, Alexandra; Lindquist, Kristen A; Dickerson, Bradford C; Barrett, Lisa FeldmanSocial cognitive and affective neuroscience.2015 Feb 12;25680990
Nonlytic spread of naked viruses.Bird, Sara W; Kirkegaard, KarlaAutophagy.2015;430-125680079
HypE-specific nanobodies as tools to modulate HypE-mediated target AMPylation.Truttmann, Matthias C; Wu, Qin; Stiegeler, Sarah; Duarte, Joao N; Ingram, Jessica; Ploegh, Hidde LThe Journal of biological chemistry.2015 Apr 3;9087-10025678711
Gene expression defines natural changes in mammalian lifespan.Fushan, Alexey A; Turanov, Anton A; Lee, Sang-Goo; Kim, Eun Bae; Lobanov, Alexei V; Yim, Sun Hee; Buffenstein, Rochelle; Lee, Sang-Rae; Chang, Kyu-Tae; Rhee, Hwanseok; Kim, Jong-So; Yang, Kap-Seok; Gladyshev, Vadim NAging cell.2015 Jun;352-6525677554
Handheld photoacoustic probe to detect both melanoma depth and volume at high speed in vivo.Zhou, Yong; Li, Guo; Zhu, Liren; Li, Chiye; Cornelius, Lynn A; Wang, Lihong VJournal of biophotonics.2015 Feb 9;25676898
General strategy for biodetection in high ionic strength solutions using transistor-based nanoelectronic sensors.Gao, Ning; Zhou, Wei; Jiang, Xiaocheng; Hong, Guosong; Fu, Tian-Ming; Lieber, Charles MNano letters.2015 Mar 11;2143-825664395
16p11.2 Deletion Syndrome Mice Display Sensory and Ultrasonic Vocalization Deficits During Social Interactions.Yang, Mu; Mahrt, Elena J; Lewis, Freeman; Foley, Gillian; Portmann, Thomas; Dolmetsch, Ricardo E; Portfors, Christine V; Crawley, Jacqueline NAutism research : official journal of the International Society for Autism Research.2015 Feb 7;25663600
Perspectives on best practices for gene therapy programs.Cheever, Thomas R; Berkley, Dale; Braun, Serge; Brown, Robert H; Byrne, Barry J; Chamberlain, Jeffrey S; Cwik, Valerie; Duan, Dongsheng; Federoff, Howard J; High, Katherine A; Kaspar, Brian K; Klinger, Katherine W; Larkindale, Jane; Lincecum, John; Mavilio, Fulvio; McDonald, Cheryl L; McLaughlin, James; Weiss McLeod, Bonnie; Mendell, Jerry R; Nuckolls, Glen; Stedman, Hansell H; Tagle, Danilo A; Vandenberghe, Luk H; Wang, Hao; Wernett, Pamela J; Wilson, James M; Porter, John D; Gubitz, Amelie KHuman gene therapy.2015 Mar;127-3325654329
Spatial information in large-scale neural recordings.Cybulski, Thaddeus R; Glaser, Joshua I; Marblestone, Adam H; Zamft, Bradley M; Boyden, Edward S; Church, George M; Kording, Konrad PFrontiers in computational neuroscience.2014;17225653613
The evolution of drug resistance in clinical isolates of Candida albicans.Ford, Christopher B; Funt, Jason M; Abbey, Darren; Issi, Luca; Guiducci, Candace; Martinez, Diego A; Delorey, Toni; Li, Bi Yu; White, Theodore C; Cuomo, Christina; Rao, Reeta P; Berman, Judith; Thompson, Dawn A; Regev, AviveLife.2015;e0066225646566
Comparative analysis of genome maintenance genes in naked mole rat, mouse, and human.MacRae, Sheila L; Zhang, Quanwei; Lemetre, Christophe; Seim, Inge; Calder, Robert B; Hoeijmakers, Jan; Suh, Yousin; Gladyshev, Vadim N; Seluanov, Andrei; Gorbunova, Vera; Vijg, Jan; Zhang, Zhengdong DAging cell.2015 Apr;288-9125645816
Mechanism of automaticity in cardiomyocytes derived from human induced pluripotent stem cells.Kim, Jong J; Yang, Lei; Lin, Bo; Zhu, Xiaodong; Sun, Bin; Kaplan, Aaron D; Bett, Glenna C L; Rasmusson, Randall L; London, Barry; Salama, GuyJournal of molecular and cellular cardiology.2015 Apr;81-9325644533
A split-Cas9 architecture for inducible genome editing and transcription modulation.Zetsche, Bernd; Volz, Sara E; Zhang, FengNature biotechnology.2015 Feb;139-4225643054
Next-generation sequencing approach for connecting secondary metabolites to biosynthetic gene clusters in fungi.Cacho, Ralph A; Tang, Yi; Chooi, Yit-HengFrontiers in microbiology.2014;77425642215
Photoacoustic tomography: principles and advances.Xia, Jun; Yao, Junjie; Wang, Lihong VElectromagnetic waves (Cambridge, Mass.).2014;22-Jan25642127
Sparse feature selection identifies H2A.Z as a novel, pattern-specific biomarker for asymmetrically self-renewing distributed stem cells.Huh, Yang Hoon; Noh, Minsoo; Burden, Frank R; Chen, Jennifer C; Winkler, David A; Sherley, James LStem cell research.2015 Mar;144-5425636161
Intra-spike crosslinking overcomes antibody evasion by HIV-1.Galimidi, Rachel P; Klein, Joshua S; Politzer, Maria S; Bai, Shiyu; Seaman, Michael S; Nussenzweig, Michel C; West Jr, Anthony P; Bjorkman, Pamela JCell.2015 Jan 29;433-4625635457
Small RNAs make big impact in cardiac repair.Krane, Markus; Deutsch, Marcus-André; Doppler, Stefanie; Lange, Rüdiger; Wu, Sean MCirculation research.2015 Jan 30;393-525634967
Identification of cardiovascular lineage descendants at single-cell resolution.Li, Guang; Plonowska, Karolina; Kuppusamy, Rajarajan; Sturzu, Anthony; Wu, Sean MDevelopment (Cambridge, England).2015 Mar 1;846-5725633351
The Brain Basis of Positive and Negative Affect: Evidence from a Meta-Analysis of the Human Neuroimaging Literature.Lindquist, Kristen A; Satpute, Ajay B; Wager, Tor D; Weber, Jochen; Barrett, Lisa FeldmanCerebral cortex (New York, N.Y. : 1991).2015 Jan 28;25631056
Data access for the 1,000 Plants (1KP) project.Matasci, Naim; Hung, Ling-Hong; Yan, Zhixiang; Carpenter, Eric J; Wickett, Norman J; Mirarab, Siavash; Nguyen, Nam; Warnow, Tandy; Ayyampalayam, Saravanaraj; Barker, Michael; Burleigh, J Gordon; Gitzendanner, Matthew A; Wafula, Eric; Der, Joshua P; dePamphilis, Claude W; Roure, Beatrice; Philippe, Herve; Ruhfel, Brad R; Miles, Nicholas W; Graham, Sean W; Mathews, Sarah; Surek, Barbara; Melkonian, Michael; Soltis, Douglas E; Soltis, Pamela S; Rothfels, Carl; Pokorny, Lisa; Shaw, Jonathan A; DeGironimo, Lisa; Stevenson, Dennis W; Villarreal, Juan Carlos; Chen, Tao; Kutchan, Toni M; Rolf, Megan; Baucom, Regina S; Deyholos, Michael K; Samudrala, Ram; Tian, Zhijian; Wu, Xiaolei; Sun, Xiao; Zhang, Yong; Wang, Jun; Leebens-Mack, Jim; Wong, Gane Ka-ShuGigaScience.2014;1725625010
Ameliorating treatment-refractory depression with intranasal ketamine: potential NMDA receptor actions in the pain circuitry representing mental anguish.Opler, Lewis A; Opler, Mark G A; Arnsten, Amy F TCNS spectrums.2016 Feb;22-Dec25619798
In vivo deep brain imaging of rats using oral-cavity illuminated photoacoustic computed tomography.Lin, Li; Xia, Jun; Wong, Terence T W; Li, Lei; Wang, Lihong VJournal of biomedical optics.2015 Jan;1601925611865
Cultural variation in emotion perception is real: a response to Sauter, Eisner, Ekman, and Scott (2015).Gendron, Maria; Roberson, Debi; Barrett, Lisa FeldmanPsychological science.2015 Mar;357-925608863
Astrocyte calcium signaling: from observations to functions and the challenges therein.Khakh, Baljit S; McCarthy, Ken DCold Spring Harbor perspectives in biology.2015 Apr;a02040425605709
Molecular regulation of cardiomyocyte differentiation.Paige, Sharon L; Plonowska, Karolina; Xu, Adele; Wu, Sean MCirculation research.2015 Jan 16;341-5325593278
Optical imaging. Expansion microscopy.Chen, Fei; Tillberg, Paul W; Boyden, Edward SScience (New York, N.Y.).2015 Jan 30;543-825592419
The evolution of bacterial mechanosensitive channels.Booth, Ian R; Miller, Samantha; Muller, Axel; Lehtovirta-Morley, LauraCell calcium.2015 Mar;140-5025591932
Optical drug monitoring: photoacoustic imaging of nanosensors to monitor therapeutic lithium in vivo.Cash, Kevin J; Li, Chiye; Xia, Jun; Wang, Lihong V; Clark, Heather AACS nano.2015 Feb 24;1692-825588028
Chloride cotransporter NKCC1 inhibitor bumetanide protects against white matter injury in a rodent model of periventricular leukomalacia.Jantzie, Lauren L; Hu, Melody Y; Park, Hyun-Kyung; Jackson, Michele C; Yu, Jenny; Maxwell, Jessie R; Jensen, Frances EPediatric research.2015 Apr;554-6225585037
Elucidation of the concise biosynthetic pathway of the communesin indole alkaloids.Lin, Hsiao-Ching; Chiou, Grace; Chooi, Yit-Heng; McMahon, Travis C; Xu, Wei; Garg, Neil K; Tang, YiAngewandte Chemie (International ed. in English).2015 Mar 2;3004-725571861
Mouse-human experimental epigenetic analysis unmasks dietary targets and genetic liability for diabetic phenotypes.Multhaup, Michael L; Seldin, Marcus M; Jaffe, Andrew E; Lei, Xia; Kirchner, Henriette; Mondal, Prosenjit; Li, Yuanyuan; Rodriguez, Varenka; Drong, Alexander; Hussain, Mehboob; Lindgren, Cecilia; McCarthy, Mark; Naslund, Erik; Zierath, Juleen R; Wong, G William; Feinberg, Andrew PCell metabolism.2015 Jan 6;138-4925565211
Tunable loading of oligonucleotides with secondary structure on gold nanoparticles through a pH-driven method.Dam, Duncan Hieu M; Lee, Hyojin; Lee, Raymond C; Kim, Ki Hun; Kelleher, Neil L; Odom, Teri WBioconjugate chemistry.2015 Feb 18;279-8525564799
Spatial tuning of acoustofluidic pressure nodes by altering net sonic velocity enables high-throughput, efficient cell sorting.Jung, Seung-Yong; Notton, Timothy; Fong, Erika; Shusteff, Maxim; Weinberger, Leor SLab on a chip.2015 Feb 21;1000-325563937
Massively parallel single-amino-acid mutagenesis.Kitzman, Jacob O; Starita, Lea M; Lo, Russell S; Fields, Stanley; Shendure, JayNature methods.2015 Mar;203-6, 4 p following 20625559584
Multi-view optical resolution photoacoustic microscopy.Zhu, Liren; Li, Lei; Gao, Liang; Wang, Lihong VOptica.2014;217-22225558469
Optical focusing deep inside dynamic scattering media with near-infrared time-reversed ultrasonically encoded (TRUE) light.Liu, Yan; Lai, Puxiang; Ma, Cheng; Xu, Xiao; Grabar, Alexander A; Wang, Lihong VNature communications.2015;590425556918
Scaling of gene expression with transcription-factor fugacity.Weinert, Franz M; Brewster, Robert C; Rydenfelt, Mattias; Phillips, Rob; Kegel, Willem KPhysical review letters.2014 Dec 19;25810125554908
ýýýý*ýýý-targeted copper nanoparticles incorporating an Sn 2 lipase-labile fumagillin prodrug for photoacoustic neovascular imaging and treatment.Zhang, Ruiying; Pan, Dipanjan; Cai, Xin; Yang, Xiaoxia; Senpan, Angana; Allen, John S; Lanza, Gregory M; Wang, Lihong VTheranostics.2015;124-3325553103
INK4 locus of the tumor-resistant rodent, the naked mole rat, expresses a functional p15/p16 hybrid isoform.Tian, Xiao; Azpurua, Jorge; Ke, Zhonghe; Augereau, Adeline; Zhang, Zhengdong D; Vijg, Jan; Gladyshev, Vadim N; Gorbunova, Vera; Seluanov, AndreiProceedings of the National Academy of Sciences of the United States of America.2015 Jan 27;1053-825550505
The influence of promoter architectures and regulatory motifs on gene expression in Escherichia coli.Rydenfelt, Mattias; Garcia, Hernan G; Cox 3rd, Robert Sidney; Phillips, RobPloS one.2014;e11434725549361
Optogenetic activation of cholinergic neurons in the PPT or LDT induces REM sleep.Van Dort, Christa J; Zachs, Daniel P; Kenny, Jonathan D; Zheng, Shu; Goldblum, Rebecca R; Gelwan, Noah A; Ramos, Daniel M; Nolan, Michael A; Wang, Karen; Weng, Feng-Ju; Lin, Yingxi; Wilson, Matthew A; Brown, Emery NProceedings of the National Academy of Sciences of the United States of America.2015 Jan 13;584-925548191
Intracellular expression of camelid single-domain antibodies specific for influenza virus nucleoprotein uncovers distinct features of its nuclear localization.Ashour, Joseph; Schmidt, Florian I; Hanke, Leo; Cragnolini, Juanjo; Cavallari, Marco; Altenburg, Arwen; Brewer, Rebeccah; Ingram, Jessica; Shoemaker, Charles; Ploegh, Hidde LJournal of virology.2015 Mar;2792-80025540369
Time-reversed adapted-perturbation (TRAP) optical focusing onto dynamic objects inside scattering media.Ma, Cheng; Xu, Xiao; Liu, Yan; Wang, Lihong VNature photonics.2014 Dec;931-93625530797
Deficiency of the 15-kDa selenoprotein led to cytoskeleton remodeling and non-apoptotic membrane blebbing through a RhoA/ROCK pathway.Bang, Jeyoung; Jang, Mihyun; Huh, Jang Hoe; Na, Ji-Woon; Shim, Myoungsup; Carlson, Bradley A; Tobe, Ryuta; Tsuji, Petra A; Gladyshev, Vadim N; Hatfield, Dolph L; Lee, Byeong JaeBiochemical and biophysical research communications.2015 Jan 24;884-9025529450
Promoter architecture dictates cell-to-cell variability in gene expression.Jones, Daniel L; Brewster, Robert C; Phillips, RobScience (New York, N.Y.).2014 Dec 19;1533-625525251
Association of assisted reproductive technology (ART) treatment and parental infertility diagnosis with autism in ART-conceived children.Kissin, D M; Zhang, Y; Boulet, S L; Fountain, C; Bearman, P; Schieve, L; Yeargin-Allsopp, M; Jamieson, D JHuman reproduction (Oxford, England).2015 Feb;454-6525518976
GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases.Tsai, Shengdar Q; Zheng, Zongli; Nguyen, Nhu T; Liebers, Matthew; Topkar, Ved V; Thapar, Vishal; Wyvekens, Nicolas; Khayter, Cyd; Iafrate, A John; Le, Long P; Aryee, Martin J; Joung, J KeithNature biotechnology.2015 Feb;187-9725513782
A self-assembling lanthanide molecular nanoparticle for optical imaging.Brown, Katherine A; Yang, Xiaoping; Schipper, Desmond; Hall, Justin W; DePue, Lauren J; Gnanam, Annie J; Arambula, Jonathan F; Jones, Jessica N; Swaminathan, Jagannath; Dieye, Yakhya; Vadivelu, Jamuna; Chandler, Don J; Marcotte, Edward M; Sessler, Jonathan L; Ehrlich, Lauren I R; Jones, Richard ADalton transactions (Cambridge, England : 2003).2015 Feb 14;2667-7525512085
Disrupted calcium release as a mechanism for atrial alternans associated with human atrial fibrillation.Chang, Kelly C; Bayer, Jason D; Trayanova, Natalia APLoS computational biology.2014 Dec;e100401125501557
High-resolution sequencing and modeling identifies distinct dynamic RNA regulatory strategies.Rabani, Michal; Raychowdhury, Raktima; Jovanovic, Marko; Rooney, Michael; Stumpo, Deborah J; Pauli, Andrea; Hacohen, Nir; Schier, Alexander F; Blackshear, Perry J; Friedman, Nir; Amit, Ido; Regev, AvivCell.2014 Dec 18;1698-71025497548
Methylation-dependent acyl transfer between polyketide synthase and nonribosomal peptide synthetase modules in fungal natural product biosynthesis.Zou, Yi; Xu, Wei; Tsunematsu, Yuta; Tang, Mancheng; Watanabe, Kenji; Tang, YiOrganic letters.2014 Dec 19;6390-325494235
Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex.Konermann, Silvana; Brigham, Mark D; Trevino, Alexandro E; Joung, Julia; Abudayyeh, Omar O; Barcena, Clea; Hsu, Patrick D; Habib, Naomi; Gootenberg, Jonathan S; Nishimasu, Hiroshi; Nureki, Osamu; Zhang, FengNature.2015 Jan 29;583-825494202
Imaging intracellular Ca²? signals in striatal astrocytes from adult mice using genetically-encoded calcium indicators.Jiang, Ruotian; Haustein, Martin D; Sofroniew, Michael V; Khakh, Baljit SJournal of visualized experiments : JoVE.2014;e5197225490346
Myocardial infarct segmentation and reconstruction from 2D late-gadolinium enhanced magnetic resonance images.Ukwatta, Eranga; Yuan, Jing; Qiu, Wu; Wu, Katherine C; Trayanova, Natalia; Vadakkumpadan, FijoyMedical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention.2014;554-6125485423
Stimuli-Responsive Materials for Controlled Release of Theranostic Agents.Wang, Yucai; Shim, Min Suk; Levinson, Nathanael S; Sung, Hsing-Wen; Xia, YounanAdvanced functional materials.2014 Jul 16;4206-422025477774
Decreased H3K27 and H3K4 trimethylation on mortal chromosomes in distributed stem cells.Huh, Y H; Sherley, J LCell death & disease.2014;e155425476902
IL-18 is not therapeutic for neovascular age-related macular degeneration.Hirano, Yoshio; Yasuma, Tetsuhiro; Mizutani, Takeshi; Fowler, Benjamin J; Tarallo, Valeria; Yasuma, Reo; Kim, Younghee; Bastos-Carvalho, Ana; Kerur, Nagaraj; Gelfand, Bradley D; Bogdanovich, Sasha; He, Shikun; Zhang, Xiaohui; Nozaki, Miho; Ijima, Ryo; Kaneko, Hiroki; Ogura, Yuichiro; Terasaki, Hiroko; Nagai, Hiroshi; Haro, Isao; Núñez, Gabriel; Ambati, Balamurali K; Hinton, David R; Ambati, JayakrishnaNature medicine.2014 Dec;1372-525473914
Single-shot compressed ultrafast photography at one hundred billion frames per second.Gao, Liang; Liang, Jinyang; Li, Chiye; Wang, Lihong VNature.2014 Dec 4;74-725471883
Deconstructing transcriptional heterogeneity in pluripotent stem cells.Kumar, Roshan M; Cahan, Patrick; Shalek, Alex K; Satija, Rahul; DaleyKeyser, A Jay; Li, Hu; Zhang, Jin; Pardee, Keith; Gennert, David; Trombetta, John J; Ferrante, Thomas C; Regev, Aviv; Daley, George Q; Collins, James JNature.2014 Dec 4;56-6125471879
Biodistribution and in vivo toxicity of aptamer-loaded gold nanostars.Dam, Duncan Hieu M; Culver, Kayla S B; Kandela, Irawati; Lee, Raymond C; Chandra, Kavita; Lee, Hyojin; Mantis, Christine; Ugolkov, Andrey; Mazar, Andrew P; Odom, Teri WNanomedicine : nanotechnology, biology, and medicine.2015 Apr;671-925461281
''Beauty is a light in the heart'': the transformative potential of optogenetics for clinical applications in cardiovascular medicine.Boyle, Patrick M; Karathanos, Thomas V; Trayanova, Natalia ATrends in cardiovascular medicine.2015 Feb;73-8125453984
The Effects of Stress Exposure on Prefrontal Cortex: Translating Basic Research into Successful Treatments for Post-Traumatic Stress Disorder.Arnsten, Amy F T; Raskind, Murray A; Taylor, Fletcher B; Connor, Daniel FNeurobiology of stress.2015 Jan 1;89-9925436222
Facile characterization of aptamer kinetic and equilibrium binding properties using surface plasmon resonance.Chang, Andrew L; McKeague, Maureen; Smolke, Christina DMethods in enzymology.2014;451-6625432760
Disruption of thalamic functional connectivity is a neural correlate of dexmedetomidine-induced unconsciousness.Akeju, Oluwaseun; Loggia, Marco L; Catana, Ciprian; Pavone, Kara J; Vazquez, Rafael; Rhee, James; Contreras Ramirez, Violeta; Chonde, Daniel B; Izquierdo-Garcia, David; Arabasz, Grae; Hsu, Shirley; Habeeb, Kathleen; Hooker, Jacob M; Napadow, Vitaly; Brown, Emery N; Purdon, Patrick LeLife.2014;e0449925432022
Exploring susceptibility to atrial and ventricular arrhythmias resulting from remodeling of the passive electrical properties in the heart: a simulation approach.Trayanova, Natalia A; Boyle, Patrick M; Arevalo, Hermenegild J; Zahid, SohailFrontiers in physiology.2014;43525429272
Frequency-swept time-reversed ultrasonically encoded optical focusing.Suzuki, Yuta; Wang, Lihong VApplied physics letters.2014 Nov 10;19110825425744
Directed evolution of APEX2 for electron microscopy and proximity labeling.Lam, Stephanie S; Martell, Jeffrey D; Kamer, Kimberli J; Deerinck, Thomas J; Ellisman, Mark H; Mootha, Vamsi K; Ting, Alice YNature methods.2015 Jan;51-425419960
Imaging changes in the cytosolic ATP-to-ADP ratio.Tantama, Mathew; Yellen, GaryMethods in enzymology.2014;355-7125416365
Nucleoside reverse transcriptase inhibitors possess intrinsic anti-inflammatory activity.Fowler, Benjamin J; Gelfand, Bradley D; Kim, Younghee; Kerur, Nagaraj; Tarallo, Valeria; Hirano, Yoshio; Amarnath, Shoba; Fowler, Daniel H; Radwan, Marta; Young, Mark T; Pittman, Keir; Kubes, Paul; Agarwal, Hitesh K; Parang, Keykavous; Hinton, David R; Bastos-Carvalho, Ana; Li, Shengjian; Yasuma, Tetsuhiro; Mizutani, Takeshi; Yasuma, Reo; Wright, Charles; Ambati, JayakrishnaScience (New York, N.Y.).2014 Nov 21;1000-325414314
Constructing cities, deconstructing scaling laws.Arcaute, Elsa; Hatna, Erez; Ferguson, Peter; Youn, Hyejin; Johansson, Anders; Batty, MichaelJournal of the Royal Society, Interface / the Royal Society.2015 Jan 6;2014074525411405
The transcriptome of the bowhead whale Balaena mysticetus reveals adaptations of the longest-lived mammal.Seim, Inge; Ma, Siming; Zhou, Xuming; Gerashchenko, Maxim V; Lee, Sang-Goo; Suydam, Robert; George, John C; Bickham, John W; Gladyshev, Vadim NAging.2014 Oct;879-9925411232
Photoacoustic lymphatic imaging with high spatial-temporal resolution.Martel, Catherine; Yao, Junjie; Huang, Chih-Hsien; Zou, Jun; Randolph, Gwendalyn J; Wang, Lihong VJournal of biomedical optics.2014 Nov;11600925408958
Topoisomerase 1 inhibition reversibly impairs synaptic function.Mabb, Angela M; Kullmann, Paul H M; Twomey, Margaret A; Miriyala, Jayalakshmi; Philpot, Benjamin D; Zylka, Mark JProceedings of the National Academy of Sciences of the United States of America.2014 Dec 2;17290-525404338
Tunable protein degradation in bacteria.Cameron, D Ewen; Collins, James JNature biotechnology.2014 Dec;1276-8125402616
Photoacoustic Brain Imaging: from Microscopic to Macroscopic Scales.Yao, Junjie; Wang, Lihong VNeurophotonics.2014 May 28;25401121
Genome engineering with custom recombinases.Gaj, Thomas; Barbas 3rd, Carlos FMethods in enzymology.2014;79-9125398336
A Drosophila toolkit for the visualization and quantification of viral replication launched from transgenic genomes.Wernet, Mathias F; Klovstad, Martha; Clandinin, Thomas RPloS one.2014;e11209225386852
Breakthrough in Photonics 2013: Photoacoustic Tomography in Biomedicine.Yao, Junjie; Wang, Lihong VIEEE photonics journal.2014 Apr;25383143
Grueneisen relaxation photoacoustic microscopy.Wang, Lidai; Zhang, Chi; Wang, Lihong VPhysical review letters.2014 Oct 24;17430125379919
Pupil fluctuations track fast switching of cortical states during quiet wakefulness.Reimer, Jacob; Froudarakis, Emmanouil; Cadwell, Cathryn R; Yatsenko, Dimitri; Denfield, George H; Tolias, Andreas SNeuron.2014 Oct 22;355-6225374359
Cell intrinsic modulation of Wnt signaling controls neuroblast migration in C. elegans.Mentink, Remco A; Middelkoop, Teije C; Rella, Lorenzo; Ji, Ni; Tang, Chung Yin; Betist, Marco C; van Oudenaarden, Alexander; Korswagen, Hendrik CDevelopmental cell.2014 Oct 27;188-20125373777
Dominant drug targets suppress the emergence of antiviral resistance.Tanner, Elizabeth J; Liu, Hong-mei; Oberste, M Steven; Pallansch, Mark; Collett, Marc S; Kirkegaard, KarlaeLife.2014;25365453
Optogenetics-enabled dynamic modulation of action potential duration in atrial tissue: feasibility of a novel therapeutic approach.Karathanos, Thomas V; Boyle, Patrick M; Trayanova, Natalia AEuropace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology.2014 Nov;iv69-iv7625362173
One-step enzymatic modification of the cell surface redirects cellular cytotoxicity and parasite tropism.Swee, Lee Kim; Lourido, Sebastian; Bell, George W; Ingram, Jessica R; Ploegh, Hidde LACS chemical biology.2015 Feb 20;460-525360987
Amplitude-masked photoacoustic wavefront shaping and application in flowmetry.Tay, Jian Wei; Liang, Jinyang; Wang, Lihong VOptics letters.2014 Oct 1;5499-50225360912
DICER1/Alu RNA dysmetabolism induces Caspase-8-mediated cell death in age-related macular degeneration.Kim, Younghee; Tarallo, Valeria; Kerur, Nagaraj; Yasuma, Tetsuhiro; Gelfand, Bradley D; Bastos-Carvalho, Ana; Hirano, Yoshio; Yasuma, Reo; Mizutani, Takeshi; Fowler, Benjamin J; Li, Shengjian; Kaneko, Hiroki; Bogdanovich, Sasha; Ambati, Balamurali K; Hinton, David R; Hauswirth, William W; Hakem, Razqallah; Wright, Charles; Ambati, JayakrishnaProceedings of the National Academy of Sciences of the United States of America.2014 Nov 11;16082-725349431
The rate of osmotic downshock determines the survival probability of bacterial mechanosensitive channel mutants.Bialecka-Fornal, Maja; Lee, Heun Jin; Phillips, RobJournal of bacteriology.2015 Jan 1;231-725349158
Cell-based reporters reveal in vivo dynamics of dopamine and norepinephrine release in murine cortex.Muller, Arnaud; Joseph, Victory; Slesinger, Paul A; Kleinfeld, DavidNature methods.2014 Dec;1245-5225344639
Germs are germs, and why not take a risk? Patients' expectations for prescribing antibiotics in an inner-city emergency department.Broniatowski, David A; Klein, Eili Y; Reyna, Valerie FMedical decision making : an international journal of the Society for Medical Decision Making.2015 Jan;60-725331913
In vivo interrogation of gene function in the mammalian brain using CRISPR-Cas9.Swiech, Lukasz; Heidenreich, Matthias; Banerjee, Abhishek; Habib, Naomi; Li, Yinqing; Trombetta, John; Sur, Mriganka; Zhang, FengNature biotechnology.2015 Jan;102-625326897
Drugging the undruggable RAS: Mission possible?Cox, Adrienne D; Fesik, Stephen W; Kimmelman, Alec C; Luo, Ji; Der, Channing JNature reviews. Drug discovery.2014 Nov;828-5125323927
Computational design of a red fluorophore ligase for site-specific protein labeling in living cells.Liu, Daniel S; Nivon, Lucas G; Richter, Florian; Goldman, Peter J; Deerinck, Thomas J; Yao, Jennifer Z; Richardson, Douglas; Phipps, William S; Ye, Anne Z; Ellisman, Mark H; Drennan, Catherine L; Baker, David; Ting, Alice YProceedings of the National Academy of Sciences of the United States of America.2014 Oct 28;E4551-925313043
Directional interactions and cooperativity between mechanosensitive membrane proteins.Haselwandter, Christoph A; Phillips, RobEurophysics letters.2013 Mar;68002p1-68002p625309021
Identification of Orai1 channel inhibitors by using minimal functional domains to screen small molecule microarrays.Sadaghiani, Amir Masoud; Lee, Sang Min; Odegaard, Justin I; Leveson-Gower, Dennis B; McPherson, Olivia M; Novick, Paul; Kim, Mi Ri; Koehler, Angela N; Negrin, Robert; Dolmetsch, Ricardo E; Park, Chan YoungChemistry & biology.2014 Oct 23;1278-9225308275
O-GlcNAc transferase enables AgRP neurons to suppress browning of white fat.Ruan, Hai-Bin; Dietrich, Marcelo O; Liu, Zhong-Wu; Zimmer, Marcelo R; Li, Min-Dian; Singh, Jay Prakash; Zhang, Kaisi; Yin, Ruonan; Wu, Jing; Horvath, Tamas L; Yang, XiaoyongCell.2014 Oct 9;306-1725303527
Sensitivity of photoacoustic microscopy.Yao, Junjie; Wang, Lihong VPhotoacoustics.2014 Jun;87-10125302158
Design and characterization of structured protein linkers with differing flexibilities.Klein, Joshua S; Jiang, Siduo; Galimidi, Rachel P; Keeffe, Jennifer R; Bjorkman, Pamela JProtein engineering, design & selection : PEDS.2014 Oct;325-3025301959
Biophysical Modeling of Alpha Rhythms During Halothane-Induced Unconsciousness.Vijayan, Sujith; Ching, ShiNung; Purdon, Patrick L; Brown, Emery N; Kopell, Nancy JInternational IEEE/EMBS Conference on Neural Engineering : [proceedings]. International IEEE EMBS Conference on Neural Engineering.2013;1104-110725284633
Lanthanide nano-drums: a new class of molecular nanoparticles for potential biomedical applications.Jones, Richard A; Gnanam, Annie J; Arambula, Jonathan F; Jones, Jessica N; Swaminathan, Jagannath; Yang, Xiaoping; Schipper, Desmond; Hall, Justin W; DePue, Lauren J; Dieye, Yakhya; Vadivelu, Jamuna; Chandler, Don J; Marcotte, Edward M; Sessler, Jonathan L; Ehrlich, Lauren I R; Brown, Katherine AFaraday discussions.2014;241-5525284181
Posttranscriptional regulation of gene expression by Piwi proteins and piRNAs.Watanabe, Toshiaki; Lin, HaifanMolecular cell.2014 Oct 2;18-2725280102
Protein-responsive ribozyme switches in eukaryotic cells.Kennedy, Andrew B; Vowles, James V; d'Espaux, Leo; Smolke, Christina DNucleic acids research.2014 Oct 29;12306-2125274734
Modulation depth estimation and variable selection in state-space models for neural interfaces.Malik, Wasim Q; Hochberg, Leigh R; Donoghue, John P; Brown, Emery NIEEE transactions on bio-medical engineering.2015 Feb;570-8125265627
CRISPR-Cas9 knockin mice for genome editing and cancer modeling.Platt, Randall J; Chen, Sidi; Zhou, Yang; Yim, Michael J; Swiech, Lukasz; Kempton, Hannah R; Dahlman, James E; Parnas, Oren; Eisenhaure, Thomas M; Jovanovic, Marko; Graham, Daniel B; Jhunjhunwala, Siddharth; Heidenreich, Matthias; Xavier, Ramnik J; Langer, Robert; Anderson, Daniel G; Hacohen, Nir; Regev, Aviv; Feng, Guoping; Sharp, Phillip A; Zhang, FengCell.2014 Oct 9;440-5525263330
The ins and outs of viral infection: keystone meeting review.Bird, Sara W; Kirkegaard, Karla; Agbandje-McKenna, Mavis; Freed, Eric OViruses.2014 Sep;3652-6225256395
Effects of sevoflurane and propofol on frontal electroencephalogram power and coherence.Akeju, Oluwaseun; Westover, M Brandon; Pavone, Kara J; Sampson, Aaron L; Hartnack, Katharine E; Brown, Emery N; Purdon, Patrick LAnesthesiology.2014 Nov;990-825233374
Designing tools for assumption-proof brain mapping.Marblestone, Adam H; Boyden, Edward SNeuron.2014 Sep 17;1239-4125233303
A system for multilocus chromosomal integration and transformation-free selection marker rescue.Siddiqui, Michael S; Choksi, Atri; Smolke, Christina DFEMS yeast research.2014 Dec;1171-8525226817
Microvascular quantification based on contour-scanning photoacoustic microscopy.Yeh, Chenghung; Soetikno, Brian; Hu, Song; Maslov, Konstantin I; Wang, Lihong VJournal of biomedical optics.2014 Sep;9601125223708
Joint cross-correlation analysis reveals complex, time-dependent functional relationship between cortical neurons and arm electromyograms.Zhuang, Katie Z; Lebedev, Mikhail A; Nicolelis, Miguel A LJournal of neurophysiology.2014 Dec 1;2865-8725210153
Ex vivo Expansion of Human Adult Pancreatic Cells with Properties of Distributed Stem Cells by Suppression of Asymmetric Cell Kinetics.Pare, Jf; Sherley, JlJournal of stem cell research & therapy.2013 Sep;14925197614
The mechanics of PLGA nanofiber scaffolds with biomimetic gradients in mineral for tendon-to-bone repair.Lipner, J; Liu, W; Liu, Y; Boyle, J; Genin, G M; Xia, Y; Thomopoulos, SJournal of the mechanical behavior of biomedical materials.2014 Dec;59-6825194525
A comparison of propofol- and dexmedetomidine-induced electroencephalogram dynamics using spectral and coherence analysis.Akeju, Oluwaseun; Pavone, Kara J; Westover, M Brandon; Vazquez, Rafael; Prerau, Michael J; Harrell, Priscilla G; Hartnack, Katharine E; Rhee, James; Sampson, Aaron L; Habeeb, Kathleen; Gao, Lei; Lei, Gao; Pierce, Eric T; Walsh, John L; Brown, Emery N; Purdon, Patrick LAnesthesiology.2014 Nov;978-8925187999
Biosynthesis of fungal indole alkaloids.Xu, Wei; Gavia, Diego J; Tang, YiNatural product reports.2014 Oct;1474-8725180619
Levels of circulating myeloid subpopulations and of heme oxygenase-1 do not predict CD4(+) T cell recovery after the initiation of antiretroviral therapy for HIV disease.Seu, Lillian; Ortiz, Gabriel M; Burt, Trevor D; Deeks, Steven G; Martin, Jeffrey N; McCune, Joseph MAIDS research and therapy.2014;2725180041
Adaptations to a subterranean environment and longevity revealed by the analysis of mole rat genomes.Fang, Xiaodong; Seim, Inge; Huang, Zhiyong; Gerashchenko, Maxim V; Xiong, Zhiqiang; Turanov, Anton A; Zhu, Yabing; Lobanov, Alexei V; Fan, Dingding; Yim, Sun Hee; Yao, Xiaoming; Ma, Siming; Yang, Lan; Lee, Sang-Goo; Kim, Eun Bae; Bronson, Roderick T; ?umbera, Radim; Buffenstein, Rochelle; Zhou, Xin; Krogh, Anders; Park, Thomas J; Zhang, Guojie; Wang, Jun; Gladyshev, Vadim NCell reports.2014 Sep 11;1354-6425176646
CD39 and CD161 modulate Th17 responses in Crohn's disease.Bai, Aiping; Moss, Alan; Kokkotou, Efi; Usheva, Anny; Sun, Xiaofeng; Cheifetz, Adam; Zheng, Yi; Longhi, Maria Serena; Gao, Wenda; Wu, Yan; Robson, Simon CJournal of immunology (Baltimore, Md. : 1950).2014 Oct 1;3366-7725172498
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CANDO and the infinite drug discovery frontier.Minie, Mark; Chopra, Gaurav; Sethi, Geetika; Horst, Jeremy; White, George; Roy, Ambrish; Hatti, Kaushik; Samudrala, RamDrug discovery today2014 Jun 26NULL24980786
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Protein capsules with cross-linked, semipermeable, and enzyme-degradable surface barriers for controlled release.Zhou, Jianhua; Hyun, Dong Choon; Liu, Hang; Wu, Hongkai; Xia, YounanMacromolecular rapid communications.2014 Aug;1436-4224957975
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Genome-wide identification and functional analysis of Apobec-1 mediated C-to-U RNA editing in mouse small intestine and liver.Blanc, Valerie; Park, Eddie; Schaefer, Sabine; Miller, Melanie; Lin, Yiing; Kennedy, Susan; Billing, Anja M; Ben Hamidane, Hisham; Graumann, Johannes; Mortazavi, Ali; Nadeau, Joseph H; Davidson, Nicholas OGenome biology2014 Jun 19R7924946870
Elucidation of pseurotin biosynthetic pathway points to trans-acting C-methyltransferase: generation of chemical diversity.Tsunematsu, Yuta; Fukutomi, Manami; Saruwatari, Takayoshi; Noguchi, Hiroshi; Hotta, Kinya; Tang, Yi; Watanabe, KenjiAngewandte Chemie (International ed. in English).2014 Aug 4;8475-924939566
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Shh-proteoglycan interactions regulate maturation of olfactory glomerular circuitry.Persson, Laura; Witt, Rochelle M; Galligan, Meghan; Greer, Paul L; Eisner, Adriana; Pazyra-Murphy, Maria F; Datta, Sandeep R; Segal, Rosalind ADevelopmental neurobiology2014 Jun 10NULL24913191
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Gender moderates the effect of oxytocin on social judgments.Hoge, Elizabeth A; Anderson, Eric; Lawson, Elizabeth A; Bui, Eric; Fischer, Laura E; Khadge, Shradha D; Barrett, Lisa Feldman; Simon, Naomi MHuman psychopharmacology2014 May299-30424911580
Eosinophils and type 2 cytokine signaling in macrophages orchestrate development of functional beige fat.Qiu, Yifu; Nguyen, Khoa D; Odegaard, Justin I; Cui, Xiaojin; Tian, Xiaoyu; Locksley, Richard M; Palmiter, Richard D; Chawla, AjayCell2014 Jun 51292-30824906148
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Measuring Fate and Rate of Single-Molecule Competition of Amplification and Restriction Digestion, and Its Use for Rapid Genotyping Tested with Hepatitis C Viral RNA.Sun, Bing; Rodriguez-Manzano, Jesus; Selck, David A; Khorosheva, Eugenia; Karymov, Mikhail A; Ismagilov, Rustem FAngewandte Chemie (International ed. in English)2014 Jun 2NULL24889060
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Leptin signaling in astrocytes regulates hypothalamic neuronal circuits and feeding.Kim, Jae Geun; Suyama, Shigetomo; Koch, Marco; Jin, Sungho; Argente-Arizon, Pilar; Argente, Jesus; Liu, Zhong-Wu; Zimmer, Marcelo R; Jeong, Jin Kwon; Szigeti-Buck, Klara; Gao, Yuanqing; Garcia-Caceres, Cristina; Yi, Chun-Xia; Salmaso, Natalina; Vaccarino,Nature neuroscience2014 Jul908-1024880214
Synthetic zinc finger proteins: the advent of targeted gene regulation and genome modification technologies.Gersbach, Charles A; Gaj, Thomas; Barbas 3rd, Carlos FAccounts of chemical research.2014 Aug 19;2309-1824877793
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Two-photon neuronal and astrocytic stimulation with azobenzene-based photoswitches.Izquierdo-Serra, Mercè; Gascón-Moya, Marta; Hirtz, Jan J; Pittolo, Silvia; Poskanzer, Kira E; Ferrer, Èric; Alibés, Ramon; Busqué, Félix; Yuste, Rafael; Hernando, Jordi; Gorostiza, PauJournal of the American Chemical Society.2014 Jun 18;8693-70124857186
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Fungal Polyketide Synthase Product Chain-Length Control by Partnering Thiohydrolase.Zabala, Angelica O; Chooi, Yit-Heng; Choi, Moon Seok; Lin, Hsiao-Ching; Tang, YiACS chemical biology2014 May 29NULL24845309
Astrocytes and Huntington's disease.Khakh, Baljit S; Sofroniew, Michael VACS chemical neuroscience.2014 Jul 16;494-624842291
A carbonate-forming Baeyer-Villiger monooxygenase.Hu, Youcai; Dietrich, David; Xu, Wei; Patel, Ashay; Thuss, Justin A J; Wang, Jingjing; Yin, Wen-Bing; Qiao, Kangjian; Houk, K N; Vederas, John C; Tang, YiNature chemical biology2014 May 18NULL24838010
Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy.Prevedel, Robert; Yoon, Young-Gyu; Hoffmann, Maximilian; Pak, Nikita; Wetzstein, Gordon; Kato, Saul; Schrodel, Tina; Raskar, Ramesh; Zimmer, Manuel; Boyden, Edward S; Vaziri, AlipashaNature methods2014 May 18NULL24836920
Gender differences in oxytocin-associated disruption of decision bias during emotion perception.Lynn, Spencer K; Hoge, Elizabeth A; Fischer, Laura E; Barrett, Lisa Feldman; Simon, Naomi MPsychiatry research2014 Apr 26NULL24814142
Walking Drosophila align with the e-vector of linearly polarized light through directed modulation of angular acceleration.Velez, Mariel M; Wernet, Mathias F; Clark, Damon A; Clandinin, Thomas RJournal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology2014 Jun603-1424810784
Nerve guidance conduits based on double-layered scaffolds of electrospun nanofibers for repairing the peripheral nervous system.Xie, Jingwei; MacEwan, Matthew R; Liu, Wenying; Jesuraj, Nithya; Li, Xiaoran; Hunter, Daniel; Xia, YounanACS applied materials & interfaces2014 Jun 259472-8024806389
Antibiotics induce redox-related physiological alterations as part of their lethality.Dwyer, Daniel J; Belenky, Peter A; Yang, Jason H; MacDonald, I Cody; Martell, Jeffrey D; Takahashi, Noriko; Chan, Clement T Y; Lobritz, Michael A; Braff, Dana; Schwarz, Eric G; Ye, Jonathan D; Pati, Mekhala; Vercruysse, Maarten; Ralifo, Paul S; Allison, KProceedings of the National Academy of Sciences of the United States of America2014 May 20E2100-924803433
New insights into defibrillation of the heart from realistic simulation studies.Trayanova, Natalia A; Rantner, Lukas JEuropace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology.2014 May;705-1324798960
Loss of *-catenin triggers oxidative stress and impairs hematopoietic regeneration.Lento, William; Ito, Takahiro; Zhao, Chen; Harris, Jeffrey R; Huang, Wei; Jiang, Chen; Owzar, Kouros; Piryani, Sadhna; Racioppi, Luigi; Chao, Nelson; Reya, TannishthaGenes & development2014 May 1995-100424788518
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Inter-individual variation in DNA repair capacity: A need for multi-pathway functional assays to promote translational DNA repair research.Nagel, Zachary D; Chaim, Isaac A; Samson, Leona DDNA repair2014 Apr 26NULL24780560
Somatic mutation as a mechanism of Wnt/*-catenin pathway activation in CLL.Wang, Lili; Shalek, Alex K; Lawrence, Mike; Ding, Ruihua; Gaublomme, Jellert T; Pochet, Nathalie; Stojanov, Petar; Sougnez, Carrie; Shukla, Sachet A; Stevenson, Kristen E; Zhang, Wandi; Wong, Jessica; Sievers, Quinlan L; MacDonald, Bryan T; Vartanov, Alexander R; Goldstein, Natalie R; Neuberg, Donna; He, Xi; Lander, Eric; Hacohen, Nir; Regev, Aviv; Getz, Gad; Brown, Jennifer R; Park, Hongkun; Wu, Catherine JBlood.2014 Aug 14;1089-9824778153
Chronic, wireless recordings of large-scale brain activity in freely moving rhesus monkeys.Schwarz, David A; Lebedev, Mikhail A; Hanson, Timothy L; Dimitrov, Dragan F; Lehew, Gary; Meloy, Jim; Rajangam, Sankaranarayani; Subramanian, Vivek; Ifft, Peter J; Li, Zheng; Ramakrishnan, Arjun; Tate, Andrew; Zhuang, Katie Z; Nicolelis, Miguel A LNature methods2014 Jun670-624776634
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Dimeric CRISPR RNA-guided FokI nucleases for highly specific genome editing.Tsai, Shengdar Q; Wyvekens, Nicolas; Khayter, Cyd; Foden, Jennifer A; Thapar, Vishal; Reyon, Deepak; Goodwin, Mathew J; Aryee, Martin J; Joung, J KeithNature biotechnology2014 Jun569-7624770325
Constant growth rate can be supported by decreasing energy flux and increasing aerobic glycolysis.Slavov, Nikolai; Budnik, Bogdan A; Schwab, David; Airoldi, Edoardo M; van Oudenaarden, AlexanderCell reports2014 May 8705-1424767987
A PKA activity sensor for quantitative analysis of endogenous GPCR signaling via 2-photon FRET-FLIM imaging.Chen, Yao; Saulnier, Jessica L; Yellen, Gary; Sabatini, Bernardo LFrontiers in pharmacology20145624765076
Mathematical approaches to understanding and imaging atrial fibrillation: significance for mechanisms and management.Trayanova, Natalia ACirculation research.2014 Apr 25;1516-3124763468
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Imaging neural spiking in brain tissue using FRET-opsin protein voltage sensors.Gong, Yiyang; Wagner, Mark J; Zhong Li, Jin; Schnitzer, Mark JNature communications2014367424755708
Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells.Wu, Xuebing; Scott, David A; Kriz, Andrea J; Chiu, Anthony C; Hsu, Patrick D; Dadon, Daniel B; Cheng, Albert W; Trevino, Alexandro E; Konermann, Silvana; Chen, Sidi; Jaenisch, Rudolf; Zhang, Feng; Sharp, Phillip ANature biotechnology.2014 Jul;670-624752079
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Small-molecule RORýýt antagonists inhibit T helper 17 cell transcriptional network by divergent mechanisms.Xiao, Sheng; Yosef, Nir; Yang, Jianfei; Wang, Yonghui; Zhou, Ling; Zhu, Chen; Wu, Chuan; Baloglu, Erkan; Schmidt, Darby; Ramesh, Radha; Lobera, Mercedes; Sundrud, Mark S; Tsai, Pei-Yun; Xiang, Zhijun; Wang, Jinsong; Xu, Yan; Lin, Xichen; Kretschmer, KarstImmunity2014 Apr 17477-8924745332
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Calibration-free structured-illumination photoacoustic flowgraphy of transverse flow in scattering media.Yao, Junjie; Gilson, Rebecca C; Maslov, Konstantin I; Wang, Lidai; Wang, Lihong VJournal of biomedical optics2014 Apr4600724718385
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Comparison of the theoretical and real-world evolutionary potential of a genetic circuit.Razo-Mejia, M; Boedicker, J Q; Jones, D; Deluna, A; Kinney, J B; Phillips, RPhysical biology2014 Apr2600524685590
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Using SV119-Gold Nanocage Conjugates to Eradicate Cancer Stem Cells Through a Combination of Photothermal and Chemo Therapies.Sun, Tianmeng; Wang, Yi; Wang, Yucai; Xu, Jinbin; Zhao, Xin; Vangveravong, Suwanna; Mach, Robert H; Xia, YounanAdvanced healthcare materials2014 Mar 26NULL24677807
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Genetically encoded molecular probes to visualize and perturb signaling dynamics in living biological systems.Sample, Vedangi; Mehta, Sohum; Zhang, JinJournal of cell science2014 Mar 151151-6024634506
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Recasting the theory of mosquito-borne pathogen transmission dynamics and control.Smith, David L; Perkins, T Alex; Reiner Jr, Robert C; Barker, Christopher M; Niu, Tianchan; Chaves, Luis Fernando; Ellis, Alicia M; George, Dylan B; Le Menach, Arnaud; Pulliam, Juliet R C; Bisanzio, Donal; Buckee, Caroline; Chiyaka, Christinah; Cummings, Transactions of the Royal Society of Tropical Medicine and Hygiene2014 Apr185-9724591453
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A general framework for estimating the relative pathogenicity of human genetic variants.Kircher, Martin; Witten, Daniela M; Jain, Preti; O'Roak, Brian J; Cooper, Gregory M; Shendure, JayNature genetics2014 Mar310-524487276
Lis1 regulates asymmetric division in hematopoietic stem cells and in leukemia.Zimdahl, Bryan; Ito, Takahiro; Blevins, Allen; Bajaj, Jeevisha; Konuma, Takaaki; Weeks, Joi; Koechlein, Claire S; Kwon, Hyog Young; Arami, Omead; Rizzieri, David; Broome, H Elizabeth; Chuah, Charles; Oehler, Vivian G; Sasik, Roman; Hardiman, Gary; Reya, TNature genetics2014 Mar245-5224487275
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Spin models inferred from patient-derived viral sequence data faithfully describe HIV fitness landscapes.Shekhar, Karthik; Ruberman, Claire F; Ferguson, Andrew L; Barton, John P; Kardar, Mehran; Chakraborty, Arup KPhysical review. E, Statistical, nonlinear, and soft matter physics.2013 Dec;6270524483484
Long term stability of nanowire nanoelectronics in physiological environments.Zhou, Wei; Dai, Xiaochuan; Fu, Tian-Ming; Xie, Chong; Liu, Jia; Lieber, Charles MNano letters2014 Mar 121614-924479700
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Ferromagnetic nanoparticles with peroxidase-like activity enhance the cleavage of biological macromolecules for biofilm elimination.Gao, Lizeng; Giglio, Krista M; Nelson, Jacquelyn L; Sondermann, Holger; Travis, Alexander JNanoscale2014 Mar 72588-9324468900
fMRI of retina-originated phosphenes experienced by patients with leber congenital amaurosis.Ashtari, Manzar; Cyckowski, Laura; Yazdi, Alborz; Viands, Amanda; Marshall, Kathleen; Bokkon, Istvan; Maguire, Albert; Bennett, JeanPloS one2014e8606824465873
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Composition and function of T cell subpopulations are slow to change despite effective antiretroviral treatment of HIV disease.Emu, Brinda; Moretto, Walter J; Hoh, Rebecca; Krone, Melissa; Martin, Jeffrey N; Nixon, Douglas F; Deeks, Steven G; McCune, Joseph MPloS one2014e8561324465619
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Neonatal insulin action impairs hypothalamic neurocircuit formation in response to maternal high-fat feeding.Vogt, Merly C; Paeger, Lars; Hess, Simon; Steculorum, Sophie M; Awazawa, Motoharu; Hampel, Brigitte; Neupert, Susanne; Nicholls, Hayley T; Mauer, Jan; Hausen, A Christine; Predel, Reinhard; Kloppenburg, Peter; Horvath, Tamas L; Bruning, Jens CCell2014 Jan 30495-50924462248
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Chronic Spinal Cord Electrical Stimulation Protects Against 6-hydroxydopamine Lesions.Yadav, Amol P; Fuentes, Romulo; Zhang, Hao; Vinholo, Thais; Wang, Chi-Han; Freire, Marco Aurelio M; Nicolelis, Miguel A LScientific reports2014383924452435
Analysis of maternal microchimerism in rhesus monkeys (Macaca mulatta) using real-time quantitative PCR amplification of MHC polymorphisms.Bakkour, Sonia; Baker, Chris A R; Tarantal, Alice F; Wen, Li; Busch, Michael P; Lee, Tzong-Hae; McCune, Joseph MChimerism2014 Jan-Mar4180524451553
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Neurite outgrowth on electrospun nanofibers with uniaxial alignment: the effects of fiber density, surface coating, and supporting substrate.Xie, Jingwei; Liu, Wenying; MacEwan, Matthew R; Bridgman, Paul C; Xia, YounanACS nano2014 Feb 251878-8524444076
Fabrication of Cell Patches Using Biodegradable Scaffolds with a Hexagonal Array of Interconnected Pores (SHAIPs).Zhang, Yu Shrike; Yao, Junjie; Wang, Lihong V; Xia, YounanPolymer2014 Jan 14445-45224443593
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Grafting aptamers onto gold nanostars increases in vitro efficacy in a wide range of cancer cell types.Dam, Duncan Hieu M; Culver, Kayla S B; Odom, Teri WMolecular pharmaceutics2014 Feb 3580-724422969
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AMPA receptor antagonist NBQX attenuates later-life epileptic seizures and autistic-like social deficits following neonatal seizures.Lippman-Bell, Jocelyn J; Rakhade, Sanjay N; Klein, Peter M; Obeid, Makram; Jackson, Michele C; Joseph, Annelise; Jensen, Frances EEpilepsia2013 Nov1922-3224117347
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Gene Expression Profiling of a Hypoxic Seizure Model of Epilepsy Suggests a Role for mTOR and Wnt Signaling in Epileptogenesis.Theilhaber, Joachim; Rakhade, Sanjay N; Sudhalter, Judy; Kothari, Nayantara; Klein, Peter; Pollard, Jack; Jensen, Frances EPloS one2013e7442824086344
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Maternal and offspring pools of osteocalcin influence brain development and functions.Oury, Franck; Khrimian, Lori; Denny, Christine A; Gardin, Antoine; Chamouni, Alexandre; Goeden, Nick; Huang, Yung-yu; Lee, Hojoon; Srinivas, Prashanth; Gao, Xiao-Bing; Suyama, Shigetomo; Langer, Thomas; Mann, John J; Horvath, Tamas L; Bonnin, Alexandre; Karsenty, GerardCell.2013 Sep 26;228-4124074871
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Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein.Feldkamp, Michael D; Frank, Andreas O; Kennedy, J Phillip; Patrone, James D; Vangamudi, Bhavatarini; Waterson, Alex G; Fesik, Stephen W; Chazin, Walter JBiochemistry2013 Sep 176515-2423962067
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Nanoelectronics Meets Biology: From New Nanoscale Devices for Live-Cell Recording to 3D Innervated Tissues.Duan, Xiaojie; Lieber, Charles MChemistry, an Asian journal2013 Oct2304-1423946279
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Phospholipase B is activated in response to sterol removal and stimulates acrosome exocytosis in murine sperm.Asano, Atsushi; Nelson-Harrington, Jacquelyn L; Travis, Alexander JThe Journal of biological chemistry2013 Sep 2728104-1523943622
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RNA Replicon Delivery via Lipid-Complexed PRINT Protein Particles.Xu, Jing; Luft, J Christopher; Yi, Xianwen; Tian, Shaomin; Owens, Gary; Wang, Jin; Johnson, Ashley; Berglund, Peter; Smith, Jonathan; Napier, Mary E; Desimone, Joseph MMolecular pharmaceutics2013 Aug 21NULL23924216
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Calibration-free quantification of absolute oxygen saturation based on the dynamics of photoacoustic signals.Xia, Jun; Danielli, Amos; Liu, Yan; Wang, Lidai; Maslov, Konstantin; Wang, Lihong VOptics letters2013 Aug 12800-323903146
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Rapidly-dissolvable microneedle patches via a highly scalable and reproducible soft lithography approach.Moga, Katherine A; Bickford, Lissett R; Geil, Robert D; Dunn, Stuart S; Pandya, Ashish A; Wang, Yapei; Fain, John H; Archuleta, Christine F; O'Neill, Adrian T; Desimone, Joseph MAdvanced materials (Deerfield Beach, Fla.)2013 Sep 255060-623893866
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Heritable and precise zebrafish genome editing using a CRISPR-Cas system.Hwang, Woong Y; Fu, Yanfang; Reyon, Deepak; Maeder, Morgan L; Kaini, Prakriti; Sander, Jeffry D; Joung, J Keith; Peterson, Randall T; Yeh, Jing-Ruey JoannaPloS one2013e6870823874735
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Heparan sulfate proteoglycans containing a glypican 5 core and 2-O-sulfo-iduronic acid function as Sonic Hedgehog co-receptors to promote proliferation.Witt, Rochelle M; Hecht, Marie-Lyn; Pazyra-Murphy, Maria F; Cohen, Samuel M; Noti, Christian; van Kuppevelt, Toin H; Fuller, Maria; Chan, Jennifer A; Hopwood, John J; Seeberger, Peter H; Segal, Rosalind AThe Journal of biological chemistry2013 Sep 626275-8823867465
A coaxial optrode as multifunction write-read probe for optogenetic studies in non-human primates.Ozden, Ilker; Wang, Jing; Lu, Yao; May, Travis; Lee, Joonhee; Goo, Werapong; O'Shea, Daniel J; Kalanithi, Paul; Diester, Ilka; Diagne, Mohamed; Deisseroth, Karl; Shenoy, Krishna V; Nurmikko, Arto VJournal of neuroscience methods2013 Sep 30142-5423867081
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SNP ascertainment bias in population genetic analyses: why it is important, and how to correct it.Lachance, Joseph; Tishkoff, Sarah ABioEssays : news and reviews in molecular, cellular and developmental biology2013 Sep780-623836388
The developmental transcriptome of the mosquito Aedes aegypti, an invasive species and major arbovirus vector.Akbari, Omar S; Antoshechkin, Igor; Amrhein, Henry; Williams, Brian; Diloreto, Race; Sandler, Jeremy; Hay, Bruce AG3 (Bethesda, Md.)2013 Sep1493-50923833213
R-loops and nicks initiate DNA breakage and genome instability in non-growing Escherichia coli.Wimberly, Hallie; Shee, Chandan; Thornton, P C; Sivaramakrishnan, Priya; Rosenberg, Susan M; Hastings, P JNature communications2013 Jul 5211523828459
Intracellular temperature mapping with fluorescence-assisted photoacoustic-thermometry.Gao, Liang; Zhang, Chi; Li, Chiye; Wang, Lihong VApplied physics letters.2013 May 13;19370523825801
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Great ape genetic diversity and population history.Prado-Martinez, Javier; Sudmant, Peter H; Kidd, Jeffrey M; Li, Heng; Kelley, Joanna L; Lorente-Galdos, Belen; Veeramah, Krishna R; Woerner, August E; O'Connor, Timothy D; Santpere, Gabriel; Cagan, Alexander; Theunert, Christoph; Casals, Ferran; Laayouni, Nature2013 Jul 3NULL23823723
Engineering customized TALE nucleases (TALENs) and TALE transcription factors by fast ligation-based automatable solid-phase high-throughput (FLASH) assembly.Reyon, Deepak; Maeder, Morgan L; Khayter, Cyd; Tsai, Shengdar Q; Foley, Jonathan E; Sander, Jeffry D; Joung, J KeithCurrent protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.]2013 JulUnit 12.1623821439
The aging brain and anesthesia.Brown, Emery N; Purdon, Patrick LCurrent opinion in anaesthesiology2013 Aug414-923820102
The NADPH metabolic network regulates human ýýB-crystallin cardiomyopathy and reductive stress in Drosophila melanogaster.Xie, Heng B; Cammarato, Anthony; Rajasekaran, Namakkal S; Zhang, Huali; Suggs, Jennifer A; Lin, Ho-Chen; Bernstein, Sanford I; Benjamin, Ivor J; Golic, Kent GPLoS genetics2013 June100354423818860
The Role of Aromatic-Aromatic Interactions in Strand-Strand Stabilization of ýý-Sheets.Budyak, Ivan L; Zhuravleva, Anastasia; Gierasch, Lila MJournal of molecular biology2013 Sep 233522-3523810905
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Modeling Spatial Correlation of DNA Deformation: DNA Allostery in Protein Binding.Xu, Xinliang; Ge, Hao; Gu, Chan; Gao, Yi Qin; Wang, Siyuan S; Thio, Beng Joo Reginald; Hynes, James T; Xie, X Sunney; Cao, JianshuThe journal of physical chemistry. B2013 Jul 8NULL23795567
High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells.Fu, Yanfang; Foden, Jennifer A; Khayter, Cyd; Maeder, Morgan L; Reyon, Deepak; Joung, J Keith; Sander, Jeffry DNature biotechnology2013 Jun 23NULL23792628
GABAergic lateral interactions tune the early stages of visual processing in Drosophila.Freifeld, Limor; Clark, Damon A; Schnitzer, Mark J; Horowitz, Mark A; Clandinin, Thomas RNeuron2013 Jun 191075-8923791198
A bacterial export system for generating extracellular amyloid aggregates.Sivanathan, Viknesh; Hochschild, AnnNature protocols2013 Jul1381-9023787895
Generating Better Medicines for Cancer.Dunn, Stuart S; Byrne, James D; Perry, Jillian L; Chen, Kai; Desimone, Joseph MACS macro letters2013 Apr 24393-39723772351
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Real-time Closed-loop Control in a Rodent Model of Medically Induced Coma Using Burst Suppression.Ching, Shinung; Liberman, Max Y; Chemali, Jessica J; Westover, M Brandon; Kenny, Jonathan; Solt, Ken; Purdon, Patrick L; Brown, Emery NAnesthesiology2013 Jun 13NULL23770601
Choroid-plexus-derived Otx2 homeoprotein constrains adult cortical plasticity.Spatazza, Julien; Lee, Henry H C; Di Nardo, Ariel A; Tibaldi, Lorenzo; Joliot, Alain; Hensch, Takao K; Prochiantz, AlainCell reports2013 Jun 271815-2323770240
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Microbial persistence and the road to drug resistance.Cohen, Nadia R; Lobritz, Michael A; Collins, James JCell host & microbe2013 Jun 12632-4223768488
Photoacoustic Microscopy in Tissue Engineering.Cai, Xin; Zhang, Yu Shrike; Xia, Younan; Wang, Lihong VMaterials today (Kidlington, England)2013 Mar 167-7723766667
Discovery of Cryptic Polyketide Metabolites from Dermatophytes Using Heterologous Expression in Aspergillus nidulans.Yin, Wen-Bing; Chooi, Yit Heng; Smith, Adam R; Cacho, Ralph A; Hu, Youcai; White, Theodore C; Tang, YiACS synthetic biology2013 Jun 1123758576
Computational analysis of anti-HIV-1 antibody neutralization panel data to identify potential functional epitope residues.West Jr, Anthony P; Scharf, Louise; Horwitz, Joshua; Klein, Florian; Nussenzweig, Michel C; Bjorkman, Pamela JProceedings of the National Academy of Sciences of the United States of America2013 Jun 1023754383
The cortical angiome: an interconnected vascular network with noncolumnar patterns of blood flow.Blinder, Pablo; Tsai, Philbert S; Kaufhold, John P; Knutsen, Per M; Suhl, Harry; Kleinfeld, DavidNature neuroscience2013 Jul889-9723749145
Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome.Modi, Sheetal R; Lee, Henry H; Spina, Catherine S; Collins, James JNature2013 Jun 9NULL23748443
A closed-loop anesthetic delivery system for real-time control of burst suppression.Liberman, Max Y; Ching, Shinung; Chemali, Jessica; Brown, Emery NJournal of neural engineering2013 Aug4600423744607
HCN4 dynamically marks the first heart field and conduction system precursors.Liang, Xingqun; Wang, Gang; Lin, Lizhu; Lowe, Jennifer; Zhang, Qingquan; Bu, Lei; Chen, Yihan; Chen, Ju; Sun, Yunfu; Evans, Sylvia MCirculation research2013 Aug 2399-40723743334
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Eosinophils secrete IL-4 to facilitate liver regeneration.Goh, Y P Sharon; Henderson, Neil C; Heredia, Jose E; Red Eagle, Alex; Odegaard, Justin I; Lehwald, Nadja; Nguyen, Khoa D; Sheppard, Dean; Mukundan, Lata; Locksley, Richard M; Chawla, AjayProceedings of the National Academy of Sciences of the United States of America2013 Jun 119914-923716700
A Reactive Oxygen Species (ROS)-Responsive Polymer for Safe, Efficient, and Targeted Gene Delivery in Cancer Cells.Shim, Min Suk; Xia, YounanAngewandte Chemie (International ed. in English)2013 Jul 16926-923716349
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Perfusion Imaging of Focal Cortical Dysplasia Using Arterial Spin Labeling: Correlation With Histopathological Vascular Density.Wintermark, Pia; Lechpammer, Mirna; Warfield, Simon K; Kosaras, Bela; Takeoka, Masanori; Poduri, Annapurna; Madsen, Joseph R; Bergin, Ann M; Whalen, Stephen; Jensen, Frances EJournal of child neurology2013 Nov1474-148223696629
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Sexually dimorphic neurons in the ventromedial hypothalamus govern mating in both sexes and aggression in males.Yang, Cindy F; Chiang, Michael C; Gray, Daniel C; Prabhakaran, Mahalakshmi; Alvarado, Maricruz; Juntti, Scott A; Unger, Elizabeth K; Wells, James A; Shah, Nirao MCell2013 May 9896-90923663785
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IL-7 production in murine lymphatic endothelial cells and induction in the setting of peripheral lymphopenia.Miller, Corey N; Hartigan-O'Connor, Dennis J; Lee, Myeong Sup; Laidlaw, Grace; Cornelissen, Ivo P; Matloubian, Mehrdad; Coughlin, Shaun R; McDonald, Donald M; McCune, Joseph MInternational immunology2013 Aug471-8323657000
Novel synthetic medea selfish genetic elements drive population replacement in Drosophila; a theoretical exploration of medea-dependent population suppression.Akbari, Omar S; Chen, Chun-Hong; Marshall, John M; Huang, Haixia; Antoshechkin, Igor; Hay, Bruce AACS synthetic biology.2014 Dec 19;915-2823654248
One-step generation of mice carrying mutations in multiple genes by CRISPR/Cas-mediated genome engineering.Wang, Haoyi; Yang, Hui; Shivalila, Chikdu S; Dawlaty, Meelad M; Cheng, Albert W; Zhang, Feng; Jaenisch, RudolfCell2013 May 9910-823643243
Arboretum: reconstruction and analysis of the evolutionary history of condition-specific transcriptional modules.Roy, Sushmita; Wapinski, Ilan; Pfiffner, Jenna; French, Courtney; Socha, Amanda; Konieczka, Jay; Habib, Naomi; Kellis, Manolis; Thompson, Dawn; Regev, AvivGenome research.2013 Jun;1039-5023640720
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Biomimicry enhances sequential reactions of tethered glycolytic enzymes, TPI and GAPDHS.Mukai, Chinatsu; Gao, Lizeng; Bergkvist, Magnus; Nelson, Jacquelyn L; Hinchman, Meleana M; Travis, Alexander JPloS one2013e6143423626684
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Patterns of nucleotide and haplotype diversity at ICAM-1 across global human populations with varying levels of malaria exposure.Gomez, Felicia; Tomas, Gil; Ko, Wen-Ya; Ranciaro, Alessia; Froment, Alain; Ibrahim, Muntaser; Lema, Godfrey; Nyambo, Thomas B; Omar, Sabah A; Wambebe, Charles; Hirbo, Jibril B; Rocha, Jorge; Tishkoff, Sarah AHuman genetics2013 Sep987-9923609612
Encoding through patterns: regression tree-based neuronal population models.Haslinger, Robert; Pipa, Gordon; Lewis, Laura D; Nikolic, Danko; Williams, Ziv; Brown, EmeryNeural computation2013 Aug1953-9323607564
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Photoacoustic and optical coherence tomography of epilepsy with high temporal and spatial resolution and dual optical contrasts.Tsytsarev, Vassiliy; Rao, Bin; Maslov, Konstantin I; Li, Li; Wang, Lihong VJournal of neuroscience methods2013 Jun 15142-523603664
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A real-time brain-machine interface combining motor target and trajectory intent using an optimal feedback control design.Shanechi, Maryam M; Williams, Ziv M; Wornell, Gregory W; Hu, Rollin C; Powers, Marissa; Brown, Emery NPloS one2013e5904923593130
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The Glove-like Structure of the Conserved Membrane Protein TatC Provides Insight into Signal Sequence Recognition in Twin-Arginine Translocation.Ramasamy, Sureshkumar; Abrol, Ravinder; Suloway, Christian J M; Clemons Jr, William MStructure (London, England : 1993)2013 May 7777-8823583035
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Type 2 innate signals stimulate fibro/adipogenic progenitors to facilitate muscle regeneration.Heredia, Jose E; Mukundan, Lata; Chen, Francis M; Mueller, Alisa A; Deo, Rahul C; Locksley, Richard M; Rando, Thomas A; Chawla, AjayCell2013 Apr 11376-8823582327
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Multifunctional three-dimensional macroporous nanoelectronic networks for smart materials.Liu, Jia; Xie, Chong; Dai, Xiaochuan; Jin, Lihua; Zhou, Wei; Lieber, Charles MProceedings of the National Academy of Sciences of the United States of America2013 Apr 236694-923569270
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TALEN-based Gene Correction for Epidermolysis Bullosa.Osborn, Mark J; Starker, Colby G; McElroy, Amber N; Webber, Beau R; Riddle, Megan J; Xia, Lily; Defeo, Anthony P; Gabriel, Richard; Schmidt, Manfred; Von Kalle, Christof; Carlson, Daniel F; Maeder, Morgan L; Joung, J Keith; Wagner, John E; Voytas, Daniel Molecular therapy : the journal of the American Society of Gene Therapy2013 Jun1151-923546300
Bumetanide enhances phenobarbital efficacy in a rat model of hypoxic neonatal seizures.Cleary, Ryan T; Sun, Hongyu; Huynh, Thanhthao; Manning, Simon M; Li, Yijun; Rotenberg, Alexander; Talos, Delia M; Kahle, Kristopher T; Jackson, Michele; Rakhade, Sanjay N; Berry, Gerard; Jensen, Frances EPloS one2013e5714823536761
Facile and stabile linkages through tyrosine: bioconjugation strategies with the tyrosine-click reaction.Ban, Hitoshi; Nagano, Masanobu; Gavrilyuk, Julia; Hakamata, Wataru; Inokuma, Tsubasa; Barbas 3rd, Carlos FBioconjugate chemistry2013 Apr 17520-3223534985
How bacteria survive an acid trip.Hingorani, Karan S; Gierasch, Lila MProceedings of the National Academy of Sciences of the United States of America2013 Apr 25279-8023530238
Hunger-promoting hypothalamic neurons modulate effector and regulatory T-cell responses.Matarese, Giuseppe; Procaccini, Claudio; Menale, Ciro; Kim, Jae Geun; Kim, Jung Dae; Diano, Sabrina; Diano, Nadia; De Rosa, Veronica; Dietrich, Marcelo O; Horvath, Tamas LProceedings of the National Academy of Sciences of the United States of America2013 Apr 96193-823530205
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Deciphering molecular circuits from genetic variation underlying transcriptional responsiveness to stimuli.Gat-Viks, Irit; Chevrier, Nicolas; Wilentzik, Roni; Eisenhaure, Thomas; Raychowdhury, Raktima; Steuerman, Yael; Shalek, Alex K; Hacohen, Nir; Amit, Ido; Regev, AvivNature biotechnology2013 Apr342-923503680
High-sensitivity ultrasound-modulated optical tomography with a photorefractive polymer.Suzuki, Yuta; Lai, Puxiang; Xu, Xiao; Wang, LihongOptics letters2013 Mar 15899-90123503253
Statistical mechanics of Monod-Wyman-Changeux (MWC) models.Marzen, Sarah; Garcia, Hernan G; Phillips, RobJournal of molecular biology2013 May 131433-6023499654
Altered social behavior and neuronal development in mice lacking the Uba6-Use1 ubiquitin transfer system.Lee, Peter C W; Dodart, Jean-Cosme; Aron, Liviu; Finley, Lydia W; Bronson, Roderick T; Haigis, Marcia C; Yankner, Bruce A; Harper, J WadeMolecular cell2013 Apr 25172-8423499007
Homo-dimerization and ligand binding by the leucine-rich repeat domain at RHG1/RFS2 underlying resistance to two soybean pathogens.Afzal, Ahmed J; Srour, Ali; Goil, Abhishek; Vasudaven, Sheeja; Liu, Tianyun; Samudrala, Ram; Dogra, Navneet; Kohli, Punit; Malakar, Ayan; Lightfoot, David ABMC plant biology20134323497186
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A plasmon-assisted optofluidic (PAOF) system for measuring the photothermal conversion efficiencies of gold nanostructures and controlling an electrical switch.Zeng, Jie; Goldfeld, David; Xia, YounanAngewandte Chemie (International ed. in English)2013 Apr 84169-7323494970
The fumagillin biosynthetic gene cluster in Aspergillus fumigatus encodes a cryptic terpene cyclase involved in the formation of ýý-trans-bergamotene.Lin, Hsiao-Ching; Chooi, Yit-Heng; Dhingra, Sourabh; Xu, Wei; Calvo, Ana M; Tang, YiJournal of the American Chemical Society2013 Mar 274616-923488861
Electroencephalogram signatures of loss and recovery of consciousness from propofol.Purdon, Patrick L; Pierce, Eric T; Mukamel, Eran A; Prerau, Michael J; Walsh, John L; Wong, Kin Foon K; Salazar-Gomez, Andres F; Harrell, Priscilla G; Sampson, Aaron L; Cimenser, Aylin; Ching, ShiNung; Kopell, Nancy J; Tavares-Stoeckel, Casie; Habeeb, KatProceedings of the National Academy of Sciences of the United States of America2013 Mar 19E1142-5123487781
Nanowire electrodes for high-density stimulation and measurement of neural circuits.Robinson, Jacob T; Jorgolli, Marsela; Park, HongkunFrontiers in neural circuits20133823486552
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Looking within the zebrafish to understand the tuberculous granuloma.Ramakrishnan, LalitaAdvances in experimental medicine and biology2013251-6623468113
Dynamic regulatory network controlling TH17 cell differentiation.Yosef, Nir; Shalek, Alex K; Gaublomme, Jellert T; Jin, Hulin; Lee, Youjin; Awasthi, Amit; Wu, Chuan; Karwacz, Katarzyna; Xiao, Sheng; Jorgolli, Marsela; Gennert, David; Satija, Rahul; Shakya, Arvind; Lu, Diana Y; Trombetta, John J; Pillai, Meenu R; RatcliNature2013 Apr 25461-823467089
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Beyond transposons: the epigenetic and somatic functions of the Piwi-piRNA mechanism.Peng, Jamy C; Lin, HaifanCurrent opinion in cell biology2013 Apr190-423465540
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Imaging trans-cellular neurexin-neuroligin interactions by enzymatic probe ligation.Liu, Daniel S; Loh, Ken H; Lam, Stephanie S; White, Katharine A; Ting, Alice YPloS one2013e5282323457442
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EcdGHK are three tailoring iron oxygenases for amino acid building blocks of the echinocandin scaffold.Jiang, Wei; Cacho, Ralph A; Chiou, Grace; Garg, Neil K; Tang, Yi; Walsh, Christopher TJournal of the American Chemical Society2013 Mar 204457-6623451921
Synthetic nanoelectronic probes for biological cells and tissues.Tian, Bozhi; Lieber, Charles MAnnual review of analytical chemistry (Palo Alto, Calif.)2013 Jun 1231-5123451719
Simultaneous top-down modulation of the primary somatosensory cortex and thalamic nuclei during active tactile discrimination.Pais-Vieira, Miguel; Lebedev, Mikhail A; Wiest, Michael C; Nicolelis, Miguel A LThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Feb 274076-9323447616
Identification of nonvisual photomotor response cells in the vertebrate hindbrain.Kokel, David; Dunn, Timothy W; Ahrens, Misha B; Alshut, Rudiger; Cheung, Chung Yan J; Saint-Amant, Louis; Bruni, Giancarlo; Mateus, Rita; van Ham, Tjakko J; Shiraki, Tomoya; Fukada, Yoshitaka; Kojima, Daisuke; Yeh, Jing-Ruey J; Mikut, Ralf; von Lintig, JoThe Journal of neuroscience : the official journal of the Society for Neuroscience2013 Feb 273834-4323447595
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Fungicidal drugs induce a common oxidative-damage cellular death pathway.Belenky, Peter; Camacho, Diogo; Collins, James JCell reports2013 Feb 21350-823416050
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Observation and characterization of the vestige of the jamming transition in a thermal three-dimensional system.Caswell, Thomas A; Zhang, Zexin; Gardel, Margaret L; Nagel, Sidney RPhysical review. E, Statistical, nonlinear, and soft matter physics.2013 Jan;1230323410327
The proteomic response to mutants of the Escherichia coli RNA degradosome.Zhou, Li; Zhang, Ang B; Wang, Rong; Marcotte, Edward M; Vogel, ChristineMolecular bioSystems2013 Apr 5750-723403814
Perceiving invisible light through a somatosensory cortical prosthesis.Thomson, Eric E; Carra, Rafael; Nicolelis, Miguel A LNature communications2013148223403583
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Long-term dynamics of CA1 hippocampal place codes.Ziv, Yaniv; Burns, Laurie D; Cocker, Eric D; Hamel, Elizabeth O; Ghosh, Kunal K; Kitch, Lacey J; El Gamal, Abbas; Schnitzer, Mark JNature neuroscience2013 Mar264-623396101
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AAV9 targets cone photoreceptors in the nonhuman primate retina.Vandenberghe, Luk H; Bell, Peter; Maguire, Albert M; Xiao, Ru; Hopkins, Tim B; Grant, Rebecca; Bennett, Jean; Wilson, James MPloS one2013e5346323382846
Medical school gift restriction policies and physician prescribing of newly marketed psychotropic medications: difference-in-differences analysis.King, Marissa; Essick, Connor; Bearman, Peter; Ross, Joseph SBMJ (Clinical research ed.)2013f26423372175
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Physics. Measuring mass in seconds.Debs, John E; Robins, Nicholas P; Close, John DScience (New York, N.Y.)2013 Feb 1532-323372004
Proteomic mapping of mitochondria in living cells via spatially restricted enzymatic tagging.Rhee, Hyun-Woo; Zou, Peng; Udeshi, Namrata D; Martell, Jeffrey D; Mootha, Vamsi K; Carr, Steven A; Ting, Alice YScience (New York, N.Y.)2013 Mar 151328-3123371551
Genome mining of a prenylated and immunosuppressive polyketide from pathogenic fungi.Chooi, Yit-Heng; Fang, Jinxu; Liu, Hong; Filler, Scott G; Wang, Pin; Tang, YiOrganic letters2013 Feb 15780-323368997
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RNA-guided editing of bacterial genomes using CRISPR-Cas systems.Jiang, Wenyan; Bikard, David; Cox, David; Zhang, Feng; Marraffini, Luciano ANature biotechnology2013 Mar233-923360965
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Transcriptional reprogramming of mature CD4ýýý helper T cells generates distinct MHC class II-restricted cytotoxic T lymphocytes.Mucida, Daniel; Husain, Mohammad Mushtaq; Muroi, Sawako; van Wijk, Femke; Shinnakasu, Ryo; Naoe, Yoshinori; Reis, Bernardo Sgarbi; Huang, Yujun; Lambolez, Florence; Docherty, Michael; Attinger, Antoine; Shui, Jr-Wen; Kim, Gisen; Lena, Christopher J; SakagNature immunology2013 Mar281-923334788
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Mechanistic evaluation of the pros and cons of digital RT-LAMP for HIV-1 viral load quantification on a microfluidic device and improved efficiency via a two-step digital protocol.Sun, Bing; Shen, Feng; McCalla, Stephanie E; Kreutz, Jason E; Karymov, Mikhail A; Ismagilov, Rustem FAnalytical chemistry2013 Feb 51540-623324061
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Synthesis of Ag nanocubes 18-32 nm in edge length: the effects of polyol on reduction kinetics, size control, and reproducibility.Wang, Yi; Zheng, Yiqun; Huang, Cheng Zhi; Xia, YounanJournal of the American Chemical Society2013 Feb 61941-5123317148
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Combinatorial patterning of chromatin regulators uncovered by genome-wide location analysis in human cells.Ram, Oren; Goren, Alon; Amit, Ido; Shoresh, Noam; Yosef, Nir; Ernst, Jason; Kellis, Manolis; Gymrek, Melissa; Issner, Robbyn; Coyne, Michael; Durham, Timothy; Zhang, Xiaolan; Donaghey, Julie; Epstein, Charles B; Regev, Aviv; Bernstein, Bradley ECell2011 Dec 231628-3922196736
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Comparisons of distance methods for combining covariates and abundances in microbiome studies.Fukuyama, Julia; McMurdie, Paul J; Dethlefsen, Les; Relman, David A; Holmes, SusanPacific Symposium on Biocomputing. Pacific Symposium on Biocomputing.2012;213-2422174277
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Developmental regulation of group I metabotropic glutamate receptors in the premature brain and their protective role in a rodent model of periventricular leukomalacia.Jantzie, Lauren L; Talos, Delia M; Selip, Debra B; An, Li; Jackson, Michele C; Folkerth, Rebecca D; Deng, Wenbin; Jensen, Frances ENeuron glia biology2010 Nov277-8822169210
Delivery of multiple siRNAs using lipid-coated PLGA nanoparticles for treatment of prostate cancer.Hasan, Warefta; Chu, Kevin; Gullapalli, Anuradha; Dunn, Stuart S; Enlow, Elizabeth M; Luft, J Christopher; Tian, Shaomin; Napier, Mary E; Pohlhaus, Patrick D; Rolland, Jason P; DeSimone, Joseph MNano letters2012 Jan 11287-9222165988
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Quantifying the coverage density of poly(ethylene glycol) chains on the surface of gold nanostructures.Xia, Xiaohu; Yang, Miaoxin; Wang, Yucai; Zheng, Yiqun; Li, Qingge; Chen, Jingyi; Xia, YounanACS nano2012 Jan 24512-2222148912
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Using iPSC-derived neurons to uncover cellular phenotypes associated with Timothy syndrome.Pasca, Sergiu P; Portmann, Thomas; Voineagu, Irina; Yazawa, Masayuki; Shcheglovitov, Aleksandr; Pasca, Anca M; Cord, Branden; Palmer, Theo D; Chikahisa, Sachiko; Nishino, Seiji; Bernstein, Jonathan A; Hallmayer, Joachim; Geschwind, Daniel H; Dolmetsch, Ricardo ENature medicine.2011 Dec;1657-6222120178
Single-molecule transcript counting of stem-cell markers in the mouse intestine.Itzkovitz, Shalev; Lyubimova, Anna; Blat, Irene C; Maynard, Mindy; van Es, Johan; Lees, Jacqueline; Jacks, Tyler; Clevers, Hans; van Oudenaarden, AlexanderNature cell biology2012 Jan106-1422119784
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Immune activation, CD4+ T cell counts, and viremia exhibit oscillatory patterns over time in patients with highly resistant HIV infection.Kitchen, Christina M R; Yeghiazarian, Lilit; Hoh, Rebecca; McCune, Joseph M; Sinclair, Elizabeth; Martin, Jeffrey N; Deeks, Steven GPloS one2011e2119021701594
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Integration of cell-free protein coexpression with an enzyme-linked immunosorbent assay enables rapid analysis of protein-protein interactions directly from DNA.Layton, Curtis J; Hellinga, Homme WProtein science : a publication of the Protein Society2011 Aug1432-821674663
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Effects of natural selection and gene conversion on the evolution of human glycophorins coding for MNS blood polymorphisms in malaria-endemic African populations.Ko, Wen-Ya; Kaercher, Kristin A; Giombini, Emanuela; Marcatili, Paolo; Froment, Alain; Ibrahim, Muntaser; Lema, Godfrey; Nyambo, Thomas B; Omar, Sabah A; Wambebe, Charles; Ranciaro, Alessia; Hirbo, Jibril B; Tishkoff, Sarah AAmerican journal of human genetics2011 Jun 10741-5421664997
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Risk as Social Context: Immigration Policy and Autism in California.Fountain, Christine; Bearman, PeterSociological forum (Randolph, N.J.)2011 Jun 1215-24021643443
High-fat feeding promotes obesity via insulin receptor/PI3K-dependent inhibition of SF-1 VMH neurons.Klockener, Tim; Hess, Simon; Belgardt, Bengt F; Paeger, Lars; Verhagen, Linda A W; Husch, Andreas; Sohn, Jong-Woo; Hampel, Brigitte; Dhillon, Harveen; Zigman, Jeffrey M; Lowell, Bradford B; Williams, Kevin W; Elmquist, Joel K; Horvath, Tamas L; KloppenburNature neuroscience2011 Jul911-821642975
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The clinically available NMDA receptor antagonist, memantine, exhibits relative safety in the developing rat brain.Manning, Simon M; Boll, Griffin; Fitzgerald, Erin; Selip, Debra B; Volpe, Joseph J; Jensen, Frances EInternational journal of developmental neuroscience : the official journal of the International Society for Developmental Neuroscience.2011 Nov;767-7321624454
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Involvement of adenosine A2A receptors in engulfment-dependent apoptotic cell suppression of inflammation.Koroskenyi, Krisztina; Duro, Edina; Pallai, Anna; Sarang, Zsolt; Kloor, Doris; Ucker, David S; Beceiro, Susana; Castrillo, Antonio; Chawla, Ajay; Ledent, Catherine A; Fesus, Laszlo; Szondy, ZsuzsaJournal of immunology (Baltimore, Md. : 1950)2011 Jun 157144-5521593381
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Reporting from the field: genetically encoded fluorescent reporters uncover signaling dynamics in living biological systems.Mehta, Sohum; Zhang, JinAnnual review of biochemistry2011375-40121495849
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Genes methylated by DNA methyltransferase 3b are similar in mouse intestine and human colon cancer.Steine, Eveline J; Ehrich, Mathias; Bell, George W; Raj, Arjun; Reddy, Seshamma; van Oudenaarden, Alexander; Jaenisch, Rudolf; Linhart, Heinz GThe Journal of clinical investigation2011 May1748-5221490393
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Digital isothermal quantification of nucleic acids via simultaneous chemical initiation of recombinase polymerase amplification reactions on SlipChip.Shen, Feng; Davydova, Elena K; Du, Wenbin; Kreutz, Jason E; Piepenburg, Olaf; Ismagilov, Rustem FAnalytical chemistry2011 May 13533-4021476587
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Photon counting, censor corrections, and lifetime imaging for improved detection in two-photon microscopy.Driscoll, Jonathan D; Shih, Andy Y; Iyengar, Satish; Field, Jeffrey J; White, G Allen; Squier, Jeffrey A; Cauwenberghs, Gert; Kleinfeld, DavidJournal of neurophysiology2011 Jun3106-1321471395
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Targeted mutagenesis of duplicated genes in soybean with zinc-finger nucleases.Curtin, Shaun J; Zhang, Feng; Sander, Jeffry D; Haun, William J; Starker, Colby; Baltes, Nicholas J; Reyon, Deepak; Dahlborg, Elizabeth J; Goodwin, Mathew J; Coffman, Andrew P; Dobbs, Drena; Joung, J Keith; Voytas, Daniel F; Stupar, Robert MPlant physiology2011 Jun466-7321464476
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Trpv1 reporter mice reveal highly restricted brain distribution and functional expression in arteriolar smooth muscle cells.Cavanaugh, Daniel J; Chesler, Alexander T; Jackson, Alexander C; Sigal, Yaron M; Yamanaka, Hiroki; Grant, Rebecca; O'Donnell, Dajan; Nicoll, Roger A; Shah, Nirao M; Julius, David; Basbaum, Allan IThe Journal of neuroscience : the official journal of the Society for Neuroscience2011 Mar 305067-7721451044
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Human leg model predicts ankle muscle-tendon morphology, state, roles and energetics in walking.Krishnaswamy, Pavitra; Brown, Emery N; Herr, Hugh MPLoS computational biology2011 Mare100110721445231
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A hierarchical Bayesian approach for learning sparse spatio-temporal decompositions of multichannel EEG.Wu, Wei; Chen, Zhe; Gao, Shangkai; Brown, Emery NNeuroImage2011 Jun 151929-4521420499
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A randomized, controlled trial of raltegravir intensification in antiretroviral-treated, HIV-infected patients with a suboptimal CD4+ T cell response.Hatano, Hiroyu; Hayes, Timothy L; Dahl, Viktor; Sinclair, Elizabeth; Lee, Tzong-Hae; Hoh, Rebecca; Lampiris, Harry; Hunt, Peter W; Palmer, Sarah; McCune, Joseph M; Martin, Jeffrey N; Busch, Michael P; Shacklett, Barbara L; Deeks, Steven GThe Journal of infectious diseases2011 Apr 1960-821402547
A new theranostic system based on gold nanocages and phase-change materials with unique features for photoacoustic imaging and controlled release.Moon, Geon Dae; Choi, Sung-Wook; Cai, Xin; Li, Weiyang; Cho, Eun Chul; Jeong, Unyong; Wang, Lihong V; Xia, YounanJournal of the American Chemical Society2011 Apr 64762-521401092
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Cytoplasmic intron sequence-retaining transcripts can be dendritically targeted via ID element retrotransposons.Buckley, Peter T; Lee, Miler T; Sul, Jai-Yoon; Miyashiro, Kevin Y; Bell, Thomas J; Fisher, Stephen A; Kim, Junhyong; Eberwine, JamesNeuron2011 Mar 10877-8421382548
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Drug tolerance in replicating mycobacteria mediated by a macrophage-induced efflux mechanism.Adams, Kristin N; Takaki, Kevin; Connolly, Lynn E; Wiedenhoft, Heather; Winglee, Kathryn; Humbert, Olivier; Edelstein, Paul H; Cosma, Christine L; Ramakrishnan, LalitaCell2011 Apr 139-5321376383
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Evidence from Cameroon reveals differences in the genetic structure and histories of chimpanzee populations.Gonder, Mary Katherine; Locatelli, Sabrina; Ghobrial, Lora; Mitchell, Matthew W; Kujawski, Joseph T; Lankester, Felix J; Stewart, Caro-Beth; Tishkoff, Sarah AProceedings of the National Academy of Sciences of the United States of America2011 Mar 224766-7121368170
Caenorhabditis elegans aristaless/Arx gene alr-1 restricts variable gene expression.Topalidou, Irini; van Oudenaarden, Alexander; Chalfie, MartinProceedings of the National Academy of Sciences of the United States of America2011 Mar 84063-821368126
Development of later life spontaneous seizures in a rodent model of hypoxia-induced neonatal seizures.Rakhade, Sanjay N; Klein, Peter M; Huynh, Thanthao; Hilario-Gomez, Cristina; Kosaras, Bela; Rotenberg, Alexander; Jensen, Frances EEpilepsia2011 Apr753-6521366558
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Neuropeptide Y-like signalling and nutritionally mediated gene expression and behaviour in the honey bee.Ament, S A; Velarde, R A; Kolodkin, M H; Moyse, D; Robinson, G EInsect molecular biology2011 Jun335-4521349120
Direct activation of Epac by sulfonylurea is isoform selective.Herbst, Katie J; Coltharp, Carla; Amzel, L Mario; Zhang, JinChemistry & biology2011 Feb 25243-5121338921
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Space coding by gamma oscillations in the barn owl optic tectum.Sridharan, Devarajan; Boahen, Kwabena; Knudsen, Eric IJournal of neurophysiology2011 May2005-1721325681
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A point process model for auditory neurons considering both their intrinsic dynamics and the spectrotemporal properties of an extrinsic signal.Plourde, Eric; Delgutte, Bertrand; Brown, Emery NIEEE transactions on bio-medical engineering2011 Jun1507-1021317068
Using induced pluripotent stem cells to investigate cardiac phenotypes in Timothy syndrome.Yazawa, Masayuki; Hsueh, Brian; Jia, Xiaolin; Pasca, Anca M; Bernstein, Jonathan A; Hallmayer, Joachim; Dolmetsch, Ricardo ENature2011 Mar 10230-421307850
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Considering PTSD from the perspective of brain processes: a psychological construction approach.Suvak, Michael K; Barrett, Lisa FeldmanJournal of traumatic stress2011 Feb3-2421298725
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Nanofiber membranes with controllable microwells and structural cues and their use in forming cell microarrays and neuronal networks.Xie, Jingwei; Liu, Wenying; MacEwan, Matthew R; Yeh, Yi-Chun; Thomopoulos, Stavros; Xia, YounanSmall (Weinheim an der Bergstrasse, Germany)2011 Feb 7293-721294253
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Dynamic local unfolding in the serpin ýý-1 antitrypsin provides a mechanism for loop insertion and polymerization.Krishnan, Beena; Gierasch, Lila MNature structural & molecular biology2011 Feb222-621258324
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How one bad protein spoils the barrel: structural details of ýý2-microglobulin amyloidogenicity.Gierasch, Lila MMolecular cell2011 Jan 21129-3121255721
HIV-specific CD4+ T cells may contribute to viral persistence in HIV controllers.Hunt, Peter W; Hatano, Hiroyu; Sinclair, Elizabeth; Lee, Tzong-Hae; Busch, Michael P; Martin, Jeffrey N; McCune, Joseph M; Deeks, Steven GClinical infectious diseases : an official publication of the Infectious Diseases Society of America2011 Mar 1681-721245154
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Closely spaced pregnancies are associated with increased odds of autism in California sibling births.Cheslack-Postava, Keely; Liu, Kayuet; Bearman, Peter SPediatrics2011 Feb246-5321220394
Using mechanobiological mimicry of red blood cells to extend circulation times of hydrogel microparticles.Merkel, Timothy J; Jones, Stephen W; Herlihy, Kevin P; Kersey, Farrell R; Shields, Adam R; Napier, Mary; Luft, J Christopher; Wu, Huali; Zamboni, William C; Wang, Andrew Z; Bear, James E; DeSimone, Joseph MProceedings of the National Academy of Sciences of the United States of America2011 Jan 11586-9121220299
Blinders, phenotype, and fashionable genetic analysis: a critical examination of the current state of epilepsy genetic studies.Greenberg, David A; Subaran, RyanEpilepsia2011 Jan1-921219301
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CXCR6, a newly defined biomarker of tissue-specific stem cell asymmetric self-renewal, identifies more aggressive human melanoma cancer stem cells.Taghizadeh, Rouzbeh; Noh, Minsoo; Huh, Yang Hoon; Ciusani, Emilio; Sigalotti, Luca; Maio, Michele; Arosio, Beatrice; Nicotra, Maria R; Natali, PierGiorgio; Sherley, James L; La Porta, Caterina A MPloS one2010e1518321203549
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Whole-genome molecular haplotyping of single cells.Fan, H Christina; Wang, Jianbin; Potanina, Anastasia; Quake, Stephen RNature biotechnology.2011 Jan;51-721170043
Fetal and adult hematopoietic stem cells give rise to distinct T cell lineages in humans.Mold, Jeff E; Venkatasubrahmanyam, Shivkumar; Burt, Trevor D; Michaelsson, Jakob; Rivera, Jose M; Galkina, Sofiya A; Weinberg, Kenneth; Stoddart, Cheryl A; McCune, Joseph MScience (New York, N.Y.)2010 Dec 171695-921164017
Selection-free zinc-finger-nuclease engineering by context-dependent assembly (CoDA).Sander, Jeffry D; Dahlborg, Elizabeth J; Goodwin, Mathew J; Cade, Lindsay; Zhang, Feng; Cifuentes, Daniel; Curtin, Shaun J; Blackburn, Jessica S; Thibodeau-Beganny, Stacey; Qi, Yiping; Pierick, Christopher J; Hoffman, Ellen; Maeder, Morgan L; Khayter, CydNature methods2011 Jan67-921151135
IL-4/STAT6 immune axis regulates peripheral nutrient metabolism and insulin sensitivity.Ricardo-Gonzalez, Roberto R; Red Eagle, Alex; Odegaard, Justin I; Jouihan, Hani; Morel, Christine R; Heredia, Jose E; Mukundan, Lata; Wu, Davina; Locksley, Richard M; Chawla, AjayProceedings of the National Academy of Sciences of the United States of America2010 Dec 2822617-2221149710
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Analysis of streptococcal CRISPRs from human saliva reveals substantial sequence diversity within and between subjects over time.Pride, David T; Sun, Christine L; Salzman, Julia; Rao, Nitya; Loomer, Peter; Armitage, Gary C; Banfield, Jillian F; Relman, David AGenome research2011 Jan126-3621149389
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Sustained activation of nuclear erythroid 2-related factor 2/antioxidant response element signaling promotes reductive stress in the human mutant protein aggregation cardiomyopathy in mice.Rajasekaran, Namakkal Soorappan; Varadharaj, Saradhadevi; Khanderao, Gayatri D; Davidson, Christopher J; Kannan, Sankaranarayanan; Firpo, Matthew A; Zweier, Jay L; Benjamin, Ivor JAntioxidants & redox signaling2011 Mar 15957-7121126175
IL-22+ CD4+ T cells are associated with therapeutic trichuris trichiura infection in an ulcerative colitis patient.Broadhurst, Mara J; Leung, Jacqueline M; Kashyap, Vikram; McCune, Joseph M; Mahadevan, Uma; McKerrow, James H; Loke, P'ngScience translational medicine2010 Dec 160ra8821123809
In-cell protein NMR and protein leakage.Barnes, Christopher O; Pielak, Gary JProteins2011 Feb347-5121120863
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The Yb body, a major site for Piwi-associated RNA biogenesis and a gateway for Piwi expression and transport to the nucleus in somatic cells.Qi, Hongying; Watanabe, Toshiaki; Ku, Hsueh-Yen; Liu, Na; Zhong, Mei; Lin, HaifanThe Journal of biological chemistry2011 Feb 43789-9721106531
Tunable bifunctional silyl ether cross-linkers for the design of acid-sensitive biomaterials.Parrott, Matthew C; Luft, J Chris; Byrne, James D; Fain, John H; Napier, Mary E; Desimone, Joseph MJournal of the American Chemical Society2010 Dec 2217928-3221105720
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Low-dimensional neural features predict muscle EMG signals.Rivera-Alvidrez, Zuley; Kalmar, Rachel S; Ryu, Stephen I; Shenoy, Krishna VConference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference20106027-3321097116
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Biocompatibility and Reduced Drug Absorption of Sol-Gel-Treated Poly(dimethyl siloxane) for Microfluidic Cell Culture Applications.Gomez-Sjoberg, Rafael; Leyrat, Anne A; Houseman, Benjamin T; Shokat, Kevan; Quake, Stephen RAnalytical chemistry2010 Oct 1120936785
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Nanoelectromechanical resonator arrays for ultrafast, gas-phase chromatographic chemical analysis.Li, Mo; Myers, E B; Tang, H X; Aldridge, S J; McCaig, H C; Whiting, J J; Simonson, R J; Lewis, N S; Roukes, M LNano letters2010 Oct 133899-90320795729
In vivo molecular photoacoustic tomography of melanomas targeted by bioconjugated gold nanocages.Kim, Chulhong; Cho, Eun Chul; Chen, Jingyi; Song, Kwang Hyun; Au, Leslie; Favazza, Christopher; Zhang, Qiang; Cobley, Claire M; Gao, Feng; Xia, Younan; Wang, Lihong VACS nano2010 Aug 244559-6420731439
Probing the micelle-bound aggregation-prone state of ýý-synuclein with (19)F NMR spectroscopy.Wang, Gui-Fang; Li, Conggang; Pielak, Gary JChembiochem : a European journal of chemical biology2010 Sep 241993-620730847
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Chronic label-free volumetric photoacoustic microscopy of melanoma cells in three-dimensional porous scaffolds.Zhang, Yu; Cai, Xin; Choi, Sung-Wook; Kim, Chulhong; Wang, Lihong V; Xia, YounanBiomaterials2010 Nov8651-820727581
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Towards A Fully Automated High-Throughput Phototransfection System.Cappelleri, David J; Halasz, Adam; Sul, Jai-Yoon; Kim, Tae Kyung; Eberwine, James; Kumar, VijayJALA (Charlottesville, Va.)2010 Aug 1329-34120706617
Three-dimensional, flexible nanoscale field-effect transistors as localized bioprobes.Tian, Bozhi; Cohen-Karni, Tzahi; Qing, Quan; Duan, Xiaojie; Xie, Ping; Lieber, Charles MScience (New York, N.Y.)2010 Aug 13830-420705858
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A custody battle for the mind: evidence for extensive imprinting in the brain.Tollkuhn, Jessica; Xu, Xiaohong; Shah, Nirao MNeuron2010 Aug 12359-6220696374
Radially aligned, electrospun nanofibers as dural substitutes for wound closure and tissue regeneration applications.Xie, Jingwei; Macewan, Matthew R; Ray, Wilson Z; Liu, Wenying; Siewe, Daku Y; Xia, YounanACS nano2010 Sep 285027-3620695478
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Reading chimpanzee faces: evidence for the role of verbal labels in categorical perception of emotion.Fugate, Jennifer M B; Gouzoules, Harold; Barrett, Lisa FeldmanEmotion (Washington, D.C.)2010 Aug544-5420677871
Synthetic receptors with antibody-like binding affinities.Kodadek, ThomasCurrent opinion in chemical biology2010 Dec713-2020674471
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A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response.Huarte, Maite; Guttman, Mitchell; Feldser, David; Garber, Manuel; Koziol, Magdalena J; Kenzelmann-Broz, Daniela; Khalil, Ahmad M; Zuk, Or; Amit, Ido; Rabani, Michal; Attardi, Laura D; Regev, Aviv; Lander, Eric S; Jacks, Tyler; Rinn, John LCell2010 Aug 6409-1920673990
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Quantifying E. coli proteome and transcriptome with single-molecule sensitivity in single cells.Taniguchi, Yuichi; Choi, Paul J; Li, Gene-Wei; Chen, Huiyi; Babu, Mohan; Hearn, Jeremy; Emili, Andrew; Xie, X SunneyScience (New York, N.Y.)2010 Jul 30533-820671182
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Steroid receptor coactivator-3 expression in lung cancer and its role in the regulation of cancer cell survival and proliferation.Cai, Di; Shames, David S; Raso, Maria Gabriela; Xie, Yang; Kim, Young H; Pollack, Jonathan R; Girard, Luc; Sullivan, James P; Gao, Boning; Peyton, Michael; Nanjundan, Meera; Byers, Lauren; Heymach, John; Mills, Gordon; Gazdar, Adi F; Wistuba, Ignacio; KodCancer research2010 Aug 156477-8520663904
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Genome-wide analysis reveals mechanisms modulating autophagy in normal brain aging and in Alzheimer's disease.Lipinski, Marta M; Zheng, Bin; Lu, Tao; Yan, Zhenyu; Py, Benedicte F; Ng, Aylwin; Xavier, Ramnik J; Li, Cheng; Yankner, Bruce A; Scherzer, Clemens R; Yuan, JunyingProceedings of the National Academy of Sciences of the United States of America2010 Aug 1014164-920660724
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Regulation of myeloid leukaemia by the cell-fate determinant Musashi.Ito, Takahiro; Kwon, Hyog Young; Zimdahl, Bryan; Congdon, Kendra L; Blum, Jordan; Lento, William E; Zhao, Chen; Lagoo, Anand; Gerrard, Gareth; Foroni, Letizia; Goldman, John; Goh, Harriet; Kim, Soo-Hyun; Kim, Dong-Wook; Chuah, Charles; Oehler, Vivian G; RNature2010 Aug 5765-820639863
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A forward-genetic screen and dynamic analysis of lambda phage host-dependencies reveals an extensive interaction network and a new anti-viral strategy.Maynard, Nathaniel D; Birch, Elsa W; Sanghvi, Jayodita C; Chen, Lu; Gutschow, Miriam V; Covert, Markus WPLoS genetics2010 Jule100101720628568
The role of nucleosome positioning in the evolution of gene regulation.Tsankov, Alexander M; Thompson, Dawn Anne; Socha, Amanda; Regev, Aviv; Rando, Oliver JPLoS biology2010e100041420625544
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Synthetic strategies for studying embryonic development.Ouyang, Xiaohu; Chen, James KChemistry & biology2010 Jun 25590-60620609409
Discrete time rescaling theorem: determining goodness of fit for discrete time statistical models of neural spiking.Haslinger, Robert; Pipa, Gordon; Brown, EmeryNeural computation2010 Oct2477-50620608868
Social demographic change and autism.Liu, Kayuet; Zerubavel, Noam; Bearman, PeterDemography2010 May327-4320608100
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Genetic technologies. Synthetic "life," ethics, national security, and public discourse.Cho, Mildred K; Relman, David AScience (New York, N.Y.)2010 Jul 238-920595601
Facile synthesis of Ag nanocubes of 30 to 70 nm in edge length with CF(3)COOAg as a precursor.Zhang, Qiang; Li, Weiyang; Wen, Long-Ping; Chen, Jingyi; Xia, YounanChemistry (Weinheim an der Bergstrasse, Germany)2010 Sep 310234-920593441
Older and wiser? An affective science perspective on age-related challenges in financial decision making.Weierich, Mariann R; Kensinger, Elizabeth A; Munnell, Alicia H; Sass, Steven A; Dickerson, Brad C; Wright, Christopher I; Barrett, Lisa FeldmanSocial cognitive and affective neuroscience2011 Apr195-20620587596
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Dead-end filling of SlipChip evaluated theoretically and experimentally as a function of the surface chemistry and the gap size between the plates for lubricated and dry SlipChips.Li, Liang; Karymov, Mikhail A; Nichols, Kevin P; Ismagilov, Rustem FLangmuir : the ACS journal of surfaces and colloids2010 Jul 2012465-7120575548
Engineering the genomes of wild insect populations: challenges, and opportunities provided by synthetic Medea selfish genetic elements.Hay, Bruce A; Chen, Chun-Hong; Ward, Catherine M; Huang, Haixia; Su, Jessica T; Guo, MingJournal of insect physiology2010 Oct1402-1320570677
Regulation of cell motile behavior by crosstalk between cadherin- and integrin-mediated adhesions.Borghi, Nicolas; Lowndes, Molly; Maruthamuthu, Venkat; Gardel, Margaret L; Nelson, W JamesProceedings of the National Academy of Sciences of the United States of America2010 Jul 2713324-920566866
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Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity.Willner, Dana; Furlan, Mike; Schmieder, Robert; Grasis, Juris A; Pride, David T; Relman, David A; Angly, Florent E; McDole, Tracey; Mariella Jr, Ray P; Rohwer, Forest; Haynes, MatthewProceedings of the National Academy of Sciences of the United States of America2011 Mar 154547-5320547834
Bright three-photon luminescence from gold/silver alloyed nanostructures for bioimaging with negligible photothermal toxicity.Tong, Ling; Cobley, Claire M; Chen, Jingyi; Xia, Younan; Cheng, Ji-XinAngewandte Chemie (International ed. in English)2010 May 33485-820544899
Chemical stimulation of the Arabidopsis thaliana root using multi-laminar flow on a microfluidic chip.Meier, Matthias; Lucchetta, Elena M; Ismagilov, Rustem FLab on a chip2010 Aug 212147-5320544086
Transient frictional slip between integrin and the ECM in focal adhesions under myosin II tension.Aratyn-Schaus, Yvonne; Gardel, Margaret LCurrent biology : CB2010 Jul 131145-5320541412
Roles of monkey premotor neuron classes in movement preparation and execution.Kaufman, Matthew T; Churchland, Mark M; Santhanam, Gopal; Yu, Byron M; Afshar, Afsheen; Ryu, Stephen I; Shenoy, Krishna VJournal of neurophysiology2010 Aug799-81020538784
Differential involvement of excitatory and inhibitory neurons of cat motor cortex in coincident spike activity related to behavioral context.Putrino, David; Brown, Emery N; Mastaglia, Frank L; Ghosh, SoumyaThe Journal of neuroscience : the official journal of the Society for Neuroscience2010 Jun 98048-5620534853
Regulatory and metabolic rewiring during laboratory evolution of ethanol tolerance in E. coli.Goodarzi, Hani; Bennett, Bryson D; Amini, Sasan; Reaves, Marshall L; Hottes, Alison K; Rabinowitz, Joshua D; Tavazoie, SaeedMolecular systems biology2010 Jun 837820531407
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Differential hemodynamic response in affective circuitry with aging: an FMRI study of novelty, valence, and arousal.Moriguchi, Yoshiya; Negreira, Alyson; Weierich, Mariann; Dautoff, Rebecca; Dickerson, Bradford C; Wright, Christopher I; Barrett, Lisa FeldmanJournal of cognitive neuroscience2011 May1027-4120521849
Lin28a transgenic mice manifest size and puberty phenotypes identified in human genetic association studies.Zhu, Hao; Shah, Samar; Shyh-Chang, Ng; Shinoda, Gen; Einhorn, William S; Viswanathan, Srinivas R; Takeuchi, Ayumu; Grasemann, Corinna; Rinn, John L; Lopez, Mary F; Hirschhorn, Joel N; Palmert, Mark R; Daley, George QNature genetics2010 Jul626-3020512147
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High frequency targeted mutagenesis in Arabidopsis thaliana using zinc finger nucleases.Zhang, Feng; Maeder, Morgan L; Unger-Wallace, Erica; Hoshaw, Justin P; Reyon, Deepak; Christian, Michelle; Li, Xiaohong; Pierick, Christopher J; Dobbs, Drena; Peterson, Thomas; Joung, J Keith; Voytas, Daniel FProceedings of the National Academy of Sciences of the United States of America2010 Jun 2912028-3320508152
Social influence and the autism epidemic.Liu, Ka-Yuet; King, Marissa; Bearman, Peter SAJS; American journal of sociology2010 Mar1387-43420503647
Dissolving Ag from Au-Ag Alloy Nanoboxes with H(2)O(2): A Method for Both Tailoring the Optical Properties and Measuring the H(2)O(2) Concentration.Zhang, Qiang; Cobley, Claire M; Zeng, Jie; Wen, Long-Ping; Chen, Jingyi; Xia, YounanThe journal of physical chemistry. C, Nanomaterials and interfaces2010 Mar 56396-640020495675
I Like the Sound of Your Voice: Affective Learning about Vocal Signals.Bliss-Moreau, Eliza; Barrett, Lisa Feldman; Owren, Michael JJournal of experimental social psychology.2010 May 1;557-56320495619
Establishing the design rules for DNA-mediated programmable colloidal crystallization.Macfarlane, Robert J; Jones, Matthew R; Senesi, Andrew J; Young, Kaylie L; Lee, Byeongdu; Wu, Jinsong; Mirkin, Chad AAngewandte Chemie (International ed. in English)2010 Jun 214589-9220486143
Tryptophan catabolism by indoleamine 2,3-dioxygenase 1 alters the balance of TH17 to regulatory T cells in HIV disease.Favre, David; Mold, Jeff; Hunt, Peter W; Kanwar, Bittoo; Loke, P'ng; Seu, Lillian; Barbour, Jason D; Lowe, Margaret M; Jayawardene, Anura; Aweeka, Francesca; Huang, Yong; Douek, Daniel C; Brenchley, Jason M; Martin, Jeffrey N; Hecht, Frederick M; Deeks, SScience translational medicine2010 May 1932ra3620484731
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Microbial invasion of the amniotic cavity in preeclampsia as assessed by cultivation and sequence-based methods.DiGiulio, Daniel B; Gervasi, Mariateresa; Romero, Roberto; Mazaki-Tovi, Shali; Vaisbuch, Edi; Kusanovic, Juan Pedro; Seok, Kimberley S; Gomez, Ricardo; Mittal, Pooja; Gotsch, Francesca; Chaiworapongsa, Tinnakorn; Oyarzun, Enrique; Kim, Chong Jai; Relman, Journal of perinatal medicine2010 Sep503-1320482470
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Prevalence and diversity of microbes in the amniotic fluid, the fetal inflammatory response, and pregnancy outcome in women with preterm pre-labor rupture of membranes.DiGiulio, Daniel B; Romero, Roberto; Kusanovic, Juan Pedro; Gomez, Ricardo; Kim, Chong Jai; Seok, Kimberley S; Gotsch, Francesca; Mazaki-Tovi, Shali; Vaisbuch, Edi; Sanders, Katherine; Bik, Elisabeth M; Chaiworapongsa, Tinnakorn; Oyarzun, Enrique; Relman,American journal of reproductive immunology (New York, N.Y. : 1989)2010 Jul 138-5720331587
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Seed-mediated synthesis of truncated gold decahedrons with a AuCl/oleylamine complex as precursor.Ma, Yanyun; Zeng, Jie; Li, Weiyang; McKiernan, Maureen; Xie, Zhaoxiong; Xia, YounanAdvanced materials (Deerfield Beach, Fla.)2010 May 41930-420301132
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium.Ma, Li-Jun; van der Does, H Charlotte; Borkovich, Katherine A; Coleman, Jeffrey J; Daboussi, Marie-Josee; Di Pietro, Antonio; Dufresne, Marie; Freitag, Michael; Grabherr, Manfred; Henrissat, Bernard; Houterman, Petra M; Kang, Seogchan; Shim, Won-Bo; WolosNature2010 Mar 18367-7320237561
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Fabrication of Microbeads with a Controllable Hollow Interior and Porous Wall Using a Capillary Fluidic Device.Choi, Sung-Wook; Zhang, Yu; Xia, YounanAdvanced functional materials2009 Sep 232943-294920191106
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Using point process models to compare neural spiking activity in the subthalamic nucleus of Parkinson's patients and a healthy primate.Sarma, Sridevi V; Eden, Uri T; Cheng, Ming L; Williams, Ziv M; Hu, Rollin; Eskandar, Emad; Brown, Emery NIEEE transactions on bio-medical engineering2010 Jun1297-30520172804
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Sublethal antibiotic treatment leads to multidrug resistance via radical-induced mutagenesis.Kohanski, Michael A; DePristo, Mark A; Collins, James JMolecular cell2010 Feb 12311-2020159551
Tuning the Thickness and Orientation of Single Au Pyramids for Improved Refractive Index Sensitivities.Lee, Jeunghoon; Hasan, Warefta; Odom, Teri WThe journal of physical chemistry. C, Nanomaterials and interfaces2009 Feb 122205-220720157343
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Graphene and nanowire transistors for cellular interfaces and electrical recording.Cohen-Karni, Tzahi; Qing, Quan; Li, Qiang; Fang, Ying; Lieber, Charles MNano letters2010 Mar 101098-10220136098
Nanowire transistor arrays for mapping neural circuits in acute brain slices.Qing, Quan; Pal, Sumon K; Tian, Bozhi; Duan, Xiaojie; Timko, Brian P; Cohen-Karni, Tzahi; Murthy, Venkatesh N; Lieber, Charles MProceedings of the National Academy of Sciences of the United States of America2010 Feb 21882-720133836
Nature's molecular sponges: small heat shock proteins grow into their chaperone roles.Eyles, Stephen J; Gierasch, Lila MProceedings of the National Academy of Sciences of the United States of America2010 Feb 162727-820133678
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Cytomegalovirus-specific T cells persist at very high levels during long-term antiretroviral treatment of HIV disease.Naeger, David M; Martin, Jeffrey N; Sinclair, Elizabeth; Hunt, Peter W; Bangsberg, David R; Hecht, Frederick; Hsue, Priscilla; McCune, Joseph M; Deeks, Steven GPloS one2010e888620126452
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Knockdown of Fanconi anemia genes in human embryonic stem cells reveals early developmental defects in the hematopoietic lineage.Tulpule, Asmin; Lensch, M William; Miller, Justine D; Austin, Karyn; D'Andrea, Alan; Schlaeger, Thorsten M; Shimamura, Akiko; Daley, George QBlood2010 Apr 293453-6220089964
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Vertical silicon nanowires as a universal platform for delivering biomolecules into living cells.Shalek, Alex K; Robinson, Jacob T; Karp, Ethan S; Lee, Jin Seok; Ahn, Dae-Ro; Yoon, Myung-Han; Sutton, Amy; Jorgolli, Marsela; Gertner, Rona S; Gujral, Taranjit S; MacBeath, Gavin; Yang, Eun Gyeong; Park, HongkunProceedings of the National Academy of Sciences of the United States of America2010 Feb 21870-520080678
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Multiparameter screening on SlipChip used for nanoliter protein crystallization combining free interface diffusion and microbatch methods.Li, Liang; Du, Wenbin; Ismagilov, Rustem FJournal of the American Chemical Society2010 Jan 13112-920000709
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Single-molecule study of DNA polymerization activity of HIV-1 reverse transcriptase on DNA templates.Kim, Sangjin; Schroeder, Charles M; Xie, X SunneyJournal of molecular biology2010 Feb 5995-100619968999
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Chromatin profiling by directly sequencing small quantities of immunoprecipitated DNA.Goren, Alon; Ozsolak, Fatih; Shoresh, Noam; Ku, Manching; Adli, Mazhar; Hart, Chris; Gymrek, Melissa; Zuk, Or; Regev, Aviv; Milos, Patrice M; Bernstein, Bradley ENature methods2010 Jan47-919946276
Targeting device therapy: genomics of sudden death.Frangiskakis, J Michael; London, BarryHeart failure clinics2010 Jan93-10019945065
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Identification and characterization of a small molecule inhibitor of formin-mediated actin assembly.Rizvi, Syed A; Neidt, Erin M; Cui, Jiayue; Feiger, Zach; Skau, Colleen T; Gardel, Margaret L; Kozmin, Sergey A; Kovar, David RChemistry & biology2009 Nov 251158-6819942139
Isolation of antagonists of antigen-specific autoimmune T cell proliferation.Gocke, Anne R; Udugamasooriya, D Gomika; Archer, Chase T; Lee, Jiyong; Kodadek, ThomasChemistry & biology2009 Nov 251133-919942136
Clonal expansions in ulcerative colitis identify patients with neoplasia.Salk, Jesse J; Salipante, Stephen J; Risques, Rosa Ana; Crispin, David A; Li, Lin; Bronner, Mary P; Brentnall, Teresa A; Rabinovitch, Peter S; Horwitz, Marshall S; Loeb, Lawrence AProceedings of the National Academy of Sciences of the United States of America2009 Dec 820871-619926851
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Gold nanocages covered by smart polymers for controlled release with near-infrared light.Yavuz, Mustafa S; Cheng, Yiyun; Chen, Jingyi; Cobley, Claire M; Zhang, Qiang; Rycenga, Matthew; Xie, Jingwei; Kim, Chulhong; Song, Kwang H; Schwartz, Andrea G; Wang, Lihong V; Xia, YounanNature materials2009 Dec935-919881498
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Insulin causes hyperthermia by direct inhibition of warm-sensitive neurons.Sanchez-Alavez, Manuel; Tabarean, Iustin V; Osborn, Olivia; Mitsukawa, Kayo; Schaefer, Jean; Dubins, Jeffrey; Holmberg, Kristina H; Klein, Izabella; Klaus, Joe; Gomez, Luis F; Kolb, Hartmuth; Secrest, James; Jochems, Jeanine; Myashiro, Kevin; Buckley, PetDiabetes2010 Jan43-5019846801
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High-throughput sequencing of the zebrafish antibody repertoire.Weinstein, Joshua A; Jiang, Ning; White 3rd, Richard A; Fisher, Daniel S; Quake, Stephen RScience (New York, N.Y.)2009 May 8807-1019423829
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Curvature-induced base pair "slipping" effects in DNA-nanoparticle hybridization.Hill, Haley D; Hurst, Sarah J; Mirkin, Chad ANano letters2009 Jan317-2119072317
Triple-Decker Complexes Formed via the Weak Link Approach.Jeon, You-Moon; Heo, Jungseok; Brown, Aaron M; Mirkin, Chad AOrganometallics2006 May 222729-273219060957
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Maternal alloantigens promote the development of tolerogenic fetal regulatory T cells in utero.Mold, Jeff E; Michaelsson, Jakob; Burt, Trevor D; Muench, Marcus O; Beckerman, Karen P; Busch, Michael P; Lee, Tzong-Hae; Nixon, Douglas F; McCune, Joseph MScience (New York, N.Y.)2008 Dec 51562-519056990
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Spatial localization of bacteria controls coagulation of human blood by 'quorum acting'.Kastrup, Christian J; Boedicker, James Q; Pomerantsev, Andrei P; Moayeri, Mahtab; Bian, Yao; Pompano, Rebecca R; Kline, Timothy R; Sylvestre, Patricia; Shen, Feng; Leppla, Stephen H; Tang, Wei-Jen; Ismagilov, Rustem FNature chemical biology2008 Dec742-5019031531
A new mechanism for aging: chemical "age spots" in immortal DNA strands in distributed stem cells.Sherley, James LBreast disease200837-4619029623
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Ligand-induced conformational changes in a thermophilic ribose-binding protein.Cuneo, Matthew J; Beese, Lorena S; Hellinga, Homme WBMC structural biology20085019019243
The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing.Dethlefsen, Les; Huse, Sue; Sogin, Mitchell L; Relman, David APLoS biology2008 Nov 18e28019018661
DNA-gold triangular nanoprism conjugates.Millstone, Jill E; Georganopoulou, Dimitra G; Xu, Xiaoyang; Wei, Wei; Li, Shuyou; Mirkin, Chad ASmall (Weinheim an der Bergstrasse, Germany)2008 Dec2176-8019016498
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Defined spatial structure stabilizes a synthetic multispecies bacterial community.Kim, Hyun Jung; Boedicker, James Q; Choi, Jang Wook; Ismagilov, Rustem FProceedings of the National Academy of Sciences of the United States of America2008 Nov 2518188-9319011107
Tim-3 expression defines a novel population of dysfunctional T cells with highly elevated frequencies in progressive HIV-1 infection.Jones, R Brad; Ndhlovu, Lishomwa C; Barbour, Jason D; Sheth, Prameet M; Jha, Aashish R; Long, Brian R; Wong, Jessica C; Satkunarajah, Malathy; Schweneker, Marc; Chapman, Joan M; Gyenes, Gabor; Vali, Bahareh; Hyrcza, Martin D; Yue, Feng Yun; Kovacs, Colin;The Journal of experimental medicine2008 Nov 242763-7919001139
Membrane mechanics as a probe of ion-channel gating mechanisms.Reeves, Daniel; Ursell, Tristan; Sens, Pierre; Kondev, Jane; Phillips, RobPhysical review. E, Statistical, nonlinear, and soft matter physics2008 Oct04190118999449
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The chemistrode: a droplet-based microfluidic device for stimulation and recording with high temporal, spatial, and chemical resolution.Chen, Delai; Du, Wenbin; Liu, Ying; Liu, Weishan; Kuznetsov, Andrey; Mendez, Felipe E; Philipson, Louis H; Ismagilov, Rustem FProceedings of the National Academy of Sciences of the United States of America2008 Nov 416843-818974218
Homozygous missense N629D hERG (KCNH2) potassium channel mutation causes developmental defects in the right ventricle and its outflow tract and embryonic lethality.Teng, Guo Qi; Zhao, Xian; Lees-Miller, James P; Quinn, F Russell; Li, Pin; Rancourt, Derrick E; London, Barry; Cross, James C; Duff, Henry JCirculation research2008 Dec 51483-9118948620
Constructing emotion: the experience of fear as a conceptual act.Lindquist, Kristen A; Barrett, Lisa FeldmanPsychological science2008 Sep898-90318947355
Cross-strand split tetra-Cys motifs as structure sensors in a beta-sheet protein.Krishnan, Beena; Gierasch, Lila MChemistry & biology2008 Oct 201104-1518940670
The differentiation of embryonic stem cells seeded on electrospun nanofibers into neural lineages.Xie, Jingwei; Willerth, Stephanie M; Li, Xiaoran; Macewan, Matthew R; Rader, Allison; Sakiyama-Elbert, Shelly E; Xia, YounanBiomaterials2009 Jan354-6218930315
A stochastic single-molecule event triggers phenotype switching of a bacterial cell.Choi, Paul J; Cai, Long; Frieda, Kirsten; Xie, X SunneyScience (New York, N.Y.)2008 Oct 17442-618927393
Dark-field microscopy studies of single metal nanoparticles: understanding the factors that influence the linewidth of the localized surface plasmon resonance.Hu, Min; Novo, Carolina; Funston, Alison; Wang, Haining; Staleva, Hristina; Zou, Shengli; Mulvaney, Paul; Xia, Younan; Hartland, Gregory VJournal of materials chemistry20081949-196018846243
Zinc Finger Database (ZiFDB): a repository for information on C2H2 zinc fingers and engineered zinc-finger arrays.Fu, Fengli; Sander, Jeffry D; Maeder, Morgan; Thibodeau-Beganny, Stacey; Joung, J Keith; Dobbs, Drena; Miller, Leslie; Voytas, Daniel FNucleic acids research2009 JanD279-8318812396
Activation of tyrosine kinases by mutation of the gatekeeper threonine.Azam, Mohammad; Seeliger, Markus A; Gray, Nathanael S; Kuriyan, John; Daley, George QNature structural & molecular biology2008 Oct1109-1818794843
Morphological Evolution of Single-Crystal Ag Nanospheres during the Galvanic Replacement Reaction with HAuCl(4).Kim, Mun Ho; Lu, Xianmao; Wiley, Benjamin; Lee, Eric P; Xia, YounanThe journal of physical chemistry. C, Nanomaterials and interfaces20087872-787618787649
Surface plasmon-mediated energy transfer in heterogap Au-Ag nanowires.Wei, Wei; Li, Shuzhou; Qin, Lidong; Xue, Can; Millstone, Jill E; Xu, Xiaoyang; Schatz, George C; Mirkin, Chad ANano letters2008 Oct3446-918767888
Discovery of a hepatitis C target and its pharmacological inhibitors by microfluidic affinity analysis.Einav, Shirit; Gerber, Doron; Bryson, Paul D; Sklan, Ella H; Elazar, Menashe; Maerkl, Sebastian J; Glenn, Jeffrey S; Quake, Stephen RNature biotechnology2008 Sep1019-2718758449
Individual differences in learning the affective value of others under minimal conditions.Bliss-Moreau, Eliza; Barrett, Lisa Feldman; Wright, Christopher IEmotion (Washington, D.C.)2008 Aug479-9318729580
Microbial prevalence, diversity and abundance in amniotic fluid during preterm labor: a molecular and culture-based investigation.DiGiulio, Daniel B; Romero, Roberto; Amogan, Harold P; Kusanovic, Juan Pedro; Bik, Elisabeth M; Gotsch, Francesca; Kim, Chong Jai; Erez, Offer; Edwin, Sam; Relman, David APloS one2008e305618725970
A Comparative Study of Galvanic Replacement Reactions Involving Ag Nanocubes and AuCl(2) or AuCl(4).Au, Leslie; Lu, Xianmao; Xia, YounanAdvanced materials (Deerfield Beach, Fla.)20082517-252218725963
Structural analysis of a periplasmic binding protein in the tripartite ATP-independent transporter family reveals a tetrameric assembly that may have a role in ligand transport.Cuneo, Matthew J; Changela, Anita; Miklos, Aleksandr E; Beese, Lorena S; Krueger, Joanna K; Hellinga, Homme WThe Journal of biological chemistry2008 Nov 2132812-2018723845
Disease-specific induced pluripotent stem cells.Park, In-Hyun; Arora, Natasha; Huo, Hongguang; Maherali, Nimet; Ahfeldt, Tim; Shimamura, Akiko; Lensch, M William; Cowan, Chad; Hochedlinger, Konrad; Daley, George QCell2008 Sep 5877-8618691744
Early alterations of AMPA receptors mediate synaptic potentiation induced by neonatal seizures.Rakhade, Sanjay N; Zhou, Chengwen; Aujla, Paven K; Fishman, Rachel; Sucher, Nikolaus J; Jensen, Frances EThe Journal of neuroscience : the official journal of the Society for Neuroscience2008 Aug 67979-9018685023
Motion processing streams in Drosophila are behaviorally specialized.Katsov, Alexander Y; Clandinin, Thomas RNeuron2008 Jul 31322-3518667159
Rapid "open-source" engineering of customized zinc-finger nucleases for highly efficient gene modification.Maeder, Morgan L; Thibodeau-Beganny, Stacey; Osiak, Anna; Wright, David A; Anthony, Reshma M; Eichtinger, Magdalena; Jiang, Tao; Foley, Jonathan E; Winfrey, Ronnie J; Townsend, Jeffrey A; Unger-Wallace, Erica; Sander, Jeffry D; Muller-Lerch, Felix; Fu, FeMolecular cell2008 Jul 25294-30118657511
The pharmacophore of a peptoid VEGF receptor 2 antagonist includes both side chain and main chain residues.Udugamasooriya, D Gomika; Dunham, Geoff; Ritchie, Caroline; Brekken, Rolf A; Kodadek, ThomasBioorganic & medicinal chemistry letters2008 Nov 155892-418653335
Detecting bacteria and determining their susceptibility to antibiotics by stochastic confinement in nanoliter droplets using plug-based microfluidics.Boedicker, James Q; Li, Liang; Kline, Timothy R; Ismagilov, Rustem FLab on a chip2008 Aug1265-7218651067
Gold Nanocages for Biomedical Applications.Skrabalak, Sara E; Chen, Jingyi; Au, Leslie; Lu, Xianmao; Li, Xingde; Xia, YounanAdvanced materials (Deerfield Beach, Fla.)2007 Oct 173177-318418648528
Correlated Rayleigh Scattering Spectroscopy and Scanning Electron Microscopy Studies of Au-Ag Bimetallic Nanoboxes and Nanocages.Hu, Min; Chen, Jingyi; Marquez, Manuel; Xia, Younan; Hartland, Gregory VThe journal of physical chemistry. C, Nanomaterials and interfaces200712558-1256518629346
Quantification of the benefit from integrating MEG and EEG data in minimum l2-norm estimation.Molins, A; Stufflebeam, S M; Brown, E N; Hamalainen, M SNeuroImage2008 Sep 11069-7718602485
Neural correlates of novelty and face-age effects in young and elderly adults.Wright, Christopher I; Negreira, Alyson; Gold, Andrea L; Britton, Jennifer C; Williams, Danielle; Barrett, Lisa FeldmanNeuroImage2008 Aug 15956-6818586522
Functional grouping and cortical-subcortical interactions in emotion: a meta-analysis of neuroimaging studies.Kober, Hedy; Barrett, Lisa Feldman; Joseph, Josh; Bliss-Moreau, Eliza; Lindquist, Kristen; Wager, Tor DNeuroImage2008 Aug 15998-103118579414
Gold nanocages: synthesis, properties, and applications.Skrabalak, Sara E; Chen, Jingyi; Sun, Yugang; Lu, Xianmao; Au, Leslie; Cobley, Claire M; Xia, YounanAccounts of chemical research2008 Dec1587-9518570442
Tailoring the Optical and Catalytic Properties of Gold-Silver Nanoboxes and Nanocages by Introducing Palladium.Cobley, Claire M; Campbell, Dean J; Xia, YounanAdvanced materials (Deerfield Beach, Fla.)2008 Feb748-75218568091
Zinc-finger nucleases: the next generation emerges.Cathomen, Toni; Joung, J KeithMolecular therapy : the journal of the American Society of Gene Therapy2008 Jul1200-718545224
Ras-MAPK signaling promotes trophectoderm formation from embryonic stem cells and mouse embryos.Lu, Chi-Wei; Yabuuchi, Akiko; Chen, Lingyi; Viswanathan, Srinivas; Kim, Kitai; Daley, George QNature genetics2008 Jul921-618536715
Brain correlates of autonomic modulation: combining heart rate variability with fMRI.Napadow, Vitaly; Dhond, Rupali; Conti, Giulia; Makris, Nikos; Brown, Emery N; Barbieri, RiccardoNeuroImage2008 Aug 1169-7718524629
Central memory CD8+ T cells appear to have a shorter lifespan and reduced abundance as a function of HIV disease progression.Ladell, Kristin; Hellerstein, Marc K; Cesar, Denise; Busch, Robert; Boban, Drina; McCune, Joseph MJournal of immunology (Baltimore, Md. : 1950)2008 Jun 157907-1818523254
Application of dynamic point process models to cardiovascular control.Barbieri, Riccardo; Brown, Emery NBio Systems2008 Jul-Aug120-518515000
A peptoid antagonist of VEGF receptor 2 recognizes a 'hotspot' in the extracellular domain distinct from the hormone-binding site.Udugamasooriya, D Gomika; Ritchie, Caroline; Brekken, Rolf A; Kodadek, ThomasBioorganic & medicinal chemistry2008 Jun 156338-4318501615
Rett syndrome-causing mutations in human MeCP2 result in diverse structural changes that impact folding and DNA interactions.Ghosh, Rajarshi P; Horowitz-Scherer, Rachel A; Nikitina, Tatiana; Gierasch, Lila M; Woodcock, Christopher LThe Journal of biological chemistry2008 Jul 1820523-3418499664
High-throughput evaluation of relative cell permeability between peptoids and peptides.Tan, Niclas C; Yu, Peng; Kwon, Yong-Uk; Kodadek, ThomasBioorganic & medicinal chemistry2008 Jun 15853-6118490170
Amygdala and fusiform gyrus temporal dynamics: responses to negative facial expressions.Britton, Jennifer C; Shin, Lisa M; Barrett, Lisa Feldman; Rauch, Scott L; Wright, Christopher IBMC neuroscience20084418474111
Predictive behavior within microbial genetic networks.Tagkopoulos, Ilias; Liu, Yir-Chung; Tavazoie, SaeedScience (New York, N.Y.)2008 Jun 61313-718467556
Residue-level interrogation of macromolecular crowding effects on protein stability.Charlton, Lisa M; Barnes, Christopher O; Li, Conggang; Orans, Jillian; Young, Gregory B; Pielak, Gary JJournal of the American Chemical Society2008 May 286826-3018459780
HIV-induced changes in T cell signaling pathways.Schweneker, Marc; Favre, David; Martin, Jeffrey N; Deeks, Steven G; McCune, Joseph MJournal of immunology (Baltimore, Md. : 1950)2008 May 156490-50018453567
Unexpected failure rates for modular assembly of engineered zinc fingers.Ramirez, Cherie L; Foley, Jonathan E; Wright, David A; Muller-Lerch, Felix; Rahman, Shamim H; Cornu, Tatjana I; Winfrey, Ronnie J; Sander, Jeffry D; Fu, Fengli; Townsend, Jeffrey A; Cathomen, Toni; Voytas, Daniel F; Joung, J KeithNature methods2008 May374-518446154
Differential dynamical effects of macromolecular crowding on an intrinsically disordered protein and a globular protein: implications for in-cell NMR spectroscopy.Li, Conggang; Charlton, Lisa M; Lakkavaram, Asha; Seagle, Christopher; Wang, Guifang; Young, Gregory B; Macdonald, Jeffrey M; Pielak, Gary JJournal of the American Chemical Society2008 May 216310-118419123
Delayed orexin signaling consolidates wakefulness and sleep: physiology and modeling.Diniz Behn, C G; Kopell, N; Brown, E N; Mochizuki, T; Scammell, T EJournal of neurophysiology2008 Jun3090-10318417630
The backbone structure of the thermophilic Thermoanaerobacter tengcongensis ribose binding protein is essentially identical to its mesophilic E. coli homolog.Cuneo, Matthew J; Tian, Yaji; Allert, Malin; Hellinga, Homme WBMC structural biology20082018373848
Linking microbial phylogeny to metabolic activity at the single-cell level by using enhanced element labeling-catalyzed reporter deposition fluorescence in situ hybridization (EL-FISH) and NanoSIMS.Behrens, Sebastian; Losekann, Tina; Pett-Ridge, Jennifer; Weber, Peter K; Ng, Wing-On; Stevenson, Bradley S; Hutcheon, Ian D; Relman, David A; Spormann, Alfred MApplied and environmental microbiology2008 May3143-5018359832
Comparison of zinc finger nucleases for use in gene targeting in mammalian cells.Pruett-Miller, Shondra M; Connelly, Jon P; Maeder, Morgan L; Joung, J Keith; Porteus, Matthew HMolecular therapy : the journal of the American Society of Gene Therapy2008 Apr707-1718334988
Orthogonal cross-seeding: an approach to explore protein aggregates in living cells.Hinz, Justyna; Gierasch, Lila M; Ignatova, ZoyaBiochemistry2008 Apr 84196-20018330996
Bacterial nitric-oxide synthases operate without a dedicated redox partner.Gusarov, Ivan; Starodubtseva, Marina; Wang, Zhi-Qiang; McQuade, Lindsey; Lippard, Stephen J; Stuehr, Dennis J; Nudler, EvgenyThe Journal of biological chemistry2008 May 913140-718316370
Engineering Cys2His2 zinc finger domains using a bacterial cell-based two-hybrid selection system.Thibodeau-Beganny, Stacey; Joung, J KeithMethods in molecular biology (Clifton, N.J.)2007317-3418314590
Celebrating the scientific legacy of Elkan R. Blout.Gierasch, Lila M; Deber, Charles M; Brodsky, BarbaraBiopolymers2008 May32318307218
Growth hormone enhances thymic function in HIV-1-infected adults.Napolitano, Laura A; Schmidt, Diane; Gotway, Michael B; Ameli, Niloufar; Filbert, Erin L; Ng, Myra M; Clor, Julie L; Epling, Lorrie; Sinclair, Elizabeth; Baum, Paul D; Li, Kai; Killian, Marisela Lua; Bacchetti, Peter; McCune, Joseph MThe Journal of clinical investigation2008 Mar1085-9818292808
Selective blockade of microRNA processing by Lin28.Viswanathan, Srinivas R; Daley, George Q; Gregory, Richard IScience (New York, N.Y.)2008 Apr 497-10018292307
Mechanisms of mitotic spindle assembly and function.Walczak, Claire E; Heald, RebeccaInternational review of cytology2008111-5818275887
Roles of beta-turns in protein folding: from peptide models to protein engineering.Marcelino, Anna Marie C; Gierasch, Lila MBiopolymers2008 May380-9118275088
Phylogenetic fate mapping: theoretical and experimental studies applied to the development of mouse fibroblasts.Salipante, Stephen J; Thompson, James M; Horwitz, Marshall SGenetics2008 Feb967-7718245843
Enhanced plating efficiency of trypsin-adapted human embryonic stem cells is reversible and independent of trisomy 12/17.Chan, Elayne M; Yates, Frank; Boyer, Leah F; Schlaeger, Thorsten M; Daley, George QCloning and stem cells2008 Mar107-1818241122
Analysis of between-trial and within-trial neural spiking dynamics.Czanner, Gabriela; Eden, Uri T; Wirth, Sylvia; Yanike, Marianna; Suzuki, Wendy A; Brown, Emery NJournal of neurophysiology2008 May2672-9318216233
Bacillus anthracis-derived nitric oxide is essential for pathogen virulence and survival in macrophages.Shatalin, Konstantin; Gusarov, Ivan; Avetissova, Ekaterina; Shatalina, Yelena; McQuade, Lindsey E; Lippard, Stephen J; Nudler, EvgenyProceedings of the National Academy of Sciences of the United States of America2008 Jan 221009-1318215992
Relationship between T cell activation and CD4+ T cell count in HIV-seropositive individuals with undetectable plasma HIV RNA levels in the absence of therapy.Hunt, Peter W; Brenchley, Jason; Sinclair, Elizabeth; McCune, Joseph M; Roland, Michelle; Page-Shafer, Kimberly; Hsue, Priscilla; Emu, Brinda; Krone, Melissa; Lampiris, Harry; Douek, Daniel; Martin, Jeffrey N; Deeks, Steven GThe Journal of infectious diseases2008 Jan 1126-3318171295
Facile synthesis of gold nanoparticles with narrow size distribution by using AuCl or AuBr as the precursor.Lu, Xianmao; Tuan, Hsing-Yu; Korgel, Brian A; Xia, YounanChemistry (Weinheim an der Bergstrasse, Germany)20081584-9118058964
Nanodisk codes.Qin, Lidong; Banholzer, Matthew J; Millstone, Jill E; Mirkin, Chad ANano letters2007 Dec3849-5318041858
Nano-flares: probes for transfection and mRNA detection in living cells.Seferos, Dwight S; Giljohann, David A; Hill, Haley D; Prigodich, Andrew E; Mirkin, Chad AJournal of the American Chemical Society2007 Dec 1915477-918034495
Facile synthesis of tadpole-like nanostructures consisting of Au heads and Pd tails.Camargo, Pedro H C; Xiong, Yujie; Ji, Li; Zuo, Jian M; Xia, YounanJournal of the American Chemical Society2007 Dec 1915452-318027954
DNA-binding specificity is a major determinant of the activity and toxicity of zinc-finger nucleases.Cornu, Tatjana I; Thibodeau-Beganny, Stacey; Guhl, Eva; Alwin, Stephen; Eichtinger, Magdalena; Joung, J Keith; Joung, J K; Cathomen, ToniMolecular therapy : the journal of the American Society of Gene Therapy2008 Feb352-818026168
Photoacoustic tomography of a rat cerebral cortex in vivo with au nanocages as an optical contrast agent.Yang, Xinmai; Skrabalak, Sara E; Li, Zhi-Yuan; Xia, Younan; Wang, Lihong VNano letters2007 Dec3798-80218020475
Neurotech for neuroscience: unifying concepts, organizing principles, and emerging tools.Silver, Rae; Boahen, Kwabena; Grillner, Sten; Kopell, Nancy; Olsen, Kathie LThe Journal of neuroscience : the official journal of the Society for Neuroscience2007 Oct 3111807-1917978017
Gold nanocages for cancer detection and treatment.Skrabalak, Sara E; Au, Leslie; Lu, Xianmao; Li, Xingde; Xia, YounanNanomedicine (London, England)2007 Oct657-6817976028
In vivo imaging of mucosal CD4+ T cells using single photon emission computed tomography in a murine model of colitis.Kanwar, Bittoo; Gao, Dong Wei; Hwang, Andrew B; Grenert, James P; Williams, Simon P; Franc, Benjamin; McCune, Joseph MJournal of immunological methods2008 Jan 121-3017964595
Suppression of SIV-specific CD4+ T cells by infant but not adult macaque regulatory T cells: implications for SIV disease progression.Hartigan-O'Connor, Dennis J; Abel, Kristina; McCune, Joseph MThe Journal of experimental medicine2007 Oct 292679-9217954571
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In-cell aggregation of a polyglutamine-containing chimera is a multistep process initiated by the flanking sequence.Ignatova, Zoya; Thakur, Ashwani K; Wetzel, Ronald; Gierasch, Lila MThe Journal of biological chemistry2007 Dec 1436736-4317942400
Periodate-triggered cross-linking reveals Sug2/Rpt4 as the molecular target of a peptoid inhibitor of the 19S proteasome regulatory particle.Lim, Hyun-Suk; Cai, Di; Archer, Chase T; Kodadek, ThomasJournal of the American Chemical Society2007 Oct 3112936-717929816
Nonenzymatic detection of bacterial genomic DNA using the bio bar code assay.Hill, Haley D; Vega, Rafael A; Mirkin, Chad AAnalytical chemistry2007 Dec 19218-2317927207
Effects of osmolytes on protein folding and aggregation in cells.Ignatova, Zoya; Gierasch, Lila MMethods in enzymology2007355-7217875429
Facile synthesis of Ag nanocubes and Au nanocages.Skrabalak, Sara E; Au, Leslie; Li, Xingde; Xia, YounanNature protocols20072182-9017853874
High resolution traction force microscopy based on experimental and computational advances.Sabass, Benedikt; Gardel, Margaret L; Waterman, Clare M; Schwarz, Ulrich SBiophysical journal2008 Jan 1207-2017827246
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Structure-based design of robust glucose biosensors using a Thermotoga maritima periplasmic glucose-binding protein.Tian, Yaji; Cuneo, Matthew J; Changela, Anita; Hocker, Birte; Beese, Lorena S; Hellinga, Homme WProtein science : a publication of the Protein Society2007 Oct2240-5017766373
Loss of T cell responses following long-term cryopreservation.Owen, Rachel E; Sinclair, Elizabeth; Emu, Brinda; Heitman, John W; Hirschkorn, Dale F; Epling, C Lorrie; Tan, Qi Xuan; Custer, Brian; Harris, Jeffery M; Jacobson, Mark A; McCune, Joseph M; Martin, Jeffery N; Hecht, Frederick M; Deeks, Steven G; Norris, PhJournal of immunological methods2007 Sep 3093-11517707394
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Microarray detection of duplex and triplex DNA binders with DNA-modified gold nanoparticles.Lytton-Jean, Abigail K R; Han, Min Su; Mirkin, Chad AAnalytical chemistry2007 Aug 16037-4117614366
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Profiling the DNA-binding specificities of engineered Cys2His2 zinc finger domains using a rapid cell-based method.Meng, Xiangdong; Thibodeau-Beganny, Stacey; Jiang, Tao; Joung, J Keith; Wolfe, Scot ANucleic acids research2007e8117537811
Identification of a peptoid inhibitor of the proteasome 19S regulatory particle.Lim, Hyun-Suk; Archer, Chase T; Kodadek, ThomasJournal of the American Chemical Society2007 Jun 277750-117536803
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Dynamic interconversion of amorphous microparticles and crystalline rods in salen-based homochiral infinite coordination polymers.Jeon, You-Moon; Heo, Jungseok; Mirkin, Chad AJournal of the American Chemical Society2007 Jun 207480-117523645
Fabrication of cubic nanocages and nanoframes by dealloying Au/Ag alloy nanoboxes with an aqueous etchant based on Fe(NO3)3 or NH4OH.Lu, Xianmao; Au, Leslie; McLellan, Joseph; Li, Zhi-Yuan; Marquez, Manuel; Xia, YounanNano letters2007 Jun1764-917489641
Cooperative gating and spatial organization of membrane proteins through elastic interactions.Ursell, Tristan; Huang, Kerwyn Casey; Peterson, Eric; Phillips, RobPLoS computational biology2007 Maye8117480116
Immuno gold nanocages with tailored optical properties for targeted photothermal destruction of cancer cells.Chen, Jingyi; Wang, Danling; Xi, Jiefeng; Au, Leslie; Siekkinen, Andy; Warsen, Addie; Li, Zhi-Yuan; Zhang, Hui; Xia, Younan; Li, XingdeNano letters2007 May1318-2217430005
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Vibrational response of Au-Ag nanoboxes and nanocages to ultrafast laser-induced heating.Petrova, Hristina; Lin, Chien-Hua; Hu, Min; Chen, Jingyi; Siekkinen, Andrew R; Xia, Younan; Sader, John E; Hartland, Gregory VNano letters2007 Apr1059-6317358093
Antiviral antibodies are necessary for control of simian immunodeficiency virus replication.Miller, Christopher J; Genesca, Meritxell; Abel, Kristina; Montefiori, David; Forthal, Donald; Bost, Kristen; Li, Jun; Favre, David; McCune, Joseph MJournal of virology2007 May5024-3517329327
Site-specific fluorescent labeling of poly-histidine sequences using a metal-chelating cysteine.Krishnan, Beena; Szymanska, Aneta; Gierasch, Lila MChemical biology & drug design2007 Jan31-4017313455
Measuring flux distributions for diffusion in the small-numbers limit.Seitaridou, Effrosyni; Inamdar, Mandar M; Phillips, Rob; Ghosh, Kingshuk; Dill, KenThe journal of physical chemistry. B2007 Mar 82288-9217295536
Protein fabrication automation.Cox, J Colin; Lape, Janel; Sayed, Mahmood A; Hellinga, Homme WProtein science : a publication of the Protein Society2007 Mar379-9017242375
From the test tube to the cell: exploring the folding and aggregation of a beta-clam protein.Ignatova, Zoya; Krishnan, Beena; Bombardier, Jeffrey P; Marcelino, Anna Marie C; Hong, Jiang; Gierasch, Lila MBiopolymers2007157-6317206628
Local encoding of computationally designed enzyme activity.Allert, Malin; Dwyer, Mary A; Hellinga, Homme WJournal of molecular biology2007 Feb 23945-5317196220
Human CD4+ regulatory T cells express lower levels of the IL-7 receptor alpha chain (CD127), allowing consistent identification and sorting of live cells.Hartigan-O'Connor, Dennis J; Poon, Chungkee; Sinclair, Elizabeth; McCune, Joseph MJournal of immunological methods2007 Jan 3041-5217173927
Maximizing DNA loading on a range of gold nanoparticle sizes.Hurst, Sarah J; Lytton-Jean, Abigail K R; Mirkin, Chad AAnalytical chemistry2006 Dec 158313-817165821
Supramolecular allosteric cofacial porphyrin complexes.Oliveri, Christopher G; Gianneschi, Nathan C; Nguyen, SonBinh T; Mirkin, Chad A; Stern, Charlotte L; Wawrzak, Zdzislaw; Pink, MarenJournal of the American Chemical Society2006 Dec 2016286-9617165783
Increased carotid intima-media thickness in HIV patients is associated with increased cytomegalovirus-specific T-cell responses.Hsue, Priscilla Y; Hunt, Peter W; Sinclair, Elizabeth; Bredt, Barry; Franklin, Arlana; Killian, Maudi; Hoh, Rebecca; Martin, Jeffrey N; McCune, Joseph M; Waters, David D; Deeks, Steven GAIDS (London, England)2006 Nov 282275-8317117013
Biological consequences of tightly bent DNA: the other life of a macromolecular celebrity.Garcia, Hernan G; Grayson, Paul; Han, Lin; Inamdar, Mandar; Kondev, Jane; Nelson, Philip C; Phillips, Rob; Widom, Jonathan; Wiggins, Paul ABiopolymers2007 Feb 5115-3017103419
Direct measurement of T-cell receptor repertoire diversity with AmpliCot.Baum, Paul D; McCune, Joseph MNature methods2006 Nov895-90117060913
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Cytotrophoblast induction of arterial apoptosis and lymphangiogenesis in an in vivo model of human placentation.Red-Horse, Kristy; Rivera, Jose; Schanz, Andrea; Zhou, Yan; Winn, Virginia; Kapidzic, Mirhan; Maltepe, Emin; Okazaki, Kelly; Kochman, Ronit; Vo, Kim Chi; Giudice, Linda; Erlebacher, Adrian; McCune, Joseph M; Stoddart, Cheryl A; Fisher, Susan JThe Journal of clinical investigation2006 Oct2643-5216998586
Prevalence of CXCR4 tropism among antiretroviral-treated HIV-1-infected patients with detectable viremia.Hunt, Peter W; Harrigan, P Richard; Huang, Wei; Bates, Michael; Williamson, David W; McCune, Joseph M; Price, Richard W; Spudich, Serena S; Lampiris, Harry; Hoh, Rebecca; Leigler, Teri; Martin, Jeffrey N; Deeks, Steven GThe Journal of infectious diseases2006 Oct 1926-3016960780
Separation of tricomponent protein mixtures with triblock nanorods.Oh, Byung-Keun; Park, Sungho; Millstone, Jill E; Lee, Seung Woo; Lee, Ki-Bum; Mirkin, Chad AJournal of the American Chemical Society2006 Sep 1311825-916953622
The crystal structure of a thermophilic glucose binding protein reveals adaptations that interconvert mono and di-saccharide binding sites.Cuneo, Matthew J; Changela, Anita; Warren, Joshua J; Beese, Lorena S; Hellinga, Homme WJournal of molecular biology2006 Sep 15259-7016904687
Asymmetric functionalization of gold nanoparticles with oligonucleotides.Xu, Xiaoyang; Rosi, Nathaniel L; Wang, Yuhuang; Huo, Fengwei; Mirkin, Chad AJournal of the American Chemical Society2006 Jul 269286-716848436
Binding and signaling of surface-immobilized reagentless fluorescent biosensors derived from periplasmic binding proteins.de Lorimier, Robert M; Tian, Yaji; Hellinga, Homme WProtein science : a publication of the Protein Society2006 Aug1936-4416823040
Identification of cognate ligands for the Escherichia coli phnD protein product and engineering of a reagentless fluorescent biosensor for phosphonates.Rizk, Shahir S; Cuneo, Matthew J; Hellinga, Homme WProtein science : a publication of the Protein Society2006 Jul1745-5116751609
Synthetic protein-protein interaction domains created by shuffling Cys2His2 zinc-fingers.Giesecke, Astrid V; Fang, Rui; Joung, J KeithMolecular systems biology20062006.201116732192
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Regulation of T cell responses in the developing human fetus.Michaelsson, Jakob; Mold, Jeff E; McCune, Joseph M; Nixon, Douglas FJournal of immunology (Baltimore, Md. : 1950)2006 May 155741-816670279
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A gold nanoparticle based approach for screening triplex DNA binders.Han, Min Su; Lytton-Jean, Abigail K R; Mirkin, Chad AJournal of the American Chemical Society2006 Apr 194954-516608320
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